Multiple sequence alignment - TraesCS7D01G530400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G530400 chr7D 100.000 4427 0 0 1 4427 625228701 625224275 0.000000e+00 8176.0
1 TraesCS7D01G530400 chr7D 85.111 2485 330 24 975 3432 625355428 625352957 0.000000e+00 2503.0
2 TraesCS7D01G530400 chr7D 84.634 2473 362 12 937 3405 625250474 625252932 0.000000e+00 2446.0
3 TraesCS7D01G530400 chr7B 93.037 3260 210 14 998 4245 723929175 723932429 0.000000e+00 4747.0
4 TraesCS7D01G530400 chr7B 89.403 2293 225 11 935 3214 723907619 723909906 0.000000e+00 2872.0
5 TraesCS7D01G530400 chr7B 85.222 2497 325 29 975 3441 724955962 724953480 0.000000e+00 2527.0
6 TraesCS7D01G530400 chr7B 83.992 2530 379 15 935 3459 723903010 723900502 0.000000e+00 2405.0
7 TraesCS7D01G530400 chr7B 89.930 1003 67 7 3248 4245 723909906 723910879 0.000000e+00 1262.0
8 TraesCS7D01G530400 chr7B 87.812 320 11 14 289 598 723928194 723928495 2.530000e-92 350.0
9 TraesCS7D01G530400 chr7B 98.039 51 1 0 626 676 723928493 723928543 6.100000e-14 89.8
10 TraesCS7D01G530400 chr7A 94.049 3075 170 5 1180 4245 720885032 720888102 0.000000e+00 4652.0
11 TraesCS7D01G530400 chr7A 83.673 2603 377 31 935 3518 720864404 720861831 0.000000e+00 2409.0
12 TraesCS7D01G530400 chr7A 96.667 90 2 1 568 656 720874987 720875076 9.920000e-32 148.0
13 TraesCS7D01G530400 chr7A 97.590 83 2 0 752 834 720875079 720875161 4.620000e-30 143.0
14 TraesCS7D01G530400 chr6A 90.562 3115 279 12 935 4041 608493858 608490751 0.000000e+00 4109.0
15 TraesCS7D01G530400 chr6A 88.649 185 20 1 4061 4245 608490404 608490221 1.600000e-54 224.0
16 TraesCS7D01G530400 chr1D 81.983 2431 402 24 993 3405 453113335 453115747 0.000000e+00 2030.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G530400 chr7D 625224275 625228701 4426 True 8176.000000 8176 100.000000 1 4427 1 chr7D.!!$R1 4426
1 TraesCS7D01G530400 chr7D 625352957 625355428 2471 True 2503.000000 2503 85.111000 975 3432 1 chr7D.!!$R2 2457
2 TraesCS7D01G530400 chr7D 625250474 625252932 2458 False 2446.000000 2446 84.634000 937 3405 1 chr7D.!!$F1 2468
3 TraesCS7D01G530400 chr7B 724953480 724955962 2482 True 2527.000000 2527 85.222000 975 3441 1 chr7B.!!$R2 2466
4 TraesCS7D01G530400 chr7B 723900502 723903010 2508 True 2405.000000 2405 83.992000 935 3459 1 chr7B.!!$R1 2524
5 TraesCS7D01G530400 chr7B 723907619 723910879 3260 False 2067.000000 2872 89.666500 935 4245 2 chr7B.!!$F1 3310
6 TraesCS7D01G530400 chr7B 723928194 723932429 4235 False 1728.933333 4747 92.962667 289 4245 3 chr7B.!!$F2 3956
7 TraesCS7D01G530400 chr7A 720885032 720888102 3070 False 4652.000000 4652 94.049000 1180 4245 1 chr7A.!!$F1 3065
8 TraesCS7D01G530400 chr7A 720861831 720864404 2573 True 2409.000000 2409 83.673000 935 3518 1 chr7A.!!$R1 2583
9 TraesCS7D01G530400 chr6A 608490221 608493858 3637 True 2166.500000 4109 89.605500 935 4245 2 chr6A.!!$R1 3310
10 TraesCS7D01G530400 chr1D 453113335 453115747 2412 False 2030.000000 2030 81.983000 993 3405 1 chr1D.!!$F1 2412

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
232 233 0.028770 TGAAAAACGGTGCAGCGAAG 59.971 50.0 41.29 16.27 0.00 3.79 F
430 431 0.039074 GTGACTCACTCACCGACAGG 60.039 60.0 1.58 0.00 43.35 4.00 F
434 435 0.174389 CTCACTCACCGACAGGATGG 59.826 60.0 0.00 0.00 43.62 3.51 F
609 620 0.175989 GGAAACTAGGCGGAGAGTGG 59.824 60.0 0.00 0.00 0.00 4.00 F
720 731 0.179009 TATGGCTGCTTCCATGAGGC 60.179 55.0 17.04 0.00 45.84 4.70 F
750 761 0.328258 GGAAGCTTGCCTTGGGACTA 59.672 55.0 2.10 0.00 32.78 2.59 F
2193 2672 0.250124 CGGCTGTTAGTGGTGGTTCA 60.250 55.0 0.00 0.00 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1159 1612 1.273327 GGAGGCAGTTTGGGAAATGTG 59.727 52.381 0.0 0.0 33.58 3.21 R
1356 1812 1.288127 CAACTGAGCTTGCTTGGCC 59.712 57.895 0.0 0.0 0.00 5.36 R
1428 1891 2.032620 TCGGTAGGAGAATGGAAGCTC 58.967 52.381 0.0 0.0 0.00 4.09 R
1705 2175 3.831911 CCCCAATCAACAGCCTTAAAAGA 59.168 43.478 0.0 0.0 0.00 2.52 R
1751 2221 5.210430 TGAGGTTGCCATCATAATCCAATT 58.790 37.500 0.0 0.0 0.00 2.32 R
2196 2675 8.788806 CGTAGTGTCTTAGGAATCTTGAGATAT 58.211 37.037 0.0 0.0 33.73 1.63 R
3718 4266 0.108945 GATTTGCTGCTGCTCCAACC 60.109 55.000 17.0 0.0 40.48 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.849111 CTCTTCGCTCAGAACAAATACC 57.151 45.455 0.00 0.00 34.66 2.73
22 23 3.250744 TCTTCGCTCAGAACAAATACCG 58.749 45.455 0.00 0.00 34.66 4.02
23 24 2.736144 TCGCTCAGAACAAATACCGT 57.264 45.000 0.00 0.00 0.00 4.83
24 25 3.034721 TCGCTCAGAACAAATACCGTT 57.965 42.857 0.00 0.00 0.00 4.44
25 26 3.395639 TCGCTCAGAACAAATACCGTTT 58.604 40.909 0.00 0.00 0.00 3.60
26 27 3.810941 TCGCTCAGAACAAATACCGTTTT 59.189 39.130 0.00 0.00 0.00 2.43
27 28 4.084223 TCGCTCAGAACAAATACCGTTTTC 60.084 41.667 0.00 0.00 0.00 2.29
28 29 4.319190 CGCTCAGAACAAATACCGTTTTCA 60.319 41.667 0.00 0.00 0.00 2.69
29 30 5.516090 GCTCAGAACAAATACCGTTTTCAA 58.484 37.500 0.00 0.00 0.00 2.69
30 31 6.149633 GCTCAGAACAAATACCGTTTTCAAT 58.850 36.000 0.00 0.00 0.00 2.57
31 32 7.302524 GCTCAGAACAAATACCGTTTTCAATA 58.697 34.615 0.00 0.00 0.00 1.90
32 33 7.481798 GCTCAGAACAAATACCGTTTTCAATAG 59.518 37.037 0.00 0.00 0.00 1.73
33 34 7.302524 TCAGAACAAATACCGTTTTCAATAGC 58.697 34.615 0.00 0.00 0.00 2.97
34 35 7.041030 TCAGAACAAATACCGTTTTCAATAGCA 60.041 33.333 0.00 0.00 0.00 3.49
35 36 7.271223 CAGAACAAATACCGTTTTCAATAGCAG 59.729 37.037 0.00 0.00 0.00 4.24
36 37 5.399013 ACAAATACCGTTTTCAATAGCAGC 58.601 37.500 0.00 0.00 0.00 5.25
37 38 4.632538 AATACCGTTTTCAATAGCAGCC 57.367 40.909 0.00 0.00 0.00 4.85
38 39 1.173913 ACCGTTTTCAATAGCAGCCC 58.826 50.000 0.00 0.00 0.00 5.19
39 40 1.173043 CCGTTTTCAATAGCAGCCCA 58.827 50.000 0.00 0.00 0.00 5.36
40 41 1.133025 CCGTTTTCAATAGCAGCCCAG 59.867 52.381 0.00 0.00 0.00 4.45
41 42 1.468054 CGTTTTCAATAGCAGCCCAGC 60.468 52.381 0.00 0.00 0.00 4.85
42 43 1.134995 GTTTTCAATAGCAGCCCAGCC 60.135 52.381 0.00 0.00 34.23 4.85
43 44 0.684153 TTTCAATAGCAGCCCAGCCC 60.684 55.000 0.00 0.00 34.23 5.19
44 45 2.891941 TTCAATAGCAGCCCAGCCCG 62.892 60.000 0.00 0.00 34.23 6.13
45 46 3.089874 AATAGCAGCCCAGCCCGA 61.090 61.111 0.00 0.00 34.23 5.14
46 47 2.455565 AATAGCAGCCCAGCCCGAT 61.456 57.895 0.00 0.00 34.23 4.18
47 48 1.127567 AATAGCAGCCCAGCCCGATA 61.128 55.000 0.00 0.00 34.23 2.92
48 49 0.911525 ATAGCAGCCCAGCCCGATAT 60.912 55.000 0.00 0.00 34.23 1.63
49 50 0.252057 TAGCAGCCCAGCCCGATATA 60.252 55.000 0.00 0.00 34.23 0.86
50 51 1.376037 GCAGCCCAGCCCGATATAC 60.376 63.158 0.00 0.00 0.00 1.47
51 52 1.831652 GCAGCCCAGCCCGATATACT 61.832 60.000 0.00 0.00 0.00 2.12
52 53 1.557099 CAGCCCAGCCCGATATACTA 58.443 55.000 0.00 0.00 0.00 1.82
53 54 1.899814 CAGCCCAGCCCGATATACTAA 59.100 52.381 0.00 0.00 0.00 2.24
54 55 2.501723 CAGCCCAGCCCGATATACTAAT 59.498 50.000 0.00 0.00 0.00 1.73
55 56 3.704566 CAGCCCAGCCCGATATACTAATA 59.295 47.826 0.00 0.00 0.00 0.98
56 57 3.705072 AGCCCAGCCCGATATACTAATAC 59.295 47.826 0.00 0.00 0.00 1.89
57 58 3.181468 GCCCAGCCCGATATACTAATACC 60.181 52.174 0.00 0.00 0.00 2.73
58 59 4.028131 CCCAGCCCGATATACTAATACCA 58.972 47.826 0.00 0.00 0.00 3.25
59 60 4.654262 CCCAGCCCGATATACTAATACCAT 59.346 45.833 0.00 0.00 0.00 3.55
60 61 5.130477 CCCAGCCCGATATACTAATACCATT 59.870 44.000 0.00 0.00 0.00 3.16
61 62 6.049149 CCAGCCCGATATACTAATACCATTG 58.951 44.000 0.00 0.00 0.00 2.82
62 63 6.127168 CCAGCCCGATATACTAATACCATTGA 60.127 42.308 0.00 0.00 0.00 2.57
63 64 6.980978 CAGCCCGATATACTAATACCATTGAG 59.019 42.308 0.00 0.00 0.00 3.02
64 65 5.753921 GCCCGATATACTAATACCATTGAGC 59.246 44.000 0.00 0.00 0.00 4.26
65 66 6.629515 GCCCGATATACTAATACCATTGAGCA 60.630 42.308 0.00 0.00 0.00 4.26
66 67 7.327975 CCCGATATACTAATACCATTGAGCAA 58.672 38.462 0.00 0.00 0.00 3.91
67 68 7.987458 CCCGATATACTAATACCATTGAGCAAT 59.013 37.037 0.00 0.00 0.00 3.56
68 69 9.383519 CCGATATACTAATACCATTGAGCAATT 57.616 33.333 0.00 0.00 0.00 2.32
75 76 9.995003 ACTAATACCATTGAGCAATTTGAAAAA 57.005 25.926 0.00 0.00 0.00 1.94
77 78 5.678132 ACCATTGAGCAATTTGAAAAAGC 57.322 34.783 0.00 0.00 0.00 3.51
78 79 5.370679 ACCATTGAGCAATTTGAAAAAGCT 58.629 33.333 7.10 7.10 36.47 3.74
79 80 5.467735 ACCATTGAGCAATTTGAAAAAGCTC 59.532 36.000 20.84 20.84 43.97 4.09
80 81 5.389098 CCATTGAGCAATTTGAAAAAGCTCG 60.389 40.000 21.60 12.47 45.32 5.03
81 82 4.566545 TGAGCAATTTGAAAAAGCTCGA 57.433 36.364 21.60 12.89 45.32 4.04
82 83 4.930963 TGAGCAATTTGAAAAAGCTCGAA 58.069 34.783 21.60 9.38 45.32 3.71
83 84 5.531634 TGAGCAATTTGAAAAAGCTCGAAT 58.468 33.333 21.60 0.37 45.32 3.34
84 85 5.984926 TGAGCAATTTGAAAAAGCTCGAATT 59.015 32.000 21.60 5.65 45.32 2.17
85 86 6.144402 TGAGCAATTTGAAAAAGCTCGAATTC 59.856 34.615 21.60 0.00 45.32 2.17
86 87 5.984926 AGCAATTTGAAAAAGCTCGAATTCA 59.015 32.000 6.22 0.00 37.33 2.57
87 88 6.479660 AGCAATTTGAAAAAGCTCGAATTCAA 59.520 30.769 6.22 10.36 37.33 2.69
