Multiple sequence alignment - TraesCS7D01G520900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G520900 chr7D 100.000 3436 0 0 1 3436 618315255 618311820 0.000000e+00 6346.0
1 TraesCS7D01G520900 chr7A 91.812 2003 109 10 684 2633 712052544 712050544 0.000000e+00 2739.0
2 TraesCS7D01G520900 chr7A 87.455 550 42 14 1 537 712053876 712053341 2.930000e-170 608.0
3 TraesCS7D01G520900 chr7A 92.905 296 9 4 2829 3112 712050560 712050265 1.470000e-113 420.0
4 TraesCS7D01G520900 chr7B 92.934 1755 113 5 889 2633 712725770 712724017 0.000000e+00 2543.0
5 TraesCS7D01G520900 chr7B 92.470 903 40 10 1 894 712726681 712725798 0.000000e+00 1266.0
6 TraesCS7D01G520900 chr7B 89.848 197 16 3 2637 2830 67668396 67668201 2.050000e-62 250.0
7 TraesCS7D01G520900 chr7B 89.796 98 7 2 2634 2728 549536624 549536721 4.660000e-24 122.0
8 TraesCS7D01G520900 chr1D 80.153 1305 196 36 1153 2423 7906944 7905669 0.000000e+00 917.0
9 TraesCS7D01G520900 chr1A 79.036 1307 208 38 1153 2423 9563006 9561730 0.000000e+00 835.0
10 TraesCS7D01G520900 chr1A 79.121 364 60 11 1753 2111 9367486 9367134 1.590000e-58 237.0
11 TraesCS7D01G520900 chr3B 93.137 204 11 3 2639 2839 812693274 812693477 2.590000e-76 296.0
12 TraesCS7D01G520900 chr3B 85.366 123 10 6 2633 2752 783109280 783109397 1.670000e-23 121.0
13 TraesCS7D01G520900 chr3D 90.141 213 16 4 2632 2839 460496122 460495910 4.370000e-69 272.0
14 TraesCS7D01G520900 chr3D 79.167 120 20 5 2682 2797 597545837 597545719 1.020000e-10 78.7
15 TraesCS7D01G520900 chr4A 94.253 174 7 2 2633 2803 656814623 656814450 2.630000e-66 263.0
16 TraesCS7D01G520900 chr6B 90.116 172 12 4 2633 2800 3646788 3646958 5.770000e-53 219.0
17 TraesCS7D01G520900 chr3A 89.412 170 16 1 2633 2800 602913949 602913780 2.690000e-51 213.0
18 TraesCS7D01G520900 chr2A 83.163 196 25 5 2636 2824 743583813 743583619 4.560000e-39 172.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G520900 chr7D 618311820 618315255 3435 True 6346.000000 6346 100.000 1 3436 1 chr7D.!!$R1 3435
1 TraesCS7D01G520900 chr7A 712050265 712053876 3611 True 1255.666667 2739 90.724 1 3112 3 chr7A.!!$R1 3111
2 TraesCS7D01G520900 chr7B 712724017 712726681 2664 True 1904.500000 2543 92.702 1 2633 2 chr7B.!!$R2 2632
3 TraesCS7D01G520900 chr1D 7905669 7906944 1275 True 917.000000 917 80.153 1153 2423 1 chr1D.!!$R1 1270
4 TraesCS7D01G520900 chr1A 9561730 9563006 1276 True 835.000000 835 79.036 1153 2423 1 chr1A.!!$R2 1270

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
279 281 0.034337 TGTACGAACTCTTGGTGCCC 59.966 55.0 0.0 0.0 0.0 5.36 F
908 1630 0.108898 CACTCGCTCCCTCACTCTTG 60.109 60.0 0.0 0.0 0.0 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2136 2893 0.459237 CTCTCGCCAGTGGTCATCAC 60.459 60.0 11.74 0.0 46.39 3.06 R
2657 3424 0.036858 GTTTGAGCTCTTCTCGGGCT 60.037 55.0 16.19 0.0 44.86 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 80 1.453155 AGTTGATGGCCTTTGCTACG 58.547 50.000 3.32 0.00 37.74 3.51
101 102 9.394832 CTACGGTGGATAGTAGACCATGAATGG 62.395 48.148 7.82 7.82 41.99 3.16
199 201 4.518970 GGAGTTTCTTAACTGCCATTGTCA 59.481 41.667 0.00 0.00 44.51 3.58
200 202 5.183904 GGAGTTTCTTAACTGCCATTGTCAT 59.816 40.000 0.00 0.00 44.51 3.06
201 203 6.294731 GGAGTTTCTTAACTGCCATTGTCATT 60.295 38.462 0.00 0.00 44.51 2.57
202 204 7.054491 AGTTTCTTAACTGCCATTGTCATTT 57.946 32.000 0.00 0.00 42.91 2.32
203 205 8.177119 AGTTTCTTAACTGCCATTGTCATTTA 57.823 30.769 0.00 0.00 42.91 1.40
279 281 0.034337 TGTACGAACTCTTGGTGCCC 59.966 55.000 0.00 0.00 0.00 5.36
551 613 6.893005 AGAGAGCACTATAGTTTAGTTCAGGT 59.107 38.462 1.56 0.00 0.00 4.00
571 633 3.744426 GGTTTTTAGTTGCGCTCACTAGA 59.256 43.478 9.73 7.68 0.00 2.43
597 659 8.894768 ATGATTTTAGGACACTTAGTAGCATC 57.105 34.615 0.00 0.00 0.00 3.91
733 1402 3.699538 ACTTGTTTCAAGTTCCCTTCACC 59.300 43.478 9.00 0.00 0.00 4.02
762 1431 1.329906 GCTCGACATGCAGAATTCCAG 59.670 52.381 0.65 0.00 0.00 3.86
908 1630 0.108898 CACTCGCTCCCTCACTCTTG 60.109 60.000 0.00 0.00 0.00 3.02
972 1694 2.355197 CTGTTAATGGTCGCCATCACA 58.645 47.619 11.08 14.16 44.40 3.58
982 1704 2.412089 GTCGCCATCACAACTCAAGTAC 59.588 50.000 0.00 0.00 0.00 2.73
1068 1790 3.669036 CTCCGTCGTCCTCACGCTG 62.669 68.421 0.00 0.00 46.28 5.18
1074 1796 4.314440 GTCCTCACGCTGGTGCCA 62.314 66.667 0.00 0.00 44.03 4.92
1097 1819 1.268234 GCCGCAGAAATCATTCTTCCG 60.268 52.381 0.00 0.00 43.43 4.30
1176 1910 1.445582 CGGTGGTTGCGACTACTCC 60.446 63.158 18.93 3.98 37.41 3.85
1289 2026 0.538977 AGGAACGACTCGTCCTTCCA 60.539 55.000 21.62 0.00 43.03 3.53
1308 2045 4.440127 CAATGGCGCTGGCAACCC 62.440 66.667 7.64 0.00 42.43 4.11
1682 2435 4.451150 GTCGACCGCATCCTGCCA 62.451 66.667 3.51 0.00 41.12 4.92
1707 2460 0.536260 AAGCAACAAAGGTGCAAGCA 59.464 45.000 9.92 0.00 36.26 3.91
1709 2462 1.139455 AGCAACAAAGGTGCAAGCATT 59.861 42.857 9.92 0.00 36.26 3.56
1718 2471 1.682005 TGCAAGCATTACCAGGGGC 60.682 57.895 0.00 0.00 0.00 5.80
1781 2534 3.490759 GGTGCCGATGTGCTCGTG 61.491 66.667 0.00 0.00 46.18 4.35
1918 2675 4.789807 AGAGCTGCATTGATCCATACTTT 58.210 39.130 1.02 0.00 0.00 2.66
2021 2778 2.356135 GTGAAAGATTGGGCGCTAAGA 58.644 47.619 7.64 0.00 0.00 2.10
2023 2780 3.009723 TGAAAGATTGGGCGCTAAGAAG 58.990 45.455 7.64 0.00 0.00 2.85
2125 2882 2.741985 CTCATGCGCGGACCAACA 60.742 61.111 8.83 0.00 0.00 3.33
2129 2886 4.980805 TGCGCGGACCAACAGGAC 62.981 66.667 8.83 0.00 0.00 3.85
2135 2892 2.358737 GACCAACAGGACCCGCTG 60.359 66.667 0.00 0.00 0.00 5.18
2136 2893 3.901797 GACCAACAGGACCCGCTGG 62.902 68.421 0.00 0.00 37.80 4.85
2171 2931 2.097629 CGAGAGCGACCAAGAGTATTCA 59.902 50.000 0.00 0.00 40.82 2.57
2219 2982 0.385098 CACGACGCACGAGTAGACAA 60.385 55.000 9.43 0.00 45.77 3.18
2432 3195 1.200020 GGCATGAGGTCGGTCAAAAAG 59.800 52.381 0.00 0.00 0.00 2.27
2473 3237 2.098607 CACCAATTCTACATGCCTGCAG 59.901 50.000 6.78 6.78 0.00 4.41
2541 3305 9.863845 GAATTAGCAGAGATTTAGATAGGGTAC 57.136 37.037 0.00 0.00 0.00 3.34
2542 3306 8.958060 ATTAGCAGAGATTTAGATAGGGTACA 57.042 34.615 0.00 0.00 0.00 2.90
