Multiple sequence alignment - TraesCS7D01G532100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G532100 chr7D 100.000 3648 0 0 1 3648 626148422 626144775 0.000000e+00 6737.0
1 TraesCS7D01G532100 chr7D 95.665 346 13 2 3305 3648 26493785 26493440 4.120000e-154 555.0
2 TraesCS7D01G532100 chr7A 93.056 1944 87 14 965 2891 722302527 722304439 0.000000e+00 2798.0
3 TraesCS7D01G532100 chr7A 87.500 480 50 4 2825 3304 142465440 142465909 2.480000e-151 545.0
4 TraesCS7D01G532100 chr7A 95.087 346 14 2 3304 3648 16961708 16961365 3.200000e-150 542.0
5 TraesCS7D01G532100 chr7A 83.333 504 74 7 2764 3265 408685084 408685579 1.190000e-124 457.0
6 TraesCS7D01G532100 chr7A 83.135 504 75 7 2764 3265 693379980 693380475 5.550000e-123 451.0
7 TraesCS7D01G532100 chr7A 84.071 226 26 10 3304 3525 629771020 629771239 3.690000e-50 209.0
8 TraesCS7D01G532100 chr7A 91.111 45 3 1 3261 3304 408687697 408687741 3.930000e-05 60.2
9 TraesCS7D01G532100 chr7A 91.111 45 3 1 3261 3304 693382584 693382628 3.930000e-05 60.2
10 TraesCS7D01G532100 chr7B 96.566 990 28 3 959 1942 725983726 725982737 0.000000e+00 1635.0
11 TraesCS7D01G532100 chr7B 95.276 868 35 3 1932 2798 725982717 725981855 0.000000e+00 1371.0
12 TraesCS7D01G532100 chr7B 89.940 497 24 10 1 497 725984629 725984159 5.180000e-173 617.0
13 TraesCS7D01G532100 chr7B 94.134 358 19 1 2799 3156 725980846 725980491 8.910000e-151 544.0
14 TraesCS7D01G532100 chr7B 86.026 229 18 7 495 715 381982769 381982991 2.190000e-57 233.0
15 TraesCS7D01G532100 chr7B 85.153 229 18 9 495 715 494390915 494391135 1.710000e-53 220.0
16 TraesCS7D01G532100 chr7B 84.270 178 22 4 1 173 736882924 736883100 6.260000e-38 169.0
17 TraesCS7D01G532100 chr7B 91.919 99 4 3 870 967 725983981 725983886 6.350000e-28 135.0
18 TraesCS7D01G532100 chr7B 81.503 173 14 9 5 173 641251968 641252126 3.820000e-25 126.0
19 TraesCS7D01G532100 chr7B 91.111 45 3 1 3261 3304 164495936 164495892 3.930000e-05 60.2
20 TraesCS7D01G532100 chr7B 91.111 45 3 1 3261 3304 557452008 557452052 3.930000e-05 60.2
21 TraesCS7D01G532100 chr4B 87.199 539 51 11 2764 3301 253655347 253655868 6.740000e-167 597.0
22 TraesCS7D01G532100 chr4B 86.765 544 54 12 2764 3304 559766719 559766191 1.130000e-164 590.0
23 TraesCS7D01G532100 chr4A 88.186 474 48 4 2831 3304 183998588 183998123 3.180000e-155 558.0
24 TraesCS7D01G532100 chr4A 95.015 341 14 2 3306 3645 716463079 716463417 1.930000e-147 532.0
25 TraesCS7D01G532100 chr2D 94.556 349 14 2 3305 3648 606770874 606771222 5.360000e-148 534.0
26 TraesCS7D01G532100 chr2D 86.029 136 11 7 3303 3435 150382742 150382612 4.910000e-29 139.0
27 TraesCS7D01G532100 chr2D 89.796 49 1 3 3599 3646 470959607 470959562 3.930000e-05 60.2
28 TraesCS7D01G532100 chr6B 83.333 504 74 7 2764 3265 37064991 37065486 1.190000e-124 457.0
29 TraesCS7D01G532100 chr6B 87.295 244 21 6 495 730 442542041 442541800 1.670000e-68 270.0
30 TraesCS7D01G532100 chr6B 86.364 242 23 6 495 728 443214051 443214290 4.670000e-64 255.0
31 TraesCS7D01G532100 chr6B 78.592 341 54 17 3304 3635 471171938 471172268 1.330000e-49 207.0
32 TraesCS7D01G532100 chr6A 83.432 507 69 11 2764 3265 9261533 9261037 1.190000e-124 457.0
33 TraesCS7D01G532100 chr6A 87.536 345 34 8 3306 3648 515409133 515408796 1.230000e-104 390.0
34 TraesCS7D01G532100 chr5A 83.135 504 75 7 2764 3265 670542805 670542310 5.550000e-123 451.0
35 TraesCS7D01G532100 chr5A 91.111 45 3 1 3261 3304 670540201 670540157 3.930000e-05 60.2
36 TraesCS7D01G532100 chr5B 76.478 761 153 15 1133 1877 586534337 586535087 1.230000e-104 390.0
37 TraesCS7D01G532100 chr5B 86.026 229 16 8 495 715 197897150 197896930 7.880000e-57 231.0
38 TraesCS7D01G532100 chr1B 79.920 498 85 6 1133 1615 645896364 645895867 5.800000e-93 351.0
39 TraesCS7D01G532100 chr1B 77.419 496 97 7 1135 1615 645913088 645912593 7.710000e-72 281.0
40 TraesCS7D01G532100 chr1B 76.860 484 97 11 1142 1615 645904289 645903811 3.610000e-65 259.0
41 TraesCS7D01G532100 chr1B 88.587 184 12 5 495 670 365995776 365995958 7.930000e-52 215.0
42 TraesCS7D01G532100 chr1D 77.075 506 95 11 1128 1615 467848598 467849100 4.640000e-69 272.0
43 TraesCS7D01G532100 chr1D 85.000 60 9 0 3587 3646 62160951 62161010 1.090000e-05 62.1
44 TraesCS7D01G532100 chr1A 77.030 505 97 10 1128 1615 560837551 560838053 4.640000e-69 272.0
45 TraesCS7D01G532100 chr1A 74.878 617 135 11 2000 2609 560880237 560879634 2.790000e-66 263.0
46 TraesCS7D01G532100 chr1A 85.408 233 23 7 490 714 203241958 203241729 7.880000e-57 231.0
47 TraesCS7D01G532100 chr2A 84.800 250 30 8 486 730 39885822 39885576 1.010000e-60 244.0
48 TraesCS7D01G532100 chr2A 100.000 30 0 0 144 173 4137576 4137605 5.090000e-04 56.5
49 TraesCS7D01G532100 chr3D 73.128 681 166 10 1142 1815 41050659 41051329 1.020000e-55 228.0
50 TraesCS7D01G532100 chr2B 84.914 232 16 9 495 715 160978319 160978542 2.210000e-52 217.0
51 TraesCS7D01G532100 chr6D 77.904 353 60 17 3303 3648 456280473 456280814 1.720000e-48 204.0
52 TraesCS7D01G532100 chr5D 83.772 228 24 11 3304 3525 203076480 203076700 1.720000e-48 204.0
53 TraesCS7D01G532100 chr5D 83.051 118 20 0 1398 1515 478596778 478596895 1.390000e-19 108.0
54 TraesCS7D01G532100 chr3A 87.135 171 20 1 5 173 736387024 736386854 3.720000e-45 193.0
55 TraesCS7D01G532100 chr3A 83.432 169 21 4 5 171 327825221 327825058 2.270000e-32 150.0
56 TraesCS7D01G532100 chr3A 89.623 106 8 3 621 724 18153795 18153899 8.220000e-27 132.0
57 TraesCS7D01G532100 chr3A 97.222 36 1 0 142 177 6649944 6649979 1.090000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G532100 chr7D 626144775 626148422 3647 True 6737.0 6737 100.000 1 3648 1 chr7D.!!$R2 3647
1 TraesCS7D01G532100 chr7A 722302527 722304439 1912 False 2798.0 2798 93.056 965 2891 1 chr7A.!!$F3 1926
2 TraesCS7D01G532100 chr7A 408685084 408687741 2657 False 258.6 457 87.222 2764 3304 2 chr7A.!!$F4 540
3 TraesCS7D01G532100 chr7A 693379980 693382628 2648 False 255.6 451 87.123 2764 3304 2 chr7A.!!$F5 540
4 TraesCS7D01G532100 chr7B 725980491 725984629 4138 True 860.4 1635 93.567 1 3156 5 chr7B.!!$R2 3155
5 TraesCS7D01G532100 chr4B 253655347 253655868 521 False 597.0 597 87.199 2764 3301 1 chr4B.!!$F1 537
6 TraesCS7D01G532100 chr4B 559766191 559766719 528 True 590.0 590 86.765 2764 3304 1 chr4B.!!$R1 540
7 TraesCS7D01G532100 chr5A 670540157 670542805 2648 True 255.6 451 87.123 2764 3304 2 chr5A.!!$R1 540
8 TraesCS7D01G532100 chr5B 586534337 586535087 750 False 390.0 390 76.478 1133 1877 1 chr5B.!!$F1 744
9 TraesCS7D01G532100 chr1D 467848598 467849100 502 False 272.0 272 77.075 1128 1615 1 chr1D.!!$F2 487
10 TraesCS7D01G532100 chr1A 560837551 560838053 502 False 272.0 272 77.030 1128 1615 1 chr1A.!!$F1 487
11 TraesCS7D01G532100 chr1A 560879634 560880237 603 True 263.0 263 74.878 2000 2609 1 chr1A.!!$R2 609
12 TraesCS7D01G532100 chr3D 41050659 41051329 670 False 228.0 228 73.128 1142 1815 1 chr3D.!!$F1 673

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
133 134 0.104934 ACCCTCTCTCCAACCACTGT 60.105 55.0 0.0 0.0 0.0 3.55 F
793 814 0.107654 AGCAAGTCGGGGCACTATTC 60.108 55.0 0.0 0.0 0.0 1.75 F
802 823 0.110678 GGGCACTATTCCCCTTAGCC 59.889 60.0 0.0 0.0 38.3 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1389 1620 0.240145 CGTAGGGCGCGAAGATCATA 59.760 55.000 12.10 0.0 0.00 2.15 R
2070 2341 1.303317 ACCATCGCTGTTGGGTTCC 60.303 57.895 9.44 0.0 38.64 3.62 R
2709 2991 3.503748 AGGCTCAAGCAGTAAAACATCAC 59.496 43.478 4.13 0.0 44.36 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 5.869753 AACATCATGTGTGCTCTAACTTC 57.130 39.130 0.00 0.00 41.14 3.01
112 113 2.825836 CGGAAGCCCTCCATGCAC 60.826 66.667 0.00 0.00 45.74 4.57
113 114 2.440980 GGAAGCCCTCCATGCACC 60.441 66.667 0.00 0.00 44.67 5.01
114 115 2.356278 GAAGCCCTCCATGCACCA 59.644 61.111 0.00 0.00 0.00 4.17
115 116 2.036256 AAGCCCTCCATGCACCAC 59.964 61.111 0.00 0.00 0.00 4.16
116 117 3.590466 AAGCCCTCCATGCACCACC 62.590 63.158 0.00 0.00 0.00 4.61
118 119 3.341629 CCCTCCATGCACCACCCT 61.342 66.667 0.00 0.00 0.00 4.34
119 120 2.273449 CCTCCATGCACCACCCTC 59.727 66.667 0.00 0.00 0.00 4.30
120 121 2.304056 CCTCCATGCACCACCCTCT 61.304 63.158 0.00 0.00 0.00 3.69
121 122 1.222936 CTCCATGCACCACCCTCTC 59.777 63.158 0.00 0.00 0.00 3.20
122 123 1.229625 TCCATGCACCACCCTCTCT 60.230 57.895 0.00 0.00 0.00 3.10
123 124 1.222936 CCATGCACCACCCTCTCTC 59.777 63.158 0.00 0.00 0.00 3.20
