Multiple sequence alignment - TraesCS7D01G521500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G521500 chr7D 100.000 3631 0 0 1 3631 618713453 618709823 0.000000e+00 6706.0
1 TraesCS7D01G521500 chr7A 90.724 2846 214 22 816 3629 712350825 712347998 0.000000e+00 3747.0
2 TraesCS7D01G521500 chr7A 97.368 38 1 0 706 743 712351005 712350968 8.420000e-07 65.8
3 TraesCS7D01G521500 chr7B 90.713 2035 124 21 978 2980 713202632 713200631 0.000000e+00 2651.0
4 TraesCS7D01G521500 chr7B 91.554 663 41 10 2979 3631 713200471 713199814 0.000000e+00 900.0
5 TraesCS7D01G521500 chr5D 78.077 260 43 12 1469 1719 55049371 55049117 6.280000e-33 152.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G521500 chr7D 618709823 618713453 3630 True 6706.0 6706 100.0000 1 3631 1 chr7D.!!$R1 3630
1 TraesCS7D01G521500 chr7A 712347998 712351005 3007 True 1906.4 3747 94.0460 706 3629 2 chr7A.!!$R1 2923
2 TraesCS7D01G521500 chr7B 713199814 713202632 2818 True 1775.5 2651 91.1335 978 3631 2 chr7B.!!$R1 2653

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
772 804 0.035152 TGCCGTTCGTCCTAGTCCTA 60.035 55.0 0.00 0.0 0.00 2.94 F
1992 2084 0.310543 TGCACCGATTTGCTTGTGTC 59.689 50.0 5.42 0.0 43.41 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2348 2443 0.030638 GCAAAGAACCTTTCGCTGCA 59.969 50.0 0.0 0.0 40.0 4.41 R
3006 3282 0.108615 AGAAGGTCGATCAAGTGCCG 60.109 55.0 0.0 0.0 0.0 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.517242 GCTCCAGCTATGTACATGGC 58.483 55.000 30.63 30.63 44.41 4.40
23 24 3.244105 GCTATGTACATGGCGGCG 58.756 61.111 25.72 0.51 35.64 6.46
24 25 2.954753 GCTATGTACATGGCGGCGC 61.955 63.158 25.72 26.17 35.64 6.53
36 37 3.853330 CGGCGCCATCAACTCGTG 61.853 66.667 28.98 0.98 0.00 4.35
37 38 3.499737 GGCGCCATCAACTCGTGG 61.500 66.667 24.80 0.00 38.55 4.94
38 39 2.742372 GCGCCATCAACTCGTGGT 60.742 61.111 0.00 0.00 37.81 4.16
39 40 1.447140 GCGCCATCAACTCGTGGTA 60.447 57.895 0.00 0.00 37.81 3.25
40 41 1.693083 GCGCCATCAACTCGTGGTAC 61.693 60.000 0.00 0.00 37.81 3.34
41 42 0.108804 CGCCATCAACTCGTGGTACT 60.109 55.000 0.00 0.00 37.81 2.73
42 43 1.641577 GCCATCAACTCGTGGTACTC 58.358 55.000 0.00 0.00 37.81 2.59
43 44 1.204941 GCCATCAACTCGTGGTACTCT 59.795 52.381 0.00 0.00 37.81 3.24
44 45 2.353803 GCCATCAACTCGTGGTACTCTT 60.354 50.000 0.00 0.00 37.81 2.85
45 46 3.254060 CCATCAACTCGTGGTACTCTTG 58.746 50.000 0.00 0.00 0.00 3.02
46 47 3.306088 CCATCAACTCGTGGTACTCTTGT 60.306 47.826 0.00 0.00 0.00 3.16
47 48 3.637998 TCAACTCGTGGTACTCTTGTC 57.362 47.619 0.00 0.00 0.00 3.18
48 49 2.031420 TCAACTCGTGGTACTCTTGTCG 60.031 50.000 0.00 0.00 0.00 4.35
49 50 0.240411 ACTCGTGGTACTCTTGTCGC 59.760 55.000 0.00 0.00 0.00 5.19
50 51 0.522180 CTCGTGGTACTCTTGTCGCT 59.478 55.000 0.00 0.00 0.00 4.93
51 52 1.736126 CTCGTGGTACTCTTGTCGCTA 59.264 52.381 0.00 0.00 0.00 4.26
52 53 2.153645 TCGTGGTACTCTTGTCGCTAA 58.846 47.619 0.00 0.00 0.00 3.09
53 54 2.553602 TCGTGGTACTCTTGTCGCTAAA 59.446 45.455 0.00 0.00 0.00 1.85
54 55 2.660236 CGTGGTACTCTTGTCGCTAAAC 59.340 50.000 0.00 0.00 0.00 2.01
55 56 3.645884 GTGGTACTCTTGTCGCTAAACA 58.354 45.455 0.00 0.00 0.00 2.83
56 57 4.053295 GTGGTACTCTTGTCGCTAAACAA 58.947 43.478 0.00 0.00 37.56 2.83
57 58 4.689345 GTGGTACTCTTGTCGCTAAACAAT 59.311 41.667 0.00 0.00 38.41 2.71
58 59 5.865552 GTGGTACTCTTGTCGCTAAACAATA 59.134 40.000 0.00 0.00 38.41 1.90
59 60 6.034683 GTGGTACTCTTGTCGCTAAACAATAG 59.965 42.308 0.00 7.08 38.41 1.73
60 61 6.071784 TGGTACTCTTGTCGCTAAACAATAGA 60.072 38.462 12.58 2.34 38.41 1.98
61 62 6.979238 GGTACTCTTGTCGCTAAACAATAGAT 59.021 38.462 12.58 4.18 38.41 1.98
62 63 7.491696 GGTACTCTTGTCGCTAAACAATAGATT 59.508 37.037 12.58 1.03 38.41 2.40
63 64 9.512435 GTACTCTTGTCGCTAAACAATAGATTA 57.488 33.333 12.58 0.37 38.41 1.75
90 91 2.504920 TCGAATGTCGAGGGCATCT 58.495 52.632 0.00 0.00 44.82 2.90
91 92 0.385751 TCGAATGTCGAGGGCATCTC 59.614 55.000 0.00 0.00 44.82 2.75
92 93 0.598680 CGAATGTCGAGGGCATCTCC 60.599 60.000 0.00 0.00 43.74 3.71
104 105 3.819564 GGCATCTCCCAATTTTAACCC 57.180 47.619 0.00 0.00 0.00 4.11
105 106 3.374764 GGCATCTCCCAATTTTAACCCT 58.625 45.455 0.00 0.00 0.00 4.34
106 107 3.384789 GGCATCTCCCAATTTTAACCCTC 59.615 47.826 0.00 0.00 0.00 4.30
107 108 4.023291 GCATCTCCCAATTTTAACCCTCA 58.977 43.478 0.00 0.00 0.00 3.86
108 109 4.466015 GCATCTCCCAATTTTAACCCTCAA 59.534 41.667 0.00 0.00 0.00 3.02
109 110 5.129320 GCATCTCCCAATTTTAACCCTCAAT 59.871 40.000 0.00 0.00 0.00 2.57
110 111 6.683861 GCATCTCCCAATTTTAACCCTCAATC 60.684 42.308 0.00 0.00 0.00 2.67
111 112 4.947388 TCTCCCAATTTTAACCCTCAATCG 59.053 41.667 0.00 0.00 0.00 3.34
112 113 4.668636 TCCCAATTTTAACCCTCAATCGT 58.331 39.130 0.00 0.00 0.00 3.73
113 114 5.081032 TCCCAATTTTAACCCTCAATCGTT 58.919 37.500 0.00 0.00 0.00 3.85
114 115 5.184287 TCCCAATTTTAACCCTCAATCGTTC 59.816 40.000 0.00 0.00 0.00 3.95
115 116 5.092781 CCAATTTTAACCCTCAATCGTTCG 58.907 41.667 0.00 0.00 0.00 3.95
116 117 4.957759 ATTTTAACCCTCAATCGTTCGG 57.042 40.909 0.00 0.00 0.00 4.30
117 118 3.681593 TTTAACCCTCAATCGTTCGGA 57.318 42.857 0.00 0.00 0.00 4.55
118 119 2.660189 TAACCCTCAATCGTTCGGAC 57.340 50.000 0.00 0.00 0.00 4.79
119 120 0.036671 AACCCTCAATCGTTCGGACC 60.037 55.000 0.00 0.00 0.00 4.46
120 121 1.518572 CCCTCAATCGTTCGGACCG 60.519 63.158 7.84 7.84 0.00 4.79
121 122 1.509463 CCTCAATCGTTCGGACCGA 59.491 57.895 13.88 13.88 38.89 4.69
122 123 0.525668 CCTCAATCGTTCGGACCGAG 60.526 60.000 17.51 6.75 37.14 4.63
123 124 1.140407 CTCAATCGTTCGGACCGAGC 61.140 60.000 19.74 19.74 37.14 5.03
128 129 3.689411 GTTCGGACCGAGCGATTC 58.311 61.111 17.51 1.64 37.14 2.52
139 140 2.572173 GAGCGATTCGAACACGTTTT 57.428 45.000 21.44 11.71 0.00 2.43
140 141 2.222624 GAGCGATTCGAACACGTTTTG 58.777 47.619 21.44 3.41 0.00 2.44
141 142 0.695410 GCGATTCGAACACGTTTTGC 59.305 50.000 21.44 8.96 0.00 3.68
142 143 1.314581 CGATTCGAACACGTTTTGCC 58.685 50.000 15.33 0.00 0.00 4.52
143 144 1.333347 CGATTCGAACACGTTTTGCCA 60.333 47.619 15.33 0.00 0.00 4.92
144 145 2.664424 CGATTCGAACACGTTTTGCCAT 60.664 45.455 15.33 0.00 0.00 4.40
145 146 2.392933 TTCGAACACGTTTTGCCATC 57.607 45.000 0.00 0.00 0.00 3.51
146 147 0.589223 TCGAACACGTTTTGCCATCC 59.411 50.000 0.00 0.00 0.00 3.51
147 148 0.309302 CGAACACGTTTTGCCATCCA 59.691 50.000 0.00 0.00 0.00 3.41
148 149 1.268794 CGAACACGTTTTGCCATCCAA 60.269 47.619 0.00 0.00 0.00 3.53
149 150 2.124122 GAACACGTTTTGCCATCCAAC 58.876 47.619 0.00 0.00 31.97 3.77
150 151 1.107114 ACACGTTTTGCCATCCAACA 58.893 45.000 0.00 0.00 31.97 3.33
151 152 1.066908 ACACGTTTTGCCATCCAACAG 59.933 47.619 0.00 0.00 31.97 3.16
152 153 1.066908 CACGTTTTGCCATCCAACAGT 59.933 47.619 0.00 0.00 31.97 3.55
153 154 2.292016 CACGTTTTGCCATCCAACAGTA 59.708 45.455 0.00 0.00 31.97 2.74
154 155 2.292292 ACGTTTTGCCATCCAACAGTAC 59.708 45.455 0.00 0.00 31.97 2.73
155 156 2.351350 CGTTTTGCCATCCAACAGTACC 60.351 50.000 0.00 0.00 31.97 3.34
156 157 1.917872 TTTGCCATCCAACAGTACCC 58.082 50.000 0.00 0.00 31.97 3.69
157 158 0.039035 TTGCCATCCAACAGTACCCC 59.961 55.000 0.00 0.00 0.00 4.95
158 159 1.136961 TGCCATCCAACAGTACCCCA 61.137 55.000 0.00 0.00 0.00 4.96
159 160 0.258774 GCCATCCAACAGTACCCCAT 59.741 55.000 0.00 0.00 0.00 4.00
160 161 2.023788 GCCATCCAACAGTACCCCATG 61.024 57.143 0.00 0.00 0.00 3.66
161 162 1.410083 CCATCCAACAGTACCCCATGG 60.410 57.143 4.14 4.14 37.80 3.66
162 163 1.563879 CATCCAACAGTACCCCATGGA 59.436 52.381 15.22 9.03 43.79 3.41
163 164 1.979809 TCCAACAGTACCCCATGGAT 58.020 50.000 15.22 3.13 35.33 3.41
164 165 1.843851 TCCAACAGTACCCCATGGATC 59.156 52.381 15.22 0.13 35.33 3.36
165 166 1.133792 CCAACAGTACCCCATGGATCC 60.134 57.143 15.22 4.20 32.82 3.36
166 167 0.837272 AACAGTACCCCATGGATCCG 59.163 55.000 15.22 0.00 34.81 4.18
167 168 1.071471 CAGTACCCCATGGATCCGC 59.929 63.158 15.22 0.00 34.81 5.54
168 169 2.030562 GTACCCCATGGATCCGCG 59.969 66.667 15.22 0.00 34.81 6.46
169 170 3.238497 TACCCCATGGATCCGCGG 61.238 66.667 22.12 22.12 34.81 6.46
170 171 3.759910 TACCCCATGGATCCGCGGA 62.760 63.158 33.12 33.12 34.81 5.54
171 172 4.626081 CCCCATGGATCCGCGGAC 62.626 72.222 33.75 23.36 0.00 4.79
172 173 3.860605 CCCATGGATCCGCGGACA 61.861 66.667 33.75 25.65 0.00 4.02
173 174 2.280389 CCATGGATCCGCGGACAG 60.280 66.667 33.75 17.82 0.00 3.51
174 175 2.280389 CATGGATCCGCGGACAGG 60.280 66.667 33.75 22.86 0.00 4.00
175 176 4.241555 ATGGATCCGCGGACAGGC 62.242 66.667 33.75 19.60 0.00 4.85
186 187 4.864334 GACAGGCCCGGGCATCTG 62.864 72.222 44.46 39.78 44.11 2.90
188 189 4.431131 CAGGCCCGGGCATCTGTT 62.431 66.667 44.46 20.43 44.11 3.16
189 190 3.661648 AGGCCCGGGCATCTGTTT 61.662 61.111 44.46 18.64 44.11 2.83
190 191 2.679996 GGCCCGGGCATCTGTTTT 60.680 61.111 44.46 0.00 44.11 2.43
191 192 2.710902 GGCCCGGGCATCTGTTTTC 61.711 63.158 44.46 21.84 44.11 2.29
192 193 1.678970 GCCCGGGCATCTGTTTTCT 60.679 57.895 40.73 0.00 41.49 2.52
193 194 1.250840 GCCCGGGCATCTGTTTTCTT 61.251 55.000 40.73 0.00 41.49 2.52
194 195 0.527565 CCCGGGCATCTGTTTTCTTG 59.472 55.000 8.08 0.00 0.00 3.02
195 196 1.247567 CCGGGCATCTGTTTTCTTGT 58.752 50.000 0.00 0.00 0.00 3.16
196 197 2.432444 CCGGGCATCTGTTTTCTTGTA 58.568 47.619 0.00 0.00 0.00 2.41
197 198 2.817258 CCGGGCATCTGTTTTCTTGTAA 59.183 45.455 0.00 0.00 0.00 2.41
198 199 3.254657 CCGGGCATCTGTTTTCTTGTAAA 59.745 43.478 0.00 0.00 0.00 2.01
199 200 4.082245 CCGGGCATCTGTTTTCTTGTAAAT 60.082 41.667 0.00 0.00 0.00 1.40
200 201 5.095490 CGGGCATCTGTTTTCTTGTAAATC 58.905 41.667 0.00 0.00 0.00 2.17
201 202 5.095490 GGGCATCTGTTTTCTTGTAAATCG 58.905 41.667 0.00 0.00 0.00 3.34
202 203 5.095490 GGCATCTGTTTTCTTGTAAATCGG 58.905 41.667 0.00 0.00 0.00 4.18
203 204 5.106317 GGCATCTGTTTTCTTGTAAATCGGA 60.106 40.000 0.00 0.00 0.00 4.55
204 205 6.378582 GCATCTGTTTTCTTGTAAATCGGAA 58.621 36.000 0.00 0.00 0.00 4.30
205 206 6.524586 GCATCTGTTTTCTTGTAAATCGGAAG 59.475 38.462 0.00 0.00 0.00 3.46
206 207 5.997385 TCTGTTTTCTTGTAAATCGGAAGC 58.003 37.500 0.00 0.00 0.00 3.86
207 208 5.529430 TCTGTTTTCTTGTAAATCGGAAGCA 59.471 36.000 0.00 0.00 0.00 3.91
208 209 6.038825 TCTGTTTTCTTGTAAATCGGAAGCAA 59.961 34.615 0.00 0.00 0.00 3.91
209 210 6.565234 TGTTTTCTTGTAAATCGGAAGCAAA 58.435 32.000 0.00 0.00 0.00 3.68
210 211 6.474102 TGTTTTCTTGTAAATCGGAAGCAAAC 59.526 34.615 0.00 0.00 35.04 2.93
211 212 6.385649 TTTCTTGTAAATCGGAAGCAAACT 57.614 33.333 0.00 0.00 0.00 2.66
212 213 7.499321 TTTCTTGTAAATCGGAAGCAAACTA 57.501 32.000 0.00 0.00 0.00 2.24
213 214 6.721571 TCTTGTAAATCGGAAGCAAACTAG 57.278 37.500 0.00 0.00 0.00 2.57