88 89 7.172019 AGCAATTTGAAAAAGCTCGAATTCAAT 59.828 29.630 6.22 2.37 40.36 2.57
89 90 7.799914 GCAATTTGAAAAAGCTCGAATTCAATT 59.200 29.630 6.22 9.41 40.36 2.32
92 93 8.864069 TTTGAAAAAGCTCGAATTCAATTACA 57.136 26.923 6.22 1.60 40.36 2.41
93 94 8.506140 TTGAAAAAGCTCGAATTCAATTACAG 57.494 30.769 6.22 0.00 36.99 2.74
94 95 7.870826 TGAAAAAGCTCGAATTCAATTACAGA 58.129 30.769 6.22 0.00 0.00 3.41
95 96 8.349245 TGAAAAAGCTCGAATTCAATTACAGAA 58.651 29.630 6.22 0.00 0.00 3.02
96 97 9.180678 GAAAAAGCTCGAATTCAATTACAGAAA 57.819 29.630 6.22 0.00 0.00 2.52
97 98 8.733857 AAAAGCTCGAATTCAATTACAGAAAG 57.266 30.769 6.22 0.00 0.00 2.62
98 99 7.440523 AAGCTCGAATTCAATTACAGAAAGT 57.559 32.000 6.22 0.00 0.00 2.66
99 100 7.066374 AGCTCGAATTCAATTACAGAAAGTC 57.934 36.000 6.22 0.00 0.00 3.01
100 101 6.650807 AGCTCGAATTCAATTACAGAAAGTCA 59.349 34.615 6.22 0.00 0.00 3.41
101 102 7.173218 AGCTCGAATTCAATTACAGAAAGTCAA 59.827 33.333 6.22 0.00 0.00 3.18
102 103 7.803189 GCTCGAATTCAATTACAGAAAGTCAAA 59.197 33.333 6.22 0.00 0.00 2.69
103 104 9.107367 CTCGAATTCAATTACAGAAAGTCAAAC 57.893 33.333 6.22 0.00 0.00 2.93
104 105 8.836413 TCGAATTCAATTACAGAAAGTCAAACT 58.164 29.630 6.22 0.00 0.00 2.66
105 106 9.450807 CGAATTCAATTACAGAAAGTCAAACTT 57.549 29.630 6.22 0.00 40.80 2.66
107 108 7.985634 TTCAATTACAGAAAGTCAAACTTGC 57.014 32.000 0.00 0.00 38.66 4.01
108 109 7.094508 TCAATTACAGAAAGTCAAACTTGCA 57.905 32.000 0.86 0.00 38.66 4.08
109 110 7.715657 TCAATTACAGAAAGTCAAACTTGCAT 58.284 30.769 0.86 0.00 38.66 3.96
110 111 7.648908 TCAATTACAGAAAGTCAAACTTGCATG 59.351 33.333 0.86 0.00 38.66 4.06
111 112 6.691754 TTACAGAAAGTCAAACTTGCATGA 57.308 33.333 6.60 0.00 38.66 3.07
112 113 5.581126 ACAGAAAGTCAAACTTGCATGAA 57.419 34.783 6.60 0.00 38.66 2.57
113 114 5.964758 ACAGAAAGTCAAACTTGCATGAAA 58.035 33.333 6.60 0.00 38.66 2.69
114 115 6.397272 ACAGAAAGTCAAACTTGCATGAAAA 58.603 32.000 6.60 0.00 38.66 2.29
115 116 6.532657 ACAGAAAGTCAAACTTGCATGAAAAG 59.467 34.615 6.60 1.58 38.66 2.27
116 117 6.753279 CAGAAAGTCAAACTTGCATGAAAAGA 59.247 34.615 13.71 0.00 38.66 2.52
117 118 6.753744 AGAAAGTCAAACTTGCATGAAAAGAC 59.246 34.615 13.71 8.41 38.66 3.01
118 119 5.581126 AGTCAAACTTGCATGAAAAGACA 57.419 34.783 13.71 0.00 0.00 3.41
119 120 5.343249 AGTCAAACTTGCATGAAAAGACAC 58.657 37.500 13.71 6.01 0.00 3.67
120 121 4.504097 GTCAAACTTGCATGAAAAGACACC 59.496 41.667 13.71 0.00 0.00 4.16
121 122 3.354089 AACTTGCATGAAAAGACACCG 57.646 42.857 13.71 0.00 0.00 4.94
122 123 1.001378 ACTTGCATGAAAAGACACCGC 60.001 47.619 13.71 0.00 0.00 5.68
123 124 1.267806 CTTGCATGAAAAGACACCGCT 59.732 47.619 0.00 0.00 0.00 5.52
124 125 2.177394 TGCATGAAAAGACACCGCTA 57.823 45.000 0.00 0.00 0.00 4.26
125 126 2.076100 TGCATGAAAAGACACCGCTAG 58.924 47.619 0.00 0.00 0.00 3.42
126 127 2.289382 TGCATGAAAAGACACCGCTAGA 60.289 45.455 0.00 0.00 0.00 2.43
127 128 2.742053 GCATGAAAAGACACCGCTAGAA 59.258 45.455 0.00 0.00 0.00 2.10
128 129 3.424962 GCATGAAAAGACACCGCTAGAAC 60.425 47.826 0.00 0.00 0.00 3.01
129 130 3.462483 TGAAAAGACACCGCTAGAACA 57.538 42.857 0.00 0.00 0.00 3.18
130 131 4.002906 TGAAAAGACACCGCTAGAACAT 57.997 40.909 0.00 0.00 0.00 2.71
131 132 4.385825 TGAAAAGACACCGCTAGAACATT 58.614 39.130 0.00 0.00 0.00 2.71
132 133 5.543714 TGAAAAGACACCGCTAGAACATTA 58.456 37.500 0.00 0.00 0.00 1.90
133 134 6.170506 TGAAAAGACACCGCTAGAACATTAT 58.829 36.000 0.00 0.00 0.00 1.28
134 135 6.653320 TGAAAAGACACCGCTAGAACATTATT 59.347 34.615 0.00 0.00 0.00 1.40
135 136 7.820386 TGAAAAGACACCGCTAGAACATTATTA 59.180 33.333 0.00 0.00 0.00 0.98
136 137 8.556213 AAAAGACACCGCTAGAACATTATTAA 57.444 30.769 0.00 0.00 0.00 1.40
137 138 7.772332 AAGACACCGCTAGAACATTATTAAG 57.228 36.000 0.00 0.00 0.00 1.85
138 139 7.108841 AGACACCGCTAGAACATTATTAAGA 57.891 36.000 0.00 0.00 0.00 2.10
139 140 6.979238 AGACACCGCTAGAACATTATTAAGAC 59.021 38.462 0.00 0.00 0.00 3.01
140 141 6.875076 ACACCGCTAGAACATTATTAAGACT 58.125 36.000 0.00 0.00 0.00 3.24
141 142 6.979238 ACACCGCTAGAACATTATTAAGACTC 59.021 38.462 0.00 0.00 0.00 3.36
142 143 6.978659 CACCGCTAGAACATTATTAAGACTCA 59.021 38.462 0.00 0.00 0.00 3.41
143 144 7.491372 CACCGCTAGAACATTATTAAGACTCAA 59.509 37.037 0.00 0.00 0.00 3.02
144 145 7.707035 ACCGCTAGAACATTATTAAGACTCAAG 59.293 37.037 0.00 0.00 0.00 3.02
145 146 7.707035 CCGCTAGAACATTATTAAGACTCAAGT 59.293 37.037 0.00 0.00 0.00 3.16
146 147 8.747666 CGCTAGAACATTATTAAGACTCAAGTC 58.252 37.037 1.79 1.79 45.08 3.01
160 161 6.545504 GACTCAAGTCAATGTAGAAAAGCA 57.454 37.500 5.28 0.00 44.18 3.91
161 162 7.138692 GACTCAAGTCAATGTAGAAAAGCAT 57.861 36.000 5.28 0.00 44.18 3.79
162 163 8.256611 GACTCAAGTCAATGTAGAAAAGCATA 57.743 34.615 5.28 0.00 44.18 3.14
163 164 8.621532 ACTCAAGTCAATGTAGAAAAGCATAA 57.378 30.769 0.00 0.00 0.00 1.90
164 165 9.236006 ACTCAAGTCAATGTAGAAAAGCATAAT 57.764 29.630 0.00 0.00 0.00 1.28
165 166 9.499585 CTCAAGTCAATGTAGAAAAGCATAATG 57.500 33.333 0.00 0.00 0.00 1.90
166 167 9.230122 TCAAGTCAATGTAGAAAAGCATAATGA 57.770 29.630 0.00 0.00 0.00 2.57
167 168 9.844790 CAAGTCAATGTAGAAAAGCATAATGAA 57.155 29.630 0.00 0.00 0.00 2.57
169 170 9.846248 AGTCAATGTAGAAAAGCATAATGAAAC 57.154 29.630 0.00 0.00 0.00 2.78
170 171 9.624697 GTCAATGTAGAAAAGCATAATGAAACA 57.375 29.630 0.00 0.00 0.00 2.83
175 176 9.283768 TGTAGAAAAGCATAATGAAACAAGAGA 57.716 29.630 0.00 0.00 0.00 3.10
190 191 9.890629 TGAAACAAGAGATACTAATAACATGCT 57.109 29.630 0.00 0.00 0.00 3.79
221 222 7.707774 AAATTATTCCCACAAGTGAAAAACG 57.292 32.000 0.94 0.00 0.00 3.60
222 223 3.726291 ATTCCCACAAGTGAAAAACGG 57.274 42.857 0.94 0.00 0.00 4.44
223 224 2.131776 TCCCACAAGTGAAAAACGGT 57.868 45.000 0.94 0.00 0.00 4.83
224 225 1.746220 TCCCACAAGTGAAAAACGGTG 59.254 47.619 0.94 0.00 38.16 4.94
225 226 1.555477 CCACAAGTGAAAAACGGTGC 58.445 50.000 0.94 0.00 37.53 5.01
226 227 1.135257 CCACAAGTGAAAAACGGTGCA 60.135 47.619 0.94 0.00 37.53 4.57
227 228 2.184448 CACAAGTGAAAAACGGTGCAG 58.816 47.619 0.00 0.00 33.97 4.41
228 229 1.199624 CAAGTGAAAAACGGTGCAGC 58.800 50.000 5.64 5.64 0.00 5.25
229 230 0.248458 AAGTGAAAAACGGTGCAGCG 60.248 50.000 34.46 34.46 0.00 5.18
230 231 1.092921 AGTGAAAAACGGTGCAGCGA 61.093 50.000 41.29 17.95 0.00 4.93
231 232 0.248296 GTGAAAAACGGTGCAGCGAA 60.248 50.000 41.29 17.64 0.00 4.70
232 233 0.028770 TGAAAAACGGTGCAGCGAAG 59.971 50.000 41.29 16.27 0.00 3.79
248 249 4.735132 AGCGCGCGTTTGCCTCTA 62.735 61.111 32.35 0.00 38.08 2.43
249 250 4.210304 GCGCGCGTTTGCCTCTAG 62.210 66.667 32.35 0.00 38.08 2.43
250 251 2.809601 CGCGCGTTTGCCTCTAGT 60.810 61.111 24.19 0.00 38.08 2.57
251 252 2.778679 GCGCGTTTGCCTCTAGTG 59.221 61.111 8.43 0.00 38.08 2.74
252 253 2.740714 GCGCGTTTGCCTCTAGTGG 61.741 63.158 8.43 6.47 38.08 4.00
253 254 1.374252 CGCGTTTGCCTCTAGTGGT 60.374 57.895 12.31 0.00 38.08 4.16
254 255 0.949105 CGCGTTTGCCTCTAGTGGTT 60.949 55.000 12.31 0.00 38.08 3.67
255 256 1.235724 GCGTTTGCCTCTAGTGGTTT 58.764 50.000 12.31 0.00 33.98 3.27
256 257 1.197036 GCGTTTGCCTCTAGTGGTTTC 59.803 52.381 12.31 0.00 33.98 2.78
257 258 2.767505 CGTTTGCCTCTAGTGGTTTCT 58.232 47.619 12.31 0.00 0.00 2.52
258 259 3.863400 GCGTTTGCCTCTAGTGGTTTCTA 60.863 47.826 12.31 0.00 33.98 2.10
259 260 4.312443 CGTTTGCCTCTAGTGGTTTCTAA 58.688 43.478 12.31 0.00 0.00 2.10
260 261 4.389077 CGTTTGCCTCTAGTGGTTTCTAAG 59.611 45.833 12.31 0.00 0.00 2.18
261 262 3.611766 TGCCTCTAGTGGTTTCTAAGC 57.388 47.619 12.31 0.00 0.00 3.09
262 263 2.903784 TGCCTCTAGTGGTTTCTAAGCA 59.096 45.455 12.31 0.00 36.38 3.91
263 264 3.519510 TGCCTCTAGTGGTTTCTAAGCAT 59.480 43.478 12.31 0.00 41.44 3.79
264 265 3.873952 GCCTCTAGTGGTTTCTAAGCATG 59.126 47.826 12.31 0.00 41.44 4.06
265 266 3.873952 CCTCTAGTGGTTTCTAAGCATGC 59.126 47.826 10.51 10.51 41.44 4.06
266 267 3.521560 TCTAGTGGTTTCTAAGCATGCG 58.478 45.455 13.01 0.00 41.44 4.73
267 268 2.472695 AGTGGTTTCTAAGCATGCGA 57.527 45.000 13.01 3.36 41.44 5.10
268 269 2.778299 AGTGGTTTCTAAGCATGCGAA 58.222 42.857 13.01 7.24 41.44 4.70
269 270 2.744202 AGTGGTTTCTAAGCATGCGAAG 59.256 45.455 13.01 13.70 41.44 3.79
270 271 2.742053 GTGGTTTCTAAGCATGCGAAGA 59.258 45.455 17.76 17.76 41.44 2.87
271 272 3.002791 TGGTTTCTAAGCATGCGAAGAG 58.997 45.455 19.84 12.90 33.29 2.85
272 273 2.352960 GGTTTCTAAGCATGCGAAGAGG 59.647 50.000 19.84 7.26 0.00 3.69
273 274 2.315925 TTCTAAGCATGCGAAGAGGG 57.684 50.000 19.84 6.39 0.00 4.30
274 275 0.179073 TCTAAGCATGCGAAGAGGGC 60.179 55.000 17.76 0.00 0.00 5.19
275 276 0.179062 CTAAGCATGCGAAGAGGGCT 60.179 55.000 13.01 0.00 36.13 5.19
276 277 0.179073 TAAGCATGCGAAGAGGGCTC 60.179 55.000 13.01 0.00 32.84 4.70
277 278 3.267860 GCATGCGAAGAGGGCTCG 61.268 66.667 0.00 0.00 34.09 5.03
278 279 2.587194 CATGCGAAGAGGGCTCGG 60.587 66.667 0.00 0.00 34.09 4.63
279 280 4.537433 ATGCGAAGAGGGCTCGGC 62.537 66.667 0.00 0.00 34.09 5.54
