Multiple sequence alignment - TraesCS7D01G539500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G539500 chr7D 100.000 5064 0 0 1 5064 629822640 629827703 0.000000e+00 9352
1 TraesCS7D01G539500 chr7D 83.333 432 65 6 1654 2083 178010048 178009622 4.750000e-105 392
2 TraesCS7D01G539500 chr7B 91.709 2569 117 48 1528 4046 732644696 732647218 0.000000e+00 3476
3 TraesCS7D01G539500 chr7B 89.458 664 50 13 335 983 732643484 732644142 0.000000e+00 821
4 TraesCS7D01G539500 chr7B 82.765 557 50 20 976 1519 732644071 732644594 5.980000e-124 455
5 TraesCS7D01G539500 chr7B 83.871 434 63 6 1654 2085 144077992 144077564 1.700000e-109 407
6 TraesCS7D01G539500 chr7B 92.899 169 9 2 30 198 732638112 732638277 5.070000e-60 243
7 TraesCS7D01G539500 chr7B 96.386 83 2 1 216 298 732643402 732643483 8.840000e-28 135
8 TraesCS7D01G539500 chr7A 94.682 1448 42 9 1034 2459 725912057 725913491 0.000000e+00 2215
9 TraesCS7D01G539500 chr7A 84.085 754 69 22 195 924 725911315 725912041 0.000000e+00 680
10 TraesCS7D01G539500 chr7A 84.370 595 50 27 3186 3747 725915121 725915705 1.240000e-150 544
11 TraesCS7D01G539500 chr7A 83.603 433 64 6 1653 2083 182019648 182019221 2.840000e-107 399
12 TraesCS7D01G539500 chr7A 94.839 155 6 2 45 198 725911114 725911267 1.820000e-59 241
13 TraesCS7D01G539500 chr7A 85.446 213 24 6 2623 2834 725913670 725913876 1.100000e-51 215
14 TraesCS7D01G539500 chr3D 91.351 740 37 11 954 1684 98970409 98971130 0.000000e+00 987
15 TraesCS7D01G539500 chr3D 87.831 378 35 8 627 999 98970131 98970502 2.800000e-117 433
16 TraesCS7D01G539500 chr5A 90.559 519 41 4 1568 2086 547719901 547720411 0.000000e+00 680
17 TraesCS7D01G539500 chr5A 80.350 799 103 31 3110 3865 547722471 547723258 1.590000e-154 556
18 TraesCS7D01G539500 chr5A 89.873 158 6 2 2175 2323 547721224 547721380 1.440000e-45 195
19 TraesCS7D01G539500 chr5A 87.500 96 9 2 2529 2623 547721810 547721903 1.930000e-19 108
20 TraesCS7D01G539500 chr5D 90.366 519 38 6 1568 2086 433061623 433062129 0.000000e+00 671
21 TraesCS7D01G539500 chr5D 78.239 795 103 33 3110 3865 433063799 433064562 3.600000e-121 446
22 TraesCS7D01G539500 chr5D 89.873 158 6 2 2175 2323 433062743 433062899 1.440000e-45 195
23 TraesCS7D01G539500 chr5B 93.013 458 28 3 1630 2087 526643226 526643679 0.000000e+00 665
24 TraesCS7D01G539500 chr5B 81.231 650 76 26 3177 3787 526645474 526646116 2.740000e-132 483
25 TraesCS7D01G539500 chr5B 89.241 158 5 6 2175 2323 526643926 526644080 2.410000e-43 187
26 TraesCS7D01G539500 chr5B 75.172 290 52 12 2338 2623 526644065 526644338 8.910000e-23 119
27 TraesCS7D01G539500 chr3B 85.408 233 30 4 1652 1882 149463267 149463497 6.550000e-59 239


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G539500 chr7D 629822640 629827703 5063 False 9352.000000 9352 100.000000 1 5064 1 chr7D.!!$F1 5063
1 TraesCS7D01G539500 chr7B 732643402 732647218 3816 False 1221.750000 3476 90.079500 216 4046 4 chr7B.!!$F2 3830
2 TraesCS7D01G539500 chr7A 725911114 725915705 4591 False 779.000000 2215 88.684400 45 3747 5 chr7A.!!$F1 3702
3 TraesCS7D01G539500 chr3D 98970131 98971130 999 False 710.000000 987 89.591000 627 1684 2 chr3D.!!$F1 1057
4 TraesCS7D01G539500 chr5A 547719901 547723258 3357 False 384.750000 680 87.070500 1568 3865 4 chr5A.!!$F1 2297
5 TraesCS7D01G539500 chr5D 433061623 433064562 2939 False 437.333333 671 86.159333 1568 3865 3 chr5D.!!$F1 2297
6 TraesCS7D01G539500 chr5B 526643226 526646116 2890 False 363.500000 665 84.664250 1630 3787 4 chr5B.!!$F1 2157

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
404 468 0.034574 TGAACACTGCGCCCCATAAT 60.035 50.0 4.18 0.0 0.0 1.28 F
517 590 0.589223 TGATTTCGTTTCGGTGCCAC 59.411 50.0 0.00 0.0 0.0 5.01 F
2513 3910 0.612229 ACACTCCAGAGACCAGCATG 59.388 55.0 0.70 0.0 0.0 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1900 2137 2.360852 GTCGACCCGAGGACCTGA 60.361 66.667 3.51 0.0 36.23 3.86 R
2515 3912 0.100682 CATCTGGTGGGAGTACGACG 59.899 60.000 0.00 0.0 0.00 5.12 R
4303 7316 0.036671 GACCTTGGGAGTGGTTACGG 60.037 60.000 0.00 0.0 36.59 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 8.387053 GCAGTGAGCAAATAATAAAAGAGAAC 57.613 34.615 0.00 0.00 44.79 3.01
81 82 2.758423 TGAAGCAGGCTAATACGAGTGA 59.242 45.455 0.00 0.00 0.00 3.41
105 106 3.966665 TGAAATTGGTTTTGGCTCCTTCT 59.033 39.130 0.00 0.00 0.00 2.85
152 153 4.097892 ACTTTGTGTTCCCACTTTGTGATC 59.902 41.667 0.00 0.00 42.34 2.92
153 154 2.582052 TGTGTTCCCACTTTGTGATCC 58.418 47.619 0.00 0.00 42.34 3.36
154 155 2.174639 TGTGTTCCCACTTTGTGATCCT 59.825 45.455 0.00 0.00 42.34 3.24
155 156 3.392947 TGTGTTCCCACTTTGTGATCCTA 59.607 43.478 0.00 0.00 42.34 2.94
156 157 3.751698 GTGTTCCCACTTTGTGATCCTAC 59.248 47.826 0.00 0.00 38.61 3.18
157 158 3.392947 TGTTCCCACTTTGTGATCCTACA 59.607 43.478 0.00 0.00 35.23 2.74
158 159 4.042809 TGTTCCCACTTTGTGATCCTACAT 59.957 41.667 0.00 0.00 35.23 2.29
159 160 4.487714 TCCCACTTTGTGATCCTACATC 57.512 45.455 0.00 0.00 35.23 3.06
160 161 3.843619 TCCCACTTTGTGATCCTACATCA 59.156 43.478 0.00 0.00 35.23 3.07
161 162 3.941483 CCCACTTTGTGATCCTACATCAC 59.059 47.826 7.64 7.64 46.28 3.06
168 169 3.779738 TGTGATCCTACATCACCCATTCA 59.220 43.478 11.31 0.00 45.70 2.57
193 194 6.016777 ACCAAACTGCTTGAGAGAATACAAAG 60.017 38.462 0.00 0.00 37.17 2.77
337 396 5.308759 TGCATCCAGGATCTGATTGATTCTA 59.691 40.000 0.00 0.00 38.94 2.10
404 468 0.034574 TGAACACTGCGCCCCATAAT 60.035 50.000 4.18 0.00 0.00 1.28
479 547 4.946784 AAGCATCAACGTTACAATCCTC 57.053 40.909 0.00 0.00 0.00 3.71
483 556 4.033358 GCATCAACGTTACAATCCTCTCTG 59.967 45.833 0.00 0.00 0.00 3.35
517 590 0.589223 TGATTTCGTTTCGGTGCCAC 59.411 50.000 0.00 0.00 0.00 5.01
534 607 2.032550 GCCACATCGAAATGGACAGATG 59.967 50.000 19.68 3.12 44.22 2.90
556 629 3.554960 GGAAGGGCACAAATCAAAAGACC 60.555 47.826 0.00 0.00 0.00 3.85
557 630 1.970640 AGGGCACAAATCAAAAGACCC 59.029 47.619 0.00 0.00 36.29 4.46
691 772 2.198336 TCCTCCTATTTGGCCCGTTTA 58.802 47.619 0.00 0.00 35.26 2.01
738 819 4.274214 ACACGGACATCATATGCATTCTTG 59.726 41.667 3.54 0.73 0.00 3.02
787 868 3.070018 GGCATTAGGAGGATTCGTGATG 58.930 50.000 0.00 0.00 37.90 3.07
822 907 8.039603 ACGCAAGAAATCACAAGATAACATTA 57.960 30.769 0.00 0.00 43.62 1.90
823 908 8.511321 ACGCAAGAAATCACAAGATAACATTAA 58.489 29.630 0.00 0.00 43.62 1.40
824 909 9.507280 CGCAAGAAATCACAAGATAACATTAAT 57.493 29.630 0.00 0.00 43.02 1.40
843 928 2.535012 TTTGCTACGACACATGGACA 57.465 45.000 0.00 0.00 0.00 4.02
875 960 2.146061 GGAGGATGGGAGCCTGGAG 61.146 68.421 0.00 0.00 35.44 3.86
924 1023 9.120538 GTACTGAAACAAGAGAGAGATAGAGAT 57.879 37.037 0.00 0.00 0.00 2.75
926 1025 9.120538 ACTGAAACAAGAGAGAGATAGAGATAC 57.879 37.037 0.00 0.00 0.00 2.24
928 1027 8.898761 TGAAACAAGAGAGAGATAGAGATACAC 58.101 37.037 0.00 0.00 0.00 2.90
929 1028 8.815565 AAACAAGAGAGAGATAGAGATACACA 57.184 34.615 0.00 0.00 0.00 3.72
930 1029 7.801716 ACAAGAGAGAGATAGAGATACACAC 57.198 40.000 0.00 0.00 0.00 3.82
936 1035 6.765989 AGAGAGATAGAGATACACACACAGAC 59.234 42.308 0.00 0.00 0.00 3.51
937 1036 6.418946 AGAGATAGAGATACACACACAGACA 58.581 40.000 0.00 0.00 0.00 3.41
939 1038 6.418946 AGATAGAGATACACACACAGACAGA 58.581 40.000 0.00 0.00 0.00 3.41
940 1039 4.775058 AGAGATACACACACAGACAGAC 57.225 45.455 0.00 0.00 0.00 3.51
941 1040 4.145052 AGAGATACACACACAGACAGACA 58.855 43.478 0.00 0.00 0.00 3.41
942 1041 4.217334 AGAGATACACACACAGACAGACAG 59.783 45.833 0.00 0.00 0.00 3.51
943 1042 4.145052 AGATACACACACAGACAGACAGA 58.855 43.478 0.00 0.00 0.00 3.41
944 1043 2.586258 ACACACACAGACAGACAGAC 57.414 50.000 0.00 0.00 0.00 3.51
945 1044 1.824852 ACACACACAGACAGACAGACA 59.175 47.619 0.00 0.00 0.00 3.41
946 1045 2.159184 ACACACACAGACAGACAGACAG 60.159 50.000 0.00 0.00 0.00 3.51
947 1046 2.099756 CACACACAGACAGACAGACAGA 59.900 50.000 0.00 0.00 0.00 3.41
948 1047 2.360483 ACACACAGACAGACAGACAGAG 59.640 50.000 0.00 0.00 0.00 3.35
949 1048 2.620585 CACACAGACAGACAGACAGAGA 59.379 50.000 0.00 0.00 0.00 3.10
950 1049 2.884012 ACACAGACAGACAGACAGAGAG 59.116 50.000 0.00 0.00 0.00 3.20
951 1050 3.145286 CACAGACAGACAGACAGAGAGA 58.855 50.000 0.00 0.00 0.00 3.10
952 1051 3.189080 CACAGACAGACAGACAGAGAGAG 59.811 52.174 0.00 0.00 0.00 3.20
953 1052 3.072330 ACAGACAGACAGACAGAGAGAGA 59.928 47.826 0.00 0.00 0.00 3.10
954 1053 3.686241 CAGACAGACAGACAGAGAGAGAG 59.314 52.174 0.00 0.00 0.00 3.20
955 1054 3.582647 AGACAGACAGACAGAGAGAGAGA 59.417 47.826 0.00 0.00 0.00 3.10
956 1055 3.935203 GACAGACAGACAGAGAGAGAGAG 59.065 52.174 0.00 0.00 0.00 3.20
957 1056 3.582647 ACAGACAGACAGAGAGAGAGAGA 59.417 47.826 0.00 0.00 0.00 3.10
958 1057 4.186926 CAGACAGACAGAGAGAGAGAGAG 58.813 52.174 0.00 0.00 0.00 3.20
