Multiple sequence alignment - TraesCS7D01G534400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G534400 chr7D 100.000 2822 0 0 1 2822 627084922 627087743 0.000000e+00 5212.0
1 TraesCS7D01G534400 chr7D 85.915 284 30 6 20 294 627062947 627063229 7.640000e-76 294.0
2 TraesCS7D01G534400 chr7D 83.333 264 34 6 17 278 627080196 627080451 4.700000e-58 235.0
3 TraesCS7D01G534400 chr7B 92.992 1270 64 10 724 1986 727639724 727638473 0.000000e+00 1829.0
4 TraesCS7D01G534400 chr7B 92.720 522 34 3 1 518 727640466 727639945 0.000000e+00 750.0
5 TraesCS7D01G534400 chr7B 86.495 311 35 6 17 323 727645369 727645062 4.500000e-88 335.0
6 TraesCS7D01G534400 chr7B 90.187 214 20 1 82 294 727649952 727649739 7.700000e-71 278.0
7 TraesCS7D01G534400 chr7A 92.996 1128 63 7 862 1985 722592004 722593119 0.000000e+00 1631.0
8 TraesCS7D01G534400 chr7A 90.283 494 27 13 27 515 722591363 722591840 6.640000e-176 627.0
9 TraesCS7D01G534400 chr7A 87.912 182 22 0 82 263 722580619 722580800 6.120000e-52 215.0
10 TraesCS7D01G534400 chr7A 91.429 70 4 2 2103 2170 722593142 722593211 8.320000e-16 95.3
11 TraesCS7D01G534400 chr3D 95.652 46 1 1 2061 2106 461663806 461663850 3.900000e-09 73.1
12 TraesCS7D01G534400 chr3A 95.652 46 1 1 2061 2106 528595217 528595261 3.900000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G534400 chr7D 627084922 627087743 2821 False 5212.000000 5212 100.000000 1 2822 1 chr7D.!!$F3 2821
1 TraesCS7D01G534400 chr7B 727638473 727640466 1993 True 1289.500000 1829 92.856000 1 1986 2 chr7B.!!$R3 1985
2 TraesCS7D01G534400 chr7A 722591363 722593211 1848 False 784.433333 1631 91.569333 27 2170 3 chr7A.!!$F2 2143

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
522 528 0.178935 CCCTCCCATCTCTCCCTCTC 60.179 65.0 0.0 0.0 0.0 3.2 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2440 2515 0.03831 CCCTTTCTTTCCCGCTTCCT 59.962 55.0 0.0 0.0 0.0 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 40 7.755591 TCATCAAGTTGCTCAGTTAATCAATC 58.244 34.615 0.00 0.00 0.00 2.67
39 41 7.391275 TCATCAAGTTGCTCAGTTAATCAATCA 59.609 33.333 0.00 0.00 0.00 2.57
56 60 5.748402 TCAATCACAACTGGATGAAGCTAT 58.252 37.500 0.00 0.00 0.00 2.97
65 69 3.743521 TGGATGAAGCTATGCATGTACC 58.256 45.455 10.16 2.44 0.00 3.34
116 122 1.169661 ACGGCCACGAGATTTGCAAA 61.170 50.000 15.44 15.44 44.60 3.68
171 177 1.745115 CCATCGCCGTGGACATTGT 60.745 57.895 0.20 0.00 42.02 2.71
212 218 4.159321 CGATGTAGCCATGATCTGACCTAT 59.841 45.833 0.00 0.00 0.00 2.57
469 475 1.030457 GCCAGCATAGCAAGCATCTT 58.970 50.000 0.00 0.00 0.00 2.40
474 480 2.438763 AGCATAGCAAGCATCTTCTCCT 59.561 45.455 0.00 0.00 0.00 3.69
502 508 1.849097 GTCTTCACCAAAGTCGTCGT 58.151 50.000 0.00 0.00 36.31 4.34
508 514 1.080025 CCAAAGTCGTCGTCCCTCC 60.080 63.158 0.00 0.00 0.00 4.30
509 515 1.080025 CAAAGTCGTCGTCCCTCCC 60.080 63.158 0.00 0.00 0.00 4.30
510 516 1.532316 AAAGTCGTCGTCCCTCCCA 60.532 57.895 0.00 0.00 0.00 4.37
511 517 0.903454 AAAGTCGTCGTCCCTCCCAT 60.903 55.000 0.00 0.00 0.00 4.00
512 518 1.321074 AAGTCGTCGTCCCTCCCATC 61.321 60.000 0.00 0.00 0.00 3.51
513 519 1.753463 GTCGTCGTCCCTCCCATCT 60.753 63.158 0.00 0.00 0.00 2.90
514 520 1.453379 TCGTCGTCCCTCCCATCTC 60.453 63.158 0.00 0.00 0.00 2.75
515 521 1.454111 CGTCGTCCCTCCCATCTCT 60.454 63.158 0.00 0.00 0.00 3.10
516 522 1.448922 CGTCGTCCCTCCCATCTCTC 61.449 65.000 0.00 0.00 0.00 3.20
517 523 1.110518 GTCGTCCCTCCCATCTCTCC 61.111 65.000 0.00 0.00 0.00 3.71
518 524 1.834822 CGTCCCTCCCATCTCTCCC 60.835 68.421 0.00 0.00 0.00 4.30
519 525 1.629297 GTCCCTCCCATCTCTCCCT 59.371 63.158 0.00 0.00 0.00 4.20
520 526 0.471022 GTCCCTCCCATCTCTCCCTC 60.471 65.000 0.00 0.00 0.00 4.30
521 527 0.631998 TCCCTCCCATCTCTCCCTCT 60.632 60.000 0.00 0.00 0.00 3.69
522 528 0.178935 CCCTCCCATCTCTCCCTCTC 60.179 65.000 0.00 0.00 0.00 3.20
523 529 0.539438 CCTCCCATCTCTCCCTCTCG 60.539 65.000 0.00 0.00 0.00 4.04
524 530 0.476338 CTCCCATCTCTCCCTCTCGA 59.524 60.000 0.00 0.00 0.00 4.04
534 540 2.104963 TCTCCCTCTCGATCGATCTCAA 59.895 50.000 19.78 7.69 0.00 3.02
535 541 3.081061 CTCCCTCTCGATCGATCTCAAT 58.919 50.000 19.78 0.00 0.00 2.57
546 552 5.283482 CGATCGATCTCAATTCAGATTCTCG 59.717 44.000 22.43 0.00 32.94 4.04
547 553 5.757850 TCGATCTCAATTCAGATTCTCGA 57.242 39.130 0.11 0.11 32.94 4.04
548 554 6.324561 TCGATCTCAATTCAGATTCTCGAT 57.675 37.500 0.11 0.00 32.94 3.59
553 559 5.067805 TCTCAATTCAGATTCTCGATTCGGA 59.932 40.000 6.18 0.00 0.00 4.55
566 572 2.816672 CGATTCGGAGAGATCTGGATCA 59.183 50.000 0.00 0.00 40.22 2.92
570 576 1.067000 CGGAGAGATCTGGATCATGCC 60.067 57.143 0.00 8.70 40.22 4.40
572 578 2.572556 GGAGAGATCTGGATCATGCCAT 59.427 50.000 0.00 0.00 40.22 4.40
573 579 3.369681 GGAGAGATCTGGATCATGCCATC 60.370 52.174 0.00 1.43 40.22 3.51
574 580 3.248888 AGAGATCTGGATCATGCCATCA 58.751 45.455 0.00 0.00 40.22 3.07
576 582 2.980379 AGATCTGGATCATGCCATCACT 59.020 45.455 12.34 0.00 40.22 3.41
578 584 2.927028 TCTGGATCATGCCATCACTTG 58.073 47.619 0.00 0.00 37.30 3.16
579 585 5.579605 GATCTGGATCATGCCATCACTTGG 61.580 50.000 5.79 0.00 41.80 3.61
590 598 1.779061 ATCACTTGGACCGTTGGCCT 61.779 55.000 3.32 0.00 0.00 5.19
591 599 2.113139 ACTTGGACCGTTGGCCTG 59.887 61.111 3.32 0.00 0.00 4.85
602 610 1.680989 TTGGCCTGAGATCGGACGA 60.681 57.895 3.32 0.00 29.70 4.20
605 613 2.122167 GCCTGAGATCGGACGACCT 61.122 63.158 1.72 0.00 0.00 3.85
608 616 0.748367 CTGAGATCGGACGACCTCCA 60.748 60.000 13.15 1.66 39.39 3.86
611 619 0.183971 AGATCGGACGACCTCCAGAT 59.816 55.000 1.72 0.00 39.39 2.90
612 620 0.312416 GATCGGACGACCTCCAGATG 59.688 60.000 1.72 0.00 39.39 2.90
613 621 1.109920 ATCGGACGACCTCCAGATGG 61.110 60.000 1.72 0.00 39.39 3.51
614 622 2.501610 GGACGACCTCCAGATGGC 59.498 66.667 0.00 0.00 39.21 4.40
615 623 2.501610 GACGACCTCCAGATGGCC 59.498 66.667 0.00 0.00 34.44 5.36
616 624 2.284625 ACGACCTCCAGATGGCCA 60.285 61.111 8.56 8.56 34.44 5.36
617 625 2.187946 CGACCTCCAGATGGCCAC 59.812 66.667 8.16 1.58 34.44 5.01
618 626 2.592308 GACCTCCAGATGGCCACC 59.408 66.667 8.16 0.00 34.44 4.61
619 627 1.997874 GACCTCCAGATGGCCACCT 60.998 63.158 8.16 0.00 34.44 4.00
620 628 2.262774 GACCTCCAGATGGCCACCTG 62.263 65.000 21.54 21.54 34.44 4.00
624 632 3.408229 CAGATGGCCACCTGGAGT 58.592 61.111 20.71 0.00 37.39 3.85
625 633 1.222936 CAGATGGCCACCTGGAGTC 59.777 63.158 20.71 5.59 37.39 3.36
626 634 1.997874 AGATGGCCACCTGGAGTCC 60.998 63.158 8.16 0.73 37.39 3.85
627 635 3.017581 ATGGCCACCTGGAGTCCC 61.018 66.667 8.16 0.00 37.39 4.46
650 658 2.579201 CCCCTGCGTGTACAGAGG 59.421 66.667 0.00 1.97 40.25 3.69
654 662 0.453793 CCTGCGTGTACAGAGGAGAG 59.546 60.000 17.56 7.32 40.25 3.20
657 665 0.179150 GCGTGTACAGAGGAGAGCAG 60.179 60.000 0.00 0.00 0.00 4.24
658 666 1.454201 CGTGTACAGAGGAGAGCAGA 58.546 55.000 0.00 0.00 0.00 4.26
661 669 1.272147 TGTACAGAGGAGAGCAGAGCA 60.272 52.381 0.00 0.00 0.00 4.26
679 687 1.302511 ACCGTTCCTTCGCTGCAAT 60.303 52.632 0.00 0.00 0.00 3.56
699 707 4.816984 GGCTGGCTGGCTGCATCT 62.817 66.667 28.68 0.00 45.15 2.90
700 708 3.518998 GCTGGCTGGCTGCATCTG 61.519 66.667 24.42 6.88 45.15 2.90
701 709 3.518998 CTGGCTGGCTGCATCTGC 61.519 66.667 18.32 9.51 45.15 4.26
711 719 2.713770 GCATCTGCATGTGAGCCG 59.286 61.111 0.00 0.00 41.59 5.52
713 721 0.811219 GCATCTGCATGTGAGCCGTA 60.811 55.000 0.00 0.00 41.59 4.02
715 723 0.528466 ATCTGCATGTGAGCCGTACG 60.528 55.000 8.69 8.69 0.00 3.67
716 724 1.446099 CTGCATGTGAGCCGTACGT 60.446 57.895 15.21 0.00 0.00 3.57
717 725 0.179148 CTGCATGTGAGCCGTACGTA 60.179 55.000 15.21 0.00 0.00 3.57
718 726 0.179148 TGCATGTGAGCCGTACGTAG 60.179 55.000 15.21 0.29 0.00 3.51
719 727 1.480219 GCATGTGAGCCGTACGTAGC 61.480 60.000 15.21 11.45 0.00 3.58
720 728 0.870307 CATGTGAGCCGTACGTAGCC 60.870 60.000 15.21 6.33 0.00 3.93
748 810 0.801872 ACGCGTATGTACACCGTGTA 59.198 50.000 25.59 7.32 42.76 2.90
758 821 1.667830 CACCGTGTACAGTGGCTGG 60.668 63.158 12.86 3.89 35.51 4.85
760 823 2.742372 CGTGTACAGTGGCTGGGC 60.742 66.667 0.00 0.00 35.51 5.36
