Multiple sequence alignment - TraesCS7D01G534500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G534500 chr7D 100.000 6346 0 0 1 6346 627121530 627115185 0.000000e+00 11719
1 TraesCS7D01G534500 chr7D 90.909 242 17 4 5325 5562 627091870 627091630 2.850000e-83 320
2 TraesCS7D01G534500 chr7D 76.562 384 50 18 5553 5915 6820607 6820971 2.350000e-39 174
3 TraesCS7D01G534500 chr7B 92.396 2709 107 46 317 2984 727630315 727632965 0.000000e+00 3770
4 TraesCS7D01G534500 chr7B 92.619 1653 75 25 2981 4593 727633034 727634679 0.000000e+00 2333
5 TraesCS7D01G534500 chr7B 92.958 497 18 10 5070 5555 727634819 727635309 0.000000e+00 708
6 TraesCS7D01G534500 chr7B 93.469 245 10 4 1162 1400 702650390 702650634 6.050000e-95 359
7 TraesCS7D01G534500 chr7B 91.441 222 13 2 1162 1377 598197014 598197235 3.720000e-77 300
8 TraesCS7D01G534500 chr7A 93.598 2546 90 30 318 2815 722602479 722599959 0.000000e+00 3731
9 TraesCS7D01G534500 chr7A 93.750 2432 95 30 3161 5554 722599618 722597206 0.000000e+00 3596
10 TraesCS7D01G534500 chr7A 84.634 807 87 20 5570 6346 11280621 11279822 0.000000e+00 769
11 TraesCS7D01G534500 chr7A 87.973 291 20 1 2875 3165 722599961 722599686 4.740000e-86 329
12 TraesCS7D01G534500 chr4B 88.943 823 56 14 5552 6346 459067619 459068434 0.000000e+00 983
13 TraesCS7D01G534500 chr4B 89.313 786 54 12 5587 6346 646867471 646866690 0.000000e+00 959
14 TraesCS7D01G534500 chr4B 93.277 119 8 0 1282 1400 383647904 383648022 6.540000e-40 176
15 TraesCS7D01G534500 chr4B 90.722 97 1 2 1162 1250 383647819 383647915 8.640000e-24 122
16 TraesCS7D01G534500 chr3B 87.636 825 70 9 5551 6346 605450249 605451070 0.000000e+00 929
17 TraesCS7D01G534500 chr3B 92.437 119 8 1 1282 1400 708013713 708013830 1.090000e-37 169
18 TraesCS7D01G534500 chr3B 90.722 97 1 4 1162 1250 708013628 708013724 8.640000e-24 122
19 TraesCS7D01G534500 chr6D 88.732 781 57 12 5593 6346 6390262 6391038 0.000000e+00 926
20 TraesCS7D01G534500 chr5B 87.841 806 65 14 5569 6346 80605188 80604388 0.000000e+00 915
21 TraesCS7D01G534500 chr5B 87.531 802 68 13 5572 6346 80200703 80199907 0.000000e+00 898
22 TraesCS7D01G534500 chr5B 77.083 528 74 22 5552 6053 7071472 7071978 1.750000e-65 261
23 TraesCS7D01G534500 chr5B 74.205 566 92 30 5543 6077 7302857 7302315 3.020000e-43 187
24 TraesCS7D01G534500 chr5B 76.517 379 49 23 5557 5915 531559539 531559181 3.040000e-38 171
25 TraesCS7D01G534500 chr3A 87.046 826 72 14 5552 6346 584293903 584293082 0.000000e+00 900
26 TraesCS7D01G534500 chr5A 89.121 717 54 14 5646 6346 32742335 32741627 0.000000e+00 870
27 TraesCS7D01G534500 chr2B 85.535 795 74 14 5587 6346 742653960 742653172 0.000000e+00 793
28 TraesCS7D01G534500 chr2B 78.533 559 75 26 5552 6086 763883458 763882921 6.140000e-85 326
29 TraesCS7D01G534500 chr5D 86.102 590 66 8 5770 6346 393763106 393763692 6.990000e-174 621
30 TraesCS7D01G534500 chr6B 87.319 276 21 6 6084 6346 615962395 615962669 2.870000e-78 303
31 TraesCS7D01G534500 chr6B 93.277 119 8 0 1282 1400 704100009 704100127 6.540000e-40 176
32 TraesCS7D01G534500 chr2D 75.047 529 84 26 5552 6053 186640901 186640394 1.080000e-47 202
33 TraesCS7D01G534500 chr3D 76.963 382 51 16 5552 5915 42240564 42240926 3.910000e-42 183
34 TraesCS7D01G534500 chr4A 76.289 388 50 18 5548 5915 590099268 590099633 1.090000e-37 169
35 TraesCS7D01G534500 chr1B 75.654 382 56 17 5552 5915 573393727 573394089 8.520000e-34 156


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G534500 chr7D 627115185 627121530 6345 True 11719.000000 11719 100.000000 1 6346 1 chr7D.!!$R2 6345
1 TraesCS7D01G534500 chr7B 727630315 727635309 4994 False 2270.333333 3770 92.657667 317 5555 3 chr7B.!!$F3 5238
2 TraesCS7D01G534500 chr7A 722597206 722602479 5273 True 2552.000000 3731 91.773667 318 5554 3 chr7A.!!$R2 5236
3 TraesCS7D01G534500 chr7A 11279822 11280621 799 True 769.000000 769 84.634000 5570 6346 1 chr7A.!!$R1 776
4 TraesCS7D01G534500 chr4B 459067619 459068434 815 False 983.000000 983 88.943000 5552 6346 1 chr4B.!!$F1 794
5 TraesCS7D01G534500 chr4B 646866690 646867471 781 True 959.000000 959 89.313000 5587 6346 1 chr4B.!!$R1 759
6 TraesCS7D01G534500 chr3B 605450249 605451070 821 False 929.000000 929 87.636000 5551 6346 1 chr3B.!!$F1 795
7 TraesCS7D01G534500 chr6D 6390262 6391038 776 False 926.000000 926 88.732000 5593 6346 1 chr6D.!!$F1 753
8 TraesCS7D01G534500 chr5B 80604388 80605188 800 True 915.000000 915 87.841000 5569 6346 1 chr5B.!!$R3 777
9 TraesCS7D01G534500 chr5B 80199907 80200703 796 True 898.000000 898 87.531000 5572 6346 1 chr5B.!!$R2 774
10 TraesCS7D01G534500 chr5B 7071472 7071978 506 False 261.000000 261 77.083000 5552 6053 1 chr5B.!!$F1 501
11 TraesCS7D01G534500 chr3A 584293082 584293903 821 True 900.000000 900 87.046000 5552 6346 1 chr3A.!!$R1 794
12 TraesCS7D01G534500 chr5A 32741627 32742335 708 True 870.000000 870 89.121000 5646 6346 1 chr5A.!!$R1 700
13 TraesCS7D01G534500 chr2B 742653172 742653960 788 True 793.000000 793 85.535000 5587 6346 1 chr2B.!!$R1 759
14 TraesCS7D01G534500 chr2B 763882921 763883458 537 True 326.000000 326 78.533000 5552 6086 1 chr2B.!!$R2 534
15 TraesCS7D01G534500 chr5D 393763106 393763692 586 False 621.000000 621 86.102000 5770 6346 1 chr5D.!!$F1 576
16 TraesCS7D01G534500 chr2D 186640394 186640901 507 True 202.000000 202 75.047000 5552 6053 1 chr2D.!!$R1 501

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
120 121 0.103026 CGGATGATCTCTCGGCACAA 59.897 55.000 0.00 0.0 0.00 3.33 F
635 651 0.321653 CCCCTGCACCTACACACTTC 60.322 60.000 0.00 0.0 0.00 3.01 F
814 852 1.209640 GTGAGTCGGTCAGTCGGTC 59.790 63.158 0.00 0.0 35.13 4.79 F
1350 1396 1.237285 CCGTCAAGAAGGGCAAGGTG 61.237 60.000 0.00 0.0 0.00 4.00 F
1923 1969 1.797933 CGAGCTCTTCGTCGGTGTG 60.798 63.158 12.85 0.0 44.27 3.82 F
2722 2782 1.382522 CACACTGAGTGCAAACCTGT 58.617 50.000 13.37 0.0 42.15 4.00 F
4238 4505 0.969149 TTGCTCCAAGCGAAGAGAGA 59.031 50.000 4.37 0.0 46.26 3.10 F
4781 5082 0.032815 GCAGCCTCTATCGAAGGTCC 59.967 60.000 3.65 0.0 0.00 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1743 1789 0.389948 CGGGGTTCTTGAGGAAGTCG 60.390 60.000 0.0 0.0 34.23 4.18 R
1746 1792 0.685097 TGTCGGGGTTCTTGAGGAAG 59.315 55.000 0.0 0.0 34.23 3.46 R
2046 2092 1.403814 TAATGGTCTGCTCCCTCTCG 58.596 55.000 0.0 0.0 0.00 4.04 R
2375 2425 2.761786 ATCCCTTCCACATTCATGGG 57.238 50.000 0.0 0.0 40.49 4.00 R
3807 4070 1.486310 TCTACATCCTTCGCCAATGCT 59.514 47.619 0.0 0.0 34.43 3.79 R
4543 4833 0.253044 CACCACCAGATGACCCGATT 59.747 55.000 0.0 0.0 0.00 3.34 R
5119 5423 0.108472 CTTCTGGCTCGACATCTGCA 60.108 55.000 0.0 0.0 0.00 4.41 R
5842 6188 1.134818 CCTGTGTGATGCGTTAGGCTA 60.135 52.381 0.0 0.0 44.05 3.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.799933 TTCCATTTGCCCTGGTTTGT 58.200 45.000 0.00 0.00 35.19 2.83
20 21 1.799933 TCCATTTGCCCTGGTTTGTT 58.200 45.000 0.00 0.00 35.19 2.83
21 22 1.415659 TCCATTTGCCCTGGTTTGTTG 59.584 47.619 0.00 0.00 35.19 3.33
22 23 1.228533 CATTTGCCCTGGTTTGTTGC 58.771 50.000 0.00 0.00 0.00 4.17
23 24 0.108396 ATTTGCCCTGGTTTGTTGCC 59.892 50.000 0.00 0.00 0.00 4.52
24 25 1.267574 TTTGCCCTGGTTTGTTGCCA 61.268 50.000 0.00 0.00 34.42 4.92
30 31 3.050089 TGGTTTGTTGCCAGGGATC 57.950 52.632 0.00 0.00 0.00 3.36
31 32 0.541764 TGGTTTGTTGCCAGGGATCC 60.542 55.000 1.92 1.92 0.00 3.36
32 33 1.257750 GGTTTGTTGCCAGGGATCCC 61.258 60.000 24.59 24.59 0.00 3.85
33 34 1.304052 TTTGTTGCCAGGGATCCCG 60.304 57.895 25.48 18.90 41.95 5.14
34 35 1.784301 TTTGTTGCCAGGGATCCCGA 61.784 55.000 25.48 7.93 41.95 5.14
35 36 1.784301 TTGTTGCCAGGGATCCCGAA 61.784 55.000 25.48 13.55 41.95 4.30
36 37 1.001393 GTTGCCAGGGATCCCGAAA 60.001 57.895 25.48 14.75 41.95 3.46
37 38 1.032114 GTTGCCAGGGATCCCGAAAG 61.032 60.000 25.48 15.54 41.95 2.62
55 56 6.812879 CGAAAGGACCTTTTTAGTGGTAAT 57.187 37.500 20.47 0.00 36.59 1.89
56 57 6.608610 CGAAAGGACCTTTTTAGTGGTAATG 58.391 40.000 20.47 0.00 36.59 1.90
57 58 6.206048 CGAAAGGACCTTTTTAGTGGTAATGT 59.794 38.462 20.47 0.00 36.59 2.71
