Multiple sequence alignment - TraesCS7D01G539900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G539900 chr7D 100.000 3523 0 0 1 3523 629947130 629950652 0.000000e+00 6506.0
1 TraesCS7D01G539900 chr7D 89.261 1434 122 8 1022 2437 630304801 630306220 0.000000e+00 1766.0
2 TraesCS7D01G539900 chr7D 92.410 1054 59 6 2441 3476 617526519 617527569 0.000000e+00 1483.0
3 TraesCS7D01G539900 chr7D 83.140 344 40 7 1659 1989 629907752 629908090 7.390000e-77 298.0
4 TraesCS7D01G539900 chr7B 91.725 1438 91 10 1022 2443 733017735 733019160 0.000000e+00 1971.0
5 TraesCS7D01G539900 chr7B 89.430 1438 112 9 1022 2443 733238194 733239607 0.000000e+00 1777.0
6 TraesCS7D01G539900 chr7B 89.121 1434 119 13 1022 2443 733129330 733130738 0.000000e+00 1749.0
7 TraesCS7D01G539900 chr7B 89.121 1434 119 12 1022 2443 733162341 733163749 0.000000e+00 1749.0
8 TraesCS7D01G539900 chr7B 92.486 1038 58 7 2444 3476 585992353 585993375 0.000000e+00 1467.0
9 TraesCS7D01G539900 chr7B 82.839 472 65 5 1654 2113 733016797 733017264 3.270000e-110 409.0
10 TraesCS7D01G539900 chr7B 75.501 449 79 18 1676 2098 741985909 741986352 1.290000e-44 191.0
11 TraesCS7D01G539900 chr7B 95.833 72 3 0 878 949 733237971 733238042 2.220000e-22 117.0
12 TraesCS7D01G539900 chrUn 89.430 1438 112 9 1022 2443 219047641 219049054 0.000000e+00 1777.0
13 TraesCS7D01G539900 chrUn 94.330 1023 55 3 2444 3464 111372139 111371118 0.000000e+00 1565.0
14 TraesCS7D01G539900 chrUn 95.833 72 3 0 878 949 219047418 219047489 2.220000e-22 117.0
15 TraesCS7D01G539900 chr3D 94.080 1098 48 3 2439 3523 613613596 613614689 0.000000e+00 1652.0
16 TraesCS7D01G539900 chr3D 94.129 1039 55 4 2443 3476 536922085 536923122 0.000000e+00 1576.0
17 TraesCS7D01G539900 chr3D 86.441 59 5 3 3468 3523 21251355 21251297 1.060000e-05 62.1
18 TraesCS7D01G539900 chr4D 93.852 1041 55 5 2444 3476 455275590 455274551 0.000000e+00 1559.0
19 TraesCS7D01G539900 chr4D 93.762 1042 57 5 2443 3476 36561617 36560576 0.000000e+00 1557.0
20 TraesCS7D01G539900 chr4D 86.441 59 5 3 3468 3523 36560625 36560567 1.060000e-05 62.1
21 TraesCS7D01G539900 chr4D 85.484 62 6 3 3465 3523 398658979 398659040 1.060000e-05 62.1
22 TraesCS7D01G539900 chr2B 93.901 1033 51 6 2444 3464 794747226 794746194 0.000000e+00 1548.0
23 TraesCS7D01G539900 chr6B 93.238 1050 54 4 2444 3476 704787877 704786828 0.000000e+00 1530.0
24 TraesCS7D01G539900 chr6D 93.041 1049 57 4 2444 3476 82906270 82907318 0.000000e+00 1519.0
25 TraesCS7D01G539900 chr2D 92.762 1050 51 6 2443 3476 107869233 107870273 0.000000e+00 1495.0
26 TraesCS7D01G539900 chr2D 95.497 644 27 2 2835 3476 576925047 576924404 0.000000e+00 1027.0
27 TraesCS7D01G539900 chr2D 85.484 62 6 3 3465 3523 634133026 634133087 1.060000e-05 62.1
28 TraesCS7D01G539900 chr2D 86.441 59 5 3 3468 3523 645195659 645195717 1.060000e-05 62.1
29 TraesCS7D01G539900 chr6A 90.660 1060 71 20 2444 3476 575493460 575494518 0.000000e+00 1384.0
30 TraesCS7D01G539900 chr7A 95.979 746 17 2 1710 2443 726393711 726394455 0.000000e+00 1199.0
31 TraesCS7D01G539900 chr7A 93.208 692 43 3 1022 1713 726392720 726393407 0.000000e+00 1014.0
32 TraesCS7D01G539900 chr7A 74.454 458 92 14 1670 2104 732448941 732448486 1.300000e-39 174.0
33 TraesCS7D01G539900 chr7A 86.441 59 5 3 3468 3523 332645507 332645565 1.060000e-05 62.1
34 TraesCS7D01G539900 chr1D 93.307 762 34 4 2443 3188 22465259 22466019 0.000000e+00 1109.0
35 TraesCS7D01G539900 chr5A 83.146 89 15 0 351 439 626105343 626105431 8.110000e-12 82.4
36 TraesCS7D01G539900 chr2A 86.667 60 3 4 3468 3523 175419700 175419758 1.060000e-05 62.1
37 TraesCS7D01G539900 chr4A 86.207 58 5 3 3468 3522 436867808 436867751 3.800000e-05 60.2
38 TraesCS7D01G539900 chr4A 86.207 58 5 3 3468 3522 616105411 616105354 3.800000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G539900 chr7D 629947130 629950652 3522 False 6506.00 6506 100.0000 1 3523 1 chr7D.!!$F3 3522
1 TraesCS7D01G539900 chr7D 630304801 630306220 1419 False 1766.00 1766 89.2610 1022 2437 1 chr7D.!!$F4 1415
2 TraesCS7D01G539900 chr7D 617526519 617527569 1050 False 1483.00 1483 92.4100 2441 3476 1 chr7D.!!$F1 1035
3 TraesCS7D01G539900 chr7B 733129330 733130738 1408 False 1749.00 1749 89.1210 1022 2443 1 chr7B.!!$F2 1421
4 TraesCS7D01G539900 chr7B 733162341 733163749 1408 False 1749.00 1749 89.1210 1022 2443 1 chr7B.!!$F3 1421
5 TraesCS7D01G539900 chr7B 585992353 585993375 1022 False 1467.00 1467 92.4860 2444 3476 1 chr7B.!!$F1 1032
6 TraesCS7D01G539900 chr7B 733016797 733019160 2363 False 1190.00 1971 87.2820 1022 2443 2 chr7B.!!$F5 1421
7 TraesCS7D01G539900 chr7B 733237971 733239607 1636 False 947.00 1777 92.6315 878 2443 2 chr7B.!!$F6 1565
8 TraesCS7D01G539900 chrUn 111371118 111372139 1021 True 1565.00 1565 94.3300 2444 3464 1 chrUn.!!$R1 1020
9 TraesCS7D01G539900 chrUn 219047418 219049054 1636 False 947.00 1777 92.6315 878 2443 2 chrUn.!!$F1 1565
10 TraesCS7D01G539900 chr3D 613613596 613614689 1093 False 1652.00 1652 94.0800 2439 3523 1 chr3D.!!$F2 1084
11 TraesCS7D01G539900 chr3D 536922085 536923122 1037 False 1576.00 1576 94.1290 2443 3476 1 chr3D.!!$F1 1033
12 TraesCS7D01G539900 chr4D 455274551 455275590 1039 True 1559.00 1559 93.8520 2444 3476 1 chr4D.!!$R1 1032
13 TraesCS7D01G539900 chr4D 36560567 36561617 1050 True 809.55 1557 90.1015 2443 3523 2 chr4D.!!$R2 1080
14 TraesCS7D01G539900 chr2B 794746194 794747226 1032 True 1548.00 1548 93.9010 2444 3464 1 chr2B.!!$R1 1020
15 TraesCS7D01G539900 chr6B 704786828 704787877 1049 True 1530.00 1530 93.2380 2444 3476 1 chr6B.!!$R1 1032
16 TraesCS7D01G539900 chr6D 82906270 82907318 1048 False 1519.00 1519 93.0410 2444 3476 1 chr6D.!!$F1 1032
17 TraesCS7D01G539900 chr2D 107869233 107870273 1040 False 1495.00 1495 92.7620 2443 3476 1 chr2D.!!$F1 1033
18 TraesCS7D01G539900 chr2D 576924404 576925047 643 True 1027.00 1027 95.4970 2835 3476 1 chr2D.!!$R1 641
19 TraesCS7D01G539900 chr6A 575493460 575494518 1058 False 1384.00 1384 90.6600 2444 3476 1 chr6A.!!$F1 1032
20 TraesCS7D01G539900 chr7A 726392720 726394455 1735 False 1106.50 1199 94.5935 1022 2443 2 chr7A.!!$F2 1421
21 TraesCS7D01G539900 chr1D 22465259 22466019 760 False 1109.00 1109 93.3070 2443 3188 1 chr1D.!!$F1 745

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
397 398 0.034089 AGCAGCTTGTATTCCACCCC 60.034 55.0 0.0 0.0 0.00 4.95 F
553 554 0.103937 GAGGCAGAGTTGATCTCCGG 59.896 60.0 0.0 0.0 43.71 5.14 F
768 769 0.248012 TTTGACCTCGCTCGGCATTA 59.752 50.0 0.0 0.0 0.00 1.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1283 1362 0.378257 GCACATGCACGGTATCCTTG 59.622 55.0 0.0 0.0 41.59 3.61 R
2079 2483 0.537188 ATCGCCGAGAAGGAACACAT 59.463 50.0 0.0 0.0 45.00 3.21 R
2748 3213 0.541998 GGTGGGAAAGGAAAGGGGTG 60.542 60.0 0.0 0.0 0.00 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.689273 GCCGAACTCACTATGGATCCT 59.311 52.381 14.23 0.89 0.00 3.24
22 23 3.432326 GCCGAACTCACTATGGATCCTTT 60.432 47.826 14.23 3.02 0.00 3.11
23 24 4.770795 CCGAACTCACTATGGATCCTTTT 58.229 43.478 14.23 0.30 0.00 2.27
25 26 6.525629 CCGAACTCACTATGGATCCTTTTAT 58.474 40.000 14.23 0.00 0.00 1.40
26 27 6.647067 CCGAACTCACTATGGATCCTTTTATC 59.353 42.308 14.23 0.00 0.00 1.75
27 28 7.210174 CGAACTCACTATGGATCCTTTTATCA 58.790 38.462 14.23 0.00 0.00 2.15
29 30 7.921041 ACTCACTATGGATCCTTTTATCAGA 57.079 36.000 14.23 0.42 0.00 3.27
30 31 8.324191 ACTCACTATGGATCCTTTTATCAGAA 57.676 34.615 14.23 0.00 0.00 3.02