959 1058 4.081476 CAGACAGACAGAGAGAGAGAGAGA 60.081 50.000 0.00 0.00 0.00 3.10
960 1059 4.161189 AGACAGACAGAGAGAGAGAGAGAG 59.839 50.000 0.00 0.00 0.00 3.20
961 1060 4.096681 ACAGACAGAGAGAGAGAGAGAGA 58.903 47.826 0.00 0.00 0.00 3.10
962 1061 4.161189 ACAGACAGAGAGAGAGAGAGAGAG 59.839 50.000 0.00 0.00 0.00 3.20
963 1062 4.403752 CAGACAGAGAGAGAGAGAGAGAGA 59.596 50.000 0.00 0.00 0.00 3.10
964 1063 4.648762 AGACAGAGAGAGAGAGAGAGAGAG 59.351 50.000 0.00 0.00 0.00 3.20
965 1064 4.614475 ACAGAGAGAGAGAGAGAGAGAGA 58.386 47.826 0.00 0.00 0.00 3.10
966 1065 4.648762 ACAGAGAGAGAGAGAGAGAGAGAG 59.351 50.000 0.00 0.00 0.00 3.20
967 1066 4.892345 CAGAGAGAGAGAGAGAGAGAGAGA 59.108 50.000 0.00 0.00 0.00 3.10
968 1067 5.009911 CAGAGAGAGAGAGAGAGAGAGAGAG 59.990 52.000 0.00 0.00 0.00 3.20
969 1068 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
970 1069 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
971 1070 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
972 1071 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
973 1072 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
974 1073 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
975 1074 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
976 1075 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
977 1076 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
978 1077 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
979 1078 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
980 1079 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
981 1080 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
982 1081 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
983 1082 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
984 1083 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
985 1084 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
986 1085 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
987 1086 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
988 1087 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
989 1088 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
990 1089 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
991 1090 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
992 1091 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
993 1092 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
994 1093 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
995 1094 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
996 1095 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
997 1096 4.222336 AGAGAGAGAGAGAGAGAGAGAGG 58.778 52.174 0.00 0.00 0.00 3.69
1038 1137 2.485795 CCGGCCGAAGAGAGAGAGG 61.486 68.421 30.73 0.00 0.00 3.69
1209 1317 2.346365 CTCTGAGCAGCACCAGCA 59.654 61.111 9.32 0.52 45.49 4.41
1210 1318 1.302271 CTCTGAGCAGCACCAGCAA 60.302 57.895 9.32 0.00 45.49 3.91
1211 1319 0.677098 CTCTGAGCAGCACCAGCAAT 60.677 55.000 9.32 0.00 45.49 3.56
1251 1362 1.000506 TCCAGTTCGTGCAGAAGGTAC 59.999 52.381 0.00 0.00 39.95 3.34
1298 1409 7.488322 TGGATTATTTTTCATCCACGGATTTC 58.512 34.615 0.00 0.00 43.44 2.17
1507 1641 4.514506 CAATATTGTAACGTTGCGGCTAG 58.485 43.478 11.99 0.00 0.00 3.42
1608 1845 5.698545 GGACAAGCGAGCAAATAATCTATCT 59.301 40.000 0.00 0.00 0.00 1.98
1650 1887 1.031571 TTCTTGGATCATGGGCGCAC 61.032 55.000 10.83 6.04 0.00 5.34
1840 2077 4.629523 TTCAACCCCGCCGTCACC 62.630 66.667 0.00 0.00 0.00 4.02
2407 3437 5.915744 AGCCTCTAGTTATCTCCTAGTGA 57.084 43.478 0.00 0.00 34.72 3.41
2513 3910 0.612229 ACACTCCAGAGACCAGCATG 59.388 55.000 0.70 0.00 0.00 4.06
2524 3921 3.693245 CAGCATGGCGTCGTACTC 58.307 61.111 0.00 0.00 0.00 2.59
2525 3922 1.878522 CAGCATGGCGTCGTACTCC 60.879 63.158 0.00 0.00 0.00 3.85
2526 3923 2.585247 GCATGGCGTCGTACTCCC 60.585 66.667 0.00 0.00 0.00 4.30
2527 3924 2.889617 CATGGCGTCGTACTCCCA 59.110 61.111 0.00 0.00 0.00 4.37
2528 3925 1.518572 CATGGCGTCGTACTCCCAC 60.519 63.158 0.00 0.00 0.00 4.61
2529 3926 2.718073 ATGGCGTCGTACTCCCACC 61.718 63.158 0.00 0.00 0.00 4.61
2530 3927 3.376078 GGCGTCGTACTCCCACCA 61.376 66.667 0.00 0.00 0.00 4.17
2531 3928 2.181021 GCGTCGTACTCCCACCAG 59.819 66.667 0.00 0.00 0.00 4.00
2532 3929 2.338015 GCGTCGTACTCCCACCAGA 61.338 63.158 0.00 0.00 0.00 3.86
2533 3930 1.664321 GCGTCGTACTCCCACCAGAT 61.664 60.000 0.00 0.00 0.00 2.90
2534 3931 0.100682 CGTCGTACTCCCACCAGATG 59.899 60.000 0.00 0.00 0.00 2.90
2535 3932 1.183549 GTCGTACTCCCACCAGATGT 58.816 55.000 0.00 0.00 0.00 3.06
2536 3933 1.135083 GTCGTACTCCCACCAGATGTG 60.135 57.143 0.00 0.00 45.01 3.21
2564 3987 1.207089 TGTGGCGGAGAACTTAGATGG 59.793 52.381 0.00 0.00 0.00 3.51
2639 4115 4.680110 AGATAATACATTCGTGCGCTACAC 59.320 41.667 9.73 0.00 46.45 2.90
2755 4263 7.334921 TGAAATAACACCGGAACTATTCGAAAT 59.665 33.333 9.46 0.00 0.00 2.17
2756 4264 8.721019 AAATAACACCGGAACTATTCGAAATA 57.279 30.769 9.46 0.00 0.00 1.40
2757 4265 7.704789 ATAACACCGGAACTATTCGAAATAC 57.295 36.000 9.46 0.00 0.00 1.89
2783 4291 5.355350 AGCAATGTGGAAGTACAATTAGAGC 59.645 40.000 0.00 0.00 33.69 4.09
2789 4297 7.497249 ATGTGGAAGTACAATTAGAGCATCTTC 59.503 37.037 0.00 0.00 39.45 2.87
2810 4318 5.503662 TCAAGTTGCATTACATAGCCATG 57.496 39.130 0.00 0.00 38.21 3.66
2903 4755 3.426615 TCAAAAACAGTGGAGGTGTGTT 58.573 40.909 0.00 0.00 35.93 3.32
3206 6135 5.760253 ACAGAAGTACATGGTGAAAAGAGTG 59.240 40.000 0.00 0.00 0.00 3.51
3208 6137 6.260936 CAGAAGTACATGGTGAAAAGAGTGTT 59.739 38.462 0.00 0.00 0.00 3.32
3209 6138 6.828785 AGAAGTACATGGTGAAAAGAGTGTTT 59.171 34.615 0.00 0.00 0.00 2.83
3210 6139 7.339466 AGAAGTACATGGTGAAAAGAGTGTTTT 59.661 33.333 0.00 0.00 0.00 2.43
3211 6140 7.404671 AGTACATGGTGAAAAGAGTGTTTTT 57.595 32.000 0.00 0.00 33.19 1.94
3427 6401 5.817296 TGTTTCGTGAAATGATATCCCAGAG 59.183 40.000 0.00 0.00 32.36 3.35
3574 6550 1.682451 GCTACACCGGCATCTGGGTA 61.682 60.000 0.00 0.00 33.95 3.69
3729 6706 4.492895 GCTTTCACATTGTTGTTGCTTGTG 60.493 41.667 0.00 0.00 39.16 3.33
3766 6748 9.683069 GTTGATGAAATGTTGTTGTAATTCTCT 57.317 29.630 0.00 0.00 0.00 3.10
3846 6831 3.432326 GGGTCACCTAATTCTAGCTGTGG 60.432 52.174 0.00 0.00 0.00 4.17
3878 6863 5.862845 TCTCTCAAGAGTCAAGAAAGCAAT 58.137 37.500 6.91 0.00 42.60 3.56
3888 6873 0.250901 AGAAAGCAATGGTCACGCCT 60.251 50.000 0.00 0.00 38.35 5.52
3889 6874 0.109597 GAAAGCAATGGTCACGCCTG 60.110 55.000 0.00 0.00 38.35 4.85
3890 6875 0.823356 AAAGCAATGGTCACGCCTGT 60.823 50.000 0.00 0.00 38.35 4.00
3891 6876 0.036164 AAGCAATGGTCACGCCTGTA 59.964 50.000 0.00 0.00 38.35 2.74
3931 6942 6.885952 TTTAGGTTTTGAACGATCCATTCA 57.114 33.333 3.48 3.48 34.27 2.57
3960 6971 0.033504 CGGCATTAGTCGGCATACCT 59.966 55.000 0.00 0.00 39.69 3.08
4002 7013 1.814394 TCATCTTGCACATTCAGCACC 59.186 47.619 0.00 0.00 42.54 5.01
4003 7014 0.806868 ATCTTGCACATTCAGCACCG 59.193 50.000 0.00 0.00 42.54 4.94
4011 7022 1.470098 ACATTCAGCACCGCTTTCATC 59.530 47.619 0.00 0.00 36.40 2.92
4020 7031 2.690497 CACCGCTTTCATCTCCTCTCTA 59.310 50.000 0.00 0.00 0.00 2.43
4028 7039 3.550820 TCATCTCCTCTCTAGTGCTCAC 58.449 50.000 0.00 0.00 0.00 3.51
4029 7040 2.031258 TCTCCTCTCTAGTGCTCACG 57.969 55.000 0.00 0.00 36.20 4.35
4032 7043 1.213182 TCCTCTCTAGTGCTCACGGAT 59.787 52.381 0.00 0.00 36.20 4.18
4039 7052 1.568504 AGTGCTCACGGATTCCCTTA 58.431 50.000 0.00 0.00 36.20 2.69
4046 7059 1.831736 CACGGATTCCCTTACTGGAGT 59.168 52.381 0.00 0.00 38.35 3.85
4047 7060 3.028850 CACGGATTCCCTTACTGGAGTA 58.971 50.000 0.00 0.00 38.35 2.59
4048 7061 3.449737 CACGGATTCCCTTACTGGAGTAA 59.550 47.826 0.00 0.00 38.10 2.24
4049 7062 4.081309 CACGGATTCCCTTACTGGAGTAAA 60.081 45.833 0.00 0.00 39.70 2.01
4050 7063 4.161754 ACGGATTCCCTTACTGGAGTAAAG 59.838 45.833 0.00 0.00 39.70 1.85
4051 7064 4.404715 CGGATTCCCTTACTGGAGTAAAGA 59.595 45.833 0.00 0.00 39.70 2.52
4052 7065 5.452077 CGGATTCCCTTACTGGAGTAAAGAG 60.452 48.000 0.00 0.00 39.70 2.85
4053 7066 5.661759 GGATTCCCTTACTGGAGTAAAGAGA 59.338 44.000 1.10 0.00 39.70 3.10
4054 7067 5.997384 TTCCCTTACTGGAGTAAAGAGAC 57.003 43.478 1.10 0.00 39.70 3.36
4055 7068 5.006896 TCCCTTACTGGAGTAAAGAGACA 57.993 43.478 1.10 0.00 39.70 3.41
4056 7069 5.399991 TCCCTTACTGGAGTAAAGAGACAA 58.600 41.667 1.10 0.00 39.70 3.18
4057 7070 6.023603 TCCCTTACTGGAGTAAAGAGACAAT 58.976 40.000 1.10 0.00 39.70 2.71
4058 7071 6.500751 TCCCTTACTGGAGTAAAGAGACAATT 59.499 38.462 1.10 0.00 39.70 2.32
4059 7072 7.017254 TCCCTTACTGGAGTAAAGAGACAATTT 59.983 37.037 1.10 0.00 39.70 1.82
4060 7073 7.119846 CCCTTACTGGAGTAAAGAGACAATTTG 59.880 40.741 1.10 0.00 39.70 2.32
4061 7074 7.661847 CCTTACTGGAGTAAAGAGACAATTTGT 59.338 37.037 0.63 0.63 39.70 2.83
