Multiple sequence alignment - TraesCS7D01G533900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G533900 chr7D 100.000 3846 0 0 1 3846 626831639 626835484 0.000000e+00 7103.0
1 TraesCS7D01G533900 chr7D 81.150 313 39 10 3533 3830 627062992 627063299 2.310000e-57 233.0
2 TraesCS7D01G533900 chr7D 80.259 309 35 14 3533 3823 627075139 627075439 3.890000e-50 209.0
3 TraesCS7D01G533900 chr7D 85.227 88 8 4 3533 3615 626911631 626911718 6.850000e-13 86.1
4 TraesCS7D01G533900 chrUn 92.891 2532 122 25 1 2521 83575192 83577676 0.000000e+00 3626.0
5 TraesCS7D01G533900 chrUn 96.128 904 28 5 2519 3417 83582517 83583418 0.000000e+00 1469.0
6 TraesCS7D01G533900 chrUn 79.508 732 121 19 1570 2290 83569588 83570301 9.600000e-136 494.0
7 TraesCS7D01G533900 chrUn 93.204 103 7 0 3662 3764 83610881 83610983 6.650000e-33 152.0
8 TraesCS7D01G533900 chrUn 100.000 31 0 0 3810 3840 83583418 83583448 1.490000e-04 58.4
9 TraesCS7D01G533900 chr7A 76.274 569 122 11 1569 2132 722227389 722226829 1.350000e-74 291.0
10 TraesCS7D01G533900 chr4A 81.481 189 34 1 18 205 562447938 562448126 1.850000e-33 154.0
11 TraesCS7D01G533900 chr4A 81.250 176 29 4 20 192 594000174 594000348 5.180000e-29 139.0
12 TraesCS7D01G533900 chr7B 81.773 203 18 10 3662 3846 727395113 727395314 6.650000e-33 152.0
13 TraesCS7D01G533900 chr7B 89.381 113 9 2 3662 3772 727183579 727183468 5.180000e-29 139.0
14 TraesCS7D01G533900 chr4D 79.512 205 36 6 5 205 460655381 460655583 1.440000e-29 141.0
15 TraesCS7D01G533900 chr4D 81.250 144 26 1 63 205 460657713 460657856 8.730000e-22 115.0
16 TraesCS7D01G533900 chr4D 81.250 144 26 1 63 205 460662049 460662192 8.730000e-22 115.0
17 TraesCS7D01G533900 chr4D 81.250 144 26 1 63 205 460664192 460664335 8.730000e-22 115.0
18 TraesCS7D01G533900 chr1B 77.928 222 46 3 32 251 388398754 388398534 6.700000e-28 135.0
19 TraesCS7D01G533900 chr2B 76.355 203 43 5 5 204 777423088 777422888 1.890000e-18 104.0
20 TraesCS7D01G533900 chr2B 85.938 64 8 1 2884 2946 397939309 397939372 2.480000e-07 67.6
21 TraesCS7D01G533900 chr5B 76.761 142 27 5 72 212 476903318 476903182 1.480000e-09 75.0
22 TraesCS7D01G533900 chr5A 79.070 86 15 2 2882 2967 11262330 11262248 5.370000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G533900 chr7D 626831639 626835484 3845 False 7103.0 7103 100.000 1 3846 1 chr7D.!!$F1 3845
1 TraesCS7D01G533900 chrUn 83575192 83577676 2484 False 3626.0 3626 92.891 1 2521 1 chrUn.!!$F2 2520
2 TraesCS7D01G533900 chrUn 83582517 83583448 931 False 763.7 1469 98.064 2519 3840 2 chrUn.!!$F4 1321
3 TraesCS7D01G533900 chrUn 83569588 83570301 713 False 494.0 494 79.508 1570 2290 1 chrUn.!!$F1 720
4 TraesCS7D01G533900 chr7A 722226829 722227389 560 True 291.0 291 76.274 1569 2132 1 chr7A.!!$R1 563

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
264 267 0.040067 GGCAGTTTGCTATATGCGGC 60.040 55.000 0.67 0.0 44.28 6.53 F
1081 1087 0.821517 TTCGCCGGTGTATCTGTCAT 59.178 50.000 16.01 0.0 0.00 3.06 F
1647 1653 1.625315 CAGATGTGGTCTTCCAGGTCA 59.375 52.381 0.00 0.0 45.24 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1810 1816 1.066143 CAGGGAAAGGTAGCGTGTCAT 60.066 52.381 0.0 0.0 0.0 3.06 R
2291 2309 0.033366 GCAGCCCGTTCCAAATTGTT 59.967 50.000 0.0 0.0 0.0 2.83 R
3548 3571 0.034574 CAACCCAACCCATCCATCGA 60.035 55.000 0.0 0.0 0.0 3.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 1.301954 GCACCACCGAAATAGGGGT 59.698 57.895 0.00 0.00 35.94 4.95
22 23 0.323087 GCACCACCGAAATAGGGGTT 60.323 55.000 0.00 0.00 34.16 4.11
27 28 1.210967 CACCGAAATAGGGGTTAGGCA 59.789 52.381 0.00 0.00 33.23 4.75
29 30 1.766496 CCGAAATAGGGGTTAGGCAGA 59.234 52.381 0.00 0.00 0.00 4.26
37 38 4.404185 AGGGGTTAGGCAGAAAGAATTT 57.596 40.909 0.00 0.00 43.98 1.82
50 51 8.253113 GGCAGAAAGAATTTTATTCCATCTTCA 58.747 33.333 0.00 0.00 39.27 3.02
53 54 9.759473 AGAAAGAATTTTATTCCATCTTCAGGA 57.241 29.630 0.00 0.00 39.27 3.86
58 59 1.600058 ATTCCATCTTCAGGAGGCCA 58.400 50.000 5.01 0.00 36.33 5.36
62 63 0.549950 CATCTTCAGGAGGCCACCAT 59.450 55.000 22.29 2.35 0.00 3.55
75 76 0.467384 CCACCATCATCTCGCCTTCT 59.533 55.000 0.00 0.00 0.00 2.85
76 77 1.579698 CACCATCATCTCGCCTTCTG 58.420 55.000 0.00 0.00 0.00 3.02
77 78 1.137675 CACCATCATCTCGCCTTCTGA 59.862 52.381 0.00 0.00 0.00 3.27
78 79 2.045524 ACCATCATCTCGCCTTCTGAT 58.954 47.619 0.00 0.00 0.00 2.90
79 80 2.036992 ACCATCATCTCGCCTTCTGATC 59.963 50.000 0.00 0.00 0.00 2.92
89 91 2.354259 GCCTTCTGATCAGGACACAAG 58.646 52.381 22.42 16.55 32.41 3.16
92 94 0.615331 TCTGATCAGGACACAAGCCC 59.385 55.000 22.42 0.00 0.00 5.19
96 98 2.642311 TGATCAGGACACAAGCCCTAAA 59.358 45.455 0.00 0.00 0.00 1.85
98 100 3.586470 TCAGGACACAAGCCCTAAAAA 57.414 42.857 0.00 0.00 0.00 1.94
130 132 2.987232 ACATCTAAAAACGGAGCCCTC 58.013 47.619 0.00 0.00 0.00 4.30
136 138 4.974438 AACGGAGCCCTCCCACCA 62.974 66.667 8.68 0.00 46.96 4.17
138 140 3.411517 CGGAGCCCTCCCACCAAT 61.412 66.667 8.68 0.00 46.96 3.16
144 146 1.230212 CCCTCCCACCAATAAGGGC 59.770 63.158 0.00 0.00 45.07 5.19
164 166 2.511600 GGATCCACCGCAACTCCG 60.512 66.667 6.95 0.00 0.00 4.63
180 183 2.267961 CGTGACCCTAAGGCCACC 59.732 66.667 5.01 0.00 36.11 4.61
227 230 1.524008 CGGCAAGGGGTGGAGAAAAC 61.524 60.000 0.00 0.00 0.00 2.43
238 241 3.072211 GTGGAGAAAACCTAAACTCGGG 58.928 50.000 0.00 0.00 0.00 5.14
248 251 0.543410 TAAACTCGGGACAGGAGGCA 60.543 55.000 0.00 0.00 35.82 4.75
262 265 1.532868 GGAGGCAGTTTGCTATATGCG 59.467 52.381 0.67 0.00 44.28 4.73
264 267 0.040067 GGCAGTTTGCTATATGCGGC 60.040 55.000 0.67 0.00 44.28 6.53
272 275 4.443913 TTGCTATATGCGGCTATCGTTA 57.556 40.909 0.00 0.00 46.63 3.18
286 289 1.227674 CGTTAGATGGCTGGCTCCC 60.228 63.158 2.00 0.00 0.00 4.30
314 317 1.527370 GCCGGGGACTAATGCTTCT 59.473 57.895 2.18 0.00 0.00 2.85
316 319 1.954927 CCGGGGACTAATGCTTCTTC 58.045 55.000 0.00 0.00 0.00 2.87
321 324 2.168728 GGGACTAATGCTTCTTCTCCGT 59.831 50.000 0.00 0.00 0.00 4.69
325 328 5.010213 GGACTAATGCTTCTTCTCCGTAGAT 59.990 44.000 0.00 0.00 0.00 1.98
330 333 3.319405 TGCTTCTTCTCCGTAGATGGATC 59.681 47.826 0.00 0.00 37.41 3.36
333 336 1.542030 CTTCTCCGTAGATGGATCCCG 59.458 57.143 9.90 4.73 37.41 5.14
342 345 1.202855 AGATGGATCCCGGAGCAAATG 60.203 52.381 9.90 0.00 0.00 2.32
344 347 1.208706 TGGATCCCGGAGCAAATGTA 58.791 50.000 9.90 0.00 0.00 2.29
355 358 2.480419 GAGCAAATGTACAAGTCAGCGT 59.520 45.455 0.00 0.00 0.00 5.07
356 359 3.659786 AGCAAATGTACAAGTCAGCGTA 58.340 40.909 0.00 0.00 0.00 4.42
357 360 3.679980 AGCAAATGTACAAGTCAGCGTAG 59.320 43.478 0.00 0.00 0.00 3.51
359 362 4.242475 CAAATGTACAAGTCAGCGTAGGA 58.758 43.478 0.00 0.00 0.00 2.94
360 363 3.784701 ATGTACAAGTCAGCGTAGGAG 57.215 47.619 0.00 0.00 0.00 3.69
361 364 2.786777 TGTACAAGTCAGCGTAGGAGA 58.213 47.619 0.00 0.00 0.00 3.71
362 365 3.353557 TGTACAAGTCAGCGTAGGAGAT 58.646 45.455 0.00 0.00 0.00 2.75
363 366 2.949451 ACAAGTCAGCGTAGGAGATG 57.051 50.000 0.00 0.00 0.00 2.90
364 367 1.134965 ACAAGTCAGCGTAGGAGATGC 60.135 52.381 0.00 0.00 40.75 3.91
371 374 2.058913 GCGTAGGAGATGCTCTTAGC 57.941 55.000 0.00 0.00 42.82 3.09
373 376 2.351350 GCGTAGGAGATGCTCTTAGCTC 60.351 54.545 0.00 0.00 42.97 4.09
374 377 3.146066 CGTAGGAGATGCTCTTAGCTCT 58.854 50.000 0.00 1.20 42.97 4.09
375 378 3.188460 CGTAGGAGATGCTCTTAGCTCTC 59.812 52.174 14.64 14.64 42.97 3.20
377 380 3.225104 AGGAGATGCTCTTAGCTCTCAG 58.775 50.000 20.11 0.00 42.22 3.35
378 381 2.297033 GGAGATGCTCTTAGCTCTCAGG 59.703 54.545 20.11 0.00 42.22 3.86
379 382 3.221771 GAGATGCTCTTAGCTCTCAGGA 58.778 50.000 16.58 0.00 42.97 3.86
380 383 3.828451 GAGATGCTCTTAGCTCTCAGGAT 59.172 47.826 16.58 0.00 42.97 3.24
381 384 4.225573 AGATGCTCTTAGCTCTCAGGATT 58.774 43.478 0.00 0.00 42.97 3.01
382 385 4.655186 AGATGCTCTTAGCTCTCAGGATTT 59.345 41.667 0.00 0.00 42.97 2.17
383 386 4.833478 TGCTCTTAGCTCTCAGGATTTT 57.167 40.909 0.00 0.00 42.97 1.82
384 387 5.939764 TGCTCTTAGCTCTCAGGATTTTA 57.060 39.130 0.00 0.00 42.97 1.52
385 388 5.911752 TGCTCTTAGCTCTCAGGATTTTAG 58.088 41.667 0.00 0.00 42.97 1.85
386 389 4.749598 GCTCTTAGCTCTCAGGATTTTAGC 59.250 45.833 0.00 0.00 38.45 3.09
387 390 4.938080 TCTTAGCTCTCAGGATTTTAGCG 58.062 43.478 0.00 0.00 38.23 4.26