770 833 2.441532 GGCTGGGCTGCATGTGAT 60.442 61.111 0.50 0.00 34.04 3.06
781 844 0.874607 GCATGTGATCCGTACGTCCC 60.875 60.000 15.21 2.88 0.00 4.46
783 846 0.685131 ATGTGATCCGTACGTCCCCA 60.685 55.000 15.21 6.22 0.00 4.96
807 870 0.600255 CTTCACCGAAGCTTCCGTGT 60.600 55.000 32.71 20.79 37.57 4.49
902 965 1.537562 GCCTATATATACCCCGCACGC 60.538 57.143 0.00 0.00 0.00 5.34
959 1022 3.056393 CAGTGCCATTCCAACATCACAAT 60.056 43.478 0.00 0.00 0.00 2.71
967 1030 6.448852 CATTCCAACATCACAATTCACAAGA 58.551 36.000 0.00 0.00 0.00 3.02
1009 1077 2.889988 CATCGACAATGGCGCCGA 60.890 61.111 23.90 14.57 35.43 5.54
1022 1090 1.010935 GCGCCGACGATGATGATGAT 61.011 55.000 0.00 0.00 43.93 2.45
1119 1187 2.502080 CACGTCGACGACCAGCTC 60.502 66.667 41.52 0.00 43.02 4.09
1233 1301 2.202623 CACTCGTACCTGCCGCTC 60.203 66.667 0.00 0.00 0.00 5.03
1428 1496 3.394836 AAGGACCTCGCTGGCCTC 61.395 66.667 3.32 0.00 40.05 4.70
1477 1545 3.716006 CAACACACGCTGCCTCCG 61.716 66.667 0.00 0.00 0.00 4.63
1746 1817 3.386237 GTGGGCGAGCTGGAGAGT 61.386 66.667 0.00 0.00 0.00 3.24
1839 1912 8.184192 ACAATTTAGCTTCACATTGCTATACAC 58.816 33.333 0.00 0.00 40.81 2.90
1840 1913 7.864108 ATTTAGCTTCACATTGCTATACACA 57.136 32.000 0.00 0.00 40.81 3.72
1841 1914 6.662414 TTAGCTTCACATTGCTATACACAC 57.338 37.500 0.00 0.00 40.81 3.82
1842 1915 3.618594 AGCTTCACATTGCTATACACACG 59.381 43.478 0.00 0.00 37.81 4.49
1843 1916 3.785505 GCTTCACATTGCTATACACACGC 60.786 47.826 0.00 0.00 0.00 5.34
1942 2017 0.538584 TGCCGTGCAGAGATCTCATT 59.461 50.000 24.39 1.76 33.32 2.57
1981 2056 5.857471 ACTGCAATATATTTGGCACACAT 57.143 34.783 6.41 0.00 39.29 3.21
1986 2061 7.273712 TGCAATATATTTGGCACACATCAATT 58.726 30.769 6.41 0.00 39.29 2.32
1987 2062 7.224949 TGCAATATATTTGGCACACATCAATTG 59.775 33.333 6.41 0.00 39.29 2.32
1988 2063 7.307514 GCAATATATTTGGCACACATCAATTGG 60.308 37.037 5.42 0.00 39.29 3.16
1989 2064 2.835580 TTTGGCACACATCAATTGGG 57.164 45.000 5.42 0.95 39.29 4.12
1990 2065 0.321021 TTGGCACACATCAATTGGGC 59.679 50.000 5.42 1.16 39.29 5.36
1991 2066 0.830866 TGGCACACATCAATTGGGCA 60.831 50.000 5.42 3.97 28.72 5.36
1992 2067 0.538118 GGCACACATCAATTGGGCAT 59.462 50.000 5.42 0.00 28.72 4.40
1993 2068 1.647346 GCACACATCAATTGGGCATG 58.353 50.000 5.42 4.88 28.72 4.06
1994 2069 1.066716 GCACACATCAATTGGGCATGT 60.067 47.619 5.42 5.54 28.72 3.21
1995 2070 2.166050 GCACACATCAATTGGGCATGTA 59.834 45.455 5.42 0.00 28.72 2.29
1996 2071 3.368220 GCACACATCAATTGGGCATGTAA 60.368 43.478 5.42 0.00 28.72 2.41
1997 2072 4.175516 CACACATCAATTGGGCATGTAAC 58.824 43.478 5.42 0.00 28.72 2.50
1998 2073 3.195396 ACACATCAATTGGGCATGTAACC 59.805 43.478 5.42 0.00 28.72 2.85
1999 2074 3.195182 CACATCAATTGGGCATGTAACCA 59.805 43.478 5.42 0.00 34.29 3.67
2000 2075 3.195396 ACATCAATTGGGCATGTAACCAC 59.805 43.478 5.42 0.00 36.27 4.16
2001 2076 3.168035 TCAATTGGGCATGTAACCACT 57.832 42.857 5.42 0.00 36.27 4.00
2002 2077 2.824936 TCAATTGGGCATGTAACCACTG 59.175 45.455 5.42 6.74 36.27 3.66
2003 2078 1.851304 ATTGGGCATGTAACCACTGG 58.149 50.000 5.57 0.00 36.27 4.00
2013 2088 4.314740 TGTAACCACTGGTTTGCATTTC 57.685 40.909 18.75 2.96 44.33 2.17
2014 2089 2.908688 AACCACTGGTTTGCATTTCC 57.091 45.000 7.72 0.00 44.33 3.13
2017 2092 1.688197 CCACTGGTTTGCATTTCCTGT 59.312 47.619 8.31 8.31 34.60 4.00
2019 2094 3.383761 CACTGGTTTGCATTTCCTGTTC 58.616 45.455 10.46 0.00 32.58 3.18
2023 2098 4.155709 TGGTTTGCATTTCCTGTTCCATA 58.844 39.130 0.00 0.00 0.00 2.74
2024 2099 4.590647 TGGTTTGCATTTCCTGTTCCATAA 59.409 37.500 0.00 0.00 0.00 1.90
2025 2100 5.248020 TGGTTTGCATTTCCTGTTCCATAAT 59.752 36.000 0.00 0.00 0.00 1.28
2026 2101 6.438741 TGGTTTGCATTTCCTGTTCCATAATA 59.561 34.615 0.00 0.00 0.00 0.98
2027 2102 7.125507 TGGTTTGCATTTCCTGTTCCATAATAT 59.874 33.333 0.00 0.00 0.00 1.28
2028 2103 8.637986 GGTTTGCATTTCCTGTTCCATAATATA 58.362 33.333 0.00 0.00 0.00 0.86
2029 2104 9.463443 GTTTGCATTTCCTGTTCCATAATATAC 57.537 33.333 0.00 0.00 0.00 1.47
2030 2105 8.995027 TTGCATTTCCTGTTCCATAATATACT 57.005 30.769 0.00 0.00 0.00 2.12
2032 2107 9.502091 TGCATTTCCTGTTCCATAATATACTAC 57.498 33.333 0.00 0.00 0.00 2.73
2033 2108 9.726438 GCATTTCCTGTTCCATAATATACTACT 57.274 33.333 0.00 0.00 0.00 2.57
2035 2110 9.726438 ATTTCCTGTTCCATAATATACTACTGC 57.274 33.333 0.00 0.00 0.00 4.40
2036 2111 7.241042 TCCTGTTCCATAATATACTACTGCC 57.759 40.000 0.00 0.00 0.00 4.85
2037 2112 6.212791 TCCTGTTCCATAATATACTACTGCCC 59.787 42.308 0.00 0.00 0.00 5.36
2038 2113 6.368779 TGTTCCATAATATACTACTGCCCC 57.631 41.667 0.00 0.00 0.00 5.80
2039 2114 5.046878 TGTTCCATAATATACTACTGCCCCG 60.047 44.000 0.00 0.00 0.00 5.73
2040 2115 4.938028 TCCATAATATACTACTGCCCCGA 58.062 43.478 0.00 0.00 0.00 5.14
2041 2116 5.525484 TCCATAATATACTACTGCCCCGAT 58.475 41.667 0.00 0.00 0.00 4.18
2042 2117 5.597182 TCCATAATATACTACTGCCCCGATC 59.403 44.000 0.00 0.00 0.00 3.69
2043 2118 5.221461 CCATAATATACTACTGCCCCGATCC 60.221 48.000 0.00 0.00 0.00 3.36
2044 2119 2.984435 TATACTACTGCCCCGATCCA 57.016 50.000 0.00 0.00 0.00 3.41
2045 2120 2.097110 ATACTACTGCCCCGATCCAA 57.903 50.000 0.00 0.00 0.00 3.53
2046 2121 1.868713 TACTACTGCCCCGATCCAAA 58.131 50.000 0.00 0.00 0.00 3.28
2047 2122 1.213296 ACTACTGCCCCGATCCAAAT 58.787 50.000 0.00 0.00 0.00 2.32
2048 2123 1.564348 ACTACTGCCCCGATCCAAATT 59.436 47.619 0.00 0.00 0.00 1.82
2049 2124 2.775384 ACTACTGCCCCGATCCAAATTA 59.225 45.455 0.00 0.00 0.00 1.40
2050 2125 2.818751 ACTGCCCCGATCCAAATTAA 57.181 45.000 0.00 0.00 0.00 1.40
2051 2126 3.312736 ACTGCCCCGATCCAAATTAAT 57.687 42.857 0.00 0.00 0.00 1.40
2052 2127 3.642141 ACTGCCCCGATCCAAATTAATT 58.358 40.909 0.00 0.00 0.00 1.40
2053 2128 3.384467 ACTGCCCCGATCCAAATTAATTG 59.616 43.478 0.39 0.00 38.84 2.32
2054 2129 3.636300 CTGCCCCGATCCAAATTAATTGA 59.364 43.478 0.39 0.00 41.85 2.57
2055 2130 3.383185 TGCCCCGATCCAAATTAATTGAC 59.617 43.478 0.39 0.00 41.85 3.18
2056 2131 3.550030 GCCCCGATCCAAATTAATTGACG 60.550 47.826 0.39 4.11 41.85 4.35
2057 2132 3.630312 CCCCGATCCAAATTAATTGACGT 59.370 43.478 0.39 0.00 41.85 4.34
2058 2133 4.261031 CCCCGATCCAAATTAATTGACGTC 60.261 45.833 9.11 9.11 41.85 4.34
2059 2134 4.261031 CCCGATCCAAATTAATTGACGTCC 60.261 45.833 14.12 0.00 41.85 4.79
2060 2135 4.334203 CCGATCCAAATTAATTGACGTCCA 59.666 41.667 14.12 1.38 41.85 4.02
2061 2136 5.163703 CCGATCCAAATTAATTGACGTCCAA 60.164 40.000 14.12 7.96 41.85 3.53
2062 2137 5.965334 CGATCCAAATTAATTGACGTCCAAG 59.035 40.000 14.12 0.00 41.85 3.61
2063 2138 6.403200 CGATCCAAATTAATTGACGTCCAAGT 60.403 38.462 14.12 9.24 41.85 3.16
2064 2139 6.642707 TCCAAATTAATTGACGTCCAAGTT 57.357 33.333 14.12 4.80 41.85 2.66
2065 2140 6.442952 TCCAAATTAATTGACGTCCAAGTTG 58.557 36.000 14.12 15.41 41.85 3.16
2066 2141 6.039941 TCCAAATTAATTGACGTCCAAGTTGT 59.960 34.615 14.12 0.00 41.85 3.32
2067 2142 7.228906 TCCAAATTAATTGACGTCCAAGTTGTA 59.771 33.333 14.12 2.43 41.85 2.41
2068 2143 7.325097 CCAAATTAATTGACGTCCAAGTTGTAC 59.675 37.037 14.12 0.00 41.85 2.90
2069 2144 7.739498 AATTAATTGACGTCCAAGTTGTACT 57.261 32.000 14.12 0.00 38.31 2.73
2070 2145 8.836268 AATTAATTGACGTCCAAGTTGTACTA 57.164 30.769 14.12 0.00 38.31 1.82
2071 2146 7.878477 TTAATTGACGTCCAAGTTGTACTAG 57.122 36.000 14.12 0.00 38.31 2.57
2072 2147 5.717078 ATTGACGTCCAAGTTGTACTAGA 57.283 39.130 14.12 0.00 38.31 2.43
2073 2148 4.761235 TGACGTCCAAGTTGTACTAGAG 57.239 45.455 14.12 0.00 0.00 2.43
2074 2149 3.057736 TGACGTCCAAGTTGTACTAGAGC 60.058 47.826 14.12 0.00 0.00 4.09
2075 2150 3.155501 ACGTCCAAGTTGTACTAGAGCT 58.844 45.455 0.00 0.00 0.00 4.09
2076 2151 3.057456 ACGTCCAAGTTGTACTAGAGCTG 60.057 47.826 0.00 0.00 0.00 4.24
2077 2152 3.254892 GTCCAAGTTGTACTAGAGCTGC 58.745 50.000 0.00 0.00 0.00 5.25
2078 2153 2.094700 TCCAAGTTGTACTAGAGCTGCG 60.095 50.000 0.00 0.00 0.00 5.18
2079 2154 2.352814 CCAAGTTGTACTAGAGCTGCGT 60.353 50.000 0.00 0.00 0.00 5.24
2080 2155 2.917971 CAAGTTGTACTAGAGCTGCGTC 59.082 50.000 0.00 0.00 0.00 5.19