4062 7075 8.603242 TTACTGGAGTAAAGAGACAATTTGTC 57.397 34.615 19.64 19.64 41.02 3.18
4063 7076 8.208224 TTACTGGAGTAAAGAGACAATTTGTCA 58.792 33.333 26.73 7.26 42.00 3.58
4078 7091 9.844790 GACAATTTGTCAAGAATGATATGTTGA 57.155 29.630 21.75 0.00 46.22 3.18
4079 7092 9.630098 ACAATTTGTCAAGAATGATATGTTGAC 57.370 29.630 9.57 9.57 45.93 3.18
4080 7093 9.850628 CAATTTGTCAAGAATGATATGTTGACT 57.149 29.630 15.38 0.00 45.92 3.41
4082 7095 9.850628 ATTTGTCAAGAATGATATGTTGACTTG 57.149 29.630 15.38 0.00 45.92 3.16
4083 7096 8.620116 TTGTCAAGAATGATATGTTGACTTGA 57.380 30.769 15.38 0.00 45.92 3.02
4084 7097 8.260270 TGTCAAGAATGATATGTTGACTTGAG 57.740 34.615 15.38 0.00 45.92 3.02
4085 7098 8.096414 TGTCAAGAATGATATGTTGACTTGAGA 58.904 33.333 15.38 0.00 45.92 3.27
4086 7099 8.386606 GTCAAGAATGATATGTTGACTTGAGAC 58.613 37.037 0.00 0.00 43.55 3.36
4087 7100 7.550551 TCAAGAATGATATGTTGACTTGAGACC 59.449 37.037 0.00 0.00 37.77 3.85
4088 7101 6.352516 AGAATGATATGTTGACTTGAGACCC 58.647 40.000 0.00 0.00 0.00 4.46
4089 7102 4.123497 TGATATGTTGACTTGAGACCCG 57.877 45.455 0.00 0.00 0.00 5.28
4090 7103 3.767131 TGATATGTTGACTTGAGACCCGA 59.233 43.478 0.00 0.00 0.00 5.14
4091 7104 2.457366 ATGTTGACTTGAGACCCGAC 57.543 50.000 0.00 0.00 0.00 4.79
4092 7105 1.116308 TGTTGACTTGAGACCCGACA 58.884 50.000 0.00 0.00 0.00 4.35
4093 7106 1.068588 TGTTGACTTGAGACCCGACAG 59.931 52.381 0.00 0.00 0.00 3.51
4094 7107 1.068741 GTTGACTTGAGACCCGACAGT 59.931 52.381 0.00 0.00 0.00 3.55
4095 7108 2.281539 TGACTTGAGACCCGACAGTA 57.718 50.000 0.00 0.00 0.00 2.74
4096 7109 2.803956 TGACTTGAGACCCGACAGTAT 58.196 47.619 0.00 0.00 0.00 2.12
4097 7110 2.492088 TGACTTGAGACCCGACAGTATG 59.508 50.000 0.00 0.00 46.00 2.39
4098 7111 1.204941 ACTTGAGACCCGACAGTATGC 59.795 52.381 0.00 0.00 42.53 3.14
4099 7112 1.204704 CTTGAGACCCGACAGTATGCA 59.795 52.381 0.00 0.00 42.53 3.96
4100 7113 0.817654 TGAGACCCGACAGTATGCAG 59.182 55.000 0.00 0.00 42.53 4.41
4101 7114 1.103803 GAGACCCGACAGTATGCAGA 58.896 55.000 0.00 0.00 42.53 4.26
4102 7115 0.818296 AGACCCGACAGTATGCAGAC 59.182 55.000 2.46 2.46 42.53 3.51
4103 7116 0.818296 GACCCGACAGTATGCAGACT 59.182 55.000 8.51 8.51 42.53 3.24
4104 7117 2.022195 GACCCGACAGTATGCAGACTA 58.978 52.381 14.71 0.00 42.53 2.59
4105 7118 2.623889 GACCCGACAGTATGCAGACTAT 59.376 50.000 14.71 1.63 42.53 2.12
4106 7119 2.623889 ACCCGACAGTATGCAGACTATC 59.376 50.000 14.71 12.06 42.53 2.08
4107 7120 2.623416 CCCGACAGTATGCAGACTATCA 59.377 50.000 18.98 0.00 42.53 2.15
4108 7121 3.068165 CCCGACAGTATGCAGACTATCAA 59.932 47.826 18.98 0.00 42.53 2.57
4109 7122 4.262207 CCCGACAGTATGCAGACTATCAAT 60.262 45.833 18.98 1.36 42.53 2.57
4110 7123 5.048013 CCCGACAGTATGCAGACTATCAATA 60.048 44.000 18.98 0.00 42.53 1.90
4111 7124 6.089476 CCGACAGTATGCAGACTATCAATAG 58.911 44.000 18.98 5.94 42.53 1.73
4112 7125 5.570973 CGACAGTATGCAGACTATCAATAGC 59.429 44.000 18.98 0.00 42.53 2.97
4113 7126 6.410942 ACAGTATGCAGACTATCAATAGCA 57.589 37.500 14.71 0.00 42.53 3.49
4114 7127 6.820335 ACAGTATGCAGACTATCAATAGCAA 58.180 36.000 14.71 0.00 42.53 3.91
4115 7128 7.275183 ACAGTATGCAGACTATCAATAGCAAA 58.725 34.615 14.71 0.00 42.53 3.68
4116 7129 7.770433 ACAGTATGCAGACTATCAATAGCAAAA 59.230 33.333 14.71 0.00 42.53 2.44
4117 7130 8.615211 CAGTATGCAGACTATCAATAGCAAAAA 58.385 33.333 14.71 0.00 35.45 1.94
4139 7152 6.879188 AAAACAAAGTGGTTGACAAATACG 57.121 33.333 0.00 0.00 39.87 3.06
4140 7153 5.570234 AACAAAGTGGTTGACAAATACGT 57.430 34.783 0.00 0.00 39.87 3.57
4141 7154 6.680874 AACAAAGTGGTTGACAAATACGTA 57.319 33.333 0.00 0.00 39.87 3.57
4142 7155 6.295039 ACAAAGTGGTTGACAAATACGTAG 57.705 37.500 0.08 0.00 39.87 3.51
4143 7156 6.050432 ACAAAGTGGTTGACAAATACGTAGA 58.950 36.000 0.08 0.00 39.87 2.59
4144 7157 6.202188 ACAAAGTGGTTGACAAATACGTAGAG 59.798 38.462 0.08 0.00 39.87 2.43
4145 7158 5.464030 AGTGGTTGACAAATACGTAGAGT 57.536 39.130 0.08 0.00 0.00 3.24
4146 7159 5.227908 AGTGGTTGACAAATACGTAGAGTG 58.772 41.667 0.08 1.47 0.00 3.51
4147 7160 3.991773 TGGTTGACAAATACGTAGAGTGC 59.008 43.478 0.08 0.00 0.00 4.40
4148 7161 3.991773 GGTTGACAAATACGTAGAGTGCA 59.008 43.478 0.08 0.00 0.00 4.57
4149 7162 4.630069 GGTTGACAAATACGTAGAGTGCAT 59.370 41.667 0.08 0.00 0.00 3.96
4150 7163 5.220416 GGTTGACAAATACGTAGAGTGCATC 60.220 44.000 0.08 0.00 0.00 3.91
4151 7164 5.324784 TGACAAATACGTAGAGTGCATCT 57.675 39.130 0.08 0.00 42.47 2.90
4152 7165 5.340803 TGACAAATACGTAGAGTGCATCTC 58.659 41.667 0.08 7.88 43.05 2.75
4189 7202 9.759473 TTCTTTTTGAGGGAAATATCTTGATCT 57.241 29.630 0.00 0.00 0.00 2.75
4190 7203 9.759473 TCTTTTTGAGGGAAATATCTTGATCTT 57.241 29.630 0.00 0.00 0.00 2.40
4191 7204 9.798994 CTTTTTGAGGGAAATATCTTGATCTTG 57.201 33.333 0.00 0.00 0.00 3.02
4192 7205 8.884124 TTTTGAGGGAAATATCTTGATCTTGT 57.116 30.769 0.00 0.00 0.00 3.16
4193 7206 8.884124 TTTGAGGGAAATATCTTGATCTTGTT 57.116 30.769 0.00 0.00 0.00 2.83
4194 7207 7.870509 TGAGGGAAATATCTTGATCTTGTTG 57.129 36.000 0.00 0.00 0.00 3.33
4195 7208 7.632861 TGAGGGAAATATCTTGATCTTGTTGA 58.367 34.615 0.00 0.00 0.00 3.18
4196 7209 8.108999 TGAGGGAAATATCTTGATCTTGTTGAA 58.891 33.333 0.00 0.00 0.00 2.69
4197 7210 8.286191 AGGGAAATATCTTGATCTTGTTGAAC 57.714 34.615 0.00 0.00 0.00 3.18
4198 7211 7.890127 AGGGAAATATCTTGATCTTGTTGAACA 59.110 33.333 0.00 0.00 0.00 3.18
4199 7212 8.186821 GGGAAATATCTTGATCTTGTTGAACAG 58.813 37.037 0.00 0.00 0.00 3.16
4200 7213 7.699812 GGAAATATCTTGATCTTGTTGAACAGC 59.300 37.037 0.00 0.00 0.00 4.40
4201 7214 7.692460 AATATCTTGATCTTGTTGAACAGCA 57.308 32.000 0.00 0.00 0.00 4.41
4202 7215 7.692460 ATATCTTGATCTTGTTGAACAGCAA 57.308 32.000 0.00 4.29 0.00 3.91
4203 7216 5.428496 TCTTGATCTTGTTGAACAGCAAG 57.572 39.130 19.90 19.90 46.64 4.01
4220 7233 4.599047 GCAAGAGCTATGTATCACCTCT 57.401 45.455 0.00 0.00 37.91 3.69
4221 7234 5.713792 GCAAGAGCTATGTATCACCTCTA 57.286 43.478 0.00 0.00 37.91 2.43
4222 7235 5.708948 GCAAGAGCTATGTATCACCTCTAG 58.291 45.833 0.00 0.00 37.91 2.43
4223 7236 5.242838 GCAAGAGCTATGTATCACCTCTAGT 59.757 44.000 0.00 0.00 37.91 2.57
4224 7237 6.569610 GCAAGAGCTATGTATCACCTCTAGTC 60.570 46.154 0.00 0.00 37.91 2.59
4225 7238 6.194285 AGAGCTATGTATCACCTCTAGTCA 57.806 41.667 0.00 0.00 31.55 3.41
4226 7239 6.789268 AGAGCTATGTATCACCTCTAGTCAT 58.211 40.000 0.00 0.00 31.55 3.06
4227 7240 7.237982 AGAGCTATGTATCACCTCTAGTCATT 58.762 38.462 0.00 0.00 31.55 2.57
4228 7241 7.393234 AGAGCTATGTATCACCTCTAGTCATTC 59.607 40.741 0.00 0.00 31.55 2.67
4229 7242 6.435904 AGCTATGTATCACCTCTAGTCATTCC 59.564 42.308 0.00 0.00 0.00 3.01
4230 7243 6.435904 GCTATGTATCACCTCTAGTCATTCCT 59.564 42.308 0.00 0.00 0.00 3.36
4231 7244 7.612244 GCTATGTATCACCTCTAGTCATTCCTA 59.388 40.741 0.00 0.00 0.00 2.94
4232 7245 9.521841 CTATGTATCACCTCTAGTCATTCCTAA 57.478 37.037 0.00 0.00 0.00 2.69
4233 7246 8.964533 ATGTATCACCTCTAGTCATTCCTAAT 57.035 34.615 0.00 0.00 0.00 1.73
4235 7248 9.298250 TGTATCACCTCTAGTCATTCCTAATAC 57.702 37.037 0.00 0.00 0.00 1.89
4236 7249 6.879276 TCACCTCTAGTCATTCCTAATACG 57.121 41.667 0.00 0.00 0.00 3.06
4237 7250 6.363065 TCACCTCTAGTCATTCCTAATACGT 58.637 40.000 0.00 0.00 0.00 3.57
4238 7251 6.485984 TCACCTCTAGTCATTCCTAATACGTC 59.514 42.308 0.00 0.00 0.00 4.34
4239 7252 6.487331 CACCTCTAGTCATTCCTAATACGTCT 59.513 42.308 0.00 0.00 0.00 4.18
4240 7253 7.013464 CACCTCTAGTCATTCCTAATACGTCTT 59.987 40.741 0.00 0.00 0.00 3.01
4241 7254 7.560626 ACCTCTAGTCATTCCTAATACGTCTTT 59.439 37.037 0.00 0.00 0.00 2.52
4242 7255 8.414778 CCTCTAGTCATTCCTAATACGTCTTTT 58.585 37.037 0.00 0.00 0.00 2.27
4243 7256 9.804758 CTCTAGTCATTCCTAATACGTCTTTTT 57.195 33.333 0.00 0.00 0.00 1.94
4269 7282 9.941664 TTTTAGAACTATTCCTAATACGTCTCG 57.058 33.333 0.00 0.00 0.00 4.04
4270 7283 5.999721 AGAACTATTCCTAATACGTCTCGC 58.000 41.667 0.00 0.00 0.00 5.03
4271 7284 4.762956 ACTATTCCTAATACGTCTCGCC 57.237 45.455 0.00 0.00 0.00 5.54
4272 7285 4.396522 ACTATTCCTAATACGTCTCGCCT 58.603 43.478 0.00 0.00 0.00 5.52
4273 7286 5.555017 ACTATTCCTAATACGTCTCGCCTA 58.445 41.667 0.00 0.00 0.00 3.93
4274 7287 4.762956 ATTCCTAATACGTCTCGCCTAC 57.237 45.455 0.00 0.00 0.00 3.18
4275 7288 3.198409 TCCTAATACGTCTCGCCTACA 57.802 47.619 0.00 0.00 0.00 2.74
4276 7289 3.136763 TCCTAATACGTCTCGCCTACAG 58.863 50.000 0.00 0.00 0.00 2.74
4277 7290 2.350580 CCTAATACGTCTCGCCTACAGC 60.351 54.545 0.00 0.00 38.52 4.40
4278 7291 1.100510 AATACGTCTCGCCTACAGCA 58.899 50.000 0.00 0.00 44.04 4.41
4279 7292 1.100510 ATACGTCTCGCCTACAGCAA 58.899 50.000 0.00 0.00 44.04 3.91
4280 7293 0.450583 TACGTCTCGCCTACAGCAAG 59.549 55.000 0.00 0.00 44.04 4.01
4281 7294 1.517257 CGTCTCGCCTACAGCAAGG 60.517 63.158 0.00 0.00 44.04 3.61