58 59 7.255346 CGAAAGGACCTTTTTAGTGGTAATGTT 60.255 37.037 20.47 0.00 36.59 2.71
59 60 7.520451 AAGGACCTTTTTAGTGGTAATGTTC 57.480 36.000 0.00 0.00 36.59 3.18
60 61 6.607019 AGGACCTTTTTAGTGGTAATGTTCA 58.393 36.000 0.00 0.00 36.59 3.18
61 62 7.238710 AGGACCTTTTTAGTGGTAATGTTCAT 58.761 34.615 0.00 0.00 36.59 2.57
62 63 7.728532 AGGACCTTTTTAGTGGTAATGTTCATT 59.271 33.333 3.55 3.55 36.59 2.57
63 64 8.364894 GGACCTTTTTAGTGGTAATGTTCATTT 58.635 33.333 3.36 0.00 36.59 2.32
64 65 9.758651 GACCTTTTTAGTGGTAATGTTCATTTT 57.241 29.630 3.36 0.00 36.59 1.82
65 66 9.758651 ACCTTTTTAGTGGTAATGTTCATTTTC 57.241 29.630 3.36 0.00 34.36 2.29
66 67 8.911662 CCTTTTTAGTGGTAATGTTCATTTTCG 58.088 33.333 3.36 0.00 0.00 3.46
67 68 9.672086 CTTTTTAGTGGTAATGTTCATTTTCGA 57.328 29.630 3.36 0.00 0.00 3.71
68 69 9.453325 TTTTTAGTGGTAATGTTCATTTTCGAC 57.547 29.630 3.36 5.72 0.00 4.20
69 70 5.277601 AGTGGTAATGTTCATTTTCGACG 57.722 39.130 3.36 0.00 0.00 5.12
70 71 4.153475 AGTGGTAATGTTCATTTTCGACGG 59.847 41.667 3.36 0.00 0.00 4.79
71 72 4.152759 GTGGTAATGTTCATTTTCGACGGA 59.847 41.667 3.36 0.00 0.00 4.69
72 73 4.390603 TGGTAATGTTCATTTTCGACGGAG 59.609 41.667 3.36 0.00 0.00 4.63
73 74 3.471495 AATGTTCATTTTCGACGGAGC 57.529 42.857 0.00 0.00 0.00 4.70
74 75 1.872388 TGTTCATTTTCGACGGAGCA 58.128 45.000 0.00 0.00 0.00 4.26
75 76 2.214347 TGTTCATTTTCGACGGAGCAA 58.786 42.857 0.00 0.00 0.00 3.91
76 77 2.223144 TGTTCATTTTCGACGGAGCAAG 59.777 45.455 0.00 0.00 0.00 4.01
77 78 1.438651 TCATTTTCGACGGAGCAAGG 58.561 50.000 0.00 0.00 0.00 3.61
78 79 0.447801 CATTTTCGACGGAGCAAGGG 59.552 55.000 0.00 0.00 0.00 3.95
79 80 0.676782 ATTTTCGACGGAGCAAGGGG 60.677 55.000 0.00 0.00 0.00 4.79
80 81 2.047213 TTTTCGACGGAGCAAGGGGT 62.047 55.000 0.00 0.00 0.00 4.95
81 82 2.444700 TTTCGACGGAGCAAGGGGTC 62.445 60.000 0.00 0.00 40.81 4.46
82 83 3.382832 CGACGGAGCAAGGGGTCT 61.383 66.667 0.00 0.00 41.29 3.85
83 84 2.579738 GACGGAGCAAGGGGTCTC 59.420 66.667 0.00 0.00 41.29 3.36
84 85 3.358076 GACGGAGCAAGGGGTCTCG 62.358 68.421 0.00 0.00 41.29 4.04
85 86 4.148825 CGGAGCAAGGGGTCTCGG 62.149 72.222 0.00 0.00 41.29 4.63
86 87 4.475135 GGAGCAAGGGGTCTCGGC 62.475 72.222 0.00 0.00 41.29 5.54
87 88 3.706373 GAGCAAGGGGTCTCGGCA 61.706 66.667 0.00 0.00 38.50 5.69
88 89 3.959991 GAGCAAGGGGTCTCGGCAC 62.960 68.421 0.00 0.00 38.50 5.01
90 91 3.636231 CAAGGGGTCTCGGCACCA 61.636 66.667 6.10 0.00 38.32 4.17
91 92 2.610859 AAGGGGTCTCGGCACCAT 60.611 61.111 6.10 0.00 38.32 3.55
92 93 1.306654 AAGGGGTCTCGGCACCATA 60.307 57.895 6.10 0.00 38.32 2.74
93 94 0.694444 AAGGGGTCTCGGCACCATAT 60.694 55.000 6.10 0.00 38.32 1.78
94 95 0.694444 AGGGGTCTCGGCACCATATT 60.694 55.000 6.10 0.00 38.32 1.28
95 96 0.250338 GGGGTCTCGGCACCATATTC 60.250 60.000 6.10 0.00 38.32 1.75
96 97 0.250338 GGGTCTCGGCACCATATTCC 60.250 60.000 6.10 0.00 38.32 3.01
97 98 0.468226 GGTCTCGGCACCATATTCCA 59.532 55.000 0.00 0.00 36.32 3.53
98 99 1.134220 GGTCTCGGCACCATATTCCAA 60.134 52.381 0.00 0.00 36.32 3.53
99 100 2.213499 GTCTCGGCACCATATTCCAAG 58.787 52.381 0.00 0.00 0.00 3.61
100 101 0.947244 CTCGGCACCATATTCCAAGC 59.053 55.000 0.00 0.00 0.00 4.01
101 102 0.465460 TCGGCACCATATTCCAAGCC 60.465 55.000 0.00 0.00 38.73 4.35
102 103 2.032981 GGCACCATATTCCAAGCCG 58.967 57.895 0.00 0.00 31.88 5.52
103 104 1.455383 GGCACCATATTCCAAGCCGG 61.455 60.000 0.00 0.00 31.88 6.13
104 105 0.465460 GCACCATATTCCAAGCCGGA 60.465 55.000 5.05 0.00 44.40 5.14
105 106 1.819305 GCACCATATTCCAAGCCGGAT 60.819 52.381 5.05 0.00 45.80 4.18
106 107 1.881973 CACCATATTCCAAGCCGGATG 59.118 52.381 5.05 2.46 45.80 3.51
107 108 1.774254 ACCATATTCCAAGCCGGATGA 59.226 47.619 5.05 0.00 45.80 2.92
108 109 2.376518 ACCATATTCCAAGCCGGATGAT 59.623 45.455 5.05 0.00 45.80 2.45
109 110 3.012518 CCATATTCCAAGCCGGATGATC 58.987 50.000 5.05 0.00 45.80 2.92
110 111 3.307975 CCATATTCCAAGCCGGATGATCT 60.308 47.826 5.05 0.00 45.80 2.75
111 112 2.557920 ATTCCAAGCCGGATGATCTC 57.442 50.000 5.05 0.00 45.80 2.75
112 113 1.500474 TTCCAAGCCGGATGATCTCT 58.500 50.000 5.05 0.00 45.80 3.10
113 114 1.043816 TCCAAGCCGGATGATCTCTC 58.956 55.000 5.05 0.00 39.64 3.20
114 115 0.319383 CCAAGCCGGATGATCTCTCG 60.319 60.000 5.05 0.00 36.56 4.04
115 116 0.319383 CAAGCCGGATGATCTCTCGG 60.319 60.000 5.05 13.94 39.38 4.63
117 118 3.448194 CCGGATGATCTCTCGGCA 58.552 61.111 0.00 0.00 33.11 5.69
118 119 1.006805 CCGGATGATCTCTCGGCAC 60.007 63.158 0.00 0.00 33.11 5.01
119 120 1.735973 CGGATGATCTCTCGGCACA 59.264 57.895 0.00 0.00 0.00 4.57
120 121 0.103026 CGGATGATCTCTCGGCACAA 59.897 55.000 0.00 0.00 0.00 3.33
121 122 1.471501 CGGATGATCTCTCGGCACAAA 60.472 52.381 0.00 0.00 0.00 2.83
122 123 2.632377 GGATGATCTCTCGGCACAAAA 58.368 47.619 0.00 0.00 0.00 2.44
123 124 3.009723 GGATGATCTCTCGGCACAAAAA 58.990 45.455 0.00 0.00 0.00 1.94
124 125 3.181506 GGATGATCTCTCGGCACAAAAAC 60.182 47.826 0.00 0.00 0.00 2.43
125 126 2.844946 TGATCTCTCGGCACAAAAACA 58.155 42.857 0.00 0.00 0.00 2.83
126 127 3.411446 TGATCTCTCGGCACAAAAACAT 58.589 40.909 0.00 0.00 0.00 2.71
127 128 3.189080 TGATCTCTCGGCACAAAAACATG 59.811 43.478 0.00 0.00 0.00 3.21
128 129 2.844946 TCTCTCGGCACAAAAACATGA 58.155 42.857 0.00 0.00 0.00 3.07
129 130 2.548057 TCTCTCGGCACAAAAACATGAC 59.452 45.455 0.00 0.00 0.00 3.06
130 131 1.606668 TCTCGGCACAAAAACATGACC 59.393 47.619 0.00 0.00 0.00 4.02
131 132 1.608590 CTCGGCACAAAAACATGACCT 59.391 47.619 0.00 0.00 0.00 3.85
132 133 2.028130 TCGGCACAAAAACATGACCTT 58.972 42.857 0.00 0.00 0.00 3.50
133 134 2.126467 CGGCACAAAAACATGACCTTG 58.874 47.619 0.00 1.78 0.00 3.61
134 135 2.481104 CGGCACAAAAACATGACCTTGT 60.481 45.455 0.00 2.45 32.31 3.16
135 136 3.243234 CGGCACAAAAACATGACCTTGTA 60.243 43.478 0.00 0.00 31.00 2.41
136 137 4.558496 CGGCACAAAAACATGACCTTGTAT 60.558 41.667 0.00 0.00 31.00 2.29
137 138 5.296748 GGCACAAAAACATGACCTTGTATT 58.703 37.500 0.00 0.00 31.00 1.89
138 139 5.757808 GGCACAAAAACATGACCTTGTATTT 59.242 36.000 0.00 0.00 31.00 1.40
139 140 6.073819 GGCACAAAAACATGACCTTGTATTTC 60.074 38.462 0.00 0.00 31.00 2.17
140 141 6.345723 GCACAAAAACATGACCTTGTATTTCG 60.346 38.462 0.00 0.00 31.00 3.46
141 142 6.915300 CACAAAAACATGACCTTGTATTTCGA 59.085 34.615 0.00 0.00 31.00 3.71
142 143 7.433719 CACAAAAACATGACCTTGTATTTCGAA 59.566 33.333 0.00 0.00 31.00 3.71
143 144 7.647715 ACAAAAACATGACCTTGTATTTCGAAG 59.352 33.333 0.00 0.00 30.41 3.79
144 145 7.504924 AAAACATGACCTTGTATTTCGAAGA 57.495 32.000 0.00 0.00 0.00 2.87
145 146 7.687941 AAACATGACCTTGTATTTCGAAGAT 57.312 32.000 0.00 0.00 35.04 2.40
146 147 8.786826 AAACATGACCTTGTATTTCGAAGATA 57.213 30.769 0.00 0.00 35.04 1.98
147 148 8.786826 AACATGACCTTGTATTTCGAAGATAA 57.213 30.769 0.00 0.00 35.04 1.75
148 149 8.964476 ACATGACCTTGTATTTCGAAGATAAT 57.036 30.769 0.00 0.00 35.04 1.28
149 150 9.046296 ACATGACCTTGTATTTCGAAGATAATC 57.954 33.333 0.00 0.00 35.04 1.75
150 151 7.694388 TGACCTTGTATTTCGAAGATAATCG 57.306 36.000 0.00 0.00 44.04 3.34
151 152 7.262772 TGACCTTGTATTTCGAAGATAATCGT 58.737 34.615 0.00 0.00 43.19 3.73
152 153 7.762615 TGACCTTGTATTTCGAAGATAATCGTT 59.237 33.333 0.00 0.00 43.19 3.85
153 154 7.906160 ACCTTGTATTTCGAAGATAATCGTTG 58.094 34.615 0.00 0.00 43.19 4.10
154 155 6.846283 CCTTGTATTTCGAAGATAATCGTTGC 59.154 38.462 0.00 0.00 43.19 4.17
155 156 6.895607 TGTATTTCGAAGATAATCGTTGCA 57.104 33.333 0.00 0.00 43.19 4.08
156 157 7.477144 TGTATTTCGAAGATAATCGTTGCAT 57.523 32.000 0.00 0.00 43.19 3.96
157 158 7.344441 TGTATTTCGAAGATAATCGTTGCATG 58.656 34.615 0.00 0.00 43.19 4.06
158 159 6.603237 ATTTCGAAGATAATCGTTGCATGA 57.397 33.333 0.00 0.00 43.19 3.07
159 160 5.641777 TTCGAAGATAATCGTTGCATGAG 57.358 39.130 0.00 0.00 43.19 2.90
160 161 4.932146 TCGAAGATAATCGTTGCATGAGA 58.068 39.130 0.00 0.00 43.19 3.27
161 162 5.532557 TCGAAGATAATCGTTGCATGAGAT 58.467 37.500 0.00 0.00 43.19 2.75
162 163 5.985530 TCGAAGATAATCGTTGCATGAGATT 59.014 36.000 13.72 13.72 43.19 2.40
163 164 6.144563 TCGAAGATAATCGTTGCATGAGATTC 59.855 38.462 12.93 3.71 43.19 2.52