31 32 8.943085 ACTCACTATGGATCCTTTTATCAGAAT 58.057 33.333 14.23 0.00 0.00 2.40
32 33 9.434420 CTCACTATGGATCCTTTTATCAGAATC 57.566 37.037 14.23 0.00 0.00 2.52
33 34 8.090831 TCACTATGGATCCTTTTATCAGAATCG 58.909 37.037 14.23 0.00 0.00 3.34
34 35 8.090831 CACTATGGATCCTTTTATCAGAATCGA 58.909 37.037 14.23 0.00 0.00 3.59
37 38 6.649155 TGGATCCTTTTATCAGAATCGACAA 58.351 36.000 14.23 0.00 0.00 3.18
38 39 7.282585 TGGATCCTTTTATCAGAATCGACAAT 58.717 34.615 14.23 0.00 0.00 2.71
39 40 7.775093 TGGATCCTTTTATCAGAATCGACAATT 59.225 33.333 14.23 0.00 0.00 2.32
48 49 7.905604 ATCAGAATCGACAATTTTACAGTGA 57.094 32.000 0.00 0.00 0.00 3.41
50 51 6.009474 CAGAATCGACAATTTTACAGTGACG 58.991 40.000 0.00 0.00 32.92 4.35
51 52 3.781341 TCGACAATTTTACAGTGACGC 57.219 42.857 0.00 0.00 31.96 5.19
52 53 2.154198 TCGACAATTTTACAGTGACGCG 59.846 45.455 3.53 3.53 31.96 6.01
53 54 2.230864 GACAATTTTACAGTGACGCGC 58.769 47.619 5.73 0.00 0.00 6.86
54 55 1.871039 ACAATTTTACAGTGACGCGCT 59.129 42.857 5.73 0.00 0.00 5.92
55 56 2.233355 CAATTTTACAGTGACGCGCTG 58.767 47.619 5.73 8.54 46.11 5.18
60 61 2.967076 CAGTGACGCGCTGTGGTT 60.967 61.111 5.73 0.00 37.23 3.67
61 62 1.663388 CAGTGACGCGCTGTGGTTA 60.663 57.895 5.73 0.00 37.23 2.85
62 63 1.663702 AGTGACGCGCTGTGGTTAC 60.664 57.895 5.73 2.66 0.00 2.50
63 64 2.356553 TGACGCGCTGTGGTTACC 60.357 61.111 5.73 0.00 0.00 2.85
65 66 1.666872 GACGCGCTGTGGTTACCTT 60.667 57.895 5.73 0.00 0.00 3.50
67 68 2.726691 CGCGCTGTGGTTACCTTCG 61.727 63.158 5.56 2.15 0.00 3.79
68 69 1.666872 GCGCTGTGGTTACCTTCGT 60.667 57.895 0.00 0.00 0.00 3.85
69 70 1.226030 GCGCTGTGGTTACCTTCGTT 61.226 55.000 0.00 0.00 0.00 3.85
71 72 0.872388 GCTGTGGTTACCTTCGTTGG 59.128 55.000 2.07 0.00 0.00 3.77
73 74 2.841215 CTGTGGTTACCTTCGTTGGAA 58.159 47.619 2.07 0.00 0.00 3.53
82 83 3.793775 TTCGTTGGAAGACGCGGCA 62.794 57.895 17.71 0.00 42.50 5.69
83 84 4.072088 CGTTGGAAGACGCGGCAC 62.072 66.667 17.71 7.85 36.12 5.01
84 85 3.723348 GTTGGAAGACGCGGCACC 61.723 66.667 17.71 18.52 0.00 5.01
87 88 4.699522 GGAAGACGCGGCACCCTT 62.700 66.667 17.71 0.00 0.00 3.95
88 89 3.119096 GAAGACGCGGCACCCTTC 61.119 66.667 17.71 5.06 0.00 3.46
89 90 4.699522 AAGACGCGGCACCCTTCC 62.700 66.667 17.71 0.00 0.00 3.46
94 95 4.162690 GCGGCACCCTTCCTCGAT 62.163 66.667 0.00 0.00 0.00 3.59
95 96 2.107141 CGGCACCCTTCCTCGATC 59.893 66.667 0.00 0.00 0.00 3.69
98 99 1.443828 GCACCCTTCCTCGATCTCC 59.556 63.158 0.00 0.00 0.00 3.71
99 100 2.034048 GCACCCTTCCTCGATCTCCC 62.034 65.000 0.00 0.00 0.00 4.30
100 101 1.455959 ACCCTTCCTCGATCTCCCG 60.456 63.158 0.00 0.00 0.00 5.14
102 103 2.731374 CTTCCTCGATCTCCCGGC 59.269 66.667 0.00 0.00 0.00 6.13
103 104 2.838225 TTCCTCGATCTCCCGGCC 60.838 66.667 0.00 0.00 0.00 6.13
107 108 3.231889 CTCGATCTCCCGGCCATGG 62.232 68.421 7.63 7.63 0.00 3.66
108 109 3.550431 CGATCTCCCGGCCATGGT 61.550 66.667 14.67 0.00 0.00 3.55
110 111 3.482232 GATCTCCCGGCCATGGTGG 62.482 68.421 14.67 15.44 41.55 4.61
125 126 2.685017 TGGCGGATCCAGACTGCT 60.685 61.111 13.41 0.00 40.72 4.24
127 128 2.894387 GCGGATCCAGACTGCTGC 60.894 66.667 13.41 0.00 40.91 5.25
144 145 4.452733 CCGCGGAGTCTGTTCCCC 62.453 72.222 24.07 0.00 33.46 4.81
145 146 3.691342 CGCGGAGTCTGTTCCCCA 61.691 66.667 0.00 0.00 33.46 4.96
146 147 2.047179 GCGGAGTCTGTTCCCCAC 60.047 66.667 0.00 0.00 33.46 4.61
148 149 1.752198 CGGAGTCTGTTCCCCACAA 59.248 57.895 0.00 0.00 33.87 3.33
150 151 0.036875 GGAGTCTGTTCCCCACAAGG 59.963 60.000 0.00 0.00 33.87 3.61
151 152 0.606673 GAGTCTGTTCCCCACAAGGC 60.607 60.000 0.00 0.00 33.87 4.35
153 154 3.365265 CTGTTCCCCACAAGGCGC 61.365 66.667 0.00 0.00 33.87 6.53
218 219 2.612115 CCTCAAGGGCCTCTGGGT 60.612 66.667 6.46 0.00 34.45 4.51
219 220 2.673523 CTCAAGGGCCTCTGGGTG 59.326 66.667 6.46 0.00 34.45 4.61
220 221 2.935481 TCAAGGGCCTCTGGGTGG 60.935 66.667 6.46 0.00 34.45 4.61
221 222 4.052518 CAAGGGCCTCTGGGTGGG 62.053 72.222 6.46 0.00 34.45 4.61
227 228 3.086600 CCTCTGGGTGGGCTCTCC 61.087 72.222 0.00 0.00 0.00 3.71
251 252 4.373116 GGCAGGAACTCGCGTGGA 62.373 66.667 13.32 0.00 34.60 4.02
253 254 1.741770 GCAGGAACTCGCGTGGAAT 60.742 57.895 13.32 0.00 34.60 3.01
254 255 1.970917 GCAGGAACTCGCGTGGAATG 61.971 60.000 13.32 6.82 34.60 2.67
255 256 0.670546 CAGGAACTCGCGTGGAATGT 60.671 55.000 13.32 0.00 34.60 2.71
256 257 0.034896 AGGAACTCGCGTGGAATGTT 59.965 50.000 13.32 6.60 0.00 2.71
257 258 0.165944 GGAACTCGCGTGGAATGTTG 59.834 55.000 13.32 0.00 0.00 3.33
259 260 1.852067 AACTCGCGTGGAATGTTGGC 61.852 55.000 13.32 0.00 0.00 4.52
262 263 2.480555 GCGTGGAATGTTGGCGAG 59.519 61.111 0.00 0.00 0.00 5.03
263 264 2.480555 CGTGGAATGTTGGCGAGC 59.519 61.111 0.00 0.00 0.00 5.03
264 265 2.034879 CGTGGAATGTTGGCGAGCT 61.035 57.895 0.00 0.00 0.00 4.09
265 266 1.503542 GTGGAATGTTGGCGAGCTG 59.496 57.895 0.00 0.00 0.00 4.24
266 267 2.334946 TGGAATGTTGGCGAGCTGC 61.335 57.895 0.00 0.00 45.38 5.25
291 292 4.424711 GGGGCGGCCTGATGTTCA 62.425 66.667 28.80 0.00 0.00 3.18
292 293 2.825836 GGGCGGCCTGATGTTCAG 60.826 66.667 22.87 0.00 43.91 3.02
293 294 3.512516 GGCGGCCTGATGTTCAGC 61.513 66.667 12.87 0.00 42.98 4.26
294 295 3.512516 GCGGCCTGATGTTCAGCC 61.513 66.667 0.00 4.03 42.98 4.85
295 296 2.270205 CGGCCTGATGTTCAGCCT 59.730 61.111 0.00 0.00 42.98 4.58
296 297 2.110967 CGGCCTGATGTTCAGCCTG 61.111 63.158 0.00 0.00 42.98 4.85
298 299 1.300963 GCCTGATGTTCAGCCTGGA 59.699 57.895 0.00 0.00 42.98 3.86
299 300 1.028868 GCCTGATGTTCAGCCTGGAC 61.029 60.000 0.00 0.00 42.98 4.02
301 302 0.742281 CTGATGTTCAGCCTGGACGG 60.742 60.000 0.00 0.00 37.72 4.79
302 303 1.450312 GATGTTCAGCCTGGACGGG 60.450 63.158 0.00 0.00 0.00 5.28
316 317 2.257371 CGGGCTCGTCGTCTTGAA 59.743 61.111 0.00 0.00 0.00 2.69
317 318 2.087009 CGGGCTCGTCGTCTTGAAC 61.087 63.158 0.00 0.00 0.00 3.18
318 319 1.737008 GGGCTCGTCGTCTTGAACC 60.737 63.158 0.00 0.00 0.00 3.62
319 320 1.289380 GGCTCGTCGTCTTGAACCT 59.711 57.895 0.00 0.00 0.00 3.50
320 321 0.733223 GGCTCGTCGTCTTGAACCTC 60.733 60.000 0.00 0.00 0.00 3.85
322 323 1.066114 CTCGTCGTCTTGAACCTCGC 61.066 60.000 0.00 0.00 0.00 5.03
323 324 2.087009 CGTCGTCTTGAACCTCGCC 61.087 63.158 0.00 0.00 0.00 5.54
325 326 2.204461 TCGTCTTGAACCTCGCCCA 61.204 57.895 0.00 0.00 0.00 5.36
326 327 2.027625 CGTCTTGAACCTCGCCCAC 61.028 63.158 0.00 0.00 0.00 4.61
327 328 1.671379 GTCTTGAACCTCGCCCACC 60.671 63.158 0.00 0.00 0.00 4.61
330 331 3.842925 TTGAACCTCGCCCACCTGC 62.843 63.158 0.00 0.00 0.00 4.85
351 352 4.415332 CGGTGACCGGGACTGTCG 62.415 72.222 17.80 0.00 45.65 4.35
352 353 2.987547 GGTGACCGGGACTGTCGA 60.988 66.667 6.32 0.00 45.65 4.20
353 354 2.348888 GGTGACCGGGACTGTCGAT 61.349 63.158 6.32 0.00 45.65 3.59
354 355 1.590147 GTGACCGGGACTGTCGATT 59.410 57.895 6.32 0.00 45.65 3.34
355 356 0.458025 GTGACCGGGACTGTCGATTC 60.458 60.000 6.32 0.00 45.65 2.52
356 357 1.141234 GACCGGGACTGTCGATTCC 59.859 63.158 6.32 0.00 32.06 3.01
358 359 2.582498 CGGGACTGTCGATTCCGC 60.582 66.667 9.65 0.00 34.17 5.54
359 360 2.202892 GGGACTGTCGATTCCGCC 60.203 66.667 1.07 0.00 35.37 6.13
360 361 2.722201 GGGACTGTCGATTCCGCCT 61.722 63.158 1.07 0.00 35.37 5.52
362 363 1.227002 GACTGTCGATTCCGCCTCC 60.227 63.158 0.00 0.00 35.37 4.30
365 366 1.667154 CTGTCGATTCCGCCTCCTGA 61.667 60.000 0.00 0.00 35.37 3.86
366 367 1.254975 TGTCGATTCCGCCTCCTGAA 61.255 55.000 0.00 0.00 35.37 3.02
367 368 0.105039 GTCGATTCCGCCTCCTGAAT 59.895 55.000 0.00 0.00 34.02 2.57