124 125 1.222936 CATGCACCACCCTCTCTCC 59.777 63.158 0.00 0.00 0.00 3.71
125 126 1.229625 ATGCACCACCCTCTCTCCA 60.230 57.895 0.00 0.00 0.00 3.86
126 127 0.842030 ATGCACCACCCTCTCTCCAA 60.842 55.000 0.00 0.00 0.00 3.53
133 134 0.104934 ACCCTCTCTCCAACCACTGT 60.105 55.000 0.00 0.00 0.00 3.55
191 192 6.550108 TCCTAGTCTATTCATTAACGGCTCTT 59.450 38.462 0.00 0.00 0.00 2.85
198 199 5.607119 TTCATTAACGGCTCTTGAAAGAC 57.393 39.130 0.00 0.00 0.00 3.01
245 246 8.428063 AGAGAGAAAGATGGAAATTCGACATAT 58.572 33.333 0.00 0.00 0.00 1.78
246 247 8.600449 AGAGAAAGATGGAAATTCGACATATC 57.400 34.615 0.00 0.00 0.00 1.63
298 299 6.308766 GTGCATGACCAAGAAATTACATGTTC 59.691 38.462 2.30 0.00 37.83 3.18
304 305 5.009610 ACCAAGAAATTACATGTTCGCACTT 59.990 36.000 2.30 2.70 0.00 3.16
310 311 4.955925 TTACATGTTCGCACTTAATGGG 57.044 40.909 2.30 0.00 42.62 4.00
324 325 8.348285 GCACTTAATGGGCAGGAATATATTTA 57.652 34.615 0.00 0.00 46.29 1.40
395 396 6.653526 TGCTTCCCATTAATTATGTGGATG 57.346 37.500 15.48 10.59 35.13 3.51
435 436 0.733150 CTCGATCACGACAGCTACCA 59.267 55.000 0.00 0.00 43.81 3.25
436 437 0.733150 TCGATCACGACAGCTACCAG 59.267 55.000 0.00 0.00 43.81 4.00
437 438 0.867753 CGATCACGACAGCTACCAGC 60.868 60.000 0.00 0.00 41.08 4.85
466 467 2.868020 GCACGATGATGCATGCAAG 58.132 52.632 26.68 15.52 45.39 4.01
467 468 0.594028 GCACGATGATGCATGCAAGG 60.594 55.000 26.68 14.08 45.39 3.61
483 484 1.978455 AAGGCAGTGTTCGGTCCACA 61.978 55.000 0.00 0.00 35.24 4.17
497 498 2.939103 GGTCCACATCACATGCTTAGAC 59.061 50.000 0.00 0.00 0.00 2.59
498 499 3.369892 GGTCCACATCACATGCTTAGACT 60.370 47.826 0.00 0.00 0.00 3.24
499 500 4.141937 GGTCCACATCACATGCTTAGACTA 60.142 45.833 0.00 0.00 0.00 2.59
500 501 4.806247 GTCCACATCACATGCTTAGACTAC 59.194 45.833 0.00 0.00 0.00 2.73
501 502 4.122776 CCACATCACATGCTTAGACTACC 58.877 47.826 0.00 0.00 0.00 3.18
502 503 4.141846 CCACATCACATGCTTAGACTACCT 60.142 45.833 0.00 0.00 0.00 3.08
503 504 5.069119 CCACATCACATGCTTAGACTACCTA 59.931 44.000 0.00 0.00 0.00 3.08
504 505 6.239430 CCACATCACATGCTTAGACTACCTAT 60.239 42.308 0.00 0.00 0.00 2.57
505 506 7.039714 CCACATCACATGCTTAGACTACCTATA 60.040 40.741 0.00 0.00 0.00 1.31
506 507 8.026026 CACATCACATGCTTAGACTACCTATAG 58.974 40.741 0.00 0.00 34.25 1.31
507 508 7.726291 ACATCACATGCTTAGACTACCTATAGT 59.274 37.037 0.00 0.00 44.74 2.12
508 509 7.511959 TCACATGCTTAGACTACCTATAGTG 57.488 40.000 0.00 0.00 41.98 2.74
509 510 6.490381 TCACATGCTTAGACTACCTATAGTGG 59.510 42.308 0.00 0.00 41.98 4.00
510 511 5.775701 ACATGCTTAGACTACCTATAGTGGG 59.224 44.000 0.00 0.00 41.98 4.61
511 512 5.658198 TGCTTAGACTACCTATAGTGGGA 57.342 43.478 0.00 0.00 41.98 4.37
512 513 5.632118 TGCTTAGACTACCTATAGTGGGAG 58.368 45.833 0.00 0.00 41.98 4.30
565 566 9.981114 TCTAGATAAAATAGATGATGCGACAAA 57.019 29.630 0.00 0.00 0.00 2.83
577 578 9.888878 AGATGATGCGACAAATAATAAATGAAG 57.111 29.630 0.00 0.00 0.00 3.02
578 579 9.882996 GATGATGCGACAAATAATAAATGAAGA 57.117 29.630 0.00 0.00 0.00 2.87
583 584 9.773328 TGCGACAAATAATAAATGAAGAAAGAG 57.227 29.630 0.00 0.00 0.00 2.85
584 585 9.988350 GCGACAAATAATAAATGAAGAAAGAGA 57.012 29.630 0.00 0.00 0.00 3.10
617 618 8.839310 AGTAATATATCAAGGCAAGATGTGTC 57.161 34.615 2.43 0.00 0.00 3.67
619 620 9.929180 GTAATATATCAAGGCAAGATGTGTCTA 57.071 33.333 2.43 0.00 43.11 2.59
623 624 4.697514 TCAAGGCAAGATGTGTCTATAGC 58.302 43.478 0.00 0.00 43.11 2.97
624 625 3.760580 AGGCAAGATGTGTCTATAGCC 57.239 47.619 0.00 0.00 41.69 3.93
625 626 3.312890 AGGCAAGATGTGTCTATAGCCT 58.687 45.455 11.05 11.05 41.69 4.58
626 627 4.483950 AGGCAAGATGTGTCTATAGCCTA 58.516 43.478 13.74 0.00 46.63 3.93
627 628 4.901849 AGGCAAGATGTGTCTATAGCCTAA 59.098 41.667 13.74 0.00 46.63 2.69
628 629 5.545723 AGGCAAGATGTGTCTATAGCCTAAT 59.454 40.000 13.74 0.00 46.63 1.73
629 630 6.726299 AGGCAAGATGTGTCTATAGCCTAATA 59.274 38.462 13.74 0.00 46.63 0.98
630 631 7.235606 AGGCAAGATGTGTCTATAGCCTAATAA 59.764 37.037 13.74 0.00 46.63 1.40
631 632 7.878127 GGCAAGATGTGTCTATAGCCTAATAAA 59.122 37.037 0.00 0.00 40.78 1.40
632 633 9.442047 GCAAGATGTGTCTATAGCCTAATAAAT 57.558 33.333 0.00 0.00 33.30 1.40
638 639 9.764363 TGTGTCTATAGCCTAATAAATGAAGTG 57.236 33.333 0.00 0.00 0.00 3.16
639 640 9.765795 GTGTCTATAGCCTAATAAATGAAGTGT 57.234 33.333 0.00 0.00 0.00 3.55
642 643 9.273016 TCTATAGCCTAATAAATGAAGTGTTGC 57.727 33.333 0.00 0.00 0.00 4.17
643 644 7.880160 ATAGCCTAATAAATGAAGTGTTGCA 57.120 32.000 0.00 0.00 0.00 4.08
644 645 6.780457 AGCCTAATAAATGAAGTGTTGCAT 57.220 33.333 0.00 0.00 0.00 3.96
645 646 6.567050 AGCCTAATAAATGAAGTGTTGCATG 58.433 36.000 0.00 0.00 0.00 4.06
646 647 6.153340 AGCCTAATAAATGAAGTGTTGCATGT 59.847 34.615 0.00 0.00 0.00 3.21
647 648 6.813152 GCCTAATAAATGAAGTGTTGCATGTT 59.187 34.615 0.00 0.00 0.00 2.71
648 649 7.973388 GCCTAATAAATGAAGTGTTGCATGTTA 59.027 33.333 0.00 0.00 0.00 2.41
649 650 9.289303 CCTAATAAATGAAGTGTTGCATGTTAC 57.711 33.333 0.00 0.00 0.00 2.50
650 651 9.289303 CTAATAAATGAAGTGTTGCATGTTACC 57.711 33.333 0.00 0.00 0.00 2.85
651 652 5.528043 AAATGAAGTGTTGCATGTTACCA 57.472 34.783 0.00 0.00 0.00 3.25
652 653 3.980646 TGAAGTGTTGCATGTTACCAC 57.019 42.857 0.00 0.00 0.00 4.16
653 654 3.282885 TGAAGTGTTGCATGTTACCACA 58.717 40.909 0.00 0.00 37.31 4.17
654 655 3.888323 TGAAGTGTTGCATGTTACCACAT 59.112 39.130 0.00 0.00 45.18 3.21
655 656 5.066593 TGAAGTGTTGCATGTTACCACATA 58.933 37.500 0.00 0.00 42.14 2.29
656 657 5.709631 TGAAGTGTTGCATGTTACCACATAT 59.290 36.000 0.00 0.00 42.14 1.78
657 658 6.881602 TGAAGTGTTGCATGTTACCACATATA 59.118 34.615 0.00 0.00 42.14 0.86
658 659 7.555914 TGAAGTGTTGCATGTTACCACATATAT 59.444 33.333 0.00 0.00 42.14 0.86
659 660 7.263100 AGTGTTGCATGTTACCACATATATG 57.737 36.000 11.29 11.29 42.14 1.78
660 661 6.828273 AGTGTTGCATGTTACCACATATATGT 59.172 34.615 12.75 12.75 42.14 2.29
661 662 7.339212 AGTGTTGCATGTTACCACATATATGTT 59.661 33.333 15.85 5.50 42.14 2.71
662 663 8.616942 GTGTTGCATGTTACCACATATATGTTA 58.383 33.333 15.85 4.50 42.14 2.41
663 664 8.616942 TGTTGCATGTTACCACATATATGTTAC 58.383 33.333 15.85 11.59 42.14 2.50
664 665 8.836413 GTTGCATGTTACCACATATATGTTACT 58.164 33.333 15.85 4.09 42.14 2.24
665 666 8.972458 TGCATGTTACCACATATATGTTACTT 57.028 30.769 15.85 7.44 42.14 2.24
666 667 9.051679 TGCATGTTACCACATATATGTTACTTC 57.948 33.333 15.85 7.66 42.14 3.01
667 668 8.504005 GCATGTTACCACATATATGTTACTTCC 58.496 37.037 15.85 3.90 42.14 3.46
668 669 8.999431 CATGTTACCACATATATGTTACTTCCC 58.001 37.037 15.85 2.44 42.14 3.97
669 670 8.091952 TGTTACCACATATATGTTACTTCCCA 57.908 34.615 15.85 4.81 39.39 4.37
670 671 7.988599 TGTTACCACATATATGTTACTTCCCAC 59.011 37.037 15.85 5.91 39.39 4.61
671 672 6.824958 ACCACATATATGTTACTTCCCACT 57.175 37.500 15.85 0.00 39.39 4.00
672 673 7.924358 ACCACATATATGTTACTTCCCACTA 57.076 36.000 15.85 0.00 39.39 2.74
673 674 8.506196 ACCACATATATGTTACTTCCCACTAT 57.494 34.615 15.85 0.00 39.39 2.12
674 675 9.610104 ACCACATATATGTTACTTCCCACTATA 57.390 33.333 15.85 0.00 39.39 1.31
704 705 7.262772 TGGTAACATAGACTACTAACATGTGC 58.737 38.462 0.00 0.00 46.17 4.57
705 706 7.093684 TGGTAACATAGACTACTAACATGTGCA 60.094 37.037 0.00 0.00 46.17 4.57
706 707 7.926555 GGTAACATAGACTACTAACATGTGCAT 59.073 37.037 0.00 0.00 32.04 3.96
707 708 7.776933 AACATAGACTACTAACATGTGCATG 57.223 36.000 10.31 10.31 44.15 4.06
774 795 2.235016 GGTGTGGAAATTAGTGGTGCA 58.765 47.619 0.00 0.00 0.00 4.57
778 799 2.295909 GTGGAAATTAGTGGTGCAGCAA 59.704 45.455 22.04 5.57 0.00 3.91
781 802 3.366374 GGAAATTAGTGGTGCAGCAAGTC 60.366 47.826 22.04 8.63 0.00 3.01
782 803 1.442769 ATTAGTGGTGCAGCAAGTCG 58.557 50.000 22.04 0.00 0.00 4.18
792 813 0.392998 CAGCAAGTCGGGGCACTATT 60.393 55.000 0.00 0.00 0.00 1.73
793 814 0.107654 AGCAAGTCGGGGCACTATTC 60.108 55.000 0.00 0.00 0.00 1.75
794 815 1.095807 GCAAGTCGGGGCACTATTCC 61.096 60.000 0.00 0.00 0.00 3.01
802 823 0.110678 GGGCACTATTCCCCTTAGCC 59.889 60.000 0.00 0.00 38.30 3.93
806 827 0.693092 ACTATTCCCCTTAGCCGCCA 60.693 55.000 0.00 0.00 0.00 5.69
836 858 3.328637 GGTGGTGGGGAATATTATACGGT 59.671 47.826 0.00 0.00 0.00 4.83
838 860 5.012975 GGTGGTGGGGAATATTATACGGTTA 59.987 44.000 0.00 0.00 0.00 2.85
886 934 7.209475 CCTTCTTCAACTTTATTTTGGCAGAA 58.791 34.615 0.00 0.00 0.00 3.02
907 955 7.500559 GCAGAACAGGGTTGAGATATTTTCTAT 59.499 37.037 0.00 0.00 33.74 1.98
908 956 8.834465 CAGAACAGGGTTGAGATATTTTCTATG 58.166 37.037 0.00 0.00 33.74 2.23
912 960 8.497745 ACAGGGTTGAGATATTTTCTATGATGT 58.502 33.333 0.00 0.00 33.74 3.06
1015 1234 2.740714 GGCATGCGACGTCCTTCAC 61.741 63.158 12.44 0.00 0.00 3.18