2593 3360 7.906160 AGCATAAAGATGTATGTAACGTGTTC 58.094 34.615 0.00 0.00 34.51 3.18
2610 3377 1.204941 GTTCGACTCTGGCACATAGGT 59.795 52.381 0.00 0.00 36.82 3.08
2611 3378 2.426024 GTTCGACTCTGGCACATAGGTA 59.574 50.000 0.00 0.00 36.82 3.08
2612 3379 2.298610 TCGACTCTGGCACATAGGTAG 58.701 52.381 0.00 0.00 36.82 3.18
2614 3381 1.069358 GACTCTGGCACATAGGTAGGC 59.931 57.143 0.00 0.00 36.82 3.93
2615 3382 1.123077 CTCTGGCACATAGGTAGGCA 58.877 55.000 6.19 6.19 38.20 4.75
2616 3383 3.694364 CTGGCACATAGGTAGGCAG 57.306 57.895 15.12 15.12 46.99 4.85
2617 3384 0.533755 CTGGCACATAGGTAGGCAGC 60.534 60.000 16.10 0.42 46.55 5.25
2618 3385 1.271127 TGGCACATAGGTAGGCAGCA 61.271 55.000 0.00 0.00 33.64 4.41
2619 3386 0.533755 GGCACATAGGTAGGCAGCAG 60.534 60.000 0.00 0.00 0.00 4.24
2620 3387 0.533755 GCACATAGGTAGGCAGCAGG 60.534 60.000 0.00 0.00 0.00 4.85
2621 3388 1.123077 CACATAGGTAGGCAGCAGGA 58.877 55.000 0.00 0.00 0.00 3.86
2622 3389 1.123928 ACATAGGTAGGCAGCAGGAC 58.876 55.000 0.00 0.00 0.00 3.85
2623 3390 0.394565 CATAGGTAGGCAGCAGGACC 59.605 60.000 0.00 0.00 0.00 4.46
2624 3391 0.764752 ATAGGTAGGCAGCAGGACCC 60.765 60.000 6.08 0.00 31.93 4.46
2625 3392 2.891307 TAGGTAGGCAGCAGGACCCC 62.891 65.000 6.08 0.00 31.93 4.95
2626 3393 4.162690 GTAGGCAGCAGGACCCCG 62.163 72.222 0.00 0.00 0.00 5.73
2631 3398 3.000819 CAGCAGGACCCCGGTGTA 61.001 66.667 0.00 0.00 0.00 2.90
2632 3399 2.040606 AGCAGGACCCCGGTGTAT 59.959 61.111 0.00 0.00 0.00 2.29
2633 3400 1.615424 AGCAGGACCCCGGTGTATT 60.615 57.895 0.00 0.00 0.00 1.89
2634 3401 1.205460 AGCAGGACCCCGGTGTATTT 61.205 55.000 0.00 0.00 0.00 1.40
2635 3402 0.323087 GCAGGACCCCGGTGTATTTT 60.323 55.000 0.00 0.00 0.00 1.82
2636 3403 1.889262 GCAGGACCCCGGTGTATTTTT 60.889 52.381 0.00 0.00 0.00 1.94
2655 3422 1.541379 TTTTAGAGAAAAGGCCGGCC 58.459 50.000 39.29 39.29 30.89 6.13
2656 3423 0.675522 TTTAGAGAAAAGGCCGGCCG 60.676 55.000 38.88 21.04 41.95 6.13
2657 3424 1.546589 TTAGAGAAAAGGCCGGCCGA 61.547 55.000 38.88 15.21 41.95 5.54
2658 3425 1.956629 TAGAGAAAAGGCCGGCCGAG 61.957 60.000 38.88 18.40 41.95 4.63
2669 3436 4.214327 GGCCGAGCCCGAGAAGAG 62.214 72.222 3.73 0.00 44.06 2.85
2670 3437 4.882396 GCCGAGCCCGAGAAGAGC 62.882 72.222 0.00 0.00 38.22 4.09
2671 3438 3.144193 CCGAGCCCGAGAAGAGCT 61.144 66.667 0.00 0.00 40.24 4.09
2674 3441 4.120244 AGCCCGAGAAGAGCTCAA 57.880 55.556 17.77 0.00 44.15 3.02
2675 3442 2.366469 AGCCCGAGAAGAGCTCAAA 58.634 52.632 17.77 0.00 44.15 2.69
2676 3443 0.036858 AGCCCGAGAAGAGCTCAAAC 60.037 55.000 17.77 6.60 44.15 2.93
2677 3444 1.021920 GCCCGAGAAGAGCTCAAACC 61.022 60.000 17.77 1.48 44.15 3.27
2678 3445 0.610687 CCCGAGAAGAGCTCAAACCT 59.389 55.000 17.77 6.69 44.15 3.50
2679 3446 1.825474 CCCGAGAAGAGCTCAAACCTA 59.175 52.381 17.77 0.00 44.15 3.08
2680 3447 2.233922 CCCGAGAAGAGCTCAAACCTAA 59.766 50.000 17.77 0.00 44.15 2.69
2681 3448 3.254892 CCGAGAAGAGCTCAAACCTAAC 58.745 50.000 17.77 0.00 44.15 2.34
2682 3449 3.254892 CGAGAAGAGCTCAAACCTAACC 58.745 50.000 17.77 0.00 44.15 2.85
2683 3450 3.601435 GAGAAGAGCTCAAACCTAACCC 58.399 50.000 17.77 0.00 43.38 4.11
2684 3451 2.028020 AGAAGAGCTCAAACCTAACCCG 60.028 50.000 17.77 0.00 0.00 5.28
2685 3452 0.613777 AGAGCTCAAACCTAACCCGG 59.386 55.000 17.77 0.00 0.00 5.73
2686 3453 1.002502 AGCTCAAACCTAACCCGGC 60.003 57.895 0.00 0.00 0.00 6.13
2687 3454 1.002502 GCTCAAACCTAACCCGGCT 60.003 57.895 0.00 0.00 0.00 5.52
2688 3455 0.608308 GCTCAAACCTAACCCGGCTT 60.608 55.000 0.00 0.00 0.00 4.35
2689 3456 1.905637 CTCAAACCTAACCCGGCTTT 58.094 50.000 0.00 0.00 0.00 3.51
2690 3457 1.539827 CTCAAACCTAACCCGGCTTTG 59.460 52.381 0.00 0.00 31.85 2.77
2691 3458 1.143277 TCAAACCTAACCCGGCTTTGA 59.857 47.619 0.00 0.00 34.62 2.69
2692 3459 1.957877 CAAACCTAACCCGGCTTTGAA 59.042 47.619 0.00 0.00 32.06 2.69
2693 3460 2.560981 CAAACCTAACCCGGCTTTGAAT 59.439 45.455 0.00 0.00 32.06 2.57
2694 3461 2.597578 ACCTAACCCGGCTTTGAATT 57.402 45.000 0.00 0.00 0.00 2.17
2695 3462 3.724732 ACCTAACCCGGCTTTGAATTA 57.275 42.857 0.00 0.00 0.00 1.40
2696 3463 4.036941 ACCTAACCCGGCTTTGAATTAA 57.963 40.909 0.00 0.00 0.00 1.40
2697 3464 3.760151 ACCTAACCCGGCTTTGAATTAAC 59.240 43.478 0.00 0.00 0.00 2.01
2698 3465 3.759618 CCTAACCCGGCTTTGAATTAACA 59.240 43.478 0.00 0.00 0.00 2.41
2699 3466 4.218852 CCTAACCCGGCTTTGAATTAACAA 59.781 41.667 0.00 0.00 0.00 2.83
2700 3467 4.674281 AACCCGGCTTTGAATTAACAAA 57.326 36.364 0.00 0.00 37.98 2.83
2701 3468 4.674281 ACCCGGCTTTGAATTAACAAAA 57.326 36.364 0.00 0.00 38.90 2.44
2702 3469 4.373527 ACCCGGCTTTGAATTAACAAAAC 58.626 39.130 0.00 0.00 38.90 2.43
2703 3470 3.743911 CCCGGCTTTGAATTAACAAAACC 59.256 43.478 0.00 0.00 40.47 3.27
2704 3471 4.372656 CCGGCTTTGAATTAACAAAACCA 58.627 39.130 10.82 0.00 42.56 3.67
2705 3472 4.994217 CCGGCTTTGAATTAACAAAACCAT 59.006 37.500 10.82 0.00 42.56 3.55
2706 3473 5.120053 CCGGCTTTGAATTAACAAAACCATC 59.880 40.000 10.82 0.00 42.56 3.51
2707 3474 5.694006 CGGCTTTGAATTAACAAAACCATCA 59.306 36.000 10.82 0.00 42.56 3.07
2708 3475 6.201806 CGGCTTTGAATTAACAAAACCATCAA 59.798 34.615 10.82 0.00 42.56 2.57
2709 3476 7.351981 GGCTTTGAATTAACAAAACCATCAAC 58.648 34.615 0.00 0.00 42.23 3.18
2710 3477 7.351981 GCTTTGAATTAACAAAACCATCAACC 58.648 34.615 0.00 0.00 38.90 3.77
2711 3478 7.470289 TTTGAATTAACAAAACCATCAACCG 57.530 32.000 0.00 0.00 36.92 4.44
2712 3479 5.533482 TGAATTAACAAAACCATCAACCGG 58.467 37.500 0.00 0.00 0.00 5.28
2713 3480 3.372660 TTAACAAAACCATCAACCGGC 57.627 42.857 0.00 0.00 0.00 6.13
2714 3481 0.391228 AACAAAACCATCAACCGGCC 59.609 50.000 0.00 0.00 0.00 6.13
2715 3482 0.757188 ACAAAACCATCAACCGGCCA 60.757 50.000 0.00 0.00 0.00 5.36
2716 3483 0.038343 CAAAACCATCAACCGGCCAG 60.038 55.000 0.00 0.00 0.00 4.85
2718 3485 2.075355 AAACCATCAACCGGCCAGGA 62.075 55.000 18.74 3.02 45.00 3.86
2719 3486 1.863155 AACCATCAACCGGCCAGGAT 61.863 55.000 18.74 5.67 45.00 3.24
2720 3487 1.076777 CCATCAACCGGCCAGGATT 60.077 57.895 18.74 7.79 45.00 3.01
2721 3488 0.182537 CCATCAACCGGCCAGGATTA 59.817 55.000 18.74 1.01 45.00 1.75