2081 2156 2.160205 AGTTGTACTAGAGCTGCGTCA 58.840 47.619 0.00 0.00 0.00 4.35
2082 2157 2.557056 AGTTGTACTAGAGCTGCGTCAA 59.443 45.455 0.00 0.00 0.00 3.18
2083 2158 3.193691 AGTTGTACTAGAGCTGCGTCAAT 59.806 43.478 0.00 0.00 0.00 2.57
2084 2159 3.868757 TGTACTAGAGCTGCGTCAATT 57.131 42.857 0.00 0.00 0.00 2.32
2085 2160 4.976224 TGTACTAGAGCTGCGTCAATTA 57.024 40.909 0.00 0.00 0.00 1.40
2086 2161 5.319140 TGTACTAGAGCTGCGTCAATTAA 57.681 39.130 0.00 0.00 0.00 1.40
2087 2162 5.902681 TGTACTAGAGCTGCGTCAATTAAT 58.097 37.500 0.00 0.00 0.00 1.40
2088 2163 6.338146 TGTACTAGAGCTGCGTCAATTAATT 58.662 36.000 0.00 0.00 0.00 1.40
2089 2164 6.816640 TGTACTAGAGCTGCGTCAATTAATTT 59.183 34.615 0.00 0.00 0.00 1.82
2090 2165 6.743575 ACTAGAGCTGCGTCAATTAATTTT 57.256 33.333 0.00 0.00 0.00 1.82
2091 2166 6.546395 ACTAGAGCTGCGTCAATTAATTTTG 58.454 36.000 0.00 0.00 0.00 2.44
2092 2167 4.737054 AGAGCTGCGTCAATTAATTTTGG 58.263 39.130 0.00 0.00 0.00 3.28
2093 2168 4.458989 AGAGCTGCGTCAATTAATTTTGGA 59.541 37.500 0.00 0.00 0.00 3.53
2094 2169 5.126061 AGAGCTGCGTCAATTAATTTTGGAT 59.874 36.000 0.00 0.00 0.00 3.41
2095 2170 5.343249 AGCTGCGTCAATTAATTTTGGATC 58.657 37.500 0.00 0.00 0.00 3.36
2096 2171 5.101628 GCTGCGTCAATTAATTTTGGATCA 58.898 37.500 0.00 0.00 0.00 2.92
2097 2172 5.230726 GCTGCGTCAATTAATTTTGGATCAG 59.769 40.000 0.00 6.46 0.00 2.90
2098 2173 6.507958 TGCGTCAATTAATTTTGGATCAGA 57.492 33.333 0.00 0.00 0.00 3.27
2099 2174 6.554419 TGCGTCAATTAATTTTGGATCAGAG 58.446 36.000 0.00 0.00 0.00 3.35
2100 2175 5.973565 GCGTCAATTAATTTTGGATCAGAGG 59.026 40.000 0.00 0.00 0.00 3.69
2101 2176 6.498304 CGTCAATTAATTTTGGATCAGAGGG 58.502 40.000 0.00 0.00 0.00 4.30
2140 2215 2.061028 CGAAAGCTTTGATGTTTGCCC 58.939 47.619 18.30 0.00 0.00 5.36
2153 2228 1.872952 GTTTGCCCCAAATTTCAGTGC 59.127 47.619 0.00 0.00 35.74 4.40
2158 2233 1.901159 CCCCAAATTTCAGTGCCATCA 59.099 47.619 0.00 0.00 0.00 3.07
2161 2236 4.345837 CCCCAAATTTCAGTGCCATCATAT 59.654 41.667 0.00 0.00 0.00 1.78
2163 2238 5.987347 CCCAAATTTCAGTGCCATCATATTC 59.013 40.000 0.00 0.00 0.00 1.75
2164 2239 6.407187 CCCAAATTTCAGTGCCATCATATTCA 60.407 38.462 0.00 0.00 0.00 2.57
2166 2241 7.262772 CAAATTTCAGTGCCATCATATTCACT 58.737 34.615 0.00 0.00 40.08 3.41
2167 2242 7.414222 AATTTCAGTGCCATCATATTCACTT 57.586 32.000 0.00 0.00 37.66 3.16
2168 2243 6.441093 TTTCAGTGCCATCATATTCACTTC 57.559 37.500 0.00 0.00 37.66 3.01
2169 2244 5.101648 TCAGTGCCATCATATTCACTTCA 57.898 39.130 0.00 0.00 37.66 3.02
2170 2245 5.687780 TCAGTGCCATCATATTCACTTCAT 58.312 37.500 0.00 0.00 37.66 2.57
2171 2246 5.529800 TCAGTGCCATCATATTCACTTCATG 59.470 40.000 0.00 0.00 37.66 3.07
2172 2247 5.529800 CAGTGCCATCATATTCACTTCATGA 59.470 40.000 0.00 0.00 37.66 3.07
2202 2277 2.810439 TTTTTGCGGGGAACTTCATG 57.190 45.000 0.00 0.00 0.00 3.07
2203 2278 1.988293 TTTTGCGGGGAACTTCATGA 58.012 45.000 0.00 0.00 0.00 3.07
2204 2279 1.988293 TTTGCGGGGAACTTCATGAA 58.012 45.000 8.12 8.12 0.00 2.57
2205 2280 1.988293 TTGCGGGGAACTTCATGAAA 58.012 45.000 9.88 0.00 0.00 2.69
2206 2281 1.988293 TGCGGGGAACTTCATGAAAA 58.012 45.000 9.88 0.00 0.00 2.29
2207 2282 2.524306 TGCGGGGAACTTCATGAAAAT 58.476 42.857 9.88 0.75 0.00 1.82
2208 2283 2.230992 TGCGGGGAACTTCATGAAAATG 59.769 45.455 9.88 0.44 0.00 2.32
2209 2284 2.491693 GCGGGGAACTTCATGAAAATGA 59.508 45.455 9.88 0.00 0.00 2.57
2210 2285 3.131046 GCGGGGAACTTCATGAAAATGAT 59.869 43.478 9.88 0.00 0.00 2.45
2211 2286 4.381932 GCGGGGAACTTCATGAAAATGATT 60.382 41.667 9.88 0.00 0.00 2.57
2212 2287 5.104374 CGGGGAACTTCATGAAAATGATTG 58.896 41.667 9.88 0.00 0.00 2.67
2213 2288 5.105797 CGGGGAACTTCATGAAAATGATTGA 60.106 40.000 9.88 0.00 0.00 2.57
2214 2289 6.101997 GGGGAACTTCATGAAAATGATTGAC 58.898 40.000 9.88 0.00 0.00 3.18
2215 2290 6.295236 GGGGAACTTCATGAAAATGATTGACA 60.295 38.462 9.88 0.00 0.00 3.58
2216 2291 6.587608 GGGAACTTCATGAAAATGATTGACAC 59.412 38.462 9.88 0.00 0.00 3.67
2217 2292 7.147312 GGAACTTCATGAAAATGATTGACACA 58.853 34.615 9.88 0.00 0.00 3.72
2218 2293 7.652909 GGAACTTCATGAAAATGATTGACACAA 59.347 33.333 9.88 0.00 0.00 3.33
2219 2294 8.945481 AACTTCATGAAAATGATTGACACAAA 57.055 26.923 9.88 0.00 0.00 2.83
2220 2295 8.583810 ACTTCATGAAAATGATTGACACAAAG 57.416 30.769 9.88 0.00 0.00 2.77
2221 2296 8.415553 ACTTCATGAAAATGATTGACACAAAGA 58.584 29.630 9.88 0.00 0.00 2.52
2222 2297 9.419297 CTTCATGAAAATGATTGACACAAAGAT 57.581 29.630 9.88 0.00 0.00 2.40
2223 2298 9.767228 TTCATGAAAATGATTGACACAAAGATT 57.233 25.926 5.45 0.00 0.00 2.40
2224 2299 9.767228 TCATGAAAATGATTGACACAAAGATTT 57.233 25.926 0.00 0.00 0.00 2.17
2225 2300 9.805966 CATGAAAATGATTGACACAAAGATTTG 57.194 29.630 3.79 3.79 43.62 2.32
2262 2337 1.750193 ATGTTTACATGGCGTCCTGG 58.250 50.000 0.00 0.00 34.83 4.45
2263 2338 0.398696 TGTTTACATGGCGTCCTGGT 59.601 50.000 0.00 0.00 0.00 4.00
2264 2339 1.624312 TGTTTACATGGCGTCCTGGTA 59.376 47.619 0.00 0.00 0.00 3.25
2265 2340 2.237643 TGTTTACATGGCGTCCTGGTAT 59.762 45.455 0.00 0.00 0.00 2.73
2266 2341 3.275999 GTTTACATGGCGTCCTGGTATT 58.724 45.455 0.00 0.00 0.00 1.89
2267 2342 3.637911 TTACATGGCGTCCTGGTATTT 57.362 42.857 0.00 0.00 0.00 1.40
2268 2343 2.507407 ACATGGCGTCCTGGTATTTT 57.493 45.000 0.00 0.00 0.00 1.82
2269 2344 2.091541 ACATGGCGTCCTGGTATTTTG 58.908 47.619 0.00 0.00 0.00 2.44
2270 2345 1.102978 ATGGCGTCCTGGTATTTTGC 58.897 50.000 0.00 0.00 0.00 3.68
2271 2346 0.250945 TGGCGTCCTGGTATTTTGCA 60.251 50.000 0.00 0.00 0.00 4.08
2272 2347 0.885196 GGCGTCCTGGTATTTTGCAA 59.115 50.000 0.00 0.00 0.00 4.08
2273 2348 1.476488 GGCGTCCTGGTATTTTGCAAT 59.524 47.619 0.00 0.00 0.00 3.56
2274 2349 2.479560 GGCGTCCTGGTATTTTGCAATC 60.480 50.000 0.00 0.00 0.00 2.67
2275 2350 2.163412 GCGTCCTGGTATTTTGCAATCA 59.837 45.455 0.00 0.00 0.00 2.57
2276 2351 3.366883 GCGTCCTGGTATTTTGCAATCAA 60.367 43.478 0.00 0.00 0.00 2.57
2277 2352 4.165779 CGTCCTGGTATTTTGCAATCAAC 58.834 43.478 0.00 0.00 30.75 3.18
2278 2353 4.082787 CGTCCTGGTATTTTGCAATCAACT 60.083 41.667 0.00 0.00 30.75 3.16
2279 2354 5.564651 CGTCCTGGTATTTTGCAATCAACTT 60.565 40.000 0.00 0.00 30.75 2.66
2280 2355 6.223120 GTCCTGGTATTTTGCAATCAACTTT 58.777 36.000 0.00 0.00 30.75 2.66
2281 2356 6.146021 GTCCTGGTATTTTGCAATCAACTTTG 59.854 38.462 0.00 0.00 30.75 2.77
2282 2357 6.041409 TCCTGGTATTTTGCAATCAACTTTGA 59.959 34.615 0.00 0.00 42.14 2.69
2283 2358 6.705381 CCTGGTATTTTGCAATCAACTTTGAA 59.295 34.615 0.00 0.00 41.13 2.69
2284 2359 7.307337 CCTGGTATTTTGCAATCAACTTTGAAC 60.307 37.037 0.00 0.00 41.13 3.18
2285 2360 7.044181 TGGTATTTTGCAATCAACTTTGAACA 58.956 30.769 0.00 0.00 41.13 3.18
2286 2361 7.714377 TGGTATTTTGCAATCAACTTTGAACAT 59.286 29.630 0.00 0.00 41.13 2.71
2287 2362 8.223100 GGTATTTTGCAATCAACTTTGAACATC 58.777 33.333 0.00 0.00 41.13 3.06
2288 2363 7.789273 ATTTTGCAATCAACTTTGAACATCA 57.211 28.000 0.00 0.00 41.13 3.07
2289 2364 7.606858 TTTTGCAATCAACTTTGAACATCAA 57.393 28.000 0.00 0.00 41.13 2.57
2290 2365 7.789273 TTTGCAATCAACTTTGAACATCAAT 57.211 28.000 0.00 0.00 41.13 2.57
2291 2366 7.789273 TTGCAATCAACTTTGAACATCAATT 57.211 28.000 0.00 0.00 41.13 2.32
2292 2367 7.789273 TGCAATCAACTTTGAACATCAATTT 57.211 28.000 0.00 0.00 41.13 1.82
2293 2368 7.853524 TGCAATCAACTTTGAACATCAATTTC 58.146 30.769 0.00 0.00 41.13 2.17
2294 2369 7.041916 TGCAATCAACTTTGAACATCAATTTCC 60.042 33.333 0.00 0.00 41.13 3.13
2295 2370 7.571798 GCAATCAACTTTGAACATCAATTTCCC 60.572 37.037 0.00 0.00 41.13 3.97
2296 2371 5.852827 TCAACTTTGAACATCAATTTCCCC 58.147 37.500 0.00 0.00 36.11 4.81
2297 2372 4.890158 ACTTTGAACATCAATTTCCCCC 57.110 40.909 0.00 0.00 36.11 5.40
2298 2373 3.258123 ACTTTGAACATCAATTTCCCCCG 59.742 43.478 0.00 0.00 36.11 5.73
2299 2374 1.181786 TGAACATCAATTTCCCCCGC 58.818 50.000 0.00 0.00 0.00 6.13
2300 2375 1.181786 GAACATCAATTTCCCCCGCA 58.818 50.000 0.00 0.00 0.00 5.69
2301 2376 1.548269 GAACATCAATTTCCCCCGCAA 59.452 47.619 0.00 0.00 0.00 4.85
2302 2377 1.638529 ACATCAATTTCCCCCGCAAA 58.361 45.000 0.00 0.00 0.00 3.68
2303 2378 1.974236 ACATCAATTTCCCCCGCAAAA 59.026 42.857 0.00 0.00 0.00 2.44