1042 1261 1.149101 ACAAATGGAGGACACCACCT 58.851 50.000 5.92 0.00 43.03 4.00
1085 1307 2.752238 CTGGGCTCTCGTCCTCGT 60.752 66.667 0.00 0.00 35.36 4.18
1118 1340 4.142730 GCTTGCACTTACATGGAGAAAGAG 60.143 45.833 0.00 0.00 0.00 2.85
1635 1876 3.672295 CTCCAAGCAGCGGGACCTC 62.672 68.421 4.84 0.00 0.00 3.85
1695 1936 1.216178 GCTTAACACGGCGGACCTA 59.784 57.895 13.24 0.00 0.00 3.08
1983 2254 7.290248 TGTCTTCTAACCCCTCCTTATCAATAG 59.710 40.741 0.00 0.00 0.00 1.73
2013 2284 3.084579 CGCGCAGGACATCTTCAC 58.915 61.111 8.75 0.00 0.00 3.18
2017 2288 1.078848 GCAGGACATCTTCACCGCT 60.079 57.895 0.00 0.00 0.00 5.52
2032 2303 3.444805 GCTGGGAGCGAGACGTCT 61.445 66.667 20.18 20.18 0.00 4.18
2371 2645 4.856607 CCGGAGCGCTTCGAGTCC 62.857 72.222 38.72 20.03 0.00 3.85
2564 2845 3.059884 GAGTTCGACATGACAGAGCAAA 58.940 45.455 0.00 0.00 0.00 3.68
2641 2922 1.770110 ACTGCCAACCTCTCCACCA 60.770 57.895 0.00 0.00 0.00 4.17
2643 2924 2.055689 CTGCCAACCTCTCCACCACA 62.056 60.000 0.00 0.00 0.00 4.17
2652 2933 2.418746 CCTCTCCACCACATTAAGACCG 60.419 54.545 0.00 0.00 0.00 4.79
2659 2940 3.432252 CACCACATTAAGACCGTTCTGAC 59.568 47.826 0.00 0.00 29.98 3.51
2662 2943 4.307432 CACATTAAGACCGTTCTGACTGT 58.693 43.478 0.00 0.00 29.98 3.55
2663 2944 5.466819 CACATTAAGACCGTTCTGACTGTA 58.533 41.667 0.00 0.00 29.98 2.74
2664 2945 5.345202 CACATTAAGACCGTTCTGACTGTAC 59.655 44.000 0.00 0.00 29.98 2.90
2665 2946 5.010314 ACATTAAGACCGTTCTGACTGTACA 59.990 40.000 0.00 0.00 29.98 2.90
2695 2977 6.727231 TGTACTAAGGGTTGAAGGAATAGTGA 59.273 38.462 0.00 0.00 0.00 3.41
2709 2991 6.648192 AGGAATAGTGAGAGATTGGTGAAAG 58.352 40.000 0.00 0.00 0.00 2.62
2911 4216 2.233431 TGTGGCCATCAAAATGCTTACC 59.767 45.455 9.72 0.00 0.00 2.85
2920 4225 8.306038 GCCATCAAAATGCTTACCATATTGATA 58.694 33.333 0.00 0.00 32.67 2.15
3001 4307 2.631160 TGTCGGACAACAAGGTTCAT 57.369 45.000 8.68 0.00 0.00 2.57
3124 4430 4.896482 AGTATGTTCTATTCCTTCGAGCCT 59.104 41.667 0.00 0.00 0.00 4.58
3166 4472 4.886579 AGCATTGGTGACCTTTTTCATTC 58.113 39.130 2.11 0.00 0.00 2.67
3167 4473 4.590222 AGCATTGGTGACCTTTTTCATTCT 59.410 37.500 2.11 0.00 0.00 2.40
3179 4485 8.255111 ACCTTTTTCATTCTTTCTTTCTCCAT 57.745 30.769 0.00 0.00 0.00 3.41
3304 6734 7.645058 TCTTTTGAGAAGAAACTTGTCCATT 57.355 32.000 0.00 0.00 0.00 3.16
3305 6735 8.066612 TCTTTTGAGAAGAAACTTGTCCATTT 57.933 30.769 0.00 0.00 0.00 2.32
3306 6736 8.531146 TCTTTTGAGAAGAAACTTGTCCATTTT 58.469 29.630 0.00 0.00 0.00 1.82
3307 6737 9.154847 CTTTTGAGAAGAAACTTGTCCATTTTT 57.845 29.630 0.00 0.00 0.00 1.94
3333 6763 9.849166 TTTCGATAAAGGGTGATTTTTATTGAC 57.151 29.630 6.46 0.00 38.47 3.18
3334 6764 8.801882 TCGATAAAGGGTGATTTTTATTGACT 57.198 30.769 3.83 0.00 35.91 3.41
3335 6765 8.889717 TCGATAAAGGGTGATTTTTATTGACTC 58.110 33.333 3.83 0.00 35.91 3.36
3336 6766 8.673711 CGATAAAGGGTGATTTTTATTGACTCA 58.326 33.333 0.00 0.00 34.63 3.41
3351 6781 9.764363 TTTATTGACTCATAATAAGCATCGAGT 57.236 29.630 0.00 0.00 36.47 4.18
3352 6782 7.649370 ATTGACTCATAATAAGCATCGAGTG 57.351 36.000 0.00 0.00 34.02 3.51
3353 6783 6.391227 TGACTCATAATAAGCATCGAGTGA 57.609 37.500 0.00 0.00 34.02 3.41
3354 6784 6.986250 TGACTCATAATAAGCATCGAGTGAT 58.014 36.000 0.00 0.00 34.02 3.06
3355 6785 8.110860 TGACTCATAATAAGCATCGAGTGATA 57.889 34.615 0.00 0.00 34.02 2.15
3356 6786 8.023706 TGACTCATAATAAGCATCGAGTGATAC 58.976 37.037 0.00 0.00 34.02 2.24
3357 6787 7.886338 ACTCATAATAAGCATCGAGTGATACA 58.114 34.615 0.00 0.00 32.70 2.29
3358 6788 8.360390 ACTCATAATAAGCATCGAGTGATACAA 58.640 33.333 0.00 0.00 32.70 2.41
3359 6789 9.363763 CTCATAATAAGCATCGAGTGATACAAT 57.636 33.333 0.00 0.00 32.18 2.71
3360 6790 9.710900 TCATAATAAGCATCGAGTGATACAATT 57.289 29.630 0.00 0.00 32.18 2.32
3363 6793 8.887036 AATAAGCATCGAGTGATACAATTACA 57.113 30.769 0.00 0.00 32.18 2.41
3364 6794 8.887036 ATAAGCATCGAGTGATACAATTACAA 57.113 30.769 0.00 0.00 32.18 2.41
3365 6795 7.792374 AAGCATCGAGTGATACAATTACAAT 57.208 32.000 0.00 0.00 32.18 2.71
3366 6796 7.182361 AGCATCGAGTGATACAATTACAATG 57.818 36.000 0.00 0.00 32.18 2.82
3367 6797 6.986231 AGCATCGAGTGATACAATTACAATGA 59.014 34.615 0.00 0.00 32.18 2.57
3368 6798 7.170489 AGCATCGAGTGATACAATTACAATGAG 59.830 37.037 0.00 0.00 32.18 2.90
3369 6799 6.828502 TCGAGTGATACAATTACAATGAGC 57.171 37.500 0.00 0.00 0.00 4.26
3370 6800 5.458779 TCGAGTGATACAATTACAATGAGCG 59.541 40.000 0.00 0.00 0.00 5.03
3371 6801 5.458779 CGAGTGATACAATTACAATGAGCGA 59.541 40.000 0.00 0.00 0.00 4.93
3372 6802 6.560433 CGAGTGATACAATTACAATGAGCGAC 60.560 42.308 0.00 0.00 0.00 5.19
3373 6803 6.106003 AGTGATACAATTACAATGAGCGACA 58.894 36.000 0.00 0.00 0.00 4.35
3374 6804 6.036083 AGTGATACAATTACAATGAGCGACAC 59.964 38.462 0.00 0.00 0.00 3.67
3375 6805 5.293324 TGATACAATTACAATGAGCGACACC 59.707 40.000 0.00 0.00 0.00 4.16
3376 6806 2.747446 ACAATTACAATGAGCGACACCC 59.253 45.455 0.00 0.00 0.00 4.61
3377 6807 1.651987 ATTACAATGAGCGACACCCG 58.348 50.000 0.00 0.00 42.21 5.28
3378 6808 0.390603 TTACAATGAGCGACACCCGG 60.391 55.000 0.00 0.00 39.04 5.73
3379 6809 2.845752 TACAATGAGCGACACCCGGC 62.846 60.000 0.00 0.00 39.04 6.13
3380 6810 4.778143 AATGAGCGACACCCGGCC 62.778 66.667 0.00 0.00 39.04 6.13
3387 6817 4.101448 GACACCCGGCCTCTGCAT 62.101 66.667 0.00 0.00 40.13 3.96
3388 6818 2.687200 ACACCCGGCCTCTGCATA 60.687 61.111 0.00 0.00 40.13 3.14
3389 6819 2.109799 CACCCGGCCTCTGCATAG 59.890 66.667 0.00 0.00 40.13 2.23
3390 6820 3.866582 ACCCGGCCTCTGCATAGC 61.867 66.667 0.00 0.00 40.13 2.97
3391 6821 3.554342 CCCGGCCTCTGCATAGCT 61.554 66.667 0.00 0.00 40.13 3.32
3392 6822 2.210013 CCCGGCCTCTGCATAGCTA 61.210 63.158 0.00 0.00 40.13 3.32
3393 6823 1.291588 CCGGCCTCTGCATAGCTAG 59.708 63.158 0.00 0.00 40.13 3.42
3394 6824 1.291588 CGGCCTCTGCATAGCTAGG 59.708 63.158 0.00 0.00 40.13 3.02
3395 6825 1.181741 CGGCCTCTGCATAGCTAGGA 61.182 60.000 10.11 0.00 40.13 2.94
3396 6826 1.274712 GGCCTCTGCATAGCTAGGAT 58.725 55.000 10.11 0.00 40.13 3.24
3397 6827 1.066286 GGCCTCTGCATAGCTAGGATG 60.066 57.143 10.11 0.00 40.13 3.51
3405 6835 2.141517 CATAGCTAGGATGCACACAGC 58.858 52.381 0.00 0.00 45.96 4.40
3411 6841 4.950744 GATGCACACAGCCAACAC 57.049 55.556 0.00 0.00 44.83 3.32
3412 6842 2.032170 GATGCACACAGCCAACACA 58.968 52.632 0.00 0.00 44.83 3.72
3413 6843 0.385029 GATGCACACAGCCAACACAA 59.615 50.000 0.00 0.00 44.83 3.33
3414 6844 0.386476 ATGCACACAGCCAACACAAG 59.614 50.000 0.00 0.00 44.83 3.16
3415 6845 1.589727 GCACACAGCCAACACAAGC 60.590 57.895 0.00 0.00 37.23 4.01
3416 6846 1.808546 CACACAGCCAACACAAGCA 59.191 52.632 0.00 0.00 0.00 3.91
3417 6847 0.526096 CACACAGCCAACACAAGCAC 60.526 55.000 0.00 0.00 0.00 4.40
3418 6848 0.964860 ACACAGCCAACACAAGCACA 60.965 50.000 0.00 0.00 0.00 4.57
3419 6849 0.526096 CACAGCCAACACAAGCACAC 60.526 55.000 0.00 0.00 0.00 3.82
3420 6850 1.298563 CAGCCAACACAAGCACACG 60.299 57.895 0.00 0.00 0.00 4.49
3421 6851 2.655044 GCCAACACAAGCACACGC 60.655 61.111 0.00 0.00 38.99 5.34
3422 6852 2.797330 CCAACACAAGCACACGCA 59.203 55.556 0.00 0.00 42.27 5.24
3423 6853 1.586042 CCAACACAAGCACACGCAC 60.586 57.895 0.00 0.00 42.27 5.34
3424 6854 1.136356 CAACACAAGCACACGCACA 59.864 52.632 0.00 0.00 42.27 4.57
3425 6855 1.133363 CAACACAAGCACACGCACAC 61.133 55.000 0.00 0.00 42.27 3.82
3426 6856 1.581727 AACACAAGCACACGCACACA 61.582 50.000 0.00 0.00 42.27 3.72
3427 6857 1.136356 CACAAGCACACGCACACAA 59.864 52.632 0.00 0.00 42.27 3.33
3428 6858 0.455802 CACAAGCACACGCACACAAA 60.456 50.000 0.00 0.00 42.27 2.83
3429 6859 0.179166 ACAAGCACACGCACACAAAG 60.179 50.000 0.00 0.00 42.27 2.77
3430 6860 0.098552 CAAGCACACGCACACAAAGA 59.901 50.000 0.00 0.00 42.27 2.52
3431 6861 1.024271 AAGCACACGCACACAAAGAT 58.976 45.000 0.00 0.00 42.27 2.40
3432 6862 0.588252 AGCACACGCACACAAAGATC 59.412 50.000 0.00 0.00 42.27 2.75
3433 6863 0.588252 GCACACGCACACAAAGATCT 59.412 50.000 0.00 0.00 38.36 2.75
3434 6864 1.398960 GCACACGCACACAAAGATCTC 60.399 52.381 0.00 0.00 38.36 2.75
3435 6865 1.136529 CACACGCACACAAAGATCTCG 60.137 52.381 0.00 0.00 0.00 4.04
3436 6866 0.179240 CACGCACACAAAGATCTCGC 60.179 55.000 0.00 0.00 0.00 5.03
3437 6867 1.291877 ACGCACACAAAGATCTCGCC 61.292 55.000 0.00 0.00 0.00 5.54
3438 6868 1.421485 GCACACAAAGATCTCGCCG 59.579 57.895 0.00 0.00 0.00 6.46
3439 6869 1.970917 GCACACAAAGATCTCGCCGG 61.971 60.000 0.00 0.00 0.00 6.13
3440 6870 1.741770 ACACAAAGATCTCGCCGGC 60.742 57.895 19.07 19.07 0.00 6.13
3441 6871 1.741401 CACAAAGATCTCGCCGGCA 60.741 57.895 28.98 12.94 0.00 5.69