4290 7303 1.670811 CCTACAGCAAGGCGTTATTGG 59.329 52.381 0.00 0.00 0.00 3.16
4291 7304 1.064060 CTACAGCAAGGCGTTATTGGC 59.936 52.381 0.00 0.00 0.00 4.52
4310 7323 4.129757 CGGCCCAATACCGTAACC 57.870 61.111 0.00 0.00 45.70 2.85
4311 7324 1.221293 CGGCCCAATACCGTAACCA 59.779 57.895 0.00 0.00 45.70 3.67
4312 7325 1.091197 CGGCCCAATACCGTAACCAC 61.091 60.000 0.00 0.00 45.70 4.16
4313 7326 0.253894 GGCCCAATACCGTAACCACT 59.746 55.000 0.00 0.00 0.00 4.00
4314 7327 1.660167 GCCCAATACCGTAACCACTC 58.340 55.000 0.00 0.00 0.00 3.51
4315 7328 1.744798 GCCCAATACCGTAACCACTCC 60.745 57.143 0.00 0.00 0.00 3.85
4316 7329 1.134310 CCCAATACCGTAACCACTCCC 60.134 57.143 0.00 0.00 0.00 4.30
4317 7330 1.555992 CCAATACCGTAACCACTCCCA 59.444 52.381 0.00 0.00 0.00 4.37
4318 7331 2.027007 CCAATACCGTAACCACTCCCAA 60.027 50.000 0.00 0.00 0.00 4.12
4319 7332 3.267483 CAATACCGTAACCACTCCCAAG 58.733 50.000 0.00 0.00 0.00 3.61
4320 7333 1.269012 TACCGTAACCACTCCCAAGG 58.731 55.000 0.00 0.00 0.00 3.61
4321 7334 0.765519 ACCGTAACCACTCCCAAGGT 60.766 55.000 0.00 0.00 40.61 3.50
4322 7335 0.036671 CCGTAACCACTCCCAAGGTC 60.037 60.000 0.00 0.00 37.07 3.85
4323 7336 0.682852 CGTAACCACTCCCAAGGTCA 59.317 55.000 0.00 0.00 37.07 4.02
4324 7337 1.278127 CGTAACCACTCCCAAGGTCAT 59.722 52.381 0.00 0.00 37.07 3.06
4325 7338 2.290071 CGTAACCACTCCCAAGGTCATT 60.290 50.000 0.00 0.00 37.07 2.57
4326 7339 3.763057 GTAACCACTCCCAAGGTCATTT 58.237 45.455 0.00 0.00 37.07 2.32
4327 7340 4.563993 CGTAACCACTCCCAAGGTCATTTA 60.564 45.833 0.00 0.00 37.07 1.40
4328 7341 4.675063 AACCACTCCCAAGGTCATTTAT 57.325 40.909 0.00 0.00 37.07 1.40
4329 7342 3.968265 ACCACTCCCAAGGTCATTTATG 58.032 45.455 0.00 0.00 30.79 1.90
4330 7343 3.591527 ACCACTCCCAAGGTCATTTATGA 59.408 43.478 0.00 0.00 30.79 2.15
4346 7359 9.620660 GTCATTTATGACGTTCTTTTACCATTT 57.379 29.630 7.08 0.00 46.46 2.32
4350 7363 9.804758 TTTATGACGTTCTTTTACCATTTTTGT 57.195 25.926 0.00 0.00 0.00 2.83
4351 7364 7.924103 ATGACGTTCTTTTACCATTTTTGTC 57.076 32.000 0.00 0.00 0.00 3.18
4352 7365 6.853720 TGACGTTCTTTTACCATTTTTGTCA 58.146 32.000 0.00 0.00 0.00 3.58
4353 7366 6.748198 TGACGTTCTTTTACCATTTTTGTCAC 59.252 34.615 0.00 0.00 0.00 3.67
4354 7367 6.859017 ACGTTCTTTTACCATTTTTGTCACT 58.141 32.000 0.00 0.00 0.00 3.41
4355 7368 6.750039 ACGTTCTTTTACCATTTTTGTCACTG 59.250 34.615 0.00 0.00 0.00 3.66
4356 7369 6.750039 CGTTCTTTTACCATTTTTGTCACTGT 59.250 34.615 0.00 0.00 0.00 3.55
4357 7370 7.274686 CGTTCTTTTACCATTTTTGTCACTGTT 59.725 33.333 0.00 0.00 0.00 3.16
4358 7371 8.931775 GTTCTTTTACCATTTTTGTCACTGTTT 58.068 29.630 0.00 0.00 0.00 2.83
4359 7372 9.495572 TTCTTTTACCATTTTTGTCACTGTTTT 57.504 25.926 0.00 0.00 0.00 2.43
4360 7373 8.930760 TCTTTTACCATTTTTGTCACTGTTTTG 58.069 29.630 0.00 0.00 0.00 2.44
4361 7374 6.654793 TTACCATTTTTGTCACTGTTTTGC 57.345 33.333 0.00 0.00 0.00 3.68
4362 7375 4.573900 ACCATTTTTGTCACTGTTTTGCA 58.426 34.783 0.00 0.00 0.00 4.08
4363 7376 5.184711 ACCATTTTTGTCACTGTTTTGCAT 58.815 33.333 0.00 0.00 0.00 3.96
4364 7377 5.294060 ACCATTTTTGTCACTGTTTTGCATC 59.706 36.000 0.00 0.00 0.00 3.91
4365 7378 5.293814 CCATTTTTGTCACTGTTTTGCATCA 59.706 36.000 0.00 0.00 0.00 3.07
4366 7379 6.415702 CATTTTTGTCACTGTTTTGCATCAG 58.584 36.000 10.95 10.95 37.65 2.90
4367 7380 4.717233 TTTGTCACTGTTTTGCATCAGT 57.283 36.364 11.98 11.98 44.32 3.41
4368 7381 4.717233 TTGTCACTGTTTTGCATCAGTT 57.283 36.364 14.20 2.05 42.05 3.16
4369 7382 4.717233 TGTCACTGTTTTGCATCAGTTT 57.283 36.364 14.20 0.00 42.05 2.66
4370 7383 5.070770 TGTCACTGTTTTGCATCAGTTTT 57.929 34.783 14.20 0.00 42.05 2.43
4371 7384 5.101628 TGTCACTGTTTTGCATCAGTTTTC 58.898 37.500 14.20 9.68 42.05 2.29
4372 7385 5.105797 TGTCACTGTTTTGCATCAGTTTTCT 60.106 36.000 14.20 0.00 42.05 2.52
4373 7386 5.807011 GTCACTGTTTTGCATCAGTTTTCTT 59.193 36.000 14.20 0.00 42.05 2.52
4374 7387 6.311200 GTCACTGTTTTGCATCAGTTTTCTTT 59.689 34.615 14.20 0.00 42.05 2.52
4375 7388 6.310956 TCACTGTTTTGCATCAGTTTTCTTTG 59.689 34.615 14.20 5.24 42.05 2.77
4376 7389 6.091169 CACTGTTTTGCATCAGTTTTCTTTGT 59.909 34.615 14.20 0.00 42.05 2.83
4377 7390 6.650390 ACTGTTTTGCATCAGTTTTCTTTGTT 59.350 30.769 11.98 0.00 41.33 2.83
4378 7391 7.173047 ACTGTTTTGCATCAGTTTTCTTTGTTT 59.827 29.630 11.98 0.00 41.33 2.83
4379 7392 7.869800 TGTTTTGCATCAGTTTTCTTTGTTTT 58.130 26.923 0.00 0.00 0.00 2.43
4380 7393 8.348507 TGTTTTGCATCAGTTTTCTTTGTTTTT 58.651 25.926 0.00 0.00 0.00 1.94
4405 7418 9.567776 TTTTTCTTTCTTTCTTTGGGTTTTCTT 57.432 25.926 0.00 0.00 0.00 2.52
4418 7431 9.816354 CTTTGGGTTTTCTTATTTCTTTTCTCA 57.184 29.630 0.00 0.00 0.00 3.27
4421 7434 9.594478 TGGGTTTTCTTATTTCTTTTCTCAAAC 57.406 29.630 0.00 0.00 0.00 2.93
4422 7435 9.594478 GGGTTTTCTTATTTCTTTTCTCAAACA 57.406 29.630 0.00 0.00 0.00 2.83
4640 7653 8.891671 ACATTTTTCAAACATATGCTTTGACT 57.108 26.923 22.23 11.73 37.36 3.41
4641 7654 9.328845 ACATTTTTCAAACATATGCTTTGACTT 57.671 25.926 22.23 11.61 37.36 3.01
4805 7818 9.584839 GAAACATGTGAACAATTCTTTTAATGC 57.415 29.630 0.00 0.00 0.00 3.56
4806 7819 8.659925 AACATGTGAACAATTCTTTTAATGCA 57.340 26.923 0.00 0.00 0.00 3.96
4807 7820 8.075593 ACATGTGAACAATTCTTTTAATGCAC 57.924 30.769 0.00 0.00 0.00 4.57
4808 7821 7.927629 ACATGTGAACAATTCTTTTAATGCACT 59.072 29.630 0.00 0.00 0.00 4.40
4809 7822 7.928908 TGTGAACAATTCTTTTAATGCACTC 57.071 32.000 0.00 0.00 0.00 3.51
4810 7823 7.715657 TGTGAACAATTCTTTTAATGCACTCT 58.284 30.769 0.00 0.00 0.00 3.24
4811 7824 8.845227 TGTGAACAATTCTTTTAATGCACTCTA 58.155 29.630 0.00 0.00 0.00 2.43
4812 7825 9.118236 GTGAACAATTCTTTTAATGCACTCTAC 57.882 33.333 0.00 0.00 0.00 2.59
4813 7826 8.845227 TGAACAATTCTTTTAATGCACTCTACA 58.155 29.630 0.00 0.00 0.00 2.74
4814 7827 9.846248 GAACAATTCTTTTAATGCACTCTACAT 57.154 29.630 0.00 0.00 0.00 2.29
4824 7837 9.809096 TTTAATGCACTCTACATTTGTTTTTGA 57.191 25.926 0.00 0.00 38.62 2.69
4825 7838 9.809096 TTAATGCACTCTACATTTGTTTTTGAA 57.191 25.926 0.00 0.00 38.62 2.69
4826 7839 8.891671 AATGCACTCTACATTTGTTTTTGAAT 57.108 26.923 0.00 0.00 34.05 2.57
4827 7840 8.891671 ATGCACTCTACATTTGTTTTTGAATT 57.108 26.923 0.00 0.00 0.00 2.17
4828 7841 8.129161 TGCACTCTACATTTGTTTTTGAATTG 57.871 30.769 0.00 0.00 0.00 2.32
4829 7842 7.763528 TGCACTCTACATTTGTTTTTGAATTGT 59.236 29.630 0.00 0.00 0.00 2.71
4830 7843 9.243637 GCACTCTACATTTGTTTTTGAATTGTA 57.756 29.630 0.00 0.00 0.00 2.41
4893 7906 8.861033 TTCAATATAAAACGCTACGTAGATGT 57.139 30.769 26.53 19.16 39.99 3.06
4894 7907 8.861033 TCAATATAAAACGCTACGTAGATGTT 57.139 30.769 26.53 23.33 39.99 2.71
4895 7908 9.304731 TCAATATAAAACGCTACGTAGATGTTT 57.695 29.630 27.10 27.10 39.99 2.83
4896 7909 9.564041 CAATATAAAACGCTACGTAGATGTTTC 57.436 33.333 30.06 13.52 39.99 2.78
4897 7910 9.525409 AATATAAAACGCTACGTAGATGTTTCT 57.475 29.630 30.06 24.65 39.99 2.52
4898 7911 5.511088 AAAACGCTACGTAGATGTTTCTG 57.489 39.130 30.06 13.28 39.99 3.02
4899 7912 4.430137 AACGCTACGTAGATGTTTCTGA 57.570 40.909 26.53 0.00 39.99 3.27
4900 7913 4.430137 ACGCTACGTAGATGTTTCTGAA 57.570 40.909 26.53 0.00 38.73 3.02
4901 7914 4.801891 ACGCTACGTAGATGTTTCTGAAA 58.198 39.130 26.53 0.00 38.73 2.69
4902 7915 5.408356 ACGCTACGTAGATGTTTCTGAAAT 58.592 37.500 26.53 0.00 38.73 2.17
4903 7916 5.288712 ACGCTACGTAGATGTTTCTGAAATG 59.711 40.000 26.53 0.00 38.73 2.32
4904 7917 5.515270 CGCTACGTAGATGTTTCTGAAATGA 59.485 40.000 26.53 0.00 33.17 2.57
4905 7918 6.291322 CGCTACGTAGATGTTTCTGAAATGAG 60.291 42.308 26.53 0.00 33.17 2.90
4906 7919 6.531948 GCTACGTAGATGTTTCTGAAATGAGT 59.468 38.462 26.53 3.60 33.17 3.41
4907 7920 6.712241 ACGTAGATGTTTCTGAAATGAGTG 57.288 37.500 6.06 0.00 33.17 3.51
4908 7921 6.455647 ACGTAGATGTTTCTGAAATGAGTGA 58.544 36.000 6.06 0.00 33.17 3.41
4909 7922 6.929049 ACGTAGATGTTTCTGAAATGAGTGAA 59.071 34.615 6.06 0.00 33.17 3.18
4910 7923 7.095607 ACGTAGATGTTTCTGAAATGAGTGAAC 60.096 37.037 6.06 0.00 33.17 3.18
4911 7924 7.095649 CGTAGATGTTTCTGAAATGAGTGAACA 60.096 37.037 6.06 0.00 33.17 3.18
4912 7925 7.756395 AGATGTTTCTGAAATGAGTGAACAT 57.244 32.000 6.06 3.19 0.00 2.71
4913 7926 8.174733 AGATGTTTCTGAAATGAGTGAACATT 57.825 30.769 6.06 0.00 41.43 2.71
4915 7928 9.897744 GATGTTTCTGAAATGAGTGAACATTTA 57.102 29.630 6.06 0.00 46.18 1.40
4921 7934 9.950680 TCTGAAATGAGTGAACATTTAAAAGAC 57.049 29.630 0.00 0.00 46.18 3.01
4922 7935 9.734620 CTGAAATGAGTGAACATTTAAAAGACA 57.265 29.630 0.00 0.00 46.18 3.41
4923 7936 9.515020 TGAAATGAGTGAACATTTAAAAGACAC 57.485 29.630 0.00 13.17 46.18 3.67
4924 7937 8.560576 AAATGAGTGAACATTTAAAAGACACG 57.439 30.769 0.00 0.00 44.97 4.49
4925 7938 6.912203 TGAGTGAACATTTAAAAGACACGA 57.088 33.333 14.26 7.42 33.00 4.35
4926 7939 7.310072 TGAGTGAACATTTAAAAGACACGAA 57.690 32.000 14.26 8.24 33.00 3.85
