Multiple sequence alignment - TraesCS7D01G536300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G536300 chr7D 100.000 4240 0 0 1 4240 628130575 628134814 0.000000e+00 7830.0
1 TraesCS7D01G536300 chr7D 90.966 321 27 2 3921 4240 515487231 515486912 8.420000e-117 431.0
2 TraesCS7D01G536300 chr7D 94.093 237 14 0 1 237 627778706 627778942 1.120000e-95 361.0
3 TraesCS7D01G536300 chr7D 94.093 237 14 0 1 237 627989474 627989710 1.120000e-95 361.0
4 TraesCS7D01G536300 chr7D 94.017 234 14 0 1 234 627895286 627895519 5.210000e-94 355.0
5 TraesCS7D01G536300 chr7D 93.671 237 14 1 1 237 627834434 627834669 1.880000e-93 353.0
6 TraesCS7D01G536300 chr7D 76.040 505 115 5 250 750 386350585 386351087 1.510000e-64 257.0
7 TraesCS7D01G536300 chr7D 72.534 517 117 22 243 750 460528004 460527504 1.230000e-30 145.0
8 TraesCS7D01G536300 chr7B 92.373 3081 172 35 752 3798 730022580 730025631 0.000000e+00 4329.0
9 TraesCS7D01G536300 chr7B 92.000 750 49 6 752 1491 729678718 729679466 0.000000e+00 1042.0
10 TraesCS7D01G536300 chr7B 87.733 750 87 5 1 750 729677923 729678667 0.000000e+00 870.0
11 TraesCS7D01G536300 chr7B 86.370 763 89 9 1 759 730021781 730022532 0.000000e+00 819.0
12 TraesCS7D01G536300 chr7B 92.355 327 24 1 3915 4240 104298324 104298650 8.300000e-127 464.0
13 TraesCS7D01G536300 chr7B 90.741 324 28 2 3917 4240 339619565 339619244 8.420000e-117 431.0
14 TraesCS7D01G536300 chr7B 73.673 490 99 22 272 750 380711260 380710790 3.390000e-36 163.0
15 TraesCS7D01G536300 chr7B 91.489 47 3 1 3774 3820 730025641 730025686 3.540000e-06 63.9
16 TraesCS7D01G536300 chr7A 91.873 3064 191 29 748 3775 723957077 723960118 0.000000e+00 4226.0
17 TraesCS7D01G536300 chr7A 89.071 732 73 5 1 728 723862169 723862897 0.000000e+00 902.0
18 TraesCS7D01G536300 chr7A 84.321 759 101 10 1 751 723956283 723957031 0.000000e+00 726.0
19 TraesCS7D01G536300 chr7A 86.877 602 65 10 833 1422 723915096 723915695 0.000000e+00 662.0
20 TraesCS7D01G536300 chr7A 93.671 237 15 0 1 237 723740051 723740287 5.210000e-94 355.0
21 TraesCS7D01G536300 chrUn 100.000 394 0 0 1988 2381 479428876 479429269 0.000000e+00 728.0
22 TraesCS7D01G536300 chrUn 81.132 106 20 0 250 355 392617285 392617390 7.550000e-13 86.1
23 TraesCS7D01G536300 chr1D 91.358 324 27 1 3917 4240 431764202 431763880 3.890000e-120 442.0
24 TraesCS7D01G536300 chr1D 89.970 329 29 4 3915 4239 463333460 463333132 5.070000e-114 422.0
25 TraesCS7D01G536300 chr1D 76.786 224 46 5 531 751 66380708 66380928 2.070000e-23 121.0
26 TraesCS7D01G536300 chr3D 90.312 320 31 0 3921 4240 562514614 562514295 1.820000e-113 420.0
27 TraesCS7D01G536300 chr3D 90.093 323 31 1 3917 4239 15377720 15377399 6.560000e-113 418.0
28 TraesCS7D01G536300 chr2A 90.343 321 30 1 3921 4240 729830952 729831272 1.820000e-113 420.0
29 TraesCS7D01G536300 chr6D 90.282 319 29 1 3921 4239 253753772 253754088 2.360000e-112 416.0
30 TraesCS7D01G536300 chr4A 74.517 518 109 17 250 749 709619673 709620185 2.000000e-48 204.0
31 TraesCS7D01G536300 chr5D 74.743 487 103 15 270 750 536240085 536239613 2.590000e-47 200.0
32 TraesCS7D01G536300 chr5D 74.434 442 93 14 291 726 382425666 382425239 5.640000e-39 172.0
33 TraesCS7D01G536300 chr3A 75.210 476 88 25 291 750 88526083 88525622 9.300000e-47 198.0
34 TraesCS7D01G536300 chr2D 74.082 490 96 23 272 750 449715611 449715142 5.640000e-39 172.0
35 TraesCS7D01G536300 chr6A 77.959 245 51 3 509 751 374426455 374426212 2.640000e-32 150.0
36 TraesCS7D01G536300 chr4D 92.593 54 4 0 2024 2077 97381287 97381340 1.260000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G536300 chr7D 628130575 628134814 4239 False 7830.0 7830 100.000000 1 4240 1 chr7D.!!$F6 4239
1 TraesCS7D01G536300 chr7D 386350585 386351087 502 False 257.0 257 76.040000 250 750 1 chr7D.!!$F1 500
2 TraesCS7D01G536300 chr7B 730021781 730025686 3905 False 1737.3 4329 90.077333 1 3820 3 chr7B.!!$F3 3819
3 TraesCS7D01G536300 chr7B 729677923 729679466 1543 False 956.0 1042 89.866500 1 1491 2 chr7B.!!$F2 1490
4 TraesCS7D01G536300 chr7A 723956283 723960118 3835 False 2476.0 4226 88.097000 1 3775 2 chr7A.!!$F4 3774
5 TraesCS7D01G536300 chr7A 723862169 723862897 728 False 902.0 902 89.071000 1 728 1 chr7A.!!$F2 727
6 TraesCS7D01G536300 chr7A 723915096 723915695 599 False 662.0 662 86.877000 833 1422 1 chr7A.!!$F3 589
7 TraesCS7D01G536300 chr4A 709619673 709620185 512 False 204.0 204 74.517000 250 749 1 chr4A.!!$F1 499

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
961 1053 0.178992 TCCATCGCCATTTCCATCCC 60.179 55.0 0.0 0.0 0.0 3.85 F
2444 2564 0.533491 CATCCCCAAACCTCGACGTA 59.467 55.0 0.0 0.0 0.0 3.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2711 2831 0.107831 TGGACAGGCTAAACAGCGTT 59.892 50.0 0.0 0.0 35.24 4.84 R
3270 3390 0.038251 TCGAGCTGCGTTCATCAAGT 60.038 50.0 0.0 0.0 41.80 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
143 144 2.340328 GCGGGGCCGATGAAAAGTT 61.340 57.895 0.00 0.00 42.83 2.66
178 179 5.120399 CAACCTAGTCAAAAGGTGTACACA 58.880 41.667 26.51 2.72 46.85 3.72
264 268 1.819288 CCTTGTCTGCCTCGTCTTCTA 59.181 52.381 0.00 0.00 0.00 2.10
269 273 3.701542 TGTCTGCCTCGTCTTCTATGAAT 59.298 43.478 0.00 0.00 0.00 2.57
276 280 5.453480 GCCTCGTCTTCTATGAATTTAGGGT 60.453 44.000 0.00 0.00 0.00 4.34
297 301 3.083997 GGGAGCGTGGTGGATCCT 61.084 66.667 14.23 0.00 42.15 3.24
378 387 1.004394 TGTCCTGCTTAGAGACGAGGA 59.996 52.381 0.00 0.00 33.09 3.71
380 389 1.282447 TCCTGCTTAGAGACGAGGAGT 59.718 52.381 0.00 0.00 30.31 3.85
405 418 5.055812 GGTGGCTCTCTGAAGATGAAATAG 58.944 45.833 0.00 0.00 0.00 1.73
410 423 6.997476 GGCTCTCTGAAGATGAAATAGGATTT 59.003 38.462 0.00 0.00 0.00 2.17
429 442 4.533124 TCCCGCCTAGCATCCCGA 62.533 66.667 0.00 0.00 0.00 5.14
432 445 1.669115 CCGCCTAGCATCCCGATTG 60.669 63.158 0.00 0.00 0.00 2.67
471 484 0.534203 TTGGAGGGCGTGTGAAAGTC 60.534 55.000 0.00 0.00 0.00 3.01
496 510 2.203451 GGGGATCTCGCGGGAGTA 60.203 66.667 26.49 15.06 41.26 2.59
502 516 2.321263 ATCTCGCGGGAGTAGGTCGA 62.321 60.000 26.49 8.45 41.26 4.20
514 528 4.320494 GGAGTAGGTCGACGTTTGTCTTAA 60.320 45.833 16.86 0.00 43.21 1.85
548 576 1.792006 ATCCGGTCTTTGTTCGTGTC 58.208 50.000 0.00 0.00 0.00 3.67
571 600 2.561569 GACAGGTTGGATATTCCCGTG 58.438 52.381 0.00 0.00 35.03 4.94
698 728 1.144936 GTGAAGGAGGGGCGATGAG 59.855 63.158 0.00 0.00 0.00 2.90
737 767 5.915196 GGCTGGATTCAGTTTTTATAATCGC 59.085 40.000 2.16 0.00 42.78 4.58
770 853 7.446319 GTGGTCCTGATTGATGATGATGAATAA 59.554 37.037 0.00 0.00 0.00 1.40
773 856 9.841880 GTCCTGATTGATGATGATGAATAAATG 57.158 33.333 0.00 0.00 0.00 2.32
792 875 6.901081 AAATGAGAAGGTTTACCCAAGAAG 57.099 37.500 0.00 0.00 36.42 2.85
840 923 1.289380 GGTGACGTCTCCTCGCTTT 59.711 57.895 25.66 0.00 0.00 3.51
861 948 6.238239 GCTTTTCCCGTTTGCTATTTTTGAAA 60.238 34.615 0.00 0.00 0.00 2.69
937 1024 3.626924 CCTATTCCCTCCGCCCCG 61.627 72.222 0.00 0.00 0.00 5.73
958 1050 2.511659 CTGATCCATCGCCATTTCCAT 58.488 47.619 0.00 0.00 0.00 3.41
961 1053 0.178992 TCCATCGCCATTTCCATCCC 60.179 55.000 0.00 0.00 0.00 3.85
994 1094 2.103143 CTGCTCTCCGTACCTGCG 59.897 66.667 0.00 0.00 0.00 5.18
1021 1121 1.516386 CTGTCGTCGATGTTCGGGG 60.516 63.158 4.21 0.00 40.88 5.73
1526 1636 2.423446 GGCATGCCCTACTCGGAG 59.577 66.667 27.24 2.83 33.16 4.63
1565 1675 2.479275 GGTCAAGGAGCAAGTACGTTTC 59.521 50.000 0.00 0.00 0.00 2.78
1580 1690 1.228533 GTTTCTTTTACGCACCCCGA 58.771 50.000 0.00 0.00 41.02 5.14
1599 1709 2.799562 CGACTGCTCGATCAAATGCCTA 60.800 50.000 0.00 0.00 43.06 3.93
1620 1731 7.099120 GCCTACAAGAAATCAAATTGTGGATT 58.901 34.615 2.71 0.00 37.54 3.01
1621 1732 7.063780 GCCTACAAGAAATCAAATTGTGGATTG 59.936 37.037 2.71 0.00 37.54 2.67
1646 1757 2.975732 TGCTGCCTCTGATCTAACTG 57.024 50.000 0.00 0.00 0.00 3.16