3442 6872 1.003839 ACAAAGATCTCGCCGGCAA 60.004 52.632 28.98 7.25 0.00 4.52
3443 6873 1.021390 ACAAAGATCTCGCCGGCAAG 61.021 55.000 28.98 19.72 0.00 4.01
3444 6874 1.450312 AAAGATCTCGCCGGCAAGG 60.450 57.895 28.98 15.47 44.97 3.61
3445 6875 1.899437 AAAGATCTCGCCGGCAAGGA 61.899 55.000 28.98 20.41 45.00 3.36
3446 6876 2.279784 GATCTCGCCGGCAAGGAG 60.280 66.667 28.98 23.94 45.00 3.69
3447 6877 4.537433 ATCTCGCCGGCAAGGAGC 62.537 66.667 28.98 0.00 45.00 4.70
3449 6879 3.838271 CTCGCCGGCAAGGAGCTA 61.838 66.667 28.98 0.00 45.00 3.32
3450 6880 3.371097 CTCGCCGGCAAGGAGCTAA 62.371 63.158 28.98 0.00 45.00 3.09
3451 6881 2.435938 CGCCGGCAAGGAGCTAAA 60.436 61.111 28.98 0.00 45.00 1.85
3452 6882 1.819632 CGCCGGCAAGGAGCTAAAT 60.820 57.895 28.98 0.00 45.00 1.40
3453 6883 1.776034 CGCCGGCAAGGAGCTAAATC 61.776 60.000 28.98 0.00 45.00 2.17
3454 6884 0.748005 GCCGGCAAGGAGCTAAATCA 60.748 55.000 24.80 0.00 45.00 2.57
3455 6885 1.972872 CCGGCAAGGAGCTAAATCAT 58.027 50.000 0.00 0.00 45.00 2.45
3456 6886 2.810400 GCCGGCAAGGAGCTAAATCATA 60.810 50.000 24.80 0.00 45.00 2.15
3457 6887 2.808543 CCGGCAAGGAGCTAAATCATAC 59.191 50.000 0.00 0.00 45.00 2.39
3458 6888 3.495100 CCGGCAAGGAGCTAAATCATACT 60.495 47.826 0.00 0.00 45.00 2.12
3459 6889 4.262463 CCGGCAAGGAGCTAAATCATACTA 60.262 45.833 0.00 0.00 45.00 1.82
3460 6890 4.926238 CGGCAAGGAGCTAAATCATACTAG 59.074 45.833 0.00 0.00 44.79 2.57
3461 6891 5.279006 CGGCAAGGAGCTAAATCATACTAGA 60.279 44.000 0.00 0.00 44.79 2.43
3462 6892 5.929415 GGCAAGGAGCTAAATCATACTAGAC 59.071 44.000 0.00 0.00 44.79 2.59
3463 6893 5.929415 GCAAGGAGCTAAATCATACTAGACC 59.071 44.000 0.00 0.00 41.15 3.85
3464 6894 6.463049 GCAAGGAGCTAAATCATACTAGACCA 60.463 42.308 0.00 0.00 41.15 4.02
3465 6895 7.500992 CAAGGAGCTAAATCATACTAGACCAA 58.499 38.462 0.00 0.00 0.00 3.67
3466 6896 7.676683 AGGAGCTAAATCATACTAGACCAAA 57.323 36.000 0.00 0.00 0.00 3.28
3467 6897 7.731054 AGGAGCTAAATCATACTAGACCAAAG 58.269 38.462 0.00 0.00 0.00 2.77
3468 6898 6.425417 GGAGCTAAATCATACTAGACCAAAGC 59.575 42.308 0.00 0.00 0.00 3.51
3469 6899 7.130681 AGCTAAATCATACTAGACCAAAGCT 57.869 36.000 0.00 0.00 0.00 3.74
3470 6900 8.251383 AGCTAAATCATACTAGACCAAAGCTA 57.749 34.615 0.00 0.00 33.91 3.32
3471 6901 8.875168 AGCTAAATCATACTAGACCAAAGCTAT 58.125 33.333 0.00 0.00 33.91 2.97
3472 6902 8.930760 GCTAAATCATACTAGACCAAAGCTATG 58.069 37.037 0.00 0.00 0.00 2.23
3473 6903 7.736447 AAATCATACTAGACCAAAGCTATGC 57.264 36.000 0.00 0.00 0.00 3.14
3474 6904 5.215252 TCATACTAGACCAAAGCTATGCC 57.785 43.478 0.00 0.00 0.00 4.40
3475 6905 4.901849 TCATACTAGACCAAAGCTATGCCT 59.098 41.667 0.00 0.00 0.00 4.75
3476 6906 6.075315 TCATACTAGACCAAAGCTATGCCTA 58.925 40.000 0.00 0.00 0.00 3.93
3477 6907 4.946478 ACTAGACCAAAGCTATGCCTAG 57.054 45.455 0.00 0.00 32.78 3.02
3478 6908 3.643792 ACTAGACCAAAGCTATGCCTAGG 59.356 47.826 3.67 3.67 31.76 3.02
3479 6909 1.141858 AGACCAAAGCTATGCCTAGGC 59.858 52.381 27.71 27.71 42.35 3.93
3492 6922 2.637947 GCCTAGGCAGAGAGAAAAAGG 58.362 52.381 29.33 0.00 41.49 3.11
3493 6923 2.237392 GCCTAGGCAGAGAGAAAAAGGA 59.763 50.000 29.33 0.00 41.49 3.36
3494 6924 3.307762 GCCTAGGCAGAGAGAAAAAGGAA 60.308 47.826 29.33 0.00 41.49 3.36
3495 6925 4.807643 GCCTAGGCAGAGAGAAAAAGGAAA 60.808 45.833 29.33 0.00 41.49 3.13
3496 6926 5.316987 CCTAGGCAGAGAGAAAAAGGAAAA 58.683 41.667 0.00 0.00 0.00 2.29
3497 6927 5.770162 CCTAGGCAGAGAGAAAAAGGAAAAA 59.230 40.000 0.00 0.00 0.00 1.94
3516 6946 4.766404 AAAACAGTCCCAAAGCGATAAG 57.234 40.909 0.00 0.00 0.00 1.73
3517 6947 3.695830 AACAGTCCCAAAGCGATAAGA 57.304 42.857 0.00 0.00 0.00 2.10
3518 6948 3.695830 ACAGTCCCAAAGCGATAAGAA 57.304 42.857 0.00 0.00 0.00 2.52
3519 6949 3.335579 ACAGTCCCAAAGCGATAAGAAC 58.664 45.455 0.00 0.00 0.00 3.01
3520 6950 3.244422 ACAGTCCCAAAGCGATAAGAACA 60.244 43.478 0.00 0.00 0.00 3.18
3521 6951 3.372206 CAGTCCCAAAGCGATAAGAACAG 59.628 47.826 0.00 0.00 0.00 3.16
3522 6952 2.096013 GTCCCAAAGCGATAAGAACAGC 59.904 50.000 0.00 0.00 0.00 4.40
3523 6953 1.062587 CCCAAAGCGATAAGAACAGCG 59.937 52.381 0.00 0.00 34.34 5.18
3524 6954 1.999735 CCAAAGCGATAAGAACAGCGA 59.000 47.619 0.00 0.00 34.34 4.93
3525 6955 2.222819 CCAAAGCGATAAGAACAGCGAC 60.223 50.000 0.00 0.00 34.34 5.19
3526 6956 2.656560 AAGCGATAAGAACAGCGACT 57.343 45.000 0.00 0.00 34.34 4.18
3527 6957 3.777465 AAGCGATAAGAACAGCGACTA 57.223 42.857 0.00 0.00 34.34 2.59
3528 6958 3.341857 AGCGATAAGAACAGCGACTAG 57.658 47.619 0.00 0.00 34.34 2.57
3540 6970 3.918102 CGACTAGCATGTACAGCGA 57.082 52.632 0.33 1.13 37.01 4.93
3541 6971 1.467875 CGACTAGCATGTACAGCGAC 58.532 55.000 0.33 0.00 37.01 5.19
3542 6972 1.202143 CGACTAGCATGTACAGCGACA 60.202 52.381 0.33 0.00 37.01 4.35
3543 6973 2.731027 CGACTAGCATGTACAGCGACAA 60.731 50.000 0.33 0.00 37.01 3.18
3544 6974 2.599082 GACTAGCATGTACAGCGACAAC 59.401 50.000 0.33 0.00 37.01 3.32
3545 6975 1.927174 CTAGCATGTACAGCGACAACC 59.073 52.381 0.33 0.00 37.01 3.77
3546 6976 0.673644 AGCATGTACAGCGACAACCC 60.674 55.000 0.33 0.00 37.01 4.11
3547 6977 0.673644 GCATGTACAGCGACAACCCT 60.674 55.000 0.33 0.00 31.83 4.34
3548 6978 1.808411 CATGTACAGCGACAACCCTT 58.192 50.000 0.33 0.00 31.83 3.95
3549 6979 1.464608 CATGTACAGCGACAACCCTTG 59.535 52.381 0.33 0.00 31.83 3.61
3550 6980 0.250124 TGTACAGCGACAACCCTTGG 60.250 55.000 0.00 0.00 34.12 3.61
3551 6981 1.302192 TACAGCGACAACCCTTGGC 60.302 57.895 0.00 0.00 34.51 4.52
3552 6982 1.764571 TACAGCGACAACCCTTGGCT 61.765 55.000 0.00 0.00 36.19 4.75
3553 6983 1.898574 CAGCGACAACCCTTGGCTT 60.899 57.895 0.00 0.00 36.19 4.35
3554 6984 1.600916 AGCGACAACCCTTGGCTTC 60.601 57.895 0.00 0.00 36.19 3.86
3555 6985 1.896660 GCGACAACCCTTGGCTTCA 60.897 57.895 0.00 0.00 36.19 3.02
3556 6986 1.452145 GCGACAACCCTTGGCTTCAA 61.452 55.000 0.00 0.00 36.19 2.69
3557 6987 0.310854 CGACAACCCTTGGCTTCAAC 59.689 55.000 0.00 0.00 36.19 3.18
3558 6988 1.692411 GACAACCCTTGGCTTCAACT 58.308 50.000 0.00 0.00 35.19 3.16
3559 6989 2.808933 CGACAACCCTTGGCTTCAACTA 60.809 50.000 0.00 0.00 36.19 2.24
3560 6990 3.421844 GACAACCCTTGGCTTCAACTAT 58.578 45.455 0.00 0.00 35.19 2.12
3561 6991 3.157087 ACAACCCTTGGCTTCAACTATG 58.843 45.455 0.00 0.00 34.12 2.23
3562 6992 3.157087 CAACCCTTGGCTTCAACTATGT 58.843 45.455 0.00 0.00 0.00 2.29
3563 6993 3.073274 ACCCTTGGCTTCAACTATGTC 57.927 47.619 0.00 0.00 0.00 3.06
3564 6994 2.375174 ACCCTTGGCTTCAACTATGTCA 59.625 45.455 0.00 0.00 0.00 3.58
3565 6995 3.010584 ACCCTTGGCTTCAACTATGTCAT 59.989 43.478 0.00 0.00 0.00 3.06
3566 6996 3.379372 CCCTTGGCTTCAACTATGTCATG 59.621 47.826 0.00 0.00 0.00 3.07
3567 6997 4.264253 CCTTGGCTTCAACTATGTCATGA 58.736 43.478 0.00 0.00 0.00 3.07
3568 6998 4.095483 CCTTGGCTTCAACTATGTCATGAC 59.905 45.833 19.27 19.27 0.00 3.06
3569 6999 4.284829 TGGCTTCAACTATGTCATGACA 57.715 40.909 29.67 29.67 46.44 3.58
3570 7000 4.256110 TGGCTTCAACTATGTCATGACAG 58.744 43.478 30.63 21.25 45.48 3.51
3571 7001 3.064545 GGCTTCAACTATGTCATGACAGC 59.935 47.826 30.63 24.20 45.48 4.40
3572 7002 3.686241 GCTTCAACTATGTCATGACAGCA 59.314 43.478 30.63 20.45 45.48 4.41
3573 7003 4.334759 GCTTCAACTATGTCATGACAGCAT 59.665 41.667 30.63 18.38 45.48 3.79
3574 7004 5.525012 GCTTCAACTATGTCATGACAGCATA 59.475 40.000 30.63 18.51 45.48 3.14
3575 7005 6.510799 GCTTCAACTATGTCATGACAGCATAC 60.511 42.308 30.63 12.04 45.48 2.39
3576 7006 5.976458 TCAACTATGTCATGACAGCATACA 58.024 37.500 30.63 12.79 45.48 2.29
3577 7007 6.585416 TCAACTATGTCATGACAGCATACAT 58.415 36.000 30.63 16.33 45.48 2.29
3578 7008 7.725251 TCAACTATGTCATGACAGCATACATA 58.275 34.615 30.63 16.57 45.48 2.29
3579 7009 8.370182 TCAACTATGTCATGACAGCATACATAT 58.630 33.333 30.63 14.97 45.48 1.78
3580 7010 8.996271 CAACTATGTCATGACAGCATACATATT 58.004 33.333 30.63 14.30 45.48 1.28
3582 7012 9.645059 ACTATGTCATGACAGCATACATATTAC 57.355 33.333 30.63 0.00 45.48 1.89
3583 7013 7.586714 ATGTCATGACAGCATACATATTACG 57.413 36.000 30.63 0.00 45.48 3.18
3584 7014 6.744112 TGTCATGACAGCATACATATTACGA 58.256 36.000 24.56 0.00 36.21 3.43
3585 7015 6.863126 TGTCATGACAGCATACATATTACGAG 59.137 38.462 24.56 0.00 36.21 4.18
3586 7016 7.084486 GTCATGACAGCATACATATTACGAGA 58.916 38.462 21.07 0.00 32.27 4.04
3587 7017 7.272299 GTCATGACAGCATACATATTACGAGAG 59.728 40.741 21.07 0.00 32.27 3.20
3588 7018 6.877611 TGACAGCATACATATTACGAGAGA 57.122 37.500 0.00 0.00 0.00 3.10
3589 7019 6.903419 TGACAGCATACATATTACGAGAGAG 58.097 40.000 0.00 0.00 0.00 3.20
3590 7020 6.072452 TGACAGCATACATATTACGAGAGAGG 60.072 42.308 0.00 0.00 0.00 3.69