388 391 2.611225 AGCTCTCAGGATTTTAGCGG 57.389 50.000 0.00 0.00 38.23 5.52
389 392 2.111384 AGCTCTCAGGATTTTAGCGGA 58.889 47.619 0.00 0.00 38.23 5.54
390 393 2.102252 AGCTCTCAGGATTTTAGCGGAG 59.898 50.000 0.00 0.00 38.23 4.63
391 394 2.159028 GCTCTCAGGATTTTAGCGGAGT 60.159 50.000 0.00 0.00 0.00 3.85
392 395 3.452474 CTCTCAGGATTTTAGCGGAGTG 58.548 50.000 0.00 0.00 0.00 3.51
393 396 2.832129 TCTCAGGATTTTAGCGGAGTGT 59.168 45.455 0.00 0.00 0.00 3.55
394 397 3.119101 TCTCAGGATTTTAGCGGAGTGTC 60.119 47.826 0.00 0.00 0.00 3.67
395 398 2.093658 TCAGGATTTTAGCGGAGTGTCC 60.094 50.000 0.00 0.00 0.00 4.02
396 399 1.906574 AGGATTTTAGCGGAGTGTCCA 59.093 47.619 0.00 0.00 35.91 4.02
397 400 2.505819 AGGATTTTAGCGGAGTGTCCAT 59.494 45.455 0.00 0.00 35.91 3.41
398 401 2.872858 GGATTTTAGCGGAGTGTCCATC 59.127 50.000 0.00 0.00 35.91 3.51
399 402 3.531538 GATTTTAGCGGAGTGTCCATCA 58.468 45.455 0.00 0.00 35.91 3.07
400 403 3.627395 TTTTAGCGGAGTGTCCATCAT 57.373 42.857 0.00 0.00 35.91 2.45
401 404 2.890808 TTAGCGGAGTGTCCATCATC 57.109 50.000 0.00 0.00 35.91 2.92
456 459 1.130054 AGTCCTCACTGGTGTGCCAT 61.130 55.000 0.53 0.00 45.05 4.40
489 492 2.080336 CTCCCCAAAGGCAGACCCAA 62.080 60.000 0.00 0.00 36.11 4.12
493 496 1.703411 CCAAAGGCAGACCCAAAAGA 58.297 50.000 0.00 0.00 36.11 2.52
495 498 2.310538 CAAAGGCAGACCCAAAAGAGT 58.689 47.619 0.00 0.00 36.11 3.24
538 541 2.093869 CCATGAGAAATTGGCCCAACAG 60.094 50.000 0.00 0.00 0.00 3.16
539 542 2.673775 TGAGAAATTGGCCCAACAGA 57.326 45.000 0.00 0.00 0.00 3.41
568 572 9.965902 ATATATCAGAAAAAGTGTCCAGAAACT 57.034 29.630 0.00 0.00 0.00 2.66
658 664 3.921677 ACGACTCGTGACCAATACAATT 58.078 40.909 2.53 0.00 39.18 2.32
688 694 1.396653 TAGCACTAGGACCTTACGGC 58.603 55.000 0.00 0.00 0.00 5.68
715 721 2.874010 CTACAGCGGACCAGCAGACG 62.874 65.000 10.28 0.00 40.15 4.18
869 875 3.269178 CTTGCACTTCCTCTCTCCAATC 58.731 50.000 0.00 0.00 0.00 2.67
886 892 5.537188 TCCAATCCTCAAAATTTTGAACCG 58.463 37.500 28.49 19.13 45.61 4.44
891 897 6.254281 TCCTCAAAATTTTGAACCGATCTC 57.746 37.500 28.49 0.00 45.61 2.75
915 921 8.121305 TCAGCACTGTAAAATATGAAATTGGT 57.879 30.769 0.00 0.00 0.00 3.67
970 976 8.449397 TGCAATGTTATATTTTGTTGGATTTGC 58.551 29.630 0.00 0.00 35.15 3.68
982 988 4.523943 TGTTGGATTTGCTAGTGAATTGCT 59.476 37.500 0.00 0.00 0.00 3.91
994 1000 3.636300 AGTGAATTGCTATCTCTCTCGCT 59.364 43.478 0.00 0.00 0.00 4.93
1011 1017 1.401018 CGCTGGATCGTATATGTGCGA 60.401 52.381 4.97 4.97 46.20 5.10
1047 1053 3.446873 TCACTTGTTGTTGCAGGTTCATT 59.553 39.130 0.00 0.00 0.00 2.57
1081 1087 0.821517 TTCGCCGGTGTATCTGTCAT 59.178 50.000 16.01 0.00 0.00 3.06
1404 1410 2.800053 GCAACCATGCGCATGCTA 59.200 55.556 38.76 5.73 43.83 3.49
1647 1653 1.625315 CAGATGTGGTCTTCCAGGTCA 59.375 52.381 0.00 0.00 45.24 4.02
1810 1816 3.642705 CGATGCTCGGTTTCATCTATGA 58.357 45.455 0.00 0.00 37.52 2.15
1880 1892 4.849329 CACCTACTCGTCGCGGCC 62.849 72.222 4.51 0.00 0.00 6.13
2189 2201 8.806429 TTGCTCTCTTCCATATTTTGTAATCA 57.194 30.769 0.00 0.00 0.00 2.57
2290 2308 5.271598 TGAAATATGCACTTCCCCTTTCAT 58.728 37.500 0.00 0.00 0.00 2.57
2291 2309 6.430864 TGAAATATGCACTTCCCCTTTCATA 58.569 36.000 0.00 0.00 0.00 2.15
2300 2318 6.165577 CACTTCCCCTTTCATAACAATTTGG 58.834 40.000 0.78 0.00 0.00 3.28
2305 2323 5.167845 CCCTTTCATAACAATTTGGAACGG 58.832 41.667 0.78 2.33 0.00 4.44
2320 2338 1.335496 GAACGGGCTGCTGTAAAACAA 59.665 47.619 0.00 0.00 0.00 2.83
2430 2448 4.482386 CATGCAGCCACATTGATATAAGC 58.518 43.478 0.00 0.00 0.00 3.09
2432 2450 3.566742 TGCAGCCACATTGATATAAGCTG 59.433 43.478 4.79 4.79 46.87 4.24
2472 2490 5.932303 TGAGACTTAGGCACTTAACAATCAC 59.068 40.000 0.00 0.00 41.75 3.06
2474 2492 4.332828 ACTTAGGCACTTAACAATCACCC 58.667 43.478 0.00 0.00 41.75 4.61
2542 2560 2.671070 GCGCACCTTTTGTATTGGGAAG 60.671 50.000 0.30 0.00 0.00 3.46
2556 2574 3.664551 TGGGAAGAGAGGAATCGAGTA 57.335 47.619 0.00 0.00 0.00 2.59
2606 2624 3.802139 TCACAGACGATCACAAACAACTC 59.198 43.478 0.00 0.00 0.00 3.01
2614 2632 2.364632 TCACAAACAACTCCACACCAG 58.635 47.619 0.00 0.00 0.00 4.00
2623 2641 2.616524 ACTCCACACCAGCCTAAAGTA 58.383 47.619 0.00 0.00 0.00 2.24
2746 2764 8.331730 AGTATTTAACCGAAAACTAGCACAAT 57.668 30.769 0.00 0.00 0.00 2.71
3091 3113 6.205464 TGAATTAGGAACTCAGCAGTTTTCAG 59.795 38.462 0.00 0.00 43.37 3.02
3169 3192 9.253832 TGTATATTTGAATTGAATGTGGAGGTT 57.746 29.630 0.00 0.00 0.00 3.50
3260 3283 3.132646 GGGCCATTTCAATAAGTCATGCA 59.867 43.478 4.39 0.00 0.00 3.96
3284 3307 7.430502 GCAATGTTTATGATTTGTAGCAGTCTC 59.569 37.037 0.00 0.00 0.00 3.36
3382 3405 4.099727 GGGAGAAATGAGGTGGTACTACTC 59.900 50.000 9.41 7.11 33.67 2.59
3417 3440 4.689612 ACACAGTGTGATGAAACTACCT 57.310 40.909 29.58 0.00 36.96 3.08
3418 3441 5.801531 ACACAGTGTGATGAAACTACCTA 57.198 39.130 29.58 0.00 36.96 3.08
3419 3442 6.169557 ACACAGTGTGATGAAACTACCTAA 57.830 37.500 29.58 0.00 36.96 2.69
3420 3443 5.989777 ACACAGTGTGATGAAACTACCTAAC 59.010 40.000 29.58 0.00 36.96 2.34
3421 3444 5.989168 CACAGTGTGATGAAACTACCTAACA 59.011 40.000 18.83 0.00 35.23 2.41
3422 3445 6.650807 CACAGTGTGATGAAACTACCTAACAT 59.349 38.462 18.83 0.00 35.23 2.71
3423 3446 7.173218 CACAGTGTGATGAAACTACCTAACATT 59.827 37.037 18.83 0.00 35.23 2.71
3424 3447 8.372459 ACAGTGTGATGAAACTACCTAACATTA 58.628 33.333 0.00 0.00 0.00 1.90
3425 3448 8.873830 CAGTGTGATGAAACTACCTAACATTAG 58.126 37.037 0.00 0.00 0.00 1.73
3426 3449 8.594550 AGTGTGATGAAACTACCTAACATTAGT 58.405 33.333 0.00 0.00 0.00 2.24
3427 3450 9.216117 GTGTGATGAAACTACCTAACATTAGTT 57.784 33.333 0.00 0.00 39.69 2.24
3428 3451 9.787435 TGTGATGAAACTACCTAACATTAGTTT 57.213 29.630 6.47 6.47 46.46 2.66
3437 3460 9.819267 ACTACCTAACATTAGTTTCATAAGAGC 57.181 33.333 0.00 0.00 39.15 4.09
3457 3480 6.887626 GAGCTAACTCTATGCTAACTACCT 57.112 41.667 0.00 0.00 40.03 3.08
3458 3481 7.279750 GAGCTAACTCTATGCTAACTACCTT 57.720 40.000 0.00 0.00 40.03 3.50
3459 3482 8.393671 GAGCTAACTCTATGCTAACTACCTTA 57.606 38.462 0.00 0.00 40.03 2.69
3460 3483 8.943594 AGCTAACTCTATGCTAACTACCTTAT 57.056 34.615 0.00 0.00 35.05 1.73
3461 3484 9.369672 AGCTAACTCTATGCTAACTACCTTATT 57.630 33.333 0.00 0.00 35.05 1.40
3468 3491 9.824216 TCTATGCTAACTACCTTATTATGACCT 57.176 33.333 0.00 0.00 0.00 3.85
3471 3494 9.780186 ATGCTAACTACCTTATTATGACCTTTC 57.220 33.333 0.00 0.00 0.00 2.62
3472 3495 8.989131 TGCTAACTACCTTATTATGACCTTTCT 58.011 33.333 0.00 0.00 0.00 2.52
3473 3496 9.478768 GCTAACTACCTTATTATGACCTTTCTC 57.521 37.037 0.00 0.00 0.00 2.87
3474 3497 9.984190 CTAACTACCTTATTATGACCTTTCTCC 57.016 37.037 0.00 0.00 0.00 3.71
3475 3498 7.989947 ACTACCTTATTATGACCTTTCTCCA 57.010 36.000 0.00 0.00 0.00 3.86
3476 3499 8.568617 ACTACCTTATTATGACCTTTCTCCAT 57.431 34.615 0.00 0.00 0.00 3.41
3477 3500 9.670442 ACTACCTTATTATGACCTTTCTCCATA 57.330 33.333 0.00 0.00 0.00 2.74
3483 3506 9.639563 TTATTATGACCTTTCTCCATATTTGCA 57.360 29.630 0.00 0.00 0.00 4.08
3484 3507 7.572523 TTATGACCTTTCTCCATATTTGCAG 57.427 36.000 0.00 0.00 0.00 4.41
3485 3508 5.178096 TGACCTTTCTCCATATTTGCAGA 57.822 39.130 0.00 0.00 0.00 4.26
3486 3509 5.569355 TGACCTTTCTCCATATTTGCAGAA 58.431 37.500 0.00 0.00 0.00 3.02
3487 3510 6.009589 TGACCTTTCTCCATATTTGCAGAAA 58.990 36.000 2.79 2.79 34.47 2.52
3488 3511 6.493115 TGACCTTTCTCCATATTTGCAGAAAA 59.507 34.615 4.19 0.00 35.08 2.29
3489 3512 7.178983 TGACCTTTCTCCATATTTGCAGAAAAT 59.821 33.333 4.19 0.00 41.47 1.82
3490 3513 7.910584 ACCTTTCTCCATATTTGCAGAAAATT 58.089 30.769 4.19 0.00 39.29 1.82
3491 3514 8.377799 ACCTTTCTCCATATTTGCAGAAAATTT 58.622 29.630 4.19 0.00 39.29 1.82
3492 3515 9.874205 CCTTTCTCCATATTTGCAGAAAATTTA 57.126 29.630 4.19 0.00 39.29 1.40
3506 3529 8.691797 TGCAGAAAATTTAAATATACCCAGTCC 58.308 33.333 0.01 0.00 0.00 3.85
3507 3530 8.691797 GCAGAAAATTTAAATATACCCAGTCCA 58.308 33.333 0.01 0.00 0.00 4.02
3521 3544 8.837099 ATACCCAGTCCAAATTTGAATTATCA 57.163 30.769 19.86 0.00 0.00 2.15
3522 3545 7.552050 ACCCAGTCCAAATTTGAATTATCAA 57.448 32.000 19.86 0.00 43.70 2.57
3563 3586 2.928801 TGTATCGATGGATGGGTTGG 57.071 50.000 8.54 0.00 34.00 3.77
3564 3587 1.419762 TGTATCGATGGATGGGTTGGG 59.580 52.381 8.54 0.00 34.00 4.12