2722 3489 1.308998 CATCAACCGGCCAGGATTAC 58.691 55.000 18.74 0.00 45.00 1.89
2723 3490 0.916086 ATCAACCGGCCAGGATTACA 59.084 50.000 18.74 0.75 45.00 2.41
2724 3491 0.916086 TCAACCGGCCAGGATTACAT 59.084 50.000 18.74 0.00 45.00 2.29
2725 3492 1.024271 CAACCGGCCAGGATTACATG 58.976 55.000 18.74 0.00 45.00 3.21
2737 3504 6.064846 CAGGATTACATGGAAGCAACATAC 57.935 41.667 8.44 0.00 0.00 2.39
2738 3505 5.589855 CAGGATTACATGGAAGCAACATACA 59.410 40.000 8.44 0.00 0.00 2.29
2739 3506 6.263842 CAGGATTACATGGAAGCAACATACAT 59.736 38.462 8.44 0.00 0.00 2.29
2740 3507 6.488006 AGGATTACATGGAAGCAACATACATC 59.512 38.462 8.44 0.00 0.00 3.06
2741 3508 6.262944 GGATTACATGGAAGCAACATACATCA 59.737 38.462 8.44 0.00 0.00 3.07
2742 3509 7.201812 GGATTACATGGAAGCAACATACATCAA 60.202 37.037 8.44 0.00 0.00 2.57
2743 3510 7.643569 TTACATGGAAGCAACATACATCAAT 57.356 32.000 0.00 0.00 0.00 2.57
2744 3511 5.898174 ACATGGAAGCAACATACATCAATG 58.102 37.500 0.00 0.00 0.00 2.82
2745 3512 4.987408 TGGAAGCAACATACATCAATGG 57.013 40.909 0.00 0.00 0.00 3.16
2746 3513 4.598022 TGGAAGCAACATACATCAATGGA 58.402 39.130 0.00 0.00 0.00 3.41
2747 3514 4.641541 TGGAAGCAACATACATCAATGGAG 59.358 41.667 0.00 0.00 0.00 3.86
2748 3515 4.883585 GGAAGCAACATACATCAATGGAGA 59.116 41.667 0.00 0.00 0.00 3.71
2749 3516 5.357878 GGAAGCAACATACATCAATGGAGAA 59.642 40.000 0.00 0.00 0.00 2.87
2750 3517 6.127647 GGAAGCAACATACATCAATGGAGAAA 60.128 38.462 0.00 0.00 0.00 2.52
2751 3518 6.446781 AGCAACATACATCAATGGAGAAAG 57.553 37.500 0.00 0.00 0.00 2.62
2752 3519 5.039333 GCAACATACATCAATGGAGAAAGC 58.961 41.667 0.00 0.00 0.00 3.51
2753 3520 5.268544 CAACATACATCAATGGAGAAAGCG 58.731 41.667 0.00 0.00 0.00 4.68
2754 3521 3.879295 ACATACATCAATGGAGAAAGCGG 59.121 43.478 0.00 0.00 0.00 5.52
2755 3522 2.787473 ACATCAATGGAGAAAGCGGA 57.213 45.000 0.00 0.00 0.00 5.54
2756 3523 3.071874 ACATCAATGGAGAAAGCGGAA 57.928 42.857 0.00 0.00 0.00 4.30
2757 3524 3.420893 ACATCAATGGAGAAAGCGGAAA 58.579 40.909 0.00 0.00 0.00 3.13
2758 3525 3.826157 ACATCAATGGAGAAAGCGGAAAA 59.174 39.130 0.00 0.00 0.00 2.29
2759 3526 4.280677 ACATCAATGGAGAAAGCGGAAAAA 59.719 37.500 0.00 0.00 0.00 1.94
2760 3527 4.503741 TCAATGGAGAAAGCGGAAAAAG 57.496 40.909 0.00 0.00 0.00 2.27
2761 3528 3.255642 TCAATGGAGAAAGCGGAAAAAGG 59.744 43.478 0.00 0.00 0.00 3.11
2762 3529 1.616159 TGGAGAAAGCGGAAAAAGGG 58.384 50.000 0.00 0.00 0.00 3.95
2763 3530 1.144093 TGGAGAAAGCGGAAAAAGGGA 59.856 47.619 0.00 0.00 0.00 4.20
2764 3531 2.225017 TGGAGAAAGCGGAAAAAGGGAT 60.225 45.455 0.00 0.00 0.00 3.85
2765 3532 3.009695 TGGAGAAAGCGGAAAAAGGGATA 59.990 43.478 0.00 0.00 0.00 2.59
2766 3533 3.377485 GGAGAAAGCGGAAAAAGGGATAC 59.623 47.826 0.00 0.00 0.00 2.24
2767 3534 4.007659 GAGAAAGCGGAAAAAGGGATACA 58.992 43.478 0.00 0.00 39.74 2.29
2768 3535 4.403734 AGAAAGCGGAAAAAGGGATACAA 58.596 39.130 0.00 0.00 39.74 2.41
2769 3536 4.459337 AGAAAGCGGAAAAAGGGATACAAG 59.541 41.667 0.00 0.00 39.74 3.16
2770 3537 2.723273 AGCGGAAAAAGGGATACAAGG 58.277 47.619 0.00 0.00 39.74 3.61
2771 3538 2.041216 AGCGGAAAAAGGGATACAAGGT 59.959 45.455 0.00 0.00 39.74 3.50
2772 3539 2.163613 GCGGAAAAAGGGATACAAGGTG 59.836 50.000 0.00 0.00 39.74 4.00
2773 3540 2.163613 CGGAAAAAGGGATACAAGGTGC 59.836 50.000 0.00 0.00 39.74 5.01
2774 3541 3.161866 GGAAAAAGGGATACAAGGTGCA 58.838 45.455 0.00 0.00 39.74 4.57
2775 3542 3.576550 GGAAAAAGGGATACAAGGTGCAA 59.423 43.478 0.00 0.00 39.74 4.08
2776 3543 4.039852 GGAAAAAGGGATACAAGGTGCAAA 59.960 41.667 0.00 0.00 39.74 3.68
2777 3544 4.871933 AAAAGGGATACAAGGTGCAAAG 57.128 40.909 0.00 0.00 39.74 2.77
2778 3545 3.806949 AAGGGATACAAGGTGCAAAGA 57.193 42.857 0.00 0.00 39.74 2.52
2779 3546 3.356529 AGGGATACAAGGTGCAAAGAG 57.643 47.619 0.00 0.00 39.74 2.85
2780 3547 2.025887 AGGGATACAAGGTGCAAAGAGG 60.026 50.000 0.00 0.00 39.74 3.69
2781 3548 2.026262 GGGATACAAGGTGCAAAGAGGA 60.026 50.000 0.00 0.00 39.74 3.71
2782 3549 3.561313 GGGATACAAGGTGCAAAGAGGAA 60.561 47.826 0.00 0.00 39.74 3.36
2783 3550 3.440522 GGATACAAGGTGCAAAGAGGAAC 59.559 47.826 0.00 0.00 0.00 3.62
2784 3551 2.435372 ACAAGGTGCAAAGAGGAACA 57.565 45.000 0.00 0.00 0.00 3.18
2785 3552 2.733956 ACAAGGTGCAAAGAGGAACAA 58.266 42.857 0.00 0.00 0.00 2.83
2786 3553 3.299503 ACAAGGTGCAAAGAGGAACAAT 58.700 40.909 0.00 0.00 0.00 2.71
2787 3554 3.706086 ACAAGGTGCAAAGAGGAACAATT 59.294 39.130 0.00 0.00 0.00 2.32
2788 3555 4.202151 ACAAGGTGCAAAGAGGAACAATTC 60.202 41.667 0.00 0.00 0.00 2.17
2789 3556 3.837355 AGGTGCAAAGAGGAACAATTCT 58.163 40.909 0.00 0.00 0.00 2.40
2790 3557 4.985538 AGGTGCAAAGAGGAACAATTCTA 58.014 39.130 0.00 0.00 0.00 2.10
2791 3558 5.385198 AGGTGCAAAGAGGAACAATTCTAA 58.615 37.500 0.00 0.00 0.00 2.10
2792 3559 5.474876 AGGTGCAAAGAGGAACAATTCTAAG 59.525 40.000 0.00 0.00 0.00 2.18
2793 3560 5.335976 GGTGCAAAGAGGAACAATTCTAAGG 60.336 44.000 0.00 0.00 0.00 2.69
2794 3561 4.218417 TGCAAAGAGGAACAATTCTAAGGC 59.782 41.667 0.00 0.00 0.00 4.35
2795 3562 4.218417 GCAAAGAGGAACAATTCTAAGGCA 59.782 41.667 0.00 0.00 0.00 4.75
2796 3563 5.278957 GCAAAGAGGAACAATTCTAAGGCAA 60.279 40.000 0.00 0.00 0.00 4.52
2797 3564 5.966742 AAGAGGAACAATTCTAAGGCAAC 57.033 39.130 0.00 0.00 0.00 4.17
2798 3565 4.985538 AGAGGAACAATTCTAAGGCAACA 58.014 39.130 0.00 0.00 41.41 3.33
2799 3566 5.385198 AGAGGAACAATTCTAAGGCAACAA 58.615 37.500 0.00 0.00 41.41 2.83
2800 3567 5.241728 AGAGGAACAATTCTAAGGCAACAAC 59.758 40.000 0.00 0.00 41.41 3.32
2801 3568 4.280929 AGGAACAATTCTAAGGCAACAACC 59.719 41.667 0.00 0.00 41.41 3.77
2802 3569 4.038642 GGAACAATTCTAAGGCAACAACCA 59.961 41.667 0.00 0.00 41.41 3.67
2803 3570 4.853924 ACAATTCTAAGGCAACAACCAG 57.146 40.909 0.00 0.00 41.41 4.00
2804 3571 3.005791 ACAATTCTAAGGCAACAACCAGC 59.994 43.478 0.00 0.00 41.41 4.85
2805 3572 1.234821 TTCTAAGGCAACAACCAGCG 58.765 50.000 0.00 0.00 41.41 5.18
2806 3573 0.605319 TCTAAGGCAACAACCAGCGG 60.605 55.000 0.00 0.00 41.41 5.52
2807 3574 1.586154 CTAAGGCAACAACCAGCGGG 61.586 60.000 0.00 0.00 41.41 6.13
2810 3577 3.910490 GCAACAACCAGCGGGCAA 61.910 61.111 1.46 0.00 37.90 4.52