3591 7021 5.770663 ACAGCATACATATTACGAGAGAGGT 59.229 40.000 0.00 0.00 0.00 3.85
3592 7022 6.265649 ACAGCATACATATTACGAGAGAGGTT 59.734 38.462 0.00 0.00 0.00 3.50
3593 7023 6.804295 CAGCATACATATTACGAGAGAGGTTC 59.196 42.308 0.00 0.00 0.00 3.62
3594 7024 6.717540 AGCATACATATTACGAGAGAGGTTCT 59.282 38.462 0.00 0.00 39.43 3.01
3595 7025 7.231722 AGCATACATATTACGAGAGAGGTTCTT 59.768 37.037 0.00 0.00 35.87 2.52
3596 7026 7.539366 GCATACATATTACGAGAGAGGTTCTTC 59.461 40.741 0.00 0.00 35.87 2.87
3597 7027 8.568794 CATACATATTACGAGAGAGGTTCTTCA 58.431 37.037 0.00 0.00 35.87 3.02
3598 7028 7.406031 ACATATTACGAGAGAGGTTCTTCAA 57.594 36.000 0.00 0.00 35.87 2.69
3599 7029 7.837863 ACATATTACGAGAGAGGTTCTTCAAA 58.162 34.615 0.00 0.00 35.87 2.69
3600 7030 8.311836 ACATATTACGAGAGAGGTTCTTCAAAA 58.688 33.333 0.00 0.00 35.87 2.44
3601 7031 9.151471 CATATTACGAGAGAGGTTCTTCAAAAA 57.849 33.333 0.00 0.00 35.87 1.94
3602 7032 6.839820 TTACGAGAGAGGTTCTTCAAAAAC 57.160 37.500 0.00 0.00 35.87 2.43
3603 7033 3.802685 ACGAGAGAGGTTCTTCAAAAACG 59.197 43.478 0.00 0.00 35.87 3.60
3604 7034 4.049186 CGAGAGAGGTTCTTCAAAAACGA 58.951 43.478 0.00 0.00 35.87 3.85
3605 7035 4.085004 CGAGAGAGGTTCTTCAAAAACGAC 60.085 45.833 0.00 0.00 35.87 4.34
3606 7036 3.802685 AGAGAGGTTCTTCAAAAACGACG 59.197 43.478 0.00 0.00 29.61 5.12
3607 7037 2.287103 AGAGGTTCTTCAAAAACGACGC 59.713 45.455 0.00 0.00 0.00 5.19
3608 7038 1.332686 AGGTTCTTCAAAAACGACGCC 59.667 47.619 0.00 0.00 0.00 5.68
3609 7039 1.332686 GGTTCTTCAAAAACGACGCCT 59.667 47.619 0.00 0.00 0.00 5.52
3610 7040 2.223409 GGTTCTTCAAAAACGACGCCTT 60.223 45.455 0.00 0.00 0.00 4.35
3611 7041 3.033873 GTTCTTCAAAAACGACGCCTTC 58.966 45.455 0.00 0.00 0.00 3.46
3612 7042 2.281517 TCTTCAAAAACGACGCCTTCA 58.718 42.857 0.00 0.00 0.00 3.02
3613 7043 2.678836 TCTTCAAAAACGACGCCTTCAA 59.321 40.909 0.00 0.00 0.00 2.69
3614 7044 2.748461 TCAAAAACGACGCCTTCAAG 57.252 45.000 0.00 0.00 0.00 3.02
3615 7045 2.281517 TCAAAAACGACGCCTTCAAGA 58.718 42.857 0.00 0.00 0.00 3.02
3616 7046 2.678836 TCAAAAACGACGCCTTCAAGAA 59.321 40.909 0.00 0.00 0.00 2.52
3617 7047 3.035942 CAAAAACGACGCCTTCAAGAAG 58.964 45.455 2.83 2.83 38.14 2.85
3628 7058 2.833794 CTTCAAGAAGGGAACGACACA 58.166 47.619 1.86 0.00 34.87 3.72
3629 7059 2.234300 TCAAGAAGGGAACGACACAC 57.766 50.000 0.00 0.00 0.00 3.82
3630 7060 1.483004 TCAAGAAGGGAACGACACACA 59.517 47.619 0.00 0.00 0.00 3.72
3631 7061 2.093394 TCAAGAAGGGAACGACACACAA 60.093 45.455 0.00 0.00 0.00 3.33
3632 7062 2.240493 AGAAGGGAACGACACACAAG 57.760 50.000 0.00 0.00 0.00 3.16
3633 7063 1.485066 AGAAGGGAACGACACACAAGT 59.515 47.619 0.00 0.00 0.00 3.16
3643 7073 2.657296 ACACAAGTGACGCCGTCG 60.657 61.111 13.18 0.23 42.43 5.12
3644 7074 4.059459 CACAAGTGACGCCGTCGC 62.059 66.667 22.31 22.31 42.60 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
101 102 3.341629 AGGGTGGTGCATGGAGGG 61.342 66.667 0.00 0.00 0.00 4.30
110 111 1.127567 TGGTTGGAGAGAGGGTGGTG 61.128 60.000 0.00 0.00 0.00 4.17
111 112 1.128188 GTGGTTGGAGAGAGGGTGGT 61.128 60.000 0.00 0.00 0.00 4.16
112 113 0.838122 AGTGGTTGGAGAGAGGGTGG 60.838 60.000 0.00 0.00 0.00 4.61
113 114 0.322975 CAGTGGTTGGAGAGAGGGTG 59.677 60.000 0.00 0.00 0.00 4.61
114 115 0.104934 ACAGTGGTTGGAGAGAGGGT 60.105 55.000 0.00 0.00 0.00 4.34
115 116 0.610687 GACAGTGGTTGGAGAGAGGG 59.389 60.000 0.00 0.00 0.00 4.30
116 117 0.610687 GGACAGTGGTTGGAGAGAGG 59.389 60.000 0.00 0.00 0.00 3.69
117 118 0.610687 GGGACAGTGGTTGGAGAGAG 59.389 60.000 0.00 0.00 0.00 3.20
118 119 0.191064 AGGGACAGTGGTTGGAGAGA 59.809 55.000 0.00 0.00 0.00 3.10
119 120 0.610687 GAGGGACAGTGGTTGGAGAG 59.389 60.000 0.00 0.00 0.00 3.20
120 121 0.836400 GGAGGGACAGTGGTTGGAGA 60.836 60.000 0.00 0.00 0.00 3.71
121 122 1.127567 TGGAGGGACAGTGGTTGGAG 61.128 60.000 0.00 0.00 0.00 3.86
122 123 0.475632 ATGGAGGGACAGTGGTTGGA 60.476 55.000 0.00 0.00 0.00 3.53
123 124 0.035056 GATGGAGGGACAGTGGTTGG 60.035 60.000 0.00 0.00 0.00 3.77
124 125 0.035056 GGATGGAGGGACAGTGGTTG 60.035 60.000 0.00 0.00 0.00 3.77
125 126 1.208165 GGGATGGAGGGACAGTGGTT 61.208 60.000 0.00 0.00 0.00 3.67
126 127 1.616628 GGGATGGAGGGACAGTGGT 60.617 63.158 0.00 0.00 0.00 4.16
133 134 1.002403 TTGCTACGGGATGGAGGGA 59.998 57.895 0.00 0.00 0.00 4.20
153 154 2.000447 GACTAGGAAACATGTCCGTGC 59.000 52.381 0.00 0.00 43.03 5.34
156 157 5.902681 TGAATAGACTAGGAAACATGTCCG 58.097 41.667 0.00 0.00 43.03 4.79
159 160 9.314321 CGTTAATGAATAGACTAGGAAACATGT 57.686 33.333 0.00 0.00 0.00 3.21
222 223 8.494347 CAGATATGTCGAATTTCCATCTTTCTC 58.506 37.037 0.00 0.00 0.00 2.87
239 240 8.128582 TGAGTGTTTGACAAAAACAGATATGTC 58.871 33.333 20.74 9.78 40.38 3.06
245 246 6.917477 GCATATGAGTGTTTGACAAAAACAGA 59.083 34.615 20.74 8.83 40.38 3.41
246 247 6.696583 TGCATATGAGTGTTTGACAAAAACAG 59.303 34.615 20.74 6.70 40.38 3.16
298 299 1.392589 ATTCCTGCCCATTAAGTGCG 58.607 50.000 0.00 0.00 0.00 5.34
310 311 8.778358 GCTGCCTATACATAAATATATTCCTGC 58.222 37.037 0.00 0.00 0.00 4.85
324 325 3.931907 TTCCACAAGCTGCCTATACAT 57.068 42.857 0.00 0.00 0.00 2.29
328 329 3.201708 AGAAGATTCCACAAGCTGCCTAT 59.798 43.478 0.00 0.00 0.00 2.57
329 330 2.573462 AGAAGATTCCACAAGCTGCCTA 59.427 45.455 0.00 0.00 0.00 3.93
395 396 5.862811 GAGTACATCGACCGGTATGTATAC 58.137 45.833 25.64 19.02 39.90 1.47
437 438 0.179163 TCATCGTGCTCAGCGTACAG 60.179 55.000 0.00 0.00 0.00 2.74
441 442 2.169789 GCATCATCGTGCTCAGCGT 61.170 57.895 0.00 0.00 41.82 5.07
450 451 1.033202 TGCCTTGCATGCATCATCGT 61.033 50.000 23.37 0.00 31.71 3.73
462 463 2.617274 GGACCGAACACTGCCTTGC 61.617 63.158 0.00 0.00 0.00 4.01
463 464 1.227823 TGGACCGAACACTGCCTTG 60.228 57.895 0.00 0.00 0.00 3.61
464 465 1.227853 GTGGACCGAACACTGCCTT 60.228 57.895 0.00 0.00 35.98 4.35
465 466 1.768684 ATGTGGACCGAACACTGCCT 61.769 55.000 0.00 0.00 39.52 4.75
466 467 1.298859 GATGTGGACCGAACACTGCC 61.299 60.000 0.00 0.00 39.52 4.85
467 468 0.602638 TGATGTGGACCGAACACTGC 60.603 55.000 0.00 0.00 39.52 4.40
483 484 7.177568 CCACTATAGGTAGTCTAAGCATGTGAT 59.822 40.741 4.43 0.00 39.12 3.06
539 540 9.981114 TTTGTCGCATCATCTATTTTATCTAGA 57.019 29.630 0.00 0.00 0.00 2.43
551 552 9.888878 CTTCATTTATTATTTGTCGCATCATCT 57.111 29.630 0.00 0.00 0.00 2.90
552 553 9.882996 TCTTCATTTATTATTTGTCGCATCATC 57.117 29.630 0.00 0.00 0.00 2.92
557 558 9.773328 CTCTTTCTTCATTTATTATTTGTCGCA 57.227 29.630 0.00 0.00 0.00 5.10
558 559 9.988350 TCTCTTTCTTCATTTATTATTTGTCGC 57.012 29.630 0.00 0.00 0.00 5.19
591 592 9.929180 GACACATCTTGCCTTGATATATTACTA 57.071 33.333 0.00 0.00 0.00 1.82
592 593 8.654997 AGACACATCTTGCCTTGATATATTACT 58.345 33.333 0.00 0.00 0.00 2.24
593 594 8.839310 AGACACATCTTGCCTTGATATATTAC 57.161 34.615 0.00 0.00 0.00 1.89
597 598 8.253810 GCTATAGACACATCTTGCCTTGATATA 58.746 37.037 3.21 0.00 36.29 0.86
598 599 7.102346 GCTATAGACACATCTTGCCTTGATAT 58.898 38.462 3.21 0.00 36.29 1.63
599 600 6.459066 GCTATAGACACATCTTGCCTTGATA 58.541 40.000 3.21 0.00 36.29 2.15
600 601 5.303971 GCTATAGACACATCTTGCCTTGAT 58.696 41.667 3.21 0.00 36.29 2.57
601 602 4.443457 GGCTATAGACACATCTTGCCTTGA 60.443 45.833 3.21 0.00 39.50 3.02
602 603 3.812053 GGCTATAGACACATCTTGCCTTG 59.188 47.826 3.21 0.00 39.50 3.61
603 604 3.713764 AGGCTATAGACACATCTTGCCTT 59.286 43.478 8.68 0.00 45.01 4.35
604 605 3.312890 AGGCTATAGACACATCTTGCCT 58.687 45.455 8.68 0.00 43.78 4.75
605 606 3.760580 AGGCTATAGACACATCTTGCC 57.239 47.619 8.68 0.00 41.26 4.52
606 607 8.833231 TTTATTAGGCTATAGACACATCTTGC 57.167 34.615 8.68 0.00 36.29 4.01
612 613 9.764363 CACTTCATTTATTAGGCTATAGACACA 57.236 33.333 8.68 0.00 0.00 3.72
613 614 9.765795 ACACTTCATTTATTAGGCTATAGACAC 57.234 33.333 8.68 0.00 0.00 3.67
616 617 9.273016 GCAACACTTCATTTATTAGGCTATAGA 57.727 33.333 3.21 0.00 0.00 1.98
617 618 9.056005 TGCAACACTTCATTTATTAGGCTATAG 57.944 33.333 0.00 0.00 0.00 1.31
618 619 8.972458 TGCAACACTTCATTTATTAGGCTATA 57.028 30.769 0.00 0.00 0.00 1.31
619 620 7.880160 TGCAACACTTCATTTATTAGGCTAT 57.120 32.000 0.00 0.00 0.00 2.97
620 621 7.339212 ACATGCAACACTTCATTTATTAGGCTA 59.661 33.333 0.00 0.00 0.00 3.93
621 622 6.153340 ACATGCAACACTTCATTTATTAGGCT 59.847 34.615 0.00 0.00 0.00 4.58
622 623 6.332630 ACATGCAACACTTCATTTATTAGGC 58.667 36.000 0.00 0.00 0.00 3.93
623 624 9.289303 GTAACATGCAACACTTCATTTATTAGG 57.711 33.333 0.00 0.00 0.00 2.69
624 625 9.289303 GGTAACATGCAACACTTCATTTATTAG 57.711 33.333 0.00 0.00 0.00 1.73
625 626 8.797438 TGGTAACATGCAACACTTCATTTATTA 58.203 29.630 0.00 0.00 46.17 0.98