4927 7940 7.184106 TGAGTGAACATTTAAAAGACACGAAC 58.816 34.615 14.26 11.83 33.00 3.95
4928 7941 6.189567 AGTGAACATTTAAAAGACACGAACG 58.810 36.000 14.26 0.00 33.00 3.95
4929 7942 5.961263 GTGAACATTTAAAAGACACGAACGT 59.039 36.000 0.00 0.00 0.00 3.99
4930 7943 6.466730 GTGAACATTTAAAAGACACGAACGTT 59.533 34.615 0.00 0.00 0.00 3.99
4931 7944 7.007636 GTGAACATTTAAAAGACACGAACGTTT 59.992 33.333 0.46 0.00 0.00 3.60
4932 7945 7.537991 TGAACATTTAAAAGACACGAACGTTTT 59.462 29.630 0.46 0.00 0.00 2.43
4933 7946 7.800015 ACATTTAAAAGACACGAACGTTTTT 57.200 28.000 0.46 11.13 0.00 1.94
4957 7970 9.838339 TTTTTCAAAGCTATCAACCCATTTTAA 57.162 25.926 0.00 0.00 0.00 1.52
4958 7971 9.838339 TTTTCAAAGCTATCAACCCATTTTAAA 57.162 25.926 0.00 0.00 0.00 1.52
4959 7972 9.838339 TTTCAAAGCTATCAACCCATTTTAAAA 57.162 25.926 2.51 2.51 0.00 1.52
4960 7973 9.838339 TTCAAAGCTATCAACCCATTTTAAAAA 57.162 25.926 4.44 0.00 0.00 1.94
5002 8015 8.986477 ACACTGCATTACCATTTCTAAAATTC 57.014 30.769 0.00 0.00 0.00 2.17
5003 8016 8.584157 ACACTGCATTACCATTTCTAAAATTCA 58.416 29.630 0.00 0.00 0.00 2.57
5004 8017 9.421806 CACTGCATTACCATTTCTAAAATTCAA 57.578 29.630 0.00 0.00 0.00 2.69
5005 8018 9.643693 ACTGCATTACCATTTCTAAAATTCAAG 57.356 29.630 0.00 0.00 0.00 3.02
5006 8019 9.090692 CTGCATTACCATTTCTAAAATTCAAGG 57.909 33.333 0.00 0.00 0.00 3.61
5007 8020 8.592809 TGCATTACCATTTCTAAAATTCAAGGT 58.407 29.630 0.00 0.00 0.00 3.50
5008 8021 9.435688 GCATTACCATTTCTAAAATTCAAGGTT 57.564 29.630 0.00 0.00 0.00 3.50
5013 8026 9.898152 ACCATTTCTAAAATTCAAGGTTTTTGA 57.102 25.926 0.00 0.00 31.71 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.900983 TTTTATTATTTGCTCACTGCCTTTTT 57.099 26.923 0.00 0.00 42.00 1.94
26 27 8.367156 TCTTTTATTATTTGCTCACTGCCTTTT 58.633 29.630 0.00 0.00 42.00 2.27
27 28 7.895759 TCTTTTATTATTTGCTCACTGCCTTT 58.104 30.769 0.00 0.00 42.00 3.11
28 29 7.394359 TCTCTTTTATTATTTGCTCACTGCCTT 59.606 33.333 0.00 0.00 42.00 4.35
29 30 6.886459 TCTCTTTTATTATTTGCTCACTGCCT 59.114 34.615 0.00 0.00 42.00 4.75
30 31 7.088589 TCTCTTTTATTATTTGCTCACTGCC 57.911 36.000 0.00 0.00 42.00 4.85
31 32 8.023128 TGTTCTCTTTTATTATTTGCTCACTGC 58.977 33.333 0.00 0.00 43.25 4.40
34 35 9.846248 ACATGTTCTCTTTTATTATTTGCTCAC 57.154 29.630 0.00 0.00 0.00 3.51
35 36 9.844790 CACATGTTCTCTTTTATTATTTGCTCA 57.155 29.630 0.00 0.00 0.00 4.26
42 43 8.680903 CCTGCTTCACATGTTCTCTTTTATTAT 58.319 33.333 0.00 0.00 0.00 1.28
43 44 7.362056 GCCTGCTTCACATGTTCTCTTTTATTA 60.362 37.037 0.00 0.00 0.00 0.98
56 57 3.457234 TCGTATTAGCCTGCTTCACATG 58.543 45.455 0.00 0.00 0.00 3.21
81 82 4.980339 AGGAGCCAAAACCAATTTCAAT 57.020 36.364 0.00 0.00 0.00 2.57
152 153 3.364460 TTGGTGAATGGGTGATGTAGG 57.636 47.619 0.00 0.00 0.00 3.18
153 154 4.156556 CAGTTTGGTGAATGGGTGATGTAG 59.843 45.833 0.00 0.00 0.00 2.74
154 155 4.078537 CAGTTTGGTGAATGGGTGATGTA 58.921 43.478 0.00 0.00 0.00 2.29
155 156 2.892852 CAGTTTGGTGAATGGGTGATGT 59.107 45.455 0.00 0.00 0.00 3.06
156 157 2.353011 GCAGTTTGGTGAATGGGTGATG 60.353 50.000 0.00 0.00 0.00 3.07
157 158 1.895131 GCAGTTTGGTGAATGGGTGAT 59.105 47.619 0.00 0.00 0.00 3.06
158 159 1.133513 AGCAGTTTGGTGAATGGGTGA 60.134 47.619 0.00 0.00 0.00 4.02
159 160 1.331214 AGCAGTTTGGTGAATGGGTG 58.669 50.000 0.00 0.00 0.00 4.61
160 161 1.688197 CAAGCAGTTTGGTGAATGGGT 59.312 47.619 0.00 0.00 32.95 4.51
161 162 1.962807 TCAAGCAGTTTGGTGAATGGG 59.037 47.619 0.00 0.00 37.39 4.00
168 169 4.973168 TGTATTCTCTCAAGCAGTTTGGT 58.027 39.130 0.00 0.00 37.39 3.67
321 380 9.784531 TGGTCTATTTTAGAATCAATCAGATCC 57.215 33.333 0.00 0.00 35.39 3.36
323 382 9.282569 GCTGGTCTATTTTAGAATCAATCAGAT 57.717 33.333 5.47 0.00 39.09 2.90
337 396 6.859112 TCTCTACTGAAGCTGGTCTATTTT 57.141 37.500 0.00 0.00 0.00 1.82
391 455 1.468520 CGGAATTATTATGGGGCGCAG 59.531 52.381 10.83 0.00 0.00 5.18
404 468 4.331968 AGAATTTGGAGTGCACGGAATTA 58.668 39.130 12.01 0.00 0.00 1.40
447 515 4.897224 ACGTTGATGCTTACATTTGATCG 58.103 39.130 0.00 0.00 36.35 3.69
479 547 4.046938 TCACCGCTCTATTTTAGCAGAG 57.953 45.455 0.00 0.00 40.08 3.35
483 556 4.270325 ACGAAATCACCGCTCTATTTTAGC 59.730 41.667 0.00 0.00 36.60 3.09
517 590 3.562973 CCTTCCATCTGTCCATTTCGATG 59.437 47.826 0.00 0.00 34.51 3.84
534 607 3.554960 GGTCTTTTGATTTGTGCCCTTCC 60.555 47.826 0.00 0.00 0.00 3.46
587 661 2.033194 CCTCGCTTCACGGAAACCC 61.033 63.158 0.00 0.00 43.89 4.11
588 662 1.005394 TCCTCGCTTCACGGAAACC 60.005 57.895 0.00 0.00 43.89 3.27
738 819 4.233005 ACGGTAGCTACGAAGTTTCTTTC 58.767 43.478 17.48 0.00 37.78 2.62
822 907 3.407698 TGTCCATGTGTCGTAGCAAATT 58.592 40.909 0.00 0.00 0.00 1.82
823 908 3.052455 TGTCCATGTGTCGTAGCAAAT 57.948 42.857 0.00 0.00 0.00 2.32
824 909 2.535012 TGTCCATGTGTCGTAGCAAA 57.465 45.000 0.00 0.00 0.00 3.68
825 910 2.616960 GATGTCCATGTGTCGTAGCAA 58.383 47.619 0.00 0.00 0.00 3.91
831 916 0.740868 AAGGCGATGTCCATGTGTCG 60.741 55.000 0.00 0.00 37.17 4.35
843 928 0.105964 TCCTCCAGCTAGAAGGCGAT 60.106 55.000 0.00 0.00 37.29 4.58
924 1023 3.020984 TGTCTGTCTGTCTGTGTGTGTA 58.979 45.455 0.00 0.00 0.00 2.90
926 1025 2.099756 TCTGTCTGTCTGTCTGTGTGTG 59.900 50.000 0.00 0.00 0.00 3.82
928 1027 2.620585 TCTCTGTCTGTCTGTCTGTGTG 59.379 50.000 0.00 0.00 0.00 3.82
929 1028 2.884012 CTCTCTGTCTGTCTGTCTGTGT 59.116 50.000 0.00 0.00 0.00 3.72
930 1029 3.145286 TCTCTCTGTCTGTCTGTCTGTG 58.855 50.000 0.00 0.00 0.00 3.66
936 1035 4.081476 TCTCTCTCTCTCTCTGTCTGTCTG 60.081 50.000 0.00 0.00 0.00 3.51
937 1036 4.096681 TCTCTCTCTCTCTCTGTCTGTCT 58.903 47.826 0.00 0.00 0.00 3.41
939 1038 4.096681 TCTCTCTCTCTCTCTCTGTCTGT 58.903 47.826 0.00 0.00 0.00 3.41
940 1039 4.403752 TCTCTCTCTCTCTCTCTCTGTCTG 59.596 50.000 0.00 0.00 0.00 3.51
941 1040 4.614475 TCTCTCTCTCTCTCTCTCTGTCT 58.386 47.826 0.00 0.00 0.00 3.41
942 1041 4.646945 TCTCTCTCTCTCTCTCTCTCTGTC 59.353 50.000 0.00 0.00 0.00 3.51
943 1042 4.614475 TCTCTCTCTCTCTCTCTCTCTGT 58.386 47.826 0.00 0.00 0.00 3.41
944 1043 4.892345 TCTCTCTCTCTCTCTCTCTCTCTG 59.108 50.000 0.00 0.00 0.00 3.35
945 1044 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
946 1045 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
947 1046 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
948 1047 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
949 1048 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
950 1049 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
951 1050 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
952 1051 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
953 1052 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
954 1053 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
955 1054 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
956 1055 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
957 1056 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
958 1057 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
959 1058 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
960 1059 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
961 1060 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
962 1061 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
963 1062 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
964 1063 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
965 1064 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
966 1065 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
967 1066 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
968 1067 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
969 1068 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
970 1069 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
971 1070 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
972 1071 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
973 1072 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
974 1073 4.280677 CCTCTCTCTCTCTCTCTCTCTCTC 59.719 54.167 0.00 0.00 0.00 3.20
975 1074 4.222336 CCTCTCTCTCTCTCTCTCTCTCT 58.778 52.174 0.00 0.00 0.00 3.10
976 1075 3.323403 CCCTCTCTCTCTCTCTCTCTCTC 59.677 56.522 0.00 0.00 0.00 3.20
977 1076 3.312890 CCCTCTCTCTCTCTCTCTCTCT 58.687 54.545 0.00 0.00 0.00 3.10
978 1077 2.224402 GCCCTCTCTCTCTCTCTCTCTC 60.224 59.091 0.00 0.00 0.00 3.20
979 1078 1.771255 GCCCTCTCTCTCTCTCTCTCT 59.229 57.143 0.00 0.00 0.00 3.10
980 1079 1.490490 TGCCCTCTCTCTCTCTCTCTC 59.510 57.143 0.00 0.00 0.00 3.20
981 1080 1.492176 CTGCCCTCTCTCTCTCTCTCT 59.508 57.143 0.00 0.00 0.00 3.10
982 1081 1.490490 TCTGCCCTCTCTCTCTCTCTC 59.510 57.143 0.00 0.00 0.00 3.20
983 1082 1.492176 CTCTGCCCTCTCTCTCTCTCT 59.508 57.143 0.00 0.00 0.00 3.10