2811 3578 2.336088 CAACAACCAGCGGGCAAG 59.664 61.111 1.46 0.00 37.90 4.01
2812 3579 2.192861 CAACAACCAGCGGGCAAGA 61.193 57.895 1.46 0.00 37.90 3.02
2813 3580 1.454847 AACAACCAGCGGGCAAGAA 60.455 52.632 1.46 0.00 37.90 2.52
2814 3581 1.734388 AACAACCAGCGGGCAAGAAC 61.734 55.000 1.46 0.00 37.90 3.01
2815 3582 2.192861 CAACCAGCGGGCAAGAACA 61.193 57.895 1.46 0.00 37.90 3.18
2816 3583 2.193536 AACCAGCGGGCAAGAACAC 61.194 57.895 1.46 0.00 37.90 3.32
2817 3584 2.594303 CCAGCGGGCAAGAACACA 60.594 61.111 0.00 0.00 0.00 3.72
2818 3585 2.639286 CAGCGGGCAAGAACACAC 59.361 61.111 0.00 0.00 0.00 3.82
2819 3586 2.594592 AGCGGGCAAGAACACACC 60.595 61.111 0.00 0.00 0.00 4.16
2820 3587 2.904866 GCGGGCAAGAACACACCA 60.905 61.111 0.00 0.00 0.00 4.17
2821 3588 3.030652 CGGGCAAGAACACACCAC 58.969 61.111 0.00 0.00 0.00 4.16
2822 3589 2.892334 CGGGCAAGAACACACCACG 61.892 63.158 0.00 0.00 0.00 4.94
2823 3590 2.331451 GGCAAGAACACACCACGC 59.669 61.111 0.00 0.00 0.00 5.34
2824 3591 2.331451 GCAAGAACACACCACGCC 59.669 61.111 0.00 0.00 0.00 5.68
2825 3592 2.631428 CAAGAACACACCACGCCG 59.369 61.111 0.00 0.00 0.00 6.46
2826 3593 2.177580 CAAGAACACACCACGCCGT 61.178 57.895 0.00 0.00 0.00 5.68
2827 3594 1.885850 AAGAACACACCACGCCGTC 60.886 57.895 0.00 0.00 0.00 4.79
2947 3714 1.197721 CTCAAGTTGTTGCATCCGTCC 59.802 52.381 2.11 0.00 33.23 4.79
2992 3759 1.666888 CGAGCAACAAAACCTGGATGC 60.667 52.381 0.00 1.18 40.45 3.91
3023 3790 1.201414 TCAAGTCGCGAACTGAGCATA 59.799 47.619 12.06 0.00 38.58 3.14
3069 3836 3.225940 TGTGGTGAAATTGGTATGCACA 58.774 40.909 0.00 0.00 0.00 4.57
3070 3837 3.005261 TGTGGTGAAATTGGTATGCACAC 59.995 43.478 0.00 0.00 0.00 3.82
3071 3838 3.005261 GTGGTGAAATTGGTATGCACACA 59.995 43.478 0.00 0.00 0.00 3.72
3083 3862 2.284263 TGCACACAGAGATAGCTTCG 57.716 50.000 0.00 0.00 0.00 3.79
3131 3910 8.494016 ACTAAGTGAACTTATATGTCTTTGCC 57.506 34.615 3.47 0.00 37.75 4.52
3132 3911 8.322091 ACTAAGTGAACTTATATGTCTTTGCCT 58.678 33.333 3.47 0.00 37.75 4.75
3133 3912 9.167311 CTAAGTGAACTTATATGTCTTTGCCTT 57.833 33.333 3.47 0.00 37.75 4.35
3134 3913 7.617041 AGTGAACTTATATGTCTTTGCCTTC 57.383 36.000 0.00 0.00 0.00 3.46
3135 3914 7.168219 AGTGAACTTATATGTCTTTGCCTTCA 58.832 34.615 0.00 0.00 0.00 3.02
3136 3915 7.831193 AGTGAACTTATATGTCTTTGCCTTCAT 59.169 33.333 0.00 0.00 0.00 2.57
3137 3916 8.462016 GTGAACTTATATGTCTTTGCCTTCATT 58.538 33.333 0.00 0.00 0.00 2.57
3138 3917 8.677300 TGAACTTATATGTCTTTGCCTTCATTC 58.323 33.333 0.00 0.00 0.00 2.67
3139 3918 7.573968 ACTTATATGTCTTTGCCTTCATTCC 57.426 36.000 0.00 0.00 0.00 3.01
3140 3919 6.260936 ACTTATATGTCTTTGCCTTCATTCCG 59.739 38.462 0.00 0.00 0.00 4.30
3141 3920 2.559698 TGTCTTTGCCTTCATTCCGA 57.440 45.000 0.00 0.00 0.00 4.55
3142 3921 2.426522 TGTCTTTGCCTTCATTCCGAG 58.573 47.619 0.00 0.00 0.00 4.63
3143 3922 1.131315 GTCTTTGCCTTCATTCCGAGC 59.869 52.381 0.00 0.00 0.00 5.03
3144 3923 0.453390 CTTTGCCTTCATTCCGAGCC 59.547 55.000 0.00 0.00 0.00 4.70
3145 3924 0.251121 TTTGCCTTCATTCCGAGCCA 60.251 50.000 0.00 0.00 0.00 4.75
3146 3925 0.034186 TTGCCTTCATTCCGAGCCAT 60.034 50.000 0.00 0.00 0.00 4.40
3147 3926 0.836606 TGCCTTCATTCCGAGCCATA 59.163 50.000 0.00 0.00 0.00 2.74
3148 3927 1.421268 TGCCTTCATTCCGAGCCATAT 59.579 47.619 0.00 0.00 0.00 1.78
3149 3928 2.637382 TGCCTTCATTCCGAGCCATATA 59.363 45.455 0.00 0.00 0.00 0.86
3150 3929 3.072330 TGCCTTCATTCCGAGCCATATAA 59.928 43.478 0.00 0.00 0.00 0.98
3151 3930 4.072131 GCCTTCATTCCGAGCCATATAAA 58.928 43.478 0.00 0.00 0.00 1.40
3152 3931 4.518970 GCCTTCATTCCGAGCCATATAAAA 59.481 41.667 0.00 0.00 0.00 1.52
3153 3932 5.335191 GCCTTCATTCCGAGCCATATAAAAG 60.335 44.000 0.00 0.00 0.00 2.27
3154 3933 5.765182 CCTTCATTCCGAGCCATATAAAAGT 59.235 40.000 0.00 0.00 0.00 2.66
3155 3934 6.934645 CCTTCATTCCGAGCCATATAAAAGTA 59.065 38.462 0.00 0.00 0.00 2.24
3156 3935 7.444183 CCTTCATTCCGAGCCATATAAAAGTAA 59.556 37.037 0.00 0.00 0.00 2.24
3157 3936 8.740123 TTCATTCCGAGCCATATAAAAGTAAA 57.260 30.769 0.00 0.00 0.00 2.01
3158 3937 8.149973 TCATTCCGAGCCATATAAAAGTAAAC 57.850 34.615 0.00 0.00 0.00 2.01
3159 3938 7.990886 TCATTCCGAGCCATATAAAAGTAAACT 59.009 33.333 0.00 0.00 0.00 2.66
3160 3939 8.621286 CATTCCGAGCCATATAAAAGTAAACTT 58.379 33.333 0.00 0.00 37.91 2.66
3161 3940 7.781548 TCCGAGCCATATAAAAGTAAACTTC 57.218 36.000 0.00 0.00 34.61 3.01
3162 3941 6.764560 TCCGAGCCATATAAAAGTAAACTTCC 59.235 38.462 0.00 0.00 34.61 3.46
3163 3942 6.292703 CCGAGCCATATAAAAGTAAACTTCCG 60.293 42.308 0.00 0.00 34.61 4.30
3164 3943 6.257193 CGAGCCATATAAAAGTAAACTTCCGT 59.743 38.462 0.00 0.00 34.61 4.69
3165 3944 7.436080 CGAGCCATATAAAAGTAAACTTCCGTA 59.564 37.037 0.00 0.00 34.61 4.02
3166 3945 9.101655 GAGCCATATAAAAGTAAACTTCCGTAA 57.898 33.333 0.00 0.00 34.61 3.18
3167 3946 9.452287 AGCCATATAAAAGTAAACTTCCGTAAA 57.548 29.630 0.00 0.00 34.61 2.01
3187 3966 4.525912 AAAAATGGGTCTTAAGCTGCTG 57.474 40.909 1.35 0.00 0.00 4.41
3188 3967 3.439857 AAATGGGTCTTAAGCTGCTGA 57.560 42.857 1.35 0.00 0.00 4.26
3189 3968 3.439857 AATGGGTCTTAAGCTGCTGAA 57.560 42.857 1.35 0.00 0.00 3.02
3190 3969 2.479566 TGGGTCTTAAGCTGCTGAAG 57.520 50.000 18.98 18.98 0.00 3.02
3191 3970 1.977854 TGGGTCTTAAGCTGCTGAAGA 59.022 47.619 22.78 22.78 0.00 2.87
3192 3971 2.027745 TGGGTCTTAAGCTGCTGAAGAG 60.028 50.000 26.22 11.52 30.04 2.85
3193 3972 2.006169 GGTCTTAAGCTGCTGAAGAGC 58.994 52.381 32.05 32.05 46.44 4.09
3201 3980 4.709840 GCTGAAGAGCAGGCAGAA 57.290 55.556 0.00 0.00 45.46 3.02
3202 3981 2.938354 GCTGAAGAGCAGGCAGAAA 58.062 52.632 0.00 0.00 45.46 2.52
3203 3982 0.803740 GCTGAAGAGCAGGCAGAAAG 59.196 55.000 0.00 0.00 45.46 2.62
3204 3983 1.451067 CTGAAGAGCAGGCAGAAAGG 58.549 55.000 0.00 0.00 41.07 3.11
3205 3984 0.607489 TGAAGAGCAGGCAGAAAGGC 60.607 55.000 0.00 0.00 44.61 4.35
3222 4001 3.061848 CGCCCGGGCTGTTGAATT 61.062 61.111 41.01 0.00 39.32 2.17
3223 4002 2.635443 CGCCCGGGCTGTTGAATTT 61.635 57.895 41.01 0.00 39.32 1.82
3224 4003 1.079888 GCCCGGGCTGTTGAATTTG 60.080 57.895 38.76 0.00 38.26 2.32
3225 4004 1.531739 GCCCGGGCTGTTGAATTTGA 61.532 55.000 38.76 0.00 38.26 2.69