164 165 6.074142 CGAAGATAATCGTTGCATGAGATTCA 60.074 38.462 12.93 4.21 38.01 2.57
165 166 7.517259 CGAAGATAATCGTTGCATGAGATTCAA 60.517 37.037 12.93 0.00 38.01 2.69
166 167 7.187244 AGATAATCGTTGCATGAGATTCAAG 57.813 36.000 12.93 0.00 36.23 3.02
167 168 4.627611 AATCGTTGCATGAGATTCAAGG 57.372 40.909 0.00 0.00 29.53 3.61
168 169 1.739466 TCGTTGCATGAGATTCAAGGC 59.261 47.619 0.00 0.00 33.23 4.35
169 170 1.202222 CGTTGCATGAGATTCAAGGCC 60.202 52.381 0.00 0.00 32.11 5.19
170 171 1.820519 GTTGCATGAGATTCAAGGCCA 59.179 47.619 5.01 0.00 32.11 5.36
171 172 1.466856 TGCATGAGATTCAAGGCCAC 58.533 50.000 5.01 0.00 32.11 5.01
172 173 0.379669 GCATGAGATTCAAGGCCACG 59.620 55.000 5.01 0.00 0.00 4.94
173 174 1.742761 CATGAGATTCAAGGCCACGT 58.257 50.000 5.01 0.00 0.00 4.49
174 175 2.086869 CATGAGATTCAAGGCCACGTT 58.913 47.619 5.01 0.00 0.00 3.99
175 176 2.270352 TGAGATTCAAGGCCACGTTT 57.730 45.000 5.01 0.00 0.00 3.60
176 177 2.582052 TGAGATTCAAGGCCACGTTTT 58.418 42.857 5.01 0.00 0.00 2.43
177 178 2.955660 TGAGATTCAAGGCCACGTTTTT 59.044 40.909 5.01 0.00 0.00 1.94
178 179 4.138290 TGAGATTCAAGGCCACGTTTTTA 58.862 39.130 5.01 0.00 0.00 1.52
179 180 4.764823 TGAGATTCAAGGCCACGTTTTTAT 59.235 37.500 5.01 0.00 0.00 1.40
180 181 5.941058 TGAGATTCAAGGCCACGTTTTTATA 59.059 36.000 5.01 0.00 0.00 0.98
181 182 6.431543 TGAGATTCAAGGCCACGTTTTTATAA 59.568 34.615 5.01 0.00 0.00 0.98
182 183 7.122055 TGAGATTCAAGGCCACGTTTTTATAAT 59.878 33.333 5.01 0.00 0.00 1.28
183 184 7.480810 AGATTCAAGGCCACGTTTTTATAATC 58.519 34.615 5.01 2.85 0.00 1.75
184 185 5.224562 TCAAGGCCACGTTTTTATAATCG 57.775 39.130 5.01 0.00 33.72 3.34
185 186 3.685836 AGGCCACGTTTTTATAATCGC 57.314 42.857 5.01 0.00 31.31 4.58
186 187 2.031191 AGGCCACGTTTTTATAATCGCG 59.969 45.455 5.01 0.00 31.31 5.87
187 188 2.223089 GGCCACGTTTTTATAATCGCGT 60.223 45.455 5.77 0.00 31.31 6.01
188 189 2.774074 GCCACGTTTTTATAATCGCGTG 59.226 45.455 19.92 19.92 45.97 5.34
193 194 5.919196 ACGTTTTTATAATCGCGTGAAACT 58.081 33.333 5.77 0.00 31.31 2.66
194 195 6.011277 ACGTTTTTATAATCGCGTGAAACTC 58.989 36.000 5.77 0.00 31.31 3.01
195 196 6.128742 ACGTTTTTATAATCGCGTGAAACTCT 60.129 34.615 5.77 0.00 31.31 3.24
196 197 6.190333 CGTTTTTATAATCGCGTGAAACTCTG 59.810 38.462 5.77 0.00 31.75 3.35
197 198 6.954616 TTTTATAATCGCGTGAAACTCTGA 57.045 33.333 5.77 0.00 31.75 3.27
198 199 6.954616 TTTATAATCGCGTGAAACTCTGAA 57.045 33.333 5.77 0.00 31.75 3.02
199 200 7.534085 TTTATAATCGCGTGAAACTCTGAAT 57.466 32.000 5.77 0.00 31.75 2.57
200 201 3.729526 AATCGCGTGAAACTCTGAATG 57.270 42.857 5.77 0.00 31.75 2.67
201 202 2.148916 TCGCGTGAAACTCTGAATGT 57.851 45.000 5.77 0.00 31.75 2.71
202 203 2.479837 TCGCGTGAAACTCTGAATGTT 58.520 42.857 5.77 0.00 31.75 2.71
203 204 2.475111 TCGCGTGAAACTCTGAATGTTC 59.525 45.455 5.77 0.00 31.75 3.18
204 205 2.476619 CGCGTGAAACTCTGAATGTTCT 59.523 45.455 0.00 0.00 31.75 3.01
205 206 3.059597 CGCGTGAAACTCTGAATGTTCTT 60.060 43.478 0.00 0.00 31.75 2.52
206 207 4.149922 CGCGTGAAACTCTGAATGTTCTTA 59.850 41.667 0.00 0.00 31.75 2.10
207 208 5.612865 GCGTGAAACTCTGAATGTTCTTAG 58.387 41.667 0.00 0.00 31.75 2.18
208 209 5.177696 GCGTGAAACTCTGAATGTTCTTAGT 59.822 40.000 0.00 0.00 31.75 2.24
209 210 6.616682 GCGTGAAACTCTGAATGTTCTTAGTC 60.617 42.308 0.00 0.00 31.75 2.59
210 211 6.420903 CGTGAAACTCTGAATGTTCTTAGTCA 59.579 38.462 0.00 0.00 31.75 3.41
211 212 7.567771 CGTGAAACTCTGAATGTTCTTAGTCAC 60.568 40.741 0.00 0.00 31.75 3.67
212 213 6.420903 TGAAACTCTGAATGTTCTTAGTCACG 59.579 38.462 0.00 0.00 0.00 4.35
213 214 5.707242 ACTCTGAATGTTCTTAGTCACGA 57.293 39.130 0.00 0.00 0.00 4.35
214 215 5.462405 ACTCTGAATGTTCTTAGTCACGAC 58.538 41.667 0.00 0.00 0.00 4.34
215 216 4.806330 TCTGAATGTTCTTAGTCACGACC 58.194 43.478 0.00 0.00 0.00 4.79
216 217 4.279922 TCTGAATGTTCTTAGTCACGACCA 59.720 41.667 0.00 0.00 0.00 4.02
217 218 5.047306 TCTGAATGTTCTTAGTCACGACCAT 60.047 40.000 0.00 0.00 0.00 3.55
218 219 4.929211 TGAATGTTCTTAGTCACGACCATG 59.071 41.667 0.00 0.00 0.00 3.66
219 220 2.683968 TGTTCTTAGTCACGACCATGC 58.316 47.619 0.00 0.00 0.00 4.06
220 221 2.000447 GTTCTTAGTCACGACCATGCC 59.000 52.381 0.00 0.00 0.00 4.40
221 222 1.262417 TCTTAGTCACGACCATGCCA 58.738 50.000 0.00 0.00 0.00 4.92
222 223 1.831106 TCTTAGTCACGACCATGCCAT 59.169 47.619 0.00 0.00 0.00 4.40
223 224 2.236146 TCTTAGTCACGACCATGCCATT 59.764 45.455 0.00 0.00 0.00 3.16
224 225 2.779755 TAGTCACGACCATGCCATTT 57.220 45.000 0.00 0.00 0.00 2.32
225 226 1.909700 AGTCACGACCATGCCATTTT 58.090 45.000 0.00 0.00 0.00 1.82
226 227 2.238521 AGTCACGACCATGCCATTTTT 58.761 42.857 0.00 0.00 0.00 1.94
249 250 8.925161 TTTTTGTGAGAAAAACTTTCGATCAT 57.075 26.923 0.00 0.00 0.00 2.45
250 251 7.912949 TTTGTGAGAAAAACTTTCGATCATG 57.087 32.000 0.00 0.00 0.00 3.07
251 252 6.000891 TGTGAGAAAAACTTTCGATCATGG 57.999 37.500 0.00 0.00 0.00 3.66
252 253 5.530915 TGTGAGAAAAACTTTCGATCATGGT 59.469 36.000 0.00 0.00 0.00 3.55
253 254 5.853282 GTGAGAAAAACTTTCGATCATGGTG 59.147 40.000 0.00 0.00 0.00 4.17
254 255 5.530915 TGAGAAAAACTTTCGATCATGGTGT 59.469 36.000 0.00 0.00 0.00 4.16
255 256 6.708502 TGAGAAAAACTTTCGATCATGGTGTA 59.291 34.615 0.00 0.00 0.00 2.90
256 257 6.899114 AGAAAAACTTTCGATCATGGTGTAC 58.101 36.000 0.00 0.00 0.00 2.90
257 258 6.485313 AGAAAAACTTTCGATCATGGTGTACA 59.515 34.615 0.00 0.00 0.00 2.90
258 259 6.817765 AAAACTTTCGATCATGGTGTACAT 57.182 33.333 0.00 0.00 41.57 2.29
259 260 7.915293 AAAACTTTCGATCATGGTGTACATA 57.085 32.000 0.00 0.00 37.84 2.29
260 261 7.539712 AAACTTTCGATCATGGTGTACATAG 57.460 36.000 0.00 0.00 37.84 2.23
261 262 5.050490 ACTTTCGATCATGGTGTACATAGC 58.950 41.667 0.00 0.00 37.84 2.97
262 263 4.937201 TTCGATCATGGTGTACATAGCT 57.063 40.909 0.00 0.00 37.84 3.32
263 264 6.040504 ACTTTCGATCATGGTGTACATAGCTA 59.959 38.462 0.00 0.00 37.84 3.32
264 265 6.399639 TTCGATCATGGTGTACATAGCTAA 57.600 37.500 0.00 0.00 37.84 3.09
265 266 6.399639 TCGATCATGGTGTACATAGCTAAA 57.600 37.500 0.00 0.00 37.84 1.85
266 267 6.993079 TCGATCATGGTGTACATAGCTAAAT 58.007 36.000 0.00 0.00 37.84 1.40
267 268 8.117813 TCGATCATGGTGTACATAGCTAAATA 57.882 34.615 0.00 0.00 37.84 1.40
268 269 8.581578 TCGATCATGGTGTACATAGCTAAATAA 58.418 33.333 0.00 0.00 37.84 1.40
269 270 9.203421 CGATCATGGTGTACATAGCTAAATAAA 57.797 33.333 0.00 0.00 37.84 1.40
271 272 9.845740 ATCATGGTGTACATAGCTAAATAAACA 57.154 29.630 0.00 0.00 37.84 2.83
272 273 9.674068 TCATGGTGTACATAGCTAAATAAACAA 57.326 29.630 0.00 0.00 37.84 2.83
275 276 8.732531 TGGTGTACATAGCTAAATAAACAAACC 58.267 33.333 0.00 0.00 0.00 3.27
276 277 8.732531 GGTGTACATAGCTAAATAAACAAACCA 58.267 33.333 0.00 0.00 0.00 3.67
280 281 8.702163 ACATAGCTAAATAAACAAACCATTGC 57.298 30.769 0.00 0.00 40.34 3.56
281 282 8.531146 ACATAGCTAAATAAACAAACCATTGCT 58.469 29.630 0.00 0.00 40.34 3.91
282 283 9.023967 CATAGCTAAATAAACAAACCATTGCTC 57.976 33.333 0.00 0.00 40.34 4.26
283 284 6.991938 AGCTAAATAAACAAACCATTGCTCA 58.008 32.000 0.00 0.00 40.34 4.26
284 285 7.441017 AGCTAAATAAACAAACCATTGCTCAA 58.559 30.769 0.00 0.00 40.34 3.02
285 286 7.599998 AGCTAAATAAACAAACCATTGCTCAAG 59.400 33.333 0.00 0.00 40.34 3.02
286 287 6.544038 AAATAAACAAACCATTGCTCAAGC 57.456 33.333 0.00 0.00 40.34 4.01
287 288 3.825143 AAACAAACCATTGCTCAAGCT 57.175 38.095 3.32 0.00 40.34 3.74
288 289 3.825143 AACAAACCATTGCTCAAGCTT 57.175 38.095 3.32 0.00 40.34 3.74
289 290 3.102052 ACAAACCATTGCTCAAGCTTG 57.898 42.857 20.81 20.81 40.34 4.01
290 291 2.224113 ACAAACCATTGCTCAAGCTTGG 60.224 45.455 25.73 17.00 44.76 3.61
291 292 3.444850 ACCATTGCTCAAGCTTGGT 57.555 47.368 25.73 18.51 46.10 3.67
293 294 1.250328 CCATTGCTCAAGCTTGGTCA 58.750 50.000 25.73 19.48 42.66 4.02
294 295 1.614903 CCATTGCTCAAGCTTGGTCAA 59.385 47.619 25.73 25.49 42.66 3.18
295 296 2.232941 CCATTGCTCAAGCTTGGTCAAT 59.767 45.455 26.72 26.72 42.66 2.57
296 297 3.444742 CCATTGCTCAAGCTTGGTCAATA 59.555 43.478 29.25 15.88 42.66 1.90
297 298 4.098960 CCATTGCTCAAGCTTGGTCAATAT 59.901 41.667 29.25 17.39 42.66 1.28
298 299 4.707030 TTGCTCAAGCTTGGTCAATATG 57.293 40.909 25.73 7.67 42.66 1.78