3565 3588 1.420138 GTATCGATGGATGGGTTGGGT 59.580 52.381 8.54 0.00 34.00 4.51
3566 3589 0.926293 ATCGATGGATGGGTTGGGTT 59.074 50.000 0.00 0.00 0.00 4.11
3567 3590 0.034574 TCGATGGATGGGTTGGGTTG 60.035 55.000 0.00 0.00 0.00 3.77
3568 3591 0.323360 CGATGGATGGGTTGGGTTGT 60.323 55.000 0.00 0.00 0.00 3.32
3569 3592 1.474330 GATGGATGGGTTGGGTTGTC 58.526 55.000 0.00 0.00 0.00 3.18
3570 3593 0.783206 ATGGATGGGTTGGGTTGTCA 59.217 50.000 0.00 0.00 0.00 3.58
3571 3594 0.178975 TGGATGGGTTGGGTTGTCAC 60.179 55.000 0.00 0.00 0.00 3.67
3572 3595 0.178975 GGATGGGTTGGGTTGTCACA 60.179 55.000 0.00 0.00 0.00 3.58
3573 3596 1.247567 GATGGGTTGGGTTGTCACAG 58.752 55.000 0.00 0.00 0.00 3.66
3574 3597 0.827507 ATGGGTTGGGTTGTCACAGC 60.828 55.000 0.00 0.00 0.00 4.40
3575 3598 2.200337 GGGTTGGGTTGTCACAGCC 61.200 63.158 1.03 1.03 45.71 4.85
3576 3599 1.454847 GGTTGGGTTGTCACAGCCA 60.455 57.895 13.39 3.57 45.73 4.75
3577 3600 0.827507 GGTTGGGTTGTCACAGCCAT 60.828 55.000 13.39 0.00 45.73 4.40
3578 3601 0.314935 GTTGGGTTGTCACAGCCATG 59.685 55.000 13.39 0.00 43.89 3.66
3579 3602 0.184692 TTGGGTTGTCACAGCCATGA 59.815 50.000 13.39 0.00 43.89 3.07
3580 3603 0.250858 TGGGTTGTCACAGCCATGAG 60.251 55.000 13.39 0.00 39.48 2.90
3581 3604 0.036732 GGGTTGTCACAGCCATGAGA 59.963 55.000 13.39 0.00 36.44 3.27
3582 3605 1.340405 GGGTTGTCACAGCCATGAGAT 60.340 52.381 13.39 0.00 36.44 2.75
3583 3606 2.440409 GGTTGTCACAGCCATGAGATT 58.560 47.619 5.66 0.00 34.81 2.40
3584 3607 2.821969 GGTTGTCACAGCCATGAGATTT 59.178 45.455 5.66 0.00 34.81 2.17
3585 3608 3.366679 GGTTGTCACAGCCATGAGATTTG 60.367 47.826 5.66 0.00 34.81 2.32
3586 3609 1.814394 TGTCACAGCCATGAGATTTGC 59.186 47.619 0.00 0.00 0.00 3.68
3587 3610 1.814394 GTCACAGCCATGAGATTTGCA 59.186 47.619 0.00 0.00 0.00 4.08
3588 3611 1.814394 TCACAGCCATGAGATTTGCAC 59.186 47.619 0.00 0.00 0.00 4.57
3589 3612 1.542472 CACAGCCATGAGATTTGCACA 59.458 47.619 0.00 0.00 0.00 4.57
3590 3613 1.542915 ACAGCCATGAGATTTGCACAC 59.457 47.619 0.00 0.00 0.00 3.82
3591 3614 1.542472 CAGCCATGAGATTTGCACACA 59.458 47.619 0.00 0.00 0.00 3.72
3592 3615 2.165641 CAGCCATGAGATTTGCACACAT 59.834 45.455 0.00 0.00 0.00 3.21
3593 3616 2.829720 AGCCATGAGATTTGCACACATT 59.170 40.909 0.00 0.00 0.00 2.71
3594 3617 4.018490 AGCCATGAGATTTGCACACATTA 58.982 39.130 0.00 0.00 0.00 1.90
3595 3618 4.647853 AGCCATGAGATTTGCACACATTAT 59.352 37.500 0.00 0.00 0.00 1.28
3596 3619 5.128171 AGCCATGAGATTTGCACACATTATT 59.872 36.000 0.00 0.00 0.00 1.40
3597 3620 5.461078 GCCATGAGATTTGCACACATTATTC 59.539 40.000 0.00 0.00 0.00 1.75
3598 3621 6.682113 GCCATGAGATTTGCACACATTATTCT 60.682 38.462 0.00 0.00 0.00 2.40
3599 3622 6.695713 CCATGAGATTTGCACACATTATTCTG 59.304 38.462 0.00 0.00 0.00 3.02
3600 3623 5.643664 TGAGATTTGCACACATTATTCTGC 58.356 37.500 0.00 0.00 0.00 4.26
3601 3624 4.665212 AGATTTGCACACATTATTCTGCG 58.335 39.130 0.00 0.00 31.96 5.18
3602 3625 3.913548 TTTGCACACATTATTCTGCGT 57.086 38.095 0.00 0.00 31.96 5.24
3603 3626 5.353956 AGATTTGCACACATTATTCTGCGTA 59.646 36.000 0.00 0.00 31.96 4.42
3604 3627 5.559427 TTTGCACACATTATTCTGCGTAT 57.441 34.783 0.00 0.00 31.96 3.06
3605 3628 4.534794 TGCACACATTATTCTGCGTATG 57.465 40.909 0.00 0.00 31.96 2.39
3606 3629 3.312146 TGCACACATTATTCTGCGTATGG 59.688 43.478 0.00 0.00 31.96 2.74
3607 3630 3.849645 GCACACATTATTCTGCGTATGGC 60.850 47.826 0.00 0.00 43.96 4.40
3608 3631 3.561310 CACACATTATTCTGCGTATGGCT 59.439 43.478 0.00 0.00 44.05 4.75
3609 3632 4.749598 CACACATTATTCTGCGTATGGCTA 59.250 41.667 0.00 0.00 44.05 3.93
3610 3633 4.991056 ACACATTATTCTGCGTATGGCTAG 59.009 41.667 0.00 0.00 44.05 3.42
3611 3634 3.997021 ACATTATTCTGCGTATGGCTAGC 59.003 43.478 6.04 6.04 44.05 3.42
3612 3635 4.248859 CATTATTCTGCGTATGGCTAGCT 58.751 43.478 15.72 0.00 44.05 3.32
3613 3636 2.918712 ATTCTGCGTATGGCTAGCTT 57.081 45.000 15.72 5.30 44.05 3.74
3614 3637 1.939974 TTCTGCGTATGGCTAGCTTG 58.060 50.000 15.72 0.00 44.05 4.01
3615 3638 0.104855 TCTGCGTATGGCTAGCTTGG 59.895 55.000 15.72 1.23 44.05 3.61
3616 3639 0.882042 CTGCGTATGGCTAGCTTGGG 60.882 60.000 15.72 1.96 44.05 4.12
3617 3640 1.598130 GCGTATGGCTAGCTTGGGG 60.598 63.158 15.72 3.06 39.11 4.96
3618 3641 2.040009 GCGTATGGCTAGCTTGGGGA 62.040 60.000 15.72 0.00 39.11 4.81
3619 3642 0.468226 CGTATGGCTAGCTTGGGGAA 59.532 55.000 15.72 0.00 0.00 3.97
3620 3643 1.810412 CGTATGGCTAGCTTGGGGAAC 60.810 57.143 15.72 3.15 0.00 3.62
3621 3644 1.490910 GTATGGCTAGCTTGGGGAACT 59.509 52.381 15.72 0.00 0.00 3.01
3622 3645 0.257039 ATGGCTAGCTTGGGGAACTG 59.743 55.000 15.72 0.00 0.00 3.16
3623 3646 1.133809 TGGCTAGCTTGGGGAACTGT 61.134 55.000 15.72 0.00 0.00 3.55
3624 3647 0.393132 GGCTAGCTTGGGGAACTGTC 60.393 60.000 15.72 0.00 0.00 3.51
3625 3648 0.324943 GCTAGCTTGGGGAACTGTCA 59.675 55.000 7.70 0.00 0.00 3.58
3626 3649 1.065126 GCTAGCTTGGGGAACTGTCAT 60.065 52.381 7.70 0.00 0.00 3.06
3627 3650 2.636830 CTAGCTTGGGGAACTGTCATG 58.363 52.381 0.00 0.00 0.00 3.07
3628 3651 0.773644 AGCTTGGGGAACTGTCATGT 59.226 50.000 0.00 0.00 0.00 3.21
3629 3652 1.168714 GCTTGGGGAACTGTCATGTC 58.831 55.000 0.00 0.00 0.00 3.06
3630 3653 1.271597 GCTTGGGGAACTGTCATGTCT 60.272 52.381 0.00 0.00 0.00 3.41
3631 3654 2.815589 GCTTGGGGAACTGTCATGTCTT 60.816 50.000 0.00 0.00 0.00 3.01
3632 3655 2.566833 TGGGGAACTGTCATGTCTTG 57.433 50.000 0.00 0.00 0.00 3.02
3633 3656 1.774254 TGGGGAACTGTCATGTCTTGT 59.226 47.619 0.00 0.00 0.00 3.16
3634 3657 2.224523 TGGGGAACTGTCATGTCTTGTC 60.225 50.000 0.00 0.00 0.00 3.18
3635 3658 2.069273 GGGAACTGTCATGTCTTGTCG 58.931 52.381 0.00 0.00 0.00 4.35
3636 3659 1.461127 GGAACTGTCATGTCTTGTCGC 59.539 52.381 0.00 0.00 0.00 5.19
3637 3660 1.461127 GAACTGTCATGTCTTGTCGCC 59.539 52.381 0.00 0.00 0.00 5.54
3638 3661 0.667487 ACTGTCATGTCTTGTCGCCG 60.667 55.000 0.00 0.00 0.00 6.46
3639 3662 0.667487 CTGTCATGTCTTGTCGCCGT 60.667 55.000 0.00 0.00 0.00 5.68
3640 3663 0.666274 TGTCATGTCTTGTCGCCGTC 60.666 55.000 0.00 0.00 0.00 4.79
3641 3664 1.443702 TCATGTCTTGTCGCCGTCG 60.444 57.895 0.00 0.00 0.00 5.12
3642 3665 1.443702 CATGTCTTGTCGCCGTCGA 60.444 57.895 0.00 0.00 43.28 4.20
3650 3673 2.879168 TCGCCGTCGACATTGCTA 59.121 55.556 17.16 4.17 40.21 3.49
3651 3674 1.213275 TCGCCGTCGACATTGCTAA 59.787 52.632 17.16 3.37 40.21 3.09
3652 3675 0.800683 TCGCCGTCGACATTGCTAAG 60.801 55.000 17.16 3.00 40.21 2.18
3653 3676 1.752501 CGCCGTCGACATTGCTAAGG 61.753 60.000 17.16 6.93 38.10 2.69
3654 3677 2.006772 CCGTCGACATTGCTAAGGC 58.993 57.895 17.16 0.00 39.26 4.35
3655 3678 1.429148 CCGTCGACATTGCTAAGGCC 61.429 60.000 17.16 0.00 37.74 5.19
3656 3679 1.752501 CGTCGACATTGCTAAGGCCG 61.753 60.000 17.16 0.00 37.74 6.13
3657 3680 0.459585 GTCGACATTGCTAAGGCCGA 60.460 55.000 11.55 0.00 37.74 5.54
3658 3681 0.248012 TCGACATTGCTAAGGCCGAA 59.752 50.000 0.00 0.00 37.74 4.30
3659 3682 1.083489 CGACATTGCTAAGGCCGAAA 58.917 50.000 0.00 0.00 37.74 3.46
3660 3683 1.202031 CGACATTGCTAAGGCCGAAAC 60.202 52.381 0.00 0.00 37.74 2.78
3661 3684 1.132453 GACATTGCTAAGGCCGAAACC 59.868 52.381 0.00 0.00 37.74 3.27
3662 3685 1.271926 ACATTGCTAAGGCCGAAACCT 60.272 47.619 0.00 0.00 43.91 3.50
3668 3691 4.157607 AGGCCGAAACCTTGTGTG 57.842 55.556 0.00 0.00 36.28 3.82
3669 3692 1.529796 AGGCCGAAACCTTGTGTGA 59.470 52.632 0.00 0.00 36.28 3.58
3670 3693 0.110486 AGGCCGAAACCTTGTGTGAT 59.890 50.000 0.00 0.00 36.28 3.06
3671 3694 0.240945 GGCCGAAACCTTGTGTGATG 59.759 55.000 0.00 0.00 0.00 3.07
3672 3695 0.951558 GCCGAAACCTTGTGTGATGT 59.048 50.000 0.00 0.00 0.00 3.06
3673 3696 2.147958 GCCGAAACCTTGTGTGATGTA 58.852 47.619 0.00 0.00 0.00 2.29
3674 3697 2.159627 GCCGAAACCTTGTGTGATGTAG 59.840 50.000 0.00 0.00 0.00 2.74
3675 3698 2.159627 CCGAAACCTTGTGTGATGTAGC 59.840 50.000 0.00 0.00 0.00 3.58
3676 3699 2.159627 CGAAACCTTGTGTGATGTAGCC 59.840 50.000 0.00 0.00 0.00 3.93
3677 3700 2.949177 AACCTTGTGTGATGTAGCCA 57.051 45.000 0.00 0.00 0.00 4.75
3678 3701 3.439857 AACCTTGTGTGATGTAGCCAT 57.560 42.857 0.00 0.00 0.00 4.40
3679 3702 2.715046 ACCTTGTGTGATGTAGCCATG 58.285 47.619 0.00 0.00 0.00 3.66
3680 3703 2.305635 ACCTTGTGTGATGTAGCCATGA 59.694 45.455 0.00 0.00 0.00 3.07