1647 1758 1.483827 TGCTGCCTCTGATCTAACTGG 59.516 52.381 0.00 0.00 0.00 4.00
1755 1866 2.335681 TGGACTTCATGGTGGTCCTA 57.664 50.000 22.96 13.03 46.76 2.94
1926 2037 5.293814 CACAAAGCAGATCATCGAGATTCTT 59.706 40.000 0.00 0.00 37.00 2.52
1986 2097 2.050269 CCTCGGCGAGGTCCATATT 58.950 57.895 40.56 0.00 44.25 1.28
2444 2564 0.533491 CATCCCCAAACCTCGACGTA 59.467 55.000 0.00 0.00 0.00 3.57
2507 2627 2.743718 CCAGAGGACCGCACACTT 59.256 61.111 0.00 0.00 0.00 3.16
2551 2671 2.286523 CCCTTGTCGGTCTCCTGCT 61.287 63.158 0.00 0.00 0.00 4.24
2561 2681 1.043673 GTCTCCTGCTGTACCCGGAT 61.044 60.000 0.73 0.00 0.00 4.18
2705 2825 2.896443 GAGGGCCAGGAGAACTCG 59.104 66.667 6.18 0.00 0.00 4.18
2711 2831 4.069232 CAGGAGAACTCGGCCGCA 62.069 66.667 23.51 8.85 0.00 5.69
2712 2832 3.311110 AGGAGAACTCGGCCGCAA 61.311 61.111 23.51 2.44 0.00 4.85
2810 2930 1.765314 CTCCTGAAGGATGGGACGATT 59.235 52.381 0.00 0.00 44.46 3.34
2846 2966 1.959042 CTAGCACGGCCATCTTCAAT 58.041 50.000 2.24 0.00 0.00 2.57
2900 3020 4.467084 GAGGCCGGCATCGTTCCA 62.467 66.667 30.85 0.00 32.15 3.53
2918 3038 3.225104 TCCAGTGCTGCTCAAAATTCTT 58.775 40.909 0.00 0.00 0.00 2.52
3125 3245 4.039488 CACAATAATGCCCTTATGGTGCAT 59.961 41.667 14.11 14.11 42.22 3.96
3131 3251 0.397535 CCCTTATGGTGCATGCCCTT 60.398 55.000 16.68 15.54 0.00 3.95
3146 3266 2.045926 CTTGGGTTCGGCCTCCAG 60.046 66.667 0.00 0.00 37.43 3.86
3207 3327 2.856222 CACAGAGGAAGGCAAACTCTT 58.144 47.619 2.67 0.00 39.44 2.85
3231 3351 2.282745 AGCTTGCCCAGAAGTGCC 60.283 61.111 0.00 0.00 0.00 5.01
3236 3356 0.899717 TTGCCCAGAAGTGCCAATCC 60.900 55.000 0.00 0.00 0.00 3.01
3256 3376 7.040823 CCAATCCTAGAAGAAGAATTATGCACC 60.041 40.741 0.00 0.00 0.00 5.01
3268 3388 6.560711 AGAATTATGCACCGTGGAATTAAAC 58.439 36.000 0.00 0.00 0.00 2.01
3270 3390 1.982660 TGCACCGTGGAATTAAACCA 58.017 45.000 0.00 1.37 34.84 3.67
3281 3401 6.007936 TGGAATTAAACCACTTGATGAACG 57.992 37.500 1.37 0.00 32.03 3.95
3282 3402 4.857037 GGAATTAAACCACTTGATGAACGC 59.143 41.667 0.00 0.00 0.00 4.84
3283 3403 5.446143 AATTAAACCACTTGATGAACGCA 57.554 34.783 0.00 0.00 0.00 5.24
3284 3404 4.481930 TTAAACCACTTGATGAACGCAG 57.518 40.909 0.00 0.00 0.00 5.18
3288 3408 0.094216 CACTTGATGAACGCAGCTCG 59.906 55.000 4.36 4.36 45.38 5.03
3290 3410 1.070821 CTTGATGAACGCAGCTCGAA 58.929 50.000 11.64 0.00 41.67 3.71
3294 3414 1.461127 GATGAACGCAGCTCGAAACTT 59.539 47.619 11.64 0.00 41.67 2.66
3297 3417 2.220133 TGAACGCAGCTCGAAACTTAAC 59.780 45.455 11.64 0.00 41.67 2.01
3310 3430 4.210328 CGAAACTTAACCAATGGTTTTGCC 59.790 41.667 23.84 7.32 44.33 4.52
3316 3436 6.268847 ACTTAACCAATGGTTTTGCCTGAATA 59.731 34.615 23.84 0.00 44.33 1.75
3317 3437 4.806640 ACCAATGGTTTTGCCTGAATAG 57.193 40.909 0.00 0.00 38.35 1.73
3318 3438 4.159557 ACCAATGGTTTTGCCTGAATAGT 58.840 39.130 0.00 0.00 38.35 2.12
3319 3439 4.021192 ACCAATGGTTTTGCCTGAATAGTG 60.021 41.667 0.00 0.00 38.35 2.74
3325 3445 4.521256 GGTTTTGCCTGAATAGTGTTGGTA 59.479 41.667 0.00 0.00 0.00 3.25
3326 3446 5.010213 GGTTTTGCCTGAATAGTGTTGGTAA 59.990 40.000 0.00 0.00 0.00 2.85
3341 3461 5.355350 GTGTTGGTAATGGAAAGAGATGGAG 59.645 44.000 0.00 0.00 0.00 3.86
3352 3472 3.196939 AGAGATGGAGAAGAGCAATGC 57.803 47.619 0.00 0.00 0.00 3.56
3354 3474 2.613133 GAGATGGAGAAGAGCAATGCAC 59.387 50.000 8.35 0.00 0.00 4.57
3356 3476 2.502142 TGGAGAAGAGCAATGCACAT 57.498 45.000 8.35 0.00 0.00 3.21
3361 3481 4.352039 GAGAAGAGCAATGCACATTGATG 58.648 43.478 23.92 2.34 46.10 3.07
3365 3485 2.223735 GAGCAATGCACATTGATGGGAG 60.224 50.000 23.92 0.00 46.10 4.30
3393 3514 2.996249 ACATAGATGGCTGTCAGGTG 57.004 50.000 1.14 0.00 0.00 4.00
3405 3526 4.241681 GCTGTCAGGTGAGTTTCTAAGAG 58.758 47.826 1.14 0.00 0.00 2.85
3413 3534 6.593382 CAGGTGAGTTTCTAAGAGGAATGAAG 59.407 42.308 0.00 0.00 0.00 3.02
3415 3536 7.181845 AGGTGAGTTTCTAAGAGGAATGAAGAT 59.818 37.037 0.00 0.00 0.00 2.40
3416 3537 7.279758 GGTGAGTTTCTAAGAGGAATGAAGATG 59.720 40.741 0.00 0.00 0.00 2.90
3439 3565 7.667043 TGGTACATACACAAGTGAAAATCTC 57.333 36.000 7.28 0.00 0.00 2.75
3451 3577 9.125026 ACAAGTGAAAATCTCTGACAGTTAATT 57.875 29.630 1.59 0.00 0.00 1.40
3462 3588 6.898041 TCTGACAGTTAATTTTGTTCATCGG 58.102 36.000 1.59 0.00 0.00 4.18
3467 3593 7.484975 ACAGTTAATTTTGTTCATCGGTTGAA 58.515 30.769 0.00 0.00 42.09 2.69
3488 3622 5.765182 TGAAGAACTGGAAGAAATGAAGGAC 59.235 40.000 0.00 0.00 37.43 3.85
3496 3630 7.989741 ACTGGAAGAAATGAAGGACATATACTG 59.010 37.037 0.00 0.00 36.17 2.74
3502 3636 9.201989 AGAAATGAAGGACATATACTGTACTCA 57.798 33.333 0.00 3.18 46.84 3.41
3503 3637 9.250624 GAAATGAAGGACATATACTGTACTCAC 57.749 37.037 0.00 1.70 46.84 3.51
3578 3716 8.853077 TGTGAAAGATGTGTTGATATTTCTCT 57.147 30.769 0.00 0.00 35.49 3.10
3579 3717 9.942850 TGTGAAAGATGTGTTGATATTTCTCTA 57.057 29.630 0.00 0.00 35.49 2.43
3582 3720 8.970859 AAAGATGTGTTGATATTTCTCTAGGG 57.029 34.615 0.00 0.00 0.00 3.53
3614 3756 6.285224 TCTGAAACTACTGAATTTTCGTCCA 58.715 36.000 0.00 0.00 32.83 4.02
3630 3772 3.051210 CAGACAGTGGACTCGGCA 58.949 61.111 0.00 0.00 0.00 5.69
3634 3776 1.134220 AGACAGTGGACTCGGCAAAAA 60.134 47.619 0.00 0.00 0.00 1.94
3677 3819 5.337491 CCAAACAGGCCATTAGTTGCTTTAT 60.337 40.000 5.01 0.00 0.00 1.40
3679 3821 4.599041 ACAGGCCATTAGTTGCTTTATGA 58.401 39.130 5.01 0.00 0.00 2.15
3694 3836 4.736793 GCTTTATGATCGAAGTGGCATTTG 59.263 41.667 0.00 0.00 0.00 2.32
3789 3931 5.761165 TTCCCGGAAAAAGAACTTACAAG 57.239 39.130 0.73 0.00 0.00 3.16
3820 3995 2.375174 TCTGTGATGGCCCTGTTTTACT 59.625 45.455 0.00 0.00 0.00 2.24
3821 3996 3.585289 TCTGTGATGGCCCTGTTTTACTA 59.415 43.478 0.00 0.00 0.00 1.82
3822 3997 3.941483 CTGTGATGGCCCTGTTTTACTAG 59.059 47.826 0.00 0.00 0.00 2.57
3823 3998 3.279434 GTGATGGCCCTGTTTTACTAGG 58.721 50.000 0.00 0.00 0.00 3.02
3824 3999 3.054655 GTGATGGCCCTGTTTTACTAGGA 60.055 47.826 0.00 0.00 36.11 2.94
3825 4000 3.589735 TGATGGCCCTGTTTTACTAGGAA 59.410 43.478 0.00 0.00 36.11 3.36
3826 4001 3.713826 TGGCCCTGTTTTACTAGGAAG 57.286 47.619 0.00 0.00 36.11 3.46
3827 4002 2.290705 TGGCCCTGTTTTACTAGGAAGC 60.291 50.000 0.00 0.00 36.11 3.86
3828 4003 2.026169 GGCCCTGTTTTACTAGGAAGCT 60.026 50.000 0.00 0.00 36.11 3.74
3829 4004 3.561528 GGCCCTGTTTTACTAGGAAGCTT 60.562 47.826 0.00 0.00 36.11 3.74
3830 4005 3.690139 GCCCTGTTTTACTAGGAAGCTTC 59.310 47.826 18.54 18.54 36.11 3.86
3843 4018 1.457346 AAGCTTCCTTGATGCTTCGG 58.543 50.000 10.40 0.00 45.51 4.30
3844 4019 0.393537 AGCTTCCTTGATGCTTCGGG 60.394 55.000 0.00 5.45 39.48 5.14
3845 4020 1.379642 GCTTCCTTGATGCTTCGGGG 61.380 60.000 10.15 7.60 31.35 5.73
3846 4021 1.378514 TTCCTTGATGCTTCGGGGC 60.379 57.895 10.15 0.00 0.00 5.80
3847 4022 1.852157 TTCCTTGATGCTTCGGGGCT 61.852 55.000 10.15 0.00 0.00 5.19
3848 4023 1.821332 CCTTGATGCTTCGGGGCTC 60.821 63.158 0.00 0.00 0.00 4.70
3849 4024 1.222936 CTTGATGCTTCGGGGCTCT 59.777 57.895 0.00 0.00 0.00 4.09
3850 4025 0.465705 CTTGATGCTTCGGGGCTCTA 59.534 55.000 0.00 0.00 0.00 2.43
3851 4026 0.178068 TTGATGCTTCGGGGCTCTAC 59.822 55.000 0.00 0.00 0.00 2.59
3852 4027 0.975556 TGATGCTTCGGGGCTCTACA 60.976 55.000 0.00 0.00 0.00 2.74
3853 4028 0.394565 GATGCTTCGGGGCTCTACAT 59.605 55.000 2.67 0.00 0.00 2.29
3854 4029 0.394565 ATGCTTCGGGGCTCTACATC 59.605 55.000 2.67 0.00 0.00 3.06
3855 4030 1.069935 GCTTCGGGGCTCTACATCC 59.930 63.158 0.00 0.00 0.00 3.51
3856 4031 1.749033 CTTCGGGGCTCTACATCCC 59.251 63.158 0.00 0.00 41.87 3.85
3857 4032 1.002403 TTCGGGGCTCTACATCCCA 59.998 57.895 0.00 0.00 44.43 4.37
3858 4033 0.619255 TTCGGGGCTCTACATCCCAA 60.619 55.000 0.00 0.00 44.43 4.12
3859 4034 0.619255 TCGGGGCTCTACATCCCAAA 60.619 55.000 0.00 0.00 44.43 3.28
3860 4035 0.474184 CGGGGCTCTACATCCCAAAT 59.526 55.000 0.00 0.00 44.43 2.32