299 300 3.954200 TGCTCAAGCTTGGTCAATATGA 58.046 40.909 25.73 2.61 42.66 2.15
300 301 4.529897 TGCTCAAGCTTGGTCAATATGAT 58.470 39.130 25.73 0.00 42.66 2.45
301 302 4.337274 TGCTCAAGCTTGGTCAATATGATG 59.663 41.667 25.73 0.00 42.66 3.07
302 303 4.337555 GCTCAAGCTTGGTCAATATGATGT 59.662 41.667 25.73 0.00 38.21 3.06
303 304 5.528690 GCTCAAGCTTGGTCAATATGATGTA 59.471 40.000 25.73 0.67 38.21 2.29
304 305 6.038603 GCTCAAGCTTGGTCAATATGATGTAA 59.961 38.462 25.73 0.00 38.21 2.41
305 306 7.415541 GCTCAAGCTTGGTCAATATGATGTAAA 60.416 37.037 25.73 0.00 38.21 2.01
306 307 7.988737 TCAAGCTTGGTCAATATGATGTAAAG 58.011 34.615 25.73 0.00 0.00 1.85
307 308 7.828717 TCAAGCTTGGTCAATATGATGTAAAGA 59.171 33.333 25.73 0.00 0.00 2.52
308 309 8.461222 CAAGCTTGGTCAATATGATGTAAAGAA 58.539 33.333 19.14 0.00 0.00 2.52
309 310 8.757982 AGCTTGGTCAATATGATGTAAAGAAT 57.242 30.769 0.00 0.00 0.00 2.40
310 311 9.851686 AGCTTGGTCAATATGATGTAAAGAATA 57.148 29.630 0.00 0.00 0.00 1.75
313 314 9.625747 TTGGTCAATATGATGTAAAGAATAGCA 57.374 29.630 0.00 0.00 0.00 3.49
314 315 9.625747 TGGTCAATATGATGTAAAGAATAGCAA 57.374 29.630 0.00 0.00 0.00 3.91
340 341 6.804534 TTGCTAAACATTGACGACAAAAAG 57.195 33.333 4.09 0.91 39.54 2.27
356 357 6.142320 CGACAAAAAGGAAAAGAATGCTACAC 59.858 38.462 0.00 0.00 0.00 2.90
359 360 4.749245 AAGGAAAAGAATGCTACACGTG 57.251 40.909 15.48 15.48 0.00 4.49
364 368 5.625311 GGAAAAGAATGCTACACGTGAAAAG 59.375 40.000 25.01 16.64 0.00 2.27
365 369 6.371809 AAAAGAATGCTACACGTGAAAAGA 57.628 33.333 25.01 1.84 0.00 2.52
372 376 3.562557 GCTACACGTGAAAAGAGGGAAAA 59.437 43.478 25.01 0.00 0.00 2.29
375 379 3.759618 ACACGTGAAAAGAGGGAAAAACA 59.240 39.130 25.01 0.00 0.00 2.83
376 380 4.218852 ACACGTGAAAAGAGGGAAAAACAA 59.781 37.500 25.01 0.00 0.00 2.83
393 397 2.921221 ACAAATGGAGAGAGGGGAGAA 58.079 47.619 0.00 0.00 0.00 2.87
396 400 3.498614 AATGGAGAGAGGGGAGAAAGA 57.501 47.619 0.00 0.00 0.00 2.52
411 421 6.385843 GGGAGAAAGAAAAAGAAGATCTTGC 58.614 40.000 14.00 4.79 36.71 4.01
524 536 2.025226 TCACACAAACTACCAAACCCCA 60.025 45.455 0.00 0.00 0.00 4.96
598 614 2.070262 TCACAAGTGAGCAGATGTCG 57.930 50.000 0.00 0.00 34.14 4.35
599 615 1.073964 CACAAGTGAGCAGATGTCGG 58.926 55.000 0.00 0.00 0.00 4.79
600 616 0.681733 ACAAGTGAGCAGATGTCGGT 59.318 50.000 0.00 0.00 0.00 4.69
601 617 1.893137 ACAAGTGAGCAGATGTCGGTA 59.107 47.619 0.00 0.00 0.00 4.02
602 618 2.263077 CAAGTGAGCAGATGTCGGTAC 58.737 52.381 0.00 0.00 0.00 3.34
635 651 0.321653 CCCCTGCACCTACACACTTC 60.322 60.000 0.00 0.00 0.00 3.01
708 729 5.221880 TCTTGTCATGCTTAATTGCACAAC 58.778 37.500 0.00 0.00 46.33 3.32
715 743 4.548494 TGCTTAATTGCACAACACATGAG 58.452 39.130 0.00 0.00 38.12 2.90
735 763 5.976458 TGAGCAATTATCATTTTGTTCCCC 58.024 37.500 0.00 0.00 33.64 4.81
749 777 9.150348 CATTTTGTTCCCCATAATAACTTGTTC 57.850 33.333 0.00 0.00 0.00 3.18
750 778 7.841282 TTTGTTCCCCATAATAACTTGTTCA 57.159 32.000 0.00 0.00 0.00 3.18
751 779 8.429237 TTTGTTCCCCATAATAACTTGTTCAT 57.571 30.769 0.00 0.00 0.00 2.57
754 782 9.707957 TGTTCCCCATAATAACTTGTTCATAAT 57.292 29.630 0.00 0.00 0.00 1.28
780 818 9.970395 TCATGGTAATCAAAATGATAAATCAGC 57.030 29.630 0.00 0.00 40.64 4.26
799 837 2.039480 AGCAGCCTCTCATTTTCAGTGA 59.961 45.455 0.00 0.00 0.00 3.41
800 838 2.419324 GCAGCCTCTCATTTTCAGTGAG 59.581 50.000 0.00 0.00 43.46 3.51
801 839 3.672808 CAGCCTCTCATTTTCAGTGAGT 58.327 45.455 0.00 0.00 42.82 3.41
802 840 3.683822 CAGCCTCTCATTTTCAGTGAGTC 59.316 47.826 0.00 0.00 42.82 3.36
814 852 1.209640 GTGAGTCGGTCAGTCGGTC 59.790 63.158 0.00 0.00 35.13 4.79
940 979 7.084268 ACCAATCTTTCCCTTATATCTCCTG 57.916 40.000 0.00 0.00 0.00 3.86
942 981 5.770685 ATCTTTCCCTTATATCTCCTGCC 57.229 43.478 0.00 0.00 0.00 4.85
984 1023 1.874386 GAATCATCAGCGAGCGAGCG 61.874 60.000 0.00 0.00 43.00 5.03
986 1025 2.997621 ATCATCAGCGAGCGAGCGAC 62.998 60.000 1.41 0.00 43.00 5.19
1350 1396 1.237285 CCGTCAAGAAGGGCAAGGTG 61.237 60.000 0.00 0.00 0.00 4.00
1485 1531 2.579787 GGCGTCGACATCTCCGTG 60.580 66.667 17.16 0.00 0.00 4.94
1743 1789 2.183046 GAGCTGCAGGAGGTCGTC 59.817 66.667 17.12 0.00 39.36 4.20
1746 1792 2.179517 CTGCAGGAGGTCGTCGAC 59.820 66.667 17.16 17.16 0.00 4.20
1923 1969 1.797933 CGAGCTCTTCGTCGGTGTG 60.798 63.158 12.85 0.00 44.27 3.82
2294 2344 7.092716 AGAATTATGGTTGCTTTGCTTAGTTG 58.907 34.615 0.00 0.00 0.00 3.16
2324 2374 7.841956 TGTTCTGAATTTTGAAAACCTAACCA 58.158 30.769 0.00 0.00 0.00 3.67
2375 2425 5.808042 TTCTCTGAAGACATAATTGCTGC 57.192 39.130 0.00 0.00 0.00 5.25
2518 2578 2.472695 TCTGTATGGTGAACTGGTGC 57.527 50.000 0.00 0.00 0.00 5.01
2582 2642 2.851195 CGAAGGGTAGCTTGCCATATT 58.149 47.619 8.92 1.57 0.00 1.28
2591 2651 2.001872 GCTTGCCATATTGTTTGCCAC 58.998 47.619 0.00 0.00 0.00 5.01
2595 2655 4.652421 TGCCATATTGTTTGCCACTATG 57.348 40.909 0.00 0.00 36.78 2.23
2617 2677 4.220821 TGTCCTTAGTAGAGTTGGAGCTTG 59.779 45.833 0.00 0.00 0.00 4.01
2653 2713 7.155328 AGTCTATCAGCTCTTTTTCGAAGAAA 58.845 34.615 2.50 4.40 45.90 2.52
2722 2782 1.382522 CACACTGAGTGCAAACCTGT 58.617 50.000 13.37 0.00 42.15 4.00
2735 2795 5.009610 GTGCAAACCTGTCCTCTTGATAAAA 59.990 40.000 0.00 0.00 0.00 1.52
2736 2796 5.774690 TGCAAACCTGTCCTCTTGATAAAAT 59.225 36.000 0.00 0.00 0.00 1.82
2785 2845 7.389053 ACAACTCAATCTCTTTGACCTTACATC 59.611 37.037 0.00 0.00 39.44 3.06
2794 2854 6.650120 TCTTTGACCTTACATCCCTAATGAC 58.350 40.000 0.00 0.00 38.83 3.06
3026 3168 8.860088 AGCTAAACAAGTTTTGGTATCAGAAAT 58.140 29.630 9.41 0.00 35.12 2.17
3047 3189 4.819105 TTTCACTGAGTATGGTCCGAAT 57.181 40.909 0.00 0.00 0.00 3.34
3222 3444 9.825972 ATAGTTCTGTAAATCACAAAATTGTCG 57.174 29.630 0.00 0.00 39.91 4.35
3347 3600 2.988493 CAATTGCCAACAATCCAGTTCG 59.012 45.455 0.00 0.00 45.90 3.95
3370 3623 5.491982 GGAATGGGTATGATAGGTAGCAAG 58.508 45.833 0.00 0.00 0.00 4.01
3371 3624 4.559862 ATGGGTATGATAGGTAGCAAGC 57.440 45.455 0.00 0.00 0.00 4.01
3585 3846 7.506114 TCTGTAACACATTTCACCTTTCTACT 58.494 34.615 0.00 0.00 0.00 2.57
3586 3847 7.990886 TCTGTAACACATTTCACCTTTCTACTT 59.009 33.333 0.00 0.00 0.00 2.24
3734 3997 2.795329 TCCCCTGCTTGATGAGTTTTC 58.205 47.619 0.00 0.00 0.00 2.29
3807 4070 5.843019 AATAGGTTCACTCCAGAGGAAAA 57.157 39.130 0.00 0.00 0.00 2.29
4065 4330 4.630894 TGTCACCATCAGTTGTTGAAAC 57.369 40.909 0.00 0.00 39.77 2.78
4075 4342 3.563808 CAGTTGTTGAAACGATCCTGGAA 59.436 43.478 0.00 0.00 0.00 3.53
4199 4466 2.034878 TCCATCATTCCTCGAGGTCAG 58.965 52.381 30.17 19.85 36.34 3.51
4238 4505 0.969149 TTGCTCCAAGCGAAGAGAGA 59.031 50.000 4.37 0.00 46.26 3.10
4311 4578 2.904866 TTGGTGGCAGGTGCGTTC 60.905 61.111 0.00 0.00 43.26 3.95
4327 4607 4.328712 GTGCGTTCTTTTTGTGGAAATTGT 59.671 37.500 0.00 0.00 0.00 2.71
4328 4608 5.517054 GTGCGTTCTTTTTGTGGAAATTGTA 59.483 36.000 0.00 0.00 0.00 2.41
4329 4609 6.200097 GTGCGTTCTTTTTGTGGAAATTGTAT 59.800 34.615 0.00 0.00 0.00 2.29
4330 4610 6.758886 TGCGTTCTTTTTGTGGAAATTGTATT 59.241 30.769 0.00 0.00 0.00 1.89
4406 4696 5.614760 GTGCTAACACGTATAACCACTTTG 58.385 41.667 0.00 0.00 36.98 2.77
4426 4716 2.529389 AGGGTTGCCGAGGAGGTT 60.529 61.111 0.00 0.00 43.70 3.50
4543 4833 0.036732 AGAAGATTGGGCAAGTCGCA 59.963 50.000 0.00 0.00 45.17 5.10
4555 4845 0.537188 AAGTCGCAATCGGGTCATCT 59.463 50.000 0.00 0.00 36.13 2.90
4556 4846 0.179100 AGTCGCAATCGGGTCATCTG 60.179 55.000 0.00 0.00 36.13 2.90
4557 4847 1.143838 TCGCAATCGGGTCATCTGG 59.856 57.895 0.00 0.00 36.13 3.86
4611 4912 2.291190 GCCAGTACGACAGGAGTAGATC 59.709 54.545 0.00 0.00 0.00 2.75
4630 4931 5.890334 AGATCGTTGCAAGAGAAACAAAAA 58.110 33.333 0.00 0.00 32.39 1.94
4688 4989 2.223377 CCAAGGAACTAGACGTGCAAAC 59.777 50.000 0.00 0.00 38.49 2.93
4732 5033 4.060205 CCCAGCATTTCTTGTCCTTTTTG 58.940 43.478 0.00 0.00 0.00 2.44
4737 5038 5.070313 AGCATTTCTTGTCCTTTTTGGCTTA 59.930 36.000 0.00 0.00 35.26 3.09
4762 5063 8.408043 AGTATCCTGATTGATGAAGTCTCTAG 57.592 38.462 0.00 0.00 0.00 2.43
4781 5082 0.032815 GCAGCCTCTATCGAAGGTCC 59.967 60.000 3.65 0.00 0.00 4.46
4792 5093 6.759272 TCTATCGAAGGTCCTTATCAATTGG 58.241 40.000 3.42 0.00 0.00 3.16