984 1083 1.972872 CTCTGCCCTCTCTCTCTCTC 58.027 60.000 0.00 0.00 0.00 3.20
985 1084 0.106519 GCTCTGCCCTCTCTCTCTCT 60.107 60.000 0.00 0.00 0.00 3.10
986 1085 0.395586 TGCTCTGCCCTCTCTCTCTC 60.396 60.000 0.00 0.00 0.00 3.20
987 1086 0.396139 CTGCTCTGCCCTCTCTCTCT 60.396 60.000 0.00 0.00 0.00 3.10
988 1087 0.395586 TCTGCTCTGCCCTCTCTCTC 60.396 60.000 0.00 0.00 0.00 3.20
989 1088 0.396139 CTCTGCTCTGCCCTCTCTCT 60.396 60.000 0.00 0.00 0.00 3.10
990 1089 2.019897 GCTCTGCTCTGCCCTCTCTC 62.020 65.000 0.00 0.00 0.00 3.20
991 1090 2.059786 GCTCTGCTCTGCCCTCTCT 61.060 63.158 0.00 0.00 0.00 3.10
992 1091 2.500646 GCTCTGCTCTGCCCTCTC 59.499 66.667 0.00 0.00 0.00 3.20
993 1092 3.459965 CGCTCTGCTCTGCCCTCT 61.460 66.667 0.00 0.00 0.00 3.69
994 1093 4.527583 CCGCTCTGCTCTGCCCTC 62.528 72.222 0.00 0.00 0.00 4.30
995 1094 2.936160 TATCCGCTCTGCTCTGCCCT 62.936 60.000 0.00 0.00 0.00 5.19
996 1095 2.433231 CTATCCGCTCTGCTCTGCCC 62.433 65.000 0.00 0.00 0.00 5.36
997 1096 1.006337 CTATCCGCTCTGCTCTGCC 60.006 63.158 0.00 0.00 0.00 4.85
1024 1123 0.467290 CCCTCCCTCTCTCTCTTCGG 60.467 65.000 0.00 0.00 0.00 4.30
1026 1125 1.133482 CCTCCCTCCCTCTCTCTCTTC 60.133 61.905 0.00 0.00 0.00 2.87
1038 1137 1.457455 CAGCTCTCCTCCTCCCTCC 60.457 68.421 0.00 0.00 0.00 4.30
1298 1409 8.934973 ATTCTCAGAAACGAAAACGAAAATAG 57.065 30.769 0.00 0.00 0.00 1.73
1412 1537 7.822334 TGTTTGACTCTTCTAGTGTTTGAAGAA 59.178 33.333 6.83 0.00 45.16 2.52
1413 1538 7.327975 TGTTTGACTCTTCTAGTGTTTGAAGA 58.672 34.615 0.00 0.00 44.15 2.87
1414 1539 7.539712 TGTTTGACTCTTCTAGTGTTTGAAG 57.460 36.000 0.00 0.00 39.07 3.02
1507 1641 4.948847 ACTGGTCTTTTGGAATTTTGCTC 58.051 39.130 0.00 0.00 0.00 4.26
1608 1845 3.387699 TGAATGTCGCCTTCAGATGGATA 59.612 43.478 6.53 0.00 0.00 2.59
1650 1887 2.762006 GATCTCGGCCAGGATCTGCG 62.762 65.000 21.02 0.00 36.41 5.18
1900 2137 2.360852 GTCGACCCGAGGACCTGA 60.361 66.667 3.51 0.00 36.23 3.86
2407 3437 8.237811 AGGGCAAATTATCGATTAATTGTTCT 57.762 30.769 1.71 3.79 39.15 3.01
2423 3454 6.595326 GCAAATAGCTTTCTTTAGGGCAAATT 59.405 34.615 0.00 0.00 41.15 1.82
2513 3910 3.352338 CTGGTGGGAGTACGACGCC 62.352 68.421 9.29 9.29 37.34 5.68
2514 3911 1.664321 ATCTGGTGGGAGTACGACGC 61.664 60.000 0.00 3.95 0.00 5.19
2515 3912 0.100682 CATCTGGTGGGAGTACGACG 59.899 60.000 0.00 0.00 0.00 5.12
2516 3913 1.135083 CACATCTGGTGGGAGTACGAC 60.135 57.143 0.00 0.00 44.04 4.34
2517 3914 1.182667 CACATCTGGTGGGAGTACGA 58.817 55.000 0.00 0.00 44.04 3.43
2518 3915 1.757118 ATCACATCTGGTGGGAGTACG 59.243 52.381 0.00 0.00 45.13 3.67
2519 3916 2.743183 GCATCACATCTGGTGGGAGTAC 60.743 54.545 0.00 0.00 45.13 2.73
2520 3917 1.486310 GCATCACATCTGGTGGGAGTA 59.514 52.381 0.00 0.00 45.13 2.59
2521 3918 0.254178 GCATCACATCTGGTGGGAGT 59.746 55.000 0.00 0.00 45.13 3.85
2522 3919 0.465097 GGCATCACATCTGGTGGGAG 60.465 60.000 0.00 0.00 45.13 4.30
2527 3924 0.627451 ACATGGGCATCACATCTGGT 59.373 50.000 0.00 0.00 0.00 4.00
2528 3925 1.029681 CACATGGGCATCACATCTGG 58.970 55.000 0.00 0.00 0.00 3.86
2529 3926 1.029681 CCACATGGGCATCACATCTG 58.970 55.000 0.00 0.00 0.00 2.90
2530 3927 3.507675 CCACATGGGCATCACATCT 57.492 52.632 0.00 0.00 0.00 2.90
2540 3937 0.251916 TAAGTTCTCCGCCACATGGG 59.748 55.000 0.00 0.00 40.85 4.00
2541 3938 1.207089 TCTAAGTTCTCCGCCACATGG 59.793 52.381 0.00 0.00 38.53 3.66
2542 3939 2.672961 TCTAAGTTCTCCGCCACATG 57.327 50.000 0.00 0.00 0.00 3.21
2543 3940 2.158900 CCATCTAAGTTCTCCGCCACAT 60.159 50.000 0.00 0.00 0.00 3.21
2544 3941 1.207089 CCATCTAAGTTCTCCGCCACA 59.793 52.381 0.00 0.00 0.00 4.17
2564 3987 4.423732 AGTTTCAGTGTTGTTTGACATGC 58.576 39.130 0.00 0.00 0.00 4.06
2639 4115 3.690422 TGCACGCAAAACTCACTAAAAG 58.310 40.909 0.00 0.00 0.00 2.27
2656 4133 1.535028 TGTGAATCACGGTGATTGCAC 59.465 47.619 34.09 32.79 46.20 4.57
2740 4247 7.169308 ACATTGCTAGTATTTCGAATAGTTCCG 59.831 37.037 0.00 0.00 0.00 4.30
2755 4263 8.755028 TCTAATTGTACTTCCACATTGCTAGTA 58.245 33.333 0.00 0.00 0.00 1.82
2756 4264 7.620880 TCTAATTGTACTTCCACATTGCTAGT 58.379 34.615 0.00 0.00 0.00 2.57
2757 4265 7.254590 GCTCTAATTGTACTTCCACATTGCTAG 60.255 40.741 0.00 0.00 0.00 3.42
2783 4291 6.183360 TGGCTATGTAATGCAACTTGAAGATG 60.183 38.462 0.00 0.00 0.00 2.90
2789 4297 5.503662 TCATGGCTATGTAATGCAACTTG 57.496 39.130 10.12 0.00 35.73 3.16
2810 4318 9.859427 TGATTTTCTGATTCCACATTGTAATTC 57.141 29.630 0.00 0.00 0.00 2.17
2991 4844 0.897863 TTGTTAGGCCATGTGGGTGC 60.898 55.000 5.01 0.00 39.65 5.01
3210 6139 8.088365 GCCCTTAGCTGATTTTAGAAAGAAAAA 58.912 33.333 0.00 0.00 38.99 1.94
3211 6140 7.602753 GCCCTTAGCTGATTTTAGAAAGAAAA 58.397 34.615 0.00 0.00 38.99 2.29
3212 6141 7.158099 GCCCTTAGCTGATTTTAGAAAGAAA 57.842 36.000 0.00 0.00 38.99 2.52
3213 6142 6.759497 GCCCTTAGCTGATTTTAGAAAGAA 57.241 37.500 0.00 0.00 38.99 2.52
3574 6550 2.289694 GCTAACAGGCCCGATGATGTAT 60.290 50.000 0.00 0.00 0.00 2.29
3729 6706 5.003804 ACATTTCATCAACACTCACTACCC 58.996 41.667 0.00 0.00 0.00 3.69
3766 6748 4.380023 GCCAATAAATTTACAGTGCGGTCA 60.380 41.667 0.00 0.00 0.00 4.02
3865 6850 2.918131 GCGTGACCATTGCTTTCTTGAC 60.918 50.000 0.00 0.00 0.00 3.18
3866 6851 1.266718 GCGTGACCATTGCTTTCTTGA 59.733 47.619 0.00 0.00 0.00 3.02
3867 6852 1.666888 GGCGTGACCATTGCTTTCTTG 60.667 52.381 0.00 0.00 38.86 3.02
3868 6853 0.598065 GGCGTGACCATTGCTTTCTT 59.402 50.000 0.00 0.00 38.86 2.52
3869 6854 0.250901 AGGCGTGACCATTGCTTTCT 60.251 50.000 0.00 0.00 43.14 2.52
3870 6855 0.109597 CAGGCGTGACCATTGCTTTC 60.110 55.000 0.00 0.00 43.14 2.62
3871 6856 0.823356 ACAGGCGTGACCATTGCTTT 60.823 50.000 14.38 0.00 43.14 3.51
3878 6863 1.346395 AGTCAATTACAGGCGTGACCA 59.654 47.619 14.38 0.00 41.05 4.02
3888 6873 8.962679 ACCTAAAAGAAACACAAGTCAATTACA 58.037 29.630 0.00 0.00 0.00 2.41
3889 6874 9.797556 AACCTAAAAGAAACACAAGTCAATTAC 57.202 29.630 0.00 0.00 0.00 1.89
3891 6876 9.719355 AAAACCTAAAAGAAACACAAGTCAATT 57.281 25.926 0.00 0.00 0.00 2.32
3931 6942 2.358267 CGACTAATGCCGGTAGTTCTCT 59.642 50.000 1.90 0.00 31.88 3.10
4002 7013 3.795150 GCACTAGAGAGGAGATGAAAGCG 60.795 52.174 0.00 0.00 0.00 4.68
4003 7014 3.384467 AGCACTAGAGAGGAGATGAAAGC 59.616 47.826 0.00 0.00 0.00 3.51
4011 7022 1.021202 CCGTGAGCACTAGAGAGGAG 58.979 60.000 0.00 0.00 0.00 3.69
4020 7031 1.207329 GTAAGGGAATCCGTGAGCACT 59.793 52.381 0.00 0.00 38.33 4.40
4028 7039 4.404715 TCTTTACTCCAGTAAGGGAATCCG 59.595 45.833 8.33 0.00 41.03 4.18
4029 7040 5.661759 TCTCTTTACTCCAGTAAGGGAATCC 59.338 44.000 8.33 0.00 41.03 3.01
4032 7043 5.399991 TGTCTCTTTACTCCAGTAAGGGAA 58.600 41.667 8.33 0.00 41.03 3.97
4053 7066 9.630098 GTCAACATATCATTCTTGACAAATTGT 57.370 29.630 0.00 0.00 41.38 2.71
4054 7067 9.850628 AGTCAACATATCATTCTTGACAAATTG 57.149 29.630 10.97 0.00 43.28 2.32
4056 7069 9.850628 CAAGTCAACATATCATTCTTGACAAAT 57.149 29.630 10.97 0.00 43.28 2.32
4057 7070 9.065798 TCAAGTCAACATATCATTCTTGACAAA 57.934 29.630 10.97 0.00 43.28 2.83
4058 7071 8.620116 TCAAGTCAACATATCATTCTTGACAA 57.380 30.769 10.97 0.00 43.28 3.18
4059 7072 8.096414 TCTCAAGTCAACATATCATTCTTGACA 58.904 33.333 10.97 0.00 43.28 3.58
4060 7073 8.386606 GTCTCAAGTCAACATATCATTCTTGAC 58.613 37.037 0.00 0.00 41.85 3.18
4061 7074 7.550551 GGTCTCAAGTCAACATATCATTCTTGA 59.449 37.037 0.00 0.00 37.86 3.02
4062 7075 7.201679 GGGTCTCAAGTCAACATATCATTCTTG 60.202 40.741 0.00 0.00 34.19 3.02
4063 7076 6.825721 GGGTCTCAAGTCAACATATCATTCTT 59.174 38.462 0.00 0.00 0.00 2.52
4064 7077 6.352516 GGGTCTCAAGTCAACATATCATTCT 58.647 40.000 0.00 0.00 0.00 2.40
4065 7078 5.235186 CGGGTCTCAAGTCAACATATCATTC 59.765 44.000 0.00 0.00 0.00 2.67
4066 7079 5.104941 TCGGGTCTCAAGTCAACATATCATT 60.105 40.000 0.00 0.00 0.00 2.57
4067 7080 4.405680 TCGGGTCTCAAGTCAACATATCAT 59.594 41.667 0.00 0.00 0.00 2.45
4068 7081 3.767131 TCGGGTCTCAAGTCAACATATCA 59.233 43.478 0.00 0.00 0.00 2.15
4069 7082 4.113354 GTCGGGTCTCAAGTCAACATATC 58.887 47.826 0.00 0.00 0.00 1.63
4070 7083 3.513912 TGTCGGGTCTCAAGTCAACATAT 59.486 43.478 0.00 0.00 0.00 1.78
4071 7084 2.894765 TGTCGGGTCTCAAGTCAACATA 59.105 45.455 0.00 0.00 0.00 2.29
4072 7085 1.691976 TGTCGGGTCTCAAGTCAACAT 59.308 47.619 0.00 0.00 0.00 2.71
4073 7086 1.068588 CTGTCGGGTCTCAAGTCAACA 59.931 52.381 0.00 0.00 0.00 3.33
4074 7087 1.068741 ACTGTCGGGTCTCAAGTCAAC 59.931 52.381 0.00 0.00 0.00 3.18
4075 7088 1.410004 ACTGTCGGGTCTCAAGTCAA 58.590 50.000 0.00 0.00 0.00 3.18
4076 7089 2.281539 TACTGTCGGGTCTCAAGTCA 57.718 50.000 0.00 0.00 0.00 3.41
4077 7090 2.735762 GCATACTGTCGGGTCTCAAGTC 60.736 54.545 0.00 0.00 0.00 3.01
4078 7091 1.204941 GCATACTGTCGGGTCTCAAGT 59.795 52.381 0.00 0.00 0.00 3.16
4079 7092 1.204704 TGCATACTGTCGGGTCTCAAG 59.795 52.381 0.00 0.00 0.00 3.02