368 369 0.389391 TCGATTCCGCCTCCTGAATC 59.611 55.000 0.00 0.00 42.11 2.52
369 370 2.906047 GATTCCGCCTCCTGAATCG 58.094 57.895 0.00 0.00 38.00 3.34
370 371 1.224722 GATTCCGCCTCCTGAATCGC 61.225 60.000 0.00 0.00 38.00 4.58
371 372 2.666596 ATTCCGCCTCCTGAATCGCC 62.667 60.000 0.00 0.00 0.00 5.54
373 374 4.161295 CGCCTCCTGAATCGCCCA 62.161 66.667 0.00 0.00 0.00 5.36
374 375 2.203126 GCCTCCTGAATCGCCCAG 60.203 66.667 0.00 0.00 0.00 4.45
377 378 0.471617 CCTCCTGAATCGCCCAGAAT 59.528 55.000 0.00 0.00 33.65 2.40
380 381 1.070758 TCCTGAATCGCCCAGAATAGC 59.929 52.381 0.00 0.00 33.65 2.97
382 383 2.141517 CTGAATCGCCCAGAATAGCAG 58.858 52.381 0.00 0.00 33.65 4.24
384 385 0.471617 AATCGCCCAGAATAGCAGCT 59.528 50.000 0.00 0.00 0.00 4.24
385 386 0.471617 ATCGCCCAGAATAGCAGCTT 59.528 50.000 0.00 0.00 0.00 3.74
387 388 0.745845 CGCCCAGAATAGCAGCTTGT 60.746 55.000 0.00 0.00 0.00 3.16
388 389 1.473257 CGCCCAGAATAGCAGCTTGTA 60.473 52.381 0.00 0.00 0.00 2.41
389 390 2.808202 CGCCCAGAATAGCAGCTTGTAT 60.808 50.000 0.00 0.00 0.00 2.29
390 391 3.217626 GCCCAGAATAGCAGCTTGTATT 58.782 45.455 0.00 0.00 0.00 1.89
392 393 3.817647 CCCAGAATAGCAGCTTGTATTCC 59.182 47.826 16.35 4.69 36.63 3.01
393 394 4.454678 CCAGAATAGCAGCTTGTATTCCA 58.545 43.478 16.35 0.00 36.63 3.53
394 395 4.274459 CCAGAATAGCAGCTTGTATTCCAC 59.726 45.833 16.35 0.07 36.63 4.02
396 397 2.710096 TAGCAGCTTGTATTCCACCC 57.290 50.000 0.00 0.00 0.00 4.61
397 398 0.034089 AGCAGCTTGTATTCCACCCC 60.034 55.000 0.00 0.00 0.00 4.95
398 399 1.376609 GCAGCTTGTATTCCACCCCG 61.377 60.000 0.00 0.00 0.00 5.73
399 400 1.077716 AGCTTGTATTCCACCCCGC 60.078 57.895 0.00 0.00 0.00 6.13
400 401 2.119029 GCTTGTATTCCACCCCGCC 61.119 63.158 0.00 0.00 0.00 6.13
401 402 1.301623 CTTGTATTCCACCCCGCCA 59.698 57.895 0.00 0.00 0.00 5.69
402 403 0.106719 CTTGTATTCCACCCCGCCAT 60.107 55.000 0.00 0.00 0.00 4.40
403 404 0.106918 TTGTATTCCACCCCGCCATC 60.107 55.000 0.00 0.00 0.00 3.51
406 407 2.035237 TATTCCACCCCGCCATCGTC 62.035 60.000 0.00 0.00 0.00 4.20
418 419 2.202878 ATCGTCGCCGGTGAATGG 60.203 61.111 21.49 12.30 33.95 3.16
419 420 2.717044 ATCGTCGCCGGTGAATGGA 61.717 57.895 21.49 17.34 33.95 3.41
421 422 3.195698 GTCGCCGGTGAATGGAGC 61.196 66.667 21.49 1.71 0.00 4.70
424 425 2.892425 GCCGGTGAATGGAGCTCG 60.892 66.667 7.83 0.00 0.00 5.03
425 426 2.579201 CCGGTGAATGGAGCTCGT 59.421 61.111 7.83 0.00 0.00 4.18
426 427 1.079127 CCGGTGAATGGAGCTCGTT 60.079 57.895 7.83 5.10 0.00 3.85
427 428 1.084370 CCGGTGAATGGAGCTCGTTC 61.084 60.000 18.47 18.47 40.79 3.95
428 429 1.084370 CGGTGAATGGAGCTCGTTCC 61.084 60.000 20.99 14.55 39.92 3.62
430 431 1.447838 TGAATGGAGCTCGTTCCGC 60.448 57.895 20.99 3.76 39.92 5.54
431 432 2.509336 AATGGAGCTCGTTCCGCG 60.509 61.111 7.83 0.00 40.27 6.46
446 447 2.559840 GCGAACGTCGAGGTCTGA 59.440 61.111 11.73 0.00 43.74 3.27
447 448 1.081641 GCGAACGTCGAGGTCTGAA 60.082 57.895 11.73 0.00 43.74 3.02
448 449 0.456312 GCGAACGTCGAGGTCTGAAT 60.456 55.000 11.73 0.00 43.74 2.57
449 450 1.260206 CGAACGTCGAGGTCTGAATG 58.740 55.000 11.73 0.00 43.74 2.67
450 451 1.135774 CGAACGTCGAGGTCTGAATGA 60.136 52.381 11.73 0.00 43.74 2.57
451 452 2.251893 GAACGTCGAGGTCTGAATGAC 58.748 52.381 11.73 0.00 44.63 3.06
460 461 2.408271 GTCTGAATGACCTGGATGCA 57.592 50.000 0.00 0.00 39.69 3.96
461 462 2.928334 GTCTGAATGACCTGGATGCAT 58.072 47.619 0.00 0.00 39.69 3.96
462 463 2.877168 GTCTGAATGACCTGGATGCATC 59.123 50.000 18.81 18.81 39.69 3.91
463 464 1.871676 CTGAATGACCTGGATGCATCG 59.128 52.381 20.15 9.40 0.00 3.84
465 466 0.548031 AATGACCTGGATGCATCGGT 59.452 50.000 21.94 21.94 0.00 4.69
466 467 0.107456 ATGACCTGGATGCATCGGTC 59.893 55.000 31.44 31.44 44.76 4.79
467 468 1.592669 GACCTGGATGCATCGGTCG 60.593 63.158 27.52 15.63 36.88 4.79
468 469 2.280389 CCTGGATGCATCGGTCGG 60.280 66.667 20.15 13.01 0.00 4.79
469 470 2.280389 CTGGATGCATCGGTCGGG 60.280 66.667 20.15 3.21 0.00 5.14
470 471 4.545706 TGGATGCATCGGTCGGGC 62.546 66.667 20.15 5.33 0.00 6.13
472 473 4.545706 GATGCATCGGTCGGGCCA 62.546 66.667 11.68 0.00 36.97 5.36
473 474 4.856801 ATGCATCGGTCGGGCCAC 62.857 66.667 4.39 0.37 36.97 5.01
476 477 3.461773 CATCGGTCGGGCCACTCT 61.462 66.667 4.39 0.00 36.97 3.24
477 478 3.461773 ATCGGTCGGGCCACTCTG 61.462 66.667 4.39 0.00 36.97 3.35
478 479 3.957435 ATCGGTCGGGCCACTCTGA 62.957 63.158 4.39 4.58 36.97 3.27
479 480 4.135153 CGGTCGGGCCACTCTGAG 62.135 72.222 4.39 2.45 36.97 3.35
484 485 4.459089 GGGCCACTCTGAGCGGTC 62.459 72.222 12.95 10.51 0.00 4.79
488 489 4.135153 CACTCTGAGCGGTCGGGG 62.135 72.222 21.59 21.59 35.36 5.73
490 491 3.068691 CTCTGAGCGGTCGGGGAA 61.069 66.667 18.68 0.00 29.69 3.97
491 492 3.068691 TCTGAGCGGTCGGGGAAG 61.069 66.667 22.50 8.02 0.00 3.46
492 493 4.821589 CTGAGCGGTCGGGGAAGC 62.822 72.222 15.76 0.00 0.00 3.86
504 505 2.274104 GGAAGCGCCCCATTACCA 59.726 61.111 2.29 0.00 0.00 3.25
505 506 2.119029 GGAAGCGCCCCATTACCAC 61.119 63.158 2.29 0.00 0.00 4.16
506 507 2.044352 AAGCGCCCCATTACCACC 60.044 61.111 2.29 0.00 0.00 4.61
510 511 4.434354 GCCCCATTACCACCCGCA 62.434 66.667 0.00 0.00 0.00 5.69
511 512 2.124320 CCCCATTACCACCCGCAG 60.124 66.667 0.00 0.00 0.00 5.18
512 513 2.828549 CCCATTACCACCCGCAGC 60.829 66.667 0.00 0.00 0.00 5.25
513 514 2.045438 CCATTACCACCCGCAGCA 60.045 61.111 0.00 0.00 0.00 4.41
515 516 1.447317 CCATTACCACCCGCAGCATC 61.447 60.000 0.00 0.00 0.00 3.91
516 517 0.464373 CATTACCACCCGCAGCATCT 60.464 55.000 0.00 0.00 0.00 2.90
517 518 0.179045 ATTACCACCCGCAGCATCTC 60.179 55.000 0.00 0.00 0.00 2.75
518 519 2.252072 TTACCACCCGCAGCATCTCC 62.252 60.000 0.00 0.00 0.00 3.71
529 530 3.326210 CATCTCCGCTCGCGCTTC 61.326 66.667 5.56 0.00 38.24 3.86
530 531 4.577246 ATCTCCGCTCGCGCTTCC 62.577 66.667 5.56 0.00 38.24 3.46
543 544 3.764466 CTTCCGGCGAGGCAGAGT 61.764 66.667 9.30 0.00 35.06 3.24
545 546 3.589654 TTCCGGCGAGGCAGAGTTG 62.590 63.158 9.30 0.00 40.77 3.16
546 547 4.069232 CCGGCGAGGCAGAGTTGA 62.069 66.667 9.30 0.00 0.00 3.18
547 548 2.185350 CGGCGAGGCAGAGTTGAT 59.815 61.111 0.00 0.00 0.00 2.57
548 549 1.880340 CGGCGAGGCAGAGTTGATC 60.880 63.158 0.00 0.00 0.00 2.92
549 550 1.519719 GGCGAGGCAGAGTTGATCT 59.480 57.895 0.00 0.00 39.56 2.75
550 551 0.529555 GGCGAGGCAGAGTTGATCTC 60.530 60.000 0.00 0.00 43.05 2.75
551 552 0.529555 GCGAGGCAGAGTTGATCTCC 60.530 60.000 0.00 0.00 43.71 3.71
552 553 0.248825 CGAGGCAGAGTTGATCTCCG 60.249 60.000 0.00 0.00 43.71 4.63
553 554 0.103937 GAGGCAGAGTTGATCTCCGG 59.896 60.000 0.00 0.00 43.71 5.14
554 555 1.522580 GGCAGAGTTGATCTCCGGC 60.523 63.158 0.00 0.00 43.71 6.13
555 556 1.219124 GCAGAGTTGATCTCCGGCA 59.781 57.895 0.00 0.00 43.71 5.69
556 557 0.809241 GCAGAGTTGATCTCCGGCAG 60.809 60.000 0.00 0.00 43.71 4.85
557 558 0.809241 CAGAGTTGATCTCCGGCAGC 60.809 60.000 0.00 0.00 43.71 5.25
558 559 0.975040 AGAGTTGATCTCCGGCAGCT 60.975 55.000 0.00 0.00 43.71 4.24
559 560 0.809241 GAGTTGATCTCCGGCAGCTG 60.809 60.000 10.11 10.11 37.22 4.24
560 561 2.124983 TTGATCTCCGGCAGCTGC 60.125 61.111 30.88 30.88 41.14 5.25
562 563 2.280052 GATCTCCGGCAGCTGCTC 60.280 66.667 35.82 24.65 41.70 4.26
563 564 3.805891 GATCTCCGGCAGCTGCTCC 62.806 68.421 35.82 20.65 41.70 4.70
571 572 4.767255 CAGCTGCTCCACGGGGAC 62.767 72.222 0.00 0.00 38.64 4.46
622 623 3.869272 CAGATGCAGCCGCCGAAC 61.869 66.667 0.00 0.00 37.32 3.95
651 652 4.736896 GTGGTCTGCGGTCCGGTC 62.737 72.222 14.38 0.00 0.00 4.79
664 665 3.866582 CGGTCCCCCTGGCATCTC 61.867 72.222 0.00 0.00 0.00 2.75
666 667 3.493303 GTCCCCCTGGCATCTCCC 61.493 72.222 0.00 0.00 0.00 4.30