4793 5094 3.541632 TCGAAGGTCCTTATCAATTGGC 58.458 45.455 3.42 0.00 0.00 4.52
4840 5141 3.065510 CCTCAGATGACTACCACACTACG 59.934 52.174 0.00 0.00 0.00 3.51
4890 5191 5.528870 TGCAACACGTCACTCCTATATATG 58.471 41.667 0.00 0.00 0.00 1.78
4895 5196 3.193691 ACGTCACTCCTATATATGCTGCC 59.806 47.826 0.00 0.00 0.00 4.85
4930 5231 5.890985 TCATCCATGTTTGGGTTAATCGAAT 59.109 36.000 0.00 0.00 43.81 3.34
4931 5232 6.379703 TCATCCATGTTTGGGTTAATCGAATT 59.620 34.615 0.00 0.00 43.81 2.17
4974 5275 5.890334 AGTGACAAAACAAACACTACCATG 58.110 37.500 0.00 0.00 40.96 3.66
5000 5301 6.485313 TCCAATTACGCTAGTATCCCATTTTG 59.515 38.462 0.00 0.00 32.12 2.44
5017 5318 5.700832 CCATTTTGTGTAGCTGTGAGTAGAA 59.299 40.000 0.00 0.00 0.00 2.10
5037 5338 5.347342 AGAACTCTGAATGTCTGATTAGCG 58.653 41.667 0.00 0.00 0.00 4.26
5042 5343 5.961272 TCTGAATGTCTGATTAGCGTTACA 58.039 37.500 0.00 0.00 0.00 2.41
5046 5347 6.697455 TGAATGTCTGATTAGCGTTACATCTC 59.303 38.462 0.00 0.00 0.00 2.75
5053 5354 8.630037 TCTGATTAGCGTTACATCTCAGAAATA 58.370 33.333 0.00 0.00 35.86 1.40
5069 5370 6.741992 CAGAAATATCTGCCACTAACAACA 57.258 37.500 0.00 0.00 46.11 3.33
5084 5385 3.508744 ACAACAAAGCAACTGTTCTGG 57.491 42.857 0.00 0.00 34.80 3.86
5119 5423 0.749649 TTCCGCATTGTGTTTTGGCT 59.250 45.000 0.00 0.00 0.00 4.75
5171 5475 1.359117 CACGGCGGACATCGTAGAT 59.641 57.895 13.24 0.00 45.12 1.98
5240 5544 3.135348 AGATCATCAACACCCACATCGAT 59.865 43.478 0.00 0.00 0.00 3.59
5361 5665 1.654105 CATAAGTCGACTTGTCGTGCC 59.346 52.381 35.24 11.13 37.40 5.01
5363 5667 0.104304 AAGTCGACTTGTCGTGCCTT 59.896 50.000 29.24 16.84 34.38 4.35
5364 5668 0.597637 AGTCGACTTGTCGTGCCTTG 60.598 55.000 13.58 0.00 0.00 3.61
5365 5669 0.874607 GTCGACTTGTCGTGCCTTGT 60.875 55.000 20.30 0.00 0.00 3.16
5366 5670 0.669619 TCGACTTGTCGTGCCTTGTA 59.330 50.000 20.30 0.00 0.00 2.41
5370 5674 2.806244 GACTTGTCGTGCCTTGTATGTT 59.194 45.455 0.00 0.00 0.00 2.71
5372 5676 3.630312 ACTTGTCGTGCCTTGTATGTTTT 59.370 39.130 0.00 0.00 0.00 2.43
5373 5677 3.889196 TGTCGTGCCTTGTATGTTTTC 57.111 42.857 0.00 0.00 0.00 2.29
5374 5678 2.550606 TGTCGTGCCTTGTATGTTTTCC 59.449 45.455 0.00 0.00 0.00 3.13
5395 5704 3.552273 CCGTGATTATACGAGGGTCCAAG 60.552 52.174 0.00 0.00 46.46 3.61
5489 5803 2.126463 TACTGACACTGAGCGCGC 60.126 61.111 26.66 26.66 0.00 6.86
5534 5850 1.689984 TTTGCCTGTCTGCATGTTCA 58.310 45.000 0.00 0.00 41.70 3.18
5544 5860 7.415541 GCCTGTCTGCATGTTCAGATTAAATTA 60.416 37.037 6.35 0.00 44.04 1.40
5637 5956 1.977056 TGCCATGAGATTGATCCAGC 58.023 50.000 0.00 0.00 0.00 4.85
5653 5984 6.122277 TGATCCAGCTTATAAGGAAAACCAG 58.878 40.000 14.28 0.00 34.62 4.00
5701 6043 2.385091 CGGGCCGAAAACCGTACAG 61.385 63.158 24.41 0.00 44.85 2.74
5827 6173 1.407979 GTCGTCGAGGGGTCACAATAT 59.592 52.381 5.12 0.00 0.00 1.28
5829 6175 1.269621 CGTCGAGGGGTCACAATATCC 60.270 57.143 0.00 0.00 0.00 2.59
5842 6188 5.934625 GTCACAATATCCAGACTTGACAAGT 59.065 40.000 20.70 20.70 46.38 3.16
5854 6200 3.262420 CTTGACAAGTAGCCTAACGCAT 58.738 45.455 7.05 0.00 41.38 4.73
5860 6206 1.548719 AGTAGCCTAACGCATCACACA 59.451 47.619 0.00 0.00 41.38 3.72
6078 6434 1.211212 CCATGGAGGTCTTGAGCATGA 59.789 52.381 5.56 0.00 0.00 3.07
6088 6444 2.291465 TCTTGAGCATGAACAGCAACAC 59.709 45.455 0.00 0.00 0.00 3.32
6134 6490 1.342174 AGACGAACACATACCACCGTT 59.658 47.619 0.00 0.00 0.00 4.44
6313 6683 1.471684 CTTCATCTGACCAAGCAAGGC 59.528 52.381 0.00 0.00 0.00 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 0.108396 GGCAACAAACCAGGGCAAAT 59.892 50.000 0.00 0.00 0.00 2.32
18 19 1.001393 TTTCGGGATCCCTGGCAAC 60.001 57.895 28.42 0.14 0.00 4.17
19 20 1.302949 CTTTCGGGATCCCTGGCAA 59.697 57.895 28.42 12.57 0.00 4.52
20 21 2.679342 CCTTTCGGGATCCCTGGCA 61.679 63.158 28.42 8.79 37.23 4.92
21 22 2.193248 CCTTTCGGGATCCCTGGC 59.807 66.667 28.42 2.14 37.23 4.85
22 23 4.066614 TCCTTTCGGGATCCCTGG 57.933 61.111 28.42 22.17 39.58 4.45
23 24 0.983378 AGGTCCTTTCGGGATCCCTG 60.983 60.000 28.42 20.75 46.23 4.45
24 25 0.253207 AAGGTCCTTTCGGGATCCCT 60.253 55.000 28.42 3.13 46.23 4.20
25 26 0.624254 AAAGGTCCTTTCGGGATCCC 59.376 55.000 22.12 22.12 46.23 3.85
26 27 2.509166 AAAAGGTCCTTTCGGGATCC 57.491 50.000 17.35 1.92 46.23 3.36
29 30 3.497227 CCACTAAAAAGGTCCTTTCGGGA 60.497 47.826 17.35 2.84 42.77 5.14
30 31 2.817844 CCACTAAAAAGGTCCTTTCGGG 59.182 50.000 17.35 11.83 31.99 5.14
31 32 3.483421 ACCACTAAAAAGGTCCTTTCGG 58.517 45.455 17.35 14.08 31.99 4.30
32 33 6.206048 ACATTACCACTAAAAAGGTCCTTTCG 59.794 38.462 17.35 11.10 39.31 3.46
33 34 7.520451 ACATTACCACTAAAAAGGTCCTTTC 57.480 36.000 17.35 0.00 39.31 2.62
34 35 7.562088 TGAACATTACCACTAAAAAGGTCCTTT 59.438 33.333 11.33 11.33 39.31 3.11
35 36 7.064229 TGAACATTACCACTAAAAAGGTCCTT 58.936 34.615 0.00 0.00 39.31 3.36
36 37 6.607019 TGAACATTACCACTAAAAAGGTCCT 58.393 36.000 0.00 0.00 39.31 3.85
37 38 6.887626 TGAACATTACCACTAAAAAGGTCC 57.112 37.500 0.00 0.00 39.31 4.46
38 39 9.758651 AAAATGAACATTACCACTAAAAAGGTC 57.241 29.630 0.37 0.00 39.31 3.85
39 40 9.758651 GAAAATGAACATTACCACTAAAAAGGT 57.241 29.630 0.37 0.00 41.89 3.50
40 41 8.911662 CGAAAATGAACATTACCACTAAAAAGG 58.088 33.333 0.37 0.00 0.00 3.11
41 42 9.672086 TCGAAAATGAACATTACCACTAAAAAG 57.328 29.630 0.37 0.00 0.00 2.27
42 43 9.453325 GTCGAAAATGAACATTACCACTAAAAA 57.547 29.630 0.37 0.00 0.00 1.94
43 44 7.799447 CGTCGAAAATGAACATTACCACTAAAA 59.201 33.333 0.37 0.00 0.00 1.52
44 45 7.292292 CGTCGAAAATGAACATTACCACTAAA 58.708 34.615 0.37 0.00 0.00 1.85
45 46 6.128499 CCGTCGAAAATGAACATTACCACTAA 60.128 38.462 0.00 0.00 0.00 2.24
46 47 5.349270 CCGTCGAAAATGAACATTACCACTA 59.651 40.000 0.00 0.00 0.00 2.74
47 48 4.153475 CCGTCGAAAATGAACATTACCACT 59.847 41.667 0.00 0.00 0.00 4.00
48 49 4.152759 TCCGTCGAAAATGAACATTACCAC 59.847 41.667 0.00 0.00 0.00 4.16
49 50 4.316645 TCCGTCGAAAATGAACATTACCA 58.683 39.130 0.00 0.00 0.00 3.25
50 51 4.726876 GCTCCGTCGAAAATGAACATTACC 60.727 45.833 0.00 0.00 0.00 2.85
51 52 4.142988 TGCTCCGTCGAAAATGAACATTAC 60.143 41.667 0.00 0.00 0.00 1.89
52 53 3.997681 TGCTCCGTCGAAAATGAACATTA 59.002 39.130 0.00 0.00 0.00 1.90
53 54 2.811431 TGCTCCGTCGAAAATGAACATT 59.189 40.909 0.00 0.00 0.00 2.71
54 55 2.422597 TGCTCCGTCGAAAATGAACAT 58.577 42.857 0.00 0.00 0.00 2.71
55 56 1.872388 TGCTCCGTCGAAAATGAACA 58.128 45.000 0.00 0.00 0.00 3.18
56 57 2.412847 CCTTGCTCCGTCGAAAATGAAC 60.413 50.000 0.00 0.00 0.00 3.18
57 58 1.804151 CCTTGCTCCGTCGAAAATGAA 59.196 47.619 0.00 0.00 0.00 2.57
58 59 1.438651 CCTTGCTCCGTCGAAAATGA 58.561 50.000 0.00 0.00 0.00 2.57
59 60 0.447801 CCCTTGCTCCGTCGAAAATG 59.552 55.000 0.00 0.00 0.00 2.32
60 61 0.676782 CCCCTTGCTCCGTCGAAAAT 60.677 55.000 0.00 0.00 0.00 1.82
61 62 1.302192 CCCCTTGCTCCGTCGAAAA 60.302 57.895 0.00 0.00 0.00 2.29
62 63 2.345991 CCCCTTGCTCCGTCGAAA 59.654 61.111 0.00 0.00 0.00 3.46
63 64 2.920912 ACCCCTTGCTCCGTCGAA 60.921 61.111 0.00 0.00 0.00 3.71
64 65 3.379445 GACCCCTTGCTCCGTCGA 61.379 66.667 0.00 0.00 0.00 4.20
65 66 3.358076 GAGACCCCTTGCTCCGTCG 62.358 68.421 0.00 0.00 0.00 5.12
66 67 2.579738 GAGACCCCTTGCTCCGTC 59.420 66.667 0.00 0.00 0.00 4.79
67 68 3.382832 CGAGACCCCTTGCTCCGT 61.383 66.667 0.00 0.00 0.00 4.69
68 69 4.148825 CCGAGACCCCTTGCTCCG 62.149 72.222 0.00 0.00 0.00 4.63
69 70 4.475135 GCCGAGACCCCTTGCTCC 62.475 72.222 0.00 0.00 0.00 4.70
70 71 3.706373 TGCCGAGACCCCTTGCTC 61.706 66.667 0.00 0.00 0.00 4.26
71 72 4.021925 GTGCCGAGACCCCTTGCT 62.022 66.667 0.00 0.00 0.00 3.91
73 74 1.622607 TATGGTGCCGAGACCCCTTG 61.623 60.000 0.86 0.00 34.79 3.61
74 75 0.694444 ATATGGTGCCGAGACCCCTT 60.694 55.000 0.86 0.00 34.79 3.95
75 76 0.694444 AATATGGTGCCGAGACCCCT 60.694 55.000 0.86 0.00 34.79 4.79
76 77 0.250338 GAATATGGTGCCGAGACCCC 60.250 60.000 0.86 0.00 34.79 4.95
77 78 0.250338 GGAATATGGTGCCGAGACCC 60.250 60.000 0.86 0.00 34.79 4.46
78 79 0.468226 TGGAATATGGTGCCGAGACC 59.532 55.000 0.00 0.00 36.43 3.85
79 80 2.213499 CTTGGAATATGGTGCCGAGAC 58.787 52.381 0.00 0.00 35.59 3.36
80 81 1.475034 GCTTGGAATATGGTGCCGAGA 60.475 52.381 0.00 0.00 35.59 4.04
81 82 0.947244 GCTTGGAATATGGTGCCGAG 59.053 55.000 0.00 0.00 36.47 4.63