4080 7093 1.204704 CTGCATACTGTCGGGTCTCAA 59.795 52.381 0.00 0.00 0.00 3.02
4081 7094 0.817654 CTGCATACTGTCGGGTCTCA 59.182 55.000 0.00 0.00 0.00 3.27
4082 7095 1.103803 TCTGCATACTGTCGGGTCTC 58.896 55.000 0.00 0.00 0.00 3.36
4083 7096 0.818296 GTCTGCATACTGTCGGGTCT 59.182 55.000 0.00 0.00 0.00 3.85
4084 7097 0.818296 AGTCTGCATACTGTCGGGTC 59.182 55.000 3.60 0.00 0.00 4.46
4085 7098 2.139323 TAGTCTGCATACTGTCGGGT 57.861 50.000 14.57 0.00 0.00 5.28
4086 7099 2.623416 TGATAGTCTGCATACTGTCGGG 59.377 50.000 19.37 0.00 39.67 5.14
4087 7100 3.990318 TGATAGTCTGCATACTGTCGG 57.010 47.619 19.37 0.00 39.67 4.79
4088 7101 5.570973 GCTATTGATAGTCTGCATACTGTCG 59.429 44.000 19.37 9.64 39.67 4.35
4089 7102 6.450545 TGCTATTGATAGTCTGCATACTGTC 58.549 40.000 18.35 18.35 37.92 3.51
4090 7103 6.410942 TGCTATTGATAGTCTGCATACTGT 57.589 37.500 14.57 8.09 32.96 3.55
4091 7104 7.719778 TTTGCTATTGATAGTCTGCATACTG 57.280 36.000 14.57 0.00 32.96 2.74
4092 7105 8.737168 TTTTTGCTATTGATAGTCTGCATACT 57.263 30.769 9.90 9.90 32.96 2.12
4115 7128 6.869388 ACGTATTTGTCAACCACTTTGTTTTT 59.131 30.769 0.00 0.00 36.49 1.94
4116 7129 6.391537 ACGTATTTGTCAACCACTTTGTTTT 58.608 32.000 0.00 0.00 36.49 2.43
4117 7130 5.956642 ACGTATTTGTCAACCACTTTGTTT 58.043 33.333 0.00 0.00 36.49 2.83
4118 7131 5.570234 ACGTATTTGTCAACCACTTTGTT 57.430 34.783 0.00 0.00 36.49 2.83
4119 7132 6.050432 TCTACGTATTTGTCAACCACTTTGT 58.950 36.000 0.00 0.00 36.49 2.83
4120 7133 6.202188 ACTCTACGTATTTGTCAACCACTTTG 59.798 38.462 0.00 0.00 36.42 2.77
4121 7134 6.202188 CACTCTACGTATTTGTCAACCACTTT 59.798 38.462 0.00 0.00 0.00 2.66
4122 7135 5.694910 CACTCTACGTATTTGTCAACCACTT 59.305 40.000 0.00 0.00 0.00 3.16
4123 7136 5.227908 CACTCTACGTATTTGTCAACCACT 58.772 41.667 0.00 0.00 0.00 4.00
4124 7137 4.143179 GCACTCTACGTATTTGTCAACCAC 60.143 45.833 0.00 0.00 0.00 4.16
4125 7138 3.991773 GCACTCTACGTATTTGTCAACCA 59.008 43.478 0.00 0.00 0.00 3.67
4126 7139 3.991773 TGCACTCTACGTATTTGTCAACC 59.008 43.478 0.00 0.00 0.00 3.77
4127 7140 5.577164 AGATGCACTCTACGTATTTGTCAAC 59.423 40.000 0.00 0.00 30.26 3.18
4128 7141 5.720202 AGATGCACTCTACGTATTTGTCAA 58.280 37.500 0.00 0.00 30.26 3.18
4129 7142 5.324784 AGATGCACTCTACGTATTTGTCA 57.675 39.130 0.00 0.00 30.26 3.58
4130 7143 5.874892 GAGATGCACTCTACGTATTTGTC 57.125 43.478 0.00 0.00 41.94 3.18
4163 7176 9.759473 AGATCAAGATATTTCCCTCAAAAAGAA 57.241 29.630 0.00 0.00 0.00 2.52
4164 7177 9.759473 AAGATCAAGATATTTCCCTCAAAAAGA 57.241 29.630 0.00 0.00 0.00 2.52
4165 7178 9.798994 CAAGATCAAGATATTTCCCTCAAAAAG 57.201 33.333 0.00 0.00 0.00 2.27
4166 7179 9.312904 ACAAGATCAAGATATTTCCCTCAAAAA 57.687 29.630 0.00 0.00 0.00 1.94
4167 7180 8.884124 ACAAGATCAAGATATTTCCCTCAAAA 57.116 30.769 0.00 0.00 0.00 2.44
4168 7181 8.742777 CAACAAGATCAAGATATTTCCCTCAAA 58.257 33.333 0.00 0.00 0.00 2.69
4169 7182 8.108999 TCAACAAGATCAAGATATTTCCCTCAA 58.891 33.333 0.00 0.00 0.00 3.02
4170 7183 7.632861 TCAACAAGATCAAGATATTTCCCTCA 58.367 34.615 0.00 0.00 0.00 3.86
4171 7184 8.401709 GTTCAACAAGATCAAGATATTTCCCTC 58.598 37.037 0.00 0.00 0.00 4.30
4172 7185 7.890127 TGTTCAACAAGATCAAGATATTTCCCT 59.110 33.333 0.00 0.00 0.00 4.20
4173 7186 8.055279 TGTTCAACAAGATCAAGATATTTCCC 57.945 34.615 0.00 0.00 0.00 3.97
4174 7187 7.699812 GCTGTTCAACAAGATCAAGATATTTCC 59.300 37.037 0.00 0.00 0.00 3.13
4175 7188 8.239314 TGCTGTTCAACAAGATCAAGATATTTC 58.761 33.333 0.00 0.00 0.00 2.17
4176 7189 8.114331 TGCTGTTCAACAAGATCAAGATATTT 57.886 30.769 0.00 0.00 0.00 1.40
4177 7190 7.692460 TGCTGTTCAACAAGATCAAGATATT 57.308 32.000 0.00 0.00 0.00 1.28
4178 7191 7.609146 TCTTGCTGTTCAACAAGATCAAGATAT 59.391 33.333 12.64 0.00 45.48 1.63
4179 7192 6.936335 TCTTGCTGTTCAACAAGATCAAGATA 59.064 34.615 12.64 1.96 45.48 1.98
4180 7193 5.766670 TCTTGCTGTTCAACAAGATCAAGAT 59.233 36.000 12.64 0.00 45.48 2.40
4181 7194 5.125356 TCTTGCTGTTCAACAAGATCAAGA 58.875 37.500 12.64 14.90 45.48 3.02
4182 7195 5.428496 TCTTGCTGTTCAACAAGATCAAG 57.572 39.130 12.64 12.01 45.48 3.02
4203 7216 7.362574 GGAATGACTAGAGGTGATACATAGCTC 60.363 44.444 0.00 0.00 41.66 4.09
4204 7217 6.435904 GGAATGACTAGAGGTGATACATAGCT 59.564 42.308 0.00 0.00 0.00 3.32
4205 7218 6.435904 AGGAATGACTAGAGGTGATACATAGC 59.564 42.308 0.00 0.00 0.00 2.97
4206 7219 9.521841 TTAGGAATGACTAGAGGTGATACATAG 57.478 37.037 0.00 0.00 0.00 2.23
4208 7221 8.964533 ATTAGGAATGACTAGAGGTGATACAT 57.035 34.615 0.00 0.00 0.00 2.29
4209 7222 9.298250 GTATTAGGAATGACTAGAGGTGATACA 57.702 37.037 0.00 0.00 0.00 2.29
4210 7223 8.452534 CGTATTAGGAATGACTAGAGGTGATAC 58.547 40.741 0.00 0.00 0.00 2.24
4211 7224 8.162085 ACGTATTAGGAATGACTAGAGGTGATA 58.838 37.037 0.00 0.00 0.00 2.15
4212 7225 7.005296 ACGTATTAGGAATGACTAGAGGTGAT 58.995 38.462 0.00 0.00 0.00 3.06
4213 7226 6.363065 ACGTATTAGGAATGACTAGAGGTGA 58.637 40.000 0.00 0.00 0.00 4.02
4214 7227 6.487331 AGACGTATTAGGAATGACTAGAGGTG 59.513 42.308 0.00 0.00 0.00 4.00
4215 7228 6.603224 AGACGTATTAGGAATGACTAGAGGT 58.397 40.000 0.00 0.00 0.00 3.85
4216 7229 7.513371 AAGACGTATTAGGAATGACTAGAGG 57.487 40.000 0.00 0.00 0.00 3.69
4217 7230 9.804758 AAAAAGACGTATTAGGAATGACTAGAG 57.195 33.333 0.00 0.00 0.00 2.43
4243 7256 9.941664 CGAGACGTATTAGGAATAGTTCTAAAA 57.058 33.333 0.00 0.00 0.00 1.52
4244 7257 8.072567 GCGAGACGTATTAGGAATAGTTCTAAA 58.927 37.037 0.00 0.00 0.00 1.85
4245 7258 7.308229 GGCGAGACGTATTAGGAATAGTTCTAA 60.308 40.741 0.00 0.00 0.00 2.10
4246 7259 6.148480 GGCGAGACGTATTAGGAATAGTTCTA 59.852 42.308 0.00 0.00 0.00 2.10
4247 7260 5.048852 GGCGAGACGTATTAGGAATAGTTCT 60.049 44.000 0.00 0.00 0.00 3.01
4248 7261 5.048852 AGGCGAGACGTATTAGGAATAGTTC 60.049 44.000 0.00 0.00 0.00 3.01
4249 7262 4.826183 AGGCGAGACGTATTAGGAATAGTT 59.174 41.667 0.00 0.00 0.00 2.24
4250 7263 4.396522 AGGCGAGACGTATTAGGAATAGT 58.603 43.478 0.00 0.00 0.00 2.12
4251 7264 5.410746 TGTAGGCGAGACGTATTAGGAATAG 59.589 44.000 0.00 0.00 0.00 1.73
4252 7265 5.308014 TGTAGGCGAGACGTATTAGGAATA 58.692 41.667 0.00 0.00 0.00 1.75
4253 7266 4.139786 TGTAGGCGAGACGTATTAGGAAT 58.860 43.478 0.00 0.00 0.00 3.01
4254 7267 3.544684 TGTAGGCGAGACGTATTAGGAA 58.455 45.455 0.00 0.00 0.00 3.36
4255 7268 3.136763 CTGTAGGCGAGACGTATTAGGA 58.863 50.000 0.00 0.00 0.00 2.94
4256 7269 2.350580 GCTGTAGGCGAGACGTATTAGG 60.351 54.545 0.00 0.00 0.00 2.69
4257 7270 2.289820 TGCTGTAGGCGAGACGTATTAG 59.710 50.000 0.00 0.00 45.43 1.73
4258 7271 2.291365 TGCTGTAGGCGAGACGTATTA 58.709 47.619 0.00 0.00 45.43 0.98
4259 7272 1.100510 TGCTGTAGGCGAGACGTATT 58.899 50.000 0.00 0.00 45.43 1.89
4260 7273 1.100510 TTGCTGTAGGCGAGACGTAT 58.899 50.000 0.00 0.00 45.43 3.06
4261 7274 2.558617 TTGCTGTAGGCGAGACGTA 58.441 52.632 0.00 0.00 45.43 3.57
4262 7275 3.362262 TTGCTGTAGGCGAGACGT 58.638 55.556 0.00 0.00 45.43 4.34
4270 7283 1.670811 CCAATAACGCCTTGCTGTAGG 59.329 52.381 0.00 0.00 38.40 3.18
4271 7284 1.064060 GCCAATAACGCCTTGCTGTAG 59.936 52.381 0.00 0.00 0.00 2.74
4272 7285 1.091537 GCCAATAACGCCTTGCTGTA 58.908 50.000 0.00 0.00 0.00 2.74
4273 7286 1.595093 GGCCAATAACGCCTTGCTGT 61.595 55.000 0.00 0.00 43.48 4.40
4274 7287 1.139520 GGCCAATAACGCCTTGCTG 59.860 57.895 0.00 0.00 43.48 4.41
4275 7288 2.052104 GGGCCAATAACGCCTTGCT 61.052 57.895 4.39 0.00 46.24 3.91
4276 7289 2.494445 GGGCCAATAACGCCTTGC 59.506 61.111 4.39 0.00 46.24 4.01
4277 7290 2.770589 CCGGGCCAATAACGCCTTG 61.771 63.158 4.39 0.00 46.24 3.61
4278 7291 2.439519 CCGGGCCAATAACGCCTT 60.440 61.111 4.39 0.00 46.24 4.35
4294 7307 0.253894 AGTGGTTACGGTATTGGGCC 59.746 55.000 0.00 0.00 0.00 5.80
4295 7308 1.660167 GAGTGGTTACGGTATTGGGC 58.340 55.000 0.00 0.00 0.00 5.36
4296 7309 1.134310 GGGAGTGGTTACGGTATTGGG 60.134 57.143 0.00 0.00 0.00 4.12
4297 7310 1.555992 TGGGAGTGGTTACGGTATTGG 59.444 52.381 0.00 0.00 0.00 3.16
4298 7311 3.267483 CTTGGGAGTGGTTACGGTATTG 58.733 50.000 0.00 0.00 0.00 1.90
4299 7312 2.237893 CCTTGGGAGTGGTTACGGTATT 59.762 50.000 0.00 0.00 0.00 1.89
4300 7313 1.835531 CCTTGGGAGTGGTTACGGTAT 59.164 52.381 0.00 0.00 0.00 2.73
4301 7314 1.269012 CCTTGGGAGTGGTTACGGTA 58.731 55.000 0.00 0.00 0.00 4.02
4302 7315 0.765519 ACCTTGGGAGTGGTTACGGT 60.766 55.000 0.00 0.00 31.62 4.83
4303 7316 0.036671 GACCTTGGGAGTGGTTACGG 60.037 60.000 0.00 0.00 36.59 4.02
4304 7317 0.682852 TGACCTTGGGAGTGGTTACG 59.317 55.000 0.00 0.00 36.59 3.18
4305 7318 3.434940 AATGACCTTGGGAGTGGTTAC 57.565 47.619 0.00 0.00 36.59 2.50
4306 7319 5.251932 TCATAAATGACCTTGGGAGTGGTTA 59.748 40.000 0.00 0.00 36.59 2.85
4307 7320 4.044065 TCATAAATGACCTTGGGAGTGGTT 59.956 41.667 0.00 0.00 36.59 3.67
4308 7321 3.591527 TCATAAATGACCTTGGGAGTGGT 59.408 43.478 0.00 0.00 39.60 4.16
4309 7322 4.235079 TCATAAATGACCTTGGGAGTGG 57.765 45.455 0.00 0.00 0.00 4.00