214 215 5.642063 TCTTGTAAATCGGAAGCAAACTAGG 59.358 40.000 0.00 0.00 0.00 3.02
215 216 4.258543 TGTAAATCGGAAGCAAACTAGGG 58.741 43.478 0.00 0.00 0.00 3.53
216 217 2.420058 AATCGGAAGCAAACTAGGGG 57.580 50.000 0.00 0.00 0.00 4.79
217 218 0.546598 ATCGGAAGCAAACTAGGGGG 59.453 55.000 0.00 0.00 0.00 5.40
231 232 4.666105 GGGGGATTTGCAGGAGTC 57.334 61.111 0.00 0.00 0.00 3.36
232 233 1.691219 GGGGGATTTGCAGGAGTCA 59.309 57.895 0.00 0.00 0.00 3.41
233 234 0.039618 GGGGGATTTGCAGGAGTCAA 59.960 55.000 0.00 0.00 0.00 3.18
234 235 1.467920 GGGGATTTGCAGGAGTCAAG 58.532 55.000 0.00 0.00 0.00 3.02
235 236 1.004745 GGGGATTTGCAGGAGTCAAGA 59.995 52.381 0.00 0.00 0.00 3.02
236 237 2.087646 GGGATTTGCAGGAGTCAAGAC 58.912 52.381 0.00 0.00 0.00 3.01
237 238 2.087646 GGATTTGCAGGAGTCAAGACC 58.912 52.381 0.00 0.00 0.00 3.85
238 239 1.734465 GATTTGCAGGAGTCAAGACCG 59.266 52.381 0.00 0.00 0.00 4.79
239 240 0.884704 TTTGCAGGAGTCAAGACCGC 60.885 55.000 0.00 0.00 0.00 5.68
240 241 2.435059 GCAGGAGTCAAGACCGCC 60.435 66.667 0.00 0.00 0.00 6.13
241 242 3.059982 CAGGAGTCAAGACCGCCA 58.940 61.111 10.95 0.00 0.00 5.69
242 243 1.374758 CAGGAGTCAAGACCGCCAC 60.375 63.158 10.95 0.00 0.00 5.01
243 244 2.047179 GGAGTCAAGACCGCCACC 60.047 66.667 0.00 0.00 0.00 4.61
244 245 2.741092 GAGTCAAGACCGCCACCA 59.259 61.111 0.00 0.00 0.00 4.17
245 246 1.668151 GAGTCAAGACCGCCACCAC 60.668 63.158 0.00 0.00 0.00 4.16
246 247 3.041940 GTCAAGACCGCCACCACG 61.042 66.667 0.00 0.00 0.00 4.94
247 248 3.542676 TCAAGACCGCCACCACGT 61.543 61.111 0.00 0.00 0.00 4.49
248 249 2.201708 TCAAGACCGCCACCACGTA 61.202 57.895 0.00 0.00 0.00 3.57
249 250 1.736645 CAAGACCGCCACCACGTAG 60.737 63.158 0.00 0.00 0.00 3.51
250 251 2.939261 AAGACCGCCACCACGTAGG 61.939 63.158 0.00 0.00 45.67 3.18
251 252 3.376078 GACCGCCACCACGTAGGA 61.376 66.667 10.46 0.00 41.22 2.94
252 253 3.352338 GACCGCCACCACGTAGGAG 62.352 68.421 10.46 4.64 41.22 3.69
253 254 3.379445 CCGCCACCACGTAGGAGT 61.379 66.667 10.46 0.00 41.22 3.85
254 255 2.181021 CGCCACCACGTAGGAGTC 59.819 66.667 10.46 0.00 41.22 3.36
255 256 2.341101 CGCCACCACGTAGGAGTCT 61.341 63.158 10.46 0.00 41.22 3.24
256 257 1.215647 GCCACCACGTAGGAGTCTG 59.784 63.158 10.46 0.00 41.22 3.51
257 258 1.248785 GCCACCACGTAGGAGTCTGA 61.249 60.000 10.46 0.00 41.22 3.27
258 259 0.526662 CCACCACGTAGGAGTCTGAC 59.473 60.000 10.46 0.00 41.22 3.51
259 260 1.244816 CACCACGTAGGAGTCTGACA 58.755 55.000 10.88 0.00 41.22 3.58
260 261 1.068472 CACCACGTAGGAGTCTGACAC 60.068 57.143 10.88 3.38 41.22 3.67
261 262 0.526662 CCACGTAGGAGTCTGACACC 59.473 60.000 15.40 15.40 41.22 4.16
262 263 1.535833 CACGTAGGAGTCTGACACCT 58.464 55.000 26.21 26.21 42.01 4.00
263 264 1.469308 CACGTAGGAGTCTGACACCTC 59.531 57.143 26.65 17.66 38.52 3.85
264 265 1.096416 CGTAGGAGTCTGACACCTCC 58.904 60.000 26.65 16.70 46.34 4.30
267 268 1.594310 GGAGTCTGACACCTCCAGC 59.406 63.158 15.83 0.00 45.47 4.85
268 269 0.902516 GGAGTCTGACACCTCCAGCT 60.903 60.000 15.83 0.00 45.47 4.24
269 270 0.530288 GAGTCTGACACCTCCAGCTC 59.470 60.000 10.88 0.00 32.31 4.09
270 271 0.178950 AGTCTGACACCTCCAGCTCA 60.179 55.000 10.88 0.00 0.00 4.26
271 272 0.037790 GTCTGACACCTCCAGCTCAC 60.038 60.000 2.24 0.00 0.00 3.51
272 273 1.188219 TCTGACACCTCCAGCTCACC 61.188 60.000 0.00 0.00 0.00 4.02
273 274 2.177594 CTGACACCTCCAGCTCACCC 62.178 65.000 0.00 0.00 0.00 4.61
274 275 2.122413 ACACCTCCAGCTCACCCA 60.122 61.111 0.00 0.00 0.00 4.51
275 276 1.768684 GACACCTCCAGCTCACCCAA 61.769 60.000 0.00 0.00 0.00 4.12
276 277 1.352622 ACACCTCCAGCTCACCCAAA 61.353 55.000 0.00 0.00 0.00 3.28
277 278 0.178992 CACCTCCAGCTCACCCAAAA 60.179 55.000 0.00 0.00 0.00 2.44
278 279 0.555769 ACCTCCAGCTCACCCAAAAA 59.444 50.000 0.00 0.00 0.00 1.94
279 280 0.961753 CCTCCAGCTCACCCAAAAAC 59.038 55.000 0.00 0.00 0.00 2.43
280 281 0.961753 CTCCAGCTCACCCAAAAACC 59.038 55.000 0.00 0.00 0.00 3.27
281 282 0.469144 TCCAGCTCACCCAAAAACCC 60.469 55.000 0.00 0.00 0.00 4.11
282 283 0.469892 CCAGCTCACCCAAAAACCCT 60.470 55.000 0.00 0.00 0.00 4.34
283 284 0.961753 CAGCTCACCCAAAAACCCTC 59.038 55.000 0.00 0.00 0.00 4.30
284 285 0.178961 AGCTCACCCAAAAACCCTCC 60.179 55.000 0.00 0.00 0.00 4.30
285 286 1.185618 GCTCACCCAAAAACCCTCCC 61.186 60.000 0.00 0.00 0.00 4.30
286 287 0.482887 CTCACCCAAAAACCCTCCCT 59.517 55.000 0.00 0.00 0.00 4.20
287 288 0.187361 TCACCCAAAAACCCTCCCTG 59.813 55.000 0.00 0.00 0.00 4.45
288 289 0.187361 CACCCAAAAACCCTCCCTGA 59.813 55.000 0.00 0.00 0.00 3.86
289 290 0.187606 ACCCAAAAACCCTCCCTGAC 59.812 55.000 0.00 0.00 0.00 3.51
290 291 0.541998 CCCAAAAACCCTCCCTGACC 60.542 60.000 0.00 0.00 0.00 4.02
291 292 0.482887 CCAAAAACCCTCCCTGACCT 59.517 55.000 0.00 0.00 0.00 3.85
292 293 1.133167 CCAAAAACCCTCCCTGACCTT 60.133 52.381 0.00 0.00 0.00 3.50
293 294 1.963515 CAAAAACCCTCCCTGACCTTG 59.036 52.381 0.00 0.00 0.00 3.61
294 295 1.231963 AAAACCCTCCCTGACCTTGT 58.768 50.000 0.00 0.00 0.00 3.16
295 296 0.478507 AAACCCTCCCTGACCTTGTG 59.521 55.000 0.00 0.00 0.00 3.33
296 297 0.697854 AACCCTCCCTGACCTTGTGT 60.698 55.000 0.00 0.00 0.00 3.72
297 298 1.128188 ACCCTCCCTGACCTTGTGTC 61.128 60.000 0.00 0.00 44.72 3.67
298 299 0.838122 CCCTCCCTGACCTTGTGTCT 60.838 60.000 0.00 0.00 44.75 3.41
299 300 0.610687 CCTCCCTGACCTTGTGTCTC 59.389 60.000 0.00 0.00 44.75 3.36
300 301 0.610687 CTCCCTGACCTTGTGTCTCC 59.389 60.000 0.00 0.00 44.75 3.71
301 302 0.105194 TCCCTGACCTTGTGTCTCCA 60.105 55.000 0.00 0.00 44.75 3.86
302 303 0.987294 CCCTGACCTTGTGTCTCCAT 59.013 55.000 0.00 0.00 44.75 3.41
303 304 1.065854 CCCTGACCTTGTGTCTCCATC 60.066 57.143 0.00 0.00 44.75 3.51
304 305 1.065854 CCTGACCTTGTGTCTCCATCC 60.066 57.143 0.00 0.00 44.75 3.51
305 306 1.905215 CTGACCTTGTGTCTCCATCCT 59.095 52.381 0.00 0.00 44.75 3.24
306 307 2.304180 CTGACCTTGTGTCTCCATCCTT 59.696 50.000 0.00 0.00 44.75 3.36
307 308 2.303022 TGACCTTGTGTCTCCATCCTTC 59.697 50.000 0.00 0.00 44.75 3.46
308 309 1.630878 ACCTTGTGTCTCCATCCTTCC 59.369 52.381 0.00 0.00 0.00 3.46
309 310 1.065126 CCTTGTGTCTCCATCCTTCCC 60.065 57.143 0.00 0.00 0.00 3.97
310 311 1.912043 CTTGTGTCTCCATCCTTCCCT 59.088 52.381 0.00 0.00 0.00 4.20
311 312 2.044793 TGTGTCTCCATCCTTCCCTT 57.955 50.000 0.00 0.00 0.00 3.95
312 313 2.348472 TGTGTCTCCATCCTTCCCTTT 58.652 47.619 0.00 0.00 0.00 3.11
313 314 2.716424 TGTGTCTCCATCCTTCCCTTTT 59.284 45.455 0.00 0.00 0.00 2.27
314 315 3.140144 TGTGTCTCCATCCTTCCCTTTTT 59.860 43.478 0.00 0.00 0.00 1.94
315 316 3.759086 GTGTCTCCATCCTTCCCTTTTTC 59.241 47.826 0.00 0.00 0.00 2.29
316 317 3.397618 TGTCTCCATCCTTCCCTTTTTCA 59.602 43.478 0.00 0.00 0.00 2.69
317 318 4.141041 TGTCTCCATCCTTCCCTTTTTCAA 60.141 41.667 0.00 0.00 0.00 2.69
318 319 5.019470 GTCTCCATCCTTCCCTTTTTCAAT 58.981 41.667 0.00 0.00 0.00 2.57
319 320 5.018809 TCTCCATCCTTCCCTTTTTCAATG 58.981 41.667 0.00 0.00 0.00 2.82
320 321 3.515104 TCCATCCTTCCCTTTTTCAATGC 59.485 43.478 0.00 0.00 0.00 3.56
321 322 3.261390 CCATCCTTCCCTTTTTCAATGCA 59.739 43.478 0.00 0.00 0.00 3.96
322 323 4.080751 CCATCCTTCCCTTTTTCAATGCAT 60.081 41.667 0.00 0.00 0.00 3.96
323 324 4.806640 TCCTTCCCTTTTTCAATGCATC 57.193 40.909 0.00 0.00 0.00 3.91
324 325 3.515104 TCCTTCCCTTTTTCAATGCATCC 59.485 43.478 0.00 0.00 0.00 3.51
325 326 3.514645 CTTCCCTTTTTCAATGCATCCG 58.485 45.455 0.00 0.00 0.00 4.18
326 327 1.204467 TCCCTTTTTCAATGCATCCGC 59.796 47.619 0.00 0.00 39.24 5.54
327 328 1.205417 CCCTTTTTCAATGCATCCGCT 59.795 47.619 0.00 0.00 39.64 5.52
328 329 2.354003 CCCTTTTTCAATGCATCCGCTT 60.354 45.455 0.00 0.00 39.64 4.68
329 330 2.925563 CCTTTTTCAATGCATCCGCTTC 59.074 45.455 0.00 0.00 39.64 3.86
330 331 3.577667 CTTTTTCAATGCATCCGCTTCA 58.422 40.909 0.00 0.00 39.64 3.02
331 332 3.872511 TTTTCAATGCATCCGCTTCAT 57.127 38.095 0.00 0.00 39.64 2.57
332 333 3.425577 TTTCAATGCATCCGCTTCATC 57.574 42.857 0.00 0.00 39.64 2.92
333 334 1.311859 TCAATGCATCCGCTTCATCC 58.688 50.000 0.00 0.00 39.64 3.51
334 335 0.313043 CAATGCATCCGCTTCATCCC 59.687 55.000 0.00 0.00 39.64 3.85
335 336 0.184451 AATGCATCCGCTTCATCCCT 59.816 50.000 0.00 0.00 39.64 4.20
336 337 0.250640 ATGCATCCGCTTCATCCCTC 60.251 55.000 0.00 0.00 39.64 4.30
337 338 1.146930 GCATCCGCTTCATCCCTCA 59.853 57.895 0.00 0.00 34.30 3.86
338 339 1.162800 GCATCCGCTTCATCCCTCAC 61.163 60.000 0.00 0.00 34.30 3.51
339 340 0.533755 CATCCGCTTCATCCCTCACC 60.534 60.000 0.00 0.00 0.00 4.02
340 341 0.982852 ATCCGCTTCATCCCTCACCA 60.983 55.000 0.00 0.00 0.00 4.17
341 342 1.153289 CCGCTTCATCCCTCACCAG 60.153 63.158 0.00 0.00 0.00 4.00
342 343 1.817099 CGCTTCATCCCTCACCAGC 60.817 63.158 0.00 0.00 0.00 4.85
343 344 1.817099 GCTTCATCCCTCACCAGCG 60.817 63.158 0.00 0.00 0.00 5.18
344 345 1.599047 CTTCATCCCTCACCAGCGT 59.401 57.895 0.00 0.00 0.00 5.07
345 346 0.036010 CTTCATCCCTCACCAGCGTT 60.036 55.000 0.00 0.00 0.00 4.84
346 347 0.321564 TTCATCCCTCACCAGCGTTG 60.322 55.000 0.00 0.00 0.00 4.10
347 348 1.003355 CATCCCTCACCAGCGTTGT 60.003 57.895 0.00 0.00 0.00 3.32
348 349 1.021390 CATCCCTCACCAGCGTTGTC 61.021 60.000 0.00 0.00 0.00 3.18
349 350 2.507110 ATCCCTCACCAGCGTTGTCG 62.507 60.000 0.00 0.00 40.37 4.35
350 351 2.338620 CCTCACCAGCGTTGTCGA 59.661 61.111 0.00 0.00 39.71 4.20
351 352 1.079819 CCTCACCAGCGTTGTCGAT 60.080 57.895 0.00 0.00 39.71 3.59
357 358 3.116073 CAGCGTTGTCGATGTACCA 57.884 52.632 0.00 0.00 46.37 3.25
358 359 0.713883 CAGCGTTGTCGATGTACCAC 59.286 55.000 0.00 0.00 46.37 4.16
359 360 0.389426 AGCGTTGTCGATGTACCACC 60.389 55.000 0.00 0.00 39.71 4.61
360 361 1.356527 GCGTTGTCGATGTACCACCC 61.357 60.000 0.00 0.00 39.71 4.61
361 362 0.245539 CGTTGTCGATGTACCACCCT 59.754 55.000 0.00 0.00 39.71 4.34
362 363 1.722011 GTTGTCGATGTACCACCCTG 58.278 55.000 0.00 0.00 0.00 4.45
363 364 0.611200 TTGTCGATGTACCACCCTGG 59.389 55.000 0.00 0.00 45.02 4.45
364 365 1.153429 GTCGATGTACCACCCTGGC 60.153 63.158 0.00 0.00 42.67 4.85
365 366 2.189521 CGATGTACCACCCTGGCC 59.810 66.667 0.00 0.00 42.67 5.36
366 367 2.189521 GATGTACCACCCTGGCCG 59.810 66.667 0.00 0.00 42.67 6.13
367 368 2.609610 ATGTACCACCCTGGCCGT 60.610 61.111 0.00 0.00 42.67 5.68
368 369 2.588856 GATGTACCACCCTGGCCGTC 62.589 65.000 0.00 0.00 42.67 4.79
369 370 3.001406 GTACCACCCTGGCCGTCT 61.001 66.667 0.00 0.00 42.67 4.18
370 371 3.000819 TACCACCCTGGCCGTCTG 61.001 66.667 0.00 0.00 42.67 3.51
381 382 3.710722 CCGTCTGCCAAGCCCTCT 61.711 66.667 0.00 0.00 0.00 3.69
382 383 2.125350 CGTCTGCCAAGCCCTCTC 60.125 66.667 0.00 0.00 0.00 3.20