315 316 1.559219 TCAGGGATTCTTCGGCATTCA 59.441 47.619 0.00 0.00 0.00 2.57
352 353 4.444838 ACGCGCTATCAACGGGCA 62.445 61.111 5.73 0.00 46.18 5.36
360 361 3.632189 GCTATCAACGGGCAAATGATTC 58.368 45.455 3.94 0.00 35.53 2.52
371 372 3.118884 GGCAAATGATTCCAGTCAGCATT 60.119 43.478 0.00 0.00 0.00 3.56
393 394 1.480219 GCCGCTACGTCAAGGAATCG 61.480 60.000 0.00 0.00 0.00 3.34
429 430 3.481009 GTGACTCACTCACCGACAG 57.519 57.895 1.58 0.00 43.35 3.51
430 431 0.039074 GTGACTCACTCACCGACAGG 60.039 60.000 1.58 0.00 43.35 4.00
431 432 0.179001 TGACTCACTCACCGACAGGA 60.179 55.000 0.00 0.00 41.02 3.86
432 433 1.178276 GACTCACTCACCGACAGGAT 58.822 55.000 0.00 0.00 41.02 3.24
433 434 0.891373 ACTCACTCACCGACAGGATG 59.109 55.000 0.00 0.00 46.00 3.51
434 435 0.174389 CTCACTCACCGACAGGATGG 59.826 60.000 0.00 0.00 43.62 3.51
435 436 1.448540 CACTCACCGACAGGATGGC 60.449 63.158 0.00 0.00 44.64 4.40
443 444 3.640407 ACAGGATGGCACGCTGGT 61.640 61.111 0.00 0.00 43.62 4.00
444 445 2.821366 CAGGATGGCACGCTGGTC 60.821 66.667 0.00 0.00 0.00 4.02
445 446 4.457496 AGGATGGCACGCTGGTCG 62.457 66.667 0.00 0.00 45.38 4.79
452 453 3.071459 GCACGCTGGTCGATTCACG 62.071 63.158 0.00 0.00 41.67 4.35
467 468 1.004560 CACGTGTGAGACCTGGCAT 60.005 57.895 7.58 0.00 0.00 4.40
481 482 4.553678 ACCTGGCATACTACCTTAGCTAA 58.446 43.478 5.94 5.94 0.00 3.09
482 483 4.589374 ACCTGGCATACTACCTTAGCTAAG 59.411 45.833 24.11 24.11 0.00 2.18
495 503 0.608640 AGCTAAGGACGGTCAAGGTG 59.391 55.000 10.76 0.00 0.00 4.00
526 534 3.868757 TCTAGTACGACAGCAAGCAAT 57.131 42.857 0.00 0.00 0.00 3.56
589 600 3.524095 TCCAAAGCCAGGAAATGAAGA 57.476 42.857 0.00 0.00 30.71 2.87
598 609 4.637977 GCCAGGAAATGAAGAGGAAACTAG 59.362 45.833 0.00 0.00 44.43 2.57
601 612 3.623510 GGAAATGAAGAGGAAACTAGGCG 59.376 47.826 0.00 0.00 44.43 5.52
602 613 2.990066 ATGAAGAGGAAACTAGGCGG 57.010 50.000 0.00 0.00 44.43 6.13
603 614 1.933021 TGAAGAGGAAACTAGGCGGA 58.067 50.000 0.00 0.00 44.43 5.54
604 615 1.825474 TGAAGAGGAAACTAGGCGGAG 59.175 52.381 0.00 0.00 44.43 4.63
605 616 2.100989 GAAGAGGAAACTAGGCGGAGA 58.899 52.381 0.00 0.00 44.43 3.71
606 617 1.770294 AGAGGAAACTAGGCGGAGAG 58.230 55.000 0.00 0.00 44.43 3.20
607 618 1.006162 AGAGGAAACTAGGCGGAGAGT 59.994 52.381 0.00 0.00 44.43 3.24
608 619 1.135333 GAGGAAACTAGGCGGAGAGTG 59.865 57.143 0.00 0.00 44.43 3.51
609 620 0.175989 GGAAACTAGGCGGAGAGTGG 59.824 60.000 0.00 0.00 0.00 4.00
610 621 0.896226 GAAACTAGGCGGAGAGTGGT 59.104 55.000 0.00 0.00 0.00 4.16
611 622 0.608640 AAACTAGGCGGAGAGTGGTG 59.391 55.000 0.00 0.00 0.00 4.17
612 623 1.889530 AACTAGGCGGAGAGTGGTGC 61.890 60.000 0.00 0.00 0.00 5.01
613 624 2.283604 TAGGCGGAGAGTGGTGCA 60.284 61.111 0.00 0.00 0.00 4.57
614 625 1.888436 CTAGGCGGAGAGTGGTGCAA 61.888 60.000 0.00 0.00 0.00 4.08
615 626 2.167398 TAGGCGGAGAGTGGTGCAAC 62.167 60.000 0.00 0.00 0.00 4.17
616 627 2.280797 GCGGAGAGTGGTGCAACA 60.281 61.111 0.00 0.00 39.98 3.33
617 628 2.320587 GCGGAGAGTGGTGCAACAG 61.321 63.158 3.59 0.00 39.98 3.16
618 629 1.669115 CGGAGAGTGGTGCAACAGG 60.669 63.158 3.59 0.00 39.98 4.00
619 630 1.754745 GGAGAGTGGTGCAACAGGA 59.245 57.895 3.59 0.00 39.98 3.86
620 631 0.603975 GGAGAGTGGTGCAACAGGAC 60.604 60.000 3.59 0.00 39.98 3.85
621 632 0.946221 GAGAGTGGTGCAACAGGACG 60.946 60.000 3.59 0.00 39.98 4.79
622 633 2.591715 AGTGGTGCAACAGGACGC 60.592 61.111 3.59 0.00 39.98 5.19
623 634 2.899838 GTGGTGCAACAGGACGCA 60.900 61.111 3.59 0.00 39.98 5.24
658 669 1.864711 CACCGACACAATCAAGAACGT 59.135 47.619 0.00 0.00 0.00 3.99
674 685 2.433318 GTGCGTGCTCTCCTGGAC 60.433 66.667 0.00 0.00 0.00 4.02
675 686 2.917227 TGCGTGCTCTCCTGGACA 60.917 61.111 0.00 0.00 0.00 4.02
676 687 2.125753 GCGTGCTCTCCTGGACAG 60.126 66.667 0.00 0.00 0.00 3.51
677 688 2.125753 CGTGCTCTCCTGGACAGC 60.126 66.667 16.07 16.07 0.00 4.40
678 689 2.267324 GTGCTCTCCTGGACAGCC 59.733 66.667 19.43 8.65 0.00 4.85
679 690 2.203832 TGCTCTCCTGGACAGCCA 60.204 61.111 19.43 6.73 43.47 4.75
680 691 1.614525 TGCTCTCCTGGACAGCCAT 60.615 57.895 19.43 0.00 44.91 4.40
681 692 1.153208 GCTCTCCTGGACAGCCATG 60.153 63.158 12.43 0.00 44.91 3.66
682 693 1.908340 GCTCTCCTGGACAGCCATGT 61.908 60.000 12.43 0.00 44.91 3.21
691 702 3.827505 ACAGCCATGTCCAAACACT 57.172 47.368 0.00 0.00 38.48 3.55
692 703 2.949177 ACAGCCATGTCCAAACACTA 57.051 45.000 0.00 0.00 38.48 2.74
693 704 2.783135 ACAGCCATGTCCAAACACTAG 58.217 47.619 0.00 0.00 38.48 2.57
694 705 2.086869 CAGCCATGTCCAAACACTAGG 58.913 52.381 0.00 0.00 38.48 3.02
695 706 1.705186 AGCCATGTCCAAACACTAGGT 59.295 47.619 0.00 0.00 38.48 3.08
696 707 2.108250 AGCCATGTCCAAACACTAGGTT 59.892 45.455 0.00 0.00 42.98 3.50
697 708 2.488153 GCCATGTCCAAACACTAGGTTC 59.512 50.000 0.00 0.00 39.29 3.62
698 709 3.750371 CCATGTCCAAACACTAGGTTCA 58.250 45.455 0.00 0.00 39.29 3.18
699 710 3.502211 CCATGTCCAAACACTAGGTTCAC 59.498 47.826 0.00 0.00 39.29 3.18
700 711 3.916359 TGTCCAAACACTAGGTTCACA 57.084 42.857 0.00 0.00 39.29 3.58
701 712 4.431416 TGTCCAAACACTAGGTTCACAT 57.569 40.909 0.00 0.00 39.29 3.21
702 713 5.554437 TGTCCAAACACTAGGTTCACATA 57.446 39.130 0.00 0.00 39.29 2.29
703 714 6.121776 TGTCCAAACACTAGGTTCACATAT 57.878 37.500 0.00 0.00 39.29 1.78
704 715 5.937540 TGTCCAAACACTAGGTTCACATATG 59.062 40.000 0.00 0.00 39.29 1.78
705 716 5.354234 GTCCAAACACTAGGTTCACATATGG 59.646 44.000 7.80 0.16 39.29 2.74
706 717 4.096382 CCAAACACTAGGTTCACATATGGC 59.904 45.833 7.80 0.00 39.29 4.40
707 718 4.844349 AACACTAGGTTCACATATGGCT 57.156 40.909 7.80 0.00 33.35 4.75
708 719 4.142609 ACACTAGGTTCACATATGGCTG 57.857 45.455 7.80 0.00 0.00 4.85
709 720 2.874701 CACTAGGTTCACATATGGCTGC 59.125 50.000 7.80 0.00 0.00 5.25
710 721 2.774234 ACTAGGTTCACATATGGCTGCT 59.226 45.455 7.80 0.00 0.00 4.24
711 722 2.814805 AGGTTCACATATGGCTGCTT 57.185 45.000 7.80 0.00 0.00 3.91
712 723 2.648059 AGGTTCACATATGGCTGCTTC 58.352 47.619 7.80 0.00 0.00 3.86
713 724 1.678101 GGTTCACATATGGCTGCTTCC 59.322 52.381 7.80 0.00 0.00 3.46
714 725 2.368439 GTTCACATATGGCTGCTTCCA 58.632 47.619 7.80 0.12 40.97 3.53
716 727 2.578786 TCACATATGGCTGCTTCCATG 58.421 47.619 17.04 8.19 45.84 3.66
717 728 2.173143 TCACATATGGCTGCTTCCATGA 59.827 45.455 17.04 7.39 45.84 3.07
718 729 2.552743 CACATATGGCTGCTTCCATGAG 59.447 50.000 17.04 12.39 45.84 2.90
719 730 2.160205 CATATGGCTGCTTCCATGAGG 58.840 52.381 17.04 5.95 45.84 3.86
720 731 0.179009 TATGGCTGCTTCCATGAGGC 60.179 55.000 17.04 0.00 45.84 4.70
721 732 2.044650 GGCTGCTTCCATGAGGCA 60.045 61.111 0.00 0.89 42.16 4.75
722 733 1.455217 GGCTGCTTCCATGAGGCAT 60.455 57.895 1.20 0.00 43.31 4.40
723 734 1.734137 GCTGCTTCCATGAGGCATG 59.266 57.895 1.20 0.00 43.31 4.06
724 735 0.750546 GCTGCTTCCATGAGGCATGA 60.751 55.000 8.87 0.00 43.31 3.07
725 736 1.309950 CTGCTTCCATGAGGCATGAG 58.690 55.000 8.87 1.14 43.31 2.90
726 737 0.750546 TGCTTCCATGAGGCATGAGC 60.751 55.000 8.87 10.58 43.81 4.26
727 738 0.750546 GCTTCCATGAGGCATGAGCA 60.751 55.000 8.87 0.00 43.81 4.26
728 739 1.022735 CTTCCATGAGGCATGAGCAC 58.977 55.000 8.87 0.00 43.81 4.40
729 740 0.745486 TTCCATGAGGCATGAGCACG 60.745 55.000 8.87 0.00 43.81 5.34
730 741 2.184830 CCATGAGGCATGAGCACGG 61.185 63.158 8.87 0.00 43.81 4.94
731 742 2.184830 CATGAGGCATGAGCACGGG 61.185 63.158 0.00 0.00 43.81 5.28
732 743 3.411114 ATGAGGCATGAGCACGGGG 62.411 63.158 0.00 0.00 44.61 5.73
733 744 3.785859 GAGGCATGAGCACGGGGA 61.786 66.667 0.00 0.00 44.61 4.81
734 745 3.329542 GAGGCATGAGCACGGGGAA 62.330 63.158 0.00 0.00 44.61 3.97
735 746 2.825836 GGCATGAGCACGGGGAAG 60.826 66.667 0.00 0.00 44.61 3.46
736 747 3.512516 GCATGAGCACGGGGAAGC 61.513 66.667 0.00 0.00 41.58 3.86
737 748 2.270205 CATGAGCACGGGGAAGCT 59.730 61.111 0.00 0.00 45.25 3.74
738 749 1.377725 CATGAGCACGGGGAAGCTT 60.378 57.895 0.00 0.00 42.04 3.74
739 750 1.377725 ATGAGCACGGGGAAGCTTG 60.378 57.895 2.10 0.00 42.04 4.01
740 751 3.435186 GAGCACGGGGAAGCTTGC 61.435 66.667 9.87 9.87 42.04 4.01
743 754 2.282462 CACGGGGAAGCTTGCCTT 60.282 61.111 32.69 19.34 38.90 4.35
744 755 2.282462 ACGGGGAAGCTTGCCTTG 60.282 61.111 32.69 26.69 38.90 3.61
745 756 3.064324 CGGGGAAGCTTGCCTTGG 61.064 66.667 32.69 19.82 38.90 3.61
746 757 2.681421 GGGGAAGCTTGCCTTGGG 60.681 66.667 32.69 0.00 38.90 4.12
747 758 2.440599 GGGAAGCTTGCCTTGGGA 59.559 61.111 28.21 0.00 35.55 4.37
748 759 1.979155 GGGAAGCTTGCCTTGGGAC 60.979 63.158 28.21 0.91 35.55 4.46
749 760 1.075659 GGAAGCTTGCCTTGGGACT 59.924 57.895 2.10 0.00 32.78 3.85
750 761 0.328258 GGAAGCTTGCCTTGGGACTA 59.672 55.000 2.10 0.00 32.78 2.59
751 762 1.454201 GAAGCTTGCCTTGGGACTAC 58.546 55.000 2.10 0.00 32.78 2.73
770 781 2.281761 AGCACAAGGGACGGCAAG 60.282 61.111 0.00 0.00 0.00 4.01
796 807 1.350193 CGTTCAGACTGGAATGGACG 58.650 55.000 1.81 0.00 41.61 4.79
815 826 2.314647 CGTTCGTCCACACGCCAAT 61.315 57.895 0.00 0.00 46.28 3.16