2304 2379 2.370189 ACATCAATTTCCCCCGCAAAAA 59.630 40.909 0.00 0.00 0.00 1.94
2339 2414 9.949174 AAATAAAATTTTGAACATCAGTTTGGC 57.051 25.926 13.76 0.00 38.30 4.52
2340 2415 6.375945 AAAATTTTGAACATCAGTTTGGCC 57.624 33.333 1.75 0.00 38.30 5.36
2341 2416 2.791383 TTTGAACATCAGTTTGGCCG 57.209 45.000 0.00 0.00 38.30 6.13
2342 2417 1.974265 TTGAACATCAGTTTGGCCGA 58.026 45.000 0.00 0.00 38.30 5.54
2343 2418 1.234821 TGAACATCAGTTTGGCCGAC 58.765 50.000 0.00 0.00 38.30 4.79
2344 2419 1.234821 GAACATCAGTTTGGCCGACA 58.765 50.000 11.21 0.00 38.30 4.35
2345 2420 1.606668 GAACATCAGTTTGGCCGACAA 59.393 47.619 11.21 0.00 38.30 3.18
2346 2421 1.909700 ACATCAGTTTGGCCGACAAT 58.090 45.000 11.21 2.39 39.21 2.71
2347 2422 3.066291 ACATCAGTTTGGCCGACAATA 57.934 42.857 11.21 0.00 39.21 1.90
2348 2423 2.747446 ACATCAGTTTGGCCGACAATAC 59.253 45.455 11.21 0.00 39.21 1.89
2349 2424 2.552599 TCAGTTTGGCCGACAATACA 57.447 45.000 11.21 0.00 39.21 2.29
2350 2425 3.066291 TCAGTTTGGCCGACAATACAT 57.934 42.857 11.21 0.00 39.21 2.29
2351 2426 2.746904 TCAGTTTGGCCGACAATACATG 59.253 45.455 11.21 0.00 39.21 3.21
2352 2427 1.472480 AGTTTGGCCGACAATACATGC 59.528 47.619 11.21 0.00 39.21 4.06
2353 2428 1.201181 GTTTGGCCGACAATACATGCA 59.799 47.619 0.00 0.00 39.21 3.96
2354 2429 1.761449 TTGGCCGACAATACATGCAT 58.239 45.000 0.00 0.00 33.18 3.96
2355 2430 1.308047 TGGCCGACAATACATGCATC 58.692 50.000 0.00 0.00 0.00 3.91
2356 2431 1.134128 TGGCCGACAATACATGCATCT 60.134 47.619 0.00 0.00 0.00 2.90
2357 2432 1.949525 GGCCGACAATACATGCATCTT 59.050 47.619 0.00 0.00 0.00 2.40
2358 2433 3.138304 GGCCGACAATACATGCATCTTA 58.862 45.455 0.00 0.00 0.00 2.10
2359 2434 3.058914 GGCCGACAATACATGCATCTTAC 60.059 47.826 0.00 0.00 0.00 2.34
2360 2435 3.559655 GCCGACAATACATGCATCTTACA 59.440 43.478 0.00 0.00 0.00 2.41
2361 2436 4.035091 GCCGACAATACATGCATCTTACAA 59.965 41.667 0.00 0.00 0.00 2.41
2362 2437 5.448496 GCCGACAATACATGCATCTTACAAA 60.448 40.000 0.00 0.00 0.00 2.83
2363 2438 5.965334 CCGACAATACATGCATCTTACAAAC 59.035 40.000 0.00 0.00 0.00 2.93
2364 2439 5.965334 CGACAATACATGCATCTTACAAACC 59.035 40.000 0.00 0.00 0.00 3.27
2365 2440 6.403092 CGACAATACATGCATCTTACAAACCA 60.403 38.462 0.00 0.00 0.00 3.67
2366 2441 7.408756 ACAATACATGCATCTTACAAACCAT 57.591 32.000 0.00 0.00 0.00 3.55
2367 2442 8.518430 ACAATACATGCATCTTACAAACCATA 57.482 30.769 0.00 0.00 0.00 2.74
2368 2443 9.135189 ACAATACATGCATCTTACAAACCATAT 57.865 29.630 0.00 0.00 0.00 1.78
2383 2458 8.458573 ACAAACCATATATATTTTTCAGCCGA 57.541 30.769 0.00 0.00 0.00 5.54
2384 2459 8.349983 ACAAACCATATATATTTTTCAGCCGAC 58.650 33.333 0.00 0.00 0.00 4.79
2385 2460 7.448748 AACCATATATATTTTTCAGCCGACC 57.551 36.000 0.00 0.00 0.00 4.79
2386 2461 6.539173 ACCATATATATTTTTCAGCCGACCA 58.461 36.000 0.00 0.00 0.00 4.02
2387 2462 7.001674 ACCATATATATTTTTCAGCCGACCAA 58.998 34.615 0.00 0.00 0.00 3.67
2388 2463 7.504238 ACCATATATATTTTTCAGCCGACCAAA 59.496 33.333 0.00 0.00 0.00 3.28
2389 2464 8.522830 CCATATATATTTTTCAGCCGACCAAAT 58.477 33.333 0.00 0.00 0.00 2.32
2392 2467 6.767524 ATATTTTTCAGCCGACCAAATACA 57.232 33.333 0.00 0.00 0.00 2.29
2393 2468 5.659440 ATTTTTCAGCCGACCAAATACAT 57.341 34.783 0.00 0.00 0.00 2.29
2394 2469 5.461032 TTTTTCAGCCGACCAAATACATT 57.539 34.783 0.00 0.00 0.00 2.71
2395 2470 5.461032 TTTTCAGCCGACCAAATACATTT 57.539 34.783 0.00 0.00 0.00 2.32
2396 2471 4.695217 TTCAGCCGACCAAATACATTTC 57.305 40.909 0.00 0.00 0.00 2.17
2397 2472 3.680490 TCAGCCGACCAAATACATTTCA 58.320 40.909 0.00 0.00 0.00 2.69
2398 2473 4.075682 TCAGCCGACCAAATACATTTCAA 58.924 39.130 0.00 0.00 0.00 2.69
2399 2474 4.704540 TCAGCCGACCAAATACATTTCAAT 59.295 37.500 0.00 0.00 0.00 2.57
2400 2475 5.184864 TCAGCCGACCAAATACATTTCAATT 59.815 36.000 0.00 0.00 0.00 2.32
2401 2476 6.375736 TCAGCCGACCAAATACATTTCAATTA 59.624 34.615 0.00 0.00 0.00 1.40
2402 2477 7.032580 CAGCCGACCAAATACATTTCAATTAA 58.967 34.615 0.00 0.00 0.00 1.40
2403 2478 7.706179 CAGCCGACCAAATACATTTCAATTAAT 59.294 33.333 0.00 0.00 0.00 1.40
2404 2479 8.908903 AGCCGACCAAATACATTTCAATTAATA 58.091 29.630 0.00 0.00 0.00 0.98
2405 2480 9.522804 GCCGACCAAATACATTTCAATTAATAA 57.477 29.630 0.00 0.00 0.00 1.40
2430 2505 9.590828 AATGACATGATGGGAATATGAATTACA 57.409 29.630 0.00 0.00 0.00 2.41
2431 2506 8.625786 TGACATGATGGGAATATGAATTACAG 57.374 34.615 0.00 0.00 0.00 2.74
2432 2507 8.439172 TGACATGATGGGAATATGAATTACAGA 58.561 33.333 0.00 0.00 0.00 3.41
2433 2508 9.288576 GACATGATGGGAATATGAATTACAGAA 57.711 33.333 0.00 0.00 0.00 3.02
2434 2509 9.818270 ACATGATGGGAATATGAATTACAGAAT 57.182 29.630 0.00 0.00 0.00 2.40
2437 2512 9.865152 TGATGGGAATATGAATTACAGAATGAA 57.135 29.630 0.00 0.00 39.69 2.57
2447 2522 7.919690 TGAATTACAGAATGAATAAGGAAGCG 58.080 34.615 0.00 0.00 39.69 4.68
2448 2523 6.867662 ATTACAGAATGAATAAGGAAGCGG 57.132 37.500 0.00 0.00 39.69 5.52
2449 2524 3.545703 ACAGAATGAATAAGGAAGCGGG 58.454 45.455 0.00 0.00 39.69 6.13
2450 2525 3.199946 ACAGAATGAATAAGGAAGCGGGA 59.800 43.478 0.00 0.00 39.69 5.14
2451 2526 4.199310 CAGAATGAATAAGGAAGCGGGAA 58.801 43.478 0.00 0.00 39.69 3.97
2452 2527 4.640201 CAGAATGAATAAGGAAGCGGGAAA 59.360 41.667 0.00 0.00 39.69 3.13
2453 2528 4.884164 AGAATGAATAAGGAAGCGGGAAAG 59.116 41.667 0.00 0.00 0.00 2.62
2454 2529 3.992943 TGAATAAGGAAGCGGGAAAGA 57.007 42.857 0.00 0.00 0.00 2.52
2455 2530 4.295141 TGAATAAGGAAGCGGGAAAGAA 57.705 40.909 0.00 0.00 0.00 2.52
2456 2531 4.658063 TGAATAAGGAAGCGGGAAAGAAA 58.342 39.130 0.00 0.00 0.00 2.52
2457 2532 4.700213 TGAATAAGGAAGCGGGAAAGAAAG 59.300 41.667 0.00 0.00 0.00 2.62
2458 2533 1.911057 AAGGAAGCGGGAAAGAAAGG 58.089 50.000 0.00 0.00 0.00 3.11
2459 2534 0.038310 AGGAAGCGGGAAAGAAAGGG 59.962 55.000 0.00 0.00 0.00 3.95
2460 2535 0.251209 GGAAGCGGGAAAGAAAGGGT 60.251 55.000 0.00 0.00 0.00 4.34
2461 2536 0.881796 GAAGCGGGAAAGAAAGGGTG 59.118 55.000 0.00 0.00 0.00 4.61
2462 2537 0.185175 AAGCGGGAAAGAAAGGGTGT 59.815 50.000 0.00 0.00 0.00 4.16
2463 2538 0.537371 AGCGGGAAAGAAAGGGTGTG 60.537 55.000 0.00 0.00 0.00 3.82
2464 2539 0.536460 GCGGGAAAGAAAGGGTGTGA 60.536 55.000 0.00 0.00 0.00 3.58
2465 2540 1.523758 CGGGAAAGAAAGGGTGTGAG 58.476 55.000 0.00 0.00 0.00 3.51
2466 2541 1.202770 CGGGAAAGAAAGGGTGTGAGT 60.203 52.381 0.00 0.00 0.00 3.41
2467 2542 2.748465 CGGGAAAGAAAGGGTGTGAGTT 60.748 50.000 0.00 0.00 0.00 3.01
2468 2543 2.623416 GGGAAAGAAAGGGTGTGAGTTG 59.377 50.000 0.00 0.00 0.00 3.16
2469 2544 2.034685 GGAAAGAAAGGGTGTGAGTTGC 59.965 50.000 0.00 0.00 0.00 4.17
2470 2545 2.435372 AAGAAAGGGTGTGAGTTGCA 57.565 45.000 0.00 0.00 0.00 4.08
2471 2546 2.435372 AGAAAGGGTGTGAGTTGCAA 57.565 45.000 0.00 0.00 0.00 4.08
2472 2547 2.733956 AGAAAGGGTGTGAGTTGCAAA 58.266 42.857 0.00 0.00 0.00 3.68
2473 2548 3.096092 AGAAAGGGTGTGAGTTGCAAAA 58.904 40.909 0.00 0.00 0.00 2.44
2474 2549 3.131046 AGAAAGGGTGTGAGTTGCAAAAG 59.869 43.478 0.00 0.00 0.00 2.27
2475 2550 2.143876 AGGGTGTGAGTTGCAAAAGT 57.856 45.000 0.00 0.00 0.00 2.66
2476 2551 2.456577 AGGGTGTGAGTTGCAAAAGTT 58.543 42.857 0.00 0.00 0.00 2.66
2477 2552 2.427095 AGGGTGTGAGTTGCAAAAGTTC 59.573 45.455 0.00 0.00 0.00 3.01
2478 2553 2.165437 GGGTGTGAGTTGCAAAAGTTCA 59.835 45.455 0.00 0.13 0.00 3.18
2479 2554 3.181476 GGGTGTGAGTTGCAAAAGTTCAT 60.181 43.478 0.00 0.00 0.00 2.57
2480 2555 3.798337 GGTGTGAGTTGCAAAAGTTCATG 59.202 43.478 0.00 0.00 0.00 3.07
2481 2556 4.423732 GTGTGAGTTGCAAAAGTTCATGT 58.576 39.130 0.00 0.00 0.00 3.21
2482 2557 4.864247 GTGTGAGTTGCAAAAGTTCATGTT 59.136 37.500 0.00 0.00 0.00 2.71
2483 2558 6.033341 GTGTGAGTTGCAAAAGTTCATGTTA 58.967 36.000 0.00 0.00 0.00 2.41
2484 2559 6.197096 GTGTGAGTTGCAAAAGTTCATGTTAG 59.803 38.462 0.00 0.00 0.00 2.34
2485 2560 6.094742 TGTGAGTTGCAAAAGTTCATGTTAGA 59.905 34.615 0.00 0.00 0.00 2.10
2486 2561 6.634436 GTGAGTTGCAAAAGTTCATGTTAGAG 59.366 38.462 0.00 0.00 0.00 2.43
2487 2562 5.523369 AGTTGCAAAAGTTCATGTTAGAGC 58.477 37.500 0.00 0.00 0.00 4.09