383 384 2.125350 GTCTGCCAAGCCCTCTCG 60.125 66.667 0.00 0.00 0.00 4.04
384 385 2.283894 TCTGCCAAGCCCTCTCGA 60.284 61.111 0.00 0.00 0.00 4.04
385 386 1.913262 TCTGCCAAGCCCTCTCGAA 60.913 57.895 0.00 0.00 0.00 3.71
386 387 1.743252 CTGCCAAGCCCTCTCGAAC 60.743 63.158 0.00 0.00 0.00 3.95
387 388 2.177594 CTGCCAAGCCCTCTCGAACT 62.178 60.000 0.00 0.00 0.00 3.01
388 389 1.003233 GCCAAGCCCTCTCGAACTT 60.003 57.895 0.00 0.00 0.00 2.66
389 390 1.021920 GCCAAGCCCTCTCGAACTTC 61.022 60.000 0.00 0.00 0.00 3.01
390 391 0.391793 CCAAGCCCTCTCGAACTTCC 60.392 60.000 0.00 0.00 0.00 3.46
391 392 0.737715 CAAGCCCTCTCGAACTTCCG 60.738 60.000 0.00 0.00 0.00 4.30
392 393 2.508586 AAGCCCTCTCGAACTTCCGC 62.509 60.000 0.00 0.00 0.00 5.54
393 394 3.007973 GCCCTCTCGAACTTCCGCT 62.008 63.158 0.00 0.00 0.00 5.52
394 395 1.664321 GCCCTCTCGAACTTCCGCTA 61.664 60.000 0.00 0.00 0.00 4.26
395 396 0.100861 CCCTCTCGAACTTCCGCTAC 59.899 60.000 0.00 0.00 0.00 3.58
396 397 0.100861 CCTCTCGAACTTCCGCTACC 59.899 60.000 0.00 0.00 0.00 3.18
397 398 1.096416 CTCTCGAACTTCCGCTACCT 58.904 55.000 0.00 0.00 0.00 3.08
398 399 1.064357 CTCTCGAACTTCCGCTACCTC 59.936 57.143 0.00 0.00 0.00 3.85
399 400 0.100861 CTCGAACTTCCGCTACCTCC 59.899 60.000 0.00 0.00 0.00 4.30
400 401 0.609957 TCGAACTTCCGCTACCTCCA 60.610 55.000 0.00 0.00 0.00 3.86
401 402 0.458025 CGAACTTCCGCTACCTCCAC 60.458 60.000 0.00 0.00 0.00 4.02
402 403 0.108281 GAACTTCCGCTACCTCCACC 60.108 60.000 0.00 0.00 0.00 4.61
403 404 1.885163 AACTTCCGCTACCTCCACCG 61.885 60.000 0.00 0.00 0.00 4.94
404 405 3.718210 CTTCCGCTACCTCCACCGC 62.718 68.421 0.00 0.00 0.00 5.68
405 406 4.753662 TCCGCTACCTCCACCGCT 62.754 66.667 0.00 0.00 0.00 5.52
406 407 2.831742 CCGCTACCTCCACCGCTA 60.832 66.667 0.00 0.00 0.00 4.26
407 408 2.412112 CGCTACCTCCACCGCTAC 59.588 66.667 0.00 0.00 0.00 3.58
408 409 2.412323 CGCTACCTCCACCGCTACA 61.412 63.158 0.00 0.00 0.00 2.74
409 410 1.141234 GCTACCTCCACCGCTACAC 59.859 63.158 0.00 0.00 0.00 2.90
410 411 1.814527 CTACCTCCACCGCTACACC 59.185 63.158 0.00 0.00 0.00 4.16
411 412 1.673808 CTACCTCCACCGCTACACCC 61.674 65.000 0.00 0.00 0.00 4.61
412 413 2.444004 TACCTCCACCGCTACACCCA 62.444 60.000 0.00 0.00 0.00 4.51
413 414 2.579201 CTCCACCGCTACACCCAG 59.421 66.667 0.00 0.00 0.00 4.45
414 415 2.203728 TCCACCGCTACACCCAGT 60.204 61.111 0.00 0.00 0.00 4.00
415 416 2.227089 CTCCACCGCTACACCCAGTC 62.227 65.000 0.00 0.00 0.00 3.51
416 417 2.579657 CCACCGCTACACCCAGTCA 61.580 63.158 0.00 0.00 0.00 3.41
417 418 1.369692 CACCGCTACACCCAGTCAA 59.630 57.895 0.00 0.00 0.00 3.18
418 419 0.250124 CACCGCTACACCCAGTCAAA 60.250 55.000 0.00 0.00 0.00 2.69
419 420 0.250166 ACCGCTACACCCAGTCAAAC 60.250 55.000 0.00 0.00 0.00 2.93
420 421 0.250124 CCGCTACACCCAGTCAAACA 60.250 55.000 0.00 0.00 0.00 2.83
421 422 0.865769 CGCTACACCCAGTCAAACAC 59.134 55.000 0.00 0.00 0.00 3.32
422 423 0.865769 GCTACACCCAGTCAAACACG 59.134 55.000 0.00 0.00 0.00 4.49
423 424 0.865769 CTACACCCAGTCAAACACGC 59.134 55.000 0.00 0.00 0.00 5.34
424 425 0.533308 TACACCCAGTCAAACACGCC 60.533 55.000 0.00 0.00 0.00 5.68
425 426 2.590575 ACCCAGTCAAACACGCCG 60.591 61.111 0.00 0.00 0.00 6.46
426 427 2.590575 CCCAGTCAAACACGCCGT 60.591 61.111 0.00 0.00 0.00 5.68
427 428 2.184167 CCCAGTCAAACACGCCGTT 61.184 57.895 0.00 0.00 40.50 4.44
433 434 4.228899 AAACACGCCGTTTGTCCT 57.771 50.000 2.98 0.00 46.22 3.85
434 435 2.019337 AAACACGCCGTTTGTCCTC 58.981 52.632 2.98 0.00 46.22 3.71
435 436 1.441732 AAACACGCCGTTTGTCCTCC 61.442 55.000 2.98 0.00 46.22 4.30
436 437 3.411351 CACGCCGTTTGTCCTCCG 61.411 66.667 0.00 0.00 0.00 4.63
440 441 2.046314 CCGTTTGTCCTCCGCCAT 60.046 61.111 0.00 0.00 0.00 4.40
441 442 2.398554 CCGTTTGTCCTCCGCCATG 61.399 63.158 0.00 0.00 0.00 3.66
442 443 2.398554 CGTTTGTCCTCCGCCATGG 61.399 63.158 7.63 7.63 40.09 3.66
443 444 2.046285 GTTTGTCCTCCGCCATGGG 61.046 63.158 15.13 3.37 38.76 4.00
444 445 2.534396 TTTGTCCTCCGCCATGGGT 61.534 57.895 15.13 0.00 38.76 4.51
445 446 2.478335 TTTGTCCTCCGCCATGGGTC 62.478 60.000 15.13 0.00 38.76 4.46
446 447 4.176752 GTCCTCCGCCATGGGTCC 62.177 72.222 15.13 0.00 38.76 4.46
447 448 4.731853 TCCTCCGCCATGGGTCCA 62.732 66.667 15.13 0.00 38.76 4.02
448 449 4.489771 CCTCCGCCATGGGTCCAC 62.490 72.222 15.13 0.00 38.76 4.02
449 450 3.716195 CTCCGCCATGGGTCCACA 61.716 66.667 15.13 0.00 38.76 4.17
450 451 3.014538 TCCGCCATGGGTCCACAT 61.015 61.111 15.13 0.00 38.76 3.21
451 452 2.516930 CCGCCATGGGTCCACATC 60.517 66.667 15.13 0.00 0.00 3.06
452 453 2.591753 CGCCATGGGTCCACATCT 59.408 61.111 15.13 0.00 0.00 2.90
453 454 1.524621 CGCCATGGGTCCACATCTC 60.525 63.158 15.13 0.00 0.00 2.75
454 455 1.524621 GCCATGGGTCCACATCTCG 60.525 63.158 15.13 0.00 0.00 4.04
455 456 1.146930 CCATGGGTCCACATCTCGG 59.853 63.158 2.85 0.00 0.00 4.63
456 457 1.626356 CCATGGGTCCACATCTCGGT 61.626 60.000 2.85 0.00 0.00 4.69
457 458 0.462581 CATGGGTCCACATCTCGGTG 60.463 60.000 0.00 0.00 38.52 4.94
458 459 0.909610 ATGGGTCCACATCTCGGTGT 60.910 55.000 0.00 0.00 37.06 4.16
459 460 1.125093 TGGGTCCACATCTCGGTGTT 61.125 55.000 0.00 0.00 37.06 3.32
460 461 0.899720 GGGTCCACATCTCGGTGTTA 59.100 55.000 0.00 0.00 37.06 2.41
461 462 1.276989 GGGTCCACATCTCGGTGTTAA 59.723 52.381 0.00 0.00 37.06 2.01
462 463 2.289819 GGGTCCACATCTCGGTGTTAAA 60.290 50.000 0.00 0.00 37.06 1.52
463 464 3.404899 GGTCCACATCTCGGTGTTAAAA 58.595 45.455 0.00 0.00 37.06 1.52
464 465 3.816523 GGTCCACATCTCGGTGTTAAAAA 59.183 43.478 0.00 0.00 37.06 1.94
487 488 5.382664 AAAAACAAACCTACCCTCTCTCA 57.617 39.130 0.00 0.00 0.00 3.27
488 489 5.382664 AAAACAAACCTACCCTCTCTCAA 57.617 39.130 0.00 0.00 0.00 3.02
489 490 5.382664 AAACAAACCTACCCTCTCTCAAA 57.617 39.130 0.00 0.00 0.00 2.69
490 491 5.382664 AACAAACCTACCCTCTCTCAAAA 57.617 39.130 0.00 0.00 0.00 2.44
491 492 5.382664 ACAAACCTACCCTCTCTCAAAAA 57.617 39.130 0.00 0.00 0.00 1.94
529 530 3.982576 AAAAACACAAACCTCTAGCCG 57.017 42.857 0.00 0.00 0.00 5.52
530 531 1.892209 AAACACAAACCTCTAGCCGG 58.108 50.000 0.00 0.00 0.00 6.13
531 532 0.036306 AACACAAACCTCTAGCCGGG 59.964 55.000 2.18 0.00 0.00 5.73
532 533 1.745489 CACAAACCTCTAGCCGGGC 60.745 63.158 12.11 12.11 0.00 6.13
533 534 2.124695 CAAACCTCTAGCCGGGCC 60.125 66.667 17.02 0.00 0.00 5.80
534 535 2.285442 AAACCTCTAGCCGGGCCT 60.285 61.111 17.02 5.78 0.00 5.19
535 536 2.368011 AAACCTCTAGCCGGGCCTC 61.368 63.158 17.02 0.00 0.00 4.70
537 538 4.896829 CCTCTAGCCGGGCCTCGA 62.897 72.222 17.02 8.81 42.43 4.04
538 539 2.833582 CTCTAGCCGGGCCTCGAA 60.834 66.667 17.02 0.00 42.43 3.71
539 540 2.123425 TCTAGCCGGGCCTCGAAT 60.123 61.111 17.02 0.00 42.43 3.34
540 541 2.148558 CTCTAGCCGGGCCTCGAATC 62.149 65.000 17.02 4.38 42.43 2.52
541 542 2.123425 TAGCCGGGCCTCGAATCT 60.123 61.111 17.02 10.34 42.43 2.40
542 543 2.148558 CTAGCCGGGCCTCGAATCTC 62.149 65.000 17.02 0.25 42.43 2.75
543 544 2.921853 TAGCCGGGCCTCGAATCTCA 62.922 60.000 17.02 0.00 42.43 3.27
544 545 2.419198 CCGGGCCTCGAATCTCAG 59.581 66.667 14.30 0.00 42.43 3.35
545 546 2.279784 CGGGCCTCGAATCTCAGC 60.280 66.667 0.84 0.00 42.43 4.26
546 547 2.110006 GGGCCTCGAATCTCAGCC 59.890 66.667 0.84 0.00 43.09 4.85
547 548 2.110006 GGCCTCGAATCTCAGCCC 59.890 66.667 0.00 0.00 37.66 5.19
548 549 2.735772 GGCCTCGAATCTCAGCCCA 61.736 63.158 0.00 0.00 37.66 5.36
549 550 1.221840 GCCTCGAATCTCAGCCCAA 59.778 57.895 0.00 0.00 0.00 4.12
550 551 1.092345 GCCTCGAATCTCAGCCCAAC 61.092 60.000 0.00 0.00 0.00 3.77
551 552 0.250234 CCTCGAATCTCAGCCCAACA 59.750 55.000 0.00 0.00 0.00 3.33
552 553 1.363744 CTCGAATCTCAGCCCAACAC 58.636 55.000 0.00 0.00 0.00 3.32
553 554 0.036388 TCGAATCTCAGCCCAACACC 60.036 55.000 0.00 0.00 0.00 4.16
554 555 0.321564 CGAATCTCAGCCCAACACCA 60.322 55.000 0.00 0.00 0.00 4.17
555 556 1.168714 GAATCTCAGCCCAACACCAC 58.831 55.000 0.00 0.00 0.00 4.16
556 557 0.606401 AATCTCAGCCCAACACCACG 60.606 55.000 0.00 0.00 0.00 4.94
557 558 3.357079 CTCAGCCCAACACCACGC 61.357 66.667 0.00 0.00 0.00 5.34
558 559 3.832237 CTCAGCCCAACACCACGCT 62.832 63.158 0.00 0.00 0.00 5.07
559 560 2.031919 CAGCCCAACACCACGCTA 59.968 61.111 0.00 0.00 0.00 4.26
560 561 1.377202 CAGCCCAACACCACGCTAT 60.377 57.895 0.00 0.00 0.00 2.97
561 562 1.078426 AGCCCAACACCACGCTATC 60.078 57.895 0.00 0.00 0.00 2.08
562 563 2.461110 GCCCAACACCACGCTATCG 61.461 63.158 0.00 0.00 42.43 2.92
563 564 1.216977 CCCAACACCACGCTATCGA 59.783 57.895 0.00 0.00 39.41 3.59
564 565 0.806102 CCCAACACCACGCTATCGAG 60.806 60.000 0.00 0.00 39.41 4.04
565 566 0.172578 CCAACACCACGCTATCGAGA 59.827 55.000 0.00 0.00 39.41 4.04
566 567 1.403647 CCAACACCACGCTATCGAGAA 60.404 52.381 0.00 0.00 39.41 2.87
567 568 2.333926 CAACACCACGCTATCGAGAAA 58.666 47.619 0.00 0.00 39.41 2.52
568 569 2.734606 CAACACCACGCTATCGAGAAAA 59.265 45.455 0.00 0.00 39.41 2.29
569 570 3.247006 ACACCACGCTATCGAGAAAAT 57.753 42.857 0.00 0.00 39.41 1.82
570 571 4.380841 ACACCACGCTATCGAGAAAATA 57.619 40.909 0.00 0.00 39.41 1.40
571 572 4.751060 ACACCACGCTATCGAGAAAATAA 58.249 39.130 0.00 0.00 39.41 1.40
572 573 4.804139 ACACCACGCTATCGAGAAAATAAG 59.196 41.667 0.00 0.00 39.41 1.73
573 574 3.802685 ACCACGCTATCGAGAAAATAAGC 59.197 43.478 0.00 0.00 39.41 3.09
574 575 3.802139 CCACGCTATCGAGAAAATAAGCA 59.198 43.478 0.00 0.00 39.41 3.91
575 576 4.084849 CCACGCTATCGAGAAAATAAGCAG 60.085 45.833 0.00 0.00 39.41 4.24
576 577 4.740205 CACGCTATCGAGAAAATAAGCAGA 59.260 41.667 0.00 0.00 39.41 4.26
577 578 5.232202 CACGCTATCGAGAAAATAAGCAGAA 59.768 40.000 0.00 0.00 39.41 3.02
578 579 5.460419 ACGCTATCGAGAAAATAAGCAGAAG 59.540 40.000 0.00 0.00 39.41 2.85
579 580 5.611412 CGCTATCGAGAAAATAAGCAGAAGC 60.611 44.000 0.00 0.00 38.49 3.86
580 581 5.235186 GCTATCGAGAAAATAAGCAGAAGCA 59.765 40.000 0.00 0.00 45.49 3.91
581 582 5.731599 ATCGAGAAAATAAGCAGAAGCAG 57.268 39.130 0.00 0.00 45.49 4.24
582 583 3.372206 TCGAGAAAATAAGCAGAAGCAGC 59.628 43.478 0.00 0.00 45.49 5.25
583 584 3.678662 GAGAAAATAAGCAGAAGCAGCG 58.321 45.455 0.00 0.00 45.49 5.18
584 585 2.159462 AGAAAATAAGCAGAAGCAGCGC 60.159 45.455 0.00 0.00 45.49 5.92
585 586 1.457346 AAATAAGCAGAAGCAGCGCT 58.543 45.000 2.64 2.64 45.49 5.92
586 587 2.315925 AATAAGCAGAAGCAGCGCTA 57.684 45.000 10.99 0.00 45.49 4.26
587 588 1.576356 ATAAGCAGAAGCAGCGCTAC 58.424 50.000 10.99 3.74 45.49 3.58
588 589 0.532573 TAAGCAGAAGCAGCGCTACT 59.467 50.000 10.99 7.09 45.49 2.57
601 602 4.880537 CTACTGCCGGCGCTGAGG 62.881 72.222 23.90 15.14 37.38 3.86
607 608 4.069232 CCGGCGCTGAGGAGAACA 62.069 66.667 20.25 0.00 0.00 3.18