830 841 3.004524 ACGCCAATCTAGTAATCCGTCTC 59.995 47.826 0.00 0.00 0.00 3.36
853 864 5.922544 TCATGAATCATGATACACAGTAGCG 59.077 40.000 20.85 0.00 44.60 4.26
854 865 5.262588 TGAATCATGATACACAGTAGCGT 57.737 39.130 9.04 0.00 0.00 5.07
855 866 5.660460 TGAATCATGATACACAGTAGCGTT 58.340 37.500 9.04 0.00 0.00 4.84
856 867 5.748630 TGAATCATGATACACAGTAGCGTTC 59.251 40.000 9.04 0.00 0.00 3.95
857 868 4.041740 TCATGATACACAGTAGCGTTCC 57.958 45.455 0.00 0.00 0.00 3.62
858 869 2.554806 TGATACACAGTAGCGTTCCG 57.445 50.000 0.00 0.00 0.00 4.30
859 870 1.133598 TGATACACAGTAGCGTTCCGG 59.866 52.381 0.00 0.00 0.00 5.14
860 871 1.133790 GATACACAGTAGCGTTCCGGT 59.866 52.381 0.00 0.00 41.50 5.28
861 872 0.523072 TACACAGTAGCGTTCCGGTC 59.477 55.000 0.00 0.00 38.83 4.79
862 873 1.800315 CACAGTAGCGTTCCGGTCG 60.800 63.158 15.04 15.04 38.83 4.79
863 874 2.263741 ACAGTAGCGTTCCGGTCGT 61.264 57.895 18.83 10.83 38.83 4.34
864 875 1.800315 CAGTAGCGTTCCGGTCGTG 60.800 63.158 18.83 8.82 38.83 4.35
865 876 2.505557 GTAGCGTTCCGGTCGTGG 60.506 66.667 18.83 1.12 38.83 4.94
866 877 2.985282 TAGCGTTCCGGTCGTGGT 60.985 61.111 18.83 8.97 38.83 4.16
867 878 2.981560 TAGCGTTCCGGTCGTGGTC 61.982 63.158 18.83 6.42 38.83 4.02
869 880 3.980989 CGTTCCGGTCGTGGTCCA 61.981 66.667 0.00 0.00 0.00 4.02
870 881 2.660802 GTTCCGGTCGTGGTCCAT 59.339 61.111 0.00 0.00 0.00 3.41
871 882 1.740296 GTTCCGGTCGTGGTCCATG 60.740 63.158 4.52 4.52 0.00 3.66
872 883 2.211410 TTCCGGTCGTGGTCCATGT 61.211 57.895 10.97 0.00 0.00 3.21
873 884 2.434185 CCGGTCGTGGTCCATGTG 60.434 66.667 10.97 2.89 0.00 3.21
874 885 3.118454 CGGTCGTGGTCCATGTGC 61.118 66.667 10.97 5.58 0.00 4.57
875 886 2.031919 GGTCGTGGTCCATGTGCA 59.968 61.111 10.97 0.00 0.00 4.57
876 887 2.034879 GGTCGTGGTCCATGTGCAG 61.035 63.158 10.97 0.00 0.00 4.41
877 888 1.301716 GTCGTGGTCCATGTGCAGT 60.302 57.895 10.97 0.00 0.00 4.40
878 889 1.005037 TCGTGGTCCATGTGCAGTC 60.005 57.895 10.97 0.00 0.00 3.51
1159 1612 1.452145 TTTCACCTGCGGCTTCAACC 61.452 55.000 0.00 0.00 0.00 3.77
1356 1812 5.409643 ACAATGTGACGTCTTCTTCAAAG 57.590 39.130 17.92 7.60 0.00 2.77
1428 1891 5.345702 CAAGGTGATATCATTTTGTGGCAG 58.654 41.667 9.02 0.00 0.00 4.85
1463 1926 2.693762 CCGACACATTGCTGCCCTG 61.694 63.158 0.00 0.00 0.00 4.45
1578 2041 7.514784 ACTCACATTGTTTGATGATGAGAAA 57.485 32.000 16.70 0.00 37.90 2.52
1699 2169 4.574828 CGGGGTATTTTCTTGGTAGTGATG 59.425 45.833 0.00 0.00 0.00 3.07
1705 2175 9.614792 GGTATTTTCTTGGTAGTGATGACTTAT 57.385 33.333 0.00 0.00 33.21 1.73
1740 2210 1.135068 ATTGGGGTCACGGGGTTACA 61.135 55.000 0.00 0.00 0.00 2.41
1751 2221 4.286549 TCACGGGGTTACAAGGAGATTAAA 59.713 41.667 0.00 0.00 0.00 1.52
1773 2243 5.796424 AATTGGATTATGATGGCAACCTC 57.204 39.130 0.00 0.00 0.00 3.85
2193 2672 0.250124 CGGCTGTTAGTGGTGGTTCA 60.250 55.000 0.00 0.00 0.00 3.18
2196 2675 3.681593 GGCTGTTAGTGGTGGTTCAATA 58.318 45.455 0.00 0.00 0.00 1.90
2352 2831 3.141398 GAGCAGTCAAAGTGGATCACAA 58.859 45.455 0.00 0.00 36.74 3.33
2370 2849 9.378551 GGATCACAATCACAATACTTGTACTTA 57.621 33.333 0.00 0.00 43.23 2.24
2809 3288 8.885494 TGGTTCTTTGGATAAAATCTTGTTTG 57.115 30.769 0.00 0.00 0.00 2.93
2827 3315 6.930667 TGTTTGGTAGTGAAAGGTTACTTC 57.069 37.500 0.00 0.00 35.41 3.01
2851 3339 5.240844 CGGTGGAGTGAAAGGTTTAAGATTT 59.759 40.000 0.00 0.00 0.00 2.17
2947 3435 9.639563 TCAAGCCTGAAAATATATTGTTGGATA 57.360 29.630 10.91 0.00 0.00 2.59
3114 3602 2.826128 TGATGTCTACAGCTTCGGAGTT 59.174 45.455 0.00 0.00 32.67 3.01
3141 3629 1.694696 CTAGAACTACTCATGGGGGCC 59.305 57.143 0.00 0.00 0.00 5.80
3218 3706 2.202566 GGTCGTTAGGATGCTTACAGC 58.797 52.381 4.25 0.00 42.82 4.40
3321 3843 2.918131 GCAAGCAAGAACGATGGTCAAC 60.918 50.000 0.00 0.00 0.00 3.18
3366 3888 1.804748 GACAGTAGAAAAAGGCCCACG 59.195 52.381 0.00 0.00 0.00 4.94
3375 3897 0.966179 AAAGGCCCACGATGGAAAAC 59.034 50.000 0.00 0.00 40.96 2.43
3558 4103 7.540299 TGTCATTGTCATCGTAGTTGTATACA 58.460 34.615 0.08 0.08 0.00 2.29
3718 4266 3.679389 AGTCACTAGAAAATGCTGTGGG 58.321 45.455 0.00 0.00 0.00 4.61
3801 4350 3.194005 TCGGTTGCAGAAAAAGAGACT 57.806 42.857 0.00 0.00 0.00 3.24
3926 4475 8.040716 AGTGTTCAAGTACTAATATTTGTGCC 57.959 34.615 12.08 3.77 31.62 5.01
3937 4486 7.835822 ACTAATATTTGTGCCAAAGTTATGCA 58.164 30.769 1.55 0.00 0.00 3.96
3940 4489 3.383620 TTGTGCCAAAGTTATGCAAGG 57.616 42.857 0.00 0.00 36.65 3.61
4007 4557 8.934507 AAGTCTTCAATTAGCACTACTGATAC 57.065 34.615 0.00 0.00 0.00 2.24
4162 5042 3.430929 CCTTTGGAGTACTATCGCTGCTT 60.431 47.826 0.00 0.00 0.00 3.91
4167 5047 2.619177 GAGTACTATCGCTGCTTCTCCA 59.381 50.000 0.00 0.00 0.00 3.86
4173 5053 1.817099 CGCTGCTTCTCCATCCCAC 60.817 63.158 0.00 0.00 0.00 4.61
4222 5102 7.161404 GGCATGATTCTGTGTTATCCACTATA 58.839 38.462 0.00 0.00 44.81 1.31
4254 5134 7.792374 ATATATTGGTGCTATGATAAAGGCG 57.208 36.000 0.00 0.00 0.00 5.52
4255 5135 3.275617 TTGGTGCTATGATAAAGGCGT 57.724 42.857 0.00 0.00 0.00 5.68
4256 5136 3.275617 TGGTGCTATGATAAAGGCGTT 57.724 42.857 0.00 0.00 0.00 4.84
4257 5137 3.616219 TGGTGCTATGATAAAGGCGTTT 58.384 40.909 9.63 9.63 0.00 3.60
4258 5138 4.013728 TGGTGCTATGATAAAGGCGTTTT 58.986 39.130 10.01 0.00 0.00 2.43
4259 5139 4.095782 TGGTGCTATGATAAAGGCGTTTTC 59.904 41.667 10.01 8.10 0.00 2.29
4260 5140 4.095782 GGTGCTATGATAAAGGCGTTTTCA 59.904 41.667 10.01 12.90 0.00 2.69
4261 5141 5.221048 GGTGCTATGATAAAGGCGTTTTCAT 60.221 40.000 18.96 18.96 32.69 2.57
4262 5142 5.909610 GTGCTATGATAAAGGCGTTTTCATC 59.090 40.000 18.65 15.45 31.53 2.92
4263 5143 5.008613 TGCTATGATAAAGGCGTTTTCATCC 59.991 40.000 18.65 13.08 31.53 3.51
4264 5144 4.552166 ATGATAAAGGCGTTTTCATCCG 57.448 40.909 10.01 0.00 0.00 4.18
4269 5149 4.036544 GCGTTTTCATCCGCGTTC 57.963 55.556 4.92 0.00 40.56 3.95
4270 5150 1.511254 GCGTTTTCATCCGCGTTCC 60.511 57.895 4.92 0.00 40.56 3.62
4271 5151 1.863491 CGTTTTCATCCGCGTTCCA 59.137 52.632 4.92 0.00 0.00 3.53
4272 5152 0.446222 CGTTTTCATCCGCGTTCCAT 59.554 50.000 4.92 0.00 0.00 3.41
4273 5153 1.135803 CGTTTTCATCCGCGTTCCATT 60.136 47.619 4.92 0.00 0.00 3.16
4274 5154 2.515912 GTTTTCATCCGCGTTCCATTC 58.484 47.619 4.92 0.00 0.00 2.67
4275 5155 1.814793 TTTCATCCGCGTTCCATTCA 58.185 45.000 4.92 0.00 0.00 2.57
4276 5156 1.083489 TTCATCCGCGTTCCATTCAC 58.917 50.000 4.92 0.00 0.00 3.18
4277 5157 0.036858 TCATCCGCGTTCCATTCACA 60.037 50.000 4.92 0.00 0.00 3.58
4278 5158 0.374758 CATCCGCGTTCCATTCACAG 59.625 55.000 4.92 0.00 0.00 3.66
4279 5159 1.369091 ATCCGCGTTCCATTCACAGC 61.369 55.000 4.92 0.00 0.00 4.40
4280 5160 2.096406 CGCGTTCCATTCACAGCG 59.904 61.111 0.00 0.00 41.56 5.18
4281 5161 2.202349 GCGTTCCATTCACAGCGC 60.202 61.111 0.00 0.00 38.15 5.92
4282 5162 2.096406 CGTTCCATTCACAGCGCG 59.904 61.111 0.00 0.00 0.00 6.86
4283 5163 2.379634 CGTTCCATTCACAGCGCGA 61.380 57.895 12.10 0.00 0.00 5.87
4284 5164 1.866237 GTTCCATTCACAGCGCGAA 59.134 52.632 12.10 0.00 0.00 4.70
4285 5165 0.447801 GTTCCATTCACAGCGCGAAT 59.552 50.000 12.10 1.98 33.33 3.34
4286 5166 0.726827 TTCCATTCACAGCGCGAATC 59.273 50.000 12.10 0.00 30.65 2.52
4287 5167 1.011904 CCATTCACAGCGCGAATCG 60.012 57.895 12.10 0.00 42.12 3.34
4306 5186 4.838486 GTCCGTCCGCTCTCGCAG 62.838 72.222 0.00 0.00 35.30 5.18
4310 5190 3.532155 GTCCGCTCTCGCAGGGAT 61.532 66.667 0.53 0.00 37.22 3.85
4311 5191 3.219928 TCCGCTCTCGCAGGGATC 61.220 66.667 0.53 0.00 37.22 3.36
4312 5192 4.292178 CCGCTCTCGCAGGGATCC 62.292 72.222 1.92 1.92 37.22 3.36
4313 5193 3.531207 CGCTCTCGCAGGGATCCA 61.531 66.667 15.23 0.00 37.22 3.41
4314 5194 2.865598 CGCTCTCGCAGGGATCCAT 61.866 63.158 15.23 2.55 37.22 3.41
4315 5195 1.301558 GCTCTCGCAGGGATCCATG 60.302 63.158 22.10 22.10 35.78 3.66
4316 5196 1.301558 CTCTCGCAGGGATCCATGC 60.302 63.158 35.76 35.76 39.09 4.06
4317 5197 2.281345 CTCGCAGGGATCCATGCC 60.281 66.667 37.89 23.59 39.30 4.40
4318 5198 4.240103 TCGCAGGGATCCATGCCG 62.240 66.667 37.89 31.60 43.87 5.69
4321 5201 3.882326 CAGGGATCCATGCCGGCT 61.882 66.667 29.70 10.60 43.87 5.52
4322 5202 3.882326 AGGGATCCATGCCGGCTG 61.882 66.667 29.70 21.88 43.87 4.85
4323 5203 4.962836 GGGATCCATGCCGGCTGG 62.963 72.222 28.82 28.82 38.77 4.85
4373 5253 1.670791 TTTTTCCGTTTCACTCGGCT 58.329 45.000 0.00 0.00 46.49 5.52
4374 5254 2.529780 TTTTCCGTTTCACTCGGCTA 57.470 45.000 0.00 0.00 46.49 3.93
4375 5255 2.754946 TTTCCGTTTCACTCGGCTAT 57.245 45.000 0.00 0.00 46.49 2.97
4376 5256 3.872511 TTTCCGTTTCACTCGGCTATA 57.127 42.857 0.00 0.00 46.49 1.31
4377 5257 2.857592 TCCGTTTCACTCGGCTATAC 57.142 50.000 0.00 0.00 46.49 1.47
4378 5258 1.064505 TCCGTTTCACTCGGCTATACG 59.935 52.381 0.00 0.00 46.49 3.06
4379 5259 1.474017 CGTTTCACTCGGCTATACGG 58.526 55.000 0.00 0.00 0.00 4.02
4380 5260 1.202222 CGTTTCACTCGGCTATACGGT 60.202 52.381 0.00 0.00 0.00 4.83
4381 5261 2.733227 CGTTTCACTCGGCTATACGGTT 60.733 50.000 0.00 0.00 0.00 4.44