667 668 4.843331 TCCCCCTGGCATCTCCCC 62.843 72.222 0.00 0.00 0.00 4.81
683 684 4.253257 CCCCGTACTCTCGCTCGC 62.253 72.222 0.00 0.00 0.00 5.03
684 685 4.592936 CCCGTACTCTCGCTCGCG 62.593 72.222 0.00 0.00 41.35 5.87
685 686 3.862402 CCGTACTCTCGCTCGCGT 61.862 66.667 5.77 0.00 40.74 6.01
686 687 2.349869 CGTACTCTCGCTCGCGTC 60.350 66.667 5.77 0.00 40.74 5.19
687 688 2.349869 GTACTCTCGCTCGCGTCG 60.350 66.667 5.77 11.68 40.74 5.12
688 689 4.219846 TACTCTCGCTCGCGTCGC 62.220 66.667 7.29 7.29 40.74 5.19
702 703 2.483745 TCGCGCTTCGAGTAGGTG 59.516 61.111 5.56 0.00 43.16 4.00
704 705 2.882876 GCGCTTCGAGTAGGTGGA 59.117 61.111 0.00 0.00 0.00 4.02
705 706 1.437986 GCGCTTCGAGTAGGTGGAT 59.562 57.895 0.00 0.00 0.00 3.41
706 707 0.666913 GCGCTTCGAGTAGGTGGATA 59.333 55.000 0.00 0.00 0.00 2.59
707 708 1.599916 GCGCTTCGAGTAGGTGGATAC 60.600 57.143 0.00 0.00 0.00 2.24
719 720 3.750684 TGGATACAGTGGTGGGGAT 57.249 52.632 0.00 0.00 46.17 3.85
720 721 1.979809 TGGATACAGTGGTGGGGATT 58.020 50.000 0.00 0.00 46.17 3.01
721 722 1.563879 TGGATACAGTGGTGGGGATTG 59.436 52.381 0.00 0.00 46.17 2.67
722 723 1.133792 GGATACAGTGGTGGGGATTGG 60.134 57.143 0.00 0.00 0.00 3.16
723 724 0.926293 ATACAGTGGTGGGGATTGGG 59.074 55.000 0.00 0.00 0.00 4.12
724 725 0.476808 TACAGTGGTGGGGATTGGGT 60.477 55.000 0.00 0.00 0.00 4.51
726 727 2.037208 GTGGTGGGGATTGGGTGG 59.963 66.667 0.00 0.00 0.00 4.61
727 728 3.272042 TGGTGGGGATTGGGTGGG 61.272 66.667 0.00 0.00 0.00 4.61
728 729 4.074408 GGTGGGGATTGGGTGGGG 62.074 72.222 0.00 0.00 0.00 4.96
729 730 4.074408 GTGGGGATTGGGTGGGGG 62.074 72.222 0.00 0.00 0.00 5.40
732 733 3.429580 GGGATTGGGTGGGGGAGG 61.430 72.222 0.00 0.00 0.00 4.30
733 734 4.143301 GGATTGGGTGGGGGAGGC 62.143 72.222 0.00 0.00 0.00 4.70
735 736 3.350163 ATTGGGTGGGGGAGGCAG 61.350 66.667 0.00 0.00 0.00 4.85
746 747 3.462678 GAGGCAGGGACGAGGGTC 61.463 72.222 0.00 0.00 42.66 4.46
747 748 4.316823 AGGCAGGGACGAGGGTCA 62.317 66.667 0.00 0.00 45.28 4.02
749 750 2.670148 GGCAGGGACGAGGGTCAAT 61.670 63.158 0.00 0.00 45.28 2.57
753 754 1.003118 CAGGGACGAGGGTCAATTTGA 59.997 52.381 0.00 0.00 45.28 2.69
754 755 1.003233 AGGGACGAGGGTCAATTTGAC 59.997 52.381 19.17 19.17 46.23 3.18
763 764 0.721718 GTCAATTTGACCTCGCTCGG 59.278 55.000 17.07 0.00 41.37 4.63
764 765 1.019278 TCAATTTGACCTCGCTCGGC 61.019 55.000 0.00 0.00 0.00 5.54
765 766 1.003839 AATTTGACCTCGCTCGGCA 60.004 52.632 0.00 0.00 0.00 5.69
766 767 0.392998 AATTTGACCTCGCTCGGCAT 60.393 50.000 0.00 0.00 0.00 4.40
767 768 0.392998 ATTTGACCTCGCTCGGCATT 60.393 50.000 0.00 0.00 0.00 3.56
768 769 0.248012 TTTGACCTCGCTCGGCATTA 59.752 50.000 0.00 0.00 0.00 1.90
772 773 0.532862 ACCTCGCTCGGCATTAATGG 60.533 55.000 17.02 1.65 0.00 3.16
798 799 2.944129 CCATTAATGGTGGTAGGTGGG 58.056 52.381 24.12 0.00 43.05 4.61
799 800 2.424234 CCATTAATGGTGGTAGGTGGGG 60.424 54.545 24.12 0.00 43.05 4.96
800 801 2.362797 TTAATGGTGGTAGGTGGGGA 57.637 50.000 0.00 0.00 0.00 4.81
801 802 2.362797 TAATGGTGGTAGGTGGGGAA 57.637 50.000 0.00 0.00 0.00 3.97
802 803 1.693799 AATGGTGGTAGGTGGGGAAT 58.306 50.000 0.00 0.00 0.00 3.01
804 805 0.917333 TGGTGGTAGGTGGGGAATCC 60.917 60.000 0.00 0.00 0.00 3.01
805 806 1.525442 GTGGTAGGTGGGGAATCCG 59.475 63.158 0.00 0.00 38.76 4.18
806 807 2.372074 TGGTAGGTGGGGAATCCGC 61.372 63.158 9.64 9.64 45.12 5.54
842 843 4.899239 GCTCCCGCCCGACATCAG 62.899 72.222 0.00 0.00 0.00 2.90
843 844 3.147595 CTCCCGCCCGACATCAGA 61.148 66.667 0.00 0.00 0.00 3.27
844 845 2.682136 TCCCGCCCGACATCAGAA 60.682 61.111 0.00 0.00 0.00 3.02
845 846 2.202932 CCCGCCCGACATCAGAAG 60.203 66.667 0.00 0.00 0.00 2.85
848 849 1.667154 CCGCCCGACATCAGAAGAGA 61.667 60.000 0.00 0.00 0.00 3.10
849 850 0.248825 CGCCCGACATCAGAAGAGAG 60.249 60.000 0.00 0.00 0.00 3.20
850 851 0.820871 GCCCGACATCAGAAGAGAGT 59.179 55.000 0.00 0.00 0.00 3.24
851 852 1.202359 GCCCGACATCAGAAGAGAGTC 60.202 57.143 0.00 0.00 32.47 3.36
853 854 1.407258 CCGACATCAGAAGAGAGTCCC 59.593 57.143 0.00 0.00 32.27 4.46
855 856 2.493675 CGACATCAGAAGAGAGTCCCAA 59.506 50.000 0.00 0.00 32.27 4.12
856 857 3.056536 CGACATCAGAAGAGAGTCCCAAA 60.057 47.826 0.00 0.00 32.27 3.28
857 858 4.561530 CGACATCAGAAGAGAGTCCCAAAA 60.562 45.833 0.00 0.00 32.27 2.44
858 859 5.308825 GACATCAGAAGAGAGTCCCAAAAA 58.691 41.667 0.00 0.00 30.67 1.94
860 861 5.942826 ACATCAGAAGAGAGTCCCAAAAATC 59.057 40.000 0.00 0.00 0.00 2.17
861 862 4.569943 TCAGAAGAGAGTCCCAAAAATCG 58.430 43.478 0.00 0.00 0.00 3.34
862 863 4.040461 TCAGAAGAGAGTCCCAAAAATCGT 59.960 41.667 0.00 0.00 0.00 3.73
863 864 5.245301 TCAGAAGAGAGTCCCAAAAATCGTA 59.755 40.000 0.00 0.00 0.00 3.43
864 865 5.348997 CAGAAGAGAGTCCCAAAAATCGTAC 59.651 44.000 0.00 0.00 0.00 3.67
865 866 4.203654 AGAGAGTCCCAAAAATCGTACC 57.796 45.455 0.00 0.00 0.00 3.34
866 867 3.838903 AGAGAGTCCCAAAAATCGTACCT 59.161 43.478 0.00 0.00 0.00 3.08
867 868 3.933332 GAGAGTCCCAAAAATCGTACCTG 59.067 47.826 0.00 0.00 0.00 4.00
868 869 3.007635 GAGTCCCAAAAATCGTACCTGG 58.992 50.000 0.00 0.00 0.00 4.45
869 870 2.640826 AGTCCCAAAAATCGTACCTGGA 59.359 45.455 0.00 0.00 0.00 3.86
870 871 3.265995 AGTCCCAAAAATCGTACCTGGAT 59.734 43.478 0.00 0.00 0.00 3.41
871 872 4.472108 AGTCCCAAAAATCGTACCTGGATA 59.528 41.667 0.00 0.00 0.00 2.59
872 873 5.132144 AGTCCCAAAAATCGTACCTGGATAT 59.868 40.000 0.00 0.00 0.00 1.63
873 874 5.826208 GTCCCAAAAATCGTACCTGGATATT 59.174 40.000 0.00 0.00 0.00 1.28
874 875 6.017357 GTCCCAAAAATCGTACCTGGATATTC 60.017 42.308 0.00 0.00 0.00 1.75
875 876 5.240844 CCCAAAAATCGTACCTGGATATTCC 59.759 44.000 0.00 0.00 36.96 3.01
925 926 7.948363 CGTACGTAGTTTAATTATGCTTATGCC 59.052 37.037 7.22 0.00 37.78 4.40
949 950 6.312918 CCGAGTACTAGTACGTGTAGGTTTAA 59.687 42.308 23.87 0.00 40.80 1.52
950 951 7.011482 CCGAGTACTAGTACGTGTAGGTTTAAT 59.989 40.741 23.87 5.05 40.80 1.40
951 952 8.391106 CGAGTACTAGTACGTGTAGGTTTAATT 58.609 37.037 23.87 4.64 40.80 1.40
952 953 9.709600 GAGTACTAGTACGTGTAGGTTTAATTC 57.290 37.037 23.87 9.64 40.80 2.17
966 992 9.070149 GTAGGTTTAATTCTTACTACACGTGAG 57.930 37.037 25.01 17.03 33.04 3.51
967 993 6.589139 AGGTTTAATTCTTACTACACGTGAGC 59.411 38.462 25.01 3.79 0.00 4.26
973 999 7.578310 ATTCTTACTACACGTGAGCCTATAA 57.422 36.000 25.01 9.10 0.00 0.98
979 1005 6.505272 ACTACACGTGAGCCTATAAAAGATC 58.495 40.000 25.01 0.00 0.00 2.75
983 1009 5.975344 CACGTGAGCCTATAAAAGATCGTAA 59.025 40.000 10.90 0.00 0.00 3.18
984 1010 5.975939 ACGTGAGCCTATAAAAGATCGTAAC 59.024 40.000 0.00 0.00 0.00 2.50
985 1011 5.401674 CGTGAGCCTATAAAAGATCGTAACC 59.598 44.000 0.00 0.00 0.00 2.85
987 1013 6.929606 GTGAGCCTATAAAAGATCGTAACCAT 59.070 38.462 0.00 0.00 0.00 3.55
988 1014 6.929049 TGAGCCTATAAAAGATCGTAACCATG 59.071 38.462 0.00 0.00 0.00 3.66
989 1015 6.231211 AGCCTATAAAAGATCGTAACCATGG 58.769 40.000 11.19 11.19 0.00 3.66
991 1017 6.708949 GCCTATAAAAGATCGTAACCATGGAA 59.291 38.462 21.47 2.58 0.00 3.53
994 1020 9.712305 CTATAAAAGATCGTAACCATGGAAGAT 57.288 33.333 21.47 16.06 0.00 2.40
995 1021 8.980481 ATAAAAGATCGTAACCATGGAAGATT 57.020 30.769 21.47 4.43 0.00 2.40
996 1022 6.683974 AAAGATCGTAACCATGGAAGATTG 57.316 37.500 21.47 2.88 0.00 2.67
997 1023 4.130118 AGATCGTAACCATGGAAGATTGC 58.870 43.478 21.47 4.70 0.00 3.56
1004 1071 4.508551 ACCATGGAAGATTGCTACATCA 57.491 40.909 21.47 0.00 0.00 3.07
1005 1072 4.202441 ACCATGGAAGATTGCTACATCAC 58.798 43.478 21.47 0.00 0.00 3.06
1226 1305 1.944035 CCATGGATCAACATCGGCG 59.056 57.895 5.56 0.00 0.00 6.46