608 609 2.507992 CGGCGCTGAGGAGAACAG 60.508 66.667 11.90 0.00 38.27 3.16
609 610 2.973899 GGCGCTGAGGAGAACAGA 59.026 61.111 7.64 0.00 37.54 3.41
610 611 1.446966 GGCGCTGAGGAGAACAGAC 60.447 63.158 7.64 0.00 37.54 3.51
611 612 1.803519 GCGCTGAGGAGAACAGACG 60.804 63.158 0.00 0.00 37.54 4.18
612 613 1.876664 CGCTGAGGAGAACAGACGA 59.123 57.895 0.00 0.00 37.21 4.20
613 614 0.241213 CGCTGAGGAGAACAGACGAA 59.759 55.000 0.00 0.00 37.21 3.85
614 615 1.335964 CGCTGAGGAGAACAGACGAAA 60.336 52.381 0.00 0.00 37.21 3.46
615 616 2.755650 GCTGAGGAGAACAGACGAAAA 58.244 47.619 0.00 0.00 37.54 2.29
616 617 2.476997 GCTGAGGAGAACAGACGAAAAC 59.523 50.000 0.00 0.00 37.54 2.43
617 618 3.060602 CTGAGGAGAACAGACGAAAACC 58.939 50.000 0.00 0.00 37.54 3.27
618 619 2.698797 TGAGGAGAACAGACGAAAACCT 59.301 45.455 0.00 0.00 0.00 3.50
619 620 3.893200 TGAGGAGAACAGACGAAAACCTA 59.107 43.478 0.00 0.00 0.00 3.08
620 621 4.236147 GAGGAGAACAGACGAAAACCTAC 58.764 47.826 0.00 0.00 0.00 3.18
621 622 3.006644 AGGAGAACAGACGAAAACCTACC 59.993 47.826 0.00 0.00 0.00 3.18
622 623 3.324117 GAGAACAGACGAAAACCTACCC 58.676 50.000 0.00 0.00 0.00 3.69
623 624 2.970640 AGAACAGACGAAAACCTACCCT 59.029 45.455 0.00 0.00 0.00 4.34
624 625 2.833631 ACAGACGAAAACCTACCCTG 57.166 50.000 0.00 0.00 0.00 4.45
625 626 1.270678 ACAGACGAAAACCTACCCTGC 60.271 52.381 0.00 0.00 0.00 4.85
626 627 0.323957 AGACGAAAACCTACCCTGCC 59.676 55.000 0.00 0.00 0.00 4.85
627 628 1.004200 ACGAAAACCTACCCTGCCG 60.004 57.895 0.00 0.00 0.00 5.69
628 629 1.743995 CGAAAACCTACCCTGCCGG 60.744 63.158 0.00 0.00 37.81 6.13
629 630 2.035155 AAAACCTACCCTGCCGGC 59.965 61.111 22.73 22.73 33.26 6.13
630 631 2.479820 GAAAACCTACCCTGCCGGCT 62.480 60.000 29.70 9.99 33.26 5.52
631 632 2.764637 AAAACCTACCCTGCCGGCTG 62.765 60.000 29.70 27.29 33.26 4.85
692 693 2.818274 GGCGTTCGCCCTTACCAG 60.818 66.667 23.38 0.00 44.99 4.00
693 694 3.497031 GCGTTCGCCCTTACCAGC 61.497 66.667 5.87 0.00 0.00 4.85
694 695 2.818274 CGTTCGCCCTTACCAGCC 60.818 66.667 0.00 0.00 0.00 4.85
695 696 2.818274 GTTCGCCCTTACCAGCCG 60.818 66.667 0.00 0.00 0.00 5.52
696 697 4.090588 TTCGCCCTTACCAGCCGG 62.091 66.667 0.00 0.00 38.77 6.13
700 701 4.489771 CCCTTACCAGCCGGCCAG 62.490 72.222 26.15 18.08 34.57 4.85
738 739 1.000521 CATTGCTTCCCCTGCAGGA 60.001 57.895 34.91 13.12 41.71 3.86
761 793 3.419759 CCCCTTCGTTGCCGTTCG 61.420 66.667 0.00 0.00 35.01 3.95
768 800 1.080974 CGTTGCCGTTCGTCCTAGT 60.081 57.895 0.00 0.00 0.00 2.57
769 801 1.069378 CGTTGCCGTTCGTCCTAGTC 61.069 60.000 0.00 0.00 0.00 2.59
770 802 0.735287 GTTGCCGTTCGTCCTAGTCC 60.735 60.000 0.00 0.00 0.00 3.85
771 803 0.896940 TTGCCGTTCGTCCTAGTCCT 60.897 55.000 0.00 0.00 0.00 3.85
772 804 0.035152 TGCCGTTCGTCCTAGTCCTA 60.035 55.000 0.00 0.00 0.00 2.94
774 806 1.745141 GCCGTTCGTCCTAGTCCTAGA 60.745 57.143 2.86 0.00 35.21 2.43
775 807 2.636830 CCGTTCGTCCTAGTCCTAGAA 58.363 52.381 2.86 0.00 35.21 2.10
776 808 2.354199 CCGTTCGTCCTAGTCCTAGAAC 59.646 54.545 2.86 0.00 35.21 3.01
777 809 3.005554 CGTTCGTCCTAGTCCTAGAACA 58.994 50.000 2.86 0.00 38.18 3.18
778 810 3.063725 CGTTCGTCCTAGTCCTAGAACAG 59.936 52.174 2.86 0.00 38.18 3.16
779 811 4.260170 GTTCGTCCTAGTCCTAGAACAGA 58.740 47.826 2.86 0.00 38.18 3.41
780 812 4.564782 TCGTCCTAGTCCTAGAACAGAA 57.435 45.455 2.86 0.00 35.21 3.02
781 813 5.113446 TCGTCCTAGTCCTAGAACAGAAT 57.887 43.478 2.86 0.00 35.21 2.40
782 814 5.124645 TCGTCCTAGTCCTAGAACAGAATC 58.875 45.833 2.86 0.00 35.21 2.52
783 815 4.882427 CGTCCTAGTCCTAGAACAGAATCA 59.118 45.833 2.86 0.00 35.21 2.57
784 816 5.008217 CGTCCTAGTCCTAGAACAGAATCAG 59.992 48.000 2.86 0.00 35.21 2.90
785 817 5.300792 GTCCTAGTCCTAGAACAGAATCAGG 59.699 48.000 2.86 0.00 35.21 3.86
786 818 5.193930 TCCTAGTCCTAGAACAGAATCAGGA 59.806 44.000 2.86 0.00 35.21 3.86
787 819 5.534654 CCTAGTCCTAGAACAGAATCAGGAG 59.465 48.000 2.86 0.00 36.10 3.69
788 820 3.704061 AGTCCTAGAACAGAATCAGGAGC 59.296 47.826 0.00 0.00 36.10 4.70
789 821 3.449018 GTCCTAGAACAGAATCAGGAGCA 59.551 47.826 0.00 0.00 36.10 4.26
791 823 4.081420 TCCTAGAACAGAATCAGGAGCAAC 60.081 45.833 0.00 0.00 31.76 4.17
792 824 3.064900 AGAACAGAATCAGGAGCAACC 57.935 47.619 0.00 0.00 39.35 3.77
793 825 2.087646 GAACAGAATCAGGAGCAACCC 58.912 52.381 0.00 0.00 40.05 4.11
795 827 0.745845 CAGAATCAGGAGCAACCCGG 60.746 60.000 0.00 0.00 40.05 5.73
796 828 2.044946 AATCAGGAGCAACCCGGC 60.045 61.111 0.00 0.00 40.05 6.13
797 829 3.976701 AATCAGGAGCAACCCGGCG 62.977 63.158 0.00 0.00 40.05 6.46
830 901 5.703592 ACTTCGGCAATTGTGTGATACTTTA 59.296 36.000 7.40 0.00 0.00 1.85
833 904 6.550843 TCGGCAATTGTGTGATACTTTAATG 58.449 36.000 7.40 0.00 0.00 1.90
840 911 7.701539 TTGTGTGATACTTTAATGCCTTGAT 57.298 32.000 0.00 0.00 0.00 2.57
857 928 5.061311 GCCTTGATTGAATCATTGAAACGTG 59.939 40.000 8.90 0.00 39.39 4.49
861 932 7.381766 TGATTGAATCATTGAAACGTGATCT 57.618 32.000 3.29 0.00 34.14 2.75
862 933 8.491331 TGATTGAATCATTGAAACGTGATCTA 57.509 30.769 3.29 0.00 34.14 1.98
877 948 6.736123 ACGTGATCTATAGTTCTTAATGCGT 58.264 36.000 11.25 9.04 0.00 5.24
890 961 4.635765 TCTTAATGCGTTCCTCTTTCCATG 59.364 41.667 0.00 0.00 0.00 3.66
894 965 1.401539 GCGTTCCTCTTTCCATGTTGC 60.402 52.381 0.00 0.00 0.00 4.17
899 970 1.815003 CCTCTTTCCATGTTGCCAGTC 59.185 52.381 0.00 0.00 0.00 3.51
917 988 4.999950 CCAGTCTTGTAATTCTGCACTTCT 59.000 41.667 0.00 0.00 0.00 2.85
922 993 7.171678 AGTCTTGTAATTCTGCACTTCTGTAAC 59.828 37.037 0.00 0.00 0.00 2.50
930 1001 5.182487 TCTGCACTTCTGTAACTGTTGAAA 58.818 37.500 2.69 0.00 0.00 2.69
936 1007 4.764050 TCTGTAACTGTTGAAACCAGGA 57.236 40.909 2.69 0.00 0.00 3.86
947 1018 2.627699 TGAAACCAGGAAACATGGAAGC 59.372 45.455 9.38 0.00 40.51 3.86
973 1044 4.794655 GCACCGGCAAACTTCAAAATCTTA 60.795 41.667 0.00 0.00 40.72 2.10
1012 1083 1.819208 CGAAAGATGGGCGATGGCA 60.819 57.895 1.01 0.00 42.47 4.92
1077 1148 0.795085 ACCTAGACGACGACAACGAG 59.205 55.000 0.00 0.00 42.66 4.18
1114 1185 4.262335 CCGAAGTAACCTTAGGTGTCTTGT 60.262 45.833 20.11 1.84 38.32 3.16
1132 1203 3.039252 TGTGGAAACCAAAGGAACCAT 57.961 42.857 0.00 0.00 34.18 3.55
1133 1204 2.697751 TGTGGAAACCAAAGGAACCATG 59.302 45.455 0.00 0.00 34.18 3.66
1134 1205 2.037121 GTGGAAACCAAAGGAACCATGG 59.963 50.000 11.19 11.19 40.16 3.66
1152 1223 4.880696 CCATGGGACTTTCATTCTCTTCTC 59.119 45.833 2.85 0.00 0.00 2.87
1238 1309 2.895372 CCTTACGCCGTGATGCCC 60.895 66.667 0.00 0.00 0.00 5.36
1239 1310 3.261951 CTTACGCCGTGATGCCCG 61.262 66.667 0.00 0.00 0.00 6.13
1245 1316 2.406616 GCCGTGATGCCCGTTGAAT 61.407 57.895 0.00 0.00 0.00 2.57
1257 1328 4.142773 TGCCCGTTGAATCGTTCTTTAATC 60.143 41.667 0.00 0.00 0.00 1.75
1258 1329 4.142773 GCCCGTTGAATCGTTCTTTAATCA 60.143 41.667 0.00 0.00 0.00 2.57
1279 1354 6.673154 TCATGAGAAACATATTGCACTCTG 57.327 37.500 0.00 0.00 37.46 3.35
1350 1425 1.072331 GTGACTTCTGTGGTGACCCAT 59.928 52.381 0.00 0.00 44.35 4.00
1386 1461 4.488879 GCAGGTTTGCTTCATTCCTAAAG 58.511 43.478 0.00 0.00 46.95 1.85
1415 1490 2.947448 ACCCGGTCGTTTATGTCTAC 57.053 50.000 0.00 0.00 0.00 2.59
1416 1491 2.450476 ACCCGGTCGTTTATGTCTACT 58.550 47.619 0.00 0.00 0.00 2.57
1417 1492 3.620488 ACCCGGTCGTTTATGTCTACTA 58.380 45.455 0.00 0.00 0.00 1.82
1444 1523 3.265791 GCCAACAAAATTTGGTCACACA 58.734 40.909 10.71 0.00 46.89 3.72
1479 1561 1.279496 CAGATGGGTGGAAGGAGACA 58.721 55.000 0.00 0.00 0.00 3.41
1545 1627 1.616865 TGCTTACAACTAGACCAGCGT 59.383 47.619 0.00 0.00 0.00 5.07
1562 1644 1.761174 GTGAGCAGGGGAAGGACAA 59.239 57.895 0.00 0.00 0.00 3.18
1698 1784 1.073897 GGTCTTCAGGTGCCAGCTT 59.926 57.895 0.00 0.00 0.00 3.74
1744 1830 1.153349 GAAGAGCCTAAGGGGTGCG 60.153 63.158 0.00 0.00 44.22 5.34
1796 1887 6.633500 TGCTTGCTTTAGTTCTACATGTTT 57.367 33.333 2.30 0.00 0.00 2.83
1797 1888 7.038154 TGCTTGCTTTAGTTCTACATGTTTT 57.962 32.000 2.30 0.00 0.00 2.43
1798 1889 7.488322 TGCTTGCTTTAGTTCTACATGTTTTT 58.512 30.769 2.30 0.00 0.00 1.94
1992 2084 0.310543 TGCACCGATTTGCTTGTGTC 59.689 50.000 5.42 0.00 43.41 3.67
2005 2097 3.446873 TGCTTGTGTCTTTGAATTGGTGT 59.553 39.130 0.00 0.00 0.00 4.16
2007 2099 4.976116 GCTTGTGTCTTTGAATTGGTGTAC 59.024 41.667 0.00 0.00 0.00 2.90
2028 2120 5.160607 ACTGTATGTTAAGCAAGGCACTA 57.839 39.130 0.00 0.00 38.49 2.74
2066 2158 8.256611 TGTCTTTCAAATATCTCTGTTAGCAC 57.743 34.615 0.00 0.00 0.00 4.40
2071 2163 5.105513 TCAAATATCTCTGTTAGCACACCGA 60.106 40.000 0.00 0.00 0.00 4.69
2072 2164 5.537300 AATATCTCTGTTAGCACACCGAT 57.463 39.130 0.00 0.00 0.00 4.18
2235 2327 9.147732 TCTCCTGCTTGAATACTGAAATATCTA 57.852 33.333 0.00 0.00 0.00 1.98
2248 2340 8.066612 ACTGAAATATCTATGTTTTGTTGGGG 57.933 34.615 0.00 0.00 0.00 4.96
2250 2342 8.657387 TGAAATATCTATGTTTTGTTGGGGAA 57.343 30.769 0.00 0.00 0.00 3.97
2258 2353 2.623416 GTTTTGTTGGGGAACTCTCTGG 59.377 50.000 0.00 0.00 0.00 3.86
2268 2363 5.015178 TGGGGAACTCTCTGGAATGTTATTT 59.985 40.000 0.00 0.00 0.00 1.40
2348 2443 4.197750 CAGATGCTTCTATTCTGCCAGTT 58.802 43.478 1.16 0.00 31.35 3.16
2362 2457 0.040067 CCAGTTGCAGCGAAAGGTTC 60.040 55.000 0.00 0.00 41.81 3.62
2365 2460 2.024414 AGTTGCAGCGAAAGGTTCTTT 58.976 42.857 0.00 0.00 41.81 2.52
2549 2644 5.723887 ACTGATGATGGTAGAAGGAGAAGTT 59.276 40.000 0.00 0.00 0.00 2.66
2561 2656 4.840716 AGGAGAAGTTGAATCAGATGCT 57.159 40.909 0.00 0.00 0.00 3.79
2630 2725 4.184629 GGCCTATGCTTCCATATTCGTAG 58.815 47.826 0.00 0.00 37.74 3.51
2632 2727 5.105473 GGCCTATGCTTCCATATTCGTAGTA 60.105 44.000 0.00 0.00 37.74 1.82
2633 2728 6.037098 GCCTATGCTTCCATATTCGTAGTAG 58.963 44.000 0.00 0.00 33.66 2.57
2729 2824 1.787155 CAGAGACCGTGTTTCAAGACG 59.213 52.381 2.37 2.37 44.22 4.18
2866 2979 3.642848 AGGTCTTTGTTTTGTGCCATGAT 59.357 39.130 0.00 0.00 0.00 2.45
2917 3030 8.311109 TCAACTACACTGAAGCAAACTATATGA 58.689 33.333 0.00 0.00 0.00 2.15
2918 3031 8.935844 CAACTACACTGAAGCAAACTATATGAA 58.064 33.333 0.00 0.00 0.00 2.57
2921 3034 7.744087 ACACTGAAGCAAACTATATGAACAA 57.256 32.000 0.00 0.00 0.00 2.83
2952 3067 6.015918 TGGTCATCATTTGGGTTTAGTGAAT 58.984 36.000 0.00 0.00 0.00 2.57
2990 3266 9.192642 TGTTTATACTAAGCACATGACTAGGTA 57.807 33.333 0.00 4.24 0.00 3.08
3006 3282 6.040955 TGACTAGGTATTGGTCTGATGATGTC 59.959 42.308 0.00 0.00 0.00 3.06
3059 3340 3.131396 GACCATGAGTTCTGACACGTTT 58.869 45.455 0.00 0.00 0.00 3.60
3060 3341 2.872245 ACCATGAGTTCTGACACGTTTG 59.128 45.455 0.00 0.00 0.00 2.93
3061 3342 3.130633 CCATGAGTTCTGACACGTTTGA 58.869 45.455 0.00 0.00 0.00 2.69
3062 3343 3.748048 CCATGAGTTCTGACACGTTTGAT 59.252 43.478 0.00 0.00 0.00 2.57
3063 3344 4.377738 CCATGAGTTCTGACACGTTTGATG 60.378 45.833 0.00 0.00 0.00 3.07