3226 4005 0.527565 CCCGGGCTGTTGAATTTGAG 59.472 55.000 8.08 0.00 0.00 3.02
3227 4006 1.533625 CCGGGCTGTTGAATTTGAGA 58.466 50.000 0.00 0.00 0.00 3.27
3228 4007 1.885887 CCGGGCTGTTGAATTTGAGAA 59.114 47.619 0.00 0.00 0.00 2.87
3229 4008 2.095059 CCGGGCTGTTGAATTTGAGAAG 60.095 50.000 0.00 0.00 0.00 2.85
3230 4009 2.669391 CGGGCTGTTGAATTTGAGAAGC 60.669 50.000 0.00 0.00 0.00 3.86
3231 4010 2.589014 GGCTGTTGAATTTGAGAAGCG 58.411 47.619 0.00 0.00 0.00 4.68
3232 4011 2.589014 GCTGTTGAATTTGAGAAGCGG 58.411 47.619 0.00 0.00 0.00 5.52
3233 4012 2.669391 GCTGTTGAATTTGAGAAGCGGG 60.669 50.000 0.00 0.00 0.00 6.13
3234 4013 2.554032 CTGTTGAATTTGAGAAGCGGGT 59.446 45.455 0.00 0.00 0.00 5.28
3235 4014 3.745799 TGTTGAATTTGAGAAGCGGGTA 58.254 40.909 0.00 0.00 0.00 3.69
3236 4015 4.331968 TGTTGAATTTGAGAAGCGGGTAT 58.668 39.130 0.00 0.00 0.00 2.73
3237 4016 4.155826 TGTTGAATTTGAGAAGCGGGTATG 59.844 41.667 0.00 0.00 0.00 2.39
3238 4017 3.278574 TGAATTTGAGAAGCGGGTATGG 58.721 45.455 0.00 0.00 0.00 2.74
3239 4018 3.054728 TGAATTTGAGAAGCGGGTATGGA 60.055 43.478 0.00 0.00 0.00 3.41
3240 4019 2.396590 TTTGAGAAGCGGGTATGGAC 57.603 50.000 0.00 0.00 0.00 4.02
3241 4020 0.174845 TTGAGAAGCGGGTATGGACG 59.825 55.000 0.00 0.00 0.00 4.79
3242 4021 0.681887 TGAGAAGCGGGTATGGACGA 60.682 55.000 0.00 0.00 0.00 4.20
3243 4022 0.674534 GAGAAGCGGGTATGGACGAT 59.325 55.000 0.00 0.00 0.00 3.73
3244 4023 1.884579 GAGAAGCGGGTATGGACGATA 59.115 52.381 0.00 0.00 0.00 2.92
3245 4024 2.295349 GAGAAGCGGGTATGGACGATAA 59.705 50.000 0.00 0.00 0.00 1.75
3246 4025 2.696707 AGAAGCGGGTATGGACGATAAA 59.303 45.455 0.00 0.00 0.00 1.40
3247 4026 3.133362 AGAAGCGGGTATGGACGATAAAA 59.867 43.478 0.00 0.00 0.00 1.52
3248 4027 3.107642 AGCGGGTATGGACGATAAAAG 57.892 47.619 0.00 0.00 0.00 2.27
3249 4028 2.140717 GCGGGTATGGACGATAAAAGG 58.859 52.381 0.00 0.00 0.00 3.11
3250 4029 2.484241 GCGGGTATGGACGATAAAAGGT 60.484 50.000 0.00 0.00 0.00 3.50
3251 4030 3.800531 CGGGTATGGACGATAAAAGGTT 58.199 45.455 0.00 0.00 0.00 3.50
3252 4031 4.740334 GCGGGTATGGACGATAAAAGGTTA 60.740 45.833 0.00 0.00 0.00 2.85
3253 4032 5.358922 CGGGTATGGACGATAAAAGGTTAA 58.641 41.667 0.00 0.00 0.00 2.01
3254 4033 5.816777 CGGGTATGGACGATAAAAGGTTAAA 59.183 40.000 0.00 0.00 0.00 1.52
3255 4034 6.315891 CGGGTATGGACGATAAAAGGTTAAAA 59.684 38.462 0.00 0.00 0.00 1.52
3256 4035 7.466320 CGGGTATGGACGATAAAAGGTTAAAAG 60.466 40.741 0.00 0.00 0.00 2.27
3257 4036 7.553760 GGGTATGGACGATAAAAGGTTAAAAGA 59.446 37.037 0.00 0.00 0.00 2.52
3258 4037 9.117183 GGTATGGACGATAAAAGGTTAAAAGAT 57.883 33.333 0.00 0.00 0.00 2.40
3262 4041 9.729281 TGGACGATAAAAGGTTAAAAGATTAGT 57.271 29.630 0.00 0.00 0.00 2.24
3269 4048 8.422577 AAAAGGTTAAAAGATTAGTCATGGCT 57.577 30.769 4.63 4.63 0.00 4.75
3270 4049 8.422577 AAAGGTTAAAAGATTAGTCATGGCTT 57.577 30.769 4.49 0.00 0.00 4.35
3271 4050 9.528489 AAAGGTTAAAAGATTAGTCATGGCTTA 57.472 29.630 4.49 0.00 0.00 3.09
3272 4051 8.507524 AGGTTAAAAGATTAGTCATGGCTTAC 57.492 34.615 4.49 0.00 0.00 2.34
3273 4052 7.556635 AGGTTAAAAGATTAGTCATGGCTTACC 59.443 37.037 4.49 0.00 0.00 2.85
3299 4078 7.793927 GCTATGAGCTTTTGGTTACTTATCT 57.206 36.000 0.00 0.00 38.45 1.98
3300 4079 8.214721 GCTATGAGCTTTTGGTTACTTATCTT 57.785 34.615 0.00 0.00 38.45 2.40
3301 4080 8.678199 GCTATGAGCTTTTGGTTACTTATCTTT 58.322 33.333 0.00 0.00 38.45 2.52
3302 4081 9.994432 CTATGAGCTTTTGGTTACTTATCTTTG 57.006 33.333 0.00 0.00 0.00 2.77
3303 4082 6.677913 TGAGCTTTTGGTTACTTATCTTTGC 58.322 36.000 0.00 0.00 0.00 3.68
3304 4083 6.490040 TGAGCTTTTGGTTACTTATCTTTGCT 59.510 34.615 0.00 0.00 0.00 3.91
3305 4084 7.663905 TGAGCTTTTGGTTACTTATCTTTGCTA 59.336 33.333 0.00 0.00 0.00 3.49
3306 4085 8.581253 AGCTTTTGGTTACTTATCTTTGCTAT 57.419 30.769 0.00 0.00 0.00 2.97
3307 4086 9.025041 AGCTTTTGGTTACTTATCTTTGCTATT 57.975 29.630 0.00 0.00 0.00 1.73
3308 4087 9.290483 GCTTTTGGTTACTTATCTTTGCTATTC 57.710 33.333 0.00 0.00 0.00 1.75
3311 4090 9.733556 TTTGGTTACTTATCTTTGCTATTCTGA 57.266 29.630 0.00 0.00 0.00 3.27
3312 4091 9.733556 TTGGTTACTTATCTTTGCTATTCTGAA 57.266 29.630 0.00 0.00 0.00 3.02
3313 4092 9.905713 TGGTTACTTATCTTTGCTATTCTGAAT 57.094 29.630 8.14 8.14 0.00 2.57
3318 4097 9.453572 ACTTATCTTTGCTATTCTGAATTGACA 57.546 29.630 14.55 9.47 0.00 3.58
3321 4100 8.976986 ATCTTTGCTATTCTGAATTGACAAAC 57.023 30.769 19.22 5.51 0.00 2.93
3322 4101 8.169977 TCTTTGCTATTCTGAATTGACAAACT 57.830 30.769 19.22 0.00 0.00 2.66
3323 4102 8.632679 TCTTTGCTATTCTGAATTGACAAACTT 58.367 29.630 19.22 0.00 0.00 2.66
3324 4103 9.897744 CTTTGCTATTCTGAATTGACAAACTTA 57.102 29.630 19.22 8.81 0.00 2.24
3325 4104 9.897744 TTTGCTATTCTGAATTGACAAACTTAG 57.102 29.630 19.22 7.33 0.00 2.18
3326 4105 8.621532 TGCTATTCTGAATTGACAAACTTAGT 57.378 30.769 14.55 0.00 0.00 2.24
3327 4106 9.719355 TGCTATTCTGAATTGACAAACTTAGTA 57.281 29.630 14.55 0.00 0.00 1.82
3331 4110 7.979444 TCTGAATTGACAAACTTAGTAAGGG 57.021 36.000 14.36 6.00 0.00 3.95
3332 4111 6.430000 TCTGAATTGACAAACTTAGTAAGGGC 59.570 38.462 14.36 0.00 0.00 5.19
3333 4112 6.065374 TGAATTGACAAACTTAGTAAGGGCA 58.935 36.000 14.36 2.20 0.00 5.36
3334 4113 6.719370 TGAATTGACAAACTTAGTAAGGGCAT 59.281 34.615 14.36 0.00 0.00 4.40
3335 4114 7.232534 TGAATTGACAAACTTAGTAAGGGCATT 59.767 33.333 14.36 0.00 0.00 3.56
3336 4115 6.969993 TTGACAAACTTAGTAAGGGCATTT 57.030 33.333 14.36 3.07 0.00 2.32
3337 4116 6.569179 TGACAAACTTAGTAAGGGCATTTC 57.431 37.500 14.36 3.85 0.00 2.17
3338 4117 6.303839 TGACAAACTTAGTAAGGGCATTTCT 58.696 36.000 14.36 0.00 0.00 2.52
3339 4118 7.455058 TGACAAACTTAGTAAGGGCATTTCTA 58.545 34.615 14.36 0.00 0.00 2.10
3340 4119 7.606456 TGACAAACTTAGTAAGGGCATTTCTAG 59.394 37.037 14.36 0.00 0.00 2.43
3341 4120 7.459234 ACAAACTTAGTAAGGGCATTTCTAGT 58.541 34.615 14.36 0.00 0.00 2.57
3342 4121 7.606839 ACAAACTTAGTAAGGGCATTTCTAGTC 59.393 37.037 14.36 0.00 0.00 2.59
3343 4122 5.903810 ACTTAGTAAGGGCATTTCTAGTCG 58.096 41.667 14.36 0.00 0.00 4.18
3344 4123 5.655532 ACTTAGTAAGGGCATTTCTAGTCGA 59.344 40.000 14.36 0.00 0.00 4.20