82 83 0.465460 GGCTTGGAATATGGTGCCGA 60.465 55.000 0.00 0.00 0.00 5.54
83 84 2.032981 GGCTTGGAATATGGTGCCG 58.967 57.895 0.00 0.00 0.00 5.69
84 85 1.455383 CCGGCTTGGAATATGGTGCC 61.455 60.000 0.00 0.00 42.00 5.01
85 86 0.465460 TCCGGCTTGGAATATGGTGC 60.465 55.000 0.00 0.00 46.38 5.01
86 87 3.798794 TCCGGCTTGGAATATGGTG 57.201 52.632 0.00 0.00 46.38 4.17
95 96 0.319383 CGAGAGATCATCCGGCTTGG 60.319 60.000 0.00 0.00 40.09 3.61
96 97 0.319383 CCGAGAGATCATCCGGCTTG 60.319 60.000 0.00 0.00 35.76 4.01
97 98 2.045280 CCGAGAGATCATCCGGCTT 58.955 57.895 0.00 0.00 35.76 4.35
98 99 3.770589 CCGAGAGATCATCCGGCT 58.229 61.111 0.00 0.00 35.76 5.52
100 101 1.006805 GTGCCGAGAGATCATCCGG 60.007 63.158 13.19 13.19 41.79 5.14
101 102 0.103026 TTGTGCCGAGAGATCATCCG 59.897 55.000 0.00 0.00 0.00 4.18
102 103 2.315925 TTTGTGCCGAGAGATCATCC 57.684 50.000 0.00 0.00 0.00 3.51
103 104 3.436704 TGTTTTTGTGCCGAGAGATCATC 59.563 43.478 0.00 0.00 0.00 2.92
104 105 3.411446 TGTTTTTGTGCCGAGAGATCAT 58.589 40.909 0.00 0.00 0.00 2.45
105 106 2.844946 TGTTTTTGTGCCGAGAGATCA 58.155 42.857 0.00 0.00 0.00 2.92
106 107 3.436704 TCATGTTTTTGTGCCGAGAGATC 59.563 43.478 0.00 0.00 0.00 2.75
107 108 3.189287 GTCATGTTTTTGTGCCGAGAGAT 59.811 43.478 0.00 0.00 0.00 2.75
108 109 2.548057 GTCATGTTTTTGTGCCGAGAGA 59.452 45.455 0.00 0.00 0.00 3.10
109 110 2.350772 GGTCATGTTTTTGTGCCGAGAG 60.351 50.000 0.00 0.00 0.00 3.20
110 111 1.606668 GGTCATGTTTTTGTGCCGAGA 59.393 47.619 0.00 0.00 0.00 4.04
111 112 1.608590 AGGTCATGTTTTTGTGCCGAG 59.391 47.619 0.00 0.00 0.00 4.63
112 113 1.686355 AGGTCATGTTTTTGTGCCGA 58.314 45.000 0.00 0.00 0.00 5.54
113 114 2.126467 CAAGGTCATGTTTTTGTGCCG 58.874 47.619 0.00 0.00 0.00 5.69
114 115 3.177997 ACAAGGTCATGTTTTTGTGCC 57.822 42.857 9.51 0.00 32.90 5.01
115 116 6.345723 CGAAATACAAGGTCATGTTTTTGTGC 60.346 38.462 16.23 7.02 35.52 4.57
116 117 6.915300 TCGAAATACAAGGTCATGTTTTTGTG 59.085 34.615 16.23 3.28 35.52 3.33
117 118 7.033530 TCGAAATACAAGGTCATGTTTTTGT 57.966 32.000 13.16 13.16 35.52 2.83
118 119 7.860373 TCTTCGAAATACAAGGTCATGTTTTTG 59.140 33.333 0.00 0.00 35.52 2.44
119 120 7.936584 TCTTCGAAATACAAGGTCATGTTTTT 58.063 30.769 0.00 0.00 37.23 1.94
120 121 7.504924 TCTTCGAAATACAAGGTCATGTTTT 57.495 32.000 0.00 0.00 34.75 2.43
121 122 7.687941 ATCTTCGAAATACAAGGTCATGTTT 57.312 32.000 0.00 0.00 34.75 2.83
122 123 8.786826 TTATCTTCGAAATACAAGGTCATGTT 57.213 30.769 0.00 0.00 34.75 2.71
123 124 8.964476 ATTATCTTCGAAATACAAGGTCATGT 57.036 30.769 0.00 0.00 37.32 3.21
124 125 8.217115 CGATTATCTTCGAAATACAAGGTCATG 58.783 37.037 0.00 0.00 41.62 3.07
125 126 7.926555 ACGATTATCTTCGAAATACAAGGTCAT 59.073 33.333 0.00 0.00 41.62 3.06
126 127 7.262772 ACGATTATCTTCGAAATACAAGGTCA 58.737 34.615 0.00 0.00 41.62 4.02
127 128 7.695869 ACGATTATCTTCGAAATACAAGGTC 57.304 36.000 0.00 0.00 41.62 3.85
128 129 7.465513 GCAACGATTATCTTCGAAATACAAGGT 60.466 37.037 0.00 0.00 41.62 3.50
129 130 6.846283 GCAACGATTATCTTCGAAATACAAGG 59.154 38.462 0.00 0.00 41.62 3.61
130 131 7.398746 TGCAACGATTATCTTCGAAATACAAG 58.601 34.615 0.00 0.00 41.62 3.16
131 132 7.297229 TGCAACGATTATCTTCGAAATACAA 57.703 32.000 0.00 0.00 41.62 2.41
132 133 6.895607 TGCAACGATTATCTTCGAAATACA 57.104 33.333 0.00 0.00 41.62 2.29
133 134 7.564128 TCATGCAACGATTATCTTCGAAATAC 58.436 34.615 0.00 0.00 41.62 1.89
134 135 7.651704 TCTCATGCAACGATTATCTTCGAAATA 59.348 33.333 0.00 0.00 41.62 1.40
135 136 6.479990 TCTCATGCAACGATTATCTTCGAAAT 59.520 34.615 0.00 0.00 41.62 2.17
136 137 5.810074 TCTCATGCAACGATTATCTTCGAAA 59.190 36.000 0.00 0.00 41.62 3.46
137 138 5.348164 TCTCATGCAACGATTATCTTCGAA 58.652 37.500 0.00 0.00 41.62 3.71
138 139 4.932146 TCTCATGCAACGATTATCTTCGA 58.068 39.130 0.00 0.00 41.62 3.71
139 140 5.835911 ATCTCATGCAACGATTATCTTCG 57.164 39.130 0.00 0.00 44.56 3.79
140 141 7.182361 TGAATCTCATGCAACGATTATCTTC 57.818 36.000 8.03 0.00 0.00 2.87
141 142 7.255035 CCTTGAATCTCATGCAACGATTATCTT 60.255 37.037 8.03 0.00 0.00 2.40
142 143 6.204301 CCTTGAATCTCATGCAACGATTATCT 59.796 38.462 8.03 0.00 0.00 1.98
143 144 6.369005 CCTTGAATCTCATGCAACGATTATC 58.631 40.000 8.03 0.44 0.00 1.75
144 145 5.278169 GCCTTGAATCTCATGCAACGATTAT 60.278 40.000 8.03 0.00 0.00 1.28
145 146 4.035558 GCCTTGAATCTCATGCAACGATTA 59.964 41.667 8.03 0.00 0.00 1.75
146 147 3.181493 GCCTTGAATCTCATGCAACGATT 60.181 43.478 7.84 7.84 0.00 3.34
147 148 2.357009 GCCTTGAATCTCATGCAACGAT 59.643 45.455 0.00 0.00 0.00 3.73
148 149 1.739466 GCCTTGAATCTCATGCAACGA 59.261 47.619 0.00 0.00 0.00 3.85
149 150 1.202222 GGCCTTGAATCTCATGCAACG 60.202 52.381 0.00 0.00 0.00 4.10
150 151 1.820519 TGGCCTTGAATCTCATGCAAC 59.179 47.619 3.32 0.00 0.00 4.17
151 152 1.820519 GTGGCCTTGAATCTCATGCAA 59.179 47.619 3.32 0.00 0.00 4.08
152 153 1.466856 GTGGCCTTGAATCTCATGCA 58.533 50.000 3.32 0.00 0.00 3.96
153 154 0.379669 CGTGGCCTTGAATCTCATGC 59.620 55.000 3.32 0.00 0.00 4.06
154 155 1.742761 ACGTGGCCTTGAATCTCATG 58.257 50.000 3.32 0.00 0.00 3.07
155 156 2.496899 AACGTGGCCTTGAATCTCAT 57.503 45.000 3.32 0.00 0.00 2.90
156 157 2.270352 AAACGTGGCCTTGAATCTCA 57.730 45.000 3.32 0.00 0.00 3.27
157 158 3.643159 AAAAACGTGGCCTTGAATCTC 57.357 42.857 3.32 0.00 0.00 2.75
158 159 6.827586 TTATAAAAACGTGGCCTTGAATCT 57.172 33.333 3.32 0.00 0.00 2.40
159 160 6.413818 CGATTATAAAAACGTGGCCTTGAATC 59.586 38.462 3.32 2.52 0.00 2.52
160 161 6.262601 CGATTATAAAAACGTGGCCTTGAAT 58.737 36.000 3.32 0.00 0.00 2.57
161 162 5.632959 CGATTATAAAAACGTGGCCTTGAA 58.367 37.500 3.32 0.00 0.00 2.69
162 163 4.437659 GCGATTATAAAAACGTGGCCTTGA 60.438 41.667 3.32 0.00 33.79 3.02
163 164 3.789224 GCGATTATAAAAACGTGGCCTTG 59.211 43.478 3.32 0.00 33.79 3.61
164 165 3.486209 CGCGATTATAAAAACGTGGCCTT 60.486 43.478 0.00 0.00 37.63 4.35
165 166 2.031191 CGCGATTATAAAAACGTGGCCT 59.969 45.455 0.00 0.00 37.63 5.19
166 167 2.223089 ACGCGATTATAAAAACGTGGCC 60.223 45.455 15.93 0.00 43.26 5.36
167 168 2.774074 CACGCGATTATAAAAACGTGGC 59.226 45.455 15.93 5.24 45.11 5.01
170 171 5.919196 AGTTTCACGCGATTATAAAAACGT 58.081 33.333 15.93 4.72 33.79 3.99
171 172 6.190333 CAGAGTTTCACGCGATTATAAAAACG 59.810 38.462 15.93 0.00 34.33 3.60
172 173 7.231607 TCAGAGTTTCACGCGATTATAAAAAC 58.768 34.615 15.93 11.57 0.00 2.43
173 174 7.354025 TCAGAGTTTCACGCGATTATAAAAA 57.646 32.000 15.93 0.00 0.00 1.94
174 175 6.954616 TCAGAGTTTCACGCGATTATAAAA 57.045 33.333 15.93 0.56 0.00 1.52
175 176 6.954616 TTCAGAGTTTCACGCGATTATAAA 57.045 33.333 15.93 2.44 0.00 1.40
176 177 6.533723 ACATTCAGAGTTTCACGCGATTATAA 59.466 34.615 15.93 0.00 0.00 0.98
177 178 6.040247 ACATTCAGAGTTTCACGCGATTATA 58.960 36.000 15.93 0.00 0.00 0.98
178 179 4.870426 ACATTCAGAGTTTCACGCGATTAT 59.130 37.500 15.93 0.00 0.00 1.28
179 180 4.242475 ACATTCAGAGTTTCACGCGATTA 58.758 39.130 15.93 0.00 0.00 1.75
180 181 3.067106 ACATTCAGAGTTTCACGCGATT 58.933 40.909 15.93 0.00 0.00 3.34
181 182 2.688507 ACATTCAGAGTTTCACGCGAT 58.311 42.857 15.93 0.00 0.00 4.58
182 183 2.148916 ACATTCAGAGTTTCACGCGA 57.851 45.000 15.93 0.00 0.00 5.87
183 184 2.476619 AGAACATTCAGAGTTTCACGCG 59.523 45.455 3.53 3.53 0.00 6.01
184 185 4.474226 AAGAACATTCAGAGTTTCACGC 57.526 40.909 0.00 0.00 0.00 5.34
185 186 6.420903 TGACTAAGAACATTCAGAGTTTCACG 59.579 38.462 0.00 0.00 0.00 4.35
186 187 7.567771 CGTGACTAAGAACATTCAGAGTTTCAC 60.568 40.741 0.00 0.00 0.00 3.18
187 188 6.420903 CGTGACTAAGAACATTCAGAGTTTCA 59.579 38.462 0.00 0.00 0.00 2.69
188 189 6.641314 TCGTGACTAAGAACATTCAGAGTTTC 59.359 38.462 0.00 0.00 0.00 2.78
189 190 6.421202 GTCGTGACTAAGAACATTCAGAGTTT 59.579 38.462 0.00 0.00 0.00 2.66
190 191 5.921408 GTCGTGACTAAGAACATTCAGAGTT 59.079 40.000 0.00 0.00 0.00 3.01
191 192 5.462405 GTCGTGACTAAGAACATTCAGAGT 58.538 41.667 0.00 0.00 0.00 3.24
192 193 4.859798 GGTCGTGACTAAGAACATTCAGAG 59.140 45.833 0.00 0.00 0.00 3.35
193 194 4.279922 TGGTCGTGACTAAGAACATTCAGA 59.720 41.667 0.00 0.00 26.68 3.27
194 195 4.556233 TGGTCGTGACTAAGAACATTCAG 58.444 43.478 0.00 0.00 26.68 3.02