3067 3348 0.396435 TCTGACACGTTTGATGGGCT 59.604 50.000 0.00 0.00 0.00 5.19
3098 3379 0.742505 CGTTGCGTCCTATCCCACTA 59.257 55.000 0.00 0.00 0.00 2.74
3101 3382 3.192844 CGTTGCGTCCTATCCCACTATAT 59.807 47.826 0.00 0.00 0.00 0.86
3103 3384 5.648572 GTTGCGTCCTATCCCACTATATAC 58.351 45.833 0.00 0.00 0.00 1.47
3109 3390 7.284944 GCGTCCTATCCCACTATATACTGTAAT 59.715 40.741 0.00 0.00 0.00 1.89
3241 3522 8.821686 ATGACAATTGGTTCATCCATTTAGTA 57.178 30.769 10.83 0.00 46.60 1.82
3267 3550 5.863397 TGCAAGAAGATTTTTAGCCAATTCG 59.137 36.000 0.00 0.00 0.00 3.34
3277 3560 9.636965 GATTTTTAGCCAATTCGATAAAAATGC 57.363 29.630 25.94 17.24 43.01 3.56
3340 3623 7.380536 AGTGTTGAATGTGTGCAATAAATGAT 58.619 30.769 0.00 0.00 0.00 2.45
3385 3670 4.600692 AAATCCTTCCCAAGAAAAACCG 57.399 40.909 0.00 0.00 0.00 4.44
3458 3743 0.578211 GCTTTGCAACATGTGTGCAC 59.422 50.000 25.33 10.75 38.37 4.57
3473 3758 5.347342 TGTGTGCACCAGAAACAAAATAAG 58.653 37.500 15.69 0.00 0.00 1.73
3553 3843 3.372566 CCCACCTCCCATGCATAGTTTTA 60.373 47.826 0.00 0.00 0.00 1.52
3583 3873 1.086634 GGCTTGTGTCTCCTCGATGC 61.087 60.000 0.00 0.00 0.00 3.91
3589 3879 0.687427 TGTCTCCTCGATGCCCATGA 60.687 55.000 0.00 0.00 0.00 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.517242 GCCATGTACATAGCTGGAGC 58.483 55.000 17.64 5.15 42.49 4.70
1 2 1.606480 CCGCCATGTACATAGCTGGAG 60.606 57.143 22.54 16.65 0.00 3.86
2 3 0.392706 CCGCCATGTACATAGCTGGA 59.607 55.000 22.54 0.00 0.00 3.86
3 4 1.230635 GCCGCCATGTACATAGCTGG 61.231 60.000 21.37 22.08 0.00 4.85
4 5 1.560004 CGCCGCCATGTACATAGCTG 61.560 60.000 21.37 16.79 0.00 4.24
5 6 1.300931 CGCCGCCATGTACATAGCT 60.301 57.895 21.37 0.00 0.00 3.32
6 7 2.954753 GCGCCGCCATGTACATAGC 61.955 63.158 15.34 15.34 0.00 2.97
7 8 3.244105 GCGCCGCCATGTACATAG 58.756 61.111 8.32 1.85 0.00 2.23
19 20 3.853330 CACGAGTTGATGGCGCCG 61.853 66.667 23.90 9.58 0.00 6.46
20 21 2.845752 TACCACGAGTTGATGGCGCC 62.846 60.000 22.73 22.73 39.84 6.53
21 22 1.447140 TACCACGAGTTGATGGCGC 60.447 57.895 0.00 0.00 39.84 6.53
22 23 0.108804 AGTACCACGAGTTGATGGCG 60.109 55.000 0.00 0.00 39.84 5.69
23 24 1.204941 AGAGTACCACGAGTTGATGGC 59.795 52.381 0.00 0.00 39.84 4.40
24 25 3.254060 CAAGAGTACCACGAGTTGATGG 58.746 50.000 0.00 0.00 42.13 3.51
25 26 3.914312 ACAAGAGTACCACGAGTTGATG 58.086 45.455 0.00 0.00 0.00 3.07
26 27 3.366070 CGACAAGAGTACCACGAGTTGAT 60.366 47.826 0.00 0.00 0.00 2.57
27 28 2.031420 CGACAAGAGTACCACGAGTTGA 60.031 50.000 0.00 0.00 0.00 3.18
28 29 2.316792 CGACAAGAGTACCACGAGTTG 58.683 52.381 0.00 0.00 0.00 3.16
29 30 1.335689 GCGACAAGAGTACCACGAGTT 60.336 52.381 0.00 0.00 0.00 3.01
30 31 0.240411 GCGACAAGAGTACCACGAGT 59.760 55.000 0.00 0.00 0.00 4.18
31 32 0.522180 AGCGACAAGAGTACCACGAG 59.478 55.000 0.00 0.00 0.00 4.18
32 33 1.812235 TAGCGACAAGAGTACCACGA 58.188 50.000 0.00 0.00 0.00 4.35
33 34 2.624316 TTAGCGACAAGAGTACCACG 57.376 50.000 0.00 0.00 0.00 4.94
34 35 3.645884 TGTTTAGCGACAAGAGTACCAC 58.354 45.455 0.00 0.00 0.00 4.16
35 36 4.325028 TTGTTTAGCGACAAGAGTACCA 57.675 40.909 0.00 0.00 34.77 3.25
36 37 6.327934 TCTATTGTTTAGCGACAAGAGTACC 58.672 40.000 18.13 0.00 44.82 3.34
37 38 7.988904 ATCTATTGTTTAGCGACAAGAGTAC 57.011 36.000 18.13 0.00 44.82 2.73
73 74 0.598680 GGAGATGCCCTCGACATTCG 60.599 60.000 0.00 0.00 42.89 3.34
74 75 3.297391 GGAGATGCCCTCGACATTC 57.703 57.895 0.00 0.00 42.89 2.67
84 85 3.374764 AGGGTTAAAATTGGGAGATGCC 58.625 45.455 0.00 0.00 0.00 4.40
85 86 4.023291 TGAGGGTTAAAATTGGGAGATGC 58.977 43.478 0.00 0.00 0.00 3.91
86 87 6.460123 CGATTGAGGGTTAAAATTGGGAGATG 60.460 42.308 0.00 0.00 0.00 2.90
87 88 5.594317 CGATTGAGGGTTAAAATTGGGAGAT 59.406 40.000 0.00 0.00 0.00 2.75
88 89 4.947388 CGATTGAGGGTTAAAATTGGGAGA 59.053 41.667 0.00 0.00 0.00 3.71
89 90 4.705023 ACGATTGAGGGTTAAAATTGGGAG 59.295 41.667 0.00 0.00 0.00 4.30
90 91 4.668636 ACGATTGAGGGTTAAAATTGGGA 58.331 39.130 0.00 0.00 0.00 4.37
91 92 5.400066 AACGATTGAGGGTTAAAATTGGG 57.600 39.130 0.00 0.00 0.00 4.12
92 93 5.092781 CGAACGATTGAGGGTTAAAATTGG 58.907 41.667 0.00 0.00 0.00 3.16
93 94 5.092781 CCGAACGATTGAGGGTTAAAATTG 58.907 41.667 0.00 0.00 0.00 2.32
94 95 5.005094 TCCGAACGATTGAGGGTTAAAATT 58.995 37.500 0.00 0.00 0.00 1.82
95 96 4.393990 GTCCGAACGATTGAGGGTTAAAAT 59.606 41.667 0.00 0.00 0.00 1.82
96 97 3.747529 GTCCGAACGATTGAGGGTTAAAA 59.252 43.478 0.00 0.00 0.00 1.52
97 98 3.328505 GTCCGAACGATTGAGGGTTAAA 58.671 45.455 0.00 0.00 0.00 1.52
98 99 2.354003 GGTCCGAACGATTGAGGGTTAA 60.354 50.000 0.00 0.00 0.00 2.01
99 100 1.205417 GGTCCGAACGATTGAGGGTTA 59.795 52.381 0.00 0.00 0.00 2.85
100 101 0.036671 GGTCCGAACGATTGAGGGTT 60.037 55.000 0.00 0.00 0.00 4.11
101 102 1.595357 GGTCCGAACGATTGAGGGT 59.405 57.895 0.00 0.00 0.00 4.34
102 103 1.518572 CGGTCCGAACGATTGAGGG 60.519 63.158 4.91 0.00 0.00 4.30
103 104 0.525668 CTCGGTCCGAACGATTGAGG 60.526 60.000 16.23 0.00 39.89 3.86
104 105 1.140407 GCTCGGTCCGAACGATTGAG 61.140 60.000 16.23 1.85 39.89 3.02
105 106 1.153901 GCTCGGTCCGAACGATTGA 60.154 57.895 16.23 0.00 39.89 2.57
106 107 2.505498 CGCTCGGTCCGAACGATTG 61.505 63.158 28.53 11.10 46.15 2.67
107 108 2.202570 CGCTCGGTCCGAACGATT 60.203 61.111 28.53 0.00 46.15 3.34
108 109 3.129502 TCGCTCGGTCCGAACGAT 61.130 61.111 30.32 0.00 46.60 3.73
110 111 2.202570 AATCGCTCGGTCCGAACG 60.203 61.111 27.01 27.01 44.92 3.95
111 112 2.222217 CGAATCGCTCGGTCCGAAC 61.222 63.158 16.23 10.25 44.20 3.95
112 113 2.101575 CGAATCGCTCGGTCCGAA 59.898 61.111 16.23 0.22 44.20 4.30
120 121 2.222624 CAAAACGTGTTCGAATCGCTC 58.777 47.619 19.95 1.38 40.62 5.03
121 122 1.659211 GCAAAACGTGTTCGAATCGCT 60.659 47.619 19.95 9.71 40.62 4.93
122 123 0.695410 GCAAAACGTGTTCGAATCGC 59.305 50.000 19.95 11.61 40.62 4.58
123 124 1.314581 GGCAAAACGTGTTCGAATCG 58.685 50.000 18.93 18.93 40.62 3.34
124 125 2.392933 TGGCAAAACGTGTTCGAATC 57.607 45.000 0.00 0.00 40.62 2.52
125 126 2.351350 GGATGGCAAAACGTGTTCGAAT 60.351 45.455 0.00 0.00 40.62 3.34
126 127 1.002251 GGATGGCAAAACGTGTTCGAA 60.002 47.619 0.00 0.00 40.62 3.71
127 128 0.589223 GGATGGCAAAACGTGTTCGA 59.411 50.000 0.00 0.00 40.62 3.71
128 129 0.309302 TGGATGGCAAAACGTGTTCG 59.691 50.000 0.00 0.00 43.34 3.95
129 130 2.124122 GTTGGATGGCAAAACGTGTTC 58.876 47.619 0.00 0.00 0.00 3.18
130 131 1.478510 TGTTGGATGGCAAAACGTGTT 59.521 42.857 0.00 0.00 0.00 3.32
131 132 1.066908 CTGTTGGATGGCAAAACGTGT 59.933 47.619 0.00 0.00 0.00 4.49
132 133 1.066908 ACTGTTGGATGGCAAAACGTG 59.933 47.619 0.00 0.00 0.00 4.49
133 134 1.398692 ACTGTTGGATGGCAAAACGT 58.601 45.000 0.00 0.00 0.00 3.99
134 135 2.351350 GGTACTGTTGGATGGCAAAACG 60.351 50.000 0.00 0.00 0.00 3.60
135 136 2.029380 GGGTACTGTTGGATGGCAAAAC 60.029 50.000 0.00 0.00 0.00 2.43
136 137 2.243810 GGGTACTGTTGGATGGCAAAA 58.756 47.619 0.00 0.00 0.00 2.44
137 138 1.549037 GGGGTACTGTTGGATGGCAAA 60.549 52.381 0.00 0.00 0.00 3.68
138 139 0.039035 GGGGTACTGTTGGATGGCAA 59.961 55.000 0.00 0.00 0.00 4.52
139 140 1.136961 TGGGGTACTGTTGGATGGCA 61.137 55.000 0.00 0.00 0.00 4.92
140 141 0.258774 ATGGGGTACTGTTGGATGGC 59.741 55.000 0.00 0.00 0.00 4.40
141 142 1.410083 CCATGGGGTACTGTTGGATGG 60.410 57.143 2.85 0.00 0.00 3.51
142 143 1.563879 TCCATGGGGTACTGTTGGATG 59.436 52.381 13.02 0.00 31.67 3.51
143 144 1.979809 TCCATGGGGTACTGTTGGAT 58.020 50.000 13.02 0.00 31.67 3.41
144 145 1.843851 GATCCATGGGGTACTGTTGGA 59.156 52.381 13.02 8.93 40.54 3.53
145 146 1.133792 GGATCCATGGGGTACTGTTGG 60.134 57.143 13.02 0.00 34.93 3.77
146 147 1.475034 CGGATCCATGGGGTACTGTTG 60.475 57.143 13.02 0.00 34.93 3.33
147 148 0.837272 CGGATCCATGGGGTACTGTT 59.163 55.000 13.02 0.00 34.93 3.16
148 149 1.696097 GCGGATCCATGGGGTACTGT 61.696 60.000 13.02 0.00 34.93 3.55
149 150 1.071471 GCGGATCCATGGGGTACTG 59.929 63.158 13.02 7.30 34.93 2.74
150 151 2.507854 CGCGGATCCATGGGGTACT 61.508 63.158 13.02 0.00 34.93 2.73
151 152 2.030562 CGCGGATCCATGGGGTAC 59.969 66.667 13.02 0.62 34.93 3.34
152 153 3.238497 CCGCGGATCCATGGGGTA 61.238 66.667 24.07 0.00 33.79 3.69
154 155 4.626081 GTCCGCGGATCCATGGGG 62.626 72.222 33.58 14.00 39.40 4.96
155 156 3.814615 CTGTCCGCGGATCCATGGG 62.815 68.421 33.58 10.02 0.00 4.00
156 157 2.280389 CTGTCCGCGGATCCATGG 60.280 66.667 33.58 10.77 0.00 3.66
157 158 2.280389 CCTGTCCGCGGATCCATG 60.280 66.667 33.58 18.20 0.00 3.66
158 159 4.241555 GCCTGTCCGCGGATCCAT 62.242 66.667 33.58 0.00 0.00 3.41
169 170 4.864334 CAGATGCCCGGGCCTGTC 62.864 72.222 41.75 32.98 41.09 3.51
171 172 3.944250 AAACAGATGCCCGGGCCTG 62.944 63.158 41.75 38.56 41.09 4.85
172 173 3.224007 AAAACAGATGCCCGGGCCT 62.224 57.895 41.75 33.75 41.09 5.19
173 174 2.679996 AAAACAGATGCCCGGGCC 60.680 61.111 41.75 27.67 41.09 5.80
174 175 1.250840 AAGAAAACAGATGCCCGGGC 61.251 55.000 39.40 39.40 42.35 6.13
175 176 0.527565 CAAGAAAACAGATGCCCGGG 59.472 55.000 19.09 19.09 0.00 5.73
176 177 1.247567 ACAAGAAAACAGATGCCCGG 58.752 50.000 0.00 0.00 0.00 5.73
177 178 4.497473 TTTACAAGAAAACAGATGCCCG 57.503 40.909 0.00 0.00 0.00 6.13
178 179 5.095490 CGATTTACAAGAAAACAGATGCCC 58.905 41.667 0.00 0.00 0.00 5.36
179 180 5.095490 CCGATTTACAAGAAAACAGATGCC 58.905 41.667 0.00 0.00 0.00 4.40
180 181 5.938322 TCCGATTTACAAGAAAACAGATGC 58.062 37.500 0.00 0.00 0.00 3.91
181 182 6.524586 GCTTCCGATTTACAAGAAAACAGATG 59.475 38.462 0.00 0.00 0.00 2.90
182 183 6.206634 TGCTTCCGATTTACAAGAAAACAGAT 59.793 34.615 0.00 0.00 0.00 2.90
183 184 5.529430 TGCTTCCGATTTACAAGAAAACAGA 59.471 36.000 0.00 0.00 0.00 3.41
184 185 5.757886 TGCTTCCGATTTACAAGAAAACAG 58.242 37.500 0.00 0.00 0.00 3.16
185 186 5.759506 TGCTTCCGATTTACAAGAAAACA 57.240 34.783 0.00 0.00 0.00 2.83
186 187 6.695713 AGTTTGCTTCCGATTTACAAGAAAAC 59.304 34.615 6.43 6.43 42.53 2.43
187 188 6.801575 AGTTTGCTTCCGATTTACAAGAAAA 58.198 32.000 0.00 0.00 0.00 2.29
188 189 6.385649 AGTTTGCTTCCGATTTACAAGAAA 57.614 33.333 0.00 0.00 0.00 2.52
189 190 6.148811 CCTAGTTTGCTTCCGATTTACAAGAA 59.851 38.462 0.00 0.00 0.00 2.52
190 191 5.642063 CCTAGTTTGCTTCCGATTTACAAGA 59.358 40.000 0.00 0.00 0.00 3.02
191 192 5.163754 CCCTAGTTTGCTTCCGATTTACAAG 60.164 44.000 0.00 0.00 0.00 3.16
192 193 4.698304 CCCTAGTTTGCTTCCGATTTACAA 59.302 41.667 0.00 0.00 0.00 2.41
193 194 4.258543 CCCTAGTTTGCTTCCGATTTACA 58.741 43.478 0.00 0.00 0.00 2.41
194 195 3.626217 CCCCTAGTTTGCTTCCGATTTAC 59.374 47.826 0.00 0.00 0.00 2.01
195 196 3.371166 CCCCCTAGTTTGCTTCCGATTTA 60.371 47.826 0.00 0.00 0.00 1.40
196 197 2.620627 CCCCCTAGTTTGCTTCCGATTT 60.621 50.000 0.00 0.00 0.00 2.17