3345 4124 6.324254 ACTTAGTAAGGGCATTTCTAGTCGAT 59.676 38.462 14.36 0.00 0.00 3.59
3346 4125 5.203060 AGTAAGGGCATTTCTAGTCGATC 57.797 43.478 0.00 0.00 0.00 3.69
3347 4126 3.477210 AAGGGCATTTCTAGTCGATCC 57.523 47.619 0.00 0.00 0.00 3.36
3348 4127 1.694696 AGGGCATTTCTAGTCGATCCC 59.305 52.381 0.00 0.00 0.00 3.85
3349 4128 1.270893 GGGCATTTCTAGTCGATCCCC 60.271 57.143 0.00 0.00 0.00 4.81
3350 4129 1.416401 GGCATTTCTAGTCGATCCCCA 59.584 52.381 0.00 0.00 0.00 4.96
3351 4130 2.158813 GGCATTTCTAGTCGATCCCCAA 60.159 50.000 0.00 0.00 0.00 4.12
3352 4131 3.496870 GGCATTTCTAGTCGATCCCCAAT 60.497 47.826 0.00 0.00 0.00 3.16
3353 4132 4.262894 GGCATTTCTAGTCGATCCCCAATA 60.263 45.833 0.00 0.00 0.00 1.90
3354 4133 5.305585 GCATTTCTAGTCGATCCCCAATAA 58.694 41.667 0.00 0.00 0.00 1.40
3355 4134 5.179555 GCATTTCTAGTCGATCCCCAATAAC 59.820 44.000 0.00 0.00 0.00 1.89
3356 4135 4.950205 TTCTAGTCGATCCCCAATAACC 57.050 45.455 0.00 0.00 0.00 2.85
3357 4136 2.889045 TCTAGTCGATCCCCAATAACCG 59.111 50.000 0.00 0.00 0.00 4.44
3358 4137 0.756903 AGTCGATCCCCAATAACCGG 59.243 55.000 0.00 0.00 0.00 5.28
3359 4138 0.466963 GTCGATCCCCAATAACCGGT 59.533 55.000 0.00 0.00 0.00 5.28
3360 4139 1.134310 GTCGATCCCCAATAACCGGTT 60.134 52.381 25.64 25.64 0.00 4.44
3361 4140 2.102925 GTCGATCCCCAATAACCGGTTA 59.897 50.000 28.40 28.40 0.00 2.85
3362 4141 2.366266 TCGATCCCCAATAACCGGTTAG 59.634 50.000 29.49 17.98 0.00 2.34
3364 4143 1.215140 TCCCCAATAACCGGTTAGGG 58.785 55.000 31.56 31.56 46.96 3.53
3365 4144 1.215140 CCCCAATAACCGGTTAGGGA 58.785 55.000 36.51 19.11 46.96 4.20
3366 4145 1.134007 CCCCAATAACCGGTTAGGGAC 60.134 57.143 36.51 0.00 46.96 4.46
3367 4146 1.134007 CCCAATAACCGGTTAGGGACC 60.134 57.143 33.60 0.00 46.96 4.46
3368 4147 1.841919 CCAATAACCGGTTAGGGACCT 59.158 52.381 30.44 14.28 46.92 3.85
3369 4148 3.040477 CCAATAACCGGTTAGGGACCTA 58.960 50.000 30.44 12.33 46.92 3.08
3370 4149 3.070590 CCAATAACCGGTTAGGGACCTAG 59.929 52.174 30.44 15.69 46.92 3.02
3371 4150 1.780503 TAACCGGTTAGGGACCTAGC 58.219 55.000 23.17 3.86 46.92 3.42
3372 4151 0.979709 AACCGGTTAGGGACCTAGCC 60.980 60.000 20.78 18.31 46.92 3.93
3374 4153 4.692930 GGTTAGGGACCTAGCCGA 57.307 61.111 14.38 0.00 45.55 5.54
3375 4154 2.122527 GGTTAGGGACCTAGCCGAC 58.877 63.158 14.38 2.96 45.55 4.79
3376 4155 1.398174 GGTTAGGGACCTAGCCGACC 61.398 65.000 14.38 8.10 45.55 4.79
3377 4156 1.075748 TTAGGGACCTAGCCGACCC 60.076 63.158 0.00 0.00 42.36 4.46
3378 4157 2.594365 TTAGGGACCTAGCCGACCCC 62.594 65.000 0.00 0.00 42.97 4.95
3379 4158 4.791069 GGGACCTAGCCGACCCCA 62.791 72.222 0.00 0.00 37.04 4.96
3380 4159 2.686106 GGACCTAGCCGACCCCAA 60.686 66.667 0.00 0.00 0.00 4.12
3381 4160 2.070650 GGACCTAGCCGACCCCAAT 61.071 63.158 0.00 0.00 0.00 3.16
3382 4161 1.446366 GACCTAGCCGACCCCAATC 59.554 63.158 0.00 0.00 0.00 2.67
3383 4162 2.365095 GACCTAGCCGACCCCAATCG 62.365 65.000 0.00 0.00 41.89 3.34
3392 4171 2.616489 ACCCCAATCGGTCTTAGGG 58.384 57.895 0.00 0.00 40.58 3.53
3394 4173 2.925078 CCCAATCGGTCTTAGGGGA 58.075 57.895 0.00 0.00 37.80 4.81
3395 4174 0.759346 CCCAATCGGTCTTAGGGGAG 59.241 60.000 0.00 0.00 37.80 4.30
3396 4175 1.497161 CCAATCGGTCTTAGGGGAGT 58.503 55.000 0.00 0.00 0.00 3.85
3397 4176 2.674420 CCAATCGGTCTTAGGGGAGTA 58.326 52.381 0.00 0.00 0.00 2.59
3398 4177 3.036091 CCAATCGGTCTTAGGGGAGTAA 58.964 50.000 0.00 0.00 0.00 2.24
3399 4178 3.453353 CCAATCGGTCTTAGGGGAGTAAA 59.547 47.826 0.00 0.00 0.00 2.01
3400 4179 4.080751 CCAATCGGTCTTAGGGGAGTAAAA 60.081 45.833 0.00 0.00 0.00 1.52
3401 4180 5.493809 CAATCGGTCTTAGGGGAGTAAAAA 58.506 41.667 0.00 0.00 0.00 1.94
3402 4181 5.970501 ATCGGTCTTAGGGGAGTAAAAAT 57.029 39.130 0.00 0.00 0.00 1.82
3403 4182 5.767277 TCGGTCTTAGGGGAGTAAAAATT 57.233 39.130 0.00 0.00 0.00 1.82
3404 4183 6.872585 TCGGTCTTAGGGGAGTAAAAATTA 57.127 37.500 0.00 0.00 0.00 1.40
3405 4184 6.643388 TCGGTCTTAGGGGAGTAAAAATTAC 58.357 40.000 0.00 0.00 0.00 1.89
3406 4185 5.819379 CGGTCTTAGGGGAGTAAAAATTACC 59.181 44.000 0.00 0.00 0.00 2.85
3407 4186 6.125029 GGTCTTAGGGGAGTAAAAATTACCC 58.875 44.000 0.00 0.00 39.79 3.69
3409 4188 7.408543 GTCTTAGGGGAGTAAAAATTACCCTT 58.591 38.462 5.27 0.00 45.95 3.95
3410 4189 8.551440 GTCTTAGGGGAGTAAAAATTACCCTTA 58.449 37.037 5.27 0.00 45.95 2.69
3411 4190 9.300187 TCTTAGGGGAGTAAAAATTACCCTTAT 57.700 33.333 5.27 0.00 45.95 1.73
3412 4191 9.570468 CTTAGGGGAGTAAAAATTACCCTTATC 57.430 37.037 5.27 0.00 45.95 1.75
3413 4192 6.919158 AGGGGAGTAAAAATTACCCTTATCC 58.081 40.000 0.00 0.00 45.95 2.59
3414 4193 5.766670 GGGGAGTAAAAATTACCCTTATCCG 59.233 44.000 0.00 0.00 40.31 4.18
3415 4194 6.359804 GGGAGTAAAAATTACCCTTATCCGT 58.640 40.000 0.00 0.00 37.75 4.69
3416 4195 6.484643 GGGAGTAAAAATTACCCTTATCCGTC 59.515 42.308 0.00 0.00 37.75 4.79
3417 4196 6.201615 GGAGTAAAAATTACCCTTATCCGTCG 59.798 42.308 0.00 0.00 0.00 5.12
3418 4197 4.888038 AAAAATTACCCTTATCCGTCGC 57.112 40.909 0.00 0.00 0.00 5.19
3419 4198 2.144482 AATTACCCTTATCCGTCGCG 57.856 50.000 0.00 0.00 0.00 5.87
3429 4208 2.879907 CCGTCGCGGTTCTCCTTA 59.120 61.111 6.13 0.00 42.73 2.69
3430 4209 1.436336 CCGTCGCGGTTCTCCTTAT 59.564 57.895 6.13 0.00 42.73 1.73
3431 4210 0.664761 CCGTCGCGGTTCTCCTTATA 59.335 55.000 6.13 0.00 42.73 0.98
3432 4211 1.268899 CCGTCGCGGTTCTCCTTATAT 59.731 52.381 6.13 0.00 42.73 0.86
3433 4212 2.288030 CCGTCGCGGTTCTCCTTATATT 60.288 50.000 6.13 0.00 42.73 1.28
3434 4213 3.378339 CGTCGCGGTTCTCCTTATATTT 58.622 45.455 6.13 0.00 0.00 1.40
3435 4214 4.539870 CGTCGCGGTTCTCCTTATATTTA 58.460 43.478 6.13 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 2.609459 CGTAGCAAAGGCCATCAACTAG 59.391 50.000 5.01 0.00 42.56 2.57
79 80 4.899502 CCATTCATGGTCTACTATCCACC 58.100 47.826 0.00 0.00 43.05 4.61
191 193 8.845413 TTTCTCCCAAAATTAAATGACAATGG 57.155 30.769 0.00 0.00 0.00 3.16
203 205 8.869109 TGACAACATAGAATTTCTCCCAAAATT 58.131 29.630 1.27 0.00 40.60 1.82
279 281 4.067896 AGCGGGACTATATGCATCAAAAG 58.932 43.478 0.19 0.00 0.00 2.27
465 484 5.105752 TGCACACTTTGACCAAATTTGTAC 58.894 37.500 16.73 10.41 30.13 2.90