3861 4036 1.815408 CGGGGCTCTACATCCCAAATG 60.815 57.143 0.00 0.00 44.43 2.32
3862 4037 1.322442 GGGCTCTACATCCCAAATGC 58.678 55.000 0.00 0.00 42.18 3.56
3863 4038 1.322442 GGCTCTACATCCCAAATGCC 58.678 55.000 0.00 0.00 0.00 4.40
3864 4039 1.322442 GCTCTACATCCCAAATGCCC 58.678 55.000 0.00 0.00 0.00 5.36
3865 4040 1.410083 GCTCTACATCCCAAATGCCCA 60.410 52.381 0.00 0.00 0.00 5.36
3866 4041 2.949963 GCTCTACATCCCAAATGCCCAA 60.950 50.000 0.00 0.00 0.00 4.12
3867 4042 2.689983 CTCTACATCCCAAATGCCCAAC 59.310 50.000 0.00 0.00 0.00 3.77
3868 4043 2.042297 TCTACATCCCAAATGCCCAACA 59.958 45.455 0.00 0.00 0.00 3.33
3869 4044 1.727062 ACATCCCAAATGCCCAACAA 58.273 45.000 0.00 0.00 0.00 2.83
3870 4045 1.347378 ACATCCCAAATGCCCAACAAC 59.653 47.619 0.00 0.00 0.00 3.32
3871 4046 1.624813 CATCCCAAATGCCCAACAACT 59.375 47.619 0.00 0.00 0.00 3.16
3872 4047 1.047002 TCCCAAATGCCCAACAACTG 58.953 50.000 0.00 0.00 0.00 3.16
3873 4048 0.758123 CCCAAATGCCCAACAACTGT 59.242 50.000 0.00 0.00 0.00 3.55
3874 4049 1.967066 CCCAAATGCCCAACAACTGTA 59.033 47.619 0.00 0.00 0.00 2.74
3875 4050 2.288763 CCCAAATGCCCAACAACTGTAC 60.289 50.000 0.00 0.00 0.00 2.90
3876 4051 2.627699 CCAAATGCCCAACAACTGTACT 59.372 45.455 0.00 0.00 0.00 2.73
3877 4052 3.823873 CCAAATGCCCAACAACTGTACTA 59.176 43.478 0.00 0.00 0.00 1.82
3878 4053 4.279671 CCAAATGCCCAACAACTGTACTAA 59.720 41.667 0.00 0.00 0.00 2.24
3879 4054 5.219633 CAAATGCCCAACAACTGTACTAAC 58.780 41.667 0.00 0.00 0.00 2.34
3880 4055 3.562343 TGCCCAACAACTGTACTAACA 57.438 42.857 0.00 0.00 0.00 2.41
3881 4056 3.207778 TGCCCAACAACTGTACTAACAC 58.792 45.455 0.00 0.00 0.00 3.32
3882 4057 3.207778 GCCCAACAACTGTACTAACACA 58.792 45.455 0.00 0.00 0.00 3.72
3883 4058 3.002965 GCCCAACAACTGTACTAACACAC 59.997 47.826 0.00 0.00 0.00 3.82
3884 4059 4.193090 CCCAACAACTGTACTAACACACA 58.807 43.478 0.00 0.00 0.00 3.72
3885 4060 4.819630 CCCAACAACTGTACTAACACACAT 59.180 41.667 0.00 0.00 0.00 3.21
3886 4061 5.049680 CCCAACAACTGTACTAACACACATC 60.050 44.000 0.00 0.00 0.00 3.06
3887 4062 5.758296 CCAACAACTGTACTAACACACATCT 59.242 40.000 0.00 0.00 0.00 2.90
3888 4063 6.260050 CCAACAACTGTACTAACACACATCTT 59.740 38.462 0.00 0.00 0.00 2.40
3889 4064 7.345192 CAACAACTGTACTAACACACATCTTC 58.655 38.462 0.00 0.00 0.00 2.87
3890 4065 6.817184 ACAACTGTACTAACACACATCTTCT 58.183 36.000 0.00 0.00 0.00 2.85
3891 4066 7.272978 ACAACTGTACTAACACACATCTTCTT 58.727 34.615 0.00 0.00 0.00 2.52
3892 4067 7.224753 ACAACTGTACTAACACACATCTTCTTG 59.775 37.037 0.00 0.00 0.00 3.02
3893 4068 7.050970 ACTGTACTAACACACATCTTCTTGA 57.949 36.000 0.00 0.00 0.00 3.02
3894 4069 7.148641 ACTGTACTAACACACATCTTCTTGAG 58.851 38.462 0.00 0.00 0.00 3.02
3895 4070 5.926542 TGTACTAACACACATCTTCTTGAGC 59.073 40.000 0.00 0.00 0.00 4.26
3896 4071 4.960938 ACTAACACACATCTTCTTGAGCA 58.039 39.130 0.00 0.00 0.00 4.26
3897 4072 5.555017 ACTAACACACATCTTCTTGAGCAT 58.445 37.500 0.00 0.00 0.00 3.79
3898 4073 6.701340 ACTAACACACATCTTCTTGAGCATA 58.299 36.000 0.00 0.00 0.00 3.14
3899 4074 7.161404 ACTAACACACATCTTCTTGAGCATAA 58.839 34.615 0.00 0.00 0.00 1.90
3900 4075 6.492007 AACACACATCTTCTTGAGCATAAG 57.508 37.500 0.00 0.00 0.00 1.73
3901 4076 4.394300 ACACACATCTTCTTGAGCATAAGC 59.606 41.667 0.00 0.00 42.56 3.09
3902 4077 4.393990 CACACATCTTCTTGAGCATAAGCA 59.606 41.667 0.00 0.00 45.49 3.91
3903 4078 5.066117 CACACATCTTCTTGAGCATAAGCAT 59.934 40.000 0.00 0.00 45.49 3.79
3904 4079 6.259387 CACACATCTTCTTGAGCATAAGCATA 59.741 38.462 0.00 0.00 45.49 3.14
3905 4080 6.996879 ACACATCTTCTTGAGCATAAGCATAT 59.003 34.615 0.00 0.00 45.49 1.78
3906 4081 7.172875 ACACATCTTCTTGAGCATAAGCATATC 59.827 37.037 0.00 0.00 45.49 1.63
3907 4082 7.388224 CACATCTTCTTGAGCATAAGCATATCT 59.612 37.037 0.00 0.00 45.49 1.98
3908 4083 7.603404 ACATCTTCTTGAGCATAAGCATATCTC 59.397 37.037 0.00 0.00 45.49 2.75
3909 4084 6.462500 TCTTCTTGAGCATAAGCATATCTCC 58.538 40.000 0.00 0.00 45.49 3.71
3910 4085 5.813513 TCTTGAGCATAAGCATATCTCCA 57.186 39.130 0.00 0.00 45.49 3.86
3911 4086 6.178607 TCTTGAGCATAAGCATATCTCCAA 57.821 37.500 0.00 0.00 45.49 3.53
3912 4087 5.994054 TCTTGAGCATAAGCATATCTCCAAC 59.006 40.000 0.00 0.00 45.49 3.77
3913 4088 4.309933 TGAGCATAAGCATATCTCCAACG 58.690 43.478 0.00 0.00 45.49 4.10
3914 4089 4.202253 TGAGCATAAGCATATCTCCAACGT 60.202 41.667 0.00 0.00 45.49 3.99
3915 4090 4.708177 AGCATAAGCATATCTCCAACGTT 58.292 39.130 0.00 0.00 45.49 3.99
3916 4091 4.512944 AGCATAAGCATATCTCCAACGTTG 59.487 41.667 21.47 21.47 45.49 4.10
3917 4092 4.273480 GCATAAGCATATCTCCAACGTTGT 59.727 41.667 25.63 10.69 41.58 3.32
3918 4093 5.220854 GCATAAGCATATCTCCAACGTTGTT 60.221 40.000 25.63 12.81 41.58 2.83
3919 4094 6.018262 GCATAAGCATATCTCCAACGTTGTTA 60.018 38.462 25.63 14.43 41.58 2.41
3920 4095 7.307989 GCATAAGCATATCTCCAACGTTGTTAT 60.308 37.037 25.63 17.27 41.58 1.89
3921 4096 8.559536 CATAAGCATATCTCCAACGTTGTTATT 58.440 33.333 25.63 11.12 0.00 1.40
3922 4097 7.391148 AAGCATATCTCCAACGTTGTTATTT 57.609 32.000 25.63 9.80 0.00 1.40
3923 4098 7.391148 AGCATATCTCCAACGTTGTTATTTT 57.609 32.000 25.63 8.83 0.00 1.82
3924 4099 7.826690 AGCATATCTCCAACGTTGTTATTTTT 58.173 30.769 25.63 7.38 0.00 1.94
3963 4138 9.017509 TCCAATCTATTCATCTTCAATTATGGC 57.982 33.333 0.00 0.00 0.00 4.40
3964 4139 8.799367 CCAATCTATTCATCTTCAATTATGGCA 58.201 33.333 0.00 0.00 0.00 4.92
3971 4146 9.754382 ATTCATCTTCAATTATGGCAATACAAC 57.246 29.630 0.00 0.00 0.00 3.32
3972 4147 7.416817 TCATCTTCAATTATGGCAATACAACG 58.583 34.615 0.00 0.00 0.00 4.10
3973 4148 6.993786 TCTTCAATTATGGCAATACAACGA 57.006 33.333 0.00 0.00 0.00 3.85
3974 4149 7.384439 TCTTCAATTATGGCAATACAACGAA 57.616 32.000 0.00 0.00 0.00 3.85
3975 4150 7.247728 TCTTCAATTATGGCAATACAACGAAC 58.752 34.615 0.00 0.00 0.00 3.95
3976 4151 6.502136 TCAATTATGGCAATACAACGAACA 57.498 33.333 0.00 0.00 0.00 3.18
3977 4152 6.318628 TCAATTATGGCAATACAACGAACAC 58.681 36.000 0.00 0.00 0.00 3.32
3978 4153 4.688511 TTATGGCAATACAACGAACACC 57.311 40.909 0.00 0.00 0.00 4.16
3979 4154 1.968704 TGGCAATACAACGAACACCA 58.031 45.000 0.00 0.00 0.00 4.17
3980 4155 1.876799 TGGCAATACAACGAACACCAG 59.123 47.619 0.00 0.00 0.00 4.00
3981 4156 2.147958 GGCAATACAACGAACACCAGA 58.852 47.619 0.00 0.00 0.00 3.86
3982 4157 2.550606 GGCAATACAACGAACACCAGAA 59.449 45.455 0.00 0.00 0.00 3.02
3983 4158 3.003897 GGCAATACAACGAACACCAGAAA 59.996 43.478 0.00 0.00 0.00 2.52
3984 4159 4.320935 GGCAATACAACGAACACCAGAAAT 60.321 41.667 0.00 0.00 0.00 2.17
3985 4160 5.106475 GGCAATACAACGAACACCAGAAATA 60.106 40.000 0.00 0.00 0.00 1.40
3986 4161 6.375377 GCAATACAACGAACACCAGAAATAA 58.625 36.000 0.00 0.00 0.00 1.40
3987 4162 7.027161 GCAATACAACGAACACCAGAAATAAT 58.973 34.615 0.00 0.00 0.00 1.28
3988 4163 8.178964 GCAATACAACGAACACCAGAAATAATA 58.821 33.333 0.00 0.00 0.00 0.98
3993 4168 9.974980 ACAACGAACACCAGAAATAATAAAAAT 57.025 25.926 0.00 0.00 0.00 1.82
4012 4187 7.923414 AAAAATTACATCCAGGTCTGTAGAC 57.077 36.000 3.43 3.43 44.04 2.59
4022 4197 2.119801 GTCTGTAGACCACCTACCGA 57.880 55.000 0.48 0.00 45.60 4.69
4023 4198 2.652590 GTCTGTAGACCACCTACCGAT 58.347 52.381 0.48 0.00 45.60 4.18
4024 4199 2.358267 GTCTGTAGACCACCTACCGATG 59.642 54.545 0.48 0.00 45.60 3.84
4025 4200 2.240414 TCTGTAGACCACCTACCGATGA 59.760 50.000 0.00 0.00 45.60 2.92
4026 4201 2.358267 CTGTAGACCACCTACCGATGAC 59.642 54.545 0.00 0.00 45.60 3.06
4027 4202 2.025605 TGTAGACCACCTACCGATGACT 60.026 50.000 0.00 0.00 45.60 3.41
4028 4203 3.200605 TGTAGACCACCTACCGATGACTA 59.799 47.826 0.00 0.00 45.60 2.59
4029 4204 2.652590 AGACCACCTACCGATGACTAC 58.347 52.381 0.00 0.00 0.00 2.73
4030 4205 2.025605 AGACCACCTACCGATGACTACA 60.026 50.000 0.00 0.00 0.00 2.74
4031 4206 2.756760 GACCACCTACCGATGACTACAA 59.243 50.000 0.00 0.00 0.00 2.41