3681 3704 3.054139 ACCTTGTGTGATGTAGCCATGAT 60.054 43.478 0.00 0.00 0.00 2.45
3682 3705 3.562973 CCTTGTGTGATGTAGCCATGATC 59.437 47.826 0.00 0.00 0.00 2.92
3683 3706 4.449131 CTTGTGTGATGTAGCCATGATCT 58.551 43.478 0.00 0.00 0.00 2.75
3684 3707 3.800531 TGTGTGATGTAGCCATGATCTG 58.199 45.455 0.00 0.00 0.00 2.90
3685 3708 3.451902 TGTGTGATGTAGCCATGATCTGA 59.548 43.478 0.00 0.00 0.00 3.27
3686 3709 4.102054 TGTGTGATGTAGCCATGATCTGAT 59.898 41.667 0.00 0.00 0.00 2.90
3687 3710 4.689812 GTGTGATGTAGCCATGATCTGATC 59.310 45.833 10.72 10.72 0.00 2.92
3688 3711 4.591924 TGTGATGTAGCCATGATCTGATCT 59.408 41.667 17.82 0.84 0.00 2.75
3689 3712 5.776716 TGTGATGTAGCCATGATCTGATCTA 59.223 40.000 17.82 5.85 0.00 1.98
3690 3713 6.098679 GTGATGTAGCCATGATCTGATCTAC 58.901 44.000 17.82 11.75 34.29 2.59
3691 3714 5.186603 TGATGTAGCCATGATCTGATCTACC 59.813 44.000 17.82 5.01 33.50 3.18
3692 3715 3.507622 TGTAGCCATGATCTGATCTACCG 59.492 47.826 17.82 5.07 33.50 4.02
3693 3716 1.898472 AGCCATGATCTGATCTACCGG 59.102 52.381 17.82 0.00 0.00 5.28
3694 3717 1.895798 GCCATGATCTGATCTACCGGA 59.104 52.381 9.46 0.00 0.00 5.14
3695 3718 2.094286 GCCATGATCTGATCTACCGGAG 60.094 54.545 9.46 0.60 0.00 4.63
3696 3719 3.425659 CCATGATCTGATCTACCGGAGA 58.574 50.000 9.46 7.33 39.01 3.71
3697 3720 3.192422 CCATGATCTGATCTACCGGAGAC 59.808 52.174 9.46 2.91 36.87 3.36
3698 3721 3.577805 TGATCTGATCTACCGGAGACA 57.422 47.619 9.46 7.14 36.87 3.41
3699 3722 3.481453 TGATCTGATCTACCGGAGACAG 58.519 50.000 9.46 15.31 36.87 3.51
3700 3723 2.350057 TCTGATCTACCGGAGACAGG 57.650 55.000 9.46 1.05 36.87 4.00
3701 3724 0.671251 CTGATCTACCGGAGACAGGC 59.329 60.000 9.46 0.00 36.87 4.85
3702 3725 0.259065 TGATCTACCGGAGACAGGCT 59.741 55.000 9.46 0.00 36.87 4.58
3703 3726 0.671251 GATCTACCGGAGACAGGCTG 59.329 60.000 14.16 14.16 36.87 4.85
3704 3727 0.033011 ATCTACCGGAGACAGGCTGT 60.033 55.000 22.26 22.26 36.87 4.40
3705 3728 0.251653 TCTACCGGAGACAGGCTGTT 60.252 55.000 22.98 11.65 0.00 3.16
3706 3729 0.173708 CTACCGGAGACAGGCTGTTC 59.826 60.000 22.98 18.99 0.00 3.18
3707 3730 1.255667 TACCGGAGACAGGCTGTTCC 61.256 60.000 22.98 24.90 0.00 3.62
3708 3731 2.583441 CCGGAGACAGGCTGTTCCA 61.583 63.158 30.50 0.00 37.29 3.53
3709 3732 1.079543 CGGAGACAGGCTGTTCCAG 60.080 63.158 30.50 23.53 37.29 3.86
3710 3733 1.821061 CGGAGACAGGCTGTTCCAGT 61.821 60.000 30.50 14.71 37.27 4.00
3711 3734 0.321122 GGAGACAGGCTGTTCCAGTG 60.321 60.000 28.57 4.67 34.38 3.66
3712 3735 0.394565 GAGACAGGCTGTTCCAGTGT 59.605 55.000 22.98 0.00 34.38 3.55
3713 3736 0.107456 AGACAGGCTGTTCCAGTGTG 59.893 55.000 22.98 0.00 34.38 3.82
3714 3737 0.886490 GACAGGCTGTTCCAGTGTGG 60.886 60.000 22.98 0.00 34.38 4.17
3715 3738 1.344953 ACAGGCTGTTCCAGTGTGGA 61.345 55.000 15.88 0.00 46.61 4.02
3722 3745 4.718143 TCCAGTGTGGACCAGACA 57.282 55.556 22.75 2.43 42.67 3.41
3723 3746 2.923619 TCCAGTGTGGACCAGACAA 58.076 52.632 22.75 6.04 42.67 3.18
3724 3747 1.208706 TCCAGTGTGGACCAGACAAA 58.791 50.000 22.75 5.70 42.67 2.83
3725 3748 1.134220 TCCAGTGTGGACCAGACAAAC 60.134 52.381 22.75 4.12 42.67 2.93
3726 3749 1.408127 CCAGTGTGGACCAGACAAACA 60.408 52.381 22.75 0.10 40.96 2.83
3727 3750 2.364632 CAGTGTGGACCAGACAAACAA 58.635 47.619 22.75 0.00 29.61 2.83
3728 3751 2.752354 CAGTGTGGACCAGACAAACAAA 59.248 45.455 22.75 0.00 29.61 2.83
3729 3752 3.192422 CAGTGTGGACCAGACAAACAAAA 59.808 43.478 22.75 0.00 29.61 2.44
3730 3753 4.023291 AGTGTGGACCAGACAAACAAAAT 58.977 39.130 22.75 0.00 29.61 1.82
3731 3754 4.111916 GTGTGGACCAGACAAACAAAATG 58.888 43.478 16.63 0.00 0.00 2.32
3732 3755 3.123050 GTGGACCAGACAAACAAAATGC 58.877 45.455 0.00 0.00 0.00 3.56
3733 3756 2.762887 TGGACCAGACAAACAAAATGCA 59.237 40.909 0.00 0.00 0.00 3.96
3734 3757 3.181477 TGGACCAGACAAACAAAATGCAG 60.181 43.478 0.00 0.00 0.00 4.41
3735 3758 3.181476 GGACCAGACAAACAAAATGCAGT 60.181 43.478 0.00 0.00 0.00 4.40
3736 3759 3.784338 ACCAGACAAACAAAATGCAGTG 58.216 40.909 0.00 0.00 0.00 3.66
3737 3760 3.446873 ACCAGACAAACAAAATGCAGTGA 59.553 39.130 0.00 0.00 0.00 3.41
3738 3761 4.046462 CCAGACAAACAAAATGCAGTGAG 58.954 43.478 0.00 0.00 0.00 3.51
3739 3762 4.440525 CCAGACAAACAAAATGCAGTGAGT 60.441 41.667 0.00 0.00 0.00 3.41
3740 3763 5.221028 CCAGACAAACAAAATGCAGTGAGTA 60.221 40.000 0.00 0.00 0.00 2.59
3741 3764 5.911280 CAGACAAACAAAATGCAGTGAGTAG 59.089 40.000 0.00 0.00 0.00 2.57
3742 3765 5.009010 AGACAAACAAAATGCAGTGAGTAGG 59.991 40.000 0.00 0.00 0.00 3.18
3743 3766 4.887071 ACAAACAAAATGCAGTGAGTAGGA 59.113 37.500 0.00 0.00 0.00 2.94
3744 3767 5.215160 CAAACAAAATGCAGTGAGTAGGAC 58.785 41.667 0.00 0.00 0.00 3.85
3745 3768 4.085357 ACAAAATGCAGTGAGTAGGACA 57.915 40.909 0.00 0.00 0.00 4.02
3746 3769 4.067896 ACAAAATGCAGTGAGTAGGACAG 58.932 43.478 0.00 0.00 0.00 3.51
3747 3770 2.393271 AATGCAGTGAGTAGGACAGC 57.607 50.000 0.00 0.00 0.00 4.40
3748 3771 1.566211 ATGCAGTGAGTAGGACAGCT 58.434 50.000 0.00 0.00 0.00 4.24
3749 3772 2.215942 TGCAGTGAGTAGGACAGCTA 57.784 50.000 0.00 0.00 0.00 3.32
3750 3773 1.819288 TGCAGTGAGTAGGACAGCTAC 59.181 52.381 0.00 0.00 0.00 3.58
3751 3774 1.135333 GCAGTGAGTAGGACAGCTACC 59.865 57.143 0.00 1.37 0.00 3.18
3752 3775 2.729194 CAGTGAGTAGGACAGCTACCT 58.271 52.381 14.64 14.64 41.05 3.08
3753 3776 2.685897 CAGTGAGTAGGACAGCTACCTC 59.314 54.545 13.82 7.41 38.76 3.85
3754 3777 2.025898 GTGAGTAGGACAGCTACCTCC 58.974 57.143 13.82 5.65 38.76 4.30
3755 3778 1.639108 TGAGTAGGACAGCTACCTCCA 59.361 52.381 13.82 8.93 38.76 3.86
3756 3779 2.245028 TGAGTAGGACAGCTACCTCCAT 59.755 50.000 13.82 3.43 38.76 3.41
3757 3780 2.625790 GAGTAGGACAGCTACCTCCATG 59.374 54.545 13.82 0.00 38.76 3.66
3758 3781 2.023888 AGTAGGACAGCTACCTCCATGT 60.024 50.000 13.82 0.00 38.76 3.21
3759 3782 1.490574 AGGACAGCTACCTCCATGTC 58.509 55.000 5.89 0.00 41.03 3.06
3761 3784 1.195115 GACAGCTACCTCCATGTCCA 58.805 55.000 0.00 0.00 36.83 4.02
3762 3785 1.765314 GACAGCTACCTCCATGTCCAT 59.235 52.381 0.00 0.00 36.83 3.41
3763 3786 2.965831 GACAGCTACCTCCATGTCCATA 59.034 50.000 0.00 0.00 36.83 2.74
3764 3787 2.968574 ACAGCTACCTCCATGTCCATAG 59.031 50.000 0.00 0.00 0.00 2.23
3765 3788 2.301296 CAGCTACCTCCATGTCCATAGG 59.699 54.545 0.00 0.00 35.14 2.57
3766 3789 2.090494 AGCTACCTCCATGTCCATAGGT 60.090 50.000 6.89 6.89 44.47 3.08
3767 3790 2.706190 GCTACCTCCATGTCCATAGGTT 59.294 50.000 6.97 0.00 42.34 3.50
3768 3791 3.495100 GCTACCTCCATGTCCATAGGTTG 60.495 52.174 6.97 6.66 42.34 3.77
3769 3792 2.562296 ACCTCCATGTCCATAGGTTGT 58.438 47.619 0.00 0.00 39.32 3.32
3770 3793 3.731431 ACCTCCATGTCCATAGGTTGTA 58.269 45.455 0.00 0.00 39.32 2.41
3771 3794 4.108570 ACCTCCATGTCCATAGGTTGTAA 58.891 43.478 0.00 0.00 39.32 2.41
3772 3795 4.164221 ACCTCCATGTCCATAGGTTGTAAG 59.836 45.833 0.00 0.00 39.32 2.34
3773 3796 4.130118 CTCCATGTCCATAGGTTGTAAGC 58.870 47.826 0.00 0.00 0.00 3.09
3774 3797 3.780294 TCCATGTCCATAGGTTGTAAGCT 59.220 43.478 1.69 1.69 40.36 3.74
3775 3798 4.227300 TCCATGTCCATAGGTTGTAAGCTT 59.773 41.667 3.48 3.48 37.92 3.74
3776 3799 4.576463 CCATGTCCATAGGTTGTAAGCTTC 59.424 45.833 0.00 0.00 37.92 3.86
3777 3800 4.216411 TGTCCATAGGTTGTAAGCTTCC 57.784 45.455 0.00 0.00 37.92 3.46
3778 3801 3.844211 TGTCCATAGGTTGTAAGCTTCCT 59.156 43.478 0.00 5.88 37.92 3.36
3779 3802 4.081087 TGTCCATAGGTTGTAAGCTTCCTC 60.081 45.833 0.00 0.00 37.92 3.71
3780 3803 4.162509 GTCCATAGGTTGTAAGCTTCCTCT 59.837 45.833 0.00 0.00 37.92 3.69
3781 3804 4.162320 TCCATAGGTTGTAAGCTTCCTCTG 59.838 45.833 0.00 6.29 37.92 3.35
3782 3805 2.481289 AGGTTGTAAGCTTCCTCTGC 57.519 50.000 0.00 0.00 31.69 4.26
3783 3806 1.003696 AGGTTGTAAGCTTCCTCTGCC 59.996 52.381 0.00 0.00 31.69 4.85
3784 3807 1.454201 GTTGTAAGCTTCCTCTGCCC 58.546 55.000 0.00 0.00 0.00 5.36
3785 3808 1.003696 GTTGTAAGCTTCCTCTGCCCT 59.996 52.381 0.00 0.00 0.00 5.19
3786 3809 2.236395 GTTGTAAGCTTCCTCTGCCCTA 59.764 50.000 0.00 0.00 0.00 3.53
3787 3810 2.111384 TGTAAGCTTCCTCTGCCCTAG 58.889 52.381 0.00 0.00 0.00 3.02
3788 3811 1.414550 GTAAGCTTCCTCTGCCCTAGG 59.585 57.143 0.00 0.06 35.26 3.02
3789 3812 0.252927 AAGCTTCCTCTGCCCTAGGT 60.253 55.000 8.29 0.00 35.48 3.08
3790 3813 0.689412 AGCTTCCTCTGCCCTAGGTC 60.689 60.000 8.29 0.00 35.48 3.85