626 627 7.665690 TGGTAACATGCAACACTTCATTTATT 58.334 30.769 0.00 0.00 46.17 1.40
627 628 7.225784 TGGTAACATGCAACACTTCATTTAT 57.774 32.000 0.00 0.00 46.17 1.40
628 629 6.641169 TGGTAACATGCAACACTTCATTTA 57.359 33.333 0.00 0.00 46.17 1.40
629 630 5.528043 TGGTAACATGCAACACTTCATTT 57.472 34.783 0.00 0.00 46.17 2.32
645 646 8.208903 AGTGGGAAGTAACATATATGTGGTAAC 58.791 37.037 18.94 13.91 41.61 2.50
646 647 8.326765 AGTGGGAAGTAACATATATGTGGTAA 57.673 34.615 18.94 3.13 41.61 2.85
647 648 7.924358 AGTGGGAAGTAACATATATGTGGTA 57.076 36.000 18.94 6.18 41.61 3.25
648 649 6.824958 AGTGGGAAGTAACATATATGTGGT 57.175 37.500 18.94 7.17 41.61 4.16
673 674 9.964354 TGTTAGTAGTCTATGTTACCACTTCTA 57.036 33.333 0.00 0.00 0.00 2.10
674 675 8.874744 TGTTAGTAGTCTATGTTACCACTTCT 57.125 34.615 0.00 0.00 0.00 2.85
675 676 9.517609 CATGTTAGTAGTCTATGTTACCACTTC 57.482 37.037 0.00 0.00 0.00 3.01
676 677 9.032624 ACATGTTAGTAGTCTATGTTACCACTT 57.967 33.333 0.00 0.00 0.00 3.16
677 678 8.467598 CACATGTTAGTAGTCTATGTTACCACT 58.532 37.037 0.00 0.00 0.00 4.00
678 679 7.222224 GCACATGTTAGTAGTCTATGTTACCAC 59.778 40.741 0.00 0.00 0.00 4.16
679 680 7.093684 TGCACATGTTAGTAGTCTATGTTACCA 60.094 37.037 0.00 0.00 0.00 3.25
680 681 7.262772 TGCACATGTTAGTAGTCTATGTTACC 58.737 38.462 0.00 0.00 0.00 2.85
681 682 8.755941 CATGCACATGTTAGTAGTCTATGTTAC 58.244 37.037 0.00 0.00 34.23 2.50
682 683 8.871686 CATGCACATGTTAGTAGTCTATGTTA 57.128 34.615 0.00 0.00 34.23 2.41
683 684 7.776933 CATGCACATGTTAGTAGTCTATGTT 57.223 36.000 0.00 0.00 34.23 2.71
750 751 4.658063 CACCACTAATTTCCACACCCTAA 58.342 43.478 0.00 0.00 0.00 2.69
751 752 3.560453 GCACCACTAATTTCCACACCCTA 60.560 47.826 0.00 0.00 0.00 3.53
774 795 0.107654 GAATAGTGCCCCGACTTGCT 60.108 55.000 0.00 0.00 0.00 3.91
778 799 3.643398 GGGAATAGTGCCCCGACT 58.357 61.111 0.00 0.00 39.81 4.18
786 807 0.250338 GGCGGCTAAGGGGAATAGTG 60.250 60.000 0.00 0.00 0.00 2.74
792 813 2.764128 CTCTGGCGGCTAAGGGGA 60.764 66.667 11.43 0.00 0.00 4.81
793 814 4.554036 GCTCTGGCGGCTAAGGGG 62.554 72.222 11.43 0.00 0.00 4.79
836 858 6.704493 GCGTACATCTTCCTCCATACAAATAA 59.296 38.462 0.00 0.00 0.00 1.40
838 860 5.057149 GCGTACATCTTCCTCCATACAAAT 58.943 41.667 0.00 0.00 0.00 2.32
852 874 3.963428 AGTTGAAGAAGGCGTACATCT 57.037 42.857 0.00 0.00 0.00 2.90
886 934 8.497745 ACATCATAGAAAATATCTCAACCCTGT 58.502 33.333 0.00 0.00 39.71 4.00
915 963 4.837896 ATGCACTCTCTCGATCGATAAA 57.162 40.909 19.78 6.55 0.00 1.40
1015 1234 3.127548 GTGTCCTCCATTTGTATGTGCTG 59.872 47.826 0.00 0.00 0.00 4.41
1118 1340 2.335011 GCAGACCGTTGTTTGCCC 59.665 61.111 0.00 0.00 44.55 5.36
1179 1401 2.523168 TGCCTGACGAGGTGGTGA 60.523 61.111 0.00 0.00 42.15 4.02
1389 1620 0.240145 CGTAGGGCGCGAAGATCATA 59.760 55.000 12.10 0.00 0.00 2.15
1635 1876 1.738350 CTGTCAAGCTCATGCAGGAAG 59.262 52.381 1.37 0.00 42.74 3.46
1955 2226 1.954035 AGGAGGGGTTAGAAGACACC 58.046 55.000 0.00 0.00 43.74 4.16
1983 2254 2.202349 GCGCGCAGGTCAAATCAC 60.202 61.111 29.10 0.00 0.00 3.06
2017 2288 3.749064 GCAGACGTCTCGCTCCCA 61.749 66.667 23.86 0.00 0.00 4.37
2032 2303 1.583495 CCCACTCTAGTGTCGTCGCA 61.583 60.000 9.17 0.00 44.21 5.10
2070 2341 1.303317 ACCATCGCTGTTGGGTTCC 60.303 57.895 9.44 0.00 38.64 3.62
2641 2922 4.602340 ACAGTCAGAACGGTCTTAATGT 57.398 40.909 11.70 11.70 32.81 2.71
2643 2924 5.717078 TGTACAGTCAGAACGGTCTTAAT 57.283 39.130 0.00 0.00 35.36 1.40
2662 2943 7.620491 TCCTTCAACCCTTAGTACATGTATGTA 59.380 37.037 9.18 1.43 41.97 2.29
2663 2944 6.442564 TCCTTCAACCCTTAGTACATGTATGT 59.557 38.462 9.18 2.44 44.48 2.29
2664 2945 6.884832 TCCTTCAACCCTTAGTACATGTATG 58.115 40.000 9.18 0.67 0.00 2.39
2665 2946 7.504926 TTCCTTCAACCCTTAGTACATGTAT 57.495 36.000 9.18 1.24 0.00 2.29
2679 2960 5.819901 CCAATCTCTCACTATTCCTTCAACC 59.180 44.000 0.00 0.00 0.00 3.77
2682 2963 5.721480 TCACCAATCTCTCACTATTCCTTCA 59.279 40.000 0.00 0.00 0.00 3.02
2695 2977 6.966534 AAAACATCACTTTCACCAATCTCT 57.033 33.333 0.00 0.00 0.00 3.10
2709 2991 3.503748 AGGCTCAAGCAGTAAAACATCAC 59.496 43.478 4.13 0.00 44.36 3.06
2826 4131 9.926751 CAATAATGTGTGCTAGAAGTAATGAAG 57.073 33.333 0.00 0.00 0.00 3.02
2893 4198 3.825143 ATGGTAAGCATTTTGATGGCC 57.175 42.857 0.00 0.00 0.00 5.36
2957 4263 9.730146 CAATGTATGTTGAAATTCGAAAATGTG 57.270 29.630 0.00 0.00 0.00 3.21
2966 4272 6.607689 TGTCCGACAATGTATGTTGAAATTC 58.392 36.000 0.00 0.00 45.00 2.17
3034 4340 6.953101 TGGGCAGTTTATTATGTTCTACTGA 58.047 36.000 0.00 0.00 36.07 3.41
3124 4430 6.647334 TGCTCAAGTGGTTGATTATTTCAA 57.353 33.333 0.00 0.00 41.96 2.69
3191 4497 8.799367 TCAATGATGAAAGTTTGAGTGATGATT 58.201 29.630 0.00 0.00 30.99 2.57
3231 4538 4.757149 GCTATGAAACTGGTCAGAACTTGT 59.243 41.667 4.84 0.00 0.00 3.16
3261 4568 8.196771 TCAAAAGAAAAGCACTATCACAAATGT 58.803 29.630 0.00 0.00 0.00 2.71
3272 6702 7.163001 AGTTTCTTCTCAAAAGAAAAGCACT 57.837 32.000 12.98 5.88 44.79 4.40
3307 6737 9.849166 GTCAATAAAAATCACCCTTTATCGAAA 57.151 29.630 0.00 0.00 29.50 3.46
3308 6738 9.238368 AGTCAATAAAAATCACCCTTTATCGAA 57.762 29.630 0.00 0.00 29.50 3.71
3309 6739 8.801882 AGTCAATAAAAATCACCCTTTATCGA 57.198 30.769 0.00 0.00 29.50 3.59
3310 6740 8.673711 TGAGTCAATAAAAATCACCCTTTATCG 58.326 33.333 0.00 0.00 29.50 2.92
3325 6755 9.764363 ACTCGATGCTTATTATGAGTCAATAAA 57.236 29.630 0.00 0.00 31.43 1.40
3326 6756 9.196552 CACTCGATGCTTATTATGAGTCAATAA 57.803 33.333 0.00 0.00 34.67 1.40
3327 6757 8.576442 TCACTCGATGCTTATTATGAGTCAATA 58.424 33.333 0.00 0.00 34.67 1.90
3328 6758 7.436933 TCACTCGATGCTTATTATGAGTCAAT 58.563 34.615 0.00 0.00 34.67 2.57
3329 6759 6.805713 TCACTCGATGCTTATTATGAGTCAA 58.194 36.000 0.00 0.00 34.67 3.18
3330 6760 6.391227 TCACTCGATGCTTATTATGAGTCA 57.609 37.500 0.00 0.00 34.67 3.41
3331 6761 8.023706 TGTATCACTCGATGCTTATTATGAGTC 58.976 37.037 0.00 0.00 34.67 3.36
3332 6762 7.886338 TGTATCACTCGATGCTTATTATGAGT 58.114 34.615 0.00 0.00 37.17 3.41
3333 6763 8.748380 TTGTATCACTCGATGCTTATTATGAG 57.252 34.615 0.00 0.00 35.45 2.90
3334 6764 9.710900 AATTGTATCACTCGATGCTTATTATGA 57.289 29.630 0.00 0.00 35.45 2.15
3337 6767 9.974980 TGTAATTGTATCACTCGATGCTTATTA 57.025 29.630 0.00 0.00 35.45 0.98
3338 6768 8.887036 TGTAATTGTATCACTCGATGCTTATT 57.113 30.769 0.00 0.00 35.45 1.40
3339 6769 8.887036 TTGTAATTGTATCACTCGATGCTTAT 57.113 30.769 0.00 0.00 35.45 1.73
3340 6770 8.764287 CATTGTAATTGTATCACTCGATGCTTA 58.236 33.333 0.00 0.00 35.45 3.09
3341 6771 7.495606 TCATTGTAATTGTATCACTCGATGCTT 59.504 33.333 0.00 0.00 35.45 3.91
3342 6772 6.986231 TCATTGTAATTGTATCACTCGATGCT 59.014 34.615 0.00 0.00 35.45 3.79
3343 6773 7.177498 TCATTGTAATTGTATCACTCGATGC 57.823 36.000 0.00 0.00 35.02 3.91
3344 6774 7.286508 GCTCATTGTAATTGTATCACTCGATG 58.713 38.462 0.00 0.00 32.73 3.84
3345 6775 6.144563 CGCTCATTGTAATTGTATCACTCGAT 59.855 38.462 0.00 0.00 35.50 3.59
3346 6776 5.458779 CGCTCATTGTAATTGTATCACTCGA 59.541 40.000 0.00 0.00 0.00 4.04
3347 6777 5.458779 TCGCTCATTGTAATTGTATCACTCG 59.541 40.000 0.00 0.00 0.00 4.18
3348 6778 6.255670 TGTCGCTCATTGTAATTGTATCACTC 59.744 38.462 0.00 0.00 0.00 3.51
3349 6779 6.036083 GTGTCGCTCATTGTAATTGTATCACT 59.964 38.462 0.00 0.00 0.00 3.41
3350 6780 6.185399 GTGTCGCTCATTGTAATTGTATCAC 58.815 40.000 0.00 0.00 0.00 3.06
3351 6781 5.293324 GGTGTCGCTCATTGTAATTGTATCA 59.707 40.000 0.00 0.00 0.00 2.15
3352 6782 5.277345 GGGTGTCGCTCATTGTAATTGTATC 60.277 44.000 0.00 0.00 0.00 2.24
3353 6783 4.574828 GGGTGTCGCTCATTGTAATTGTAT 59.425 41.667 0.00 0.00 0.00 2.29
3354 6784 3.936453 GGGTGTCGCTCATTGTAATTGTA 59.064 43.478 0.00 0.00 0.00 2.41
3355 6785 2.747446 GGGTGTCGCTCATTGTAATTGT 59.253 45.455 0.00 0.00 0.00 2.71
3356 6786 2.223021 CGGGTGTCGCTCATTGTAATTG 60.223 50.000 0.00 0.00 0.00 2.32
3357 6787 2.006888 CGGGTGTCGCTCATTGTAATT 58.993 47.619 0.00 0.00 0.00 1.40
3358 6788 1.651987 CGGGTGTCGCTCATTGTAAT 58.348 50.000 0.00 0.00 0.00 1.89
3359 6789 0.390603 CCGGGTGTCGCTCATTGTAA 60.391 55.000 0.00 0.00 37.59 2.41
3360 6790 1.216977 CCGGGTGTCGCTCATTGTA 59.783 57.895 0.00 0.00 37.59 2.41
3361 6791 2.047274 CCGGGTGTCGCTCATTGT 60.047 61.111 0.00 0.00 37.59 2.71
3362 6792 3.499737 GCCGGGTGTCGCTCATTG 61.500 66.667 2.18 0.00 37.59 2.82
3363 6793 4.778143 GGCCGGGTGTCGCTCATT 62.778 66.667 2.18 0.00 37.59 2.57
3370 6800 2.650813 CTATGCAGAGGCCGGGTGTC 62.651 65.000 2.18 0.00 40.13 3.67
3371 6801 2.687200 TATGCAGAGGCCGGGTGT 60.687 61.111 2.18 0.00 40.13 4.16
3372 6802 2.109799 CTATGCAGAGGCCGGGTG 59.890 66.667 2.18 0.00 40.13 4.61