2488 2563 5.300286 AGTTGCAAAAGTTCATGTTAGAGCT 59.700 36.000 0.00 0.00 0.00 4.09
2489 2564 5.772825 TGCAAAAGTTCATGTTAGAGCTT 57.227 34.783 0.00 0.00 40.20 3.74
2490 2565 5.522456 TGCAAAAGTTCATGTTAGAGCTTG 58.478 37.500 0.00 0.00 38.76 4.01
2491 2566 4.919754 GCAAAAGTTCATGTTAGAGCTTGG 59.080 41.667 0.00 0.00 38.76 3.61
2492 2567 5.464168 CAAAAGTTCATGTTAGAGCTTGGG 58.536 41.667 0.00 0.00 38.76 4.12
2493 2568 2.716217 AGTTCATGTTAGAGCTTGGGC 58.284 47.619 0.00 0.00 39.06 5.36
2503 2578 3.455469 GCTTGGGCTCCATGGTGC 61.455 66.667 27.09 27.09 31.53 5.01
2504 2579 2.357836 CTTGGGCTCCATGGTGCT 59.642 61.111 31.69 0.00 35.28 4.40
2505 2580 1.751927 CTTGGGCTCCATGGTGCTC 60.752 63.158 31.69 30.02 35.84 4.26
2506 2581 2.207501 CTTGGGCTCCATGGTGCTCT 62.208 60.000 32.64 0.00 36.22 4.09
2507 2582 1.792757 TTGGGCTCCATGGTGCTCTT 61.793 55.000 32.64 0.00 36.22 2.85
2508 2583 1.000396 GGGCTCCATGGTGCTCTTT 60.000 57.895 31.69 0.00 32.90 2.52
2509 2584 0.613012 GGGCTCCATGGTGCTCTTTT 60.613 55.000 31.69 0.00 32.90 2.27
2510 2585 1.260544 GGCTCCATGGTGCTCTTTTT 58.739 50.000 31.69 0.00 35.28 1.94
2511 2586 2.446435 GGCTCCATGGTGCTCTTTTTA 58.554 47.619 31.69 0.62 35.28 1.52
2512 2587 3.026694 GGCTCCATGGTGCTCTTTTTAT 58.973 45.455 31.69 0.00 35.28 1.40
2513 2588 3.181483 GGCTCCATGGTGCTCTTTTTATG 60.181 47.826 31.69 0.00 35.28 1.90
2514 2589 3.696051 GCTCCATGGTGCTCTTTTTATGA 59.304 43.478 27.58 0.00 0.00 2.15
2515 2590 4.158394 GCTCCATGGTGCTCTTTTTATGAA 59.842 41.667 27.58 0.00 0.00 2.57
2516 2591 5.336690 GCTCCATGGTGCTCTTTTTATGAAA 60.337 40.000 27.58 0.00 0.00 2.69
2517 2592 6.662865 TCCATGGTGCTCTTTTTATGAAAA 57.337 33.333 12.58 0.00 33.86 2.29
2518 2593 7.060383 TCCATGGTGCTCTTTTTATGAAAAA 57.940 32.000 12.58 0.00 37.99 1.94
2683 2758 9.855021 TTTTTCTTTTTCTGTAGCTTATATGCC 57.145 29.630 6.97 0.00 0.00 4.40
2684 2759 8.574251 TTTCTTTTTCTGTAGCTTATATGCCA 57.426 30.769 6.97 0.00 0.00 4.92
2685 2760 8.574251 TTCTTTTTCTGTAGCTTATATGCCAA 57.426 30.769 6.97 0.00 0.00 4.52
2686 2761 8.752005 TCTTTTTCTGTAGCTTATATGCCAAT 57.248 30.769 6.97 0.00 0.00 3.16
2687 2762 9.845740 TCTTTTTCTGTAGCTTATATGCCAATA 57.154 29.630 6.97 0.00 0.00 1.90
2770 2845 8.996024 TTTTTCTCCAATTCTTTCGAAACTTT 57.004 26.923 6.47 0.00 31.91 2.66
2774 2849 9.511144 TTCTCCAATTCTTTCGAAACTTTAAAC 57.489 29.630 6.47 0.00 31.91 2.01
2775 2850 8.899771 TCTCCAATTCTTTCGAAACTTTAAACT 58.100 29.630 6.47 0.00 31.91 2.66
2782 2857 9.940166 TTCTTTCGAAACTTTAAACTATGGTTC 57.060 29.630 6.47 0.00 34.14 3.62
2783 2858 9.333724 TCTTTCGAAACTTTAAACTATGGTTCT 57.666 29.630 6.47 0.00 34.14 3.01
2784 2859 9.595357 CTTTCGAAACTTTAAACTATGGTTCTC 57.405 33.333 6.47 0.00 34.14 2.87
2785 2860 8.665643 TTCGAAACTTTAAACTATGGTTCTCA 57.334 30.769 0.00 0.00 34.14 3.27
2786 2861 8.306680 TCGAAACTTTAAACTATGGTTCTCAG 57.693 34.615 0.00 0.00 34.14 3.35
2787 2862 8.145767 TCGAAACTTTAAACTATGGTTCTCAGA 58.854 33.333 0.00 0.00 34.14 3.27
2788 2863 8.936864 CGAAACTTTAAACTATGGTTCTCAGAT 58.063 33.333 0.00 0.00 34.14 2.90
2820 2895 1.609208 GCTCCAAAAAGCCTCACTCA 58.391 50.000 0.00 0.00 36.22 3.41
2821 2896 1.538950 GCTCCAAAAAGCCTCACTCAG 59.461 52.381 0.00 0.00 36.22 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 5.173664 TGAGCAACTTGATGAGTACATGAG 58.826 41.667 0.00 0.00 37.72 2.90
5 6 5.151297 TGAGCAACTTGATGAGTACATGA 57.849 39.130 0.00 0.00 37.72 3.07
6 7 4.934001 ACTGAGCAACTTGATGAGTACATG 59.066 41.667 0.00 0.00 37.72 3.21
7 8 5.157940 ACTGAGCAACTTGATGAGTACAT 57.842 39.130 0.00 0.00 37.72 2.29
8 9 4.607293 ACTGAGCAACTTGATGAGTACA 57.393 40.909 0.00 0.00 37.72 2.90
21 23 6.882610 AGTTGTGATTGATTAACTGAGCAA 57.117 33.333 0.00 0.00 32.56 3.91
38 40 3.011818 TGCATAGCTTCATCCAGTTGTG 58.988 45.455 0.00 0.00 0.00 3.33
39 41 3.354948 TGCATAGCTTCATCCAGTTGT 57.645 42.857 0.00 0.00 0.00 3.32
56 60 5.046288 TGGATACATTCATGGTACATGCA 57.954 39.130 4.42 0.00 44.75 3.96
171 177 3.068691 CTCGACCTTCCGGCCTCA 61.069 66.667 0.00 0.00 0.00 3.86
212 218 2.300152 CACTTGAACAGCCTGTCTCCTA 59.700 50.000 0.00 0.00 0.00 2.94
299 305 1.154035 GTACATTTGCGTGCCCAGC 60.154 57.895 0.00 0.00 0.00 4.85
502 508 0.631998 AGAGGGAGAGATGGGAGGGA 60.632 60.000 0.00 0.00 0.00 4.20
508 514 1.164411 CGATCGAGAGGGAGAGATGG 58.836 60.000 10.26 0.00 0.00 3.51
509 515 2.177394 TCGATCGAGAGGGAGAGATG 57.823 55.000 15.15 0.00 0.00 2.90
510 516 2.571653 AGATCGATCGAGAGGGAGAGAT 59.428 50.000 23.84 1.76 0.00 2.75
511 517 1.974957 AGATCGATCGAGAGGGAGAGA 59.025 52.381 23.84 0.00 0.00 3.10
512 518 2.289382 TGAGATCGATCGAGAGGGAGAG 60.289 54.545 23.84 0.00 0.00 3.20
513 519 1.694696 TGAGATCGATCGAGAGGGAGA 59.305 52.381 23.84 0.00 0.00 3.71
514 520 2.177394 TGAGATCGATCGAGAGGGAG 57.823 55.000 23.84 0.00 0.00 4.30
515 521 2.640316 TTGAGATCGATCGAGAGGGA 57.360 50.000 23.84 6.57 0.00 4.20
516 522 3.254411 TGAATTGAGATCGATCGAGAGGG 59.746 47.826 23.84 0.00 0.00 4.30
517 523 4.215185 TCTGAATTGAGATCGATCGAGAGG 59.785 45.833 23.84 6.95 0.00 3.69
518 524 5.355467 TCTGAATTGAGATCGATCGAGAG 57.645 43.478 23.84 9.74 0.00 3.20
519 525 5.956068 ATCTGAATTGAGATCGATCGAGA 57.044 39.130 23.84 11.04 0.00 4.04
520 526 6.380995 AGAATCTGAATTGAGATCGATCGAG 58.619 40.000 23.84 5.67 31.07 4.04
521 527 6.324561 AGAATCTGAATTGAGATCGATCGA 57.675 37.500 21.86 21.86 31.07 3.59
522 528 5.283482 CGAGAATCTGAATTGAGATCGATCG 59.717 44.000 19.33 9.36 31.07 3.69
523 529 6.377780 TCGAGAATCTGAATTGAGATCGATC 58.622 40.000 17.91 17.91 31.07 3.69
524 530 6.324561 TCGAGAATCTGAATTGAGATCGAT 57.675 37.500 12.97 0.00 31.07 3.59
534 540 4.824537 TCTCTCCGAATCGAGAATCTGAAT 59.175 41.667 3.36 0.00 38.41 2.57
535 541 4.200092 TCTCTCCGAATCGAGAATCTGAA 58.800 43.478 3.36 0.00 38.41 3.02
546 552 4.746729 CATGATCCAGATCTCTCCGAATC 58.253 47.826 8.99 0.00 38.60 2.52
547 553 3.055963 GCATGATCCAGATCTCTCCGAAT 60.056 47.826 8.99 0.00 38.60 3.34
548 554 2.298446 GCATGATCCAGATCTCTCCGAA 59.702 50.000 8.99 0.00 38.60 4.30
553 559 3.008157 GTGATGGCATGATCCAGATCTCT 59.992 47.826 3.81 0.00 39.89 3.10
570 576 1.586154 GGCCAACGGTCCAAGTGATG 61.586 60.000 0.00 0.00 0.00 3.07
572 578 2.112297 GGCCAACGGTCCAAGTGA 59.888 61.111 0.00 0.00 0.00 3.41
573 579 2.113139 AGGCCAACGGTCCAAGTG 59.887 61.111 5.01 0.00 0.00 3.16
574 580 2.113139 CAGGCCAACGGTCCAAGT 59.887 61.111 5.01 0.00 0.00 3.16
576 582 1.488705 ATCTCAGGCCAACGGTCCAA 61.489 55.000 5.01 0.00 0.00 3.53
578 584 1.153349 GATCTCAGGCCAACGGTCC 60.153 63.158 5.01 0.00 0.00 4.46
579 585 1.519455 CGATCTCAGGCCAACGGTC 60.519 63.158 5.01 0.00 0.00 4.79
602 610 2.125912 AGGTGGCCATCTGGAGGT 59.874 61.111 20.51 0.00 37.39 3.85
608 616 1.997874 GGACTCCAGGTGGCCATCT 60.998 63.158 14.53 14.53 34.44 2.90
636 644 0.179150 GCTCTCCTCTGTACACGCAG 60.179 60.000 0.00 0.00 37.81 5.18
640 648 1.134175 GCTCTGCTCTCCTCTGTACAC 59.866 57.143 0.00 0.00 0.00 2.90
643 651 1.468985 GTGCTCTGCTCTCCTCTGTA 58.531 55.000 0.00 0.00 0.00 2.74
646 654 2.051518 CGGTGCTCTGCTCTCCTCT 61.052 63.158 0.00 0.00 0.00 3.69
650 658 1.446966 GGAACGGTGCTCTGCTCTC 60.447 63.158 0.00 0.00 0.00 3.20
654 662 2.383527 CGAAGGAACGGTGCTCTGC 61.384 63.158 0.00 0.00 0.00 4.26
657 665 2.048127 AGCGAAGGAACGGTGCTC 60.048 61.111 0.00 0.00 42.25 4.26
661 669 1.302511 ATTGCAGCGAAGGAACGGT 60.303 52.632 0.00 0.00 44.63 4.83
684 692 3.518998 GCAGATGCAGCCAGCCAG 61.519 66.667 0.00 0.00 44.83 4.85
698 706 0.179148 TACGTACGGCTCACATGCAG 60.179 55.000 21.06 0.00 34.04 4.41
699 707 0.179148 CTACGTACGGCTCACATGCA 60.179 55.000 21.06 0.00 34.04 3.96
700 708 1.480219 GCTACGTACGGCTCACATGC 61.480 60.000 21.06 7.62 0.00 4.06
701 709 0.870307 GGCTACGTACGGCTCACATG 60.870 60.000 21.06 0.00 0.00 3.21
702 710 1.436336 GGCTACGTACGGCTCACAT 59.564 57.895 21.06 0.00 0.00 3.21
703 711 2.879907 GGCTACGTACGGCTCACA 59.120 61.111 21.06 0.00 0.00 3.58
704 712 2.277756 CGGCTACGTACGGCTCAC 60.278 66.667 21.06 4.77 34.81 3.51
726 788 1.802314 CGGTGTACATACGCGTGCA 60.802 57.895 24.59 2.06 37.57 4.57
748 810 3.975591 ATGCAGCCCAGCCACTGT 61.976 61.111 0.00 0.00 36.26 3.55