1227 1306 0.532640 CCATGGATCAACATCGGCGA 60.533 55.000 13.87 13.87 0.00 5.54
1368 1447 1.376037 GCTTCCTCGGTGACCCTTG 60.376 63.158 0.00 0.00 0.00 3.61
1565 1647 5.296531 GGTCCACTCAAAATTGCATGTTTTT 59.703 36.000 7.40 3.02 0.00 1.94
1629 1714 2.097629 CAGAAGGAGATTACTCGCACGA 59.902 50.000 0.00 0.00 43.44 4.35
1630 1715 2.097791 AGAAGGAGATTACTCGCACGAC 59.902 50.000 0.00 0.00 43.44 4.34
1668 1753 3.217626 GGGATGATGATTGGGACTTCAC 58.782 50.000 0.00 0.00 0.00 3.18
2079 2483 4.476113 AGATCAGATGTTCCAAGGGAATCA 59.524 41.667 0.38 2.47 44.04 2.57
2190 2603 4.405680 TGCTCCTAGCTATTGTGTGTATGT 59.594 41.667 0.00 0.00 42.97 2.29
2191 2604 5.104941 TGCTCCTAGCTATTGTGTGTATGTT 60.105 40.000 0.00 0.00 42.97 2.71
2194 2607 8.304596 GCTCCTAGCTATTGTGTGTATGTTATA 58.695 37.037 0.00 0.00 38.45 0.98
2205 2618 6.055588 GTGTGTATGTTATAATGAGCAGGGT 58.944 40.000 0.00 0.00 0.00 4.34
2416 2832 9.261035 AGTGAATATACTATGGGTCATCCTTAG 57.739 37.037 0.00 0.00 44.47 2.18
2448 2864 4.101448 CCCAACTCAGAGGGGCCG 62.101 72.222 1.53 0.00 41.58 6.13
2514 2930 4.982295 CGATGTAGTTCGAATGAATGGCTA 59.018 41.667 0.00 0.00 41.62 3.93
2530 2946 1.536072 GGCTATGATGCGACGTCTTCA 60.536 52.381 14.70 13.67 0.00 3.02
2532 2948 2.034507 GCTATGATGCGACGTCTTCAAC 60.035 50.000 14.70 10.44 0.00 3.18
2562 2978 1.660560 GCTCCAATGCGACATGGCTT 61.661 55.000 0.00 0.00 36.62 4.35
2596 3012 3.552068 GGAATGAAAAACACGAGGGGTTG 60.552 47.826 0.00 0.00 0.00 3.77
2786 3251 1.905215 CCTTCTTCTTCCTCTGCTCCA 59.095 52.381 0.00 0.00 0.00 3.86
2798 3263 3.044305 GCTCCAGCAACGAAGCGT 61.044 61.111 0.00 0.00 43.97 5.07
2960 3425 4.922026 ACCGTGGGCGCGAGTTTT 62.922 61.111 12.10 0.00 36.67 2.43
3038 3507 3.956199 TCGTATGGTCTAATTTCTCCCGT 59.044 43.478 0.00 0.00 0.00 5.28
3188 3708 1.076549 GAGGCATCAACCCCAACCA 59.923 57.895 0.00 0.00 0.00 3.67
3368 3891 4.098349 TGATGGCTGGAGCATTTTATTGTC 59.902 41.667 0.20 0.00 44.36 3.18
3406 3929 9.874205 ATGGGTTTATTTTACTTGATGTTCATG 57.126 29.630 0.00 0.00 0.00 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.408182 AAAGGATCCATAGTGAGTTCGG 57.592 45.455 15.82 0.00 0.00 4.30
2 3 7.210174 TGATAAAAGGATCCATAGTGAGTTCG 58.790 38.462 15.82 0.00 0.00 3.95
4 5 8.324191 TCTGATAAAAGGATCCATAGTGAGTT 57.676 34.615 15.82 0.00 0.00 3.01
5 6 7.921041 TCTGATAAAAGGATCCATAGTGAGT 57.079 36.000 15.82 0.00 0.00 3.41
6 7 9.434420 GATTCTGATAAAAGGATCCATAGTGAG 57.566 37.037 15.82 1.49 0.00 3.51
8 9 8.090831 TCGATTCTGATAAAAGGATCCATAGTG 58.909 37.037 15.82 0.00 29.37 2.74
12 13 6.830912 TGTCGATTCTGATAAAAGGATCCAT 58.169 36.000 15.82 0.00 29.37 3.41
13 14 6.233905 TGTCGATTCTGATAAAAGGATCCA 57.766 37.500 15.82 0.00 29.37 3.41
14 15 7.736447 ATTGTCGATTCTGATAAAAGGATCC 57.264 36.000 2.48 2.48 29.37 3.36
22 23 9.430623 TCACTGTAAAATTGTCGATTCTGATAA 57.569 29.630 0.00 0.00 0.00 1.75
23 24 8.869897 GTCACTGTAAAATTGTCGATTCTGATA 58.130 33.333 0.00 0.00 0.00 2.15
25 26 6.128929 CGTCACTGTAAAATTGTCGATTCTGA 60.129 38.462 0.00 0.00 0.00 3.27
26 27 6.009474 CGTCACTGTAAAATTGTCGATTCTG 58.991 40.000 0.00 0.00 0.00 3.02
27 28 5.389516 GCGTCACTGTAAAATTGTCGATTCT 60.390 40.000 0.00 0.00 0.00 2.40
29 30 4.665645 CGCGTCACTGTAAAATTGTCGATT 60.666 41.667 0.00 0.00 0.00 3.34
30 31 3.181534 CGCGTCACTGTAAAATTGTCGAT 60.182 43.478 0.00 0.00 0.00 3.59
31 32 2.154198 CGCGTCACTGTAAAATTGTCGA 59.846 45.455 0.00 0.00 0.00 4.20
32 33 2.482235 CGCGTCACTGTAAAATTGTCG 58.518 47.619 0.00 0.00 0.00 4.35
33 34 2.096417 AGCGCGTCACTGTAAAATTGTC 60.096 45.455 8.43 0.00 0.00 3.18
34 35 1.871039 AGCGCGTCACTGTAAAATTGT 59.129 42.857 8.43 0.00 0.00 2.71
37 38 1.194547 CACAGCGCGTCACTGTAAAAT 59.805 47.619 15.89 0.00 46.44 1.82
38 39 0.579630 CACAGCGCGTCACTGTAAAA 59.420 50.000 15.89 0.00 46.44 1.52
39 40 1.218875 CCACAGCGCGTCACTGTAAA 61.219 55.000 15.89 0.00 46.44 2.01
41 42 2.049526 CCACAGCGCGTCACTGTA 60.050 61.111 15.89 0.00 46.44 2.74
43 44 1.663388 TAACCACAGCGCGTCACTG 60.663 57.895 8.43 9.49 41.08 3.66
45 46 2.664436 GGTAACCACAGCGCGTCAC 61.664 63.158 8.43 0.00 0.00 3.67
46 47 2.356553 GGTAACCACAGCGCGTCA 60.357 61.111 8.43 0.00 0.00 4.35
47 48 1.623973 GAAGGTAACCACAGCGCGTC 61.624 60.000 8.43 0.00 37.17 5.19
48 49 1.666872 GAAGGTAACCACAGCGCGT 60.667 57.895 8.43 0.00 37.17 6.01
50 51 1.226030 AACGAAGGTAACCACAGCGC 61.226 55.000 0.00 0.00 37.17 5.92
51 52 0.511221 CAACGAAGGTAACCACAGCG 59.489 55.000 0.00 0.00 37.17 5.18
52 53 0.872388 CCAACGAAGGTAACCACAGC 59.128 55.000 0.00 0.00 37.17 4.40
53 54 2.536761 TCCAACGAAGGTAACCACAG 57.463 50.000 0.00 0.00 37.17 3.66
54 55 2.435069 TCTTCCAACGAAGGTAACCACA 59.565 45.455 0.00 0.00 44.88 4.17
55 56 2.804527 GTCTTCCAACGAAGGTAACCAC 59.195 50.000 0.00 0.00 44.88 4.16
56 57 2.546373 CGTCTTCCAACGAAGGTAACCA 60.546 50.000 0.00 0.00 44.88 3.67
57 58 2.064014 CGTCTTCCAACGAAGGTAACC 58.936 52.381 0.00 0.00 44.88 2.85
59 60 1.787012 GCGTCTTCCAACGAAGGTAA 58.213 50.000 0.00 0.00 44.88 2.85
60 61 0.387622 CGCGTCTTCCAACGAAGGTA 60.388 55.000 0.00 0.00 44.88 3.08
61 62 1.663702 CGCGTCTTCCAACGAAGGT 60.664 57.895 0.00 0.00 44.88 3.50
62 63 2.380410 CCGCGTCTTCCAACGAAGG 61.380 63.158 4.92 0.00 44.88 3.46
63 64 3.011760 GCCGCGTCTTCCAACGAAG 62.012 63.158 4.92 0.00 45.37 3.79
65 66 4.287781 TGCCGCGTCTTCCAACGA 62.288 61.111 4.92 0.00 45.37 3.85
67 68 3.723348 GGTGCCGCGTCTTCCAAC 61.723 66.667 4.92 0.00 0.00 3.77
71 72 3.119096 GAAGGGTGCCGCGTCTTC 61.119 66.667 4.92 6.51 0.00 2.87
77 78 4.162690 ATCGAGGAAGGGTGCCGC 62.163 66.667 0.00 0.00 0.00 6.53
78 79 2.107141 GATCGAGGAAGGGTGCCG 59.893 66.667 0.00 0.00 0.00 5.69
79 80 1.443828 GAGATCGAGGAAGGGTGCC 59.556 63.158 0.00 0.00 0.00 5.01
82 83 1.455959 CGGGAGATCGAGGAAGGGT 60.456 63.158 0.00 0.00 0.00 4.34
83 84 2.203771 CCGGGAGATCGAGGAAGGG 61.204 68.421 0.00 0.00 0.00 3.95
84 85 2.862223 GCCGGGAGATCGAGGAAGG 61.862 68.421 2.18 0.00 0.00 3.46
85 86 2.731374 GCCGGGAGATCGAGGAAG 59.269 66.667 2.18 0.00 0.00 3.46
86 87 2.838225 GGCCGGGAGATCGAGGAA 60.838 66.667 2.18 0.00 0.00 3.36
87 88 3.452621 ATGGCCGGGAGATCGAGGA 62.453 63.158 2.18 0.00 0.00 3.71
88 89 2.919856 ATGGCCGGGAGATCGAGG 60.920 66.667 2.18 0.00 0.00 4.63
89 90 2.341543 CATGGCCGGGAGATCGAG 59.658 66.667 2.18 0.00 0.00 4.04
91 92 3.550431 ACCATGGCCGGGAGATCG 61.550 66.667 19.39 0.00 0.00 3.69
93 94 3.492353 CCACCATGGCCGGGAGAT 61.492 66.667 19.39 0.00 0.00 2.75
102 103 2.203252 CTGGATCCGCCACCATGG 60.203 66.667 11.19 11.19 43.33 3.66
103 104 1.524621 GTCTGGATCCGCCACCATG 60.525 63.158 7.39 0.00 43.33 3.66
107 108 2.512515 GCAGTCTGGATCCGCCAC 60.513 66.667 7.39 3.29 43.33 5.01
108 109 2.685017 AGCAGTCTGGATCCGCCA 60.685 61.111 7.39 0.00 46.96 5.69
110 111 2.894387 GCAGCAGTCTGGATCCGC 60.894 66.667 7.39 3.67 40.65 5.54
111 112 2.202987 GGCAGCAGTCTGGATCCG 60.203 66.667 7.39 2.06 40.65 4.18
112 113 2.202987 CGGCAGCAGTCTGGATCC 60.203 66.667 4.20 4.20 40.65 3.36
113 114 2.894387 GCGGCAGCAGTCTGGATC 60.894 66.667 3.18 0.00 44.35 3.36
114 115 4.827087 CGCGGCAGCAGTCTGGAT 62.827 66.667 10.08 0.00 45.49 3.41
124 125 2.811317 GAACAGACTCCGCGGCAG 60.811 66.667 23.51 20.72 0.00 4.85
125 126 4.373116 GGAACAGACTCCGCGGCA 62.373 66.667 23.51 8.85 0.00 5.69
127 128 4.452733 GGGGAACAGACTCCGCGG 62.453 72.222 22.12 22.12 38.51 6.46
132 133 0.606673 GCCTTGTGGGGAACAGACTC 60.607 60.000 0.00 0.00 40.74 3.36
133 134 1.456287 GCCTTGTGGGGAACAGACT 59.544 57.895 0.00 0.00 40.74 3.24
201 202 2.612115 ACCCAGAGGCCCTTGAGG 60.612 66.667 0.00 4.68 36.11 3.86
210 211 3.086600 GGAGAGCCCACCCAGAGG 61.087 72.222 0.00 0.00 40.04 3.69