3791 3814 0.978146 GCTTCCTCTGCCCTAGGTCA 60.978 60.000 8.29 0.00 35.48 4.02
3792 3815 1.573108 CTTCCTCTGCCCTAGGTCAA 58.427 55.000 8.29 0.00 35.48 3.18
3793 3816 2.122768 CTTCCTCTGCCCTAGGTCAAT 58.877 52.381 8.29 0.00 35.48 2.57
3794 3817 1.794714 TCCTCTGCCCTAGGTCAATC 58.205 55.000 8.29 0.00 35.48 2.67
3795 3818 1.008327 TCCTCTGCCCTAGGTCAATCA 59.992 52.381 8.29 0.00 35.48 2.57
3796 3819 1.139853 CCTCTGCCCTAGGTCAATCAC 59.860 57.143 8.29 0.00 0.00 3.06
3797 3820 1.833630 CTCTGCCCTAGGTCAATCACA 59.166 52.381 8.29 0.00 0.00 3.58
3798 3821 2.237143 CTCTGCCCTAGGTCAATCACAA 59.763 50.000 8.29 0.00 0.00 3.33
3799 3822 2.642311 TCTGCCCTAGGTCAATCACAAA 59.358 45.455 8.29 0.00 0.00 2.83
3800 3823 3.266772 TCTGCCCTAGGTCAATCACAAAT 59.733 43.478 8.29 0.00 0.00 2.32
3801 3824 3.355378 TGCCCTAGGTCAATCACAAATG 58.645 45.455 8.29 0.00 0.00 2.32
3802 3825 3.245229 TGCCCTAGGTCAATCACAAATGT 60.245 43.478 8.29 0.00 0.00 2.71
3803 3826 4.018870 TGCCCTAGGTCAATCACAAATGTA 60.019 41.667 8.29 0.00 0.00 2.29
3804 3827 4.335594 GCCCTAGGTCAATCACAAATGTAC 59.664 45.833 8.29 0.00 0.00 2.90
3805 3828 4.881850 CCCTAGGTCAATCACAAATGTACC 59.118 45.833 8.29 0.00 0.00 3.34
3806 3829 5.496556 CCTAGGTCAATCACAAATGTACCA 58.503 41.667 0.00 0.00 0.00 3.25
3807 3830 5.943416 CCTAGGTCAATCACAAATGTACCAA 59.057 40.000 0.00 0.00 0.00 3.67
3808 3831 6.603201 CCTAGGTCAATCACAAATGTACCAAT 59.397 38.462 0.00 0.00 0.00 3.16
3809 3832 6.515272 AGGTCAATCACAAATGTACCAATC 57.485 37.500 5.50 0.00 0.00 2.67
3840 3863 8.085296 AGCGATTTGTAATCGAGATATTCTCTT 58.915 33.333 21.88 0.00 41.26 2.85
3841 3864 8.159077 GCGATTTGTAATCGAGATATTCTCTTG 58.841 37.037 21.88 0.00 41.26 3.02
3842 3865 9.186323 CGATTTGTAATCGAGATATTCTCTTGT 57.814 33.333 14.74 0.00 41.26 3.16
3844 3867 7.700322 TTGTAATCGAGATATTCTCTTGTGC 57.300 36.000 3.27 0.00 41.26 4.57
3845 3868 5.915196 TGTAATCGAGATATTCTCTTGTGCG 59.085 40.000 3.27 0.00 41.26 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 5.734031 AATTCTTTCTGCCTAACCCCTAT 57.266 39.130 0.00 0.00 0.00 2.57
15 16 5.530176 AAATTCTTTCTGCCTAACCCCTA 57.470 39.130 0.00 0.00 0.00 3.53
17 18 6.791867 ATAAAATTCTTTCTGCCTAACCCC 57.208 37.500 0.00 0.00 0.00 4.95
21 22 9.479549 AGATGGAATAAAATTCTTTCTGCCTAA 57.520 29.630 0.11 0.00 0.00 2.69
22 23 9.479549 AAGATGGAATAAAATTCTTTCTGCCTA 57.520 29.630 0.11 0.00 0.00 3.93
27 28 9.759473 TCCTGAAGATGGAATAAAATTCTTTCT 57.241 29.630 0.11 0.95 0.00 2.52
29 30 8.975295 CCTCCTGAAGATGGAATAAAATTCTTT 58.025 33.333 0.11 0.00 32.61 2.52
37 38 3.117888 GTGGCCTCCTGAAGATGGAATAA 60.118 47.826 3.32 0.00 32.61 1.40
50 51 1.406065 CGAGATGATGGTGGCCTCCT 61.406 60.000 23.90 10.14 0.00 3.69
53 54 2.507944 GCGAGATGATGGTGGCCT 59.492 61.111 3.32 0.00 0.00 5.19
54 55 2.592861 GGCGAGATGATGGTGGCC 60.593 66.667 0.00 0.00 0.00 5.36
58 59 1.489481 TCAGAAGGCGAGATGATGGT 58.511 50.000 0.00 0.00 0.00 3.55
62 63 1.685517 CCTGATCAGAAGGCGAGATGA 59.314 52.381 24.62 0.00 0.00 2.92
101 103 7.357303 GCTCCGTTTTTAGATGTTACTTTCAA 58.643 34.615 0.00 0.00 0.00 2.69
103 105 6.312487 GGCTCCGTTTTTAGATGTTACTTTC 58.688 40.000 0.00 0.00 0.00 2.62
130 132 4.684623 CCAGCCCTTATTGGTGGG 57.315 61.111 0.65 0.00 45.45 4.61
136 138 0.853530 GGTGGATCCCAGCCCTTATT 59.146 55.000 9.90 0.00 45.22 1.40
138 140 4.083155 GGTGGATCCCAGCCCTTA 57.917 61.111 9.90 0.00 45.22 2.69
144 146 1.450312 GAGTTGCGGTGGATCCCAG 60.450 63.158 9.90 2.62 32.34 4.45
158 160 1.551019 GGCCTTAGGGTCACGGAGTT 61.551 60.000 0.00 0.00 37.14 3.01
213 216 3.061369 AGTTTAGGTTTTCTCCACCCCT 58.939 45.455 0.00 0.00 34.44 4.79
218 221 2.974099 TCCCGAGTTTAGGTTTTCTCCA 59.026 45.455 0.00 0.00 0.00 3.86
227 230 0.824759 CCTCCTGTCCCGAGTTTAGG 59.175 60.000 0.00 0.00 0.00 2.69
238 241 2.409948 ATAGCAAACTGCCTCCTGTC 57.590 50.000 0.00 0.00 46.52 3.51
248 251 3.254060 CGATAGCCGCATATAGCAAACT 58.746 45.455 0.00 0.00 46.13 2.66
262 265 1.941668 GCCAGCCATCTAACGATAGCC 60.942 57.143 0.00 0.00 35.25 3.93
264 267 2.353208 GGAGCCAGCCATCTAACGATAG 60.353 54.545 0.00 0.00 46.19 2.08
296 299 0.107165 AAGAAGCATTAGTCCCCGGC 60.107 55.000 0.00 0.00 0.00 6.13
300 303 2.168728 ACGGAGAAGAAGCATTAGTCCC 59.831 50.000 0.00 0.00 0.00 4.46
314 317 1.617322 CGGGATCCATCTACGGAGAA 58.383 55.000 15.23 0.00 38.83 2.87
316 319 0.251209 TCCGGGATCCATCTACGGAG 60.251 60.000 21.01 0.00 44.65 4.63
321 324 1.801242 TTTGCTCCGGGATCCATCTA 58.199 50.000 15.23 0.00 0.00 1.98
325 328 1.134220 GTACATTTGCTCCGGGATCCA 60.134 52.381 15.23 0.00 0.00 3.41
330 333 1.737793 GACTTGTACATTTGCTCCGGG 59.262 52.381 0.00 0.00 0.00 5.73
333 336 2.159653 CGCTGACTTGTACATTTGCTCC 60.160 50.000 0.00 0.00 0.00 4.70
342 345 3.696898 CATCTCCTACGCTGACTTGTAC 58.303 50.000 0.00 0.00 0.00 2.90
344 347 1.134965 GCATCTCCTACGCTGACTTGT 60.135 52.381 0.00 0.00 0.00 3.16
360 363 4.605640 AATCCTGAGAGCTAAGAGCATC 57.394 45.455 0.64 0.00 45.56 3.91
361 364 5.370875 AAAATCCTGAGAGCTAAGAGCAT 57.629 39.130 0.64 0.00 45.56 3.79
362 365 4.833478 AAAATCCTGAGAGCTAAGAGCA 57.167 40.909 0.64 0.00 45.56 4.26
363 366 4.749598 GCTAAAATCCTGAGAGCTAAGAGC 59.250 45.833 0.00 0.00 42.84 4.09
364 367 4.981674 CGCTAAAATCCTGAGAGCTAAGAG 59.018 45.833 0.00 0.00 0.00 2.85
366 369 4.054671 CCGCTAAAATCCTGAGAGCTAAG 58.945 47.826 0.00 0.00 0.00 2.18
369 372 2.102252 CTCCGCTAAAATCCTGAGAGCT 59.898 50.000 0.00 0.00 0.00 4.09
370 373 2.159028 ACTCCGCTAAAATCCTGAGAGC 60.159 50.000 0.00 0.00 0.00 4.09
371 374 3.118956 ACACTCCGCTAAAATCCTGAGAG 60.119 47.826 0.00 0.00 0.00 3.20
373 376 3.190874 GACACTCCGCTAAAATCCTGAG 58.809 50.000 0.00 0.00 0.00 3.35
374 377 2.093658 GGACACTCCGCTAAAATCCTGA 60.094 50.000 0.00 0.00 0.00 3.86
375 378 2.280628 GGACACTCCGCTAAAATCCTG 58.719 52.381 0.00 0.00 0.00 3.86
377 380 2.396590 TGGACACTCCGCTAAAATCC 57.603 50.000 0.00 0.00 40.17 3.01
378 381 3.531538 TGATGGACACTCCGCTAAAATC 58.468 45.455 0.00 0.00 40.17 2.17
379 382 3.627395 TGATGGACACTCCGCTAAAAT 57.373 42.857 0.00 0.00 40.17 1.82
380 383 3.531538 GATGATGGACACTCCGCTAAAA 58.468 45.455 0.00 0.00 40.17 1.52
381 384 2.481276 CGATGATGGACACTCCGCTAAA 60.481 50.000 0.00 0.00 40.17 1.85
382 385 1.067060 CGATGATGGACACTCCGCTAA 59.933 52.381 0.00 0.00 40.17 3.09
383 386 0.668535 CGATGATGGACACTCCGCTA 59.331 55.000 0.00 0.00 40.17 4.26
384 387 1.439228 CGATGATGGACACTCCGCT 59.561 57.895 0.00 0.00 40.17 5.52
385 388 2.240500 GCGATGATGGACACTCCGC 61.241 63.158 0.00 0.00 40.17 5.54
386 389 1.946156 CGCGATGATGGACACTCCG 60.946 63.158 0.00 0.00 40.17 4.63
387 390 1.141881 ACGCGATGATGGACACTCC 59.858 57.895 15.93 0.00 36.96 3.85
388 391 1.756375 GCACGCGATGATGGACACTC 61.756 60.000 15.93 0.00 0.00 3.51
389 392 1.811266 GCACGCGATGATGGACACT 60.811 57.895 15.93 0.00 0.00 3.55
390 393 1.431488 ATGCACGCGATGATGGACAC 61.431 55.000 15.93 0.00 0.00 3.67
391 394 1.153389 ATGCACGCGATGATGGACA 60.153 52.632 15.93 0.81 0.00 4.02
392 395 0.877649 AGATGCACGCGATGATGGAC 60.878 55.000 15.93 0.00 0.00 4.02
393 396 0.179076 AAGATGCACGCGATGATGGA 60.179 50.000 15.93 0.86 0.00 3.41
394 397 0.659427 AAAGATGCACGCGATGATGG 59.341 50.000 15.93 0.00 0.00 3.51
395 398 2.463553 AAAAGATGCACGCGATGATG 57.536 45.000 15.93 0.22 0.00 3.07
396 399 4.818534 ATAAAAAGATGCACGCGATGAT 57.181 36.364 15.93 0.00 0.00 2.45
397 400 5.726729 TTATAAAAAGATGCACGCGATGA 57.273 34.783 15.93 0.00 0.00 2.92
398 401 4.376861 GCTTATAAAAAGATGCACGCGATG 59.623 41.667 15.93 8.90 0.00 3.84
399 402 4.035091 TGCTTATAAAAAGATGCACGCGAT 59.965 37.500 15.93 0.00 0.00 4.58
400 403 3.372514 TGCTTATAAAAAGATGCACGCGA 59.627 39.130 15.93 0.00 0.00 5.87
401 404 3.478516 GTGCTTATAAAAAGATGCACGCG 59.521 43.478 3.53 3.53 40.67 6.01
471 474 1.660019 TTTGGGTCTGCCTTTGGGGA 61.660 55.000 0.00 0.00 37.23 4.81
477 480 2.755952 AACTCTTTTGGGTCTGCCTT 57.244 45.000 0.00 0.00 34.45 4.35
489 492 3.903714 CCCATCCTTCCCAAAAACTCTTT 59.096 43.478 0.00 0.00 0.00 2.52
493 496 1.644509 GCCCATCCTTCCCAAAAACT 58.355 50.000 0.00 0.00 0.00 2.66
495 498 0.192064 TGGCCCATCCTTCCCAAAAA 59.808 50.000 0.00 0.00 35.26 1.94
500 503 2.043953 GTGTGGCCCATCCTTCCC 60.044 66.667 0.00 0.00 35.26 3.97
561 565 1.000171 GCTGGGCCTCAAAAGTTTCTG 60.000 52.381 4.53 0.00 0.00 3.02