4382 5262 2.572191 TTCACTCGGCTATACGGTTG 57.428 50.000 0.00 0.00 0.00 3.77
4383 5263 0.101759 TCACTCGGCTATACGGTTGC 59.898 55.000 0.00 0.00 0.00 4.17
4384 5264 0.179121 CACTCGGCTATACGGTTGCA 60.179 55.000 0.00 0.00 0.00 4.08
4385 5265 0.533491 ACTCGGCTATACGGTTGCAA 59.467 50.000 0.00 0.00 0.00 4.08
4386 5266 1.138266 ACTCGGCTATACGGTTGCAAT 59.862 47.619 0.59 0.00 0.00 3.56
4387 5267 2.363038 ACTCGGCTATACGGTTGCAATA 59.637 45.455 0.59 0.00 0.00 1.90
4388 5268 2.729882 CTCGGCTATACGGTTGCAATAC 59.270 50.000 0.59 0.00 0.00 1.89
4389 5269 2.101082 TCGGCTATACGGTTGCAATACA 59.899 45.455 0.59 0.00 0.00 2.29
4390 5270 2.475111 CGGCTATACGGTTGCAATACAG 59.525 50.000 0.59 0.00 0.00 2.74
4391 5271 3.463944 GGCTATACGGTTGCAATACAGT 58.536 45.455 0.59 0.31 0.00 3.55
4392 5272 3.493503 GGCTATACGGTTGCAATACAGTC 59.506 47.826 0.59 0.00 0.00 3.51
4393 5273 4.116961 GCTATACGGTTGCAATACAGTCA 58.883 43.478 0.59 0.00 0.00 3.41
4394 5274 4.569162 GCTATACGGTTGCAATACAGTCAA 59.431 41.667 0.59 0.00 0.00 3.18
4395 5275 5.064198 GCTATACGGTTGCAATACAGTCAAA 59.936 40.000 0.59 0.00 0.00 2.69
4396 5276 6.238374 GCTATACGGTTGCAATACAGTCAAAT 60.238 38.462 0.59 0.00 0.00 2.32
4397 5277 4.846779 ACGGTTGCAATACAGTCAAATT 57.153 36.364 0.59 0.00 0.00 1.82
4398 5278 4.545610 ACGGTTGCAATACAGTCAAATTG 58.454 39.130 0.59 0.00 36.40 2.32
4399 5279 4.037446 ACGGTTGCAATACAGTCAAATTGT 59.963 37.500 0.59 0.00 35.86 2.71
4400 5280 5.239744 ACGGTTGCAATACAGTCAAATTGTA 59.760 36.000 0.59 0.00 35.86 2.41
4401 5281 6.072175 ACGGTTGCAATACAGTCAAATTGTAT 60.072 34.615 0.59 0.00 42.06 2.29
4402 5282 6.468956 CGGTTGCAATACAGTCAAATTGTATC 59.531 38.462 0.59 0.00 40.01 2.24
4403 5283 7.538575 GGTTGCAATACAGTCAAATTGTATCT 58.461 34.615 0.59 0.00 40.01 1.98
4404 5284 8.673711 GGTTGCAATACAGTCAAATTGTATCTA 58.326 33.333 0.59 0.00 40.01 1.98
4405 5285 9.490663 GTTGCAATACAGTCAAATTGTATCTAC 57.509 33.333 0.59 0.00 40.01 2.59
4406 5286 9.448438 TTGCAATACAGTCAAATTGTATCTACT 57.552 29.630 0.00 0.00 40.01 2.57
4407 5287 9.448438 TGCAATACAGTCAAATTGTATCTACTT 57.552 29.630 0.00 0.00 40.01 2.24
4422 5302 8.179509 TGTATCTACTTTATTCCTACCTGAGC 57.820 38.462 0.00 0.00 0.00 4.26
4423 5303 5.769484 TCTACTTTATTCCTACCTGAGCG 57.231 43.478 0.00 0.00 0.00 5.03
4424 5304 5.198965 TCTACTTTATTCCTACCTGAGCGT 58.801 41.667 0.00 0.00 0.00 5.07
4425 5305 6.359804 TCTACTTTATTCCTACCTGAGCGTA 58.640 40.000 0.00 0.00 0.00 4.42
4426 5306 5.259832 ACTTTATTCCTACCTGAGCGTAC 57.740 43.478 0.00 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.304559 CGGTATTTGTTCTGAGCGAAGAG 59.695 47.826 0.74 0.00 34.90 2.85
1 2 3.250744 CGGTATTTGTTCTGAGCGAAGA 58.749 45.455 0.74 0.00 34.90 2.87
2 3 2.993899 ACGGTATTTGTTCTGAGCGAAG 59.006 45.455 0.74 0.00 36.67 3.79
3 4 3.034721 ACGGTATTTGTTCTGAGCGAA 57.965 42.857 0.00 0.00 36.67 4.70
4 5 2.736144 ACGGTATTTGTTCTGAGCGA 57.264 45.000 0.00 0.00 36.67 4.93
5 6 3.806316 AAACGGTATTTGTTCTGAGCG 57.194 42.857 0.00 0.00 38.67 5.03
6 7 5.103290 TGAAAACGGTATTTGTTCTGAGC 57.897 39.130 0.00 0.00 0.00 4.26
7 8 7.481798 GCTATTGAAAACGGTATTTGTTCTGAG 59.518 37.037 0.00 0.00 0.00 3.35
8 9 7.041030 TGCTATTGAAAACGGTATTTGTTCTGA 60.041 33.333 0.00 0.00 0.00 3.27
9 10 7.081349 TGCTATTGAAAACGGTATTTGTTCTG 58.919 34.615 0.00 0.00 0.00 3.02
10 11 7.209471 TGCTATTGAAAACGGTATTTGTTCT 57.791 32.000 0.00 0.00 0.00 3.01
11 12 6.033513 GCTGCTATTGAAAACGGTATTTGTTC 59.966 38.462 0.00 0.00 0.00 3.18
12 13 5.861787 GCTGCTATTGAAAACGGTATTTGTT 59.138 36.000 0.00 0.00 0.00 2.83
13 14 5.399013 GCTGCTATTGAAAACGGTATTTGT 58.601 37.500 0.00 0.00 0.00 2.83
14 15 4.798387 GGCTGCTATTGAAAACGGTATTTG 59.202 41.667 0.00 0.00 0.00 2.32
15 16 4.142249 GGGCTGCTATTGAAAACGGTATTT 60.142 41.667 0.00 0.00 0.00 1.40
16 17 3.380320 GGGCTGCTATTGAAAACGGTATT 59.620 43.478 0.00 0.00 0.00 1.89
17 18 2.949644 GGGCTGCTATTGAAAACGGTAT 59.050 45.455 0.00 0.00 0.00 2.73
18 19 2.290387 TGGGCTGCTATTGAAAACGGTA 60.290 45.455 0.00 0.00 0.00 4.02
19 20 1.173913 GGGCTGCTATTGAAAACGGT 58.826 50.000 0.00 0.00 0.00 4.83
20 21 1.133025 CTGGGCTGCTATTGAAAACGG 59.867 52.381 0.00 0.00 0.00 4.44
21 22 1.468054 GCTGGGCTGCTATTGAAAACG 60.468 52.381 0.00 0.00 0.00 3.60
22 23 1.134995 GGCTGGGCTGCTATTGAAAAC 60.135 52.381 0.00 0.00 0.00 2.43
23 24 1.185315 GGCTGGGCTGCTATTGAAAA 58.815 50.000 0.00 0.00 0.00 2.29
24 25 0.684153 GGGCTGGGCTGCTATTGAAA 60.684 55.000 0.00 0.00 0.00 2.69
25 26 1.076777 GGGCTGGGCTGCTATTGAA 60.077 57.895 0.00 0.00 0.00 2.69
26 27 2.597340 GGGCTGGGCTGCTATTGA 59.403 61.111 0.00 0.00 0.00 2.57
27 28 2.687418 ATCGGGCTGGGCTGCTATTG 62.687 60.000 0.00 0.00 0.00 1.90
28 29 1.127567 TATCGGGCTGGGCTGCTATT 61.128 55.000 0.00 0.00 0.00 1.73
29 30 0.911525 ATATCGGGCTGGGCTGCTAT 60.912 55.000 0.00 0.00 0.00 2.97
30 31 0.252057 TATATCGGGCTGGGCTGCTA 60.252 55.000 0.00 0.00 0.00 3.49
31 32 1.536418 TATATCGGGCTGGGCTGCT 60.536 57.895 0.00 0.00 0.00 4.24
32 33 1.376037 GTATATCGGGCTGGGCTGC 60.376 63.158 0.00 0.00 0.00 5.25
33 34 1.557099 TAGTATATCGGGCTGGGCTG 58.443 55.000 0.00 0.00 0.00 4.85
34 35 2.320681 TTAGTATATCGGGCTGGGCT 57.679 50.000 0.00 0.00 0.00 5.19
35 36 3.181468 GGTATTAGTATATCGGGCTGGGC 60.181 52.174 0.00 0.00 0.00 5.36
36 37 4.028131 TGGTATTAGTATATCGGGCTGGG 58.972 47.826 0.00 0.00 0.00 4.45
37 38 5.871396 ATGGTATTAGTATATCGGGCTGG 57.129 43.478 0.00 0.00 0.00 4.85
38 39 6.873997 TCAATGGTATTAGTATATCGGGCTG 58.126 40.000 0.00 0.00 0.00 4.85
39 40 6.407074 GCTCAATGGTATTAGTATATCGGGCT 60.407 42.308 0.00 0.00 0.00 5.19
40 41 5.753921 GCTCAATGGTATTAGTATATCGGGC 59.246 44.000 0.00 0.00 0.00 6.13
41 42 6.873997 TGCTCAATGGTATTAGTATATCGGG 58.126 40.000 0.00 0.00 0.00 5.14
42 43 8.948631 ATTGCTCAATGGTATTAGTATATCGG 57.051 34.615 0.00 0.00 0.00 4.18
49 50 9.995003 TTTTTCAAATTGCTCAATGGTATTAGT 57.005 25.926 0.00 0.00 0.00 2.24
51 52 8.934825 GCTTTTTCAAATTGCTCAATGGTATTA 58.065 29.630 0.00 0.00 0.00 0.98
52 53 7.662669 AGCTTTTTCAAATTGCTCAATGGTATT 59.337 29.630 0.00 0.00 0.00 1.89
53 54 7.163441 AGCTTTTTCAAATTGCTCAATGGTAT 58.837 30.769 0.00 0.00 0.00 2.73
54 55 6.523840 AGCTTTTTCAAATTGCTCAATGGTA 58.476 32.000 0.00 0.00 0.00 3.25
55 56 5.370679 AGCTTTTTCAAATTGCTCAATGGT 58.629 33.333 0.00 0.00 0.00 3.55
56 57 5.923665 GAGCTTTTTCAAATTGCTCAATGG 58.076 37.500 15.78 0.00 46.41 3.16
61 62 6.144402 TGAATTCGAGCTTTTTCAAATTGCTC 59.856 34.615 12.38 12.38 44.49 4.26
62 63 5.984926 TGAATTCGAGCTTTTTCAAATTGCT 59.015 32.000 0.04 0.00 36.63 3.91
63 64 6.214205 TGAATTCGAGCTTTTTCAAATTGC 57.786 33.333 0.04 0.00 0.00 3.56
66 67 9.474920 TGTAATTGAATTCGAGCTTTTTCAAAT 57.525 25.926 14.26 10.60 40.36 2.32
67 68 8.864069 TGTAATTGAATTCGAGCTTTTTCAAA 57.136 26.923 14.26 2.27 40.36 2.69
68 69 8.349245 TCTGTAATTGAATTCGAGCTTTTTCAA 58.651 29.630 13.24 13.24 40.99 2.69
69 70 7.870826 TCTGTAATTGAATTCGAGCTTTTTCA 58.129 30.769 1.10 0.00 0.00 2.69
70 71 8.728088 TTCTGTAATTGAATTCGAGCTTTTTC 57.272 30.769 1.10 0.00 0.00 2.29
71 72 9.185192 CTTTCTGTAATTGAATTCGAGCTTTTT 57.815 29.630 1.10 0.00 0.00 1.94
72 73 8.352942 ACTTTCTGTAATTGAATTCGAGCTTTT 58.647 29.630 1.10 0.00 0.00 2.27
73 74 7.875971 ACTTTCTGTAATTGAATTCGAGCTTT 58.124 30.769 1.10 0.00 0.00 3.51
74 75 7.173218 TGACTTTCTGTAATTGAATTCGAGCTT 59.827 33.333 1.10 0.00 0.00 3.74
75 76 6.650807 TGACTTTCTGTAATTGAATTCGAGCT 59.349 34.615 1.10 0.00 0.00 4.09
76 77 6.831769 TGACTTTCTGTAATTGAATTCGAGC 58.168 36.000 1.10 0.00 0.00 5.03
77 78 9.107367 GTTTGACTTTCTGTAATTGAATTCGAG 57.893 33.333 1.10 0.00 0.00 4.04
78 79 8.836413 AGTTTGACTTTCTGTAATTGAATTCGA 58.164 29.630 0.00 0.00 0.00 3.71
79 80 9.450807 AAGTTTGACTTTCTGTAATTGAATTCG 57.549 29.630 0.04 0.00 34.11 3.34
81 82 9.034544 GCAAGTTTGACTTTCTGTAATTGAATT 57.965 29.630 0.00 0.00 36.03 2.17
82 83 8.196771 TGCAAGTTTGACTTTCTGTAATTGAAT 58.803 29.630 0.00 0.00 36.03 2.57
83 84 7.542890 TGCAAGTTTGACTTTCTGTAATTGAA 58.457 30.769 0.00 0.00 36.03 2.69
84 85 7.094508 TGCAAGTTTGACTTTCTGTAATTGA 57.905 32.000 0.00 0.00 36.03 2.57
85 86 7.648908 TCATGCAAGTTTGACTTTCTGTAATTG 59.351 33.333 0.00 0.00 36.03 2.32
86 87 7.715657 TCATGCAAGTTTGACTTTCTGTAATT 58.284 30.769 0.00 0.00 36.03 1.40
87 88 7.275888 TCATGCAAGTTTGACTTTCTGTAAT 57.724 32.000 0.00 0.00 36.03 1.89
88 89 6.691754 TCATGCAAGTTTGACTTTCTGTAA 57.308 33.333 0.00 0.00 36.03 2.41
89 90 6.691754 TTCATGCAAGTTTGACTTTCTGTA 57.308 33.333 0.00 0.00 36.03 2.74
90 91 5.581126 TTCATGCAAGTTTGACTTTCTGT 57.419 34.783 0.00 0.00 36.03 3.41
91 92 6.753279 TCTTTTCATGCAAGTTTGACTTTCTG 59.247 34.615 0.00 0.00 36.03 3.02
92 93 6.753744 GTCTTTTCATGCAAGTTTGACTTTCT 59.246 34.615 0.00 0.00 36.03 2.52
93 94 6.531240 TGTCTTTTCATGCAAGTTTGACTTTC 59.469 34.615 0.00 0.00 36.03 2.62
94 95 6.311200 GTGTCTTTTCATGCAAGTTTGACTTT 59.689 34.615 0.00 0.00 36.03 2.66
95 96 5.807011 GTGTCTTTTCATGCAAGTTTGACTT 59.193 36.000 0.00 0.00 39.39 3.01