235 236 1.741770 ATTCCACGCGAGTTCCTGC 60.742 57.895 15.93 0.00 46.40 4.85
237 238 0.034896 AACATTCCACGCGAGTTCCT 59.965 50.000 15.93 0.00 46.40 3.36
238 239 0.165944 CAACATTCCACGCGAGTTCC 59.834 55.000 15.93 0.00 46.40 3.62
240 241 1.852067 GCCAACATTCCACGCGAGTT 61.852 55.000 15.93 4.55 46.40 3.01
242 243 2.480555 GCCAACATTCCACGCGAG 59.519 61.111 15.93 4.16 0.00 5.03
243 244 3.418913 CGCCAACATTCCACGCGA 61.419 61.111 15.93 0.00 45.41 5.87
244 245 3.367051 CTCGCCAACATTCCACGCG 62.367 63.158 3.53 3.53 44.00 6.01
245 246 2.480555 CTCGCCAACATTCCACGC 59.519 61.111 0.00 0.00 0.00 5.34
247 248 1.503542 CAGCTCGCCAACATTCCAC 59.496 57.895 0.00 0.00 0.00 4.02
248 249 2.334946 GCAGCTCGCCAACATTCCA 61.335 57.895 0.00 0.00 32.94 3.53
249 250 2.334946 TGCAGCTCGCCAACATTCC 61.335 57.895 5.82 0.00 41.33 3.01
250 251 1.154150 GTGCAGCTCGCCAACATTC 60.154 57.895 5.82 0.00 41.33 2.67
251 252 2.629656 GGTGCAGCTCGCCAACATT 61.630 57.895 9.07 0.00 44.77 2.71
275 276 2.825836 CTGAACATCAGGCCGCCC 60.826 66.667 5.55 0.00 40.71 6.13
276 277 3.512516 GCTGAACATCAGGCCGCC 61.513 66.667 0.00 0.00 44.43 6.13
281 282 0.742281 CGTCCAGGCTGAACATCAGG 60.742 60.000 17.94 0.00 44.43 3.86
282 283 0.742281 CCGTCCAGGCTGAACATCAG 60.742 60.000 17.94 3.00 46.90 2.90
283 284 1.296392 CCGTCCAGGCTGAACATCA 59.704 57.895 17.94 0.00 0.00 3.07
284 285 1.450312 CCCGTCCAGGCTGAACATC 60.450 63.158 17.94 0.44 39.21 3.06
285 286 2.671070 CCCGTCCAGGCTGAACAT 59.329 61.111 17.94 0.00 39.21 2.71
299 300 2.087009 GTTCAAGACGACGAGCCCG 61.087 63.158 0.00 0.00 42.50 6.13
301 302 0.733223 GAGGTTCAAGACGACGAGCC 60.733 60.000 0.00 0.00 33.03 4.70
302 303 1.066114 CGAGGTTCAAGACGACGAGC 61.066 60.000 0.00 0.00 32.19 5.03
303 304 1.066114 GCGAGGTTCAAGACGACGAG 61.066 60.000 0.00 0.00 32.19 4.18
304 305 1.081641 GCGAGGTTCAAGACGACGA 60.082 57.895 0.00 0.00 32.19 4.20
305 306 2.087009 GGCGAGGTTCAAGACGACG 61.087 63.158 0.00 0.00 0.00 5.12
306 307 1.737008 GGGCGAGGTTCAAGACGAC 60.737 63.158 0.00 0.00 0.00 4.34
307 308 2.204461 TGGGCGAGGTTCAAGACGA 61.204 57.895 0.00 0.00 0.00 4.20
309 310 1.671379 GGTGGGCGAGGTTCAAGAC 60.671 63.158 0.00 0.00 0.00 3.01
310 311 1.841556 AGGTGGGCGAGGTTCAAGA 60.842 57.895 0.00 0.00 0.00 3.02
311 312 1.672356 CAGGTGGGCGAGGTTCAAG 60.672 63.158 0.00 0.00 0.00 3.02
312 313 2.429930 CAGGTGGGCGAGGTTCAA 59.570 61.111 0.00 0.00 0.00 2.69
333 334 4.736896 GACAGTCCCGGTCACCGC 62.737 72.222 12.05 0.00 46.86 5.68
335 336 1.885163 AATCGACAGTCCCGGTCACC 61.885 60.000 0.00 0.00 34.97 4.02
337 338 1.601419 GGAATCGACAGTCCCGGTCA 61.601 60.000 0.00 0.00 34.97 4.02
338 339 1.141234 GGAATCGACAGTCCCGGTC 59.859 63.158 0.00 0.00 0.00 4.79
339 340 2.707849 CGGAATCGACAGTCCCGGT 61.708 63.158 0.00 0.00 39.00 5.28
340 341 2.104331 CGGAATCGACAGTCCCGG 59.896 66.667 7.83 0.00 39.00 5.73
341 342 2.582498 GCGGAATCGACAGTCCCG 60.582 66.667 10.69 10.69 42.74 5.14
349 350 0.389391 GATTCAGGAGGCGGAATCGA 59.611 55.000 0.00 0.00 39.78 3.59
350 351 2.906047 GATTCAGGAGGCGGAATCG 58.094 57.895 0.00 0.00 39.78 3.34
351 352 1.224722 GCGATTCAGGAGGCGGAATC 61.225 60.000 11.56 11.56 43.68 2.52
352 353 1.227674 GCGATTCAGGAGGCGGAAT 60.228 57.895 0.00 0.00 36.49 3.01
353 354 2.186903 GCGATTCAGGAGGCGGAA 59.813 61.111 0.00 0.00 0.00 4.30
354 355 3.849951 GGCGATTCAGGAGGCGGA 61.850 66.667 0.00 0.00 0.00 5.54
355 356 4.918201 GGGCGATTCAGGAGGCGG 62.918 72.222 0.00 0.00 0.00 6.13
356 357 4.161295 TGGGCGATTCAGGAGGCG 62.161 66.667 0.00 0.00 0.00 5.52
358 359 0.471617 ATTCTGGGCGATTCAGGAGG 59.528 55.000 0.00 0.00 33.36 4.30
359 360 2.869636 GCTATTCTGGGCGATTCAGGAG 60.870 54.545 0.00 0.00 33.36 3.69
360 361 1.070758 GCTATTCTGGGCGATTCAGGA 59.929 52.381 0.00 0.00 33.36 3.86
362 363 2.141517 CTGCTATTCTGGGCGATTCAG 58.858 52.381 0.00 0.00 0.00 3.02
365 366 0.471617 AGCTGCTATTCTGGGCGATT 59.528 50.000 0.00 0.00 0.00 3.34
366 367 0.471617 AAGCTGCTATTCTGGGCGAT 59.528 50.000 0.90 0.00 0.00 4.58
367 368 0.462581 CAAGCTGCTATTCTGGGCGA 60.463 55.000 0.90 0.00 0.00 5.54
368 369 0.745845 ACAAGCTGCTATTCTGGGCG 60.746 55.000 0.90 0.00 0.00 6.13
369 370 2.332063 TACAAGCTGCTATTCTGGGC 57.668 50.000 0.90 0.00 0.00 5.36
370 371 3.817647 GGAATACAAGCTGCTATTCTGGG 59.182 47.826 18.17 1.46 32.21 4.45
371 372 4.274459 GTGGAATACAAGCTGCTATTCTGG 59.726 45.833 18.17 2.88 32.21 3.86
373 374 4.455606 GGTGGAATACAAGCTGCTATTCT 58.544 43.478 18.17 0.00 32.21 2.40
374 375 3.565902 GGGTGGAATACAAGCTGCTATTC 59.434 47.826 12.93 12.93 0.00 1.75
377 378 1.211949 GGGGTGGAATACAAGCTGCTA 59.788 52.381 0.90 0.00 0.00 3.49
380 381 1.376609 GCGGGGTGGAATACAAGCTG 61.377 60.000 0.00 0.00 0.00 4.24
382 383 2.119029 GGCGGGGTGGAATACAAGC 61.119 63.158 0.00 0.00 0.00 4.01
384 385 0.106918 GATGGCGGGGTGGAATACAA 60.107 55.000 0.00 0.00 0.00 2.41
385 386 1.529796 GATGGCGGGGTGGAATACA 59.470 57.895 0.00 0.00 0.00 2.29
387 388 2.035237 GACGATGGCGGGGTGGAATA 62.035 60.000 0.00 0.00 43.17 1.75
388 389 3.400599 GACGATGGCGGGGTGGAAT 62.401 63.158 0.00 0.00 43.17 3.01
389 390 4.090588 GACGATGGCGGGGTGGAA 62.091 66.667 0.00 0.00 43.17 3.53
406 407 2.892425 GAGCTCCATTCACCGGCG 60.892 66.667 0.00 0.00 0.00 6.46
407 408 2.892425 CGAGCTCCATTCACCGGC 60.892 66.667 8.47 0.00 0.00 6.13
408 409 1.079127 AACGAGCTCCATTCACCGG 60.079 57.895 8.47 0.00 0.00 5.28
409 410 1.084370 GGAACGAGCTCCATTCACCG 61.084 60.000 21.09 6.66 35.36 4.94
410 411 2.768834 GGAACGAGCTCCATTCACC 58.231 57.895 21.09 8.75 35.36 4.02
424 425 3.170585 CCTCGACGTTCGCGGAAC 61.171 66.667 6.13 8.79 46.83 3.62
425 426 3.599792 GACCTCGACGTTCGCGGAA 62.600 63.158 18.67 0.00 46.83 4.30
426 427 4.093952 GACCTCGACGTTCGCGGA 62.094 66.667 18.67 0.00 46.83 5.54
430 431 1.135774 TCATTCAGACCTCGACGTTCG 60.136 52.381 0.00 0.00 42.10 3.95
431 432 2.251893 GTCATTCAGACCTCGACGTTC 58.748 52.381 0.00 0.00 41.56 3.95
432 433 2.349297 GTCATTCAGACCTCGACGTT 57.651 50.000 0.00 0.00 41.56 3.99
441 442 2.408271 TGCATCCAGGTCATTCAGAC 57.592 50.000 0.00 0.00 46.83 3.51
442 443 2.484241 CGATGCATCCAGGTCATTCAGA 60.484 50.000 20.87 0.00 0.00 3.27
443 444 1.871676 CGATGCATCCAGGTCATTCAG 59.128 52.381 20.87 0.00 0.00 3.02
446 447 0.548031 ACCGATGCATCCAGGTCATT 59.452 50.000 20.87 0.00 29.76 2.57
447 448 2.224821 ACCGATGCATCCAGGTCAT 58.775 52.632 20.87 0.00 29.76 3.06
448 449 3.726004 ACCGATGCATCCAGGTCA 58.274 55.556 20.87 0.00 29.76 4.02
449 450 4.445699 GACCGATGCATCCAGGTC 57.554 61.111 27.52 27.52 45.07 3.85
450 451 2.501128 CGACCGATGCATCCAGGT 59.499 61.111 21.94 21.94 40.11 4.00
451 452 2.280389 CCGACCGATGCATCCAGG 60.280 66.667 20.87 18.47 0.00 4.45
452 453 2.280389 CCCGACCGATGCATCCAG 60.280 66.667 20.87 14.63 0.00 3.86
453 454 4.545706 GCCCGACCGATGCATCCA 62.546 66.667 20.87 0.00 0.00 3.41
455 456 4.545706 TGGCCCGACCGATGCATC 62.546 66.667 17.10 17.10 43.94 3.91
456 457 4.856801 GTGGCCCGACCGATGCAT 62.857 66.667 0.00 0.00 43.94 3.96
459 460 3.461773 AGAGTGGCCCGACCGATG 61.462 66.667 0.00 0.00 43.94 3.84
460 461 3.461773 CAGAGTGGCCCGACCGAT 61.462 66.667 0.00 0.00 43.94 4.18
461 462 4.671590 TCAGAGTGGCCCGACCGA 62.672 66.667 0.00 0.00 43.94 4.69
462 463 4.135153 CTCAGAGTGGCCCGACCG 62.135 72.222 0.00 0.00 43.94 4.79
463 464 4.459089 GCTCAGAGTGGCCCGACC 62.459 72.222 0.00 0.00 39.84 4.79
471 472 4.135153 CCCCGACCGCTCAGAGTG 62.135 72.222 3.74 3.74 0.00 3.51
472 473 3.881019 TTCCCCGACCGCTCAGAGT 62.881 63.158 0.00 0.00 0.00 3.24
473 474 3.068691 TTCCCCGACCGCTCAGAG 61.069 66.667 0.00 0.00 0.00 3.35