195 196 4.594123 TGGTCGTGACTAAGAACATTCA 57.406 40.909 0.00 0.00 26.68 2.57
196 197 4.201724 GCATGGTCGTGACTAAGAACATTC 60.202 45.833 0.00 0.00 39.25 2.67
197 198 3.684788 GCATGGTCGTGACTAAGAACATT 59.315 43.478 0.00 0.00 39.25 2.71
198 199 3.262420 GCATGGTCGTGACTAAGAACAT 58.738 45.455 0.00 0.00 42.33 2.71
199 200 2.611971 GGCATGGTCGTGACTAAGAACA 60.612 50.000 0.00 0.00 36.46 3.18
200 201 2.000447 GGCATGGTCGTGACTAAGAAC 59.000 52.381 0.00 0.00 0.00 3.01
201 202 1.621317 TGGCATGGTCGTGACTAAGAA 59.379 47.619 0.00 0.00 0.00 2.52
202 203 1.262417 TGGCATGGTCGTGACTAAGA 58.738 50.000 0.00 0.00 0.00 2.10
203 204 2.315925 ATGGCATGGTCGTGACTAAG 57.684 50.000 0.00 0.00 0.00 2.18
204 205 2.779755 AATGGCATGGTCGTGACTAA 57.220 45.000 0.00 0.00 0.00 2.24
205 206 2.779755 AAATGGCATGGTCGTGACTA 57.220 45.000 0.00 0.00 0.00 2.59
206 207 1.909700 AAAATGGCATGGTCGTGACT 58.090 45.000 0.00 0.00 0.00 3.41
207 208 2.723124 AAAAATGGCATGGTCGTGAC 57.277 45.000 0.00 0.00 0.00 3.67
224 225 8.806634 CATGATCGAAAGTTTTTCTCACAAAAA 58.193 29.630 0.00 0.00 0.00 1.94
225 226 7.434897 CCATGATCGAAAGTTTTTCTCACAAAA 59.565 33.333 0.00 0.00 0.00 2.44
226 227 6.917477 CCATGATCGAAAGTTTTTCTCACAAA 59.083 34.615 0.00 0.00 0.00 2.83
227 228 6.039270 ACCATGATCGAAAGTTTTTCTCACAA 59.961 34.615 0.00 0.00 0.00 3.33
228 229 5.530915 ACCATGATCGAAAGTTTTTCTCACA 59.469 36.000 0.00 0.00 0.00 3.58
229 230 5.853282 CACCATGATCGAAAGTTTTTCTCAC 59.147 40.000 0.00 0.00 0.00 3.51
230 231 5.530915 ACACCATGATCGAAAGTTTTTCTCA 59.469 36.000 0.00 0.00 0.00 3.27
231 232 6.002062 ACACCATGATCGAAAGTTTTTCTC 57.998 37.500 0.00 0.00 0.00 2.87
232 233 6.485313 TGTACACCATGATCGAAAGTTTTTCT 59.515 34.615 0.00 0.00 0.00 2.52
233 234 6.664515 TGTACACCATGATCGAAAGTTTTTC 58.335 36.000 0.00 0.00 0.00 2.29
234 235 6.627395 TGTACACCATGATCGAAAGTTTTT 57.373 33.333 0.00 0.00 0.00 1.94
235 236 6.817765 ATGTACACCATGATCGAAAGTTTT 57.182 33.333 0.00 0.00 30.69 2.43
236 237 6.037172 GCTATGTACACCATGATCGAAAGTTT 59.963 38.462 0.00 0.00 34.86 2.66
237 238 5.523916 GCTATGTACACCATGATCGAAAGTT 59.476 40.000 0.00 0.00 34.86 2.66
238 239 5.050490 GCTATGTACACCATGATCGAAAGT 58.950 41.667 0.00 0.00 34.86 2.66
239 240 5.292765 AGCTATGTACACCATGATCGAAAG 58.707 41.667 0.00 0.00 34.86 2.62
240 241 5.276461 AGCTATGTACACCATGATCGAAA 57.724 39.130 0.00 0.00 34.86 3.46
241 242 4.937201 AGCTATGTACACCATGATCGAA 57.063 40.909 0.00 0.00 34.86 3.71
242 243 6.399639 TTTAGCTATGTACACCATGATCGA 57.600 37.500 0.00 0.00 34.86 3.59
243 244 8.757164 TTATTTAGCTATGTACACCATGATCG 57.243 34.615 0.00 0.00 34.86 3.69
245 246 9.845740 TGTTTATTTAGCTATGTACACCATGAT 57.154 29.630 0.00 0.00 34.86 2.45
246 247 9.674068 TTGTTTATTTAGCTATGTACACCATGA 57.326 29.630 0.00 0.00 34.86 3.07
249 250 8.732531 GGTTTGTTTATTTAGCTATGTACACCA 58.267 33.333 0.00 0.00 0.00 4.17
250 251 8.732531 TGGTTTGTTTATTTAGCTATGTACACC 58.267 33.333 0.00 0.00 0.00 4.16
254 255 9.796120 GCAATGGTTTGTTTATTTAGCTATGTA 57.204 29.630 0.00 0.00 35.17 2.29
255 256 8.531146 AGCAATGGTTTGTTTATTTAGCTATGT 58.469 29.630 0.00 0.00 35.17 2.29
256 257 8.931385 AGCAATGGTTTGTTTATTTAGCTATG 57.069 30.769 0.00 0.00 35.17 2.23
257 258 8.748412 TGAGCAATGGTTTGTTTATTTAGCTAT 58.252 29.630 0.00 0.00 35.17 2.97
258 259 8.116651 TGAGCAATGGTTTGTTTATTTAGCTA 57.883 30.769 0.00 0.00 35.17 3.32
259 260 6.991938 TGAGCAATGGTTTGTTTATTTAGCT 58.008 32.000 0.00 0.00 35.17 3.32
260 261 7.622048 GCTTGAGCAATGGTTTGTTTATTTAGC 60.622 37.037 0.00 0.00 41.59 3.09
261 262 7.599998 AGCTTGAGCAATGGTTTGTTTATTTAG 59.400 33.333 5.70 0.00 45.16 1.85
262 263 7.441017 AGCTTGAGCAATGGTTTGTTTATTTA 58.559 30.769 5.70 0.00 45.16 1.40
263 264 6.290605 AGCTTGAGCAATGGTTTGTTTATTT 58.709 32.000 5.70 0.00 45.16 1.40
264 265 5.857268 AGCTTGAGCAATGGTTTGTTTATT 58.143 33.333 5.70 0.00 45.16 1.40
265 266 5.473066 AGCTTGAGCAATGGTTTGTTTAT 57.527 34.783 5.70 0.00 45.16 1.40
266 267 4.935352 AGCTTGAGCAATGGTTTGTTTA 57.065 36.364 5.70 0.00 45.16 2.01
267 268 3.825143 AGCTTGAGCAATGGTTTGTTT 57.175 38.095 5.70 0.00 45.16 2.83
268 269 3.460103 CAAGCTTGAGCAATGGTTTGTT 58.540 40.909 22.31 0.00 45.16 2.83
269 270 2.224113 CCAAGCTTGAGCAATGGTTTGT 60.224 45.455 28.05 0.00 45.16 2.83
270 271 2.409975 CCAAGCTTGAGCAATGGTTTG 58.590 47.619 28.05 2.25 45.16 2.93
271 272 2.825861 CCAAGCTTGAGCAATGGTTT 57.174 45.000 28.05 0.00 45.16 3.27
275 276 3.587797 ATTGACCAAGCTTGAGCAATG 57.412 42.857 29.53 17.00 45.16 2.82
276 277 4.951715 TCATATTGACCAAGCTTGAGCAAT 59.048 37.500 31.07 31.07 45.16 3.56
277 278 4.334552 TCATATTGACCAAGCTTGAGCAA 58.665 39.130 28.05 26.53 45.16 3.91
278 279 3.954200 TCATATTGACCAAGCTTGAGCA 58.046 40.909 28.05 20.41 45.16 4.26
279 280 4.337555 ACATCATATTGACCAAGCTTGAGC 59.662 41.667 28.05 18.13 42.49 4.26
280 281 7.558161 TTACATCATATTGACCAAGCTTGAG 57.442 36.000 28.05 18.94 0.00 3.02
281 282 7.828717 TCTTTACATCATATTGACCAAGCTTGA 59.171 33.333 28.05 8.10 0.00 3.02
282 283 7.988737 TCTTTACATCATATTGACCAAGCTTG 58.011 34.615 19.93 19.93 0.00 4.01
283 284 8.579850 TTCTTTACATCATATTGACCAAGCTT 57.420 30.769 0.00 0.00 0.00 3.74
284 285 8.757982 ATTCTTTACATCATATTGACCAAGCT 57.242 30.769 0.00 0.00 0.00 3.74
287 288 9.625747 TGCTATTCTTTACATCATATTGACCAA 57.374 29.630 0.00 0.00 0.00 3.67
288 289 9.625747 TTGCTATTCTTTACATCATATTGACCA 57.374 29.630 0.00 0.00 0.00 4.02
311 312 7.725326 TTTGTCGTCAATGTTTAGCAAATTTGC 60.725 33.333 31.36 31.36 42.60 3.68
312 313 6.746104 TGTCGTCAATGTTTAGCAAATTTG 57.254 33.333 14.03 14.03 0.00 2.32
313 314 7.763172 TTTGTCGTCAATGTTTAGCAAATTT 57.237 28.000 0.00 0.00 33.32 1.82
314 315 7.763172 TTTTGTCGTCAATGTTTAGCAAATT 57.237 28.000 0.00 0.00 33.32 1.82
315 316 7.042791 CCTTTTTGTCGTCAATGTTTAGCAAAT 60.043 33.333 0.00 0.00 33.32 2.32
316 317 6.254589 CCTTTTTGTCGTCAATGTTTAGCAAA 59.745 34.615 0.00 0.00 33.32 3.68
326 327 6.200854 GCATTCTTTTCCTTTTTGTCGTCAAT 59.799 34.615 0.00 0.00 33.32 2.57
340 341 4.742438 TTCACGTGTAGCATTCTTTTCC 57.258 40.909 16.51 0.00 0.00 3.13
356 357 5.234116 CCATTTGTTTTTCCCTCTTTTCACG 59.766 40.000 0.00 0.00 0.00 4.35
359 360 6.816136 TCTCCATTTGTTTTTCCCTCTTTTC 58.184 36.000 0.00 0.00 0.00 2.29
364 368 4.460731 CCTCTCTCCATTTGTTTTTCCCTC 59.539 45.833 0.00 0.00 0.00 4.30
365 369 4.411013 CCTCTCTCCATTTGTTTTTCCCT 58.589 43.478 0.00 0.00 0.00 4.20
372 376 2.921221 TCTCCCCTCTCTCCATTTGTT 58.079 47.619 0.00 0.00 0.00 2.83
375 379 3.808189 TCTTTCTCCCCTCTCTCCATTT 58.192 45.455 0.00 0.00 0.00 2.32
376 380 3.498614 TCTTTCTCCCCTCTCTCCATT 57.501 47.619 0.00 0.00 0.00 3.16
393 397 4.457257 CCTCCGCAAGATCTTCTTTTTCTT 59.543 41.667 4.57 0.00 33.78 2.52
396 400 4.006319 CTCCTCCGCAAGATCTTCTTTTT 58.994 43.478 4.57 0.00 33.78 1.94
428 438 1.548269 GAAGGGAGGACTCACACTCAG 59.452 57.143 4.17 0.00 34.87 3.35
524 536 8.533569 TTGTTTGGACTAGAAAGAAGGAAATT 57.466 30.769 0.00 0.00 0.00 1.82
595 611 2.723143 GACAAGTTGAAGACGTACCGAC 59.277 50.000 10.54 0.00 0.00 4.79
596 612 2.287788 GGACAAGTTGAAGACGTACCGA 60.288 50.000 10.54 0.00 0.00 4.69
597 613 2.056577 GGACAAGTTGAAGACGTACCG 58.943 52.381 10.54 0.00 0.00 4.02
598 614 2.410939 GGGACAAGTTGAAGACGTACC 58.589 52.381 10.54 0.00 0.00 3.34
599 615 2.036862 AGGGGACAAGTTGAAGACGTAC 59.963 50.000 10.54 0.00 0.00 3.67
600 616 2.036733 CAGGGGACAAGTTGAAGACGTA 59.963 50.000 10.54 0.00 0.00 3.57
601 617 1.129058 AGGGGACAAGTTGAAGACGT 58.871 50.000 10.54 0.00 0.00 4.34
602 618 1.512926 CAGGGGACAAGTTGAAGACG 58.487 55.000 10.54 0.00 0.00 4.18
603 619 1.239347 GCAGGGGACAAGTTGAAGAC 58.761 55.000 10.54 0.00 0.00 3.01
604 620 0.843309 TGCAGGGGACAAGTTGAAGA 59.157 50.000 10.54 0.00 0.00 2.87
605 621 0.954452 GTGCAGGGGACAAGTTGAAG 59.046 55.000 10.54 0.00 0.00 3.02
606 622 0.467290 GGTGCAGGGGACAAGTTGAA 60.467 55.000 10.54 0.00 0.00 2.69
607 623 1.150536 GGTGCAGGGGACAAGTTGA 59.849 57.895 10.54 0.00 0.00 3.18
608 624 0.400213 TAGGTGCAGGGGACAAGTTG 59.600 55.000 0.00 0.00 0.00 3.16
609 625 0.400594 GTAGGTGCAGGGGACAAGTT 59.599 55.000 0.00 0.00 0.00 2.66
635 651 2.029380 TCACGGTCTAACATGGTCAGTG 60.029 50.000 0.00 0.00 0.00 3.66