197 198 1.064685 CCCCCTAGTTTGCTTCCGATT 60.065 52.381 0.00 0.00 0.00 3.34
198 199 0.546598 CCCCCTAGTTTGCTTCCGAT 59.453 55.000 0.00 0.00 0.00 4.18
199 200 1.988015 CCCCCTAGTTTGCTTCCGA 59.012 57.895 0.00 0.00 0.00 4.55
200 201 4.637771 CCCCCTAGTTTGCTTCCG 57.362 61.111 0.00 0.00 0.00 4.30
214 215 0.039618 TTGACTCCTGCAAATCCCCC 59.960 55.000 0.00 0.00 0.00 5.40
215 216 1.004745 TCTTGACTCCTGCAAATCCCC 59.995 52.381 0.00 0.00 0.00 4.81
216 217 2.087646 GTCTTGACTCCTGCAAATCCC 58.912 52.381 0.00 0.00 0.00 3.85
217 218 2.087646 GGTCTTGACTCCTGCAAATCC 58.912 52.381 0.61 0.00 0.00 3.01
218 219 1.734465 CGGTCTTGACTCCTGCAAATC 59.266 52.381 0.61 0.00 0.00 2.17
219 220 1.813513 CGGTCTTGACTCCTGCAAAT 58.186 50.000 0.61 0.00 0.00 2.32
220 221 0.884704 GCGGTCTTGACTCCTGCAAA 60.885 55.000 0.61 0.00 0.00 3.68
221 222 1.301716 GCGGTCTTGACTCCTGCAA 60.302 57.895 0.61 0.00 0.00 4.08
222 223 2.343758 GCGGTCTTGACTCCTGCA 59.656 61.111 0.61 0.00 0.00 4.41
223 224 2.435059 GGCGGTCTTGACTCCTGC 60.435 66.667 0.61 1.15 0.00 4.85
224 225 1.374758 GTGGCGGTCTTGACTCCTG 60.375 63.158 0.61 0.00 0.00 3.86
225 226 2.584391 GGTGGCGGTCTTGACTCCT 61.584 63.158 0.61 0.00 0.00 3.69
226 227 2.047179 GGTGGCGGTCTTGACTCC 60.047 66.667 0.61 3.77 0.00 3.85
227 228 1.668151 GTGGTGGCGGTCTTGACTC 60.668 63.158 0.61 0.00 0.00 3.36
228 229 2.426023 GTGGTGGCGGTCTTGACT 59.574 61.111 0.61 0.00 0.00 3.41
229 230 2.424705 TACGTGGTGGCGGTCTTGAC 62.425 60.000 0.00 0.00 35.98 3.18
230 231 2.149803 CTACGTGGTGGCGGTCTTGA 62.150 60.000 0.00 0.00 35.98 3.02
231 232 1.736645 CTACGTGGTGGCGGTCTTG 60.737 63.158 0.00 0.00 35.98 3.02
232 233 2.654877 CTACGTGGTGGCGGTCTT 59.345 61.111 0.00 0.00 35.98 3.01
233 234 3.379445 CCTACGTGGTGGCGGTCT 61.379 66.667 0.00 0.00 35.98 3.85
234 235 3.352338 CTCCTACGTGGTGGCGGTC 62.352 68.421 0.00 0.00 37.07 4.79
235 236 3.379445 CTCCTACGTGGTGGCGGT 61.379 66.667 0.00 0.00 37.07 5.68
236 237 3.352338 GACTCCTACGTGGTGGCGG 62.352 68.421 0.00 0.00 37.07 6.13
237 238 2.181021 GACTCCTACGTGGTGGCG 59.819 66.667 0.00 0.00 37.07 5.69
238 239 1.215647 CAGACTCCTACGTGGTGGC 59.784 63.158 0.00 0.75 37.60 5.01
239 240 0.526662 GTCAGACTCCTACGTGGTGG 59.473 60.000 0.00 0.00 37.07 4.61
240 241 1.068472 GTGTCAGACTCCTACGTGGTG 60.068 57.143 0.00 1.33 37.07 4.17
241 242 1.245732 GTGTCAGACTCCTACGTGGT 58.754 55.000 0.00 0.00 37.07 4.16
242 243 0.526662 GGTGTCAGACTCCTACGTGG 59.473 60.000 13.59 0.00 37.10 4.94
243 244 1.469308 GAGGTGTCAGACTCCTACGTG 59.531 57.143 21.80 0.00 41.72 4.49
244 245 1.823797 GAGGTGTCAGACTCCTACGT 58.176 55.000 21.80 4.11 41.72 3.57
250 251 0.530288 GAGCTGGAGGTGTCAGACTC 59.470 60.000 1.31 0.00 34.36 3.36
251 252 0.178950 TGAGCTGGAGGTGTCAGACT 60.179 55.000 1.31 0.00 34.36 3.24
252 253 0.037790 GTGAGCTGGAGGTGTCAGAC 60.038 60.000 0.00 0.00 34.36 3.51
253 254 1.188219 GGTGAGCTGGAGGTGTCAGA 61.188 60.000 0.00 0.00 34.36 3.27
254 255 1.294780 GGTGAGCTGGAGGTGTCAG 59.705 63.158 0.00 0.00 35.49 3.51
255 256 2.217038 GGGTGAGCTGGAGGTGTCA 61.217 63.158 0.00 0.00 0.00 3.58
256 257 1.768684 TTGGGTGAGCTGGAGGTGTC 61.769 60.000 0.00 0.00 0.00 3.67
257 258 1.352622 TTTGGGTGAGCTGGAGGTGT 61.353 55.000 0.00 0.00 0.00 4.16
258 259 0.178992 TTTTGGGTGAGCTGGAGGTG 60.179 55.000 0.00 0.00 0.00 4.00
259 260 0.555769 TTTTTGGGTGAGCTGGAGGT 59.444 50.000 0.00 0.00 0.00 3.85
260 261 0.961753 GTTTTTGGGTGAGCTGGAGG 59.038 55.000 0.00 0.00 0.00 4.30
261 262 0.961753 GGTTTTTGGGTGAGCTGGAG 59.038 55.000 0.00 0.00 0.00 3.86
262 263 0.469144 GGGTTTTTGGGTGAGCTGGA 60.469 55.000 0.00 0.00 0.00 3.86
263 264 0.469892 AGGGTTTTTGGGTGAGCTGG 60.470 55.000 0.00 0.00 0.00 4.85
264 265 0.961753 GAGGGTTTTTGGGTGAGCTG 59.038 55.000 0.00 0.00 0.00 4.24
265 266 0.178961 GGAGGGTTTTTGGGTGAGCT 60.179 55.000 0.00 0.00 0.00 4.09
266 267 1.185618 GGGAGGGTTTTTGGGTGAGC 61.186 60.000 0.00 0.00 0.00 4.26
267 268 0.482887 AGGGAGGGTTTTTGGGTGAG 59.517 55.000 0.00 0.00 0.00 3.51
268 269 0.187361 CAGGGAGGGTTTTTGGGTGA 59.813 55.000 0.00 0.00 0.00 4.02
269 270 0.187361 TCAGGGAGGGTTTTTGGGTG 59.813 55.000 0.00 0.00 0.00 4.61
270 271 0.187606 GTCAGGGAGGGTTTTTGGGT 59.812 55.000 0.00 0.00 0.00 4.51
271 272 0.541998 GGTCAGGGAGGGTTTTTGGG 60.542 60.000 0.00 0.00 0.00 4.12
272 273 0.482887 AGGTCAGGGAGGGTTTTTGG 59.517 55.000 0.00 0.00 0.00 3.28
273 274 1.963515 CAAGGTCAGGGAGGGTTTTTG 59.036 52.381 0.00 0.00 0.00 2.44
274 275 1.573857 ACAAGGTCAGGGAGGGTTTTT 59.426 47.619 0.00 0.00 0.00 1.94
275 276 1.133482 CACAAGGTCAGGGAGGGTTTT 60.133 52.381 0.00 0.00 0.00 2.43
276 277 0.478507 CACAAGGTCAGGGAGGGTTT 59.521 55.000 0.00 0.00 0.00 3.27
277 278 0.697854 ACACAAGGTCAGGGAGGGTT 60.698 55.000 0.00 0.00 0.00 4.11
278 279 1.073706 ACACAAGGTCAGGGAGGGT 60.074 57.895 0.00 0.00 0.00 4.34
279 280 1.679898 GACACAAGGTCAGGGAGGG 59.320 63.158 0.00 0.00 46.19 4.30
295 296 4.034285 TGAAAAAGGGAAGGATGGAGAC 57.966 45.455 0.00 0.00 0.00 3.36
296 297 4.740154 TTGAAAAAGGGAAGGATGGAGA 57.260 40.909 0.00 0.00 0.00 3.71
297 298 4.382362 GCATTGAAAAAGGGAAGGATGGAG 60.382 45.833 0.00 0.00 0.00 3.86
298 299 3.515104 GCATTGAAAAAGGGAAGGATGGA 59.485 43.478 0.00 0.00 0.00 3.41
299 300 3.261390 TGCATTGAAAAAGGGAAGGATGG 59.739 43.478 0.00 0.00 0.00 3.51
300 301 4.540359 TGCATTGAAAAAGGGAAGGATG 57.460 40.909 0.00 0.00 0.00 3.51
301 302 4.162888 GGATGCATTGAAAAAGGGAAGGAT 59.837 41.667 0.00 0.00 0.00 3.24
302 303 3.515104 GGATGCATTGAAAAAGGGAAGGA 59.485 43.478 0.00 0.00 0.00 3.36
303 304 3.676873 CGGATGCATTGAAAAAGGGAAGG 60.677 47.826 0.00 0.00 0.00 3.46
304 305 3.514645 CGGATGCATTGAAAAAGGGAAG 58.485 45.455 0.00 0.00 0.00 3.46
305 306 2.353605 GCGGATGCATTGAAAAAGGGAA 60.354 45.455 0.00 0.00 42.15 3.97
306 307 1.204467 GCGGATGCATTGAAAAAGGGA 59.796 47.619 0.00 0.00 42.15 4.20
307 308 1.205417 AGCGGATGCATTGAAAAAGGG 59.795 47.619 0.00 0.00 46.23 3.95
308 309 2.660189 AGCGGATGCATTGAAAAAGG 57.340 45.000 0.00 0.00 46.23 3.11
309 310 3.577667 TGAAGCGGATGCATTGAAAAAG 58.422 40.909 0.00 0.00 46.23 2.27
310 311 3.657015 TGAAGCGGATGCATTGAAAAA 57.343 38.095 0.00 0.00 46.23 1.94
311 312 3.429272 GGATGAAGCGGATGCATTGAAAA 60.429 43.478 0.00 0.00 46.23 2.29
312 313 2.099592 GGATGAAGCGGATGCATTGAAA 59.900 45.455 0.00 0.00 46.23 2.69
313 314 1.677576 GGATGAAGCGGATGCATTGAA 59.322 47.619 0.00 0.00 46.23 2.69
314 315 1.311859 GGATGAAGCGGATGCATTGA 58.688 50.000 0.00 0.00 46.23 2.57
315 316 0.313043 GGGATGAAGCGGATGCATTG 59.687 55.000 0.00 0.00 46.23 2.82
316 317 0.184451 AGGGATGAAGCGGATGCATT 59.816 50.000 0.00 0.00 46.23 3.56
317 318 0.250640 GAGGGATGAAGCGGATGCAT 60.251 55.000 0.00 0.00 46.23 3.96
318 319 1.146930 GAGGGATGAAGCGGATGCA 59.853 57.895 0.00 0.00 46.23 3.96
319 320 1.146930 TGAGGGATGAAGCGGATGC 59.853 57.895 0.00 0.00 43.24 3.91
320 321 0.533755 GGTGAGGGATGAAGCGGATG 60.534 60.000 0.00 0.00 0.00 3.51
321 322 0.982852 TGGTGAGGGATGAAGCGGAT 60.983 55.000 0.00 0.00 0.00 4.18
322 323 1.612146 TGGTGAGGGATGAAGCGGA 60.612 57.895 0.00 0.00 0.00 5.54
323 324 1.153289 CTGGTGAGGGATGAAGCGG 60.153 63.158 0.00 0.00 0.00 5.52
324 325 1.817099 GCTGGTGAGGGATGAAGCG 60.817 63.158 0.00 0.00 0.00 4.68
325 326 1.817099 CGCTGGTGAGGGATGAAGC 60.817 63.158 0.00 0.00 33.95 3.86
326 327 0.036010 AACGCTGGTGAGGGATGAAG 60.036 55.000 0.00 0.00 36.04 3.02
327 328 0.321564 CAACGCTGGTGAGGGATGAA 60.322 55.000 0.00 0.00 37.17 2.57
328 329 1.296392 CAACGCTGGTGAGGGATGA 59.704 57.895 0.00 0.00 37.17 2.92
329 330 1.003355 ACAACGCTGGTGAGGGATG 60.003 57.895 0.61 0.00 39.84 3.51
330 331 1.296715 GACAACGCTGGTGAGGGAT 59.703 57.895 0.61 0.00 36.04 3.85
331 332 2.741092 GACAACGCTGGTGAGGGA 59.259 61.111 0.61 0.00 36.04 4.20
332 333 2.507110 ATCGACAACGCTGGTGAGGG 62.507 60.000 0.61 0.00 39.58 4.30
333 334 1.079819 ATCGACAACGCTGGTGAGG 60.080 57.895 0.61 0.00 39.58 3.86
334 335 0.667487 ACATCGACAACGCTGGTGAG 60.667 55.000 0.61 0.00 39.49 3.51
335 336 0.599060 TACATCGACAACGCTGGTGA 59.401 50.000 0.61 0.00 39.49 4.02
336 337 0.713883 GTACATCGACAACGCTGGTG 59.286 55.000 0.00 0.00 39.49 4.17
337 338 0.389426 GGTACATCGACAACGCTGGT 60.389 55.000 0.00 0.00 39.49 4.00
338 339 0.389296 TGGTACATCGACAACGCTGG 60.389 55.000 0.00 0.00 39.49 4.85
339 340 0.713883 GTGGTACATCGACAACGCTG 59.286 55.000 0.00 0.00 44.52 5.18
340 341 0.389426 GGTGGTACATCGACAACGCT 60.389 55.000 0.00 0.00 44.52 5.07
341 342 1.356527 GGGTGGTACATCGACAACGC 61.357 60.000 0.00 0.00 42.93 4.84
342 343 0.245539 AGGGTGGTACATCGACAACG 59.754 55.000 0.00 0.00 42.93 4.10
343 344 1.674817 CCAGGGTGGTACATCGACAAC 60.675 57.143 0.00 0.00 42.93 3.32
344 345 0.611200 CCAGGGTGGTACATCGACAA 59.389 55.000 0.00 0.00 42.93 3.18
345 346 1.895020 GCCAGGGTGGTACATCGACA 61.895 60.000 0.00 0.00 42.93 4.35
346 347 1.153429 GCCAGGGTGGTACATCGAC 60.153 63.158 0.00 0.00 42.93 4.20
347 348 2.363975 GGCCAGGGTGGTACATCGA 61.364 63.158 0.00 0.00 42.93 3.59
348 349 2.189521 GGCCAGGGTGGTACATCG 59.810 66.667 0.00 0.00 42.93 3.84
349 350 2.189521 CGGCCAGGGTGGTACATC 59.810 66.667 2.24 0.00 44.52 3.06
350 351 2.609610 ACGGCCAGGGTGGTACAT 60.610 61.111 2.24 0.00 44.52 2.29
351 352 3.315949 GACGGCCAGGGTGGTACA 61.316 66.667 2.24 0.00 40.46 2.90
352 353 3.001406 AGACGGCCAGGGTGGTAC 61.001 66.667 2.24 0.00 40.46 3.34
353 354 3.000819 CAGACGGCCAGGGTGGTA 61.001 66.667 2.24 0.00 40.46 3.25
364 365 3.672295 GAGAGGGCTTGGCAGACGG 62.672 68.421 0.00 0.00 0.00 4.79
365 366 2.125350 GAGAGGGCTTGGCAGACG 60.125 66.667 0.00 0.00 0.00 4.18
366 367 2.125350 CGAGAGGGCTTGGCAGAC 60.125 66.667 0.00 0.00 0.00 3.51
367 368 1.913262 TTCGAGAGGGCTTGGCAGA 60.913 57.895 0.00 0.00 0.00 4.26
368 369 1.743252 GTTCGAGAGGGCTTGGCAG 60.743 63.158 0.00 0.00 0.00 4.85
369 370 1.768684 AAGTTCGAGAGGGCTTGGCA 61.769 55.000 0.00 0.00 0.00 4.92
370 371 1.003233 AAGTTCGAGAGGGCTTGGC 60.003 57.895 0.00 0.00 0.00 4.52
371 372 0.391793 GGAAGTTCGAGAGGGCTTGG 60.392 60.000 0.00 0.00 0.00 3.61
372 373 0.737715 CGGAAGTTCGAGAGGGCTTG 60.738 60.000 0.00 0.00 0.00 4.01
373 374 1.592223 CGGAAGTTCGAGAGGGCTT 59.408 57.895 0.00 0.00 0.00 4.35
374 375 3.007973 GCGGAAGTTCGAGAGGGCT 62.008 63.158 0.00 0.00 0.00 5.19
375 376 1.664321 TAGCGGAAGTTCGAGAGGGC 61.664 60.000 0.00 0.00 0.00 5.19
376 377 0.100861 GTAGCGGAAGTTCGAGAGGG 59.899 60.000 0.00 0.00 0.00 4.30
377 378 0.100861 GGTAGCGGAAGTTCGAGAGG 59.899 60.000 0.00 0.00 0.00 3.69
378 379 1.064357 GAGGTAGCGGAAGTTCGAGAG 59.936 57.143 0.00 0.00 0.00 3.20
379 380 1.093159 GAGGTAGCGGAAGTTCGAGA 58.907 55.000 0.00 0.00 0.00 4.04