474 475 3.068691 CTTCCCCGACCGCTCAGA 61.069 66.667 0.00 0.00 0.00 3.27
475 476 4.821589 GCTTCCCCGACCGCTCAG 62.822 72.222 0.00 0.00 0.00 3.35
488 489 2.119029 GGTGGTAATGGGGCGCTTC 61.119 63.158 7.64 0.00 0.00 3.86
490 491 4.123545 GGGTGGTAATGGGGCGCT 62.124 66.667 7.64 0.00 0.00 5.92
493 494 4.434354 TGCGGGTGGTAATGGGGC 62.434 66.667 0.00 0.00 0.00 5.80
494 495 2.124320 CTGCGGGTGGTAATGGGG 60.124 66.667 0.00 0.00 0.00 4.96
496 497 1.447317 GATGCTGCGGGTGGTAATGG 61.447 60.000 0.00 0.00 0.00 3.16
497 498 0.464373 AGATGCTGCGGGTGGTAATG 60.464 55.000 0.00 0.00 0.00 1.90
498 499 0.179045 GAGATGCTGCGGGTGGTAAT 60.179 55.000 0.00 0.00 0.00 1.89
499 500 1.220749 GAGATGCTGCGGGTGGTAA 59.779 57.895 0.00 0.00 0.00 2.85
500 501 2.731571 GGAGATGCTGCGGGTGGTA 61.732 63.158 0.00 0.00 0.00 3.25
501 502 4.101448 GGAGATGCTGCGGGTGGT 62.101 66.667 0.00 0.00 0.00 4.16
526 527 3.302347 AACTCTGCCTCGCCGGAAG 62.302 63.158 5.05 0.33 40.22 3.46
527 528 3.311110 AACTCTGCCTCGCCGGAA 61.311 61.111 5.05 0.00 33.16 4.30
528 529 4.069232 CAACTCTGCCTCGCCGGA 62.069 66.667 5.05 0.00 33.16 5.14
529 530 3.376935 ATCAACTCTGCCTCGCCGG 62.377 63.158 0.00 0.00 0.00 6.13
530 531 1.880340 GATCAACTCTGCCTCGCCG 60.880 63.158 0.00 0.00 0.00 6.46
531 532 0.529555 GAGATCAACTCTGCCTCGCC 60.530 60.000 0.00 0.00 41.94 5.54
532 533 0.529555 GGAGATCAACTCTGCCTCGC 60.530 60.000 0.00 0.00 44.37 5.03
533 534 0.248825 CGGAGATCAACTCTGCCTCG 60.249 60.000 0.00 0.00 43.75 4.63
534 535 3.657956 CGGAGATCAACTCTGCCTC 57.342 57.895 0.00 0.00 43.75 4.70
539 540 0.975040 AGCTGCCGGAGATCAACTCT 60.975 55.000 5.05 0.00 44.37 3.24
540 541 0.809241 CAGCTGCCGGAGATCAACTC 60.809 60.000 5.05 0.00 44.24 3.01
541 542 1.220206 CAGCTGCCGGAGATCAACT 59.780 57.895 5.05 0.00 0.00 3.16
543 544 2.124983 GCAGCTGCCGGAGATCAA 60.125 61.111 28.76 0.00 34.31 2.57
545 546 2.280052 GAGCAGCTGCCGGAGATC 60.280 66.667 34.39 20.39 43.38 2.75
546 547 3.859414 GGAGCAGCTGCCGGAGAT 61.859 66.667 34.39 15.79 43.38 2.75
554 555 4.767255 GTCCCCGTGGAGCAGCTG 62.767 72.222 10.11 10.11 42.85 4.24
573 574 4.760047 CCTTGCACCTCCGGTCCG 62.760 72.222 3.60 3.60 31.02 4.79
574 575 4.410400 CCCTTGCACCTCCGGTCC 62.410 72.222 0.00 0.00 31.02 4.46
605 606 3.869272 GTTCGGCGGCTGCATCTG 61.869 66.667 21.31 5.89 45.35 2.90
634 635 4.736896 GACCGGACCGCAGACCAC 62.737 72.222 9.46 0.00 0.00 4.16
649 650 3.493303 GGGAGATGCCAGGGGGAC 61.493 72.222 0.00 0.00 38.95 4.46
650 651 4.843331 GGGGAGATGCCAGGGGGA 62.843 72.222 0.00 0.00 38.95 4.81
666 667 4.253257 GCGAGCGAGAGTACGGGG 62.253 72.222 0.00 0.00 33.93 5.73
667 668 4.592936 CGCGAGCGAGAGTACGGG 62.593 72.222 12.58 0.00 42.83 5.28
669 670 2.349869 GACGCGAGCGAGAGTACG 60.350 66.667 24.72 1.95 42.83 3.67
670 671 2.349869 CGACGCGAGCGAGAGTAC 60.350 66.667 24.72 6.91 42.83 2.73
671 672 4.219846 GCGACGCGAGCGAGAGTA 62.220 66.667 24.72 0.00 42.83 2.59
683 684 2.648102 CCTACTCGAAGCGCGACG 60.648 66.667 12.10 19.54 45.59 5.12
684 685 1.868251 CACCTACTCGAAGCGCGAC 60.868 63.158 12.10 0.04 45.59 5.19
686 687 2.337749 ATCCACCTACTCGAAGCGCG 62.338 60.000 0.00 0.00 42.69 6.86
687 688 0.666913 TATCCACCTACTCGAAGCGC 59.333 55.000 0.00 0.00 0.00 5.92
688 689 1.674441 TGTATCCACCTACTCGAAGCG 59.326 52.381 0.00 0.00 0.00 4.68
689 690 2.688958 ACTGTATCCACCTACTCGAAGC 59.311 50.000 0.00 0.00 0.00 3.86
690 691 3.066900 CCACTGTATCCACCTACTCGAAG 59.933 52.174 0.00 0.00 0.00 3.79
692 693 2.025605 ACCACTGTATCCACCTACTCGA 60.026 50.000 0.00 0.00 0.00 4.04
693 694 2.099263 CACCACTGTATCCACCTACTCG 59.901 54.545 0.00 0.00 0.00 4.18
694 695 2.431057 CCACCACTGTATCCACCTACTC 59.569 54.545 0.00 0.00 0.00 2.59
696 697 1.485066 CCCACCACTGTATCCACCTAC 59.515 57.143 0.00 0.00 0.00 3.18
697 698 1.624113 CCCCACCACTGTATCCACCTA 60.624 57.143 0.00 0.00 0.00 3.08
698 699 0.914417 CCCCACCACTGTATCCACCT 60.914 60.000 0.00 0.00 0.00 4.00
699 700 0.912487 TCCCCACCACTGTATCCACC 60.912 60.000 0.00 0.00 0.00 4.61
700 701 1.213296 ATCCCCACCACTGTATCCAC 58.787 55.000 0.00 0.00 0.00 4.02
702 703 1.133792 CCAATCCCCACCACTGTATCC 60.134 57.143 0.00 0.00 0.00 2.59
704 705 0.926293 CCCAATCCCCACCACTGTAT 59.074 55.000 0.00 0.00 0.00 2.29
705 706 0.476808 ACCCAATCCCCACCACTGTA 60.477 55.000 0.00 0.00 0.00 2.74
706 707 1.778383 ACCCAATCCCCACCACTGT 60.778 57.895 0.00 0.00 0.00 3.55
707 708 1.304381 CACCCAATCCCCACCACTG 60.304 63.158 0.00 0.00 0.00 3.66
708 709 2.547595 CCACCCAATCCCCACCACT 61.548 63.158 0.00 0.00 0.00 4.00
712 713 4.074408 CCCCCACCCAATCCCCAC 62.074 72.222 0.00 0.00 0.00 4.61
713 714 4.309689 TCCCCCACCCAATCCCCA 62.310 66.667 0.00 0.00 0.00 4.96
714 715 3.429580 CTCCCCCACCCAATCCCC 61.430 72.222 0.00 0.00 0.00 4.81
716 717 4.143301 GCCTCCCCCACCCAATCC 62.143 72.222 0.00 0.00 0.00 3.01
718 719 3.350163 CTGCCTCCCCCACCCAAT 61.350 66.667 0.00 0.00 0.00 3.16
729 730 3.462678 GACCCTCGTCCCTGCCTC 61.463 72.222 0.00 0.00 32.40 4.70
732 733 0.322546 AAATTGACCCTCGTCCCTGC 60.323 55.000 0.00 0.00 38.32 4.85
733 734 1.003118 TCAAATTGACCCTCGTCCCTG 59.997 52.381 0.00 0.00 38.32 4.45
735 736 1.450025 GTCAAATTGACCCTCGTCCC 58.550 55.000 14.78 0.00 41.37 4.46
744 745 0.721718 CCGAGCGAGGTCAAATTGAC 59.278 55.000 17.16 17.16 46.23 3.18
745 746 1.019278 GCCGAGCGAGGTCAAATTGA 61.019 55.000 0.00 0.00 0.00 2.57
746 747 1.298157 TGCCGAGCGAGGTCAAATTG 61.298 55.000 3.15 0.00 0.00 2.32
747 748 0.392998 ATGCCGAGCGAGGTCAAATT 60.393 50.000 3.15 0.00 0.00 1.82
749 750 0.248012 TAATGCCGAGCGAGGTCAAA 59.752 50.000 3.15 0.00 0.00 2.69
753 754 0.532862 CCATTAATGCCGAGCGAGGT 60.533 55.000 10.11 0.00 0.00 3.85
754 755 1.845809 GCCATTAATGCCGAGCGAGG 61.846 60.000 10.11 0.00 0.00 4.63
755 756 1.571460 GCCATTAATGCCGAGCGAG 59.429 57.895 10.11 0.00 0.00 5.03
756 757 2.243957 CGCCATTAATGCCGAGCGA 61.244 57.895 23.82 0.00 46.03 4.93
759 760 0.861837 GAGTCGCCATTAATGCCGAG 59.138 55.000 20.58 5.56 0.00 4.63
760 761 0.531974 GGAGTCGCCATTAATGCCGA 60.532 55.000 16.74 16.74 36.34 5.54
761 762 0.813610 TGGAGTCGCCATTAATGCCG 60.814 55.000 12.35 12.35 43.33 5.69
762 763 3.094386 TGGAGTCGCCATTAATGCC 57.906 52.632 10.11 5.37 43.33 4.40
779 780 2.512056 TCCCCACCTACCACCATTAATG 59.488 50.000 8.58 8.58 0.00 1.90
780 781 2.866515 TCCCCACCTACCACCATTAAT 58.133 47.619 0.00 0.00 0.00 1.40
781 782 2.362797 TCCCCACCTACCACCATTAA 57.637 50.000 0.00 0.00 0.00 1.40
783 784 1.569072 GATTCCCCACCTACCACCATT 59.431 52.381 0.00 0.00 0.00 3.16
784 785 1.222567 GATTCCCCACCTACCACCAT 58.777 55.000 0.00 0.00 0.00 3.55
786 787 1.920532 GGATTCCCCACCTACCACC 59.079 63.158 0.00 0.00 34.14 4.61
787 788 1.525442 CGGATTCCCCACCTACCAC 59.475 63.158 0.00 0.00 34.14 4.16
788 789 2.372074 GCGGATTCCCCACCTACCA 61.372 63.158 0.00 0.00 34.14 3.25
789 790 2.509422 GCGGATTCCCCACCTACC 59.491 66.667 0.00 0.00 34.14 3.18
790 791 2.509422 GGCGGATTCCCCACCTAC 59.491 66.667 0.00 0.00 34.14 3.18
796 797 4.547367 CGACTGGGCGGATTCCCC 62.547 72.222 0.00 0.00 45.97 4.81
829 830 1.227089 CTCTTCTGATGTCGGGCGG 60.227 63.158 0.00 0.00 0.00 6.13
830 831 0.248825 CTCTCTTCTGATGTCGGGCG 60.249 60.000 0.00 0.00 0.00 6.13
831 832 0.820871 ACTCTCTTCTGATGTCGGGC 59.179 55.000 0.00 0.00 0.00 6.13
832 833 1.407258 GGACTCTCTTCTGATGTCGGG 59.593 57.143 0.00 0.00 31.19 5.14
833 834 1.407258 GGGACTCTCTTCTGATGTCGG 59.593 57.143 0.00 0.00 31.19 4.79
834 835 2.095461 TGGGACTCTCTTCTGATGTCG 58.905 52.381 0.00 0.00 31.19 4.35
835 836 4.543590 TTTGGGACTCTCTTCTGATGTC 57.456 45.455 0.00 0.00 0.00 3.06