4324 7337 9.804758 ACAAAAATGGTAAAAGAACGTCATAAA 57.195 25.926 0.00 0.00 0.00 1.40
4325 7338 9.453325 GACAAAAATGGTAAAAGAACGTCATAA 57.547 29.630 0.00 0.00 0.00 1.90
4326 7339 8.622157 TGACAAAAATGGTAAAAGAACGTCATA 58.378 29.630 0.00 0.00 0.00 2.15
4327 7340 7.434013 GTGACAAAAATGGTAAAAGAACGTCAT 59.566 33.333 0.00 0.00 31.87 3.06
4328 7341 6.748198 GTGACAAAAATGGTAAAAGAACGTCA 59.252 34.615 0.00 0.00 0.00 4.35
4329 7342 6.970613 AGTGACAAAAATGGTAAAAGAACGTC 59.029 34.615 0.00 0.00 0.00 4.34
4330 7343 6.750039 CAGTGACAAAAATGGTAAAAGAACGT 59.250 34.615 0.00 0.00 0.00 3.99
4331 7344 6.750039 ACAGTGACAAAAATGGTAAAAGAACG 59.250 34.615 0.00 0.00 0.00 3.95
4332 7345 8.474006 AACAGTGACAAAAATGGTAAAAGAAC 57.526 30.769 0.00 0.00 0.00 3.01
4333 7346 9.495572 AAAACAGTGACAAAAATGGTAAAAGAA 57.504 25.926 0.00 0.00 0.00 2.52
4334 7347 8.930760 CAAAACAGTGACAAAAATGGTAAAAGA 58.069 29.630 0.00 0.00 0.00 2.52
4335 7348 7.691877 GCAAAACAGTGACAAAAATGGTAAAAG 59.308 33.333 0.00 0.00 0.00 2.27
4336 7349 7.173218 TGCAAAACAGTGACAAAAATGGTAAAA 59.827 29.630 0.00 0.00 0.00 1.52
4337 7350 6.650807 TGCAAAACAGTGACAAAAATGGTAAA 59.349 30.769 0.00 0.00 0.00 2.01
4338 7351 6.166279 TGCAAAACAGTGACAAAAATGGTAA 58.834 32.000 0.00 0.00 0.00 2.85
4339 7352 5.724328 TGCAAAACAGTGACAAAAATGGTA 58.276 33.333 0.00 0.00 0.00 3.25
4340 7353 4.573900 TGCAAAACAGTGACAAAAATGGT 58.426 34.783 0.00 0.00 0.00 3.55
4341 7354 5.293814 TGATGCAAAACAGTGACAAAAATGG 59.706 36.000 0.00 0.00 0.00 3.16
4342 7355 6.036300 ACTGATGCAAAACAGTGACAAAAATG 59.964 34.615 18.80 0.00 44.18 2.32
4343 7356 6.108015 ACTGATGCAAAACAGTGACAAAAAT 58.892 32.000 18.80 0.00 44.18 1.82
4344 7357 5.477510 ACTGATGCAAAACAGTGACAAAAA 58.522 33.333 18.80 0.00 44.18 1.94
4345 7358 5.070770 ACTGATGCAAAACAGTGACAAAA 57.929 34.783 18.80 0.00 44.18 2.44
4346 7359 4.717233 ACTGATGCAAAACAGTGACAAA 57.283 36.364 18.80 0.00 44.18 2.83
4347 7360 4.717233 AACTGATGCAAAACAGTGACAA 57.283 36.364 19.73 0.00 44.94 3.18
4348 7361 4.717233 AAACTGATGCAAAACAGTGACA 57.283 36.364 19.73 0.00 44.94 3.58
4349 7362 5.343249 AGAAAACTGATGCAAAACAGTGAC 58.657 37.500 19.73 14.89 44.94 3.67
4350 7363 5.581126 AGAAAACTGATGCAAAACAGTGA 57.419 34.783 19.73 0.00 44.94 3.41
4351 7364 6.091169 ACAAAGAAAACTGATGCAAAACAGTG 59.909 34.615 19.73 11.19 44.94 3.66
4353 7366 6.651755 ACAAAGAAAACTGATGCAAAACAG 57.348 33.333 14.38 14.38 39.65 3.16
4354 7367 7.432350 AAACAAAGAAAACTGATGCAAAACA 57.568 28.000 0.00 0.00 0.00 2.83
4355 7368 8.726650 AAAAACAAAGAAAACTGATGCAAAAC 57.273 26.923 0.00 0.00 0.00 2.43
4379 7392 9.567776 AAGAAAACCCAAAGAAAGAAAGAAAAA 57.432 25.926 0.00 0.00 0.00 1.94
4392 7405 9.816354 TGAGAAAAGAAATAAGAAAACCCAAAG 57.184 29.630 0.00 0.00 0.00 2.77
4395 7408 9.594478 GTTTGAGAAAAGAAATAAGAAAACCCA 57.406 29.630 0.00 0.00 0.00 4.51
4396 7409 9.594478 TGTTTGAGAAAAGAAATAAGAAAACCC 57.406 29.630 0.00 0.00 0.00 4.11
4614 7627 9.979578 AGTCAAAGCATATGTTTGAAAAATGTA 57.020 25.926 23.24 7.30 43.68 2.29
4615 7628 8.891671 AGTCAAAGCATATGTTTGAAAAATGT 57.108 26.923 23.24 10.21 43.68 2.71
4779 7792 9.584839 GCATTAAAAGAATTGTTCACATGTTTC 57.415 29.630 0.00 0.00 0.00 2.78
4780 7793 9.107177 TGCATTAAAAGAATTGTTCACATGTTT 57.893 25.926 0.00 0.00 0.00 2.83
4781 7794 8.550376 GTGCATTAAAAGAATTGTTCACATGTT 58.450 29.630 0.00 0.00 0.00 2.71
4782 7795 7.927629 AGTGCATTAAAAGAATTGTTCACATGT 59.072 29.630 0.00 0.00 0.00 3.21
4783 7796 8.301730 AGTGCATTAAAAGAATTGTTCACATG 57.698 30.769 0.00 0.00 0.00 3.21
4784 7797 8.362639 AGAGTGCATTAAAAGAATTGTTCACAT 58.637 29.630 0.00 0.00 0.00 3.21
4785 7798 7.715657 AGAGTGCATTAAAAGAATTGTTCACA 58.284 30.769 0.00 0.00 0.00 3.58
4786 7799 9.118236 GTAGAGTGCATTAAAAGAATTGTTCAC 57.882 33.333 0.00 0.00 0.00 3.18
4787 7800 8.845227 TGTAGAGTGCATTAAAAGAATTGTTCA 58.155 29.630 0.00 0.00 0.00 3.18
4788 7801 9.846248 ATGTAGAGTGCATTAAAAGAATTGTTC 57.154 29.630 0.00 0.00 0.00 3.18
4798 7811 9.809096 TCAAAAACAAATGTAGAGTGCATTAAA 57.191 25.926 0.00 0.00 35.73 1.52
4799 7812 9.809096 TTCAAAAACAAATGTAGAGTGCATTAA 57.191 25.926 0.00 0.00 35.73 1.40
4800 7813 9.979578 ATTCAAAAACAAATGTAGAGTGCATTA 57.020 25.926 0.00 0.00 35.73 1.90
4801 7814 8.891671 ATTCAAAAACAAATGTAGAGTGCATT 57.108 26.923 0.00 0.00 38.09 3.56
4802 7815 8.767085 CAATTCAAAAACAAATGTAGAGTGCAT 58.233 29.630 0.00 0.00 0.00 3.96
4803 7816 7.763528 ACAATTCAAAAACAAATGTAGAGTGCA 59.236 29.630 0.00 0.00 0.00 4.57
4804 7817 8.130307 ACAATTCAAAAACAAATGTAGAGTGC 57.870 30.769 0.00 0.00 0.00 4.40
4867 7880 9.472361 ACATCTACGTAGCGTTTTATATTGAAT 57.528 29.630 18.00 0.00 41.54 2.57
4868 7881 8.861033 ACATCTACGTAGCGTTTTATATTGAA 57.139 30.769 18.00 0.00 41.54 2.69
4869 7882 8.861033 AACATCTACGTAGCGTTTTATATTGA 57.139 30.769 18.00 0.00 41.54 2.57
4870 7883 9.564041 GAAACATCTACGTAGCGTTTTATATTG 57.436 33.333 28.41 13.40 41.54 1.90
4871 7884 9.525409 AGAAACATCTACGTAGCGTTTTATATT 57.475 29.630 28.41 15.46 41.54 1.28
4872 7885 8.965172 CAGAAACATCTACGTAGCGTTTTATAT 58.035 33.333 28.41 18.58 41.54 0.86
4873 7886 8.183536 TCAGAAACATCTACGTAGCGTTTTATA 58.816 33.333 28.41 19.40 41.54 0.98
4874 7887 7.031372 TCAGAAACATCTACGTAGCGTTTTAT 58.969 34.615 28.41 21.67 41.54 1.40
4875 7888 6.380995 TCAGAAACATCTACGTAGCGTTTTA 58.619 36.000 28.41 19.84 41.54 1.52
4876 7889 5.224888 TCAGAAACATCTACGTAGCGTTTT 58.775 37.500 28.41 21.03 41.54 2.43
4877 7890 4.801891 TCAGAAACATCTACGTAGCGTTT 58.198 39.130 28.27 28.27 41.54 3.60
4878 7891 4.430137 TCAGAAACATCTACGTAGCGTT 57.570 40.909 18.00 18.49 41.54 4.84
4879 7892 4.430137 TTCAGAAACATCTACGTAGCGT 57.570 40.909 18.00 13.83 44.35 5.07
4880 7893 5.515270 TCATTTCAGAAACATCTACGTAGCG 59.485 40.000 18.00 13.20 0.00 4.26
4881 7894 6.531948 ACTCATTTCAGAAACATCTACGTAGC 59.468 38.462 18.00 2.66 0.00 3.58
4882 7895 7.755373 TCACTCATTTCAGAAACATCTACGTAG 59.245 37.037 16.73 16.73 0.00 3.51
4883 7896 7.599171 TCACTCATTTCAGAAACATCTACGTA 58.401 34.615 0.00 0.00 0.00 3.57
4884 7897 6.455647 TCACTCATTTCAGAAACATCTACGT 58.544 36.000 0.00 0.00 0.00 3.57
4885 7898 6.951256 TCACTCATTTCAGAAACATCTACG 57.049 37.500 0.00 0.00 0.00 3.51
4886 7899 8.087982 TGTTCACTCATTTCAGAAACATCTAC 57.912 34.615 0.00 0.00 0.00 2.59
4887 7900 8.853077 ATGTTCACTCATTTCAGAAACATCTA 57.147 30.769 0.00 0.00 32.62 1.98
4888 7901 7.756395 ATGTTCACTCATTTCAGAAACATCT 57.244 32.000 0.00 0.00 32.62 2.90
4889 7902 8.807667 AAATGTTCACTCATTTCAGAAACATC 57.192 30.769 0.00 0.00 42.12 3.06
4895 7908 9.950680 GTCTTTTAAATGTTCACTCATTTCAGA 57.049 29.630 7.73 6.34 43.87 3.27
4896 7909 9.734620 TGTCTTTTAAATGTTCACTCATTTCAG 57.265 29.630 7.73 4.60 43.87 3.02
4897 7910 9.515020 GTGTCTTTTAAATGTTCACTCATTTCA 57.485 29.630 7.73 0.00 43.87 2.69
4898 7911 8.682016 CGTGTCTTTTAAATGTTCACTCATTTC 58.318 33.333 18.79 0.00 43.87 2.17
4899 7912 8.402472 TCGTGTCTTTTAAATGTTCACTCATTT 58.598 29.630 18.79 9.12 45.83 2.32
4900 7913 7.925993 TCGTGTCTTTTAAATGTTCACTCATT 58.074 30.769 18.79 0.00 39.35 2.57
4901 7914 7.490962 TCGTGTCTTTTAAATGTTCACTCAT 57.509 32.000 18.79 0.00 0.00 2.90
4902 7915 6.912203 TCGTGTCTTTTAAATGTTCACTCA 57.088 33.333 18.79 10.23 0.00 3.41
4903 7916 6.353582 CGTTCGTGTCTTTTAAATGTTCACTC 59.646 38.462 18.79 12.84 0.00 3.51
4904 7917 6.183360 ACGTTCGTGTCTTTTAAATGTTCACT 60.183 34.615 18.79 7.27 0.00 3.41
4905 7918 5.961263 ACGTTCGTGTCTTTTAAATGTTCAC 59.039 36.000 15.01 15.01 0.00 3.18
4906 7919 6.109320 ACGTTCGTGTCTTTTAAATGTTCA 57.891 33.333 0.00 0.95 0.00 3.18
4907 7920 7.427238 AAACGTTCGTGTCTTTTAAATGTTC 57.573 32.000 0.00 0.00 30.82 3.18
4908 7921 7.800015 AAAACGTTCGTGTCTTTTAAATGTT 57.200 28.000 0.00 0.00 32.09 2.71
4909 7922 7.800015 AAAAACGTTCGTGTCTTTTAAATGT 57.200 28.000 0.00 0.00 0.00 2.71
4931 7944 9.838339 TTAAAATGGGTTGATAGCTTTGAAAAA 57.162 25.926 0.00 0.00 0.00 1.94
4932 7945 9.838339 TTTAAAATGGGTTGATAGCTTTGAAAA 57.162 25.926 0.00 0.00 0.00 2.29
4933 7946 9.838339 TTTTAAAATGGGTTGATAGCTTTGAAA 57.162 25.926 0.00 0.00 0.00 2.69
4934 7947 9.838339 TTTTTAAAATGGGTTGATAGCTTTGAA 57.162 25.926 0.55 0.00 0.00 2.69
4977 7990 8.584157 TGAATTTTAGAAATGGTAATGCAGTGT 58.416 29.630 0.00 0.00 0.00 3.55
4978 7991 8.984891 TGAATTTTAGAAATGGTAATGCAGTG 57.015 30.769 0.00 0.00 0.00 3.66
4979 7992 9.643693 CTTGAATTTTAGAAATGGTAATGCAGT 57.356 29.630 0.00 0.00 0.00 4.40
4980 7993 9.090692 CCTTGAATTTTAGAAATGGTAATGCAG 57.909 33.333 0.00 0.00 0.00 4.41
4981 7994 8.592809 ACCTTGAATTTTAGAAATGGTAATGCA 58.407 29.630 0.00 0.00 0.00 3.96
4982 7995 9.435688 AACCTTGAATTTTAGAAATGGTAATGC 57.564 29.630 0.00 0.00 0.00 3.56
4987 8000 9.898152 TCAAAAACCTTGAATTTTAGAAATGGT 57.102 25.926 0.00 0.00 0.00 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.