564 568 1.043022 CTGCTGGGCCTCAAAAGTTT 58.957 50.000 4.53 0.00 0.00 2.66
624 630 2.028766 GAGTCGTGCGGTCGATCGTA 62.029 60.000 20.75 13.29 41.78 3.43
625 631 3.378331 GAGTCGTGCGGTCGATCGT 62.378 63.158 20.75 0.00 41.78 3.73
626 632 2.648102 GAGTCGTGCGGTCGATCG 60.648 66.667 15.15 15.15 41.78 3.69
653 659 9.417561 TCCTAGTGCTAATACTACTACAATTGT 57.582 33.333 16.68 16.68 32.19 2.71
658 664 7.146715 AGGTCCTAGTGCTAATACTACTACA 57.853 40.000 0.00 0.00 32.19 2.74
747 753 2.357517 CTTCCTGTCTTGCGCCGT 60.358 61.111 4.18 0.00 0.00 5.68
748 754 3.121030 CCTTCCTGTCTTGCGCCG 61.121 66.667 4.18 0.00 0.00 6.46
749 755 3.435186 GCCTTCCTGTCTTGCGCC 61.435 66.667 4.18 0.00 0.00 6.53
750 756 2.260869 TTGCCTTCCTGTCTTGCGC 61.261 57.895 0.00 0.00 0.00 6.09
751 757 1.576421 GTTGCCTTCCTGTCTTGCG 59.424 57.895 0.00 0.00 0.00 4.85
752 758 1.856265 CGGTTGCCTTCCTGTCTTGC 61.856 60.000 0.00 0.00 0.00 4.01
753 759 1.237285 CCGGTTGCCTTCCTGTCTTG 61.237 60.000 0.00 0.00 0.00 3.02
754 760 1.073199 CCGGTTGCCTTCCTGTCTT 59.927 57.895 0.00 0.00 0.00 3.01
869 875 6.012658 TGAGATCGGTTCAAAATTTTGAGG 57.987 37.500 27.52 21.38 46.68 3.86
891 897 8.761575 AACCAATTTCATATTTTACAGTGCTG 57.238 30.769 0.00 0.00 0.00 4.41
956 962 6.202570 GCAATTCACTAGCAAATCCAACAAAA 59.797 34.615 0.00 0.00 0.00 2.44
970 976 5.048782 AGCGAGAGAGATAGCAATTCACTAG 60.049 44.000 0.00 0.00 0.00 2.57
982 988 2.552599 ACGATCCAGCGAGAGAGATA 57.447 50.000 0.00 0.00 34.83 1.98
994 1000 1.605232 ACGTCGCACATATACGATCCA 59.395 47.619 2.14 0.00 40.90 3.41
1011 1017 4.193826 ACAAGTGATGAAGCTATGACGT 57.806 40.909 0.00 0.00 0.00 4.34
1047 1053 3.056821 CCGGCGAAGGACATGATAGATTA 60.057 47.826 9.30 0.00 0.00 1.75
1231 1237 3.321396 GGGGTAGTACAAGATACTCCAGC 59.679 52.174 2.06 0.00 41.46 4.85
1404 1410 8.115490 CAGTCTTGGAACTCAAATATTTCCTT 57.885 34.615 0.00 0.00 37.70 3.36
1520 1526 4.715523 ACATCCCCCGCCACAACG 62.716 66.667 0.00 0.00 0.00 4.10
1810 1816 1.066143 CAGGGAAAGGTAGCGTGTCAT 60.066 52.381 0.00 0.00 0.00 3.06
2189 2201 8.717717 TCCTAATCATCAAGGACATAAACAGAT 58.282 33.333 0.00 0.00 36.97 2.90
2290 2308 1.271102 GCAGCCCGTTCCAAATTGTTA 59.729 47.619 0.00 0.00 0.00 2.41
2291 2309 0.033366 GCAGCCCGTTCCAAATTGTT 59.967 50.000 0.00 0.00 0.00 2.83
2300 2318 0.948678 TGTTTTACAGCAGCCCGTTC 59.051 50.000 0.00 0.00 0.00 3.95
2305 2323 1.066908 TGCAGTTGTTTTACAGCAGCC 59.933 47.619 8.15 0.00 40.16 4.85
2320 2338 8.707796 TTAACTACCTAGCTAATAGATGCAGT 57.292 34.615 15.45 0.50 32.76 4.40
2386 2404 5.260424 TGGCAAACAGGATAGAAGCATTTA 58.740 37.500 0.00 0.00 0.00 1.40
2430 2448 5.765182 AGTCTCAGTGGTTTGTTAAATCCAG 59.235 40.000 0.00 0.00 0.00 3.86
2432 2450 6.635030 AAGTCTCAGTGGTTTGTTAAATCC 57.365 37.500 0.00 0.00 0.00 3.01
2487 2505 5.230097 GCGTGTTCTTGAAAAAGAAAAGAGG 59.770 40.000 2.63 0.00 40.15 3.69
2489 2507 5.704888 TGCGTGTTCTTGAAAAAGAAAAGA 58.295 33.333 2.63 0.00 40.15 2.52
2490 2508 6.307800 TCTTGCGTGTTCTTGAAAAAGAAAAG 59.692 34.615 2.63 3.67 40.15 2.27
2491 2509 6.153067 TCTTGCGTGTTCTTGAAAAAGAAAA 58.847 32.000 2.63 0.00 40.15 2.29
2542 2560 7.932335 TCTTTTCTGTATACTCGATTCCTCTC 58.068 38.462 4.17 0.00 0.00 3.20
2556 2574 7.178274 TGCCACCAATGTAAATCTTTTCTGTAT 59.822 33.333 0.00 0.00 0.00 2.29
2606 2624 2.301870 TGACTACTTTAGGCTGGTGTGG 59.698 50.000 0.00 0.00 33.94 4.17
2614 2632 4.739195 CTGAGAGTGTGACTACTTTAGGC 58.261 47.826 0.00 0.00 0.00 3.93
2623 2641 1.418334 AAGTGGCTGAGAGTGTGACT 58.582 50.000 0.00 0.00 0.00 3.41
2720 2738 7.733402 TGTGCTAGTTTTCGGTTAAATACTT 57.267 32.000 0.00 0.00 0.00 2.24
2746 2764 3.634397 TTTTTGCCATGGTTGGTTGAA 57.366 38.095 14.67 0.00 45.57 2.69
2798 2816 9.189723 CGGTATAAATTAGAGCTAAAGTGGTAC 57.810 37.037 0.00 0.00 0.00 3.34
2985 3007 8.390354 TGATAGAAGCATTTCTGATTGTTTACG 58.610 33.333 0.00 0.00 43.41 3.18
2995 3017 7.578852 TCGCAAATATGATAGAAGCATTTCTG 58.421 34.615 0.00 0.00 43.41 3.02
3066 3088 6.061441 TGAAAACTGCTGAGTTCCTAATTCA 58.939 36.000 0.00 0.00 41.87 2.57
3175 3198 7.285788 GTTGCTTGCATGTTTCTGAAAATAAG 58.714 34.615 4.09 6.58 0.00 1.73
3179 3202 3.551082 CGTTGCTTGCATGTTTCTGAAAA 59.449 39.130 4.09 0.00 0.00 2.29
3260 3283 7.611467 TGGAGACTGCTACAAATCATAAACATT 59.389 33.333 0.00 0.00 30.05 2.71
3284 3307 3.100545 AGTGTGCCACTGAAGTTGG 57.899 52.632 7.00 0.00 43.63 3.77
3302 3325 2.282391 GCAGATGTGTGTGGGCCA 60.282 61.111 0.00 0.00 0.00 5.36
3382 3405 1.202806 ACTGTGTGGAACTGTGGATGG 60.203 52.381 0.00 0.00 39.29 3.51
3434 3457 6.887626 AGGTAGTTAGCATAGAGTTAGCTC 57.112 41.667 0.00 0.00 39.68 4.09
3435 3458 8.943594 ATAAGGTAGTTAGCATAGAGTTAGCT 57.056 34.615 0.00 0.00 42.14 3.32
3442 3465 9.824216 AGGTCATAATAAGGTAGTTAGCATAGA 57.176 33.333 0.00 0.00 0.00 1.98
3445 3468 9.780186 GAAAGGTCATAATAAGGTAGTTAGCAT 57.220 33.333 0.00 0.00 0.00 3.79
3446 3469 8.989131 AGAAAGGTCATAATAAGGTAGTTAGCA 58.011 33.333 0.00 0.00 0.00 3.49
3447 3470 9.478768 GAGAAAGGTCATAATAAGGTAGTTAGC 57.521 37.037 0.00 0.00 0.00 3.09
3448 3471 9.984190 GGAGAAAGGTCATAATAAGGTAGTTAG 57.016 37.037 0.00 0.00 0.00 2.34
3449 3472 9.496710 TGGAGAAAGGTCATAATAAGGTAGTTA 57.503 33.333 0.00 0.00 0.00 2.24
3450 3473 8.388656 TGGAGAAAGGTCATAATAAGGTAGTT 57.611 34.615 0.00 0.00 0.00 2.24
3451 3474 7.989947 TGGAGAAAGGTCATAATAAGGTAGT 57.010 36.000 0.00 0.00 0.00 2.73
3457 3480 9.639563 TGCAAATATGGAGAAAGGTCATAATAA 57.360 29.630 0.00 0.00 0.00 1.40
3480 3503 8.691797 GGACTGGGTATATTTAAATTTTCTGCA 58.308 33.333 5.91 0.00 0.00 4.41
3481 3504 8.691797 TGGACTGGGTATATTTAAATTTTCTGC 58.308 33.333 5.91 0.00 0.00 4.26
3495 3518 9.928618 TGATAATTCAAATTTGGACTGGGTATA 57.071 29.630 17.90 0.00 0.00 1.47
3496 3519 8.837099 TGATAATTCAAATTTGGACTGGGTAT 57.163 30.769 17.90 6.71 0.00 2.73
3497 3520 8.657387 TTGATAATTCAAATTTGGACTGGGTA 57.343 30.769 17.90 2.58 38.90 3.69
3498 3521 7.552050 TTGATAATTCAAATTTGGACTGGGT 57.448 32.000 17.90 0.00 38.90 4.51
3541 3564 3.753272 CCAACCCATCCATCGATACATTC 59.247 47.826 0.00 0.00 0.00 2.67
3542 3565 3.498481 CCCAACCCATCCATCGATACATT 60.498 47.826 0.00 0.00 0.00 2.71
3543 3566 2.040278 CCCAACCCATCCATCGATACAT 59.960 50.000 0.00 0.00 0.00 2.29
3544 3567 1.419762 CCCAACCCATCCATCGATACA 59.580 52.381 0.00 0.00 0.00 2.29
3545 3568 1.420138 ACCCAACCCATCCATCGATAC 59.580 52.381 0.00 0.00 0.00 2.24
3546 3569 1.814429 ACCCAACCCATCCATCGATA 58.186 50.000 0.00 0.00 0.00 2.92
3547 3570 0.926293 AACCCAACCCATCCATCGAT 59.074 50.000 0.00 0.00 0.00 3.59
3548 3571 0.034574 CAACCCAACCCATCCATCGA 60.035 55.000 0.00 0.00 0.00 3.59
3549 3572 0.323360 ACAACCCAACCCATCCATCG 60.323 55.000 0.00 0.00 0.00 3.84
3550 3573 1.272425 TGACAACCCAACCCATCCATC 60.272 52.381 0.00 0.00 0.00 3.51
3551 3574 0.783206 TGACAACCCAACCCATCCAT 59.217 50.000 0.00 0.00 0.00 3.41
3552 3575 0.178975 GTGACAACCCAACCCATCCA 60.179 55.000 0.00 0.00 0.00 3.41
3553 3576 0.178975 TGTGACAACCCAACCCATCC 60.179 55.000 0.00 0.00 0.00 3.51
3554 3577 1.247567 CTGTGACAACCCAACCCATC 58.752 55.000 0.00 0.00 0.00 3.51
3555 3578 0.827507 GCTGTGACAACCCAACCCAT 60.828 55.000 0.00 0.00 0.00 4.00
3556 3579 1.454847 GCTGTGACAACCCAACCCA 60.455 57.895 0.00 0.00 0.00 4.51
3557 3580 2.200337 GGCTGTGACAACCCAACCC 61.200 63.158 0.00 0.00 0.00 4.11
3558 3581 0.827507 ATGGCTGTGACAACCCAACC 60.828 55.000 8.44 0.00 0.00 3.77
3559 3582 0.314935 CATGGCTGTGACAACCCAAC 59.685 55.000 8.44 0.00 0.00 3.77
3560 3583 0.184692 TCATGGCTGTGACAACCCAA 59.815 50.000 8.44 0.00 0.00 4.12
3561 3584 0.250858 CTCATGGCTGTGACAACCCA 60.251 55.000 2.09 4.86 0.00 4.51
3562 3585 0.036732 TCTCATGGCTGTGACAACCC 59.963 55.000 2.09 0.00 0.00 4.11
3563 3586 2.119801 ATCTCATGGCTGTGACAACC 57.880 50.000 0.00 0.00 0.00 3.77
3564 3587 3.829948 CAAATCTCATGGCTGTGACAAC 58.170 45.455 0.00 0.00 0.00 3.32
3565 3588 2.229543 GCAAATCTCATGGCTGTGACAA 59.770 45.455 0.00 0.00 0.00 3.18
3566 3589 1.814394 GCAAATCTCATGGCTGTGACA 59.186 47.619 0.00 0.00 0.00 3.58
3567 3590 1.814394 TGCAAATCTCATGGCTGTGAC 59.186 47.619 0.00 0.00 0.00 3.67
3568 3591 1.814394 GTGCAAATCTCATGGCTGTGA 59.186 47.619 0.00 0.00 0.00 3.58
3569 3592 1.542472 TGTGCAAATCTCATGGCTGTG 59.458 47.619 0.00 0.00 0.00 3.66
3570 3593 1.542915 GTGTGCAAATCTCATGGCTGT 59.457 47.619 0.00 0.00 0.00 4.40