96 97 5.343249 GTGTCTTTTCATGCAAGTTTGACT 58.657 37.500 0.00 0.00 0.00 3.41
97 98 4.504097 GGTGTCTTTTCATGCAAGTTTGAC 59.496 41.667 0.00 0.00 0.00 3.18
98 99 4.681744 GGTGTCTTTTCATGCAAGTTTGA 58.318 39.130 0.00 0.00 0.00 2.69
99 100 3.486841 CGGTGTCTTTTCATGCAAGTTTG 59.513 43.478 0.00 0.00 0.00 2.93
100 101 3.705604 CGGTGTCTTTTCATGCAAGTTT 58.294 40.909 0.00 0.00 0.00 2.66
101 102 2.543653 GCGGTGTCTTTTCATGCAAGTT 60.544 45.455 0.00 0.00 0.00 2.66
102 103 1.001378 GCGGTGTCTTTTCATGCAAGT 60.001 47.619 0.00 0.00 0.00 3.16
103 104 1.267806 AGCGGTGTCTTTTCATGCAAG 59.732 47.619 0.00 0.00 0.00 4.01
104 105 1.317613 AGCGGTGTCTTTTCATGCAA 58.682 45.000 0.00 0.00 0.00 4.08
105 106 2.076100 CTAGCGGTGTCTTTTCATGCA 58.924 47.619 0.00 0.00 0.00 3.96
106 107 2.346803 TCTAGCGGTGTCTTTTCATGC 58.653 47.619 0.00 0.00 0.00 4.06
107 108 3.745975 TGTTCTAGCGGTGTCTTTTCATG 59.254 43.478 0.00 0.00 0.00 3.07
108 109 4.002906 TGTTCTAGCGGTGTCTTTTCAT 57.997 40.909 0.00 0.00 0.00 2.57
109 110 3.462483 TGTTCTAGCGGTGTCTTTTCA 57.538 42.857 0.00 0.00 0.00 2.69
110 111 6.663944 ATAATGTTCTAGCGGTGTCTTTTC 57.336 37.500 0.00 0.00 0.00 2.29
111 112 8.556213 TTAATAATGTTCTAGCGGTGTCTTTT 57.444 30.769 0.00 0.00 0.00 2.27
112 113 8.038944 TCTTAATAATGTTCTAGCGGTGTCTTT 58.961 33.333 0.00 0.00 0.00 2.52
113 114 7.491696 GTCTTAATAATGTTCTAGCGGTGTCTT 59.508 37.037 0.00 0.00 0.00 3.01
114 115 6.979238 GTCTTAATAATGTTCTAGCGGTGTCT 59.021 38.462 0.00 0.00 0.00 3.41
115 116 6.979238 AGTCTTAATAATGTTCTAGCGGTGTC 59.021 38.462 0.00 0.00 0.00 3.67
116 117 6.875076 AGTCTTAATAATGTTCTAGCGGTGT 58.125 36.000 0.00 0.00 0.00 4.16
117 118 6.978659 TGAGTCTTAATAATGTTCTAGCGGTG 59.021 38.462 0.00 0.00 0.00 4.94
118 119 7.108841 TGAGTCTTAATAATGTTCTAGCGGT 57.891 36.000 0.00 0.00 0.00 5.68
119 120 7.707035 ACTTGAGTCTTAATAATGTTCTAGCGG 59.293 37.037 0.00 0.00 0.00 5.52
120 121 8.635877 ACTTGAGTCTTAATAATGTTCTAGCG 57.364 34.615 0.00 0.00 0.00 4.26
121 122 9.587772 TGACTTGAGTCTTAATAATGTTCTAGC 57.412 33.333 12.00 0.00 44.99 3.42
133 134 8.774586 GCTTTTCTACATTGACTTGAGTCTTAA 58.225 33.333 12.00 0.30 44.99 1.85
134 135 7.931407 TGCTTTTCTACATTGACTTGAGTCTTA 59.069 33.333 12.00 1.69 44.99 2.10
135 136 6.767902 TGCTTTTCTACATTGACTTGAGTCTT 59.232 34.615 12.00 0.00 44.99 3.01
136 137 6.291377 TGCTTTTCTACATTGACTTGAGTCT 58.709 36.000 12.00 0.00 44.99 3.24
137 138 6.545504 TGCTTTTCTACATTGACTTGAGTC 57.454 37.500 4.20 4.20 44.97 3.36
138 139 8.621532 TTATGCTTTTCTACATTGACTTGAGT 57.378 30.769 0.00 0.00 0.00 3.41
139 140 9.499585 CATTATGCTTTTCTACATTGACTTGAG 57.500 33.333 0.00 0.00 0.00 3.02
140 141 9.230122 TCATTATGCTTTTCTACATTGACTTGA 57.770 29.630 0.00 0.00 0.00 3.02
141 142 9.844790 TTCATTATGCTTTTCTACATTGACTTG 57.155 29.630 0.00 0.00 0.00 3.16
143 144 9.846248 GTTTCATTATGCTTTTCTACATTGACT 57.154 29.630 0.00 0.00 0.00 3.41
144 145 9.624697 TGTTTCATTATGCTTTTCTACATTGAC 57.375 29.630 0.00 0.00 0.00 3.18
149 150 9.283768 TCTCTTGTTTCATTATGCTTTTCTACA 57.716 29.630 0.00 0.00 0.00 2.74
164 165 9.890629 AGCATGTTATTAGTATCTCTTGTTTCA 57.109 29.630 0.00 0.00 0.00 2.69
195 196 9.418045 CGTTTTTCACTTGTGGGAATAATTTAT 57.582 29.630 0.64 0.00 0.00 1.40
196 197 7.868415 CCGTTTTTCACTTGTGGGAATAATTTA 59.132 33.333 0.64 0.00 0.00 1.40
197 198 6.704050 CCGTTTTTCACTTGTGGGAATAATTT 59.296 34.615 0.64 0.00 0.00 1.82
198 199 6.183360 ACCGTTTTTCACTTGTGGGAATAATT 60.183 34.615 0.64 0.00 0.00 1.40
199 200 5.303333 ACCGTTTTTCACTTGTGGGAATAAT 59.697 36.000 0.64 0.00 0.00 1.28
200 201 4.645588 ACCGTTTTTCACTTGTGGGAATAA 59.354 37.500 0.64 0.00 0.00 1.40
201 202 4.036971 CACCGTTTTTCACTTGTGGGAATA 59.963 41.667 0.64 0.00 0.00 1.75
202 203 3.028130 ACCGTTTTTCACTTGTGGGAAT 58.972 40.909 0.64 0.00 0.00 3.01
203 204 2.164624 CACCGTTTTTCACTTGTGGGAA 59.835 45.455 0.64 0.00 0.00 3.97
204 205 1.746220 CACCGTTTTTCACTTGTGGGA 59.254 47.619 0.64 0.00 0.00 4.37
205 206 1.801025 GCACCGTTTTTCACTTGTGGG 60.801 52.381 0.64 0.00 0.00 4.61
206 207 1.135257 TGCACCGTTTTTCACTTGTGG 60.135 47.619 0.64 0.00 0.00 4.17
207 208 2.184448 CTGCACCGTTTTTCACTTGTG 58.816 47.619 0.00 0.00 0.00 3.33
208 209 1.469079 GCTGCACCGTTTTTCACTTGT 60.469 47.619 0.00 0.00 0.00 3.16
209 210 1.199624 GCTGCACCGTTTTTCACTTG 58.800 50.000 0.00 0.00 0.00 3.16
210 211 0.248458 CGCTGCACCGTTTTTCACTT 60.248 50.000 0.00 0.00 0.00 3.16
211 212 1.092921 TCGCTGCACCGTTTTTCACT 61.093 50.000 0.64 0.00 0.00 3.41
212 213 0.248296 TTCGCTGCACCGTTTTTCAC 60.248 50.000 0.64 0.00 0.00 3.18
213 214 0.028770 CTTCGCTGCACCGTTTTTCA 59.971 50.000 0.64 0.00 0.00 2.69
214 215 1.268778 GCTTCGCTGCACCGTTTTTC 61.269 55.000 0.64 0.00 0.00 2.29
215 216 1.299089 GCTTCGCTGCACCGTTTTT 60.299 52.632 0.64 0.00 0.00 1.94
216 217 2.331451 GCTTCGCTGCACCGTTTT 59.669 55.556 0.64 0.00 0.00 2.43
217 218 4.012895 CGCTTCGCTGCACCGTTT 62.013 61.111 0.64 0.00 0.00 3.60
231 232 4.735132 TAGAGGCAAACGCGCGCT 62.735 61.111 32.58 17.02 0.00 5.92
232 233 4.210304 CTAGAGGCAAACGCGCGC 62.210 66.667 32.58 23.91 0.00 6.86
233 234 2.809601 ACTAGAGGCAAACGCGCG 60.810 61.111 30.96 30.96 0.00 6.86
234 235 2.740714 CCACTAGAGGCAAACGCGC 61.741 63.158 5.73 0.00 0.00 6.86
235 236 0.949105 AACCACTAGAGGCAAACGCG 60.949 55.000 3.53 3.53 0.00 6.01
236 237 1.197036 GAAACCACTAGAGGCAAACGC 59.803 52.381 6.07 0.00 0.00 4.84
237 238 2.767505 AGAAACCACTAGAGGCAAACG 58.232 47.619 6.07 0.00 0.00 3.60
238 239 4.154375 GCTTAGAAACCACTAGAGGCAAAC 59.846 45.833 6.07 0.00 0.00 2.93
239 240 4.202419 TGCTTAGAAACCACTAGAGGCAAA 60.202 41.667 6.07 0.00 0.00 3.68
240 241 3.326588 TGCTTAGAAACCACTAGAGGCAA 59.673 43.478 6.07 0.00 0.00 4.52
241 242 2.903784 TGCTTAGAAACCACTAGAGGCA 59.096 45.455 6.07 0.00 0.00 4.75
242 243 3.611766 TGCTTAGAAACCACTAGAGGC 57.388 47.619 6.07 0.00 0.00 4.70
243 244 3.873952 GCATGCTTAGAAACCACTAGAGG 59.126 47.826 11.37 4.44 0.00 3.69
244 245 3.553511 CGCATGCTTAGAAACCACTAGAG 59.446 47.826 17.13 0.00 0.00 2.43
245 246 3.194755 TCGCATGCTTAGAAACCACTAGA 59.805 43.478 17.13 0.00 0.00 2.43
246 247 3.521560 TCGCATGCTTAGAAACCACTAG 58.478 45.455 17.13 0.00 0.00 2.57
247 248 3.603158 TCGCATGCTTAGAAACCACTA 57.397 42.857 17.13 0.00 0.00 2.74
248 249 2.472695 TCGCATGCTTAGAAACCACT 57.527 45.000 17.13 0.00 0.00 4.00
249 250 2.742053 TCTTCGCATGCTTAGAAACCAC 59.258 45.455 17.13 0.00 0.00 4.16
250 251 3.002791 CTCTTCGCATGCTTAGAAACCA 58.997 45.455 17.13 0.00 0.00 3.67
251 252 2.352960 CCTCTTCGCATGCTTAGAAACC 59.647 50.000 17.13 0.00 0.00 3.27
252 253 2.352960 CCCTCTTCGCATGCTTAGAAAC 59.647 50.000 17.13 0.00 0.00 2.78
253 254 2.632377 CCCTCTTCGCATGCTTAGAAA 58.368 47.619 17.13 1.48 0.00 2.52
254 255 1.743772 GCCCTCTTCGCATGCTTAGAA 60.744 52.381 17.13 10.98 0.00 2.10
255 256 0.179073 GCCCTCTTCGCATGCTTAGA 60.179 55.000 17.13 15.98 0.00 2.10
256 257 0.179062 AGCCCTCTTCGCATGCTTAG 60.179 55.000 17.13 12.48 0.00 2.18
257 258 0.179073 GAGCCCTCTTCGCATGCTTA 60.179 55.000 17.13 0.06 31.23 3.09
258 259 1.451028 GAGCCCTCTTCGCATGCTT 60.451 57.895 17.13 0.00 31.23 3.91
259 260 2.188994 GAGCCCTCTTCGCATGCT 59.811 61.111 17.13 0.00 34.40 3.79
260 261 3.267860 CGAGCCCTCTTCGCATGC 61.268 66.667 7.91 7.91 0.00 4.06
261 262 2.587194 CCGAGCCCTCTTCGCATG 60.587 66.667 0.00 0.00 0.00 4.06
262 263 4.537433 GCCGAGCCCTCTTCGCAT 62.537 66.667 0.00 0.00 0.00 4.73
279 280 3.490759 GACACCGGTCATGCAGCG 61.491 66.667 2.59 8.99 43.73 5.18
287 288 0.613777 AAGAATCCCTGACACCGGTC 59.386 55.000 2.59 0.00 44.57 4.79
295 296 1.559219 TGAATGCCGAAGAATCCCTGA 59.441 47.619 0.00 0.00 0.00 3.86
301 302 1.035139 GGCCATGAATGCCGAAGAAT 58.965 50.000 0.00 0.00 39.48 2.40
335 336 3.943479 TTGCCCGTTGATAGCGCGT 62.943 57.895 8.43 0.00 0.00 6.01
352 353 4.142227 GCTGAATGCTGACTGGAATCATTT 60.142 41.667 0.00 0.00 38.95 2.32
371 372 1.529152 TTCCTTGACGTAGCGGCTGA 61.529 55.000 13.86 0.00 35.04 4.26
393 394 2.028925 CCCGCACCAAAAGCCAAC 59.971 61.111 0.00 0.00 0.00 3.77
424 425 3.190849 CAGCGTGCCATCCTGTCG 61.191 66.667 0.00 0.00 0.00 4.35
425 426 2.821366 CCAGCGTGCCATCCTGTC 60.821 66.667 0.00 0.00 0.00 3.51
426 427 3.612247 GACCAGCGTGCCATCCTGT 62.612 63.158 0.00 0.00 0.00 4.00
427 428 2.821366 GACCAGCGTGCCATCCTG 60.821 66.667 0.00 0.00 0.00 3.86
428 429 4.457496 CGACCAGCGTGCCATCCT 62.457 66.667 0.00 0.00 34.64 3.24
429 430 3.740128 ATCGACCAGCGTGCCATCC 62.740 63.158 0.00 0.00 41.80 3.51
430 431 1.766143 GAATCGACCAGCGTGCCATC 61.766 60.000 0.00 0.00 41.80 3.51
431 432 1.815421 GAATCGACCAGCGTGCCAT 60.815 57.895 0.00 0.00 41.80 4.40
432 433 2.434185 GAATCGACCAGCGTGCCA 60.434 61.111 0.00 0.00 41.80 4.92
433 434 2.434185 TGAATCGACCAGCGTGCC 60.434 61.111 0.00 0.00 41.80 5.01
434 435 2.778679 GTGAATCGACCAGCGTGC 59.221 61.111 0.00 0.00 41.80 5.34
435 436 1.733041 ACGTGAATCGACCAGCGTG 60.733 57.895 12.60 0.00 42.86 5.34
436 437 1.733041 CACGTGAATCGACCAGCGT 60.733 57.895 10.90 0.00 42.86 5.07