753 815 2.441532 ATCACATGCAGCCCAGCC 60.442 61.111 0.00 0.00 0.00 4.85
755 817 2.184830 CGGATCACATGCAGCCCAG 61.185 63.158 0.00 0.00 0.00 4.45
758 821 1.490693 CGTACGGATCACATGCAGCC 61.491 60.000 7.57 0.00 0.00 4.85
760 823 1.200483 GACGTACGGATCACATGCAG 58.800 55.000 21.06 0.00 0.00 4.41
770 833 0.106369 AGATGATGGGGACGTACGGA 60.106 55.000 21.06 0.00 0.00 4.69
781 844 2.322355 AGCTTCGGTGAAGATGATGG 57.678 50.000 10.58 0.00 41.71 3.51
783 846 2.739932 CGGAAGCTTCGGTGAAGATGAT 60.740 50.000 22.25 0.00 41.71 2.45
902 965 1.003355 ATGAGTGGGGAAGTGTGCG 60.003 57.895 0.00 0.00 0.00 5.34
911 974 1.109920 AGGTCGATCGATGAGTGGGG 61.110 60.000 22.50 0.00 0.00 4.96
959 1022 4.452455 GCTAGCTAGCTTTTGTCTTGTGAA 59.548 41.667 33.71 0.00 45.62 3.18
1009 1077 1.426423 GCGCTCATCATCATCATCGT 58.574 50.000 0.00 0.00 0.00 3.73
1746 1817 0.603569 GGAACACCTTCTCGCTCTCA 59.396 55.000 0.00 0.00 0.00 3.27
1839 1912 3.811722 AATCTTGTGTGTGTATGCGTG 57.188 42.857 0.00 0.00 0.00 5.34
1840 1913 6.494893 AATTAATCTTGTGTGTGTATGCGT 57.505 33.333 0.00 0.00 0.00 5.24
1841 1914 8.387354 TCTTAATTAATCTTGTGTGTGTATGCG 58.613 33.333 0.00 0.00 0.00 4.73
1842 1915 9.708222 CTCTTAATTAATCTTGTGTGTGTATGC 57.292 33.333 0.00 0.00 0.00 3.14
1933 2008 6.642733 TCCTTTTACCCTGAAATGAGATCT 57.357 37.500 0.00 0.00 0.00 2.75
1942 2017 5.249780 TGCAGTAATCCTTTTACCCTGAA 57.750 39.130 0.00 0.00 0.00 3.02
1981 2056 2.824936 CAGTGGTTACATGCCCAATTGA 59.175 45.455 7.12 0.00 31.17 2.57
1986 2061 0.480690 AACCAGTGGTTACATGCCCA 59.519 50.000 26.34 0.00 44.94 5.36
1987 2062 1.272212 CAAACCAGTGGTTACATGCCC 59.728 52.381 27.62 0.00 46.20 5.36
1988 2063 1.336795 GCAAACCAGTGGTTACATGCC 60.337 52.381 28.62 16.53 46.20 4.40
1989 2064 1.339610 TGCAAACCAGTGGTTACATGC 59.660 47.619 30.67 30.67 46.20 4.06
1990 2065 3.940209 ATGCAAACCAGTGGTTACATG 57.060 42.857 29.36 23.97 46.20 3.21
1991 2066 4.262420 GGAAATGCAAACCAGTGGTTACAT 60.262 41.667 27.62 26.99 46.20 2.29
1992 2067 3.068873 GGAAATGCAAACCAGTGGTTACA 59.931 43.478 27.62 26.10 46.20 2.41
1993 2068 3.320826 AGGAAATGCAAACCAGTGGTTAC 59.679 43.478 27.62 21.71 46.20 2.50
1994 2069 3.320541 CAGGAAATGCAAACCAGTGGTTA 59.679 43.478 27.62 13.15 46.20 2.85
1996 2071 1.688197 CAGGAAATGCAAACCAGTGGT 59.312 47.619 9.70 9.70 37.65 4.16
1997 2072 1.688197 ACAGGAAATGCAAACCAGTGG 59.312 47.619 7.91 7.91 0.00 4.00
1998 2073 3.383761 GAACAGGAAATGCAAACCAGTG 58.616 45.455 0.00 0.00 0.00 3.66
1999 2074 2.365293 GGAACAGGAAATGCAAACCAGT 59.635 45.455 0.00 0.00 0.00 4.00
2000 2075 2.364970 TGGAACAGGAAATGCAAACCAG 59.635 45.455 0.00 0.00 0.00 4.00
2001 2076 2.392662 TGGAACAGGAAATGCAAACCA 58.607 42.857 0.00 0.00 0.00 3.67
2017 2092 5.335261 TCGGGGCAGTAGTATATTATGGAA 58.665 41.667 0.00 0.00 0.00 3.53
2019 2094 5.221461 GGATCGGGGCAGTAGTATATTATGG 60.221 48.000 0.00 0.00 0.00 2.74
2023 2098 3.786553 TGGATCGGGGCAGTAGTATATT 58.213 45.455 0.00 0.00 0.00 1.28
2024 2099 3.468071 TGGATCGGGGCAGTAGTATAT 57.532 47.619 0.00 0.00 0.00 0.86
2025 2100 2.984435 TGGATCGGGGCAGTAGTATA 57.016 50.000 0.00 0.00 0.00 1.47
2026 2101 2.097110 TTGGATCGGGGCAGTAGTAT 57.903 50.000 0.00 0.00 0.00 2.12
2027 2102 1.868713 TTTGGATCGGGGCAGTAGTA 58.131 50.000 0.00 0.00 0.00 1.82
2028 2103 1.213296 ATTTGGATCGGGGCAGTAGT 58.787 50.000 0.00 0.00 0.00 2.73
2029 2104 2.348411 AATTTGGATCGGGGCAGTAG 57.652 50.000 0.00 0.00 0.00 2.57
2030 2105 3.935818 TTAATTTGGATCGGGGCAGTA 57.064 42.857 0.00 0.00 0.00 2.74
2031 2106 2.818751 TTAATTTGGATCGGGGCAGT 57.181 45.000 0.00 0.00 0.00 4.40
2032 2107 3.636300 TCAATTAATTTGGATCGGGGCAG 59.364 43.478 0.00 0.00 35.92 4.85
2033 2108 3.383185 GTCAATTAATTTGGATCGGGGCA 59.617 43.478 0.00 0.00 35.92 5.36
2034 2109 3.550030 CGTCAATTAATTTGGATCGGGGC 60.550 47.826 0.00 0.00 35.92 5.80
2035 2110 3.630312 ACGTCAATTAATTTGGATCGGGG 59.370 43.478 0.00 0.00 35.92 5.73
2036 2111 4.261031 GGACGTCAATTAATTTGGATCGGG 60.261 45.833 18.91 0.00 35.92 5.14
2037 2112 4.334203 TGGACGTCAATTAATTTGGATCGG 59.666 41.667 18.91 0.00 35.92 4.18
2038 2113 5.478233 TGGACGTCAATTAATTTGGATCG 57.522 39.130 18.91 4.12 35.92 3.69
2039 2114 6.852664 ACTTGGACGTCAATTAATTTGGATC 58.147 36.000 18.91 0.00 35.92 3.36
2040 2115 6.834168 ACTTGGACGTCAATTAATTTGGAT 57.166 33.333 18.91 0.00 35.92 3.41
2041 2116 6.039941 ACAACTTGGACGTCAATTAATTTGGA 59.960 34.615 18.91 0.00 35.92 3.53
2042 2117 6.212955 ACAACTTGGACGTCAATTAATTTGG 58.787 36.000 18.91 0.00 35.92 3.28
2043 2118 8.073768 AGTACAACTTGGACGTCAATTAATTTG 58.926 33.333 18.91 16.73 36.00 2.32
2044 2119 8.161699 AGTACAACTTGGACGTCAATTAATTT 57.838 30.769 18.91 4.66 36.00 1.82
2045 2120 7.739498 AGTACAACTTGGACGTCAATTAATT 57.261 32.000 18.91 0.00 36.00 1.40
2046 2121 8.308931 TCTAGTACAACTTGGACGTCAATTAAT 58.691 33.333 18.91 0.00 36.00 1.40
2047 2122 7.660112 TCTAGTACAACTTGGACGTCAATTAA 58.340 34.615 18.91 5.81 36.00 1.40
2048 2123 7.218228 TCTAGTACAACTTGGACGTCAATTA 57.782 36.000 18.91 0.00 36.00 1.40
2049 2124 6.092955 TCTAGTACAACTTGGACGTCAATT 57.907 37.500 18.91 2.43 36.00 2.32
2050 2125 5.710984 CTCTAGTACAACTTGGACGTCAAT 58.289 41.667 18.91 0.00 36.00 2.57
2051 2126 4.558095 GCTCTAGTACAACTTGGACGTCAA 60.558 45.833 18.91 2.10 36.00 3.18
2052 2127 3.057736 GCTCTAGTACAACTTGGACGTCA 60.058 47.826 18.91 0.27 36.00 4.35
2053 2128 3.190953 AGCTCTAGTACAACTTGGACGTC 59.809 47.826 7.13 7.13 36.00 4.34
2054 2129 3.057456 CAGCTCTAGTACAACTTGGACGT 60.057 47.826 0.00 0.00 36.00 4.34
2055 2130 3.502920 CAGCTCTAGTACAACTTGGACG 58.497 50.000 0.00 0.00 36.00 4.79
2056 2131 3.254892 GCAGCTCTAGTACAACTTGGAC 58.745 50.000 0.00 0.00 0.00 4.02
2057 2132 2.094700 CGCAGCTCTAGTACAACTTGGA 60.095 50.000 0.00 0.00 0.00 3.53
2058 2133 2.263077 CGCAGCTCTAGTACAACTTGG 58.737 52.381 0.00 0.00 0.00 3.61
2059 2134 2.917971 GACGCAGCTCTAGTACAACTTG 59.082 50.000 0.00 0.00 0.00 3.16
2060 2135 2.557056 TGACGCAGCTCTAGTACAACTT 59.443 45.455 0.00 0.00 0.00 2.66
2061 2136 2.160205 TGACGCAGCTCTAGTACAACT 58.840 47.619 0.00 0.00 0.00 3.16
2062 2137 2.631418 TGACGCAGCTCTAGTACAAC 57.369 50.000 0.00 0.00 0.00 3.32
2063 2138 3.868757 ATTGACGCAGCTCTAGTACAA 57.131 42.857 0.00 0.00 0.00 2.41
2064 2139 3.868757 AATTGACGCAGCTCTAGTACA 57.131 42.857 0.00 0.00 0.00 2.90
2065 2140 6.830114 AATTAATTGACGCAGCTCTAGTAC 57.170 37.500 0.00 0.00 0.00 2.73
2066 2141 7.201609 CCAAAATTAATTGACGCAGCTCTAGTA 60.202 37.037 0.39 0.00 31.84 1.82
2067 2142 6.403636 CCAAAATTAATTGACGCAGCTCTAGT 60.404 38.462 0.39 0.00 31.84 2.57
2068 2143 5.967674 CCAAAATTAATTGACGCAGCTCTAG 59.032 40.000 0.39 0.00 31.84 2.43
2069 2144 5.645929 TCCAAAATTAATTGACGCAGCTCTA 59.354 36.000 0.39 0.00 31.84 2.43
2070 2145 4.458989 TCCAAAATTAATTGACGCAGCTCT 59.541 37.500 0.39 0.00 31.84 4.09
2071 2146 4.732784 TCCAAAATTAATTGACGCAGCTC 58.267 39.130 0.39 0.00 31.84 4.09
2072 2147 4.782019 TCCAAAATTAATTGACGCAGCT 57.218 36.364 0.39 0.00 31.84 4.24
2073 2148 5.101628 TGATCCAAAATTAATTGACGCAGC 58.898 37.500 0.39 0.00 31.84 5.25
2074 2149 6.554419 TCTGATCCAAAATTAATTGACGCAG 58.446 36.000 0.39 6.85 31.84 5.18
2075 2150 6.404623 CCTCTGATCCAAAATTAATTGACGCA 60.405 38.462 0.39 0.00 31.84 5.24
2076 2151 5.973565 CCTCTGATCCAAAATTAATTGACGC 59.026 40.000 0.39 0.00 31.84 5.19
2077 2152 6.318648 TCCCTCTGATCCAAAATTAATTGACG 59.681 38.462 0.39 0.00 31.84 4.35
2078 2153 7.340487 ACTCCCTCTGATCCAAAATTAATTGAC 59.660 37.037 0.39 0.00 31.84 3.18
2079 2154 7.413446 ACTCCCTCTGATCCAAAATTAATTGA 58.587 34.615 0.39 0.00 31.84 2.57
2080 2155 7.651027 ACTCCCTCTGATCCAAAATTAATTG 57.349 36.000 0.39 0.00 0.00 2.32
2081 2156 9.942526 AATACTCCCTCTGATCCAAAATTAATT 57.057 29.630 0.00 0.00 0.00 1.40
2082 2157 9.359653 CAATACTCCCTCTGATCCAAAATTAAT 57.640 33.333 0.00 0.00 0.00 1.40
2083 2158 8.556589 TCAATACTCCCTCTGATCCAAAATTAA 58.443 33.333 0.00 0.00 0.00 1.40
2084 2159 8.101309 TCAATACTCCCTCTGATCCAAAATTA 57.899 34.615 0.00 0.00 0.00 1.40
2085 2160 6.973642 TCAATACTCCCTCTGATCCAAAATT 58.026 36.000 0.00 0.00 0.00 1.82