380 381 0.100861 GGAGGTAGCGGAAGTTCGAG 59.899 60.000 0.00 0.00 0.00 4.04
381 382 0.609957 TGGAGGTAGCGGAAGTTCGA 60.610 55.000 0.00 0.00 0.00 3.71
382 383 0.458025 GTGGAGGTAGCGGAAGTTCG 60.458 60.000 0.00 0.00 0.00 3.95
383 384 0.108281 GGTGGAGGTAGCGGAAGTTC 60.108 60.000 0.00 0.00 0.00 3.01
384 385 1.885163 CGGTGGAGGTAGCGGAAGTT 61.885 60.000 0.00 0.00 37.86 2.66
385 386 2.348888 CGGTGGAGGTAGCGGAAGT 61.349 63.158 0.00 0.00 37.86 3.01
386 387 2.494918 CGGTGGAGGTAGCGGAAG 59.505 66.667 0.00 0.00 37.86 3.46
387 388 2.842188 TAGCGGTGGAGGTAGCGGAA 62.842 60.000 0.00 0.00 41.47 4.30
388 389 3.348554 TAGCGGTGGAGGTAGCGGA 62.349 63.158 0.00 0.00 41.47 5.54
389 390 2.831742 TAGCGGTGGAGGTAGCGG 60.832 66.667 0.00 0.00 41.47 5.52
390 391 2.412112 GTAGCGGTGGAGGTAGCG 59.588 66.667 0.00 0.00 43.78 4.26
391 392 1.141234 GTGTAGCGGTGGAGGTAGC 59.859 63.158 0.00 0.00 0.00 3.58
392 393 1.673808 GGGTGTAGCGGTGGAGGTAG 61.674 65.000 0.00 0.00 0.00 3.18
393 394 1.683365 GGGTGTAGCGGTGGAGGTA 60.683 63.158 0.00 0.00 0.00 3.08
394 395 3.001406 GGGTGTAGCGGTGGAGGT 61.001 66.667 0.00 0.00 0.00 3.85
395 396 3.000819 TGGGTGTAGCGGTGGAGG 61.001 66.667 0.00 0.00 0.00 4.30
396 397 2.227089 GACTGGGTGTAGCGGTGGAG 62.227 65.000 0.00 0.00 0.00 3.86
397 398 2.203728 ACTGGGTGTAGCGGTGGA 60.204 61.111 0.00 0.00 0.00 4.02
398 399 2.107041 TTGACTGGGTGTAGCGGTGG 62.107 60.000 0.00 0.00 0.00 4.61
399 400 0.250124 TTTGACTGGGTGTAGCGGTG 60.250 55.000 0.00 0.00 0.00 4.94
400 401 0.250166 GTTTGACTGGGTGTAGCGGT 60.250 55.000 0.00 0.00 0.00 5.68
401 402 0.250124 TGTTTGACTGGGTGTAGCGG 60.250 55.000 0.00 0.00 0.00 5.52
402 403 0.865769 GTGTTTGACTGGGTGTAGCG 59.134 55.000 0.00 0.00 0.00 4.26
403 404 0.865769 CGTGTTTGACTGGGTGTAGC 59.134 55.000 0.00 0.00 0.00 3.58
404 405 0.865769 GCGTGTTTGACTGGGTGTAG 59.134 55.000 0.00 0.00 0.00 2.74
405 406 0.533308 GGCGTGTTTGACTGGGTGTA 60.533 55.000 0.00 0.00 0.00 2.90
406 407 1.822186 GGCGTGTTTGACTGGGTGT 60.822 57.895 0.00 0.00 0.00 4.16
407 408 2.892334 CGGCGTGTTTGACTGGGTG 61.892 63.158 0.00 0.00 0.00 4.61
408 409 2.590575 CGGCGTGTTTGACTGGGT 60.591 61.111 0.00 0.00 0.00 4.51
409 410 2.184167 AACGGCGTGTTTGACTGGG 61.184 57.895 15.70 0.00 37.59 4.45
410 411 3.416490 AACGGCGTGTTTGACTGG 58.584 55.556 15.70 0.00 37.59 4.00
417 418 1.890510 GGAGGACAAACGGCGTGTT 60.891 57.895 15.70 7.51 44.59 3.32
418 419 2.280592 GGAGGACAAACGGCGTGT 60.281 61.111 15.70 4.43 0.00 4.49
419 420 3.411351 CGGAGGACAAACGGCGTG 61.411 66.667 15.70 4.22 0.00 5.34
423 424 2.046314 ATGGCGGAGGACAAACGG 60.046 61.111 0.00 0.00 32.52 4.44
424 425 2.398554 CCATGGCGGAGGACAAACG 61.399 63.158 0.00 0.00 32.52 3.60
425 426 2.046285 CCCATGGCGGAGGACAAAC 61.046 63.158 6.09 0.00 32.52 2.93
426 427 2.354729 CCCATGGCGGAGGACAAA 59.645 61.111 6.09 0.00 32.52 2.83
427 428 2.933287 ACCCATGGCGGAGGACAA 60.933 61.111 6.09 0.00 32.52 3.18
428 429 3.399181 GACCCATGGCGGAGGACA 61.399 66.667 6.09 0.00 36.56 4.02
429 430 4.176752 GGACCCATGGCGGAGGAC 62.177 72.222 6.09 0.00 36.56 3.85
430 431 4.731853 TGGACCCATGGCGGAGGA 62.732 66.667 6.09 0.00 36.56 3.71
431 432 4.489771 GTGGACCCATGGCGGAGG 62.490 72.222 6.09 0.00 36.56 4.30
432 433 2.947938 GATGTGGACCCATGGCGGAG 62.948 65.000 6.09 0.00 36.56 4.63
433 434 3.014538 ATGTGGACCCATGGCGGA 61.015 61.111 6.09 0.00 36.56 5.54
434 435 2.516930 GATGTGGACCCATGGCGG 60.517 66.667 6.09 0.00 0.00 6.13
435 436 1.524621 GAGATGTGGACCCATGGCG 60.525 63.158 6.09 2.02 0.00 5.69
436 437 1.524621 CGAGATGTGGACCCATGGC 60.525 63.158 6.09 0.00 0.00 4.40
437 438 1.146930 CCGAGATGTGGACCCATGG 59.853 63.158 4.14 4.14 0.00 3.66
438 439 0.462581 CACCGAGATGTGGACCCATG 60.463 60.000 0.68 0.00 32.50 3.66
439 440 0.909610 ACACCGAGATGTGGACCCAT 60.910 55.000 0.00 0.00 40.62 4.00
440 441 1.125093 AACACCGAGATGTGGACCCA 61.125 55.000 0.00 0.00 40.62 4.51
441 442 0.899720 TAACACCGAGATGTGGACCC 59.100 55.000 0.00 0.00 40.62 4.46
442 443 2.754946 TTAACACCGAGATGTGGACC 57.245 50.000 0.00 0.00 40.62 4.46
465 466 5.382664 TGAGAGAGGGTAGGTTTGTTTTT 57.617 39.130 0.00 0.00 0.00 1.94
466 467 5.382664 TTGAGAGAGGGTAGGTTTGTTTT 57.617 39.130 0.00 0.00 0.00 2.43
467 468 5.382664 TTTGAGAGAGGGTAGGTTTGTTT 57.617 39.130 0.00 0.00 0.00 2.83
468 469 5.382664 TTTTGAGAGAGGGTAGGTTTGTT 57.617 39.130 0.00 0.00 0.00 2.83
469 470 5.382664 TTTTTGAGAGAGGGTAGGTTTGT 57.617 39.130 0.00 0.00 0.00 2.83
509 510 2.621526 CCGGCTAGAGGTTTGTGTTTTT 59.378 45.455 0.00 0.00 0.00 1.94
510 511 2.227194 CCGGCTAGAGGTTTGTGTTTT 58.773 47.619 0.00 0.00 0.00 2.43
511 512 1.544759 CCCGGCTAGAGGTTTGTGTTT 60.545 52.381 0.00 0.00 0.00 2.83
512 513 0.036306 CCCGGCTAGAGGTTTGTGTT 59.964 55.000 0.00 0.00 0.00 3.32
513 514 1.677552 CCCGGCTAGAGGTTTGTGT 59.322 57.895 0.00 0.00 0.00 3.72
514 515 1.745489 GCCCGGCTAGAGGTTTGTG 60.745 63.158 0.71 0.00 0.00 3.33
515 516 2.669240 GCCCGGCTAGAGGTTTGT 59.331 61.111 0.71 0.00 0.00 2.83
516 517 2.124695 GGCCCGGCTAGAGGTTTG 60.125 66.667 9.86 0.00 0.00 2.93
517 518 2.285442 AGGCCCGGCTAGAGGTTT 60.285 61.111 9.86 0.00 0.00 3.27
518 519 2.764547 GAGGCCCGGCTAGAGGTT 60.765 66.667 9.86 0.00 0.00 3.50
520 521 4.896829 TCGAGGCCCGGCTAGAGG 62.897 72.222 9.86 0.00 39.14 3.69
521 522 2.148558 GATTCGAGGCCCGGCTAGAG 62.149 65.000 9.86 0.00 39.14 2.43
522 523 2.123425 ATTCGAGGCCCGGCTAGA 60.123 61.111 9.86 1.33 39.14 2.43
523 524 2.148558 GAGATTCGAGGCCCGGCTAG 62.149 65.000 9.86 0.00 39.14 3.42
524 525 2.123425 AGATTCGAGGCCCGGCTA 60.123 61.111 9.86 1.38 39.14 3.93
525 526 3.541713 GAGATTCGAGGCCCGGCT 61.542 66.667 9.86 0.00 39.14 5.52
526 527 3.798954 CTGAGATTCGAGGCCCGGC 62.799 68.421 12.77 0.00 39.14 6.13
527 528 2.419198 CTGAGATTCGAGGCCCGG 59.581 66.667 12.77 0.00 39.14 5.73
528 529 2.279784 GCTGAGATTCGAGGCCCG 60.280 66.667 0.00 2.55 40.25 6.13
529 530 2.110006 GGCTGAGATTCGAGGCCC 59.890 66.667 0.00 0.00 37.12 5.80
530 531 2.110006 GGGCTGAGATTCGAGGCC 59.890 66.667 13.25 13.25 46.57 5.19
531 532 1.092345 GTTGGGCTGAGATTCGAGGC 61.092 60.000 4.36 4.36 0.00 4.70
532 533 0.250234 TGTTGGGCTGAGATTCGAGG 59.750 55.000 0.00 0.00 0.00 4.63
533 534 1.363744 GTGTTGGGCTGAGATTCGAG 58.636 55.000 0.00 0.00 0.00 4.04
534 535 0.036388 GGTGTTGGGCTGAGATTCGA 60.036 55.000 0.00 0.00 0.00 3.71
535 536 0.321564 TGGTGTTGGGCTGAGATTCG 60.322 55.000 0.00 0.00 0.00 3.34
536 537 1.168714 GTGGTGTTGGGCTGAGATTC 58.831 55.000 0.00 0.00 0.00 2.52
537 538 0.606401 CGTGGTGTTGGGCTGAGATT 60.606 55.000 0.00 0.00 0.00 2.40
538 539 1.003355 CGTGGTGTTGGGCTGAGAT 60.003 57.895 0.00 0.00 0.00 2.75
539 540 2.425592 CGTGGTGTTGGGCTGAGA 59.574 61.111 0.00 0.00 0.00 3.27
540 541 2.449031 TAGCGTGGTGTTGGGCTGAG 62.449 60.000 0.00 0.00 36.97 3.35
541 542 1.836999 ATAGCGTGGTGTTGGGCTGA 61.837 55.000 0.00 0.00 36.97 4.26
542 543 1.369091 GATAGCGTGGTGTTGGGCTG 61.369 60.000 0.00 0.00 36.97 4.85
543 544 1.078426 GATAGCGTGGTGTTGGGCT 60.078 57.895 0.00 0.00 39.44 5.19
544 545 2.461110 CGATAGCGTGGTGTTGGGC 61.461 63.158 0.00 0.00 0.00 5.36
545 546 0.806102 CTCGATAGCGTGGTGTTGGG 60.806 60.000 0.00 0.00 38.98 4.12
546 547 0.172578 TCTCGATAGCGTGGTGTTGG 59.827 55.000 0.00 0.00 38.98 3.77
547 548 1.990799 TTCTCGATAGCGTGGTGTTG 58.009 50.000 0.00 0.00 38.98 3.33
548 549 2.736144 TTTCTCGATAGCGTGGTGTT 57.264 45.000 0.00 0.00 38.98 3.32
549 550 2.736144 TTTTCTCGATAGCGTGGTGT 57.264 45.000 0.00 0.00 38.98 4.16
550 551 4.318121 GCTTATTTTCTCGATAGCGTGGTG 60.318 45.833 0.00 0.00 38.98 4.17
551 552 3.802685 GCTTATTTTCTCGATAGCGTGGT 59.197 43.478 0.00 0.00 38.98 4.16
552 553 3.802139 TGCTTATTTTCTCGATAGCGTGG 59.198 43.478 0.00 0.00 38.98 4.94
553 554 4.740205 TCTGCTTATTTTCTCGATAGCGTG 59.260 41.667 0.00 0.00 38.98 5.34
554 555 4.933330 TCTGCTTATTTTCTCGATAGCGT 58.067 39.130 0.00 0.00 38.98 5.07
555 556 5.611412 GCTTCTGCTTATTTTCTCGATAGCG 60.611 44.000 0.00 0.00 35.99 4.26
556 557 5.235186 TGCTTCTGCTTATTTTCTCGATAGC 59.765 40.000 0.00 0.00 40.48 2.97
557 558 6.563753 GCTGCTTCTGCTTATTTTCTCGATAG 60.564 42.308 0.00 0.00 40.48 2.08
558 559 5.235186 GCTGCTTCTGCTTATTTTCTCGATA 59.765 40.000 0.00 0.00 40.48 2.92
559 560 4.034975 GCTGCTTCTGCTTATTTTCTCGAT 59.965 41.667 0.00 0.00 40.48 3.59
560 561 3.372206 GCTGCTTCTGCTTATTTTCTCGA 59.628 43.478 0.00 0.00 40.48 4.04
561 562 3.678662 GCTGCTTCTGCTTATTTTCTCG 58.321 45.455 0.00 0.00 40.48 4.04
562 563 3.678662 CGCTGCTTCTGCTTATTTTCTC 58.321 45.455 0.00 0.00 40.48 2.87
563 564 2.159462 GCGCTGCTTCTGCTTATTTTCT 60.159 45.455 0.00 0.00 40.48 2.52
564 565 2.159462 AGCGCTGCTTCTGCTTATTTTC 60.159 45.455 10.39 0.00 33.89 2.29
565 566 1.815003 AGCGCTGCTTCTGCTTATTTT 59.185 42.857 10.39 0.00 33.89 1.82
566 567 1.457346 AGCGCTGCTTCTGCTTATTT 58.543 45.000 10.39 0.00 33.89 1.40
567 568 1.936547 GTAGCGCTGCTTCTGCTTATT 59.063 47.619 22.90 0.00 40.44 1.40
568 569 1.137872 AGTAGCGCTGCTTCTGCTTAT 59.862 47.619 23.18 0.00 40.44 1.73
569 570 0.532573 AGTAGCGCTGCTTCTGCTTA 59.467 50.000 23.18 0.00 40.44 3.09
570 571 1.018226 CAGTAGCGCTGCTTCTGCTT 61.018 55.000 26.24 0.00 44.33 3.91
571 572 1.447489 CAGTAGCGCTGCTTCTGCT 60.447 57.895 26.24 0.28 44.33 4.24
572 573 3.088044 CAGTAGCGCTGCTTCTGC 58.912 61.111 26.24 0.00 44.33 4.26
584 585 4.880537 CCTCAGCGCCGGCAGTAG 62.881 72.222 28.98 16.96 43.41 2.57
590 591 3.997064 CTGTTCTCCTCAGCGCCGG 62.997 68.421 2.29 0.00 0.00 6.13
591 592 2.507992 CTGTTCTCCTCAGCGCCG 60.508 66.667 2.29 0.00 0.00 6.46
592 593 1.446966 GTCTGTTCTCCTCAGCGCC 60.447 63.158 2.29 0.00 33.48 6.53
593 594 1.803519 CGTCTGTTCTCCTCAGCGC 60.804 63.158 0.00 0.00 33.48 5.92
594 595 0.241213 TTCGTCTGTTCTCCTCAGCG 59.759 55.000 0.00 0.00 35.53 5.18
595 596 2.440539 TTTCGTCTGTTCTCCTCAGC 57.559 50.000 0.00 0.00 33.48 4.26
596 597 3.060602 GGTTTTCGTCTGTTCTCCTCAG 58.939 50.000 0.00 0.00 0.00 3.35
597 598 2.698797 AGGTTTTCGTCTGTTCTCCTCA 59.301 45.455 0.00 0.00 0.00 3.86
598 599 3.388345 AGGTTTTCGTCTGTTCTCCTC 57.612 47.619 0.00 0.00 0.00 3.71
599 600 3.006644 GGTAGGTTTTCGTCTGTTCTCCT 59.993 47.826 0.00 0.00 0.00 3.69
600 601 3.324117 GGTAGGTTTTCGTCTGTTCTCC 58.676 50.000 0.00 0.00 0.00 3.71
601 602 3.006644 AGGGTAGGTTTTCGTCTGTTCTC 59.993 47.826 0.00 0.00 0.00 2.87
602 603 2.970640 AGGGTAGGTTTTCGTCTGTTCT 59.029 45.455 0.00 0.00 0.00 3.01
603 604 3.064931 CAGGGTAGGTTTTCGTCTGTTC 58.935 50.000 0.00 0.00 0.00 3.18
604 605 2.809299 GCAGGGTAGGTTTTCGTCTGTT 60.809 50.000 0.00 0.00 0.00 3.16
605 606 1.270678 GCAGGGTAGGTTTTCGTCTGT 60.271 52.381 0.00 0.00 0.00 3.41
606 607 1.439679 GCAGGGTAGGTTTTCGTCTG 58.560 55.000 0.00 0.00 0.00 3.51