3373 6803 2.946988 TAGCTATGCAGAGGCCGGGT 62.947 60.000 10.92 0.00 40.13 5.28
3374 6804 2.164865 CTAGCTATGCAGAGGCCGGG 62.165 65.000 10.92 0.00 40.13 5.73
3375 6805 1.291588 CTAGCTATGCAGAGGCCGG 59.708 63.158 10.92 0.00 40.13 6.13
3376 6806 1.181741 TCCTAGCTATGCAGAGGCCG 61.182 60.000 10.92 0.23 40.13 6.13
3377 6807 1.066286 CATCCTAGCTATGCAGAGGCC 60.066 57.143 10.92 0.00 40.13 5.19
3378 6808 2.383368 CATCCTAGCTATGCAGAGGC 57.617 55.000 10.92 5.36 35.01 4.70
3385 6815 2.141517 GCTGTGTGCATCCTAGCTATG 58.858 52.381 0.00 0.00 42.31 2.23
3386 6816 1.071385 GGCTGTGTGCATCCTAGCTAT 59.929 52.381 12.70 0.00 45.15 2.97
3387 6817 0.465705 GGCTGTGTGCATCCTAGCTA 59.534 55.000 12.70 0.00 45.15 3.32
3388 6818 1.222936 GGCTGTGTGCATCCTAGCT 59.777 57.895 12.70 0.00 45.15 3.32
3389 6819 0.677731 TTGGCTGTGTGCATCCTAGC 60.678 55.000 0.00 0.00 45.15 3.42
3390 6820 1.089920 GTTGGCTGTGTGCATCCTAG 58.910 55.000 0.00 0.00 45.15 3.02
3391 6821 0.399833 TGTTGGCTGTGTGCATCCTA 59.600 50.000 0.00 0.00 45.15 2.94
3392 6822 1.151221 TGTTGGCTGTGTGCATCCT 59.849 52.632 0.00 0.00 45.15 3.24
3393 6823 1.286880 GTGTTGGCTGTGTGCATCC 59.713 57.895 0.00 0.00 45.15 3.51
3394 6824 0.385029 TTGTGTTGGCTGTGTGCATC 59.615 50.000 0.00 0.00 45.15 3.91
3395 6825 0.386476 CTTGTGTTGGCTGTGTGCAT 59.614 50.000 0.00 0.00 45.15 3.96
3396 6826 1.808546 CTTGTGTTGGCTGTGTGCA 59.191 52.632 0.00 0.00 45.15 4.57
3397 6827 1.589727 GCTTGTGTTGGCTGTGTGC 60.590 57.895 0.00 0.00 41.94 4.57
3398 6828 0.526096 GTGCTTGTGTTGGCTGTGTG 60.526 55.000 0.00 0.00 0.00 3.82
3399 6829 0.964860 TGTGCTTGTGTTGGCTGTGT 60.965 50.000 0.00 0.00 0.00 3.72
3400 6830 0.526096 GTGTGCTTGTGTTGGCTGTG 60.526 55.000 0.00 0.00 0.00 3.66
3401 6831 1.809207 GTGTGCTTGTGTTGGCTGT 59.191 52.632 0.00 0.00 0.00 4.40
3402 6832 1.298563 CGTGTGCTTGTGTTGGCTG 60.299 57.895 0.00 0.00 0.00 4.85
3403 6833 3.110139 CGTGTGCTTGTGTTGGCT 58.890 55.556 0.00 0.00 0.00 4.75
3404 6834 2.655044 GCGTGTGCTTGTGTTGGC 60.655 61.111 0.00 0.00 38.39 4.52
3405 6835 1.586042 GTGCGTGTGCTTGTGTTGG 60.586 57.895 0.00 0.00 43.34 3.77
3406 6836 1.133363 GTGTGCGTGTGCTTGTGTTG 61.133 55.000 0.00 0.00 43.34 3.33
3407 6837 1.136565 GTGTGCGTGTGCTTGTGTT 59.863 52.632 0.00 0.00 43.34 3.32
3408 6838 1.581727 TTGTGTGCGTGTGCTTGTGT 61.582 50.000 0.00 0.00 43.34 3.72
3409 6839 0.455802 TTTGTGTGCGTGTGCTTGTG 60.456 50.000 0.00 0.00 43.34 3.33
3410 6840 0.179166 CTTTGTGTGCGTGTGCTTGT 60.179 50.000 0.00 0.00 43.34 3.16
3411 6841 0.098552 TCTTTGTGTGCGTGTGCTTG 59.901 50.000 0.00 0.00 43.34 4.01
3412 6842 1.002468 GATCTTTGTGTGCGTGTGCTT 60.002 47.619 0.00 0.00 43.34 3.91
3413 6843 0.588252 GATCTTTGTGTGCGTGTGCT 59.412 50.000 0.00 0.00 43.34 4.40
3414 6844 0.588252 AGATCTTTGTGTGCGTGTGC 59.412 50.000 0.00 0.00 43.20 4.57
3415 6845 1.136529 CGAGATCTTTGTGTGCGTGTG 60.137 52.381 0.00 0.00 0.00 3.82
3416 6846 1.139989 CGAGATCTTTGTGTGCGTGT 58.860 50.000 0.00 0.00 0.00 4.49
3417 6847 0.179240 GCGAGATCTTTGTGTGCGTG 60.179 55.000 0.00 0.00 0.00 5.34
3418 6848 1.291877 GGCGAGATCTTTGTGTGCGT 61.292 55.000 0.00 0.00 0.00 5.24
3419 6849 1.421485 GGCGAGATCTTTGTGTGCG 59.579 57.895 0.00 0.00 0.00 5.34
3420 6850 1.421485 CGGCGAGATCTTTGTGTGC 59.579 57.895 0.00 0.00 0.00 4.57
3421 6851 1.970917 GCCGGCGAGATCTTTGTGTG 61.971 60.000 12.58 0.00 0.00 3.82
3422 6852 1.741770 GCCGGCGAGATCTTTGTGT 60.742 57.895 12.58 0.00 0.00 3.72
3423 6853 1.298157 TTGCCGGCGAGATCTTTGTG 61.298 55.000 23.90 0.00 0.00 3.33
3424 6854 1.003839 TTGCCGGCGAGATCTTTGT 60.004 52.632 23.90 0.00 0.00 2.83
3425 6855 1.709147 CCTTGCCGGCGAGATCTTTG 61.709 60.000 40.07 21.14 0.00 2.77
3426 6856 1.450312 CCTTGCCGGCGAGATCTTT 60.450 57.895 40.07 0.00 0.00 2.52
3427 6857 2.187946 CCTTGCCGGCGAGATCTT 59.812 61.111 40.07 0.00 0.00 2.40
3428 6858 2.759973 TCCTTGCCGGCGAGATCT 60.760 61.111 40.07 0.00 0.00 2.75
3429 6859 2.279784 CTCCTTGCCGGCGAGATC 60.280 66.667 40.07 6.39 0.00 2.75
3430 6860 4.537433 GCTCCTTGCCGGCGAGAT 62.537 66.667 40.07 0.00 35.15 2.75
3432 6862 2.852495 TTTAGCTCCTTGCCGGCGAG 62.852 60.000 33.44 33.44 44.23 5.03
3433 6863 2.252072 ATTTAGCTCCTTGCCGGCGA 62.252 55.000 23.90 20.69 44.23 5.54
3434 6864 1.776034 GATTTAGCTCCTTGCCGGCG 61.776 60.000 23.90 8.36 44.23 6.46
3435 6865 0.748005 TGATTTAGCTCCTTGCCGGC 60.748 55.000 22.73 22.73 44.23 6.13
3436 6866 1.972872 ATGATTTAGCTCCTTGCCGG 58.027 50.000 0.00 0.00 44.23 6.13
3437 6867 3.733337 AGTATGATTTAGCTCCTTGCCG 58.267 45.455 0.00 0.00 44.23 5.69
3438 6868 5.929415 GTCTAGTATGATTTAGCTCCTTGCC 59.071 44.000 0.00 0.00 44.23 4.52
3439 6869 5.929415 GGTCTAGTATGATTTAGCTCCTTGC 59.071 44.000 0.00 0.00 43.29 4.01
3440 6870 7.055667 TGGTCTAGTATGATTTAGCTCCTTG 57.944 40.000 0.00 0.00 0.00 3.61
3441 6871 7.676683 TTGGTCTAGTATGATTTAGCTCCTT 57.323 36.000 0.00 0.00 0.00 3.36
3442 6872 7.676683 TTTGGTCTAGTATGATTTAGCTCCT 57.323 36.000 0.00 0.00 0.00 3.69
3443 6873 6.425417 GCTTTGGTCTAGTATGATTTAGCTCC 59.575 42.308 0.00 0.00 0.00 4.70
3444 6874 7.213678 AGCTTTGGTCTAGTATGATTTAGCTC 58.786 38.462 0.00 0.00 28.73 4.09
3445 6875 7.130681 AGCTTTGGTCTAGTATGATTTAGCT 57.869 36.000 0.00 0.00 0.00 3.32
3446 6876 8.930760 CATAGCTTTGGTCTAGTATGATTTAGC 58.069 37.037 0.00 0.00 0.00 3.09
3447 6877 8.930760 GCATAGCTTTGGTCTAGTATGATTTAG 58.069 37.037 6.29 0.00 0.00 1.85
3448 6878 7.878127 GGCATAGCTTTGGTCTAGTATGATTTA 59.122 37.037 6.29 0.00 0.00 1.40
3449 6879 6.712547 GGCATAGCTTTGGTCTAGTATGATTT 59.287 38.462 6.29 0.00 0.00 2.17
3450 6880 6.043706 AGGCATAGCTTTGGTCTAGTATGATT 59.956 38.462 6.29 0.00 0.00 2.57
3451 6881 5.545723 AGGCATAGCTTTGGTCTAGTATGAT 59.454 40.000 6.29 0.00 0.00 2.45
3452 6882 4.901849 AGGCATAGCTTTGGTCTAGTATGA 59.098 41.667 6.29 0.00 0.00 2.15
3453 6883 5.220710 AGGCATAGCTTTGGTCTAGTATG 57.779 43.478 6.29 0.00 0.00 2.39
3454 6884 5.482175 CCTAGGCATAGCTTTGGTCTAGTAT 59.518 44.000 15.21 0.00 0.00 2.12
3455 6885 4.833380 CCTAGGCATAGCTTTGGTCTAGTA 59.167 45.833 15.21 0.00 0.00 1.82
3456 6886 3.643792 CCTAGGCATAGCTTTGGTCTAGT 59.356 47.826 15.21 0.00 0.00 2.57
3457 6887 3.556004 GCCTAGGCATAGCTTTGGTCTAG 60.556 52.174 29.33 9.38 41.49 2.43
3458 6888 2.368875 GCCTAGGCATAGCTTTGGTCTA 59.631 50.000 29.33 0.27 41.49 2.59
3459 6889 1.141858 GCCTAGGCATAGCTTTGGTCT 59.858 52.381 29.33 0.00 41.49 3.85
3460 6890 1.598882 GCCTAGGCATAGCTTTGGTC 58.401 55.000 29.33 0.00 41.49 4.02
3461 6891 3.808984 GCCTAGGCATAGCTTTGGT 57.191 52.632 29.33 0.00 41.49 3.67
3472 6902 2.237392 TCCTTTTTCTCTCTGCCTAGGC 59.763 50.000 27.71 27.71 42.35 3.93
3473 6903 4.559862 TTCCTTTTTCTCTCTGCCTAGG 57.440 45.455 3.67 3.67 0.00 3.02
3474 6904 6.884280 TTTTTCCTTTTTCTCTCTGCCTAG 57.116 37.500 0.00 0.00 0.00 3.02
3494 6924 4.825085 TCTTATCGCTTTGGGACTGTTTTT 59.175 37.500 0.00 0.00 0.00 1.94
3495 6925 4.394729 TCTTATCGCTTTGGGACTGTTTT 58.605 39.130 0.00 0.00 0.00 2.43
3496 6926 4.015872 TCTTATCGCTTTGGGACTGTTT 57.984 40.909 0.00 0.00 0.00 2.83
3497 6927 3.695830 TCTTATCGCTTTGGGACTGTT 57.304 42.857 0.00 0.00 0.00 3.16
3498 6928 3.244422 TGTTCTTATCGCTTTGGGACTGT 60.244 43.478 0.00 0.00 0.00 3.55
3499 6929 3.334691 TGTTCTTATCGCTTTGGGACTG 58.665 45.455 0.00 0.00 0.00 3.51
3500 6930 3.600388 CTGTTCTTATCGCTTTGGGACT 58.400 45.455 0.00 0.00 0.00 3.85
3501 6931 2.096013 GCTGTTCTTATCGCTTTGGGAC 59.904 50.000 0.00 0.00 0.00 4.46
3502 6932 2.356135 GCTGTTCTTATCGCTTTGGGA 58.644 47.619 0.00 0.00 0.00 4.37
3503 6933 1.062587 CGCTGTTCTTATCGCTTTGGG 59.937 52.381 0.00 0.00 0.00 4.12
3504 6934 1.999735 TCGCTGTTCTTATCGCTTTGG 59.000 47.619 0.00 0.00 0.00 3.28
3505 6935 2.668457 AGTCGCTGTTCTTATCGCTTTG 59.332 45.455 0.00 0.00 0.00 2.77
3506 6936 2.960819 AGTCGCTGTTCTTATCGCTTT 58.039 42.857 0.00 0.00 0.00 3.51
3507 6937 2.656560 AGTCGCTGTTCTTATCGCTT 57.343 45.000 0.00 0.00 0.00 4.68
3508 6938 2.541999 GCTAGTCGCTGTTCTTATCGCT 60.542 50.000 0.00 0.00 35.14 4.93
3509 6939 1.781998 GCTAGTCGCTGTTCTTATCGC 59.218 52.381 0.00 0.00 35.14 4.58
3510 6940 3.066369 TGCTAGTCGCTGTTCTTATCG 57.934 47.619 0.00 0.00 40.11 2.92
3511 6941 4.363999 ACATGCTAGTCGCTGTTCTTATC 58.636 43.478 0.00 0.00 40.11 1.75
3512 6942 4.392921 ACATGCTAGTCGCTGTTCTTAT 57.607 40.909 0.00 0.00 40.11 1.73
3513 6943 3.868757 ACATGCTAGTCGCTGTTCTTA 57.131 42.857 0.00 0.00 40.11 2.10
3514 6944 2.751166 ACATGCTAGTCGCTGTTCTT 57.249 45.000 0.00 0.00 40.11 2.52
3515 6945 2.492088 TGTACATGCTAGTCGCTGTTCT 59.508 45.455 0.00 0.00 40.11 3.01
3516 6946 2.854777 CTGTACATGCTAGTCGCTGTTC 59.145 50.000 0.00 0.00 40.11 3.18