4032 4207 3.167485 ACCACCTACCGATGACTACAAA 58.833 45.455 0.00 0.00 0.00 2.83
4033 4208 3.056322 ACCACCTACCGATGACTACAAAC 60.056 47.826 0.00 0.00 0.00 2.93
4034 4209 3.056393 CCACCTACCGATGACTACAAACA 60.056 47.826 0.00 0.00 0.00 2.83
4035 4210 3.924686 CACCTACCGATGACTACAAACAC 59.075 47.826 0.00 0.00 0.00 3.32
4036 4211 3.830755 ACCTACCGATGACTACAAACACT 59.169 43.478 0.00 0.00 0.00 3.55
4037 4212 4.174009 CCTACCGATGACTACAAACACTG 58.826 47.826 0.00 0.00 0.00 3.66
4038 4213 4.082408 CCTACCGATGACTACAAACACTGA 60.082 45.833 0.00 0.00 0.00 3.41
4039 4214 4.330944 ACCGATGACTACAAACACTGAA 57.669 40.909 0.00 0.00 0.00 3.02
4040 4215 4.307432 ACCGATGACTACAAACACTGAAG 58.693 43.478 0.00 0.00 0.00 3.02
4041 4216 3.123621 CCGATGACTACAAACACTGAAGC 59.876 47.826 0.00 0.00 0.00 3.86
4042 4217 3.181540 CGATGACTACAAACACTGAAGCG 60.182 47.826 0.00 0.00 0.00 4.68
4043 4218 3.446310 TGACTACAAACACTGAAGCGA 57.554 42.857 0.00 0.00 0.00 4.93
4044 4219 3.381045 TGACTACAAACACTGAAGCGAG 58.619 45.455 0.00 0.00 0.00 5.03
4045 4220 2.135933 ACTACAAACACTGAAGCGAGC 58.864 47.619 0.00 0.00 0.00 5.03
4046 4221 1.461127 CTACAAACACTGAAGCGAGCC 59.539 52.381 0.00 0.00 0.00 4.70
4047 4222 1.205064 CAAACACTGAAGCGAGCCG 59.795 57.895 0.00 0.00 0.00 5.52
4048 4223 1.069090 AAACACTGAAGCGAGCCGA 59.931 52.632 0.00 0.00 0.00 5.54
4049 4224 0.531974 AAACACTGAAGCGAGCCGAA 60.532 50.000 0.00 0.00 0.00 4.30
4050 4225 0.946221 AACACTGAAGCGAGCCGAAG 60.946 55.000 0.00 0.00 0.00 3.79
4076 4251 3.770040 CTGTCATCGCCCGTCCCA 61.770 66.667 0.00 0.00 0.00 4.37
4077 4252 4.077184 TGTCATCGCCCGTCCCAC 62.077 66.667 0.00 0.00 0.00 4.61
4078 4253 4.077184 GTCATCGCCCGTCCCACA 62.077 66.667 0.00 0.00 0.00 4.17
4079 4254 4.077184 TCATCGCCCGTCCCACAC 62.077 66.667 0.00 0.00 0.00 3.82
4084 4259 4.394712 GCCCGTCCCACACCAGAG 62.395 72.222 0.00 0.00 0.00 3.35
4085 4260 4.394712 CCCGTCCCACACCAGAGC 62.395 72.222 0.00 0.00 0.00 4.09
4086 4261 4.394712 CCGTCCCACACCAGAGCC 62.395 72.222 0.00 0.00 0.00 4.70
4087 4262 4.742201 CGTCCCACACCAGAGCCG 62.742 72.222 0.00 0.00 0.00 5.52
4088 4263 4.394712 GTCCCACACCAGAGCCGG 62.395 72.222 0.00 0.00 0.00 6.13
4092 4267 4.641645 CACACCAGAGCCGGGCAA 62.642 66.667 23.09 0.00 0.00 4.52
4093 4268 3.884774 ACACCAGAGCCGGGCAAA 61.885 61.111 23.09 0.00 0.00 3.68
4094 4269 2.597217 CACCAGAGCCGGGCAAAA 60.597 61.111 23.09 0.00 0.00 2.44
4095 4270 2.597510 ACCAGAGCCGGGCAAAAC 60.598 61.111 23.09 9.43 0.00 2.43
4096 4271 2.282462 CCAGAGCCGGGCAAAACT 60.282 61.111 23.09 11.60 0.00 2.66
4097 4272 1.903404 CCAGAGCCGGGCAAAACTT 60.903 57.895 23.09 0.00 0.00 2.66
4098 4273 1.286880 CAGAGCCGGGCAAAACTTG 59.713 57.895 23.09 5.96 0.00 3.16
4099 4274 1.152756 AGAGCCGGGCAAAACTTGT 60.153 52.632 23.09 0.00 0.00 3.16
4100 4275 0.755327 AGAGCCGGGCAAAACTTGTT 60.755 50.000 23.09 0.00 0.00 2.83
4101 4276 0.597377 GAGCCGGGCAAAACTTGTTG 60.597 55.000 23.09 0.00 0.00 3.33
4102 4277 1.142965 GCCGGGCAAAACTTGTTGT 59.857 52.632 15.62 0.00 0.00 3.32
4103 4278 0.386113 GCCGGGCAAAACTTGTTGTA 59.614 50.000 15.62 0.00 0.00 2.41
4104 4279 1.601914 GCCGGGCAAAACTTGTTGTAG 60.602 52.381 15.62 0.00 0.00 2.74
4105 4280 1.679153 CCGGGCAAAACTTGTTGTAGT 59.321 47.619 0.00 0.00 0.00 2.73
4106 4281 2.879646 CCGGGCAAAACTTGTTGTAGTA 59.120 45.455 0.00 0.00 0.00 1.82
4107 4282 3.058501 CCGGGCAAAACTTGTTGTAGTAG 60.059 47.826 0.00 0.00 0.00 2.57
4108 4283 3.810941 CGGGCAAAACTTGTTGTAGTAGA 59.189 43.478 0.00 0.00 0.00 2.59
4109 4284 4.319261 CGGGCAAAACTTGTTGTAGTAGAC 60.319 45.833 0.00 0.00 0.00 2.59
4110 4285 4.577283 GGGCAAAACTTGTTGTAGTAGACA 59.423 41.667 0.00 0.00 35.78 3.41
4111 4286 5.277828 GGGCAAAACTTGTTGTAGTAGACAG 60.278 44.000 0.00 0.00 39.88 3.51
4112 4287 5.296035 GGCAAAACTTGTTGTAGTAGACAGT 59.704 40.000 0.00 0.00 39.88 3.55
4113 4288 6.419771 GCAAAACTTGTTGTAGTAGACAGTC 58.580 40.000 0.00 0.00 39.88 3.51
4114 4289 6.637365 CAAAACTTGTTGTAGTAGACAGTCG 58.363 40.000 0.00 0.00 39.88 4.18
4115 4290 4.500603 ACTTGTTGTAGTAGACAGTCGG 57.499 45.455 0.00 0.00 39.88 4.79
4116 4291 3.255149 ACTTGTTGTAGTAGACAGTCGGG 59.745 47.826 0.00 0.00 39.88 5.14
4117 4292 3.144657 TGTTGTAGTAGACAGTCGGGA 57.855 47.619 0.00 0.00 39.88 5.14
4118 4293 3.489355 TGTTGTAGTAGACAGTCGGGAA 58.511 45.455 0.00 0.00 39.88 3.97
4119 4294 3.504906 TGTTGTAGTAGACAGTCGGGAAG 59.495 47.826 0.00 0.00 39.88 3.46
4120 4295 3.430042 TGTAGTAGACAGTCGGGAAGT 57.570 47.619 0.00 0.00 32.86 3.01
4121 4296 3.341823 TGTAGTAGACAGTCGGGAAGTC 58.658 50.000 0.00 0.00 32.86 3.01
4122 4297 1.451067 AGTAGACAGTCGGGAAGTCG 58.549 55.000 0.00 0.00 37.36 4.18
4123 4298 1.163554 GTAGACAGTCGGGAAGTCGT 58.836 55.000 0.00 0.00 37.36 4.34
4124 4299 1.130186 GTAGACAGTCGGGAAGTCGTC 59.870 57.143 0.00 0.00 37.36 4.20
4125 4300 1.154263 GACAGTCGGGAAGTCGTCG 60.154 63.158 0.00 0.00 0.00 5.12
4126 4301 1.849976 GACAGTCGGGAAGTCGTCGT 61.850 60.000 0.00 0.00 0.00 4.34
4127 4302 1.442184 CAGTCGGGAAGTCGTCGTG 60.442 63.158 0.00 0.00 0.00 4.35
4128 4303 2.804090 GTCGGGAAGTCGTCGTGC 60.804 66.667 0.00 0.00 0.00 5.34
4129 4304 2.981909 TCGGGAAGTCGTCGTGCT 60.982 61.111 0.00 0.00 0.00 4.40
4130 4305 1.672030 TCGGGAAGTCGTCGTGCTA 60.672 57.895 0.00 0.00 0.00 3.49
4131 4306 1.210931 CGGGAAGTCGTCGTGCTAA 59.789 57.895 0.00 0.00 0.00 3.09
4132 4307 0.797249 CGGGAAGTCGTCGTGCTAAG 60.797 60.000 0.00 0.00 0.00 2.18
4133 4308 0.458025 GGGAAGTCGTCGTGCTAAGG 60.458 60.000 0.00 0.00 0.00 2.69
4134 4309 0.243095 GGAAGTCGTCGTGCTAAGGT 59.757 55.000 0.00 0.00 0.00 3.50
4135 4310 1.615502 GAAGTCGTCGTGCTAAGGTC 58.384 55.000 0.00 0.00 0.00 3.85
4136 4311 0.243095 AAGTCGTCGTGCTAAGGTCC 59.757 55.000 0.00 0.00 0.00 4.46
4137 4312 1.153881 GTCGTCGTGCTAAGGTCCC 60.154 63.158 0.00 0.00 0.00 4.46
4138 4313 1.604308 TCGTCGTGCTAAGGTCCCA 60.604 57.895 0.00 0.00 0.00 4.37
4139 4314 0.968901 TCGTCGTGCTAAGGTCCCAT 60.969 55.000 0.00 0.00 0.00 4.00
4140 4315 0.742505 CGTCGTGCTAAGGTCCCATA 59.257 55.000 0.00 0.00 0.00 2.74
4141 4316 1.269102 CGTCGTGCTAAGGTCCCATAG 60.269 57.143 0.00 0.00 0.00 2.23
4142 4317 1.068741 GTCGTGCTAAGGTCCCATAGG 59.931 57.143 0.00 0.00 0.00 2.57
4143 4318 1.063492 TCGTGCTAAGGTCCCATAGGA 60.063 52.381 0.00 0.00 41.08 2.94
4151 4326 4.908333 TCCCATAGGACCAGCACA 57.092 55.556 0.00 0.00 37.19 4.57
4152 4327 2.607811 TCCCATAGGACCAGCACAG 58.392 57.895 0.00 0.00 37.19 3.66
4153 4328 1.153086 CCCATAGGACCAGCACAGC 60.153 63.158 0.00 0.00 33.47 4.40
4154 4329 1.603842 CCATAGGACCAGCACAGCA 59.396 57.895 0.00 0.00 0.00 4.41
4155 4330 0.463295 CCATAGGACCAGCACAGCAG 60.463 60.000 0.00 0.00 0.00 4.24
4156 4331 0.538584 CATAGGACCAGCACAGCAGA 59.461 55.000 0.00 0.00 0.00 4.26
4157 4332 1.065926 CATAGGACCAGCACAGCAGAA 60.066 52.381 0.00 0.00 0.00 3.02
4158 4333 0.321671 TAGGACCAGCACAGCAGAAC 59.678 55.000 0.00 0.00 0.00 3.01
4159 4334 1.227943 GGACCAGCACAGCAGAACA 60.228 57.895 0.00 0.00 0.00 3.18
4160 4335 1.233285 GGACCAGCACAGCAGAACAG 61.233 60.000 0.00 0.00 0.00 3.16
4161 4336 1.849976 GACCAGCACAGCAGAACAGC 61.850 60.000 0.00 0.00 0.00 4.40
4162 4337 1.895231 CCAGCACAGCAGAACAGCA 60.895 57.895 0.00 0.00 36.85 4.41
4163 4338 1.449726 CCAGCACAGCAGAACAGCAA 61.450 55.000 0.00 0.00 36.85 3.91
4164 4339 0.317603 CAGCACAGCAGAACAGCAAC 60.318 55.000 0.00 0.00 36.85 4.17
4165 4340 1.008079 GCACAGCAGAACAGCAACC 60.008 57.895 0.00 0.00 36.85 3.77
4166 4341 1.280746 CACAGCAGAACAGCAACCG 59.719 57.895 0.00 0.00 36.85 4.44
4167 4342 2.253452 CAGCAGAACAGCAACCGC 59.747 61.111 0.00 0.00 36.85 5.68
4168 4343 2.980233 AGCAGAACAGCAACCGCC 60.980 61.111 0.00 0.00 39.83 6.13
4169 4344 4.389576 GCAGAACAGCAACCGCCG 62.390 66.667 0.00 0.00 39.83 6.46
4170 4345 4.389576 CAGAACAGCAACCGCCGC 62.390 66.667 0.00 0.00 39.83 6.53
4178 4353 3.864686 CAACCGCCGCCGATGAAG 61.865 66.667 0.00 0.00 36.29 3.02