3571 3594 1.542472 TGTGTGCAAATCTCATGGCTG 59.458 47.619 0.00 0.00 0.00 4.85
3572 3595 1.913778 TGTGTGCAAATCTCATGGCT 58.086 45.000 0.00 0.00 0.00 4.75
3573 3596 2.953466 ATGTGTGCAAATCTCATGGC 57.047 45.000 0.00 0.00 0.00 4.40
3574 3597 6.695713 CAGAATAATGTGTGCAAATCTCATGG 59.304 38.462 0.00 0.00 0.00 3.66
3575 3598 6.198403 GCAGAATAATGTGTGCAAATCTCATG 59.802 38.462 0.00 0.00 35.91 3.07
3576 3599 6.270815 GCAGAATAATGTGTGCAAATCTCAT 58.729 36.000 0.00 0.00 35.91 2.90
3577 3600 5.643664 GCAGAATAATGTGTGCAAATCTCA 58.356 37.500 0.00 0.00 35.91 3.27
3578 3601 4.731961 CGCAGAATAATGTGTGCAAATCTC 59.268 41.667 0.00 0.00 35.57 2.75
3579 3602 4.156556 ACGCAGAATAATGTGTGCAAATCT 59.843 37.500 0.00 0.00 42.14 2.40
3580 3603 4.414852 ACGCAGAATAATGTGTGCAAATC 58.585 39.130 0.00 0.00 42.14 2.17
3581 3604 4.439305 ACGCAGAATAATGTGTGCAAAT 57.561 36.364 0.00 0.00 42.14 2.32
3582 3605 3.913548 ACGCAGAATAATGTGTGCAAA 57.086 38.095 0.00 0.00 42.14 3.68
3583 3606 4.201901 CCATACGCAGAATAATGTGTGCAA 60.202 41.667 3.32 0.00 43.47 4.08
3584 3607 3.312146 CCATACGCAGAATAATGTGTGCA 59.688 43.478 3.32 0.00 43.47 4.57
3585 3608 3.849645 GCCATACGCAGAATAATGTGTGC 60.850 47.826 3.32 0.00 43.47 4.57
3586 3609 3.561310 AGCCATACGCAGAATAATGTGTG 59.439 43.478 3.32 0.00 43.47 3.82
3587 3610 3.808728 AGCCATACGCAGAATAATGTGT 58.191 40.909 0.00 0.00 45.45 3.72
3588 3611 4.143030 GCTAGCCATACGCAGAATAATGTG 60.143 45.833 2.29 0.00 41.38 3.21
3589 3612 3.997021 GCTAGCCATACGCAGAATAATGT 59.003 43.478 2.29 0.00 41.38 2.71
3590 3613 4.248859 AGCTAGCCATACGCAGAATAATG 58.751 43.478 12.13 0.00 41.38 1.90
3591 3614 4.543590 AGCTAGCCATACGCAGAATAAT 57.456 40.909 12.13 0.00 41.38 1.28
3592 3615 4.058124 CAAGCTAGCCATACGCAGAATAA 58.942 43.478 12.13 0.00 41.38 1.40
3593 3616 3.554960 CCAAGCTAGCCATACGCAGAATA 60.555 47.826 12.13 0.00 41.38 1.75
3594 3617 2.487934 CAAGCTAGCCATACGCAGAAT 58.512 47.619 12.13 0.00 41.38 2.40
3595 3618 1.473257 CCAAGCTAGCCATACGCAGAA 60.473 52.381 12.13 0.00 41.38 3.02
3596 3619 0.104855 CCAAGCTAGCCATACGCAGA 59.895 55.000 12.13 0.00 41.38 4.26
3597 3620 0.882042 CCCAAGCTAGCCATACGCAG 60.882 60.000 12.13 0.00 41.38 5.18
3598 3621 1.146041 CCCAAGCTAGCCATACGCA 59.854 57.895 12.13 0.00 41.38 5.24
3599 3622 1.598130 CCCCAAGCTAGCCATACGC 60.598 63.158 12.13 0.00 37.98 4.42
3600 3623 0.468226 TTCCCCAAGCTAGCCATACG 59.532 55.000 12.13 0.00 0.00 3.06
3601 3624 1.490910 AGTTCCCCAAGCTAGCCATAC 59.509 52.381 12.13 0.53 0.00 2.39
3602 3625 1.490490 CAGTTCCCCAAGCTAGCCATA 59.510 52.381 12.13 0.00 0.00 2.74
3603 3626 0.257039 CAGTTCCCCAAGCTAGCCAT 59.743 55.000 12.13 0.00 0.00 4.40
3604 3627 1.133809 ACAGTTCCCCAAGCTAGCCA 61.134 55.000 12.13 0.00 0.00 4.75
3605 3628 0.393132 GACAGTTCCCCAAGCTAGCC 60.393 60.000 12.13 0.00 0.00 3.93
3606 3629 0.324943 TGACAGTTCCCCAAGCTAGC 59.675 55.000 6.62 6.62 0.00 3.42
3607 3630 2.026822 ACATGACAGTTCCCCAAGCTAG 60.027 50.000 0.00 0.00 0.00 3.42
3608 3631 1.985159 ACATGACAGTTCCCCAAGCTA 59.015 47.619 0.00 0.00 0.00 3.32
3609 3632 0.773644 ACATGACAGTTCCCCAAGCT 59.226 50.000 0.00 0.00 0.00 3.74
3610 3633 1.168714 GACATGACAGTTCCCCAAGC 58.831 55.000 0.00 0.00 0.00 4.01
3611 3634 2.816087 CAAGACATGACAGTTCCCCAAG 59.184 50.000 0.00 0.00 0.00 3.61
3612 3635 2.174639 ACAAGACATGACAGTTCCCCAA 59.825 45.455 0.00 0.00 0.00 4.12
3613 3636 1.774254 ACAAGACATGACAGTTCCCCA 59.226 47.619 0.00 0.00 0.00 4.96
3614 3637 2.427506 GACAAGACATGACAGTTCCCC 58.572 52.381 0.00 0.00 0.00 4.81
3615 3638 2.069273 CGACAAGACATGACAGTTCCC 58.931 52.381 0.00 0.00 0.00 3.97
3616 3639 1.461127 GCGACAAGACATGACAGTTCC 59.539 52.381 0.00 0.00 0.00 3.62
3617 3640 1.461127 GGCGACAAGACATGACAGTTC 59.539 52.381 0.00 0.00 0.00 3.01
3618 3641 1.512926 GGCGACAAGACATGACAGTT 58.487 50.000 0.00 0.00 0.00 3.16
3619 3642 0.667487 CGGCGACAAGACATGACAGT 60.667 55.000 0.00 0.00 0.00 3.55
3620 3643 0.667487 ACGGCGACAAGACATGACAG 60.667 55.000 16.62 0.00 0.00 3.51
3621 3644 0.666274 GACGGCGACAAGACATGACA 60.666 55.000 16.62 0.00 0.00 3.58
3622 3645 1.674611 CGACGGCGACAAGACATGAC 61.675 60.000 16.62 0.00 40.82 3.06
3623 3646 1.443702 CGACGGCGACAAGACATGA 60.444 57.895 16.62 0.00 40.82 3.07
3624 3647 1.443702 TCGACGGCGACAAGACATG 60.444 57.895 10.67 0.00 42.51 3.21
3625 3648 2.959372 TCGACGGCGACAAGACAT 59.041 55.556 10.67 0.00 42.51 3.06
3633 3656 0.800683 CTTAGCAATGTCGACGGCGA 60.801 55.000 10.67 10.67 45.71 5.54
3634 3657 1.631072 CTTAGCAATGTCGACGGCG 59.369 57.895 2.87 2.87 39.35 6.46
3635 3658 2.006772 CCTTAGCAATGTCGACGGC 58.993 57.895 11.62 14.25 0.00 5.68
3636 3659 1.429148 GGCCTTAGCAATGTCGACGG 61.429 60.000 11.62 4.26 42.56 4.79
3637 3660 1.752501 CGGCCTTAGCAATGTCGACG 61.753 60.000 11.62 0.00 42.56 5.12
3638 3661 0.459585 TCGGCCTTAGCAATGTCGAC 60.460 55.000 9.11 9.11 42.56 4.20
3639 3662 0.248012 TTCGGCCTTAGCAATGTCGA 59.752 50.000 0.00 0.00 42.56 4.20
3640 3663 1.083489 TTTCGGCCTTAGCAATGTCG 58.917 50.000 0.00 0.00 42.56 4.35
3641 3664 1.132453 GGTTTCGGCCTTAGCAATGTC 59.868 52.381 0.00 0.00 42.56 3.06
3642 3665 1.173913 GGTTTCGGCCTTAGCAATGT 58.826 50.000 0.00 0.00 42.56 2.71
3643 3666 1.463674 AGGTTTCGGCCTTAGCAATG 58.536 50.000 0.00 0.00 42.56 2.82
3644 3667 1.818674 CAAGGTTTCGGCCTTAGCAAT 59.181 47.619 0.00 0.00 46.33 3.56
3645 3668 1.243902 CAAGGTTTCGGCCTTAGCAA 58.756 50.000 0.00 0.00 46.33 3.91
3646 3669 0.109723 ACAAGGTTTCGGCCTTAGCA 59.890 50.000 0.00 0.00 46.33 3.49
3647 3670 0.521735 CACAAGGTTTCGGCCTTAGC 59.478 55.000 0.00 0.00 46.33 3.09
3648 3671 1.535462 CACACAAGGTTTCGGCCTTAG 59.465 52.381 0.00 5.81 46.33 2.18
3649 3672 1.141254 TCACACAAGGTTTCGGCCTTA 59.859 47.619 0.00 0.00 46.33 2.69
3651 3674 0.110486 ATCACACAAGGTTTCGGCCT 59.890 50.000 0.00 0.00 41.41 5.19
3652 3675 0.240945 CATCACACAAGGTTTCGGCC 59.759 55.000 0.00 0.00 0.00 6.13
3653 3676 0.951558 ACATCACACAAGGTTTCGGC 59.048 50.000 0.00 0.00 0.00 5.54
3654 3677 2.159627 GCTACATCACACAAGGTTTCGG 59.840 50.000 0.00 0.00 0.00 4.30
3655 3678 2.159627 GGCTACATCACACAAGGTTTCG 59.840 50.000 0.00 0.00 0.00 3.46
3656 3679 3.146066 TGGCTACATCACACAAGGTTTC 58.854 45.455 0.00 0.00 0.00 2.78
3657 3680 3.222173 TGGCTACATCACACAAGGTTT 57.778 42.857 0.00 0.00 0.00 3.27
3658 3681 2.949177 TGGCTACATCACACAAGGTT 57.051 45.000 0.00 0.00 0.00 3.50
3659 3682 2.305635 TCATGGCTACATCACACAAGGT 59.694 45.455 0.00 0.00 34.35 3.50
3660 3683 2.989909 TCATGGCTACATCACACAAGG 58.010 47.619 0.00 0.00 34.35 3.61
3661 3684 4.272748 CAGATCATGGCTACATCACACAAG 59.727 45.833 0.00 0.00 34.35 3.16
3662 3685 4.080975 TCAGATCATGGCTACATCACACAA 60.081 41.667 0.00 0.00 34.35 3.33
3663 3686 3.451902 TCAGATCATGGCTACATCACACA 59.548 43.478 0.00 0.00 34.35 3.72
3664 3687 4.063998 TCAGATCATGGCTACATCACAC 57.936 45.455 0.00 0.00 34.35 3.82
3665 3688 4.591924 AGATCAGATCATGGCTACATCACA 59.408 41.667 13.14 0.00 34.35 3.58
3666 3689 5.149973 AGATCAGATCATGGCTACATCAC 57.850 43.478 13.14 0.00 34.35 3.06
3667 3690 5.186603 GGTAGATCAGATCATGGCTACATCA 59.813 44.000 13.14 0.00 38.17 3.07
3668 3691 5.659463 GGTAGATCAGATCATGGCTACATC 58.341 45.833 13.14 0.00 38.17 3.06
3669 3692 4.159321 CGGTAGATCAGATCATGGCTACAT 59.841 45.833 13.14 0.00 38.17 2.29
3670 3693 3.507622 CGGTAGATCAGATCATGGCTACA 59.492 47.826 13.14 0.00 38.17 2.74
3671 3694 3.119316 CCGGTAGATCAGATCATGGCTAC 60.119 52.174 13.14 5.82 36.90 3.58
3672 3695 3.092301 CCGGTAGATCAGATCATGGCTA 58.908 50.000 13.14 0.00 0.00 3.93
3673 3696 1.898472 CCGGTAGATCAGATCATGGCT 59.102 52.381 13.14 0.00 0.00 4.75
3674 3697 1.895798 TCCGGTAGATCAGATCATGGC 59.104 52.381 13.14 0.00 0.00 4.40
3675 3698 3.192422 GTCTCCGGTAGATCAGATCATGG 59.808 52.174 13.14 8.24 36.36 3.66
3676 3699 3.823304 TGTCTCCGGTAGATCAGATCATG 59.177 47.826 13.14 0.00 36.36 3.07
3677 3700 4.078537 CTGTCTCCGGTAGATCAGATCAT 58.921 47.826 13.14 0.94 36.36 2.45
3678 3701 3.481453 CTGTCTCCGGTAGATCAGATCA 58.519 50.000 13.14 0.00 36.36 2.92
3679 3702 2.817258 CCTGTCTCCGGTAGATCAGATC 59.183 54.545 21.01 1.64 36.36 2.75
3680 3703 2.870175 CCTGTCTCCGGTAGATCAGAT 58.130 52.381 21.01 0.00 36.36 2.90
3681 3704 1.751032 GCCTGTCTCCGGTAGATCAGA 60.751 57.143 21.01 8.76 36.36 3.27