2086 2161 6.581388 TCAATACTCCCTCTGATCCAAAAT 57.419 37.500 0.00 0.00 0.00 1.82
2087 2162 6.387192 TTCAATACTCCCTCTGATCCAAAA 57.613 37.500 0.00 0.00 0.00 2.44
2088 2163 6.581388 ATTCAATACTCCCTCTGATCCAAA 57.419 37.500 0.00 0.00 0.00 3.28
2089 2164 6.581388 AATTCAATACTCCCTCTGATCCAA 57.419 37.500 0.00 0.00 0.00 3.53
2090 2165 7.878621 ATAATTCAATACTCCCTCTGATCCA 57.121 36.000 0.00 0.00 0.00 3.41
2134 2209 1.202746 GGCACTGAAATTTGGGGCAAA 60.203 47.619 14.37 0.00 37.75 3.68
2140 2215 6.477688 GTGAATATGATGGCACTGAAATTTGG 59.522 38.462 0.00 0.00 0.00 3.28
2183 2258 2.311463 TCATGAAGTTCCCCGCAAAAA 58.689 42.857 0.00 0.00 0.00 1.94
2184 2259 1.988293 TCATGAAGTTCCCCGCAAAA 58.012 45.000 0.00 0.00 0.00 2.44
2185 2260 1.988293 TTCATGAAGTTCCCCGCAAA 58.012 45.000 3.38 0.00 0.00 3.68
2186 2261 1.988293 TTTCATGAAGTTCCCCGCAA 58.012 45.000 8.41 0.00 0.00 4.85
2187 2262 1.988293 TTTTCATGAAGTTCCCCGCA 58.012 45.000 8.41 0.00 0.00 5.69
2188 2263 2.491693 TCATTTTCATGAAGTTCCCCGC 59.508 45.455 8.41 0.00 36.41 6.13
2189 2264 4.989279 ATCATTTTCATGAAGTTCCCCG 57.011 40.909 8.41 0.00 42.93 5.73
2190 2265 6.101997 GTCAATCATTTTCATGAAGTTCCCC 58.898 40.000 8.41 0.00 42.93 4.81
2191 2266 6.587608 GTGTCAATCATTTTCATGAAGTTCCC 59.412 38.462 8.41 0.00 42.93 3.97
2192 2267 7.147312 TGTGTCAATCATTTTCATGAAGTTCC 58.853 34.615 8.41 0.00 42.93 3.62
2193 2268 8.578308 TTGTGTCAATCATTTTCATGAAGTTC 57.422 30.769 8.41 0.00 42.93 3.01
2194 2269 8.945481 TTTGTGTCAATCATTTTCATGAAGTT 57.055 26.923 8.41 0.00 42.93 2.66
2195 2270 8.415553 TCTTTGTGTCAATCATTTTCATGAAGT 58.584 29.630 8.41 0.00 42.93 3.01
2196 2271 8.806177 TCTTTGTGTCAATCATTTTCATGAAG 57.194 30.769 8.41 0.00 42.93 3.02
2197 2272 9.767228 AATCTTTGTGTCAATCATTTTCATGAA 57.233 25.926 3.38 3.38 42.93 2.57
2198 2273 9.767228 AAATCTTTGTGTCAATCATTTTCATGA 57.233 25.926 0.00 0.00 43.85 3.07
2199 2274 9.805966 CAAATCTTTGTGTCAATCATTTTCATG 57.194 29.630 0.00 0.00 33.59 3.07
2243 2318 1.004277 ACCAGGACGCCATGTAAACAT 59.996 47.619 0.00 0.00 36.96 2.71
2244 2319 0.398696 ACCAGGACGCCATGTAAACA 59.601 50.000 0.00 0.00 0.00 2.83
2245 2320 2.389962 TACCAGGACGCCATGTAAAC 57.610 50.000 0.00 0.00 0.00 2.01
2246 2321 3.637911 AATACCAGGACGCCATGTAAA 57.362 42.857 0.00 0.00 0.00 2.01
2247 2322 3.637911 AAATACCAGGACGCCATGTAA 57.362 42.857 0.00 0.00 0.00 2.41
2248 2323 3.275143 CAAAATACCAGGACGCCATGTA 58.725 45.455 0.00 0.67 0.00 2.29
2249 2324 2.091541 CAAAATACCAGGACGCCATGT 58.908 47.619 0.00 0.00 0.00 3.21
2250 2325 1.202290 GCAAAATACCAGGACGCCATG 60.202 52.381 0.00 0.00 0.00 3.66
2251 2326 1.102978 GCAAAATACCAGGACGCCAT 58.897 50.000 0.00 0.00 0.00 4.40
2252 2327 0.250945 TGCAAAATACCAGGACGCCA 60.251 50.000 0.00 0.00 0.00 5.69
2253 2328 0.885196 TTGCAAAATACCAGGACGCC 59.115 50.000 0.00 0.00 0.00 5.68
2254 2329 2.163412 TGATTGCAAAATACCAGGACGC 59.837 45.455 1.71 0.00 0.00 5.19
2255 2330 4.082787 AGTTGATTGCAAAATACCAGGACG 60.083 41.667 1.71 0.00 35.42 4.79
2256 2331 5.391312 AGTTGATTGCAAAATACCAGGAC 57.609 39.130 1.71 0.00 35.42 3.85
2257 2332 6.041409 TCAAAGTTGATTGCAAAATACCAGGA 59.959 34.615 1.71 0.00 35.42 3.86
2258 2333 6.222389 TCAAAGTTGATTGCAAAATACCAGG 58.778 36.000 1.71 0.00 35.42 4.45
2259 2334 7.224362 TGTTCAAAGTTGATTGCAAAATACCAG 59.776 33.333 1.71 0.00 37.00 4.00
2260 2335 7.044181 TGTTCAAAGTTGATTGCAAAATACCA 58.956 30.769 1.71 0.00 37.00 3.25
2261 2336 7.475771 TGTTCAAAGTTGATTGCAAAATACC 57.524 32.000 1.71 0.00 37.00 2.73
2262 2337 8.763356 TGATGTTCAAAGTTGATTGCAAAATAC 58.237 29.630 1.71 1.43 37.00 1.89
2263 2338 8.883954 TGATGTTCAAAGTTGATTGCAAAATA 57.116 26.923 1.71 0.00 37.00 1.40
2264 2339 7.789273 TGATGTTCAAAGTTGATTGCAAAAT 57.211 28.000 1.71 0.00 37.00 1.82
2265 2340 7.606858 TTGATGTTCAAAGTTGATTGCAAAA 57.393 28.000 1.71 0.00 37.00 2.44
2266 2341 7.789273 ATTGATGTTCAAAGTTGATTGCAAA 57.211 28.000 1.71 0.00 40.12 3.68
2267 2342 7.789273 AATTGATGTTCAAAGTTGATTGCAA 57.211 28.000 0.00 0.00 40.12 4.08
2268 2343 7.041916 GGAAATTGATGTTCAAAGTTGATTGCA 60.042 33.333 0.00 0.00 40.12 4.08
2269 2344 7.293018 GGAAATTGATGTTCAAAGTTGATTGC 58.707 34.615 0.00 0.00 40.12 3.56
2270 2345 7.095102 GGGGAAATTGATGTTCAAAGTTGATTG 60.095 37.037 0.00 0.00 40.12 2.67
2271 2346 6.936335 GGGGAAATTGATGTTCAAAGTTGATT 59.064 34.615 0.00 0.00 40.12 2.57
2272 2347 6.466812 GGGGAAATTGATGTTCAAAGTTGAT 58.533 36.000 0.00 0.00 40.12 2.57
2273 2348 5.221621 GGGGGAAATTGATGTTCAAAGTTGA 60.222 40.000 0.00 0.00 40.12 3.18
2274 2349 4.996758 GGGGGAAATTGATGTTCAAAGTTG 59.003 41.667 0.00 0.00 40.12 3.16
2275 2350 4.262420 CGGGGGAAATTGATGTTCAAAGTT 60.262 41.667 0.00 0.00 40.12 2.66
2276 2351 3.258123 CGGGGGAAATTGATGTTCAAAGT 59.742 43.478 0.00 0.00 40.12 2.66
2277 2352 3.848726 CGGGGGAAATTGATGTTCAAAG 58.151 45.455 0.00 0.00 40.12 2.77
2278 2353 2.028567 GCGGGGGAAATTGATGTTCAAA 60.029 45.455 0.00 0.00 40.12 2.69
2279 2354 1.548269 GCGGGGGAAATTGATGTTCAA 59.452 47.619 0.00 0.00 41.09 2.69
2280 2355 1.181786 GCGGGGGAAATTGATGTTCA 58.818 50.000 0.00 0.00 0.00 3.18
2281 2356 1.181786 TGCGGGGGAAATTGATGTTC 58.818 50.000 0.00 0.00 0.00 3.18
2282 2357 1.638529 TTGCGGGGGAAATTGATGTT 58.361 45.000 0.00 0.00 0.00 2.71
2283 2358 1.638529 TTTGCGGGGGAAATTGATGT 58.361 45.000 0.00 0.00 0.00 3.06
2284 2359 2.758736 TTTTGCGGGGGAAATTGATG 57.241 45.000 0.00 0.00 0.00 3.07
2313 2388 9.949174 GCCAAACTGATGTTCAAAATTTTATTT 57.051 25.926 2.44 0.00 34.96 1.40
2314 2389 8.567104 GGCCAAACTGATGTTCAAAATTTTATT 58.433 29.630 2.44 0.00 34.96 1.40
2315 2390 7.095271 CGGCCAAACTGATGTTCAAAATTTTAT 60.095 33.333 2.24 0.00 34.96 1.40
2316 2391 6.201806 CGGCCAAACTGATGTTCAAAATTTTA 59.798 34.615 2.24 0.00 34.96 1.52
2317 2392 5.007528 CGGCCAAACTGATGTTCAAAATTTT 59.992 36.000 2.24 0.00 34.96 1.82
2318 2393 4.511082 CGGCCAAACTGATGTTCAAAATTT 59.489 37.500 2.24 0.00 34.96 1.82
2319 2394 4.057432 CGGCCAAACTGATGTTCAAAATT 58.943 39.130 2.24 0.00 34.96 1.82
2320 2395 3.320541 TCGGCCAAACTGATGTTCAAAAT 59.679 39.130 2.24 0.00 34.96 1.82
2321 2396 2.690497 TCGGCCAAACTGATGTTCAAAA 59.310 40.909 2.24 0.00 34.96 2.44
2322 2397 2.034053 GTCGGCCAAACTGATGTTCAAA 59.966 45.455 2.24 0.00 35.65 2.69
2323 2398 1.606668 GTCGGCCAAACTGATGTTCAA 59.393 47.619 2.24 0.00 35.65 2.69
2324 2399 1.234821 GTCGGCCAAACTGATGTTCA 58.765 50.000 2.24 0.00 35.65 3.18
2325 2400 1.234821 TGTCGGCCAAACTGATGTTC 58.765 50.000 2.24 0.00 35.65 3.18
2326 2401 1.686355 TTGTCGGCCAAACTGATGTT 58.314 45.000 2.24 0.00 35.65 2.71
2327 2402 1.909700 ATTGTCGGCCAAACTGATGT 58.090 45.000 2.24 0.00 36.44 3.06
2328 2403 2.746904 TGTATTGTCGGCCAAACTGATG 59.253 45.455 2.24 0.00 36.44 3.07
2329 2404 3.066291 TGTATTGTCGGCCAAACTGAT 57.934 42.857 2.24 2.15 36.44 2.90
2330 2405 2.552599 TGTATTGTCGGCCAAACTGA 57.447 45.000 2.24 0.00 36.44 3.41
2331 2406 2.731968 GCATGTATTGTCGGCCAAACTG 60.732 50.000 2.24 0.00 36.44 3.16
2332 2407 1.472480 GCATGTATTGTCGGCCAAACT 59.528 47.619 2.24 0.00 36.44 2.66
2333 2408 1.201181 TGCATGTATTGTCGGCCAAAC 59.799 47.619 2.24 0.00 36.44 2.93
2334 2409 1.539157 TGCATGTATTGTCGGCCAAA 58.461 45.000 2.24 0.00 36.44 3.28
2335 2410 1.675483 GATGCATGTATTGTCGGCCAA 59.325 47.619 2.46 0.00 37.49 4.52
2336 2411 1.134128 AGATGCATGTATTGTCGGCCA 60.134 47.619 2.46 0.00 0.00 5.36
2337 2412 1.597742 AGATGCATGTATTGTCGGCC 58.402 50.000 2.46 0.00 0.00 6.13
2338 2413 3.559655 TGTAAGATGCATGTATTGTCGGC 59.440 43.478 2.46 0.00 0.00 5.54
2339 2414 5.733226 TTGTAAGATGCATGTATTGTCGG 57.267 39.130 2.46 0.00 0.00 4.79
2340 2415 5.965334 GGTTTGTAAGATGCATGTATTGTCG 59.035 40.000 2.46 0.00 0.00 4.35
2341 2416 6.851609 TGGTTTGTAAGATGCATGTATTGTC 58.148 36.000 2.46 0.00 0.00 3.18
2342 2417 6.832520 TGGTTTGTAAGATGCATGTATTGT 57.167 33.333 2.46 0.00 0.00 2.71
2357 2432 9.562408 TCGGCTGAAAAATATATATGGTTTGTA 57.438 29.630 8.63 0.56 0.00 2.41
2358 2433 8.349983 GTCGGCTGAAAAATATATATGGTTTGT 58.650 33.333 0.00 0.00 0.00 2.83
2359 2434 7.807907 GGTCGGCTGAAAAATATATATGGTTTG 59.192 37.037 0.00 0.17 0.00 2.93
2360 2435 7.504238 TGGTCGGCTGAAAAATATATATGGTTT 59.496 33.333 0.00 0.62 0.00 3.27