4179 4354 4.077184 AACCGCCGCCGATGAAGA 62.077 61.111 0.00 0.00 36.29 2.87
4180 4355 4.514577 ACCGCCGCCGATGAAGAG 62.515 66.667 0.00 0.00 36.29 2.85
4181 4356 4.514577 CCGCCGCCGATGAAGAGT 62.515 66.667 0.00 0.00 36.29 3.24
4182 4357 2.411701 CGCCGCCGATGAAGAGTA 59.588 61.111 0.00 0.00 36.29 2.59
4183 4358 1.658717 CGCCGCCGATGAAGAGTAG 60.659 63.158 0.00 0.00 36.29 2.57
4184 4359 1.951631 GCCGCCGATGAAGAGTAGC 60.952 63.158 0.00 0.00 0.00 3.58
4185 4360 1.658717 CCGCCGATGAAGAGTAGCG 60.659 63.158 0.00 0.00 42.99 4.26
4186 4361 1.064296 CGCCGATGAAGAGTAGCGT 59.936 57.895 0.00 0.00 38.81 5.07
4187 4362 0.306840 CGCCGATGAAGAGTAGCGTA 59.693 55.000 0.00 0.00 38.81 4.42
4188 4363 1.660614 CGCCGATGAAGAGTAGCGTAG 60.661 57.143 0.00 0.00 38.81 3.51
4189 4364 1.602851 GCCGATGAAGAGTAGCGTAGA 59.397 52.381 0.00 0.00 0.00 2.59
4190 4365 2.226912 GCCGATGAAGAGTAGCGTAGAT 59.773 50.000 0.00 0.00 0.00 1.98
4191 4366 3.668491 GCCGATGAAGAGTAGCGTAGATC 60.668 52.174 0.00 0.00 0.00 2.75
4192 4367 3.423776 CCGATGAAGAGTAGCGTAGATCG 60.424 52.174 0.00 0.00 43.12 3.69
4193 4368 3.423776 CGATGAAGAGTAGCGTAGATCGG 60.424 52.174 0.00 0.00 40.26 4.18
4215 4390 8.070034 TCGGTATGATCTAACCTAAAGAAACA 57.930 34.615 13.14 0.00 33.34 2.83
4216 4391 7.977853 TCGGTATGATCTAACCTAAAGAAACAC 59.022 37.037 13.14 0.00 33.34 3.32
4217 4392 7.762615 CGGTATGATCTAACCTAAAGAAACACA 59.237 37.037 13.14 0.00 33.34 3.72
4218 4393 9.444600 GGTATGATCTAACCTAAAGAAACACAA 57.555 33.333 9.14 0.00 32.72 3.33
4221 4396 8.740123 TGATCTAACCTAAAGAAACACAAACA 57.260 30.769 0.00 0.00 0.00 2.83
4222 4397 9.349713 TGATCTAACCTAAAGAAACACAAACAT 57.650 29.630 0.00 0.00 0.00 2.71
4227 4402 7.186021 ACCTAAAGAAACACAAACATAGACG 57.814 36.000 0.00 0.00 0.00 4.18
4228 4403 6.987992 ACCTAAAGAAACACAAACATAGACGA 59.012 34.615 0.00 0.00 0.00 4.20
4229 4404 7.496591 ACCTAAAGAAACACAAACATAGACGAA 59.503 33.333 0.00 0.00 0.00 3.85
4230 4405 7.797123 CCTAAAGAAACACAAACATAGACGAAC 59.203 37.037 0.00 0.00 0.00 3.95
4231 4406 6.920569 AAGAAACACAAACATAGACGAACT 57.079 33.333 0.00 0.00 0.00 3.01
4232 4407 8.428186 AAAGAAACACAAACATAGACGAACTA 57.572 30.769 0.00 0.00 35.42 2.24
4233 4408 7.404139 AGAAACACAAACATAGACGAACTAC 57.596 36.000 0.00 0.00 33.62 2.73
4235 4410 5.112220 ACACAAACATAGACGAACTACGA 57.888 39.130 0.00 0.00 45.77 3.43
4236 4411 4.913924 ACACAAACATAGACGAACTACGAC 59.086 41.667 0.00 0.00 45.77 4.34
4237 4412 4.322804 CACAAACATAGACGAACTACGACC 59.677 45.833 0.00 0.00 45.77 4.79
4238 4413 4.022935 ACAAACATAGACGAACTACGACCA 60.023 41.667 0.00 0.00 45.77 4.02
4239 4414 4.352600 AACATAGACGAACTACGACCAG 57.647 45.455 0.00 0.00 45.77 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
143 144 0.404040 CTAGGTTGGCAAGGGGTTCA 59.596 55.000 0.00 0.00 0.00 3.18
241 244 2.925170 ACGAGGCAGACAAGGGCT 60.925 61.111 0.00 0.00 44.69 5.19
246 249 3.089284 TCATAGAAGACGAGGCAGACAA 58.911 45.455 0.00 0.00 0.00 3.18
264 268 4.141251 ACGCTCCCATAACCCTAAATTCAT 60.141 41.667 0.00 0.00 0.00 2.57
269 273 1.210967 CCACGCTCCCATAACCCTAAA 59.789 52.381 0.00 0.00 0.00 1.85
276 280 0.468226 GATCCACCACGCTCCCATAA 59.532 55.000 0.00 0.00 0.00 1.90
378 387 1.722034 TCTTCAGAGAGCCACCAACT 58.278 50.000 0.00 0.00 0.00 3.16
380 389 2.259917 TCATCTTCAGAGAGCCACCAA 58.740 47.619 0.00 0.00 34.85 3.67
405 418 1.609072 GATGCTAGGCGGGAAAAATCC 59.391 52.381 0.00 0.00 0.00 3.01
410 423 2.915869 GGGATGCTAGGCGGGAAA 59.084 61.111 0.00 0.00 0.00 3.13
429 442 0.392998 CGCTAGAAGCACCACCCAAT 60.393 55.000 0.00 0.00 42.58 3.16
432 445 0.179108 CTACGCTAGAAGCACCACCC 60.179 60.000 0.00 0.00 42.58 4.61
471 484 1.655329 GCGAGATCCCCGTAGACAG 59.345 63.158 6.92 0.00 0.00 3.51
496 510 3.378339 CACTTAAGACAAACGTCGACCT 58.622 45.455 10.09 0.00 38.51 3.85
502 516 4.062991 GTGGATCCACTTAAGACAAACGT 58.937 43.478 33.47 0.00 43.12 3.99
514 528 0.175760 CGGATTCACGTGGATCCACT 59.824 55.000 41.42 22.94 44.16 4.00
548 576 2.545952 CGGGAATATCCAACCTGTCGAG 60.546 54.545 0.00 0.00 38.64 4.04
571 600 1.785518 CGCCGTTGAAAAGATGCGTAC 60.786 52.381 0.00 0.00 34.74 3.67
672 702 0.179936 CCCCTCCTTCACTGATGCTC 59.820 60.000 0.00 0.00 0.00 4.26
737 767 1.930656 AATCAGGACCACCCAGGGG 60.931 63.158 11.37 6.87 43.89 4.79
770 853 6.200878 TCTTCTTGGGTAAACCTTCTCATT 57.799 37.500 0.00 0.00 41.11 2.57
773 856 5.866207 TCTTCTTCTTGGGTAAACCTTCTC 58.134 41.667 0.00 0.00 41.11 2.87
840 923 5.051153 GGTTTCAAAAATAGCAAACGGGAA 58.949 37.500 0.00 0.00 30.79 3.97
861 948 4.848357 CTGAATTCCAGGAACATGTAGGT 58.152 43.478 3.18 0.00 39.23 3.08
937 1024 0.595095 GGAAATGGCGATGGATCAGC 59.405 55.000 0.00 0.00 0.00 4.26
1378 1479 4.336581 CGTTGACGGCAAGAGACA 57.663 55.556 2.40 0.00 34.01 3.41
1403 1513 1.256376 CAGCGACGAATCAGAAATCCG 59.744 52.381 0.00 0.00 0.00 4.18
1565 1675 1.908066 GCAGTCGGGGTGCGTAAAAG 61.908 60.000 0.00 0.00 0.00 2.27
1580 1690 2.093500 TGTAGGCATTTGATCGAGCAGT 60.093 45.455 2.57 0.00 0.00 4.40
1599 1709 6.829849 ACCAATCCACAATTTGATTTCTTGT 58.170 32.000 2.79 0.00 33.55 3.16
1620 1731 2.507058 AGATCAGAGGCAGCATTAACCA 59.493 45.455 0.00 0.00 0.00 3.67
1621 1732 3.205784 AGATCAGAGGCAGCATTAACC 57.794 47.619 0.00 0.00 0.00 2.85
1646 1757 2.729491 GCACGCTTTTGCCGTTCC 60.729 61.111 0.00 0.00 43.93 3.62
1647 1758 2.010817 CTGCACGCTTTTGCCGTTC 61.011 57.895 0.01 0.00 42.25 3.95
1755 1866 1.913762 CCGGTCCTCCTTGTCCTGT 60.914 63.158 0.00 0.00 0.00 4.00
1794 1905 4.722700 TTCTTGGCCAGCCGCTCC 62.723 66.667 5.11 0.00 39.42 4.70
1926 2037 3.565482 CAGCAACTTCCTTGAGCTTGTTA 59.435 43.478 0.00 0.00 32.35 2.41
2507 2627 3.457234 GATGCCATCACTGTCAACGATA 58.543 45.455 0.00 0.00 0.00 2.92
2543 2663 0.554305 TATCCGGGTACAGCAGGAGA 59.446 55.000 0.00 0.00 36.08 3.71
2561 2681 2.416836 CGCGTTGTCCTGGATCTTCTTA 60.417 50.000 0.00 0.00 0.00 2.10
2705 2825 2.175811 CTAAACAGCGTTGCGGCC 59.824 61.111 0.00 0.00 0.00 6.13
2711 2831 0.107831 TGGACAGGCTAAACAGCGTT 59.892 50.000 0.00 0.00 35.24 4.84
2712 2832 0.324943 ATGGACAGGCTAAACAGCGT 59.675 50.000 0.00 0.00 35.24 5.07
2799 2919 1.348036 CTTCCCCCTAATCGTCCCATC 59.652 57.143 0.00 0.00 0.00 3.51
2810 2930 2.706190 GCTAGCATCTTTCTTCCCCCTA 59.294 50.000 10.63 0.00 0.00 3.53
2846 2966 5.164620 TGTTCTGGTGATTCAGCAATAGA 57.835 39.130 18.34 10.36 41.37 1.98
2900 3020 3.633525 TGTCAAGAATTTTGAGCAGCACT 59.366 39.130 0.00 0.00 0.00 4.40
2918 3038 0.746204 TGCCAAGCTTCGTGTTGTCA 60.746 50.000 0.00 0.00 0.00 3.58
3056 3176 0.663153 GCGCACACTCCTTGTTCTTT 59.337 50.000 0.30 0.00 35.67 2.52
3131 3251 4.649705 TCCTGGAGGCCGAACCCA 62.650 66.667 12.67 10.58 40.58 4.51
3146 3266 1.064654 GCAATTTCCGTGAGATGCTCC 59.935 52.381 0.00 0.00 0.00 4.70
3207 3327 2.165167 CTTCTGGGCAAGCTGAATCAA 58.835 47.619 0.00 0.00 0.00 2.57
3231 3351 7.307632 CGGTGCATAATTCTTCTTCTAGGATTG 60.308 40.741 0.00 0.00 0.00 2.67
3236 3356 5.235186 CCACGGTGCATAATTCTTCTTCTAG 59.765 44.000 1.68 0.00 0.00 2.43
3268 3388 0.445436 GAGCTGCGTTCATCAAGTGG 59.555 55.000 0.00 0.00 0.00 4.00
3270 3390 0.038251 TCGAGCTGCGTTCATCAAGT 60.038 50.000 0.00 0.00 41.80 3.16
3272 3392 1.194547 GTTTCGAGCTGCGTTCATCAA 59.805 47.619 0.00 0.00 41.80 2.57
3273 3393 0.790207 GTTTCGAGCTGCGTTCATCA 59.210 50.000 0.00 0.00 41.80 3.07
3274 3394 1.071605 AGTTTCGAGCTGCGTTCATC 58.928 50.000 0.00 0.00 41.80 2.92
3275 3395 1.512926 AAGTTTCGAGCTGCGTTCAT 58.487 45.000 0.00 0.00 41.80 2.57
3276 3396 2.143008 TAAGTTTCGAGCTGCGTTCA 57.857 45.000 0.00 0.00 41.80 3.18
3277 3397 2.411160 GGTTAAGTTTCGAGCTGCGTTC 60.411 50.000 0.00 0.00 41.80 3.95
3278 3398 1.529865 GGTTAAGTTTCGAGCTGCGTT 59.470 47.619 0.00 0.00 41.80 4.84
3279 3399 1.145803 GGTTAAGTTTCGAGCTGCGT 58.854 50.000 0.00 0.00 41.80 5.24
3280 3400 1.144969 TGGTTAAGTTTCGAGCTGCG 58.855 50.000 0.00 0.00 42.69 5.18