3517 6947 2.881074 CTGTACATGCTAGTCGCTGTT 58.119 47.619 0.00 0.00 40.11 3.16
3518 6948 1.469940 GCTGTACATGCTAGTCGCTGT 60.470 52.381 0.00 0.00 40.11 4.40
3519 6949 1.203928 GCTGTACATGCTAGTCGCTG 58.796 55.000 0.00 0.00 40.11 5.18
3520 6950 0.248661 CGCTGTACATGCTAGTCGCT 60.249 55.000 13.14 0.00 40.11 4.93
3521 6951 0.248498 TCGCTGTACATGCTAGTCGC 60.248 55.000 13.14 3.28 39.77 5.19
3522 6952 1.202143 TGTCGCTGTACATGCTAGTCG 60.202 52.381 13.14 0.00 0.00 4.18
3523 6953 2.561733 TGTCGCTGTACATGCTAGTC 57.438 50.000 13.14 4.50 0.00 2.59
3524 6954 2.607187 GTTGTCGCTGTACATGCTAGT 58.393 47.619 13.14 0.00 0.00 2.57
3525 6955 1.927174 GGTTGTCGCTGTACATGCTAG 59.073 52.381 13.14 0.00 0.00 3.42
3526 6956 1.404986 GGGTTGTCGCTGTACATGCTA 60.405 52.381 13.14 2.68 0.00 3.49
3527 6957 0.673644 GGGTTGTCGCTGTACATGCT 60.674 55.000 13.14 0.00 0.00 3.79
3528 6958 0.673644 AGGGTTGTCGCTGTACATGC 60.674 55.000 0.00 1.44 35.52 4.06
3529 6959 1.464608 CAAGGGTTGTCGCTGTACATG 59.535 52.381 0.00 0.00 36.95 3.21
3530 6960 1.610624 CCAAGGGTTGTCGCTGTACAT 60.611 52.381 0.00 0.00 36.95 2.29
3531 6961 0.250124 CCAAGGGTTGTCGCTGTACA 60.250 55.000 0.00 0.00 36.95 2.90
3532 6962 1.574702 GCCAAGGGTTGTCGCTGTAC 61.575 60.000 0.00 0.00 36.95 2.90
3533 6963 1.302192 GCCAAGGGTTGTCGCTGTA 60.302 57.895 0.00 0.00 36.95 2.74
3534 6964 2.594592 GCCAAGGGTTGTCGCTGT 60.595 61.111 0.00 0.00 36.95 4.40
3535 6965 1.856265 GAAGCCAAGGGTTGTCGCTG 61.856 60.000 8.47 0.00 36.95 5.18
3536 6966 1.600916 GAAGCCAAGGGTTGTCGCT 60.601 57.895 8.47 0.00 35.84 4.93
3537 6967 1.452145 TTGAAGCCAAGGGTTGTCGC 61.452 55.000 8.47 0.00 35.84 5.19
3538 6968 0.310854 GTTGAAGCCAAGGGTTGTCG 59.689 55.000 8.47 0.00 35.84 4.35
3539 6969 1.692411 AGTTGAAGCCAAGGGTTGTC 58.308 50.000 8.47 0.00 35.84 3.18
3540 6970 3.157087 CATAGTTGAAGCCAAGGGTTGT 58.843 45.455 8.47 0.00 35.84 3.32
3541 6971 3.157087 ACATAGTTGAAGCCAAGGGTTG 58.843 45.455 8.47 0.00 35.84 3.77
3542 6972 3.181434 TGACATAGTTGAAGCCAAGGGTT 60.181 43.478 2.72 2.72 38.65 4.11
3543 6973 2.375174 TGACATAGTTGAAGCCAAGGGT 59.625 45.455 0.00 0.00 32.06 4.34
3544 6974 3.071874 TGACATAGTTGAAGCCAAGGG 57.928 47.619 0.00 0.00 32.06 3.95
3545 6975 4.095483 GTCATGACATAGTTGAAGCCAAGG 59.905 45.833 21.07 0.00 32.06 3.61
3546 6976 4.696877 TGTCATGACATAGTTGAAGCCAAG 59.303 41.667 24.56 0.00 36.21 3.61
3547 6977 4.650734 TGTCATGACATAGTTGAAGCCAA 58.349 39.130 24.56 0.00 36.21 4.52
3548 6978 4.256110 CTGTCATGACATAGTTGAAGCCA 58.744 43.478 28.00 1.38 41.01 4.75
3549 6979 3.064545 GCTGTCATGACATAGTTGAAGCC 59.935 47.826 28.00 7.38 41.01 4.35
3550 6980 3.686241 TGCTGTCATGACATAGTTGAAGC 59.314 43.478 28.00 23.24 41.01 3.86
3551 6981 6.536224 TGTATGCTGTCATGACATAGTTGAAG 59.464 38.462 28.00 14.92 41.01 3.02
3552 6982 6.405538 TGTATGCTGTCATGACATAGTTGAA 58.594 36.000 28.00 11.84 41.01 2.69
3553 6983 5.976458 TGTATGCTGTCATGACATAGTTGA 58.024 37.500 28.00 9.43 41.01 3.18
3554 6984 6.856135 ATGTATGCTGTCATGACATAGTTG 57.144 37.500 28.00 17.01 41.01 3.16
3556 6986 9.645059 GTAATATGTATGCTGTCATGACATAGT 57.355 33.333 28.00 16.63 41.01 2.12
3557 6987 8.801913 CGTAATATGTATGCTGTCATGACATAG 58.198 37.037 28.00 18.43 41.01 2.23
3558 6988 8.519526 TCGTAATATGTATGCTGTCATGACATA 58.480 33.333 28.00 19.89 41.01 2.29
3559 6989 7.378181 TCGTAATATGTATGCTGTCATGACAT 58.622 34.615 28.00 16.44 41.01 3.06
3560 6990 6.744112 TCGTAATATGTATGCTGTCATGACA 58.256 36.000 26.33 26.33 39.32 3.58
3561 6991 7.084486 TCTCGTAATATGTATGCTGTCATGAC 58.916 38.462 19.27 19.27 34.22 3.06
3562 6992 7.174946 TCTCTCGTAATATGTATGCTGTCATGA 59.825 37.037 0.00 0.00 34.22 3.07
3563 6993 7.308435 TCTCTCGTAATATGTATGCTGTCATG 58.692 38.462 0.00 0.00 34.22 3.07
3564 6994 7.362487 CCTCTCTCGTAATATGTATGCTGTCAT 60.362 40.741 0.00 0.00 36.73 3.06
3565 6995 6.072452 CCTCTCTCGTAATATGTATGCTGTCA 60.072 42.308 0.00 0.00 0.00 3.58
3566 6996 6.072397 ACCTCTCTCGTAATATGTATGCTGTC 60.072 42.308 0.00 0.00 0.00 3.51
3567 6997 5.770663 ACCTCTCTCGTAATATGTATGCTGT 59.229 40.000 0.00 0.00 0.00 4.40
3568 6998 6.260870 ACCTCTCTCGTAATATGTATGCTG 57.739 41.667 0.00 0.00 0.00 4.41
3569 6999 6.717540 AGAACCTCTCTCGTAATATGTATGCT 59.282 38.462 0.00 0.00 0.00 3.79
3570 7000 6.915349 AGAACCTCTCTCGTAATATGTATGC 58.085 40.000 0.00 0.00 0.00 3.14
3571 7001 8.568794 TGAAGAACCTCTCTCGTAATATGTATG 58.431 37.037 0.00 0.00 31.02 2.39
3572 7002 8.693120 TGAAGAACCTCTCTCGTAATATGTAT 57.307 34.615 0.00 0.00 31.02 2.29
3573 7003 8.515695 TTGAAGAACCTCTCTCGTAATATGTA 57.484 34.615 0.00 0.00 31.02 2.29
3574 7004 7.406031 TTGAAGAACCTCTCTCGTAATATGT 57.594 36.000 0.00 0.00 31.02 2.29
3575 7005 8.703604 TTTTGAAGAACCTCTCTCGTAATATG 57.296 34.615 0.00 0.00 31.02 1.78
3576 7006 9.152595 GTTTTTGAAGAACCTCTCTCGTAATAT 57.847 33.333 0.00 0.00 31.02 1.28
3577 7007 7.327761 CGTTTTTGAAGAACCTCTCTCGTAATA 59.672 37.037 0.00 0.00 31.02 0.98
3578 7008 6.145696 CGTTTTTGAAGAACCTCTCTCGTAAT 59.854 38.462 0.00 0.00 31.02 1.89
3579 7009 5.461078 CGTTTTTGAAGAACCTCTCTCGTAA 59.539 40.000 0.00 0.00 31.02 3.18
3580 7010 4.980434 CGTTTTTGAAGAACCTCTCTCGTA 59.020 41.667 0.00 0.00 31.02 3.43
3581 7011 3.802685 CGTTTTTGAAGAACCTCTCTCGT 59.197 43.478 0.00 0.00 31.02 4.18
3582 7012 4.049186 TCGTTTTTGAAGAACCTCTCTCG 58.951 43.478 0.00 0.00 31.02 4.04
3583 7013 4.085004 CGTCGTTTTTGAAGAACCTCTCTC 60.085 45.833 0.00 0.00 31.02 3.20
3584 7014 3.802685 CGTCGTTTTTGAAGAACCTCTCT 59.197 43.478 0.00 0.00 35.13 3.10
3585 7015 3.604085 GCGTCGTTTTTGAAGAACCTCTC 60.604 47.826 0.00 0.00 0.00 3.20
3586 7016 2.287103 GCGTCGTTTTTGAAGAACCTCT 59.713 45.455 0.00 0.00 0.00 3.69
3587 7017 2.601504 GGCGTCGTTTTTGAAGAACCTC 60.602 50.000 0.00 0.00 0.00 3.85
3588 7018 1.332686 GGCGTCGTTTTTGAAGAACCT 59.667 47.619 0.00 0.00 0.00 3.50
3589 7019 1.332686 AGGCGTCGTTTTTGAAGAACC 59.667 47.619 0.00 0.00 0.00 3.62
3590 7020 2.750301 AGGCGTCGTTTTTGAAGAAC 57.250 45.000 0.00 0.00 0.00 3.01
3591 7021 2.678836 TGAAGGCGTCGTTTTTGAAGAA 59.321 40.909 0.00 0.00 0.00 2.52
3592 7022 2.281517 TGAAGGCGTCGTTTTTGAAGA 58.718 42.857 0.00 0.00 0.00 2.87
3593 7023 2.748461 TGAAGGCGTCGTTTTTGAAG 57.252 45.000 0.00 0.00 0.00 3.02
3594 7024 2.678836 TCTTGAAGGCGTCGTTTTTGAA 59.321 40.909 0.00 0.00 0.00 2.69
3595 7025 2.281517 TCTTGAAGGCGTCGTTTTTGA 58.718 42.857 0.00 0.00 0.00 2.69
3596 7026 2.748461 TCTTGAAGGCGTCGTTTTTG 57.252 45.000 0.00 0.00 0.00 2.44
3597 7027 2.032924 CCTTCTTGAAGGCGTCGTTTTT 59.967 45.455 15.43 0.00 32.43 1.94
3598 7028 1.602377 CCTTCTTGAAGGCGTCGTTTT 59.398 47.619 15.43 0.00 32.43 2.43
3599 7029 1.226746 CCTTCTTGAAGGCGTCGTTT 58.773 50.000 15.43 0.00 32.43 3.60
3600 7030 0.602905 CCCTTCTTGAAGGCGTCGTT 60.603 55.000 20.71 0.00 38.63 3.85
3601 7031 1.004918 CCCTTCTTGAAGGCGTCGT 60.005 57.895 20.71 0.00 38.63 4.34
3602 7032 0.320421 TTCCCTTCTTGAAGGCGTCG 60.320 55.000 20.71 9.66 38.63 5.12
3603 7033 1.157585 GTTCCCTTCTTGAAGGCGTC 58.842 55.000 20.71 10.58 38.63 5.19
3604 7034 0.602905 CGTTCCCTTCTTGAAGGCGT 60.603 55.000 20.71 0.00 38.63 5.68
3605 7035 0.320421 TCGTTCCCTTCTTGAAGGCG 60.320 55.000 20.71 18.28 38.63 5.52
3606 7036 1.157585 GTCGTTCCCTTCTTGAAGGC 58.842 55.000 20.71 9.02 38.63 4.35
3607 7037 2.143925 GTGTCGTTCCCTTCTTGAAGG 58.856 52.381 19.53 19.53 39.68 3.46
3608 7038 2.544267 GTGTGTCGTTCCCTTCTTGAAG 59.456 50.000 3.55 3.55 0.00 3.02
3609 7039 2.093394 TGTGTGTCGTTCCCTTCTTGAA 60.093 45.455 0.00 0.00 0.00 2.69
3610 7040 1.483004 TGTGTGTCGTTCCCTTCTTGA 59.517 47.619 0.00 0.00 0.00 3.02
3611 7041 1.948104 TGTGTGTCGTTCCCTTCTTG 58.052 50.000 0.00 0.00 0.00 3.02
3612 7042 2.093128 ACTTGTGTGTCGTTCCCTTCTT 60.093 45.455 0.00 0.00 0.00 2.52
3613 7043 1.485066 ACTTGTGTGTCGTTCCCTTCT 59.515 47.619 0.00 0.00 0.00 2.85
3614 7044 1.597663 CACTTGTGTGTCGTTCCCTTC 59.402 52.381 0.00 0.00 39.24 3.46
3615 7045 1.208535 TCACTTGTGTGTCGTTCCCTT 59.791 47.619 0.46 0.00 44.14 3.95
3616 7046 0.828022 TCACTTGTGTGTCGTTCCCT 59.172 50.000 0.46 0.00 44.14 4.20
3617 7047 0.935196 GTCACTTGTGTGTCGTTCCC 59.065 55.000 0.46 0.00 44.14 3.97
3618 7048 0.575390 CGTCACTTGTGTGTCGTTCC 59.425 55.000 7.43 0.00 45.54 3.62
3623 7053 1.818221 GACGGCGTCACTTGTGTGTC 61.818 60.000 33.07 2.98 44.14 3.67
3624 7054 1.881252 GACGGCGTCACTTGTGTGT 60.881 57.895 33.07 0.00 44.14 3.72
3625 7055 2.927618 CGACGGCGTCACTTGTGTG 61.928 63.158 35.62 15.81 45.07 3.82
3626 7056 2.657296 CGACGGCGTCACTTGTGT 60.657 61.111 35.62 0.00 32.09 3.72
3627 7057 4.059459 GCGACGGCGTCACTTGTG 62.059 66.667 35.62 20.98 40.36 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.