2361 2436 7.001674 TGGTCGGCTGAAAAATATATATGGTT 58.998 34.615 0.00 0.00 0.00 3.67
2362 2437 6.539173 TGGTCGGCTGAAAAATATATATGGT 58.461 36.000 0.00 0.00 0.00 3.55
2363 2438 7.447374 TTGGTCGGCTGAAAAATATATATGG 57.553 36.000 0.00 0.00 0.00 2.74
2366 2441 9.562408 TGTATTTGGTCGGCTGAAAAATATATA 57.438 29.630 19.85 11.61 32.18 0.86
2367 2442 8.458573 TGTATTTGGTCGGCTGAAAAATATAT 57.541 30.769 19.85 5.15 32.18 0.86
2368 2443 7.867305 TGTATTTGGTCGGCTGAAAAATATA 57.133 32.000 19.85 16.52 32.18 0.86
2369 2444 6.767524 TGTATTTGGTCGGCTGAAAAATAT 57.232 33.333 19.85 6.03 32.18 1.28
2370 2445 6.767524 ATGTATTTGGTCGGCTGAAAAATA 57.232 33.333 15.73 15.73 29.91 1.40
2371 2446 5.659440 ATGTATTTGGTCGGCTGAAAAAT 57.341 34.783 17.22 17.22 31.31 1.82
2372 2447 5.461032 AATGTATTTGGTCGGCTGAAAAA 57.539 34.783 0.00 1.61 0.00 1.94
2373 2448 5.010112 TGAAATGTATTTGGTCGGCTGAAAA 59.990 36.000 0.00 0.00 0.00 2.29
2374 2449 4.520874 TGAAATGTATTTGGTCGGCTGAAA 59.479 37.500 0.00 0.00 0.00 2.69
2375 2450 4.075682 TGAAATGTATTTGGTCGGCTGAA 58.924 39.130 0.00 0.00 0.00 3.02
2376 2451 3.680490 TGAAATGTATTTGGTCGGCTGA 58.320 40.909 0.00 0.00 0.00 4.26
2377 2452 4.433186 TTGAAATGTATTTGGTCGGCTG 57.567 40.909 0.00 0.00 0.00 4.85
2378 2453 5.659440 AATTGAAATGTATTTGGTCGGCT 57.341 34.783 0.00 0.00 0.00 5.52
2379 2454 9.522804 TTATTAATTGAAATGTATTTGGTCGGC 57.477 29.630 0.00 0.00 0.00 5.54
2404 2479 9.590828 TGTAATTCATATTCCCATCATGTCATT 57.409 29.630 0.00 0.00 0.00 2.57
2405 2480 9.239551 CTGTAATTCATATTCCCATCATGTCAT 57.760 33.333 0.00 0.00 0.00 3.06
2406 2481 8.439172 TCTGTAATTCATATTCCCATCATGTCA 58.561 33.333 0.00 0.00 0.00 3.58
2407 2482 8.853077 TCTGTAATTCATATTCCCATCATGTC 57.147 34.615 0.00 0.00 0.00 3.06
2408 2483 9.818270 ATTCTGTAATTCATATTCCCATCATGT 57.182 29.630 0.00 0.00 0.00 3.21
2411 2486 9.865152 TTCATTCTGTAATTCATATTCCCATCA 57.135 29.630 0.00 0.00 0.00 3.07
2421 2496 8.562892 CGCTTCCTTATTCATTCTGTAATTCAT 58.437 33.333 0.00 0.00 0.00 2.57
2422 2497 7.012327 CCGCTTCCTTATTCATTCTGTAATTCA 59.988 37.037 0.00 0.00 0.00 2.57
2423 2498 7.355778 CCGCTTCCTTATTCATTCTGTAATTC 58.644 38.462 0.00 0.00 0.00 2.17
2424 2499 6.263168 CCCGCTTCCTTATTCATTCTGTAATT 59.737 38.462 0.00 0.00 0.00 1.40
2425 2500 5.765182 CCCGCTTCCTTATTCATTCTGTAAT 59.235 40.000 0.00 0.00 0.00 1.89
2426 2501 5.104693 TCCCGCTTCCTTATTCATTCTGTAA 60.105 40.000 0.00 0.00 0.00 2.41
2427 2502 4.407621 TCCCGCTTCCTTATTCATTCTGTA 59.592 41.667 0.00 0.00 0.00 2.74
2428 2503 3.199946 TCCCGCTTCCTTATTCATTCTGT 59.800 43.478 0.00 0.00 0.00 3.41
2429 2504 3.808728 TCCCGCTTCCTTATTCATTCTG 58.191 45.455 0.00 0.00 0.00 3.02
2430 2505 4.503714 TTCCCGCTTCCTTATTCATTCT 57.496 40.909 0.00 0.00 0.00 2.40
2431 2506 4.881850 TCTTTCCCGCTTCCTTATTCATTC 59.118 41.667 0.00 0.00 0.00 2.67
2432 2507 4.855340 TCTTTCCCGCTTCCTTATTCATT 58.145 39.130 0.00 0.00 0.00 2.57
2433 2508 4.503714 TCTTTCCCGCTTCCTTATTCAT 57.496 40.909 0.00 0.00 0.00 2.57
2434 2509 3.992943 TCTTTCCCGCTTCCTTATTCA 57.007 42.857 0.00 0.00 0.00 2.57
2435 2510 4.096532 CCTTTCTTTCCCGCTTCCTTATTC 59.903 45.833 0.00 0.00 0.00 1.75
2436 2511 4.017126 CCTTTCTTTCCCGCTTCCTTATT 58.983 43.478 0.00 0.00 0.00 1.40
2437 2512 3.621558 CCTTTCTTTCCCGCTTCCTTAT 58.378 45.455 0.00 0.00 0.00 1.73
2438 2513 2.290705 CCCTTTCTTTCCCGCTTCCTTA 60.291 50.000 0.00 0.00 0.00 2.69
2439 2514 1.547901 CCCTTTCTTTCCCGCTTCCTT 60.548 52.381 0.00 0.00 0.00 3.36
2440 2515 0.038310 CCCTTTCTTTCCCGCTTCCT 59.962 55.000 0.00 0.00 0.00 3.36
2441 2516 0.251209 ACCCTTTCTTTCCCGCTTCC 60.251 55.000 0.00 0.00 0.00 3.46
2442 2517 0.881796 CACCCTTTCTTTCCCGCTTC 59.118 55.000 0.00 0.00 0.00 3.86
2443 2518 0.185175 ACACCCTTTCTTTCCCGCTT 59.815 50.000 0.00 0.00 0.00 4.68
2444 2519 0.537371 CACACCCTTTCTTTCCCGCT 60.537 55.000 0.00 0.00 0.00 5.52
2445 2520 0.536460 TCACACCCTTTCTTTCCCGC 60.536 55.000 0.00 0.00 0.00 6.13
2446 2521 1.202770 ACTCACACCCTTTCTTTCCCG 60.203 52.381 0.00 0.00 0.00 5.14
2447 2522 2.623416 CAACTCACACCCTTTCTTTCCC 59.377 50.000 0.00 0.00 0.00 3.97
2448 2523 2.034685 GCAACTCACACCCTTTCTTTCC 59.965 50.000 0.00 0.00 0.00 3.13
2449 2524 2.687935 TGCAACTCACACCCTTTCTTTC 59.312 45.455 0.00 0.00 0.00 2.62
2450 2525 2.733956 TGCAACTCACACCCTTTCTTT 58.266 42.857 0.00 0.00 0.00 2.52
2451 2526 2.435372 TGCAACTCACACCCTTTCTT 57.565 45.000 0.00 0.00 0.00 2.52
2452 2527 2.435372 TTGCAACTCACACCCTTTCT 57.565 45.000 0.00 0.00 0.00 2.52
2453 2528 3.119137 ACTTTTGCAACTCACACCCTTTC 60.119 43.478 0.00 0.00 0.00 2.62
2454 2529 2.831526 ACTTTTGCAACTCACACCCTTT 59.168 40.909 0.00 0.00 0.00 3.11
2455 2530 2.456577 ACTTTTGCAACTCACACCCTT 58.543 42.857 0.00 0.00 0.00 3.95
2456 2531 2.143876 ACTTTTGCAACTCACACCCT 57.856 45.000 0.00 0.00 0.00 4.34
2457 2532 2.165437 TGAACTTTTGCAACTCACACCC 59.835 45.455 0.00 0.00 0.00 4.61
2458 2533 3.502191 TGAACTTTTGCAACTCACACC 57.498 42.857 0.00 0.00 0.00 4.16
2459 2534 4.423732 ACATGAACTTTTGCAACTCACAC 58.576 39.130 0.00 0.00 0.00 3.82
2460 2535 4.717233 ACATGAACTTTTGCAACTCACA 57.283 36.364 0.00 0.00 0.00 3.58
2461 2536 6.494842 TCTAACATGAACTTTTGCAACTCAC 58.505 36.000 0.00 0.00 0.00 3.51
2462 2537 6.691754 TCTAACATGAACTTTTGCAACTCA 57.308 33.333 0.00 0.05 0.00 3.41
2463 2538 5.626955 GCTCTAACATGAACTTTTGCAACTC 59.373 40.000 0.00 0.00 0.00 3.01
2464 2539 5.300286 AGCTCTAACATGAACTTTTGCAACT 59.700 36.000 0.00 0.00 0.00 3.16
2465 2540 5.523369 AGCTCTAACATGAACTTTTGCAAC 58.477 37.500 0.00 0.00 0.00 4.17
2466 2541 5.772825 AGCTCTAACATGAACTTTTGCAA 57.227 34.783 0.00 0.00 0.00 4.08
2467 2542 5.507817 CCAAGCTCTAACATGAACTTTTGCA 60.508 40.000 0.00 0.00 0.00 4.08
2468 2543 4.919754 CCAAGCTCTAACATGAACTTTTGC 59.080 41.667 0.00 0.00 0.00 3.68
2469 2544 5.464168 CCCAAGCTCTAACATGAACTTTTG 58.536 41.667 0.00 0.00 0.00 2.44
2470 2545 4.021981 GCCCAAGCTCTAACATGAACTTTT 60.022 41.667 0.00 0.00 35.50 2.27
2471 2546 3.507622 GCCCAAGCTCTAACATGAACTTT 59.492 43.478 0.00 0.00 35.50 2.66
2472 2547 3.084786 GCCCAAGCTCTAACATGAACTT 58.915 45.455 0.00 0.00 35.50 2.66
2473 2548 2.716217 GCCCAAGCTCTAACATGAACT 58.284 47.619 0.00 0.00 35.50 3.01
2486 2561 3.455469 GCACCATGGAGCCCAAGC 61.455 66.667 22.30 8.38 36.95 4.01
2487 2562 1.751927 GAGCACCATGGAGCCCAAG 60.752 63.158 27.92 5.85 36.95 3.61
2488 2563 1.792757 AAGAGCACCATGGAGCCCAA 61.793 55.000 27.92 0.00 36.95 4.12
2489 2564 1.792757 AAAGAGCACCATGGAGCCCA 61.793 55.000 27.92 0.00 38.19 5.36
2490 2565 0.613012 AAAAGAGCACCATGGAGCCC 60.613 55.000 27.92 18.61 32.18 5.19
2491 2566 1.260544 AAAAAGAGCACCATGGAGCC 58.739 50.000 27.92 19.52 32.18 4.70
2492 2567 3.696051 TCATAAAAAGAGCACCATGGAGC 59.304 43.478 24.95 24.95 0.00 4.70
2493 2568 5.902613 TTCATAAAAAGAGCACCATGGAG 57.097 39.130 21.47 12.70 0.00 3.86
2494 2569 6.662865 TTTTCATAAAAAGAGCACCATGGA 57.337 33.333 21.47 0.00 30.90 3.41
2657 2732 9.855021 GGCATATAAGCTACAGAAAAAGAAAAA 57.145 29.630 0.00 0.00 34.17 1.94
2658 2733 9.019656 TGGCATATAAGCTACAGAAAAAGAAAA 57.980 29.630 0.00 0.00 34.17 2.29
2659 2734 8.574251 TGGCATATAAGCTACAGAAAAAGAAA 57.426 30.769 0.00 0.00 34.17 2.52
2660 2735 8.574251 TTGGCATATAAGCTACAGAAAAAGAA 57.426 30.769 0.00 0.00 34.17 2.52
2661 2736 8.752005 ATTGGCATATAAGCTACAGAAAAAGA 57.248 30.769 0.00 0.00 34.17 2.52
2756 2831 9.940166 GAACCATAGTTTAAAGTTTCGAAAGAA 57.060 29.630 11.66 0.73 42.12 2.52
2757 2832 9.333724 AGAACCATAGTTTAAAGTTTCGAAAGA 57.666 29.630 11.66 0.00 35.94 2.52
2758 2833 9.595357 GAGAACCATAGTTTAAAGTTTCGAAAG 57.405 33.333 11.66 0.00 35.94 2.62
2759 2834 9.111613 TGAGAACCATAGTTTAAAGTTTCGAAA 57.888 29.630 6.47 6.47 35.94 3.46
2760 2835 8.665643 TGAGAACCATAGTTTAAAGTTTCGAA 57.334 30.769 0.00 0.00 35.94 3.71
2761 2836 8.145767 TCTGAGAACCATAGTTTAAAGTTTCGA 58.854 33.333 0.00 0.00 35.94 3.71
2762 2837 8.306680 TCTGAGAACCATAGTTTAAAGTTTCG 57.693 34.615 0.00 0.00 35.94 3.46
2801 2876 1.538950 CTGAGTGAGGCTTTTTGGAGC 59.461 52.381 0.00 0.00 41.96 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.