3281 3401 3.492313 CATTGGTTAAGTTTCGAGCTGC 58.508 45.455 0.00 0.00 0.00 5.25
3282 3402 3.502211 ACCATTGGTTAAGTTTCGAGCTG 59.498 43.478 1.37 0.00 27.29 4.24
3283 3403 3.751518 ACCATTGGTTAAGTTTCGAGCT 58.248 40.909 1.37 0.00 27.29 4.09
3284 3404 4.499037 AACCATTGGTTAAGTTTCGAGC 57.501 40.909 19.53 0.00 44.94 5.03
3288 3408 5.236263 CAGGCAAAACCATTGGTTAAGTTTC 59.764 40.000 21.10 6.99 46.20 2.78
3290 3410 4.407296 TCAGGCAAAACCATTGGTTAAGTT 59.593 37.500 21.10 9.58 46.20 2.66
3294 3414 5.777732 ACTATTCAGGCAAAACCATTGGTTA 59.222 36.000 21.10 3.77 46.20 2.85
3297 3417 4.021192 ACACTATTCAGGCAAAACCATTGG 60.021 41.667 0.00 0.00 43.14 3.16
3310 3430 7.824289 TCTCTTTCCATTACCAACACTATTCAG 59.176 37.037 0.00 0.00 0.00 3.02
3316 3436 5.014123 TCCATCTCTTTCCATTACCAACACT 59.986 40.000 0.00 0.00 0.00 3.55
3317 3437 5.253330 TCCATCTCTTTCCATTACCAACAC 58.747 41.667 0.00 0.00 0.00 3.32
3318 3438 5.250543 TCTCCATCTCTTTCCATTACCAACA 59.749 40.000 0.00 0.00 0.00 3.33
3319 3439 5.745227 TCTCCATCTCTTTCCATTACCAAC 58.255 41.667 0.00 0.00 0.00 3.77
3325 3445 4.226846 TGCTCTTCTCCATCTCTTTCCATT 59.773 41.667 0.00 0.00 0.00 3.16
3326 3446 3.779183 TGCTCTTCTCCATCTCTTTCCAT 59.221 43.478 0.00 0.00 0.00 3.41
3341 3461 3.444916 CCATCAATGTGCATTGCTCTTC 58.555 45.455 17.36 0.00 45.77 2.87
3352 3472 4.434545 AGATTCTCCTCCCATCAATGTG 57.565 45.455 0.00 0.00 0.00 3.21
3354 3474 5.557576 TGTAGATTCTCCTCCCATCAATG 57.442 43.478 0.00 0.00 0.00 2.82
3356 3476 6.624297 TCTATGTAGATTCTCCTCCCATCAA 58.376 40.000 0.00 0.00 0.00 2.57
3360 3480 5.336945 CCATCTATGTAGATTCTCCTCCCA 58.663 45.833 0.00 0.00 40.91 4.37
3361 3481 4.161377 GCCATCTATGTAGATTCTCCTCCC 59.839 50.000 0.00 0.00 40.91 4.30
3365 3485 5.244851 TGACAGCCATCTATGTAGATTCTCC 59.755 44.000 0.00 0.00 40.91 3.71
3393 3514 7.334858 ACCATCTTCATTCCTCTTAGAAACTC 58.665 38.462 0.00 0.00 0.00 3.01
3405 3526 6.823689 ACTTGTGTATGTACCATCTTCATTCC 59.176 38.462 0.00 0.00 0.00 3.01
3413 3534 8.268850 AGATTTTCACTTGTGTATGTACCATC 57.731 34.615 0.46 0.00 0.00 3.51
3415 3536 7.387673 CAGAGATTTTCACTTGTGTATGTACCA 59.612 37.037 0.46 0.00 0.00 3.25
3416 3537 7.602644 TCAGAGATTTTCACTTGTGTATGTACC 59.397 37.037 0.46 0.00 0.00 3.34
3426 3551 9.956720 AAATTAACTGTCAGAGATTTTCACTTG 57.043 29.630 6.91 0.00 0.00 3.16
3437 3563 7.017645 CCGATGAACAAAATTAACTGTCAGAG 58.982 38.462 6.91 0.00 0.00 3.35
3439 3565 6.668323 ACCGATGAACAAAATTAACTGTCAG 58.332 36.000 0.00 0.00 0.00 3.51
3460 3586 4.515191 TCATTTCTTCCAGTTCTTCAACCG 59.485 41.667 0.00 0.00 32.22 4.44
3462 3588 6.263168 TCCTTCATTTCTTCCAGTTCTTCAAC 59.737 38.462 0.00 0.00 0.00 3.18
3467 3593 5.310409 TGTCCTTCATTTCTTCCAGTTCT 57.690 39.130 0.00 0.00 0.00 3.01
3501 3635 9.086336 ACGAAATTTCAATGCCAATAAATAGTG 57.914 29.630 17.99 0.00 0.00 2.74
3502 3636 9.651913 AACGAAATTTCAATGCCAATAAATAGT 57.348 25.926 17.99 0.00 0.00 2.12
3503 3637 9.904647 CAACGAAATTTCAATGCCAATAAATAG 57.095 29.630 17.99 0.00 0.00 1.73
3509 3645 6.928492 ACTTACAACGAAATTTCAATGCCAAT 59.072 30.769 17.99 3.43 0.00 3.16
3561 3699 8.095452 ACTTCCCTAGAGAAATATCAACACAT 57.905 34.615 0.00 0.00 0.00 3.21
3578 3716 8.660295 TCAGTAGTTTCAGAATTACTTCCCTA 57.340 34.615 5.51 0.00 36.50 3.53
3579 3717 7.554959 TCAGTAGTTTCAGAATTACTTCCCT 57.445 36.000 5.51 0.00 36.50 4.20
3614 3756 0.468226 TTTTGCCGAGTCCACTGTCT 59.532 50.000 0.00 0.00 0.00 3.41
3667 3809 3.375299 GCCACTTCGATCATAAAGCAACT 59.625 43.478 0.00 0.00 0.00 3.16
3677 3819 2.290260 ACCTCAAATGCCACTTCGATCA 60.290 45.455 0.00 0.00 0.00 2.92
3679 3821 2.489329 CAACCTCAAATGCCACTTCGAT 59.511 45.455 0.00 0.00 0.00 3.59
3694 3836 3.279434 CCATGCCTAGTAAACCAACCTC 58.721 50.000 0.00 0.00 0.00 3.85
3742 3884 2.490991 ACTCGTTTGTTCAAGCCCTAC 58.509 47.619 0.00 0.00 0.00 3.18
3772 3914 7.208225 AGCATCTCTTGTAAGTTCTTTTTCC 57.792 36.000 0.00 0.00 0.00 3.13
3789 3931 3.072944 GGCCATCACAGATAAGCATCTC 58.927 50.000 0.00 0.00 39.62 2.75
3824 3999 1.457346 CCGAAGCATCAAGGAAGCTT 58.543 50.000 8.26 8.26 46.83 3.74
3825 4000 0.393537 CCCGAAGCATCAAGGAAGCT 60.394 55.000 0.00 0.00 38.27 3.74
3826 4001 1.379642 CCCCGAAGCATCAAGGAAGC 61.380 60.000 0.00 0.00 0.00 3.86
3827 4002 1.379642 GCCCCGAAGCATCAAGGAAG 61.380 60.000 0.00 0.00 0.00 3.46
3828 4003 1.378514 GCCCCGAAGCATCAAGGAA 60.379 57.895 0.00 0.00 0.00 3.36
3829 4004 2.257409 GAGCCCCGAAGCATCAAGGA 62.257 60.000 0.00 0.00 34.23 3.36
3830 4005 1.821332 GAGCCCCGAAGCATCAAGG 60.821 63.158 0.00 0.00 34.23 3.61
3831 4006 0.465705 TAGAGCCCCGAAGCATCAAG 59.534 55.000 0.00 0.00 34.23 3.02
3832 4007 0.178068 GTAGAGCCCCGAAGCATCAA 59.822 55.000 0.00 0.00 34.23 2.57
3833 4008 0.975556 TGTAGAGCCCCGAAGCATCA 60.976 55.000 0.00 0.00 34.23 3.07
3834 4009 0.394565 ATGTAGAGCCCCGAAGCATC 59.605 55.000 0.00 0.00 34.23 3.91
3835 4010 0.394565 GATGTAGAGCCCCGAAGCAT 59.605 55.000 0.00 0.00 34.23 3.79
3836 4011 1.686325 GGATGTAGAGCCCCGAAGCA 61.686 60.000 0.00 0.00 34.23 3.91
3837 4012 1.069935 GGATGTAGAGCCCCGAAGC 59.930 63.158 0.00 0.00 0.00 3.86
3838 4013 1.749033 GGGATGTAGAGCCCCGAAG 59.251 63.158 0.55 0.00 42.75 3.79
3839 4014 3.965660 GGGATGTAGAGCCCCGAA 58.034 61.111 0.55 0.00 42.75 4.30
3844 4019 1.322442 GGCATTTGGGATGTAGAGCC 58.678 55.000 0.00 0.00 0.00 4.70
3845 4020 1.322442 GGGCATTTGGGATGTAGAGC 58.678 55.000 0.00 0.00 0.00 4.09
3846 4021 2.689983 GTTGGGCATTTGGGATGTAGAG 59.310 50.000 0.00 0.00 0.00 2.43
3847 4022 2.042297 TGTTGGGCATTTGGGATGTAGA 59.958 45.455 0.00 0.00 0.00 2.59
3848 4023 2.455557 TGTTGGGCATTTGGGATGTAG 58.544 47.619 0.00 0.00 0.00 2.74
3849 4024 2.564947 GTTGTTGGGCATTTGGGATGTA 59.435 45.455 0.00 0.00 0.00 2.29
3850 4025 1.347378 GTTGTTGGGCATTTGGGATGT 59.653 47.619 0.00 0.00 0.00 3.06
3851 4026 1.624813 AGTTGTTGGGCATTTGGGATG 59.375 47.619 0.00 0.00 0.00 3.51
3852 4027 1.624813 CAGTTGTTGGGCATTTGGGAT 59.375 47.619 0.00 0.00 0.00 3.85
3853 4028 1.047002 CAGTTGTTGGGCATTTGGGA 58.953 50.000 0.00 0.00 0.00 4.37
3854 4029 0.758123 ACAGTTGTTGGGCATTTGGG 59.242 50.000 0.00 0.00 0.00 4.12
3855 4030 2.627699 AGTACAGTTGTTGGGCATTTGG 59.372 45.455 0.00 0.00 0.00 3.28
3856 4031 5.219633 GTTAGTACAGTTGTTGGGCATTTG 58.780 41.667 0.00 0.00 0.00 2.32
3857 4032 4.890581 TGTTAGTACAGTTGTTGGGCATTT 59.109 37.500 0.00 0.00 0.00 2.32
3858 4033 4.277423 GTGTTAGTACAGTTGTTGGGCATT 59.723 41.667 0.00 0.00 34.24 3.56
3859 4034 3.818773 GTGTTAGTACAGTTGTTGGGCAT 59.181 43.478 0.00 0.00 34.24 4.40
3860 4035 3.207778 GTGTTAGTACAGTTGTTGGGCA 58.792 45.455 0.00 0.00 34.24 5.36
3861 4036 3.002965 GTGTGTTAGTACAGTTGTTGGGC 59.997 47.826 0.00 0.00 34.24 5.36
3862 4037 4.193090 TGTGTGTTAGTACAGTTGTTGGG 58.807 43.478 0.00 0.00 34.24 4.12
3863 4038 5.758296 AGATGTGTGTTAGTACAGTTGTTGG 59.242 40.000 0.00 0.00 34.24 3.77
3864 4039 6.844696 AGATGTGTGTTAGTACAGTTGTTG 57.155 37.500 0.00 0.00 34.24 3.33
3865 4040 7.272978 AGAAGATGTGTGTTAGTACAGTTGTT 58.727 34.615 0.00 0.00 34.24 2.83
3866 4041 6.817184 AGAAGATGTGTGTTAGTACAGTTGT 58.183 36.000 0.00 0.00 34.24 3.32
3867 4042 7.438160 TCAAGAAGATGTGTGTTAGTACAGTTG 59.562 37.037 0.00 0.00 34.24 3.16
3868 4043 7.497595 TCAAGAAGATGTGTGTTAGTACAGTT 58.502 34.615 0.00 0.00 34.24 3.16
3869 4044 7.050970 TCAAGAAGATGTGTGTTAGTACAGT 57.949 36.000 0.00 0.00 34.24 3.55
3870 4045 6.090088 GCTCAAGAAGATGTGTGTTAGTACAG 59.910 42.308 0.00 0.00 34.24 2.74
3871 4046 5.926542 GCTCAAGAAGATGTGTGTTAGTACA 59.073 40.000 0.00 0.00 0.00 2.90
3872 4047 5.926542 TGCTCAAGAAGATGTGTGTTAGTAC 59.073 40.000 0.00 0.00 0.00 2.73
3873 4048 6.096673 TGCTCAAGAAGATGTGTGTTAGTA 57.903 37.500 0.00 0.00 0.00 1.82
3874 4049 4.960938 TGCTCAAGAAGATGTGTGTTAGT 58.039 39.130 0.00 0.00 0.00 2.24
3875 4050 7.601073 TTATGCTCAAGAAGATGTGTGTTAG 57.399 36.000 0.00 0.00 0.00 2.34
3876 4051 6.092670 GCTTATGCTCAAGAAGATGTGTGTTA 59.907 38.462 2.50 0.00 36.03 2.41