551 613 5.699001 TCATTCTAGTGAGCGCAACTAAAAA 59.301 36.000 19.57 16.81 0.00 1.94
571 633 9.331282 GATGCTACTAAGTGTCCTAAAATCATT 57.669 33.333 0.00 0.00 0.00 2.57
616 680 0.106708 TCCCCATTCTATGCTGCGAC 59.893 55.000 0.00 0.00 0.00 5.19
618 682 0.179048 TGTCCCCATTCTATGCTGCG 60.179 55.000 0.00 0.00 0.00 5.18
642 706 6.009589 TCAACCATATGGCTGTAATAATGGG 58.990 40.000 22.18 0.00 39.32 4.00
733 1402 1.001487 TGCATGTCGAGCCAACAAAAG 60.001 47.619 0.00 0.00 0.00 2.27
908 1630 2.117941 GAGTGGCGTGGAGTTGCAAC 62.118 60.000 22.17 22.17 35.19 4.17
972 1694 6.486056 TGGATCTCTGACTAGTACTTGAGTT 58.514 40.000 11.43 2.99 0.00 3.01
982 1704 3.577415 TGCATGGATGGATCTCTGACTAG 59.423 47.826 0.00 0.00 0.00 2.57
1074 1796 2.119801 AGAATGATTTCTGCGGCTGT 57.880 45.000 0.00 0.00 40.74 4.40
1113 1835 3.201290 GCCATCATTGTCGATCAGAAGT 58.799 45.455 0.00 0.00 0.00 3.01
1164 1898 2.693762 CCCGTCGGAGTAGTCGCAA 61.694 63.158 14.39 0.00 0.00 4.85
1176 1910 1.024579 CCTTCACCCATTTCCCGTCG 61.025 60.000 0.00 0.00 0.00 5.12
1224 1961 1.668101 GATCGAGGAACGGGCAGTCT 61.668 60.000 0.00 0.00 42.82 3.24
1326 2066 1.315690 CGATGGCTACCTACTTCGGA 58.684 55.000 0.00 0.00 32.64 4.55
1329 2069 0.750850 TGGCGATGGCTACCTACTTC 59.249 55.000 0.00 0.00 39.81 3.01
1682 2435 0.461135 CACCTTTGTTGCTTGCCACT 59.539 50.000 0.00 0.00 0.00 4.00
1707 2460 2.515901 GATGGCGCCCCTGGTAAT 59.484 61.111 26.77 8.72 0.00 1.89
1781 2534 1.961277 CCAGTGACCCGTGTTGAGC 60.961 63.158 0.00 0.00 0.00 4.26
1918 2675 5.893255 CCCACCATGAAATAATTTCCTCTGA 59.107 40.000 0.00 0.00 38.90 3.27
2021 2778 0.536687 TCGTGGAGAGTCGTGGACTT 60.537 55.000 0.00 0.00 43.53 3.01
2023 2780 1.502640 CTCGTGGAGAGTCGTGGAC 59.497 63.158 0.00 0.00 41.99 4.02
2136 2893 0.459237 CTCTCGCCAGTGGTCATCAC 60.459 60.000 11.74 0.00 46.39 3.06
2204 2964 0.949397 TCTGTTGTCTACTCGTGCGT 59.051 50.000 0.00 0.00 0.00 5.24
2205 2965 1.914051 CATCTGTTGTCTACTCGTGCG 59.086 52.381 0.00 0.00 0.00 5.34
2219 2982 3.330701 ACACCACCCTATTGTTCATCTGT 59.669 43.478 0.00 0.00 0.00 3.41
2432 3195 1.791785 GCGAGATGAGCTGCTGATTAC 59.208 52.381 7.01 1.66 0.00 1.89
2473 3237 0.935196 GTGGGTGTGAAGTTCGTGTC 59.065 55.000 0.00 0.00 0.00 3.67
2541 3305 0.538584 TACACCATGCTCCTGCTCTG 59.461 55.000 0.00 0.00 40.48 3.35
2542 3306 1.415659 GATACACCATGCTCCTGCTCT 59.584 52.381 0.00 0.00 40.48 4.09
2587 3354 0.667487 ATGTGCCAGAGTCGAACACG 60.667 55.000 0.00 0.00 33.96 4.49
2593 3360 1.338337 CCTACCTATGTGCCAGAGTCG 59.662 57.143 0.00 0.00 0.00 4.18
2614 3381 1.910580 AATACACCGGGGTCCTGCTG 61.911 60.000 15.89 0.00 0.00 4.41
2615 3382 1.205460 AAATACACCGGGGTCCTGCT 61.205 55.000 15.89 0.00 0.00 4.24
2616 3383 0.323087 AAAATACACCGGGGTCCTGC 60.323 55.000 15.89 0.00 0.00 4.85
2617 3384 2.209690 AAAAATACACCGGGGTCCTG 57.790 50.000 15.89 0.00 0.00 3.86
2635 3402 1.890489 GGCCGGCCTTTTCTCTAAAAA 59.110 47.619 38.76 0.00 34.26 1.94
2636 3403 1.541379 GGCCGGCCTTTTCTCTAAAA 58.459 50.000 38.76 0.00 33.58 1.52
2637 3404 0.675522 CGGCCGGCCTTTTCTCTAAA 60.676 55.000 41.01 0.00 0.00 1.85
2638 3405 1.078708 CGGCCGGCCTTTTCTCTAA 60.079 57.895 41.01 0.00 0.00 2.10
2639 3406 1.956629 CTCGGCCGGCCTTTTCTCTA 61.957 60.000 41.01 15.68 0.00 2.43
2640 3407 3.316573 CTCGGCCGGCCTTTTCTCT 62.317 63.158 41.01 0.00 0.00 3.10
2641 3408 2.820037 CTCGGCCGGCCTTTTCTC 60.820 66.667 41.01 15.33 0.00 2.87
2653 3420 4.882396 GCTCTTCTCGGGCTCGGC 62.882 72.222 5.94 0.00 36.95 5.54
2654 3421 3.132481 GAGCTCTTCTCGGGCTCGG 62.132 68.421 5.94 0.00 42.03 4.63
2655 3422 2.411290 GAGCTCTTCTCGGGCTCG 59.589 66.667 6.43 0.00 42.03 5.03
2657 3424 0.036858 GTTTGAGCTCTTCTCGGGCT 60.037 55.000 16.19 0.00 44.86 5.19
2658 3425 1.021920 GGTTTGAGCTCTTCTCGGGC 61.022 60.000 16.19 0.00 44.86 6.13
2659 3426 0.610687 AGGTTTGAGCTCTTCTCGGG 59.389 55.000 16.19 0.00 44.86 5.14
2660 3427 3.254892 GTTAGGTTTGAGCTCTTCTCGG 58.745 50.000 16.19 0.00 44.86 4.63
2661 3428 3.254892 GGTTAGGTTTGAGCTCTTCTCG 58.745 50.000 16.19 0.00 44.86 4.04
2662 3429 3.601435 GGGTTAGGTTTGAGCTCTTCTC 58.399 50.000 16.19 2.57 42.23 2.87
2663 3430 2.028020 CGGGTTAGGTTTGAGCTCTTCT 60.028 50.000 16.19 9.23 0.00 2.85
2664 3431 2.347731 CGGGTTAGGTTTGAGCTCTTC 58.652 52.381 16.19 5.13 0.00 2.87
2665 3432 1.003233 CCGGGTTAGGTTTGAGCTCTT 59.997 52.381 16.19 0.00 0.00 2.85
2666 3433 0.613777 CCGGGTTAGGTTTGAGCTCT 59.386 55.000 16.19 0.00 0.00 4.09
2667 3434 1.025113 GCCGGGTTAGGTTTGAGCTC 61.025 60.000 6.82 6.82 0.00 4.09
2668 3435 1.002502 GCCGGGTTAGGTTTGAGCT 60.003 57.895 2.18 0.00 0.00 4.09
2669 3436 0.608308 AAGCCGGGTTAGGTTTGAGC 60.608 55.000 19.23 0.00 33.35 4.26
2670 3437 1.539827 CAAAGCCGGGTTAGGTTTGAG 59.460 52.381 21.08 0.00 35.89 3.02
2671 3438 1.143277 TCAAAGCCGGGTTAGGTTTGA 59.857 47.619 21.08 16.11 38.12 2.69
2672 3439 1.611519 TCAAAGCCGGGTTAGGTTTG 58.388 50.000 21.08 13.88 34.87 2.93
2673 3440 2.368311 TTCAAAGCCGGGTTAGGTTT 57.632 45.000 21.08 0.00 36.22 3.27
2674 3441 2.597578 ATTCAAAGCCGGGTTAGGTT 57.402 45.000 21.08 0.00 0.00 3.50
2675 3442 2.597578 AATTCAAAGCCGGGTTAGGT 57.402 45.000 21.08 0.25 0.00 3.08
2676 3443 3.759618 TGTTAATTCAAAGCCGGGTTAGG 59.240 43.478 21.08 15.10 0.00 2.69
2677 3444 5.379732 TTGTTAATTCAAAGCCGGGTTAG 57.620 39.130 21.08 0.02 0.00 2.34
2678 3445 5.786264 TTTGTTAATTCAAAGCCGGGTTA 57.214 34.783 21.08 4.25 34.02 2.85
2679 3446 4.674281 TTTGTTAATTCAAAGCCGGGTT 57.326 36.364 14.44 14.44 34.02 4.11
2680 3447 4.373527 GTTTTGTTAATTCAAAGCCGGGT 58.626 39.130 0.00 0.00 38.32 5.28
2681 3448 3.743911 GGTTTTGTTAATTCAAAGCCGGG 59.256 43.478 2.18 0.00 44.19 5.73
2682 3449 4.983215 GGTTTTGTTAATTCAAAGCCGG 57.017 40.909 8.93 0.00 44.19 6.13
2685 3452 7.351981 GGTTGATGGTTTTGTTAATTCAAAGC 58.648 34.615 0.00 0.00 38.32 3.51
2686 3453 7.307101 CCGGTTGATGGTTTTGTTAATTCAAAG 60.307 37.037 0.00 0.00 38.32 2.77
2687 3454 6.480320 CCGGTTGATGGTTTTGTTAATTCAAA 59.520 34.615 0.00 0.00 35.83 2.69
2688 3455 5.986135 CCGGTTGATGGTTTTGTTAATTCAA 59.014 36.000 0.00 0.00 0.00 2.69
2689 3456 5.533482 CCGGTTGATGGTTTTGTTAATTCA 58.467 37.500 0.00 0.00 0.00 2.57