437 438 1.733041 ACACGTGAATCGACCAGCG 60.733 57.895 25.01 0.00 42.86 5.18
438 439 0.666274 TCACACGTGAATCGACCAGC 60.666 55.000 25.01 0.00 42.86 4.85
439 440 1.068541 TCTCACACGTGAATCGACCAG 60.069 52.381 25.01 5.63 42.86 4.00
440 441 0.955905 TCTCACACGTGAATCGACCA 59.044 50.000 25.01 0.00 42.86 4.02
441 442 1.337821 GTCTCACACGTGAATCGACC 58.662 55.000 25.01 0.00 42.86 4.79
442 443 1.068472 AGGTCTCACACGTGAATCGAC 60.068 52.381 25.01 19.97 42.86 4.20
443 444 1.068541 CAGGTCTCACACGTGAATCGA 60.069 52.381 25.01 11.61 42.57 3.59
444 445 1.340658 CAGGTCTCACACGTGAATCG 58.659 55.000 25.01 7.61 42.57 3.34
445 446 1.714794 CCAGGTCTCACACGTGAATC 58.285 55.000 25.01 4.87 42.57 2.52
452 453 2.159085 GGTAGTATGCCAGGTCTCACAC 60.159 54.545 0.00 0.00 42.29 3.82
481 482 3.148084 CACCACCTTGACCGTCCT 58.852 61.111 0.00 0.00 0.00 3.85
482 483 2.668550 GCACCACCTTGACCGTCC 60.669 66.667 0.00 0.00 0.00 4.79
483 484 1.668151 GAGCACCACCTTGACCGTC 60.668 63.158 0.00 0.00 0.00 4.79
495 503 3.937706 TGTCGTACTAGAACTAGAGCACC 59.062 47.826 14.64 2.17 36.97 5.01
526 534 1.337703 GGCACTGTTCAAAGATGCACA 59.662 47.619 0.00 0.00 38.05 4.57
589 600 1.187087 CACTCTCCGCCTAGTTTCCT 58.813 55.000 0.00 0.00 0.00 3.36
598 609 3.050275 GTTGCACCACTCTCCGCC 61.050 66.667 0.00 0.00 0.00 6.13
601 612 0.603975 GTCCTGTTGCACCACTCTCC 60.604 60.000 0.00 0.00 0.00 3.71
602 613 0.946221 CGTCCTGTTGCACCACTCTC 60.946 60.000 0.00 0.00 0.00 3.20
603 614 1.069765 CGTCCTGTTGCACCACTCT 59.930 57.895 0.00 0.00 0.00 3.24
604 615 2.607892 GCGTCCTGTTGCACCACTC 61.608 63.158 0.00 0.00 0.00 3.51
605 616 2.591715 GCGTCCTGTTGCACCACT 60.592 61.111 0.00 0.00 0.00 4.00
606 617 2.899838 TGCGTCCTGTTGCACCAC 60.900 61.111 0.00 0.00 35.90 4.16
622 633 3.479203 TGAGGGCGGGCATAGGTG 61.479 66.667 3.27 0.00 0.00 4.00
623 634 3.480133 GTGAGGGCGGGCATAGGT 61.480 66.667 3.27 0.00 0.00 3.08
624 635 4.256180 GGTGAGGGCGGGCATAGG 62.256 72.222 3.27 0.00 0.00 2.57
625 636 4.609018 CGGTGAGGGCGGGCATAG 62.609 72.222 3.27 0.00 0.00 2.23
658 669 2.917227 TGTCCAGGAGAGCACGCA 60.917 61.111 0.00 0.00 0.00 5.24
674 685 2.086869 CCTAGTGTTTGGACATGGCTG 58.913 52.381 0.00 0.00 38.23 4.85
675 686 1.705186 ACCTAGTGTTTGGACATGGCT 59.295 47.619 0.00 0.00 38.23 4.75
676 687 2.200373 ACCTAGTGTTTGGACATGGC 57.800 50.000 0.00 0.00 38.23 4.40
677 688 3.502211 GTGAACCTAGTGTTTGGACATGG 59.498 47.826 0.00 0.00 37.29 3.66
678 689 4.133820 TGTGAACCTAGTGTTTGGACATG 58.866 43.478 0.00 0.00 37.29 3.21
679 690 4.431416 TGTGAACCTAGTGTTTGGACAT 57.569 40.909 0.00 0.00 37.29 3.06
680 691 3.916359 TGTGAACCTAGTGTTTGGACA 57.084 42.857 0.00 0.00 37.29 4.02
681 692 5.354234 CCATATGTGAACCTAGTGTTTGGAC 59.646 44.000 1.24 0.00 37.29 4.02
682 693 5.496556 CCATATGTGAACCTAGTGTTTGGA 58.503 41.667 1.24 0.00 37.29 3.53
683 694 4.096382 GCCATATGTGAACCTAGTGTTTGG 59.904 45.833 1.24 0.00 37.29 3.28
684 695 4.943705 AGCCATATGTGAACCTAGTGTTTG 59.056 41.667 1.24 0.00 37.29 2.93
685 696 4.943705 CAGCCATATGTGAACCTAGTGTTT 59.056 41.667 1.24 0.00 37.29 2.83
686 697 4.517285 CAGCCATATGTGAACCTAGTGTT 58.483 43.478 1.24 0.00 40.81 3.32
687 698 3.682718 GCAGCCATATGTGAACCTAGTGT 60.683 47.826 1.24 0.00 0.00 3.55
688 699 2.874701 GCAGCCATATGTGAACCTAGTG 59.125 50.000 1.24 0.00 0.00 2.74
689 700 2.774234 AGCAGCCATATGTGAACCTAGT 59.226 45.455 1.24 0.00 0.00 2.57
690 701 3.482156 AGCAGCCATATGTGAACCTAG 57.518 47.619 1.24 0.00 0.00 3.02
691 702 3.433598 GGAAGCAGCCATATGTGAACCTA 60.434 47.826 1.24 0.00 0.00 3.08
692 703 2.648059 GAAGCAGCCATATGTGAACCT 58.352 47.619 1.24 0.00 0.00 3.50
693 704 1.678101 GGAAGCAGCCATATGTGAACC 59.322 52.381 1.24 0.00 0.00 3.62
694 705 2.368439 TGGAAGCAGCCATATGTGAAC 58.632 47.619 1.24 0.00 31.66 3.18
695 706 2.804986 TGGAAGCAGCCATATGTGAA 57.195 45.000 1.24 0.00 31.66 3.18
696 707 2.173143 TCATGGAAGCAGCCATATGTGA 59.827 45.455 9.68 3.06 46.70 3.58
697 708 2.552743 CTCATGGAAGCAGCCATATGTG 59.447 50.000 9.68 0.00 46.70 3.21
698 709 2.488528 CCTCATGGAAGCAGCCATATGT 60.489 50.000 9.68 0.00 46.70 2.29
699 710 2.160205 CCTCATGGAAGCAGCCATATG 58.840 52.381 9.68 0.00 46.70 1.78
700 711 1.547223 GCCTCATGGAAGCAGCCATAT 60.547 52.381 9.68 0.00 46.70 1.78
701 712 0.179009 GCCTCATGGAAGCAGCCATA 60.179 55.000 9.68 0.28 46.70 2.74
703 714 2.044650 GCCTCATGGAAGCAGCCA 60.045 61.111 0.00 0.00 43.23 4.75
704 715 1.455217 ATGCCTCATGGAAGCAGCC 60.455 57.895 10.27 0.00 40.40 4.85
705 716 0.750546 TCATGCCTCATGGAAGCAGC 60.751 55.000 10.27 0.00 41.66 5.25
706 717 1.309950 CTCATGCCTCATGGAAGCAG 58.690 55.000 10.27 4.44 41.66 4.24
707 718 0.750546 GCTCATGCCTCATGGAAGCA 60.751 55.000 12.65 7.51 39.73 3.91
708 719 0.750546 TGCTCATGCCTCATGGAAGC 60.751 55.000 11.33 11.33 41.66 3.86
709 720 1.022735 GTGCTCATGCCTCATGGAAG 58.977 55.000 6.92 0.24 41.66 3.46
710 721 0.745486 CGTGCTCATGCCTCATGGAA 60.745 55.000 6.92 0.00 41.66 3.53
711 722 1.153309 CGTGCTCATGCCTCATGGA 60.153 57.895 6.92 0.00 41.66 3.41
712 723 2.184830 CCGTGCTCATGCCTCATGG 61.185 63.158 6.92 5.82 41.66 3.66
713 724 2.184830 CCCGTGCTCATGCCTCATG 61.185 63.158 0.59 0.59 42.60 3.07
714 725 2.191375 CCCGTGCTCATGCCTCAT 59.809 61.111 0.00 0.00 38.71 2.90
715 726 4.100084 CCCCGTGCTCATGCCTCA 62.100 66.667 0.00 0.00 38.71 3.86
716 727 3.329542 TTCCCCGTGCTCATGCCTC 62.330 63.158 0.00 0.00 38.71 4.70
717 728 3.329889 TTCCCCGTGCTCATGCCT 61.330 61.111 0.00 0.00 38.71 4.75
718 729 2.825836 CTTCCCCGTGCTCATGCC 60.826 66.667 0.00 0.00 38.71 4.40
719 730 3.512516 GCTTCCCCGTGCTCATGC 61.513 66.667 0.00 0.00 40.20 4.06
720 731 1.377725 AAGCTTCCCCGTGCTCATG 60.378 57.895 0.00 0.00 38.75 3.07
721 732 1.377725 CAAGCTTCCCCGTGCTCAT 60.378 57.895 0.00 0.00 38.75 2.90
722 733 2.032528 CAAGCTTCCCCGTGCTCA 59.967 61.111 0.00 0.00 38.75 4.26
723 734 3.435186 GCAAGCTTCCCCGTGCTC 61.435 66.667 0.00 0.00 38.75 4.26
726 737 2.282462 AAGGCAAGCTTCCCCGTG 60.282 61.111 1.69 0.00 0.00 4.94
727 738 2.282462 CAAGGCAAGCTTCCCCGT 60.282 61.111 1.69 0.00 0.00 5.28
728 739 3.064324 CCAAGGCAAGCTTCCCCG 61.064 66.667 1.69 0.00 0.00 5.73
729 740 2.681421 CCCAAGGCAAGCTTCCCC 60.681 66.667 1.69 3.52 0.00 4.81
730 741 1.979155 GTCCCAAGGCAAGCTTCCC 60.979 63.158 0.00 0.00 0.00 3.97
731 742 0.328258 TAGTCCCAAGGCAAGCTTCC 59.672 55.000 0.00 0.95 0.00 3.46
732 743 1.454201 GTAGTCCCAAGGCAAGCTTC 58.546 55.000 0.00 0.00 0.00 3.86
733 744 0.038310 GGTAGTCCCAAGGCAAGCTT 59.962 55.000 0.00 0.00 0.00 3.74
734 745 1.133809 TGGTAGTCCCAAGGCAAGCT 61.134 55.000 0.00 0.00 41.50 3.74
735 746 0.678048 CTGGTAGTCCCAAGGCAAGC 60.678 60.000 0.00 0.00 44.65 4.01
736 747 0.678048 GCTGGTAGTCCCAAGGCAAG 60.678 60.000 0.00 0.00 44.65 4.01
737 748 1.378762 GCTGGTAGTCCCAAGGCAA 59.621 57.895 0.00 0.00 44.65 4.52
738 749 1.845664 TGCTGGTAGTCCCAAGGCA 60.846 57.895 0.00 0.00 44.65 4.75
739 750 1.377333 GTGCTGGTAGTCCCAAGGC 60.377 63.158 0.00 0.00 44.65 4.35
740 751 0.400213 TTGTGCTGGTAGTCCCAAGG 59.600 55.000 0.00 0.00 44.65 3.61
741 752 1.611673 CCTTGTGCTGGTAGTCCCAAG 60.612 57.143 0.00 0.00 44.65 3.61
742 753 0.400213 CCTTGTGCTGGTAGTCCCAA 59.600 55.000 0.00 0.00 44.65 4.12
743 754 1.488705 CCCTTGTGCTGGTAGTCCCA 61.489 60.000 0.00 0.00 42.51 4.37
744 755 1.198759 TCCCTTGTGCTGGTAGTCCC 61.199 60.000 0.00 0.00 0.00 4.46
745 756 0.036294 GTCCCTTGTGCTGGTAGTCC 60.036 60.000 0.00 0.00 0.00 3.85
746 757 0.389948 CGTCCCTTGTGCTGGTAGTC 60.390 60.000 0.00 0.00 0.00 2.59
747 758 1.671742 CGTCCCTTGTGCTGGTAGT 59.328 57.895 0.00 0.00 0.00 2.73
748 759 1.079127 CCGTCCCTTGTGCTGGTAG 60.079 63.158 0.00 0.00 0.00 3.18
749 760 3.065306 CCGTCCCTTGTGCTGGTA 58.935 61.111 0.00 0.00 0.00 3.25
750 761 4.643387 GCCGTCCCTTGTGCTGGT 62.643 66.667 0.00 0.00 0.00 4.00
751 762 4.641645 TGCCGTCCCTTGTGCTGG 62.642 66.667 0.00 0.00 0.00 4.85
754 765 2.594592 ACTTGCCGTCCCTTGTGC 60.595 61.111 0.00 0.00 0.00 4.57
770 781 0.898789 TCCAGTCTGAACGGGGAGAC 60.899 60.000 0.00 0.00 40.76 3.36
774 785 0.392998 CCATTCCAGTCTGAACGGGG 60.393 60.000 0.00 0.00 40.76 5.73
815 826 7.448469 TCATGATTCATGAGACGGATTACTAGA 59.552 37.037 22.47 0.00 44.60 2.43
830 841 5.693555 ACGCTACTGTGTATCATGATTCATG 59.306 40.000 18.71 18.71 37.89 3.07
853 864 1.740296 CATGGACCACGACCGGAAC 60.740 63.158 9.46 0.00 0.00 3.62
854 865 2.211410 ACATGGACCACGACCGGAA 61.211 57.895 9.46 0.00 0.00 4.30
855 866 2.602267 ACATGGACCACGACCGGA 60.602 61.111 9.46 0.00 0.00 5.14
856 867 2.434185 CACATGGACCACGACCGG 60.434 66.667 0.00 0.00 0.00 5.28
857 868 3.118454 GCACATGGACCACGACCG 61.118 66.667 0.00 0.00 0.00 4.79
858 869 2.031919 TGCACATGGACCACGACC 59.968 61.111 0.00 0.00 0.00 4.79
859 870 1.291877 GACTGCACATGGACCACGAC 61.292 60.000 0.00 0.00 0.00 4.34
860 871 1.005037 GACTGCACATGGACCACGA 60.005 57.895 0.00 0.00 0.00 4.35
861 872 1.293963 CTGACTGCACATGGACCACG 61.294 60.000 0.00 0.00 0.00 4.94
862 873 0.957395 CCTGACTGCACATGGACCAC 60.957 60.000 0.00 0.00 0.00 4.16