3877 4052 5.106396 GCTTATGCTCAAGAAGATGTGTGTT 60.106 40.000 2.50 0.00 36.03 3.32
3878 4053 4.394300 GCTTATGCTCAAGAAGATGTGTGT 59.606 41.667 2.50 0.00 36.03 3.72
3879 4054 4.393990 TGCTTATGCTCAAGAAGATGTGTG 59.606 41.667 1.96 0.00 40.48 3.82
3880 4055 4.582869 TGCTTATGCTCAAGAAGATGTGT 58.417 39.130 1.96 0.00 40.48 3.72
3881 4056 5.752892 ATGCTTATGCTCAAGAAGATGTG 57.247 39.130 1.96 0.00 40.48 3.21
3882 4057 7.451732 AGATATGCTTATGCTCAAGAAGATGT 58.548 34.615 1.96 0.00 40.48 3.06
3883 4058 7.064847 GGAGATATGCTTATGCTCAAGAAGATG 59.935 40.741 14.86 0.00 40.48 2.90
3884 4059 7.104939 GGAGATATGCTTATGCTCAAGAAGAT 58.895 38.462 14.86 0.00 40.48 2.40
3885 4060 6.042437 TGGAGATATGCTTATGCTCAAGAAGA 59.958 38.462 14.86 0.00 40.48 2.87
3886 4061 6.228995 TGGAGATATGCTTATGCTCAAGAAG 58.771 40.000 14.86 0.00 40.48 2.85
3887 4062 6.178607 TGGAGATATGCTTATGCTCAAGAA 57.821 37.500 14.86 0.00 40.48 2.52
3888 4063 5.813513 TGGAGATATGCTTATGCTCAAGA 57.186 39.130 14.86 0.00 40.48 3.02
3889 4064 5.107182 CGTTGGAGATATGCTTATGCTCAAG 60.107 44.000 14.86 0.00 40.48 3.02
3890 4065 4.751600 CGTTGGAGATATGCTTATGCTCAA 59.248 41.667 14.86 6.68 40.48 3.02
3891 4066 4.202253 ACGTTGGAGATATGCTTATGCTCA 60.202 41.667 14.86 0.00 40.48 4.26
3892 4067 4.310769 ACGTTGGAGATATGCTTATGCTC 58.689 43.478 1.96 4.28 40.48 4.26
3893 4068 4.342862 ACGTTGGAGATATGCTTATGCT 57.657 40.909 1.96 0.00 40.48 3.79
3894 4069 4.273480 ACAACGTTGGAGATATGCTTATGC 59.727 41.667 30.34 0.00 40.20 3.14
3895 4070 5.991328 ACAACGTTGGAGATATGCTTATG 57.009 39.130 30.34 2.16 0.00 1.90
3896 4071 8.677148 AATAACAACGTTGGAGATATGCTTAT 57.323 30.769 30.34 18.00 0.00 1.73
3897 4072 8.500753 AAATAACAACGTTGGAGATATGCTTA 57.499 30.769 30.34 16.69 0.00 3.09
3898 4073 7.391148 AAATAACAACGTTGGAGATATGCTT 57.609 32.000 30.34 15.16 0.00 3.91
3899 4074 7.391148 AAAATAACAACGTTGGAGATATGCT 57.609 32.000 30.34 4.84 0.00 3.79
3937 4112 9.017509 GCCATAATTGAAGATGAATAGATTGGA 57.982 33.333 0.00 0.00 0.00 3.53
3938 4113 8.799367 TGCCATAATTGAAGATGAATAGATTGG 58.201 33.333 0.00 0.00 0.00 3.16
3945 4120 9.754382 GTTGTATTGCCATAATTGAAGATGAAT 57.246 29.630 0.00 0.00 0.00 2.57
3946 4121 7.914871 CGTTGTATTGCCATAATTGAAGATGAA 59.085 33.333 0.00 0.00 0.00 2.57
3947 4122 7.281999 TCGTTGTATTGCCATAATTGAAGATGA 59.718 33.333 0.00 0.00 0.00 2.92
3948 4123 7.416817 TCGTTGTATTGCCATAATTGAAGATG 58.583 34.615 0.00 0.00 0.00 2.90
3949 4124 7.566760 TCGTTGTATTGCCATAATTGAAGAT 57.433 32.000 0.00 0.00 0.00 2.40
3950 4125 6.993786 TCGTTGTATTGCCATAATTGAAGA 57.006 33.333 0.00 0.00 0.00 2.87
3951 4126 7.008266 GTGTTCGTTGTATTGCCATAATTGAAG 59.992 37.037 0.00 0.00 0.00 3.02
3952 4127 6.804295 GTGTTCGTTGTATTGCCATAATTGAA 59.196 34.615 0.00 0.00 0.00 2.69
3953 4128 6.318628 GTGTTCGTTGTATTGCCATAATTGA 58.681 36.000 0.00 0.00 0.00 2.57
3954 4129 5.514914 GGTGTTCGTTGTATTGCCATAATTG 59.485 40.000 0.00 0.00 0.00 2.32
3955 4130 5.184096 TGGTGTTCGTTGTATTGCCATAATT 59.816 36.000 0.00 0.00 0.00 1.40
3956 4131 4.702612 TGGTGTTCGTTGTATTGCCATAAT 59.297 37.500 0.00 0.00 0.00 1.28
3957 4132 4.072839 TGGTGTTCGTTGTATTGCCATAA 58.927 39.130 0.00 0.00 0.00 1.90
3958 4133 3.676093 TGGTGTTCGTTGTATTGCCATA 58.324 40.909 0.00 0.00 0.00 2.74
3959 4134 2.487762 CTGGTGTTCGTTGTATTGCCAT 59.512 45.455 0.00 0.00 0.00 4.40
3960 4135 1.876799 CTGGTGTTCGTTGTATTGCCA 59.123 47.619 0.00 0.00 0.00 4.92
3961 4136 2.147958 TCTGGTGTTCGTTGTATTGCC 58.852 47.619 0.00 0.00 0.00 4.52
3962 4137 3.889196 TTCTGGTGTTCGTTGTATTGC 57.111 42.857 0.00 0.00 0.00 3.56
3967 4142 9.974980 ATTTTTATTATTTCTGGTGTTCGTTGT 57.025 25.926 0.00 0.00 0.00 3.32
3986 4161 9.614792 GTCTACAGACCTGGATGTAATTTTTAT 57.385 33.333 0.00 0.00 39.07 1.40
3988 4163 7.923414 GTCTACAGACCTGGATGTAATTTTT 57.077 36.000 0.00 0.00 39.07 1.94
4007 4182 2.652590 AGTCATCGGTAGGTGGTCTAC 58.347 52.381 0.00 0.00 45.78 2.59
4008 4183 3.200605 TGTAGTCATCGGTAGGTGGTCTA 59.799 47.826 0.00 0.00 0.00 2.59
4009 4184 2.025605 TGTAGTCATCGGTAGGTGGTCT 60.026 50.000 0.00 0.00 0.00 3.85
4010 4185 2.372264 TGTAGTCATCGGTAGGTGGTC 58.628 52.381 0.00 0.00 0.00 4.02
4011 4186 2.519771 TGTAGTCATCGGTAGGTGGT 57.480 50.000 0.00 0.00 0.00 4.16
4012 4187 3.056393 TGTTTGTAGTCATCGGTAGGTGG 60.056 47.826 0.00 0.00 0.00 4.61
4013 4188 3.924686 GTGTTTGTAGTCATCGGTAGGTG 59.075 47.826 0.00 0.00 0.00 4.00
4014 4189 3.830755 AGTGTTTGTAGTCATCGGTAGGT 59.169 43.478 0.00 0.00 0.00 3.08
4015 4190 4.082408 TCAGTGTTTGTAGTCATCGGTAGG 60.082 45.833 0.00 0.00 0.00 3.18
4016 4191 5.055642 TCAGTGTTTGTAGTCATCGGTAG 57.944 43.478 0.00 0.00 0.00 3.18
4017 4192 5.456548 TTCAGTGTTTGTAGTCATCGGTA 57.543 39.130 0.00 0.00 0.00 4.02
4018 4193 4.307432 CTTCAGTGTTTGTAGTCATCGGT 58.693 43.478 0.00 0.00 0.00 4.69
4019 4194 3.123621 GCTTCAGTGTTTGTAGTCATCGG 59.876 47.826 0.00 0.00 0.00 4.18
4020 4195 3.181540 CGCTTCAGTGTTTGTAGTCATCG 60.182 47.826 0.00 0.00 0.00 3.84
4021 4196 3.987868 TCGCTTCAGTGTTTGTAGTCATC 59.012 43.478 0.00 0.00 0.00 2.92
4022 4197 3.990092 TCGCTTCAGTGTTTGTAGTCAT 58.010 40.909 0.00 0.00 0.00 3.06
4023 4198 3.381045 CTCGCTTCAGTGTTTGTAGTCA 58.619 45.455 0.00 0.00 0.00 3.41
4024 4199 2.155924 GCTCGCTTCAGTGTTTGTAGTC 59.844 50.000 0.00 0.00 0.00 2.59
4025 4200 2.135933 GCTCGCTTCAGTGTTTGTAGT 58.864 47.619 0.00 0.00 0.00 2.73
4026 4201 1.461127 GGCTCGCTTCAGTGTTTGTAG 59.539 52.381 0.00 0.00 0.00 2.74
4027 4202 1.508632 GGCTCGCTTCAGTGTTTGTA 58.491 50.000 0.00 0.00 0.00 2.41
4028 4203 1.498865 CGGCTCGCTTCAGTGTTTGT 61.499 55.000 0.00 0.00 0.00 2.83
4029 4204 1.205064 CGGCTCGCTTCAGTGTTTG 59.795 57.895 0.00 0.00 0.00 2.93
4030 4205 0.531974 TTCGGCTCGCTTCAGTGTTT 60.532 50.000 0.00 0.00 0.00 2.83
4031 4206 0.946221 CTTCGGCTCGCTTCAGTGTT 60.946 55.000 0.00 0.00 0.00 3.32
4032 4207 1.373497 CTTCGGCTCGCTTCAGTGT 60.373 57.895 0.00 0.00 0.00 3.55
4033 4208 2.097038 CCTTCGGCTCGCTTCAGTG 61.097 63.158 0.00 0.00 0.00 3.66
4034 4209 2.262915 CCTTCGGCTCGCTTCAGT 59.737 61.111 0.00 0.00 0.00 3.41
4035 4210 3.191539 GCCTTCGGCTCGCTTCAG 61.192 66.667 0.00 0.00 46.69 3.02
4059 4234 3.770040 TGGGACGGGCGATGACAG 61.770 66.667 0.00 0.00 0.00 3.51
4060 4235 4.077184 GTGGGACGGGCGATGACA 62.077 66.667 0.00 0.00 0.00 3.58
4061 4236 4.077184 TGTGGGACGGGCGATGAC 62.077 66.667 0.00 0.00 0.00 3.06
4062 4237 4.077184 GTGTGGGACGGGCGATGA 62.077 66.667 0.00 0.00 0.00 2.92
4067 4242 4.394712 CTCTGGTGTGGGACGGGC 62.395 72.222 0.00 0.00 0.00 6.13
4068 4243 4.394712 GCTCTGGTGTGGGACGGG 62.395 72.222 0.00 0.00 0.00 5.28
4069 4244 4.394712 GGCTCTGGTGTGGGACGG 62.395 72.222 0.00 0.00 0.00 4.79
4070 4245 4.742201 CGGCTCTGGTGTGGGACG 62.742 72.222 0.00 0.00 0.00 4.79
4071 4246 4.394712 CCGGCTCTGGTGTGGGAC 62.395 72.222 0.00 0.00 0.00 4.46
4075 4250 4.641645 TTGCCCGGCTCTGGTGTG 62.642 66.667 11.61 0.00 0.00 3.82
4076 4251 3.429372 TTTTGCCCGGCTCTGGTGT 62.429 57.895 11.61 0.00 0.00 4.16
4077 4252 2.597217 TTTTGCCCGGCTCTGGTG 60.597 61.111 11.61 0.00 0.00 4.17
4078 4253 2.597510 GTTTTGCCCGGCTCTGGT 60.598 61.111 11.61 0.00 0.00 4.00
4079 4254 1.903404 AAGTTTTGCCCGGCTCTGG 60.903 57.895 11.61 0.00 0.00 3.86
4080 4255 1.286880 CAAGTTTTGCCCGGCTCTG 59.713 57.895 11.61 0.00 0.00 3.35
4081 4256 0.755327 AACAAGTTTTGCCCGGCTCT 60.755 50.000 11.61 1.30 0.00 4.09
4082 4257 0.597377 CAACAAGTTTTGCCCGGCTC 60.597 55.000 11.61 0.00 0.00 4.70
4083 4258 1.326951 ACAACAAGTTTTGCCCGGCT 61.327 50.000 11.61 0.00 0.00 5.52
4084 4259 0.386113 TACAACAAGTTTTGCCCGGC 59.614 50.000 1.04 1.04 0.00 6.13
4085 4260 1.679153 ACTACAACAAGTTTTGCCCGG 59.321 47.619 0.00 0.00 0.00 5.73
4086 4261 3.810941 TCTACTACAACAAGTTTTGCCCG 59.189 43.478 0.00 0.00 0.00 6.13
4087 4262 4.577283 TGTCTACTACAACAAGTTTTGCCC 59.423 41.667 0.00 0.00 34.29 5.36