708 729 7.010738 GGGAACAAAATGATAATTGCTCATGTG 59.989 37.037 6.21 9.25 33.69 3.21
715 743 8.907222 ATTATGGGGAACAAAATGATAATTGC 57.093 30.769 0.00 0.00 0.00 3.56
754 782 9.970395 GCTGATTTATCATTTTGATTACCATGA 57.030 29.630 0.00 0.00 38.26 3.07
780 818 3.672808 ACTCACTGAAAATGAGAGGCTG 58.327 45.455 8.92 0.00 45.46 4.85
799 837 0.956410 CTCTGACCGACTGACCGACT 60.956 60.000 0.00 0.00 0.00 4.18
800 838 1.235948 ACTCTGACCGACTGACCGAC 61.236 60.000 0.00 0.00 0.00 4.79
801 839 0.536687 AACTCTGACCGACTGACCGA 60.537 55.000 0.00 0.00 0.00 4.69
802 840 0.387367 CAACTCTGACCGACTGACCG 60.387 60.000 0.00 0.00 0.00 4.79
814 852 1.610038 TCCACATTGCAAGCAACTCTG 59.390 47.619 9.97 7.42 38.88 3.35
984 1023 1.214589 CATGGCTGCTTGCTTGGTC 59.785 57.895 0.00 0.00 42.39 4.02
986 1025 2.577059 CCATGGCTGCTTGCTTGG 59.423 61.111 0.00 0.00 42.39 3.61
1743 1789 0.389948 CGGGGTTCTTGAGGAAGTCG 60.390 60.000 0.00 0.00 34.23 4.18
1746 1792 0.685097 TGTCGGGGTTCTTGAGGAAG 59.315 55.000 0.00 0.00 34.23 3.46
2046 2092 1.403814 TAATGGTCTGCTCCCTCTCG 58.596 55.000 0.00 0.00 0.00 4.04
2278 2328 7.809806 AGAACAATATCAACTAAGCAAAGCAAC 59.190 33.333 0.00 0.00 0.00 4.17
2310 2360 9.945904 AATTAAGTTTGTTGGTTAGGTTTTCAA 57.054 25.926 0.00 0.00 0.00 2.69
2319 2369 5.163405 TGGCAGCAATTAAGTTTGTTGGTTA 60.163 36.000 7.48 0.00 38.01 2.85
2324 2374 4.213906 GCAATGGCAGCAATTAAGTTTGTT 59.786 37.500 0.00 0.00 40.72 2.83
2375 2425 2.761786 ATCCCTTCCACATTCATGGG 57.238 50.000 0.00 0.00 40.49 4.00
2518 2578 8.539770 AGTTGAACTGTAGTTGTGATTATCTG 57.460 34.615 0.00 0.00 38.56 2.90
2582 2642 4.634012 ACTAAGGACATAGTGGCAAACA 57.366 40.909 0.00 0.00 34.86 2.83
2591 2651 5.830991 AGCTCCAACTCTACTAAGGACATAG 59.169 44.000 0.00 0.00 0.00 2.23
2595 2655 4.382147 CCAAGCTCCAACTCTACTAAGGAC 60.382 50.000 0.00 0.00 0.00 3.85
2617 2677 8.454570 AAGAGCTGATAGACTAGTAAACTACC 57.545 38.462 0.00 0.00 0.00 3.18
2665 2725 9.489393 TTGATTCGACGATTGAATTAATTTCTG 57.511 29.630 1.43 0.00 36.24 3.02
2673 2733 4.935205 TCACCTTGATTCGACGATTGAATT 59.065 37.500 0.00 0.00 36.24 2.17
2785 2845 8.682936 AGCAAAATAATCAGTAGTCATTAGGG 57.317 34.615 0.00 0.00 0.00 3.53
2828 2888 9.405587 CTGCAAATCGAAAAAGGATAAAAACTA 57.594 29.630 0.00 0.00 0.00 2.24
2838 2898 3.383761 AGCAACTGCAAATCGAAAAAGG 58.616 40.909 4.22 0.00 45.16 3.11
2946 3016 6.038714 GTGCATAACTAAAGCCTAGAAATGCT 59.961 38.462 21.31 0.00 40.17 3.79
3016 3158 8.723942 ACCATACTCAGTGAAATTTCTGATAC 57.276 34.615 18.64 8.74 39.48 2.24
3018 3160 6.825721 GGACCATACTCAGTGAAATTTCTGAT 59.174 38.462 18.64 8.11 39.48 2.90
3026 3168 4.819105 ATTCGGACCATACTCAGTGAAA 57.181 40.909 0.00 0.00 0.00 2.69
3047 3189 4.964897 AGATGATGACCCACTGAGTTCATA 59.035 41.667 0.00 0.00 0.00 2.15
3196 3418 9.825972 CGACAATTTTGTGATTTACAGAACTAT 57.174 29.630 0.00 0.00 42.43 2.12
3197 3419 7.801315 GCGACAATTTTGTGATTTACAGAACTA 59.199 33.333 0.00 0.00 42.43 2.24
3222 3444 6.258068 ACCGAAAGCACAGATAAATTACTAGC 59.742 38.462 0.00 0.00 0.00 3.42
3347 3600 5.491982 CTTGCTACCTATCATACCCATTCC 58.508 45.833 0.00 0.00 0.00 3.01
3370 3623 6.219302 AGTTATACACGTTGTGTTGTTAGC 57.781 37.500 8.00 1.65 45.08 3.09
3371 3624 7.584847 CCAAAGTTATACACGTTGTGTTGTTAG 59.415 37.037 8.00 0.00 45.08 2.34
3585 3846 2.902608 AGTCATAGACCCAGACACCAA 58.097 47.619 0.00 0.00 34.80 3.67
3586 3847 2.623418 AGTCATAGACCCAGACACCA 57.377 50.000 0.00 0.00 34.80 4.17
3692 3955 3.986277 AGCCAAAGAAAATTCAGCACAG 58.014 40.909 0.00 0.00 0.00 3.66
3734 3997 8.543862 TGCAGCATAGAACTAATATGATCAAG 57.456 34.615 0.00 0.00 33.30 3.02
3807 4070 1.486310 TCTACATCCTTCGCCAATGCT 59.514 47.619 0.00 0.00 34.43 3.79
4065 4330 2.251409 ATCTGTGCATTCCAGGATCG 57.749 50.000 3.24 0.00 0.00 3.69
4075 4342 9.578576 ACATACAAATATTAGGAATCTGTGCAT 57.421 29.630 0.00 0.00 0.00 3.96
4105 4372 2.235402 CCAGCCTCTGCAAATCCAAAAT 59.765 45.455 0.00 0.00 41.13 1.82
4199 4466 4.643387 AACGTGAGCCCACCAGCC 62.643 66.667 0.00 0.00 40.12 4.85
4238 4505 3.207778 GCTGTATAGTCCAGACTCGAGT 58.792 50.000 20.18 20.18 42.54 4.18
4348 4628 6.360681 CACTGTGAAAAATTGCAGTAACTAGC 59.639 38.462 0.32 0.00 39.82 3.42
4392 4682 2.014128 CCCTGCCAAAGTGGTTATACG 58.986 52.381 0.00 0.00 40.46 3.06
4426 4716 4.458989 GTCACATTGTCTTGGCCAAAGATA 59.541 41.667 20.91 13.94 46.53 1.98
4543 4833 0.253044 CACCACCAGATGACCCGATT 59.747 55.000 0.00 0.00 0.00 3.34
4555 4845 0.930726 AGAAAGGGTTTCCACCACCA 59.069 50.000 0.00 0.00 46.43 4.17
4556 4846 1.686587 CAAGAAAGGGTTTCCACCACC 59.313 52.381 0.00 0.00 46.43 4.61
4557 4847 1.686587 CCAAGAAAGGGTTTCCACCAC 59.313 52.381 0.00 0.00 46.43 4.16
4601 4902 3.357203 TCTCTTGCAACGATCTACTCCT 58.643 45.455 0.00 0.00 0.00 3.69
4643 4944 9.995003 TGGTTAATTTTGACAAATTATGCTTCT 57.005 25.926 0.50 0.00 42.11 2.85
4688 4989 6.434028 TGGGAAGATCCAATTTGTAGTTGAAG 59.566 38.462 0.00 0.00 38.64 3.02
4781 5082 6.808008 AGATAATGACCGCCAATTGATAAG 57.192 37.500 7.12 0.00 0.00 1.73
4792 5093 4.683832 ACTGACACTTAGATAATGACCGC 58.316 43.478 0.00 0.00 0.00 5.68
4793 5094 7.222224 GGTAAACTGACACTTAGATAATGACCG 59.778 40.741 0.00 0.00 0.00 4.79
4890 5191 3.072944 GGATGATGACTAGATTGGCAGC 58.927 50.000 0.00 0.00 0.00 5.25
4895 5196 6.016527 CCCAAACATGGATGATGACTAGATTG 60.017 42.308 0.00 0.00 35.80 2.67
4931 5232 9.607988 TGTCACTACTTTCAAGTTTGAATAGAA 57.392 29.630 16.39 6.61 45.65 2.10
4974 5275 4.595762 TGGGATACTAGCGTAATTGGAC 57.404 45.455 0.00 0.00 0.00 4.02
5017 5318 4.727507 ACGCTAATCAGACATTCAGAGT 57.272 40.909 0.00 0.00 0.00 3.24
5053 5354 3.221771 TGCTTTGTTGTTAGTGGCAGAT 58.778 40.909 0.00 0.00 0.00 2.90
5058 5359 4.370364 ACAGTTGCTTTGTTGTTAGTGG 57.630 40.909 0.00 0.00 0.00 4.00
5064 5365 3.088532 TCCAGAACAGTTGCTTTGTTGT 58.911 40.909 5.92 0.35 38.78 3.32
5068 5369 6.348540 GGTTAGTATCCAGAACAGTTGCTTTG 60.349 42.308 0.00 0.00 0.00 2.77
5069 5370 5.705905 GGTTAGTATCCAGAACAGTTGCTTT 59.294 40.000 0.00 0.00 0.00 3.51
5084 5385 4.439057 TGCGGAAATGTCAGGTTAGTATC 58.561 43.478 0.00 0.00 0.00 2.24
5119 5423 0.108472 CTTCTGGCTCGACATCTGCA 60.108 55.000 0.00 0.00 0.00 4.41
5171 5475 2.203788 AGTTCCCTGACCTCGGCA 60.204 61.111 0.00 0.00 0.00 5.69
5240 5544 2.134287 GGCGAGCCTGTGGAGGATA 61.134 63.158 6.90 0.00 38.46 2.59
5361 5665 8.122306 TCGTATAATCACGGAAAACATACAAG 57.878 34.615 0.00 0.00 42.19 3.16
5363 5667 6.698329 CCTCGTATAATCACGGAAAACATACA 59.302 38.462 0.00 0.00 42.19 2.29
5364 5668 6.145048 CCCTCGTATAATCACGGAAAACATAC 59.855 42.308 0.00 0.00 42.19 2.39
5365 5669 6.183360 ACCCTCGTATAATCACGGAAAACATA 60.183 38.462 0.00 0.00 42.19 2.29
5366 5670 5.054477 CCCTCGTATAATCACGGAAAACAT 58.946 41.667 0.00 0.00 42.19 2.71
5370 5674 3.068590 GGACCCTCGTATAATCACGGAAA 59.931 47.826 0.00 0.00 42.19 3.13
5372 5676 2.233271 GGACCCTCGTATAATCACGGA 58.767 52.381 0.00 0.00 42.19 4.69
5373 5677 1.958579 TGGACCCTCGTATAATCACGG 59.041 52.381 0.00 0.00 42.19 4.94
5374 5678 3.067742 ACTTGGACCCTCGTATAATCACG 59.932 47.826 0.00 0.00 43.28 4.35
5395 5704 6.407202 ACTAGATCAATGTGGTTCCTACAAC 58.593 40.000 0.00 0.00 0.00 3.32
5433 5743 5.106317 AGGAACTATACAAACATGTTTGCGG 60.106 40.000 38.68 28.85 45.72 5.69
5489 5803 6.150318 ACTAGCAACGATCTGTATTAATCGG 58.850 40.000 9.27 0.00 46.87 4.18
5555 5871 1.818674 CCCCCGGTGATTCTCAAAAAG 59.181 52.381 0.00 0.00 0.00 2.27
5653 5984 6.127451 CCCTCATAAACAGGGTTTAATTGTCC 60.127 42.308 5.74 0.00 45.35 4.02
5701 6043 6.296803 TGGTTTCTCTTCTTTTAACCTCTCC 58.703 40.000 0.00 0.00 39.16 3.71
5785 6131 1.561542 CCCCTCATCTACTTGTGCCTT 59.438 52.381 0.00 0.00 0.00 4.35
5827 6173 2.609747 AGGCTACTTGTCAAGTCTGGA 58.390 47.619 21.40 3.70 41.77 3.86
5829 6175 3.921021 CGTTAGGCTACTTGTCAAGTCTG 59.079 47.826 21.40 15.84 41.77 3.51
5842 6188 1.134818 CCTGTGTGATGCGTTAGGCTA 60.135 52.381 0.00 0.00 44.05 3.93
6078 6434 3.595758 GCTGCCCGTGTTGCTGTT 61.596 61.111 0.00 0.00 0.00 3.16
6236 6602 2.124612 CTGGTGCGGATGATGGCA 60.125 61.111 0.00 0.00 36.70 4.92
6276 6646 3.251484 TGAAGATGGAAGTTGAGACCCT 58.749 45.455 0.00 0.00 0.00 4.34
6313 6683 2.556287 GCCAACGTTCAAGGCTCG 59.444 61.111 18.21 0.00 44.92 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.