836 837 4.982241 TTTTGGGACTCTCTTCTGATGT 57.018 40.909 0.00 0.00 0.00 3.06
837 838 5.064452 CGATTTTTGGGACTCTCTTCTGATG 59.936 44.000 0.00 0.00 0.00 3.07
838 839 5.181748 CGATTTTTGGGACTCTCTTCTGAT 58.818 41.667 0.00 0.00 0.00 2.90
839 840 4.040461 ACGATTTTTGGGACTCTCTTCTGA 59.960 41.667 0.00 0.00 0.00 3.27
840 841 4.319177 ACGATTTTTGGGACTCTCTTCTG 58.681 43.478 0.00 0.00 0.00 3.02
841 842 4.625607 ACGATTTTTGGGACTCTCTTCT 57.374 40.909 0.00 0.00 0.00 2.85
842 843 4.630505 GGTACGATTTTTGGGACTCTCTTC 59.369 45.833 0.00 0.00 0.00 2.87
843 844 4.286291 AGGTACGATTTTTGGGACTCTCTT 59.714 41.667 0.00 0.00 0.00 2.85
844 845 3.838903 AGGTACGATTTTTGGGACTCTCT 59.161 43.478 0.00 0.00 0.00 3.10
845 846 3.933332 CAGGTACGATTTTTGGGACTCTC 59.067 47.826 0.00 0.00 0.00 3.20
848 849 2.640826 TCCAGGTACGATTTTTGGGACT 59.359 45.455 0.00 0.00 0.00 3.85
849 850 3.062122 TCCAGGTACGATTTTTGGGAC 57.938 47.619 0.00 0.00 0.00 4.46
850 851 5.640158 ATATCCAGGTACGATTTTTGGGA 57.360 39.130 0.00 0.00 0.00 4.37
851 852 5.240844 GGAATATCCAGGTACGATTTTTGGG 59.759 44.000 0.00 0.00 36.28 4.12
853 854 5.526111 ACGGAATATCCAGGTACGATTTTTG 59.474 40.000 0.00 0.00 35.91 2.44
855 856 5.286267 ACGGAATATCCAGGTACGATTTT 57.714 39.130 0.00 0.00 35.91 1.82
856 857 4.950205 ACGGAATATCCAGGTACGATTT 57.050 40.909 0.00 0.00 35.91 2.17
857 858 4.950205 AACGGAATATCCAGGTACGATT 57.050 40.909 0.00 0.00 35.91 3.34
858 859 4.082354 GCTAACGGAATATCCAGGTACGAT 60.082 45.833 0.00 0.00 35.91 3.73
860 861 3.255149 AGCTAACGGAATATCCAGGTACG 59.745 47.826 0.00 0.00 35.91 3.67
861 862 4.038883 ACAGCTAACGGAATATCCAGGTAC 59.961 45.833 0.00 0.00 35.91 3.34
862 863 4.038763 CACAGCTAACGGAATATCCAGGTA 59.961 45.833 0.00 0.00 35.91 3.08
863 864 3.039011 ACAGCTAACGGAATATCCAGGT 58.961 45.455 0.00 0.00 35.91 4.00
864 865 3.181465 ACACAGCTAACGGAATATCCAGG 60.181 47.826 0.00 0.00 35.91 4.45
865 866 4.051922 GACACAGCTAACGGAATATCCAG 58.948 47.826 0.00 0.00 35.91 3.86
866 867 3.181469 GGACACAGCTAACGGAATATCCA 60.181 47.826 0.00 0.00 35.91 3.41
867 868 3.391049 GGACACAGCTAACGGAATATCC 58.609 50.000 0.00 0.00 0.00 2.59
868 869 3.050619 CGGACACAGCTAACGGAATATC 58.949 50.000 0.00 0.00 0.00 1.63
869 870 2.429610 ACGGACACAGCTAACGGAATAT 59.570 45.455 0.00 0.00 0.00 1.28
870 871 1.820519 ACGGACACAGCTAACGGAATA 59.179 47.619 0.00 0.00 0.00 1.75
871 872 0.606604 ACGGACACAGCTAACGGAAT 59.393 50.000 0.00 0.00 0.00 3.01
872 873 0.319211 CACGGACACAGCTAACGGAA 60.319 55.000 0.00 0.00 0.00 4.30
873 874 1.287815 CACGGACACAGCTAACGGA 59.712 57.895 0.00 0.00 0.00 4.69
874 875 1.006571 ACACGGACACAGCTAACGG 60.007 57.895 0.00 0.00 0.00 4.44
875 876 1.334992 CGACACGGACACAGCTAACG 61.335 60.000 0.00 0.00 0.00 3.18
906 907 7.931948 AGTACTCGGCATAAGCATAATTAAACT 59.068 33.333 0.00 0.00 44.61 2.66
925 926 5.786401 AAACCTACACGTACTAGTACTCG 57.214 43.478 26.36 19.78 34.04 4.18
949 950 7.578310 TTATAGGCTCACGTGTAGTAAGAAT 57.422 36.000 16.51 3.46 0.00 2.40
950 951 7.395190 TTTATAGGCTCACGTGTAGTAAGAA 57.605 36.000 16.51 0.99 0.00 2.52
951 952 7.337689 TCTTTTATAGGCTCACGTGTAGTAAGA 59.662 37.037 16.51 9.09 0.00 2.10
952 953 7.478322 TCTTTTATAGGCTCACGTGTAGTAAG 58.522 38.462 16.51 6.12 0.00 2.34
954 955 7.519488 CGATCTTTTATAGGCTCACGTGTAGTA 60.519 40.741 16.51 3.94 0.00 1.82
955 956 5.909621 TCTTTTATAGGCTCACGTGTAGT 57.090 39.130 16.51 1.64 0.00 2.73
956 957 5.625721 CGATCTTTTATAGGCTCACGTGTAG 59.374 44.000 16.51 12.50 0.00 2.74
957 958 5.066893 ACGATCTTTTATAGGCTCACGTGTA 59.933 40.000 16.51 0.13 0.00 2.90
966 992 6.228258 TCCATGGTTACGATCTTTTATAGGC 58.772 40.000 12.58 0.00 0.00 3.93
967 993 8.148351 TCTTCCATGGTTACGATCTTTTATAGG 58.852 37.037 12.58 0.00 0.00 2.57
973 999 5.066505 GCAATCTTCCATGGTTACGATCTTT 59.933 40.000 12.58 0.00 0.00 2.52
979 1005 4.188462 TGTAGCAATCTTCCATGGTTACG 58.812 43.478 12.58 0.00 0.00 3.18
983 1009 4.202441 GTGATGTAGCAATCTTCCATGGT 58.798 43.478 12.58 0.00 0.00 3.55
984 1010 3.567164 GGTGATGTAGCAATCTTCCATGG 59.433 47.826 4.97 4.97 0.00 3.66
985 1011 4.458397 AGGTGATGTAGCAATCTTCCATG 58.542 43.478 0.00 0.00 0.00 3.66
987 1013 3.430790 CGAGGTGATGTAGCAATCTTCCA 60.431 47.826 0.00 0.00 0.00 3.53
988 1014 3.126831 CGAGGTGATGTAGCAATCTTCC 58.873 50.000 0.00 0.00 0.00 3.46
989 1015 3.799420 GTCGAGGTGATGTAGCAATCTTC 59.201 47.826 0.00 0.00 0.00 2.87
991 1017 2.101582 GGTCGAGGTGATGTAGCAATCT 59.898 50.000 0.00 0.00 0.00 2.40
994 1020 0.535335 GGGTCGAGGTGATGTAGCAA 59.465 55.000 0.00 0.00 0.00 3.91
995 1021 1.663379 CGGGTCGAGGTGATGTAGCA 61.663 60.000 0.00 0.00 0.00 3.49
996 1022 1.065928 CGGGTCGAGGTGATGTAGC 59.934 63.158 0.00 0.00 0.00 3.58
997 1023 1.332997 GTACGGGTCGAGGTGATGTAG 59.667 57.143 0.00 0.00 0.00 2.74
1004 1071 1.101331 GATCAAGTACGGGTCGAGGT 58.899 55.000 0.00 0.00 0.00 3.85
1005 1072 0.029035 CGATCAAGTACGGGTCGAGG 59.971 60.000 15.38 0.00 34.46 4.63
1133 1212 1.453015 ACACGGCACCAAAGCTGAA 60.453 52.632 1.26 0.00 43.63 3.02
1226 1305 2.279252 ATCCATGTACGCGCCGTC 60.279 61.111 5.73 0.00 41.54 4.79
1227 1306 2.279252 GATCCATGTACGCGCCGT 60.279 61.111 5.73 5.91 44.35 5.68
1283 1362 0.378257 GCACATGCACGGTATCCTTG 59.622 55.000 0.00 0.00 41.59 3.61
1288 1367 1.748879 GGTGGCACATGCACGGTAT 60.749 57.895 20.82 0.00 44.52 2.73
1368 1447 4.222847 CCGGCGTAGAAGGGGAGC 62.223 72.222 6.01 0.00 0.00 4.70
1565 1647 1.112315 ACCGTTTCATTGCTTGGCCA 61.112 50.000 0.00 0.00 0.00 5.36
1629 1714 2.042842 TCCCAATCATGGTGTTGATGGT 59.957 45.455 0.00 0.00 46.01 3.55
1630 1715 2.737544 TCCCAATCATGGTGTTGATGG 58.262 47.619 0.00 0.00 46.01 3.51
1649 1734 4.162040 AGGTGAAGTCCCAATCATCATC 57.838 45.455 0.00 0.00 0.00 2.92
1668 1753 1.068741 GGAAGGCTATGTCCGTGTAGG 59.931 57.143 0.00 0.00 42.97 3.18
1937 2341 2.664851 CGCCTCGAACACCTGCAA 60.665 61.111 0.00 0.00 0.00 4.08
2051 2455 4.190001 CCTTGGAACATCTGATCTGACAG 58.810 47.826 4.21 0.00 39.30 3.51
2079 2483 0.537188 ATCGCCGAGAAGGAACACAT 59.463 50.000 0.00 0.00 45.00 3.21
2190 2603 6.996180 AACTAGCTACCCTGCTCATTATAA 57.004 37.500 0.00 0.00 42.97 0.98
2191 2604 6.996180 AAACTAGCTACCCTGCTCATTATA 57.004 37.500 0.00 0.00 42.97 0.98
2194 2607 4.717280 ACTAAACTAGCTACCCTGCTCATT 59.283 41.667 0.00 0.00 42.97 2.57
2205 2618 8.426569 TCCACCTAAAGAAACTAAACTAGCTA 57.573 34.615 0.00 0.00 0.00 3.32
2448 2864 1.560923 AACGTCGCACATGAGCTATC 58.439 50.000 13.36 2.88 0.00 2.08
2514 2930 0.992072 CGTTGAAGACGTCGCATCAT 59.008 50.000 18.09 0.00 46.49 2.45
2535 2951 3.867857 TGTCGCATTGGAGCTATTGTTA 58.132 40.909 0.00 0.00 0.00 2.41
2562 2978 7.010552 CGTGTTTTTCATTCCATGGTTAAACAA 59.989 33.333 12.58 0.00 37.17 2.83
2575 2991 3.552068 CCAACCCCTCGTGTTTTTCATTC 60.552 47.826 0.00 0.00 0.00 2.67
2596 3012 2.536928 GCGTGTCATAACTCAAATCGCC 60.537 50.000 0.00 0.00 36.10 5.54
2733 3198 1.381191 GGTGGGGCAAGTAATGGGG 60.381 63.158 0.00 0.00 0.00 4.96
2734 3199 1.381191 GGGTGGGGCAAGTAATGGG 60.381 63.158 0.00 0.00 0.00 4.00
2740 3205 2.526110 GAAAGGGGTGGGGCAAGT 59.474 61.111 0.00 0.00 0.00 3.16
2748 3213 0.541998 GGTGGGAAAGGAAAGGGGTG 60.542 60.000 0.00 0.00 0.00 4.61
2895 3360 1.220206 CGCTTCAGAGGCTCCATGT 59.780 57.895 11.71 0.00 0.00 3.21
2985 3450 0.911769 CACAGATCTAACCTGCCCCA 59.088 55.000 0.00 0.00 35.14 4.96
3368 3891 5.499139 AATAAACCCATAGCAATGACACG 57.501 39.130 0.00 0.00 34.84 4.49
3406 3929 8.656849 TGAAACTCTAACAAATTCTAGCGATTC 58.343 33.333 0.00 0.00 0.00 2.52
3437 3960 2.613977 CCCCTGAAACTAGCTGACACAG 60.614 54.545 0.00 0.00 34.12 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.