4088 4263 5.296035 ACTGTCTACTACAACAAGTTTTGCC 59.704 40.000 0.00 0.00 37.74 4.52
4089 4264 6.359480 ACTGTCTACTACAACAAGTTTTGC 57.641 37.500 0.00 0.00 37.74 3.68
4090 4265 6.292168 CCGACTGTCTACTACAACAAGTTTTG 60.292 42.308 6.21 0.00 37.74 2.44
4091 4266 5.751990 CCGACTGTCTACTACAACAAGTTTT 59.248 40.000 6.21 0.00 37.74 2.43
4092 4267 5.287226 CCGACTGTCTACTACAACAAGTTT 58.713 41.667 6.21 0.00 37.74 2.66
4093 4268 4.261909 CCCGACTGTCTACTACAACAAGTT 60.262 45.833 6.21 0.00 37.74 2.66
4094 4269 3.255149 CCCGACTGTCTACTACAACAAGT 59.745 47.826 6.21 0.00 37.74 3.16
4095 4270 3.504906 TCCCGACTGTCTACTACAACAAG 59.495 47.826 6.21 0.00 37.74 3.16
4096 4271 3.489355 TCCCGACTGTCTACTACAACAA 58.511 45.455 6.21 0.00 37.74 2.83
4097 4272 3.144657 TCCCGACTGTCTACTACAACA 57.855 47.619 6.21 0.00 37.74 3.33
4098 4273 3.505293 ACTTCCCGACTGTCTACTACAAC 59.495 47.826 6.21 0.00 37.74 3.32
4099 4274 3.755378 GACTTCCCGACTGTCTACTACAA 59.245 47.826 6.21 0.00 37.74 2.41
4100 4275 3.341823 GACTTCCCGACTGTCTACTACA 58.658 50.000 6.21 0.00 36.42 2.74
4101 4276 2.351111 CGACTTCCCGACTGTCTACTAC 59.649 54.545 6.21 0.00 0.00 2.73
4102 4277 2.027745 ACGACTTCCCGACTGTCTACTA 60.028 50.000 6.21 0.00 0.00 1.82
4103 4278 1.271271 ACGACTTCCCGACTGTCTACT 60.271 52.381 6.21 0.00 0.00 2.57
4104 4279 1.130186 GACGACTTCCCGACTGTCTAC 59.870 57.143 6.21 0.00 0.00 2.59
4105 4280 1.446907 GACGACTTCCCGACTGTCTA 58.553 55.000 6.21 0.00 0.00 2.59
4106 4281 1.575576 CGACGACTTCCCGACTGTCT 61.576 60.000 6.21 0.00 0.00 3.41
4107 4282 1.154263 CGACGACTTCCCGACTGTC 60.154 63.158 0.00 0.00 0.00 3.51
4108 4283 1.895707 ACGACGACTTCCCGACTGT 60.896 57.895 0.00 0.00 0.00 3.55
4109 4284 1.442184 CACGACGACTTCCCGACTG 60.442 63.158 0.00 0.00 0.00 3.51
4110 4285 2.952245 CACGACGACTTCCCGACT 59.048 61.111 0.00 0.00 0.00 4.18
4111 4286 1.915614 TAGCACGACGACTTCCCGAC 61.916 60.000 0.00 0.00 0.00 4.79
4112 4287 1.236616 TTAGCACGACGACTTCCCGA 61.237 55.000 0.00 0.00 0.00 5.14
4113 4288 0.797249 CTTAGCACGACGACTTCCCG 60.797 60.000 0.00 0.00 0.00 5.14
4114 4289 0.458025 CCTTAGCACGACGACTTCCC 60.458 60.000 0.00 0.00 0.00 3.97
4115 4290 0.243095 ACCTTAGCACGACGACTTCC 59.757 55.000 0.00 0.00 0.00 3.46
4116 4291 1.615502 GACCTTAGCACGACGACTTC 58.384 55.000 0.00 0.00 0.00 3.01
4117 4292 0.243095 GGACCTTAGCACGACGACTT 59.757 55.000 0.00 0.00 0.00 3.01
4118 4293 1.593296 GGGACCTTAGCACGACGACT 61.593 60.000 0.00 0.59 0.00 4.18
4119 4294 1.153881 GGGACCTTAGCACGACGAC 60.154 63.158 0.00 0.00 0.00 4.34
4120 4295 0.968901 ATGGGACCTTAGCACGACGA 60.969 55.000 0.00 0.00 0.00 4.20
4121 4296 0.742505 TATGGGACCTTAGCACGACG 59.257 55.000 0.00 0.00 0.00 5.12
4122 4297 1.068741 CCTATGGGACCTTAGCACGAC 59.931 57.143 5.90 0.00 33.58 4.34
4123 4298 1.063492 TCCTATGGGACCTTAGCACGA 60.063 52.381 0.00 0.00 36.57 4.35
4124 4299 1.410004 TCCTATGGGACCTTAGCACG 58.590 55.000 0.00 0.00 36.57 5.34
4134 4309 1.626356 GCTGTGCTGGTCCTATGGGA 61.626 60.000 0.00 0.00 39.70 4.37
4135 4310 1.153086 GCTGTGCTGGTCCTATGGG 60.153 63.158 0.00 0.00 0.00 4.00
4136 4311 0.463295 CTGCTGTGCTGGTCCTATGG 60.463 60.000 0.00 0.00 0.00 2.74
4137 4312 0.538584 TCTGCTGTGCTGGTCCTATG 59.461 55.000 0.00 0.00 0.00 2.23
4138 4313 1.065854 GTTCTGCTGTGCTGGTCCTAT 60.066 52.381 0.00 0.00 0.00 2.57
4139 4314 0.321671 GTTCTGCTGTGCTGGTCCTA 59.678 55.000 0.00 0.00 0.00 2.94
4140 4315 1.072159 GTTCTGCTGTGCTGGTCCT 59.928 57.895 0.00 0.00 0.00 3.85
4141 4316 1.227943 TGTTCTGCTGTGCTGGTCC 60.228 57.895 0.00 0.00 0.00 4.46
4142 4317 1.849976 GCTGTTCTGCTGTGCTGGTC 61.850 60.000 0.00 0.00 0.00 4.02
4143 4318 1.895707 GCTGTTCTGCTGTGCTGGT 60.896 57.895 0.00 0.00 0.00 4.00
4144 4319 1.449726 TTGCTGTTCTGCTGTGCTGG 61.450 55.000 3.65 0.00 0.00 4.85
4145 4320 0.317603 GTTGCTGTTCTGCTGTGCTG 60.318 55.000 3.65 0.00 0.00 4.41
4146 4321 1.450531 GGTTGCTGTTCTGCTGTGCT 61.451 55.000 3.65 0.00 0.00 4.40
4147 4322 1.008079 GGTTGCTGTTCTGCTGTGC 60.008 57.895 3.65 0.00 0.00 4.57
4148 4323 1.280746 CGGTTGCTGTTCTGCTGTG 59.719 57.895 3.65 0.00 0.00 3.66
4149 4324 2.546494 GCGGTTGCTGTTCTGCTGT 61.546 57.895 3.65 0.00 38.39 4.40
4150 4325 2.253452 GCGGTTGCTGTTCTGCTG 59.747 61.111 3.65 0.00 38.39 4.41
4151 4326 2.980233 GGCGGTTGCTGTTCTGCT 60.980 61.111 3.65 0.00 42.25 4.24
4152 4327 4.389576 CGGCGGTTGCTGTTCTGC 62.390 66.667 0.00 0.00 42.79 4.26
4161 4336 3.864686 CTTCATCGGCGGCGGTTG 61.865 66.667 31.73 26.46 0.00 3.77
4162 4337 4.077184 TCTTCATCGGCGGCGGTT 62.077 61.111 31.73 16.58 0.00 4.44
4163 4338 4.514577 CTCTTCATCGGCGGCGGT 62.515 66.667 31.73 23.77 0.00 5.68
4164 4339 3.133767 TACTCTTCATCGGCGGCGG 62.134 63.158 31.73 16.54 0.00 6.13
4165 4340 1.658717 CTACTCTTCATCGGCGGCG 60.659 63.158 27.15 27.15 0.00 6.46
4166 4341 1.951631 GCTACTCTTCATCGGCGGC 60.952 63.158 7.21 0.00 0.00 6.53
4167 4342 1.658717 CGCTACTCTTCATCGGCGG 60.659 63.158 7.21 0.00 39.12 6.13
4168 4343 0.306840 TACGCTACTCTTCATCGGCG 59.693 55.000 0.00 0.00 46.47 6.46
4169 4344 1.602851 TCTACGCTACTCTTCATCGGC 59.397 52.381 0.00 0.00 0.00 5.54
4170 4345 3.423776 CGATCTACGCTACTCTTCATCGG 60.424 52.174 0.00 0.00 34.51 4.18
4171 4346 3.423776 CCGATCTACGCTACTCTTCATCG 60.424 52.174 0.00 0.00 41.07 3.84
4172 4347 3.499157 ACCGATCTACGCTACTCTTCATC 59.501 47.826 0.00 0.00 41.07 2.92
4173 4348 3.478509 ACCGATCTACGCTACTCTTCAT 58.521 45.455 0.00 0.00 41.07 2.57
4174 4349 2.915349 ACCGATCTACGCTACTCTTCA 58.085 47.619 0.00 0.00 41.07 3.02
4175 4350 4.689812 TCATACCGATCTACGCTACTCTTC 59.310 45.833 0.00 0.00 41.07 2.87
4176 4351 4.639334 TCATACCGATCTACGCTACTCTT 58.361 43.478 0.00 0.00 41.07 2.85
4177 4352 4.268797 TCATACCGATCTACGCTACTCT 57.731 45.455 0.00 0.00 41.07 3.24
4178 4353 5.146482 GATCATACCGATCTACGCTACTC 57.854 47.826 0.00 0.00 46.16 2.59
4189 4364 8.701895 TGTTTCTTTAGGTTAGATCATACCGAT 58.298 33.333 9.76 0.00 39.46 4.18
4190 4365 7.977853 GTGTTTCTTTAGGTTAGATCATACCGA 59.022 37.037 9.76 3.46 39.46 4.69
4191 4366 7.762615 TGTGTTTCTTTAGGTTAGATCATACCG 59.237 37.037 9.76 0.00 39.46 4.02
4192 4367 9.444600 TTGTGTTTCTTTAGGTTAGATCATACC 57.555 33.333 7.91 7.91 34.54 2.73
4195 4370 9.349713 TGTTTGTGTTTCTTTAGGTTAGATCAT 57.650 29.630 0.00 0.00 0.00 2.45
4196 4371 8.740123 TGTTTGTGTTTCTTTAGGTTAGATCA 57.260 30.769 0.00 0.00 0.00 2.92
4201 4376 8.767085 CGTCTATGTTTGTGTTTCTTTAGGTTA 58.233 33.333 0.00 0.00 0.00 2.85
4202 4377 7.496591 TCGTCTATGTTTGTGTTTCTTTAGGTT 59.503 33.333 0.00 0.00 0.00 3.50
4203 4378 6.987992 TCGTCTATGTTTGTGTTTCTTTAGGT 59.012 34.615 0.00 0.00 0.00 3.08
4204 4379 7.416154 TCGTCTATGTTTGTGTTTCTTTAGG 57.584 36.000 0.00 0.00 0.00 2.69
4205 4380 8.548721 AGTTCGTCTATGTTTGTGTTTCTTTAG 58.451 33.333 0.00 0.00 0.00 1.85
4206 4381 8.428186 AGTTCGTCTATGTTTGTGTTTCTTTA 57.572 30.769 0.00 0.00 0.00 1.85
4207 4382 7.316544 AGTTCGTCTATGTTTGTGTTTCTTT 57.683 32.000 0.00 0.00 0.00 2.52
4208 4383 6.920569 AGTTCGTCTATGTTTGTGTTTCTT 57.079 33.333 0.00 0.00 0.00 2.52
4209 4384 6.143438 CGTAGTTCGTCTATGTTTGTGTTTCT 59.857 38.462 0.00 0.00 32.61 2.52
4210 4385 6.142798 TCGTAGTTCGTCTATGTTTGTGTTTC 59.857 38.462 8.53 0.00 40.80 2.78
4211 4386 5.978919 TCGTAGTTCGTCTATGTTTGTGTTT 59.021 36.000 8.53 0.00 40.80 2.83
4212 4387 5.400485 GTCGTAGTTCGTCTATGTTTGTGTT 59.600 40.000 8.53 0.00 40.80 3.32
4213 4388 4.913924 GTCGTAGTTCGTCTATGTTTGTGT 59.086 41.667 8.53 0.00 40.80 3.72
4214 4389 4.322804 GGTCGTAGTTCGTCTATGTTTGTG 59.677 45.833 8.53 0.00 40.80 3.33
4215 4390 4.022935 TGGTCGTAGTTCGTCTATGTTTGT 60.023 41.667 8.53 0.00 40.80 2.83
4216 4391 4.478699 TGGTCGTAGTTCGTCTATGTTTG 58.521 43.478 8.53 0.00 40.80 2.93
4217 4392 4.730657 CTGGTCGTAGTTCGTCTATGTTT 58.269 43.478 8.53 0.00 40.80 2.83
4218 4393 4.352600 CTGGTCGTAGTTCGTCTATGTT 57.647 45.455 8.53 0.00 40.80 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.