863 874 1.376086 CCTGACTGCACATGGACCA 59.624 57.895 0.00 0.00 0.00 4.02
864 875 2.042831 GCCTGACTGCACATGGACC 61.043 63.158 0.00 0.00 0.00 4.46
865 876 0.679002 ATGCCTGACTGCACATGGAC 60.679 55.000 0.00 0.00 45.48 4.02
866 877 0.678684 CATGCCTGACTGCACATGGA 60.679 55.000 0.00 0.00 45.48 3.41
867 878 1.807226 CATGCCTGACTGCACATGG 59.193 57.895 0.00 0.00 45.48 3.66
868 879 1.138883 GCATGCCTGACTGCACATG 59.861 57.895 6.36 8.05 45.48 3.21
869 880 1.001269 AGCATGCCTGACTGCACAT 60.001 52.632 15.66 0.00 45.48 3.21
870 881 1.673337 GAGCATGCCTGACTGCACA 60.673 57.895 15.66 0.00 45.48 4.57
871 882 2.747822 CGAGCATGCCTGACTGCAC 61.748 63.158 15.66 0.00 45.48 4.57
872 883 2.435410 CGAGCATGCCTGACTGCA 60.435 61.111 15.66 0.00 46.94 4.41
873 884 3.873883 GCGAGCATGCCTGACTGC 61.874 66.667 15.66 5.87 38.69 4.40
891 902 1.874562 GCCAGCTGCTTCTGTCTTG 59.125 57.895 8.66 0.00 36.87 3.02
921 932 5.278022 GCTATTATAGGAGTGTTGCCTTTGC 60.278 44.000 1.12 0.00 36.96 3.68
922 933 5.239525 GGCTATTATAGGAGTGTTGCCTTTG 59.760 44.000 1.12 0.00 36.96 2.77
923 934 5.132816 AGGCTATTATAGGAGTGTTGCCTTT 59.867 40.000 1.12 0.00 44.78 3.11
924 935 4.660771 AGGCTATTATAGGAGTGTTGCCTT 59.339 41.667 1.12 0.00 44.78 4.35
925 936 4.235372 AGGCTATTATAGGAGTGTTGCCT 58.765 43.478 1.12 0.00 42.69 4.75
926 937 4.563786 GGAGGCTATTATAGGAGTGTTGCC 60.564 50.000 1.12 0.00 38.24 4.52
927 938 4.570930 GGAGGCTATTATAGGAGTGTTGC 58.429 47.826 1.12 0.00 0.00 4.17
928 939 4.281182 ACGGAGGCTATTATAGGAGTGTTG 59.719 45.833 1.12 0.00 0.00 3.33
1017 1464 4.719273 AGCAAATTTAGTAGGAGGAGAGCT 59.281 41.667 0.00 0.00 0.00 4.09
1018 1465 5.029807 AGCAAATTTAGTAGGAGGAGAGC 57.970 43.478 0.00 0.00 0.00 4.09
1159 1612 1.273327 GGAGGCAGTTTGGGAAATGTG 59.727 52.381 0.00 0.00 33.58 3.21
1356 1812 1.288127 CAACTGAGCTTGCTTGGCC 59.712 57.895 0.00 0.00 0.00 5.36
1394 1850 2.484287 ATCACCTTGGCCCTTGACGG 62.484 60.000 0.00 0.00 0.00 4.79
1428 1891 2.032620 TCGGTAGGAGAATGGAAGCTC 58.967 52.381 0.00 0.00 0.00 4.09
1463 1926 7.599245 ACTTTGTAGCACTAGTAATGTTCTGAC 59.401 37.037 0.00 0.00 0.00 3.51
1699 2169 7.970614 CCAATCAACAGCCTTAAAAGATAAGTC 59.029 37.037 0.00 0.00 0.00 3.01
1705 2175 3.831911 CCCCAATCAACAGCCTTAAAAGA 59.168 43.478 0.00 0.00 0.00 2.52
1751 2221 5.210430 TGAGGTTGCCATCATAATCCAATT 58.790 37.500 0.00 0.00 0.00 2.32
2196 2675 8.788806 CGTAGTGTCTTAGGAATCTTGAGATAT 58.211 37.037 0.00 0.00 33.73 1.63
2370 2849 9.986157 AATATAGCCAACAAGAATCCATATGAT 57.014 29.630 3.65 0.00 34.22 2.45
2809 3288 3.992427 CACCGAAGTAACCTTTCACTACC 59.008 47.826 0.00 0.00 0.00 3.18
2827 3315 3.735591 TCTTAAACCTTTCACTCCACCG 58.264 45.455 0.00 0.00 0.00 4.94
2851 3339 0.325671 CCTCTTGCCACCCCTAGAGA 60.326 60.000 0.00 0.00 37.02 3.10
2947 3435 5.416952 CACTGATCTTTGGCTCCAAGTTATT 59.583 40.000 1.26 0.00 37.24 1.40
3141 3629 0.606401 ATGCCCAGTCTGAAACACGG 60.606 55.000 0.00 0.00 0.00 4.94
3218 3706 0.459585 GCCCTGCAGCATCACATTTG 60.460 55.000 8.66 0.00 0.00 2.32
3232 3720 0.813184 CATAAGTGTTGGCTGCCCTG 59.187 55.000 17.53 0.00 0.00 4.45
3257 3779 4.058124 CAACCTCAAGTCAATGAAGTCGA 58.942 43.478 0.00 0.00 0.00 4.20
3366 3888 3.841643 CATCTGCACAAGGTTTTCCATC 58.158 45.455 0.00 0.00 43.73 3.51
3375 3897 2.669364 GAAACAAGCATCTGCACAAGG 58.331 47.619 4.79 0.00 45.16 3.61
3622 4170 0.890683 GAATTCCAAGGCACACCCAG 59.109 55.000 0.00 0.00 36.11 4.45
3689 4237 9.066892 ACAGCATTTTCTAGTGACTTTTCATTA 57.933 29.630 0.00 0.00 33.11 1.90
3710 4258 3.496309 CTGCTCCAACCCCACAGCA 62.496 63.158 0.00 0.00 39.58 4.41
3718 4266 0.108945 GATTTGCTGCTGCTCCAACC 60.109 55.000 17.00 0.00 40.48 3.77
3801 4350 2.751259 AGGACTCGCGTACATGAAGTTA 59.249 45.455 5.77 0.00 0.00 2.24
3926 4475 7.072177 TCGATTAGTTCCTTGCATAACTTTG 57.928 36.000 12.98 3.54 37.19 2.77
3937 4486 8.240267 AGAAAGCTACTATCGATTAGTTCCTT 57.760 34.615 1.71 8.15 41.49 3.36
4007 4557 2.081462 GTTTGGTAGTGGGTCGATTGG 58.919 52.381 0.00 0.00 0.00 3.16
4077 4957 6.834168 TTTTTGTATGGATCCAAAGGACTC 57.166 37.500 20.67 5.04 32.98 3.36
4143 5023 3.024547 AGAAGCAGCGATAGTACTCCAA 58.975 45.455 0.00 0.00 39.35 3.53
4162 5042 5.307976 CACCAAATATCTAGTGGGATGGAGA 59.692 44.000 11.66 0.00 36.69 3.71
4173 5053 4.320494 GCGAAATGCCCACCAAATATCTAG 60.320 45.833 0.00 0.00 37.76 2.43
4232 5112 5.560724 ACGCCTTTATCATAGCACCAATAT 58.439 37.500 0.00 0.00 0.00 1.28
4253 5133 0.446222 ATGGAACGCGGATGAAAACG 59.554 50.000 12.47 0.00 0.00 3.60
4254 5134 2.095466 TGAATGGAACGCGGATGAAAAC 60.095 45.455 12.47 0.00 0.00 2.43
4255 5135 2.095466 GTGAATGGAACGCGGATGAAAA 60.095 45.455 12.47 0.00 0.00 2.29
4256 5136 1.466950 GTGAATGGAACGCGGATGAAA 59.533 47.619 12.47 0.00 0.00 2.69
4257 5137 1.083489 GTGAATGGAACGCGGATGAA 58.917 50.000 12.47 0.00 0.00 2.57
4258 5138 0.036858 TGTGAATGGAACGCGGATGA 60.037 50.000 12.47 0.00 0.00 2.92
4259 5139 0.374758 CTGTGAATGGAACGCGGATG 59.625 55.000 12.47 0.00 0.00 3.51
4260 5140 1.369091 GCTGTGAATGGAACGCGGAT 61.369 55.000 12.47 0.00 0.00 4.18
4261 5141 2.032634 GCTGTGAATGGAACGCGGA 61.033 57.895 12.47 0.00 0.00 5.54
4262 5142 2.480555 GCTGTGAATGGAACGCGG 59.519 61.111 12.47 0.00 0.00 6.46
4263 5143 2.096406 CGCTGTGAATGGAACGCG 59.904 61.111 3.53 3.53 35.50 6.01
4264 5144 2.202349 GCGCTGTGAATGGAACGC 60.202 61.111 0.00 0.00 39.49 4.84
4265 5145 1.896339 TTCGCGCTGTGAATGGAACG 61.896 55.000 5.56 0.00 0.00 3.95
4266 5146 0.447801 ATTCGCGCTGTGAATGGAAC 59.552 50.000 5.56 0.00 40.60 3.62
4267 5147 0.726827 GATTCGCGCTGTGAATGGAA 59.273 50.000 17.74 3.41 41.91 3.53
4268 5148 1.420641 CGATTCGCGCTGTGAATGGA 61.421 55.000 17.74 0.00 41.91 3.41
4269 5149 1.011904 CGATTCGCGCTGTGAATGG 60.012 57.895 17.74 13.96 41.91 3.16
4270 5150 4.558309 CGATTCGCGCTGTGAATG 57.442 55.556 17.74 9.43 41.91 2.67
4298 5178 1.301558 GCATGGATCCCTGCGAGAG 60.302 63.158 23.82 0.00 0.00 3.20
4299 5179 2.811514 GGCATGGATCCCTGCGAGA 61.812 63.158 28.79 2.06 39.30 4.04
4300 5180 2.281345 GGCATGGATCCCTGCGAG 60.281 66.667 28.79 6.83 39.30 5.03
4301 5181 4.240103 CGGCATGGATCCCTGCGA 62.240 66.667 28.79 3.55 39.30 5.10
4304 5184 3.882326 AGCCGGCATGGATCCCTG 61.882 66.667 31.54 11.30 42.00 4.45
4305 5185 3.882326 CAGCCGGCATGGATCCCT 61.882 66.667 31.54 0.00 42.00 4.20
4306 5186 4.962836 CCAGCCGGCATGGATCCC 62.963 72.222 30.14 0.60 40.51 3.85
4360 5240 1.202222 ACCGTATAGCCGAGTGAAACG 60.202 52.381 0.00 0.00 45.86 3.60
4361 5241 2.573941 ACCGTATAGCCGAGTGAAAC 57.426 50.000 0.00 0.00 0.00 2.78
4362 5242 2.883574 CAACCGTATAGCCGAGTGAAA 58.116 47.619 0.00 0.00 0.00 2.69
4363 5243 1.470285 GCAACCGTATAGCCGAGTGAA 60.470 52.381 0.00 0.00 0.00 3.18
4364 5244 0.101759 GCAACCGTATAGCCGAGTGA 59.898 55.000 0.00 0.00 0.00 3.41
4365 5245 0.179121 TGCAACCGTATAGCCGAGTG 60.179 55.000 0.00 0.00 0.00 3.51
4366 5246 0.533491 TTGCAACCGTATAGCCGAGT 59.467 50.000 0.00 0.00 0.00 4.18
4367 5247 1.865865 ATTGCAACCGTATAGCCGAG 58.134 50.000 0.00 0.00 0.00 4.63
4368 5248 2.101082 TGTATTGCAACCGTATAGCCGA 59.899 45.455 0.00 0.00 0.00 5.54
4369 5249 2.475111 CTGTATTGCAACCGTATAGCCG 59.525 50.000 0.00 0.00 0.00 5.52
4370 5250 3.463944 ACTGTATTGCAACCGTATAGCC 58.536 45.455 0.00 0.00 0.00 3.93
4371 5251 4.116961 TGACTGTATTGCAACCGTATAGC 58.883 43.478 0.00 0.00 0.00 2.97
4372 5252 6.656314 TTTGACTGTATTGCAACCGTATAG 57.344 37.500 0.00 0.74 0.00 1.31
4373 5253 7.119992 ACAATTTGACTGTATTGCAACCGTATA 59.880 33.333 0.00 0.00 35.63 1.47
4374 5254 6.072175 ACAATTTGACTGTATTGCAACCGTAT 60.072 34.615 0.00 0.00 35.63 3.06
4375 5255 5.239744 ACAATTTGACTGTATTGCAACCGTA 59.760 36.000 0.00 0.00 35.63 4.02
4376 5256 4.037446 ACAATTTGACTGTATTGCAACCGT 59.963 37.500 0.00 0.00 35.63 4.83
4377 5257 4.545610 ACAATTTGACTGTATTGCAACCG 58.454 39.130 0.00 0.00 35.63 4.44
4378 5258 7.538575 AGATACAATTTGACTGTATTGCAACC 58.461 34.615 0.00 0.00 39.53 3.77
4379 5259 9.490663 GTAGATACAATTTGACTGTATTGCAAC 57.509 33.333 0.00 0.00 39.53 4.17
4380 5260 9.448438 AGTAGATACAATTTGACTGTATTGCAA 57.552 29.630 0.00 0.00 39.53 4.08
4381 5261 9.448438 AAGTAGATACAATTTGACTGTATTGCA 57.552 29.630 2.79 0.00 39.53 4.08
4396 5276 8.639761 GCTCAGGTAGGAATAAAGTAGATACAA 58.360 37.037 0.00 0.00 0.00 2.41
4397 5277 7.040617 CGCTCAGGTAGGAATAAAGTAGATACA 60.041 40.741 0.00 0.00 0.00 2.29
4398 5278 7.040548 ACGCTCAGGTAGGAATAAAGTAGATAC 60.041 40.741 0.00 0.00 0.00 2.24
4399 5279 7.002879 ACGCTCAGGTAGGAATAAAGTAGATA 58.997 38.462 0.00 0.00 0.00 1.98
4400 5280 5.834204 ACGCTCAGGTAGGAATAAAGTAGAT 59.166 40.000 0.00 0.00 0.00 1.98
4401 5281 5.198965 ACGCTCAGGTAGGAATAAAGTAGA 58.801 41.667 0.00 0.00 0.00 2.59
4402 5282 5.517322 ACGCTCAGGTAGGAATAAAGTAG 57.483 43.478 0.00 0.00 0.00 2.57
4403 5283 6.382869 GTACGCTCAGGTAGGAATAAAGTA 57.617 41.667 0.00 0.00 0.00 2.24
4404 5284 5.259832 GTACGCTCAGGTAGGAATAAAGT 57.740 43.478 0.00 0.00 0.00 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.