3682 3705 0.671251 GCCTGTCTCCGGTAGATCAG 59.329 60.000 0.00 12.21 36.36 2.90
3683 3706 0.259065 AGCCTGTCTCCGGTAGATCA 59.741 55.000 0.00 4.15 36.36 2.92
3684 3707 0.671251 CAGCCTGTCTCCGGTAGATC 59.329 60.000 0.00 0.00 36.36 2.75
3685 3708 0.033011 ACAGCCTGTCTCCGGTAGAT 60.033 55.000 0.00 0.00 36.36 1.98
3686 3709 0.251653 AACAGCCTGTCTCCGGTAGA 60.252 55.000 0.00 0.00 0.00 2.59
3687 3710 0.173708 GAACAGCCTGTCTCCGGTAG 59.826 60.000 0.00 0.00 0.00 3.18
3688 3711 1.255667 GGAACAGCCTGTCTCCGGTA 61.256 60.000 0.00 0.00 0.00 4.02
3689 3712 2.584391 GGAACAGCCTGTCTCCGGT 61.584 63.158 0.00 0.00 0.00 5.28
3690 3713 2.266055 GGAACAGCCTGTCTCCGG 59.734 66.667 0.00 0.00 0.00 5.14
3691 3714 3.059982 TGGAACAGCCTGTCTCCG 58.940 61.111 16.22 0.00 37.63 4.63
3705 3728 1.134220 GTTTGTCTGGTCCACACTGGA 60.134 52.381 0.00 0.00 45.98 3.86
3706 3729 1.308998 GTTTGTCTGGTCCACACTGG 58.691 55.000 0.00 0.00 39.43 4.00
3707 3730 2.036958 TGTTTGTCTGGTCCACACTG 57.963 50.000 0.00 0.00 0.00 3.66
3708 3731 2.799126 TTGTTTGTCTGGTCCACACT 57.201 45.000 0.00 0.00 0.00 3.55
3709 3732 3.859411 TTTTGTTTGTCTGGTCCACAC 57.141 42.857 0.00 0.00 0.00 3.82
3710 3733 3.430098 GCATTTTGTTTGTCTGGTCCACA 60.430 43.478 0.00 0.00 0.00 4.17
3711 3734 3.123050 GCATTTTGTTTGTCTGGTCCAC 58.877 45.455 0.00 0.00 0.00 4.02
3712 3735 2.762887 TGCATTTTGTTTGTCTGGTCCA 59.237 40.909 0.00 0.00 0.00 4.02
3713 3736 3.181476 ACTGCATTTTGTTTGTCTGGTCC 60.181 43.478 0.00 0.00 0.00 4.46
3714 3737 3.798337 CACTGCATTTTGTTTGTCTGGTC 59.202 43.478 0.00 0.00 0.00 4.02
3715 3738 3.446873 TCACTGCATTTTGTTTGTCTGGT 59.553 39.130 0.00 0.00 0.00 4.00
3716 3739 4.044336 TCACTGCATTTTGTTTGTCTGG 57.956 40.909 0.00 0.00 0.00 3.86
3717 3740 4.675510 ACTCACTGCATTTTGTTTGTCTG 58.324 39.130 0.00 0.00 0.00 3.51
3718 3741 4.989279 ACTCACTGCATTTTGTTTGTCT 57.011 36.364 0.00 0.00 0.00 3.41
3719 3742 5.008613 TCCTACTCACTGCATTTTGTTTGTC 59.991 40.000 0.00 0.00 0.00 3.18
3720 3743 4.887071 TCCTACTCACTGCATTTTGTTTGT 59.113 37.500 0.00 0.00 0.00 2.83
3721 3744 5.215160 GTCCTACTCACTGCATTTTGTTTG 58.785 41.667 0.00 0.00 0.00 2.93
3722 3745 4.887071 TGTCCTACTCACTGCATTTTGTTT 59.113 37.500 0.00 0.00 0.00 2.83
3723 3746 4.460263 TGTCCTACTCACTGCATTTTGTT 58.540 39.130 0.00 0.00 0.00 2.83
3724 3747 4.067896 CTGTCCTACTCACTGCATTTTGT 58.932 43.478 0.00 0.00 0.00 2.83
3725 3748 3.120060 GCTGTCCTACTCACTGCATTTTG 60.120 47.826 0.00 0.00 38.30 2.44
3726 3749 3.077359 GCTGTCCTACTCACTGCATTTT 58.923 45.455 0.00 0.00 38.30 1.82
3727 3750 2.304180 AGCTGTCCTACTCACTGCATTT 59.696 45.455 4.78 0.00 40.24 2.32
3728 3751 1.905215 AGCTGTCCTACTCACTGCATT 59.095 47.619 4.78 0.00 40.24 3.56
3729 3752 1.566211 AGCTGTCCTACTCACTGCAT 58.434 50.000 4.78 0.00 40.24 3.96
3730 3753 1.819288 GTAGCTGTCCTACTCACTGCA 59.181 52.381 0.00 0.00 42.58 4.41
3731 3754 1.135333 GGTAGCTGTCCTACTCACTGC 59.865 57.143 0.00 0.00 44.75 4.40
3732 3755 2.685897 GAGGTAGCTGTCCTACTCACTG 59.314 54.545 11.42 0.00 44.75 3.66
3733 3756 2.357361 GGAGGTAGCTGTCCTACTCACT 60.357 54.545 12.90 0.00 44.75 3.41
3734 3757 2.025898 GGAGGTAGCTGTCCTACTCAC 58.974 57.143 12.90 2.18 44.75 3.51
3735 3758 1.639108 TGGAGGTAGCTGTCCTACTCA 59.361 52.381 18.62 11.94 44.75 3.41
3736 3759 2.438800 TGGAGGTAGCTGTCCTACTC 57.561 55.000 18.62 7.70 44.75 2.59
3737 3760 2.023888 ACATGGAGGTAGCTGTCCTACT 60.024 50.000 18.62 6.07 44.75 2.57
3738 3761 2.362717 GACATGGAGGTAGCTGTCCTAC 59.637 54.545 13.19 13.19 44.66 3.18
3739 3762 2.667470 GACATGGAGGTAGCTGTCCTA 58.333 52.381 11.42 0.00 35.20 2.94
3740 3763 1.490574 GACATGGAGGTAGCTGTCCT 58.509 55.000 11.29 11.29 38.09 3.85
3742 3765 1.195115 TGGACATGGAGGTAGCTGTC 58.805 55.000 0.00 0.94 37.79 3.51
3743 3766 1.885049 ATGGACATGGAGGTAGCTGT 58.115 50.000 0.00 0.00 0.00 4.40
3744 3767 2.301296 CCTATGGACATGGAGGTAGCTG 59.699 54.545 0.00 0.00 0.00 4.24
3745 3768 2.090494 ACCTATGGACATGGAGGTAGCT 60.090 50.000 5.21 0.00 40.59 3.32
3746 3769 2.330216 ACCTATGGACATGGAGGTAGC 58.670 52.381 5.21 0.00 40.59 3.58
3747 3770 3.711704 ACAACCTATGGACATGGAGGTAG 59.288 47.826 7.09 0.00 41.55 3.18
3748 3771 3.731431 ACAACCTATGGACATGGAGGTA 58.269 45.455 7.09 0.00 41.55 3.08
3749 3772 2.562296 ACAACCTATGGACATGGAGGT 58.438 47.619 0.00 1.74 44.35 3.85
3750 3773 4.708177 CTTACAACCTATGGACATGGAGG 58.292 47.826 0.00 0.00 35.05 4.30
3751 3774 4.130118 GCTTACAACCTATGGACATGGAG 58.870 47.826 0.00 0.00 0.00 3.86
3752 3775 3.780294 AGCTTACAACCTATGGACATGGA 59.220 43.478 0.00 0.00 0.00 3.41
3753 3776 4.156455 AGCTTACAACCTATGGACATGG 57.844 45.455 0.00 0.00 0.00 3.66
3754 3777 4.576463 GGAAGCTTACAACCTATGGACATG 59.424 45.833 2.98 0.00 0.00 3.21
3755 3778 4.475016 AGGAAGCTTACAACCTATGGACAT 59.525 41.667 12.25 0.00 0.00 3.06
3756 3779 3.844211 AGGAAGCTTACAACCTATGGACA 59.156 43.478 12.25 0.00 0.00 4.02
3757 3780 4.162509 AGAGGAAGCTTACAACCTATGGAC 59.837 45.833 12.25 0.00 32.53 4.02
3758 3781 4.162320 CAGAGGAAGCTTACAACCTATGGA 59.838 45.833 12.25 0.00 37.87 3.41
3759 3782 4.446371 CAGAGGAAGCTTACAACCTATGG 58.554 47.826 12.25 0.00 37.87 2.74
3760 3783 3.873952 GCAGAGGAAGCTTACAACCTATG 59.126 47.826 17.82 17.82 42.39 2.23
3761 3784 3.118223 GGCAGAGGAAGCTTACAACCTAT 60.118 47.826 12.25 2.05 32.53 2.57
3762 3785 2.236395 GGCAGAGGAAGCTTACAACCTA 59.764 50.000 12.25 0.00 32.53 3.08
3763 3786 1.003696 GGCAGAGGAAGCTTACAACCT 59.996 52.381 12.25 7.88 35.29 3.50
3764 3787 1.454201 GGCAGAGGAAGCTTACAACC 58.546 55.000 12.25 2.22 0.00 3.77
3765 3788 1.003696 AGGGCAGAGGAAGCTTACAAC 59.996 52.381 12.25 4.57 0.00 3.32
3766 3789 1.362224 AGGGCAGAGGAAGCTTACAA 58.638 50.000 12.25 0.00 0.00 2.41
3767 3790 2.111384 CTAGGGCAGAGGAAGCTTACA 58.889 52.381 12.25 0.00 0.00 2.41
3768 3791 1.414550 CCTAGGGCAGAGGAAGCTTAC 59.585 57.143 0.00 0.00 35.99 2.34
3769 3792 1.008449 ACCTAGGGCAGAGGAAGCTTA 59.992 52.381 14.81 0.00 37.53 3.09
3770 3793 0.252927 ACCTAGGGCAGAGGAAGCTT 60.253 55.000 14.81 0.00 37.53 3.74
3771 3794 0.689412 GACCTAGGGCAGAGGAAGCT 60.689 60.000 10.77 0.00 37.53 3.74
3772 3795 0.978146 TGACCTAGGGCAGAGGAAGC 60.978 60.000 15.37 1.38 37.53 3.86
3773 3796 1.573108 TTGACCTAGGGCAGAGGAAG 58.427 55.000 19.03 0.00 37.53 3.46
3774 3797 2.119495 GATTGACCTAGGGCAGAGGAA 58.881 52.381 19.03 2.17 37.53 3.36
3775 3798 1.008327 TGATTGACCTAGGGCAGAGGA 59.992 52.381 19.03 2.64 37.53 3.71
3776 3799 1.139853 GTGATTGACCTAGGGCAGAGG 59.860 57.143 19.03 2.55 40.22 3.69
3777 3800 1.833630 TGTGATTGACCTAGGGCAGAG 59.166 52.381 19.03 0.00 0.00 3.35
3778 3801 1.951209 TGTGATTGACCTAGGGCAGA 58.049 50.000 19.03 9.70 0.00 4.26
3779 3802 2.787473 TTGTGATTGACCTAGGGCAG 57.213 50.000 19.03 0.00 0.00 4.85
3780 3803 3.245229 ACATTTGTGATTGACCTAGGGCA 60.245 43.478 15.37 15.37 0.00 5.36
3781 3804 3.356290 ACATTTGTGATTGACCTAGGGC 58.644 45.455 14.81 11.72 0.00 5.19
3782 3805 4.881850 GGTACATTTGTGATTGACCTAGGG 59.118 45.833 14.81 0.00 0.00 3.53
3783 3806 5.496556 TGGTACATTTGTGATTGACCTAGG 58.503 41.667 7.41 7.41 0.00 3.02
3784 3807 7.201732 GGATTGGTACATTTGTGATTGACCTAG 60.202 40.741 0.00 0.00 39.30 3.02
3785 3808 6.601613 GGATTGGTACATTTGTGATTGACCTA 59.398 38.462 0.00 0.00 39.30 3.08
3786 3809 5.418840 GGATTGGTACATTTGTGATTGACCT 59.581 40.000 0.00 0.00 39.30 3.85
3787 3810 5.418840 AGGATTGGTACATTTGTGATTGACC 59.581 40.000 0.00 0.00 39.30 4.02
3788 3811 6.515272 AGGATTGGTACATTTGTGATTGAC 57.485 37.500 0.00 0.00 39.30 3.18
3789 3812 6.923012 CAAGGATTGGTACATTTGTGATTGA 58.077 36.000 0.00 0.00 43.94 2.57
3802 3825 8.843676 CGATTACAAATCGCTCAAGGATTGGTA 61.844 40.741 8.89 0.00 38.61 3.25
3803 3826 8.104431 CGATTACAAATCGCTCAAGGATTGGT 62.104 42.308 8.89 0.77 40.33 3.67
3804 3827 5.784272 CGATTACAAATCGCTCAAGGATTGG 60.784 44.000 8.89 0.00 39.63 3.16
3805 3828 5.006649 TCGATTACAAATCGCTCAAGGATTG 59.993 40.000 15.33 0.00 43.43 2.67
3806 3829 5.116180 TCGATTACAAATCGCTCAAGGATT 58.884 37.500 15.33 0.00 40.95 3.01
3807 3830 4.693283 TCGATTACAAATCGCTCAAGGAT 58.307 39.130 15.33 0.00 40.95 3.24
3808 3831 4.112634 CTCGATTACAAATCGCTCAAGGA 58.887 43.478 15.33 0.00 40.95 3.36
3809 3832 4.112634 TCTCGATTACAAATCGCTCAAGG 58.887 43.478 15.33 3.99 40.95 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.