607 608 0.323957 GGCAGGGTAGGTTTTCGTCT 59.676 55.000 0.00 0.00 0.00 4.18
608 609 1.017701 CGGCAGGGTAGGTTTTCGTC 61.018 60.000 0.00 0.00 0.00 4.20
609 610 1.004200 CGGCAGGGTAGGTTTTCGT 60.004 57.895 0.00 0.00 0.00 3.85
610 611 1.743995 CCGGCAGGGTAGGTTTTCG 60.744 63.158 0.00 0.00 0.00 3.46
611 612 2.044555 GCCGGCAGGGTAGGTTTTC 61.045 63.158 24.80 0.00 38.44 2.29
612 613 2.035155 GCCGGCAGGGTAGGTTTT 59.965 61.111 24.80 0.00 38.44 2.43
676 677 3.497031 GCTGGTAAGGGCGAACGC 61.497 66.667 10.81 10.81 41.06 4.84
677 678 2.818274 GGCTGGTAAGGGCGAACG 60.818 66.667 0.00 0.00 0.00 3.95
683 684 4.489771 CTGGCCGGCTGGTAAGGG 62.490 72.222 28.56 3.87 37.67 3.95
693 694 4.803908 GAAGGGAAGGCTGGCCGG 62.804 72.222 7.41 7.41 41.95 6.13
694 695 4.803908 GGAAGGGAAGGCTGGCCG 62.804 72.222 5.93 0.00 41.95 6.13
695 696 2.918300 GATGGAAGGGAAGGCTGGCC 62.918 65.000 3.00 3.00 0.00 5.36
696 697 1.454663 GATGGAAGGGAAGGCTGGC 60.455 63.158 0.00 0.00 0.00 4.85
697 698 0.182299 GAGATGGAAGGGAAGGCTGG 59.818 60.000 0.00 0.00 0.00 4.85
698 699 0.182299 GGAGATGGAAGGGAAGGCTG 59.818 60.000 0.00 0.00 0.00 4.85
699 700 0.045469 AGGAGATGGAAGGGAAGGCT 59.955 55.000 0.00 0.00 0.00 4.58
700 701 0.922626 AAGGAGATGGAAGGGAAGGC 59.077 55.000 0.00 0.00 0.00 4.35
701 702 2.200081 TGAAGGAGATGGAAGGGAAGG 58.800 52.381 0.00 0.00 0.00 3.46
702 703 4.205587 CAATGAAGGAGATGGAAGGGAAG 58.794 47.826 0.00 0.00 0.00 3.46
703 704 3.625716 GCAATGAAGGAGATGGAAGGGAA 60.626 47.826 0.00 0.00 0.00 3.97
704 705 2.092212 GCAATGAAGGAGATGGAAGGGA 60.092 50.000 0.00 0.00 0.00 4.20
738 739 4.035102 GCAACGAAGGGGAGGCCT 62.035 66.667 3.86 3.86 0.00 5.19
751 783 0.735287 GGACTAGGACGAACGGCAAC 60.735 60.000 1.79 0.00 0.00 4.17
761 793 5.300792 CCTGATTCTGTTCTAGGACTAGGAC 59.699 48.000 10.27 10.27 41.12 3.85
768 800 3.713003 TGCTCCTGATTCTGTTCTAGGA 58.287 45.455 0.00 0.00 36.23 2.94
769 801 4.187694 GTTGCTCCTGATTCTGTTCTAGG 58.812 47.826 0.00 0.00 0.00 3.02
770 802 4.187694 GGTTGCTCCTGATTCTGTTCTAG 58.812 47.826 0.00 0.00 0.00 2.43
771 803 3.055094 GGGTTGCTCCTGATTCTGTTCTA 60.055 47.826 0.00 0.00 36.25 2.10
772 804 2.290577 GGGTTGCTCCTGATTCTGTTCT 60.291 50.000 0.00 0.00 36.25 3.01
774 806 1.611673 CGGGTTGCTCCTGATTCTGTT 60.612 52.381 1.90 0.00 45.09 3.16
775 807 0.036010 CGGGTTGCTCCTGATTCTGT 60.036 55.000 1.90 0.00 45.09 3.41
776 808 0.745845 CCGGGTTGCTCCTGATTCTG 60.746 60.000 0.00 0.00 45.09 3.02
777 809 1.604378 CCGGGTTGCTCCTGATTCT 59.396 57.895 0.00 0.00 45.09 2.40
778 810 2.115291 GCCGGGTTGCTCCTGATTC 61.115 63.158 2.18 0.00 45.09 2.52
779 811 2.044946 GCCGGGTTGCTCCTGATT 60.045 61.111 2.18 0.00 45.09 2.57
780 812 4.473520 CGCCGGGTTGCTCCTGAT 62.474 66.667 2.18 0.00 45.09 2.90
801 833 2.504681 CAATTGCCGAAGTGCGCC 60.505 61.111 4.18 0.00 39.11 6.53
802 834 2.082366 CACAATTGCCGAAGTGCGC 61.082 57.895 5.05 0.00 39.11 6.09
803 835 0.998226 CACACAATTGCCGAAGTGCG 60.998 55.000 5.05 0.00 35.47 5.34
804 836 0.310543 TCACACAATTGCCGAAGTGC 59.689 50.000 5.05 0.00 35.47 4.40
805 837 2.995466 ATCACACAATTGCCGAAGTG 57.005 45.000 5.05 7.22 37.95 3.16
806 838 3.674997 AGTATCACACAATTGCCGAAGT 58.325 40.909 5.05 0.00 0.00 3.01
808 840 6.561737 TTAAAGTATCACACAATTGCCGAA 57.438 33.333 5.05 0.00 0.00 4.30
809 841 6.550843 CATTAAAGTATCACACAATTGCCGA 58.449 36.000 5.05 0.00 0.00 5.54
810 842 5.229887 GCATTAAAGTATCACACAATTGCCG 59.770 40.000 5.05 0.00 0.00 5.69
811 843 5.519927 GGCATTAAAGTATCACACAATTGCC 59.480 40.000 5.05 0.00 0.00 4.52
812 844 6.332630 AGGCATTAAAGTATCACACAATTGC 58.667 36.000 5.05 0.00 0.00 3.56
813 845 8.028354 TCAAGGCATTAAAGTATCACACAATTG 58.972 33.333 3.24 3.24 0.00 2.32
814 846 8.121305 TCAAGGCATTAAAGTATCACACAATT 57.879 30.769 0.00 0.00 0.00 2.32
830 901 6.311935 CGTTTCAATGATTCAATCAAGGCATT 59.688 34.615 3.63 0.00 43.50 3.56
833 904 5.061311 CACGTTTCAATGATTCAATCAAGGC 59.939 40.000 3.63 0.00 43.50 4.35
840 911 9.599866 ACTATAGATCACGTTTCAATGATTCAA 57.400 29.630 6.78 0.00 35.67 2.69
857 928 8.301002 AGAGGAACGCATTAAGAACTATAGATC 58.699 37.037 6.78 4.08 0.00 2.75
861 932 7.709613 GGAAAGAGGAACGCATTAAGAACTATA 59.290 37.037 0.00 0.00 0.00 1.31
862 933 6.539103 GGAAAGAGGAACGCATTAAGAACTAT 59.461 38.462 0.00 0.00 0.00 2.12
877 948 2.673775 TGGCAACATGGAAAGAGGAA 57.326 45.000 0.00 0.00 46.17 3.36
890 961 3.253188 TGCAGAATTACAAGACTGGCAAC 59.747 43.478 0.00 0.00 0.00 4.17
894 965 4.999950 AGAAGTGCAGAATTACAAGACTGG 59.000 41.667 0.00 0.00 0.00 4.00
899 970 7.041780 ACAGTTACAGAAGTGCAGAATTACAAG 60.042 37.037 0.00 0.00 39.29 3.16
917 988 5.010933 TGTTTCCTGGTTTCAACAGTTACA 58.989 37.500 0.00 0.00 34.16 2.41
922 993 3.636300 TCCATGTTTCCTGGTTTCAACAG 59.364 43.478 0.00 0.00 32.80 3.16
930 1001 2.242043 CAAGCTTCCATGTTTCCTGGT 58.758 47.619 0.00 0.00 35.19 4.00
936 1007 0.314935 CGGTGCAAGCTTCCATGTTT 59.685 50.000 0.00 0.00 0.00 2.83
960 1031 9.793259 TCTGAGGTTATGTTAAGATTTTGAAGT 57.207 29.630 0.00 0.00 0.00 3.01
973 1044 4.899457 TCGGGTCATATCTGAGGTTATGTT 59.101 41.667 4.17 0.00 30.18 2.71
1042 1113 6.837568 TCGTCTAGGTAGTCCCTTTCAAATAT 59.162 38.462 0.00 0.00 42.73 1.28
1077 1148 0.464554 CTTCGGGCTCCAATTCCTCC 60.465 60.000 0.00 0.00 0.00 4.30
1114 1185 2.324541 CCATGGTTCCTTTGGTTTCCA 58.675 47.619 2.57 0.00 0.00 3.53
1132 1203 3.264450 GGGAGAAGAGAATGAAAGTCCCA 59.736 47.826 0.00 0.00 41.88 4.37
1133 1204 3.371059 GGGGAGAAGAGAATGAAAGTCCC 60.371 52.174 0.00 0.00 41.60 4.46
1134 1205 3.371059 GGGGGAGAAGAGAATGAAAGTCC 60.371 52.174 0.00 0.00 0.00 3.85
1152 1223 4.052518 CTGGGGAAGTGCTGGGGG 62.053 72.222 0.00 0.00 0.00 5.40
1209 1280 1.726853 GCGTAAGGCACATCTGAAGT 58.273 50.000 0.00 0.00 42.87 3.01
1238 1309 7.675478 TCTCATGATTAAAGAACGATTCAACG 58.325 34.615 0.00 0.00 39.31 4.10
1239 1310 9.825972 TTTCTCATGATTAAAGAACGATTCAAC 57.174 29.630 0.00 0.00 0.00 3.18
1257 1328 5.271625 GCAGAGTGCAATATGTTTCTCATG 58.728 41.667 10.76 2.28 44.26 3.07
1258 1329 5.496133 GCAGAGTGCAATATGTTTCTCAT 57.504 39.130 10.76 0.00 44.26 2.90
1275 1350 2.553765 ATCAAGCCAGGCCTGCAGAG 62.554 60.000 28.39 14.81 0.00 3.35
1277 1352 2.044252 ATCAAGCCAGGCCTGCAG 60.044 61.111 28.39 15.99 0.00 4.41
1279 1354 2.832201 GGATCAAGCCAGGCCTGC 60.832 66.667 28.39 21.70 0.00 4.85
1322 1397 2.292267 CCACAGAAGTCACAGCAACTT 58.708 47.619 0.00 0.00 39.61 2.66
1350 1425 0.743688 ACCTGCATGACAAAACGCAA 59.256 45.000 0.00 0.00 33.21 4.85
1386 1461 0.813821 ACGACCGGGTAGAGTTAAGC 59.186 55.000 14.54 0.00 0.00 3.09
1444 1523 1.119684 TCTGGCACGTATACCTGCAT 58.880 50.000 22.79 0.00 34.90 3.96
1479 1561 2.282180 AATGCGCGGTGGAAGGTT 60.282 55.556 8.83 0.00 0.00 3.50
1484 1566 1.599518 ACAAAGAATGCGCGGTGGA 60.600 52.632 8.83 0.00 0.00 4.02
1545 1627 1.492133 CCTTGTCCTTCCCCTGCTCA 61.492 60.000 0.00 0.00 0.00 4.26
1562 1644 2.172293 CTCCTTCTAGGATTTGCTGCCT 59.828 50.000 0.00 0.00 44.81 4.75
1698 1784 9.077885 GGAGTATAAAATGCATTAATTCTGGGA 57.922 33.333 13.39 0.00 0.00 4.37
1744 1830 3.012518 CTCCTGAACATTGTGATCCCAC 58.987 50.000 0.00 0.00 43.46 4.61
1883 1974 3.508845 AGGGAAACTTGTGCTGTACAT 57.491 42.857 0.00 0.00 39.48 2.29
1992 2084 9.825972 CTTAACATACAGTACACCAATTCAAAG 57.174 33.333 0.00 0.00 0.00 2.77
2005 2097 5.160607 AGTGCCTTGCTTAACATACAGTA 57.839 39.130 0.00 0.00 0.00 2.74
2007 2099 5.643777 ACTTAGTGCCTTGCTTAACATACAG 59.356 40.000 0.00 0.00 0.00 2.74
2071 2163 2.086869 CACCAATCACAAAGCCGAGAT 58.913 47.619 0.00 0.00 0.00 2.75
2072 2164 1.202758 ACACCAATCACAAAGCCGAGA 60.203 47.619 0.00 0.00 0.00 4.04
2208 2300 8.489489 AGATATTTCAGTATTCAAGCAGGAGAA 58.511 33.333 0.00 0.00 0.00 2.87
2235 2327 3.891366 CAGAGAGTTCCCCAACAAAACAT 59.109 43.478 0.00 0.00 34.60 2.71
2243 2335 2.348472 ACATTCCAGAGAGTTCCCCAA 58.652 47.619 0.00 0.00 0.00 4.12
2248 2340 9.620259 ATTCCTAAATAACATTCCAGAGAGTTC 57.380 33.333 0.00 0.00 0.00 3.01
2250 2342 9.401058 CAATTCCTAAATAACATTCCAGAGAGT 57.599 33.333 0.00 0.00 0.00 3.24
2258 2353 7.495279 TGCCAATGCAATTCCTAAATAACATTC 59.505 33.333 0.00 0.00 46.66 2.67
2348 2443 0.030638 GCAAAGAACCTTTCGCTGCA 59.969 50.000 0.00 0.00 40.00 4.41
2362 2457 8.739972 ACCTAAATAACACTGAAATAGGCAAAG 58.260 33.333 0.00 0.00 33.35 2.77
2365 2460 7.630082 AGACCTAAATAACACTGAAATAGGCA 58.370 34.615 0.00 0.00 33.35 4.75
2549 2644 4.969484 ACTGCATCATAGCATCTGATTCA 58.031 39.130 0.00 0.00 44.68 2.57
2561 2656 7.455891 ACTGATCCATGAATAACTGCATCATA 58.544 34.615 0.00 0.00 32.73 2.15
2828 2941 8.252624 ACAAAGACCTAACTCTAGTTTTCTCT 57.747 34.615 0.00 0.00 39.31 3.10
2866 2979 7.774134 AGACAATGCATCATGTAAAATAGCAA 58.226 30.769 0.00 0.00 33.91 3.91
2917 3030 5.221303 CCAAATGATGACCAGAACACTTGTT 60.221 40.000 0.00 0.00 41.64 2.83
2918 3031 4.279169 CCAAATGATGACCAGAACACTTGT 59.721 41.667 0.00 0.00 0.00 3.16
2921 3034 3.181429 ACCCAAATGATGACCAGAACACT 60.181 43.478 0.00 0.00 0.00 3.55
2977 3092 5.598416 TCAGACCAATACCTAGTCATGTG 57.402 43.478 0.00 0.00 32.82 3.21
2990 3266 1.210234 TGCCGACATCATCAGACCAAT 59.790 47.619 0.00 0.00 0.00 3.16
3006 3282 0.108615 AGAAGGTCGATCAAGTGCCG 60.109 55.000 0.00 0.00 0.00 5.69
3059 3340 2.628178 CGTTGTATAGGAGAGCCCATCA 59.372 50.000 0.00 0.00 37.41 3.07
3060 3341 2.628657 ACGTTGTATAGGAGAGCCCATC 59.371 50.000 0.00 0.00 37.41 3.51
3061 3342 2.679082 ACGTTGTATAGGAGAGCCCAT 58.321 47.619 0.00 0.00 37.41 4.00
3062 3343 2.154567 ACGTTGTATAGGAGAGCCCA 57.845 50.000 0.00 0.00 37.41 5.36
3063 3344 2.822764 CAACGTTGTATAGGAGAGCCC 58.177 52.381 20.21 0.00 33.31 5.19
3067 3348 2.159338 GGACGCAACGTTGTATAGGAGA 60.159 50.000 27.78 0.00 41.37 3.71
3103 3384 7.970061 ACGACCAAAAATCATGATTCATTACAG 59.030 33.333 20.95 12.87 0.00 2.74
3109 3390 5.956068 TGACGACCAAAAATCATGATTCA 57.044 34.783 20.95 8.89 0.00 2.57
3134 3415 1.000019 AGACATGCTGCAAGGCCAT 60.000 52.632 6.36 0.00 0.00 4.40
3241 3522 7.063780 CGAATTGGCTAAAAATCTTCTTGCAAT 59.936 33.333 0.00 0.00 0.00 3.56
3277 3560 5.728049 CGTAGAAAGTTGTTGCATAATCGTG 59.272 40.000 0.00 0.00 0.00 4.35
3380 3665 6.594159 AGAAATGTTATGAGAATCGACGGTTT 59.406 34.615 0.00 0.00 38.61 3.27
3385 3670 9.430838 CATGAAAGAAATGTTATGAGAATCGAC 57.569 33.333 0.00 0.00 38.61 4.20
3458 3743 7.384660 TGTTGCAATAGCTTATTTTGTTTCTGG 59.615 33.333 0.59 0.00 42.74 3.86
3473 3758 8.693542 ACTGAGATTTTTAATGTTGCAATAGC 57.306 30.769 0.59 0.00 42.57 2.97
3521 3806 4.263905 GCATGGGAGGTGGGATATTGATAA 60.264 45.833 0.00 0.00 0.00 1.75
3553 3843 0.188342 ACACAAGCCACAAGGGGAAT 59.812 50.000 0.00 0.00 37.04 3.01
3583 3873 1.202842 TGCATAGCACCTCATCATGGG 60.203 52.381 0.00 0.00 31.71 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.