2690 3457 4.387559 GCCGGTTGATGGTTTTGTTAATTC 59.612 41.667 1.90 0.00 0.00 2.17
2691 3458 4.311606 GCCGGTTGATGGTTTTGTTAATT 58.688 39.130 1.90 0.00 0.00 1.40
2692 3459 3.306433 GGCCGGTTGATGGTTTTGTTAAT 60.306 43.478 1.90 0.00 0.00 1.40
2693 3460 2.036089 GGCCGGTTGATGGTTTTGTTAA 59.964 45.455 1.90 0.00 0.00 2.01
2694 3461 1.614413 GGCCGGTTGATGGTTTTGTTA 59.386 47.619 1.90 0.00 0.00 2.41
2695 3462 0.391228 GGCCGGTTGATGGTTTTGTT 59.609 50.000 1.90 0.00 0.00 2.83
2696 3463 0.757188 TGGCCGGTTGATGGTTTTGT 60.757 50.000 1.90 0.00 0.00 2.83
2697 3464 0.038343 CTGGCCGGTTGATGGTTTTG 60.038 55.000 2.29 0.00 0.00 2.44
2698 3465 1.184970 CCTGGCCGGTTGATGGTTTT 61.185 55.000 11.58 0.00 0.00 2.43
2699 3466 1.606313 CCTGGCCGGTTGATGGTTT 60.606 57.895 11.58 0.00 0.00 3.27
2700 3467 1.863155 ATCCTGGCCGGTTGATGGTT 61.863 55.000 11.58 0.00 0.00 3.67
2701 3468 1.863155 AATCCTGGCCGGTTGATGGT 61.863 55.000 11.58 0.00 0.00 3.55
2702 3469 0.182537 TAATCCTGGCCGGTTGATGG 59.817 55.000 11.58 0.00 0.00 3.51
2703 3470 1.308998 GTAATCCTGGCCGGTTGATG 58.691 55.000 11.58 0.00 0.00 3.07
2704 3471 0.916086 TGTAATCCTGGCCGGTTGAT 59.084 50.000 11.58 4.00 0.00 2.57
2705 3472 0.916086 ATGTAATCCTGGCCGGTTGA 59.084 50.000 11.58 1.27 0.00 3.18
2706 3473 1.024271 CATGTAATCCTGGCCGGTTG 58.976 55.000 11.58 0.00 0.00 3.77
2707 3474 0.106719 CCATGTAATCCTGGCCGGTT 60.107 55.000 11.58 1.23 0.00 4.44
2708 3475 0.986019 TCCATGTAATCCTGGCCGGT 60.986 55.000 11.58 0.00 32.30 5.28
2709 3476 0.182537 TTCCATGTAATCCTGGCCGG 59.817 55.000 3.88 3.88 32.30 6.13
2710 3477 1.597742 CTTCCATGTAATCCTGGCCG 58.402 55.000 0.00 0.00 32.30 6.13
2711 3478 1.322442 GCTTCCATGTAATCCTGGCC 58.678 55.000 0.00 0.00 32.30 5.36
2712 3479 2.057137 TGCTTCCATGTAATCCTGGC 57.943 50.000 0.00 0.00 32.30 4.85
2713 3480 3.355378 TGTTGCTTCCATGTAATCCTGG 58.645 45.455 0.00 0.00 0.00 4.45
2714 3481 5.589855 TGTATGTTGCTTCCATGTAATCCTG 59.410 40.000 0.00 0.00 0.00 3.86
2715 3482 5.754782 TGTATGTTGCTTCCATGTAATCCT 58.245 37.500 0.00 0.00 0.00 3.24
2716 3483 6.262944 TGATGTATGTTGCTTCCATGTAATCC 59.737 38.462 0.00 0.00 0.00 3.01
2717 3484 7.263100 TGATGTATGTTGCTTCCATGTAATC 57.737 36.000 0.00 0.00 0.00 1.75
2718 3485 7.643569 TTGATGTATGTTGCTTCCATGTAAT 57.356 32.000 0.00 0.00 0.00 1.89
2719 3486 7.416551 CCATTGATGTATGTTGCTTCCATGTAA 60.417 37.037 0.00 0.00 0.00 2.41
2720 3487 6.039605 CCATTGATGTATGTTGCTTCCATGTA 59.960 38.462 0.00 0.00 0.00 2.29
2721 3488 5.163488 CCATTGATGTATGTTGCTTCCATGT 60.163 40.000 0.00 0.00 0.00 3.21
2722 3489 5.068067 TCCATTGATGTATGTTGCTTCCATG 59.932 40.000 0.00 0.00 0.00 3.66
2723 3490 5.202765 TCCATTGATGTATGTTGCTTCCAT 58.797 37.500 0.00 0.00 0.00 3.41
2724 3491 4.598022 TCCATTGATGTATGTTGCTTCCA 58.402 39.130 0.00 0.00 0.00 3.53
2725 3492 4.883585 TCTCCATTGATGTATGTTGCTTCC 59.116 41.667 0.00 0.00 0.00 3.46
2726 3493 6.441093 TTCTCCATTGATGTATGTTGCTTC 57.559 37.500 0.00 0.00 0.00 3.86
2727 3494 6.626623 GCTTTCTCCATTGATGTATGTTGCTT 60.627 38.462 0.00 0.00 0.00 3.91
2728 3495 5.163581 GCTTTCTCCATTGATGTATGTTGCT 60.164 40.000 0.00 0.00 0.00 3.91
2729 3496 5.039333 GCTTTCTCCATTGATGTATGTTGC 58.961 41.667 0.00 0.00 0.00 4.17
2730 3497 5.268544 CGCTTTCTCCATTGATGTATGTTG 58.731 41.667 0.00 0.00 0.00 3.33
2731 3498 4.336433 CCGCTTTCTCCATTGATGTATGTT 59.664 41.667 0.00 0.00 0.00 2.71
2732 3499 3.879295 CCGCTTTCTCCATTGATGTATGT 59.121 43.478 0.00 0.00 0.00 2.29
2733 3500 4.129380 TCCGCTTTCTCCATTGATGTATG 58.871 43.478 0.00 0.00 0.00 2.39
2734 3501 4.422073 TCCGCTTTCTCCATTGATGTAT 57.578 40.909 0.00 0.00 0.00 2.29
2735 3502 3.904800 TCCGCTTTCTCCATTGATGTA 57.095 42.857 0.00 0.00 0.00 2.29
2736 3503 2.787473 TCCGCTTTCTCCATTGATGT 57.213 45.000 0.00 0.00 0.00 3.06
2737 3504 4.439305 TTTTCCGCTTTCTCCATTGATG 57.561 40.909 0.00 0.00 0.00 3.07
2738 3505 4.082026 CCTTTTTCCGCTTTCTCCATTGAT 60.082 41.667 0.00 0.00 0.00 2.57
2739 3506 3.255642 CCTTTTTCCGCTTTCTCCATTGA 59.744 43.478 0.00 0.00 0.00 2.57
2740 3507 3.578688 CCTTTTTCCGCTTTCTCCATTG 58.421 45.455 0.00 0.00 0.00 2.82
2741 3508 2.562738 CCCTTTTTCCGCTTTCTCCATT 59.437 45.455 0.00 0.00 0.00 3.16
2742 3509 2.171003 CCCTTTTTCCGCTTTCTCCAT 58.829 47.619 0.00 0.00 0.00 3.41
2743 3510 1.144093 TCCCTTTTTCCGCTTTCTCCA 59.856 47.619 0.00 0.00 0.00 3.86
2744 3511 1.905637 TCCCTTTTTCCGCTTTCTCC 58.094 50.000 0.00 0.00 0.00 3.71
2745 3512 4.007659 TGTATCCCTTTTTCCGCTTTCTC 58.992 43.478 0.00 0.00 0.00 2.87
2746 3513 4.028993 TGTATCCCTTTTTCCGCTTTCT 57.971 40.909 0.00 0.00 0.00 2.52
2747 3514 4.380550 CCTTGTATCCCTTTTTCCGCTTTC 60.381 45.833 0.00 0.00 0.00 2.62
2748 3515 3.509967 CCTTGTATCCCTTTTTCCGCTTT 59.490 43.478 0.00 0.00 0.00 3.51
2749 3516 3.089284 CCTTGTATCCCTTTTTCCGCTT 58.911 45.455 0.00 0.00 0.00 4.68
2750 3517 2.041216 ACCTTGTATCCCTTTTTCCGCT 59.959 45.455 0.00 0.00 0.00 5.52
2751 3518 2.163613 CACCTTGTATCCCTTTTTCCGC 59.836 50.000 0.00 0.00 0.00 5.54
2752 3519 2.163613 GCACCTTGTATCCCTTTTTCCG 59.836 50.000 0.00 0.00 0.00 4.30
2753 3520 3.161866 TGCACCTTGTATCCCTTTTTCC 58.838 45.455 0.00 0.00 0.00 3.13
2754 3521 4.864704 TTGCACCTTGTATCCCTTTTTC 57.135 40.909 0.00 0.00 0.00 2.29
2755 3522 4.898861 TCTTTGCACCTTGTATCCCTTTTT 59.101 37.500 0.00 0.00 0.00 1.94
2756 3523 4.479158 TCTTTGCACCTTGTATCCCTTTT 58.521 39.130 0.00 0.00 0.00 2.27
2757 3524 4.082125 CTCTTTGCACCTTGTATCCCTTT 58.918 43.478 0.00 0.00 0.00 3.11
2758 3525 3.562176 CCTCTTTGCACCTTGTATCCCTT 60.562 47.826 0.00 0.00 0.00 3.95
2759 3526 2.025887 CCTCTTTGCACCTTGTATCCCT 60.026 50.000 0.00 0.00 0.00 4.20
2760 3527 2.026262 TCCTCTTTGCACCTTGTATCCC 60.026 50.000 0.00 0.00 0.00 3.85
2761 3528 3.350219 TCCTCTTTGCACCTTGTATCC 57.650 47.619 0.00 0.00 0.00 2.59
2762 3529 4.072131 TGTTCCTCTTTGCACCTTGTATC 58.928 43.478 0.00 0.00 0.00 2.24
2763 3530 4.098914 TGTTCCTCTTTGCACCTTGTAT 57.901 40.909 0.00 0.00 0.00 2.29
2764 3531 3.569194 TGTTCCTCTTTGCACCTTGTA 57.431 42.857 0.00 0.00 0.00 2.41
2765 3532 2.435372 TGTTCCTCTTTGCACCTTGT 57.565 45.000 0.00 0.00 0.00 3.16
2766 3533 4.038402 AGAATTGTTCCTCTTTGCACCTTG 59.962 41.667 0.00 0.00 0.00 3.61
2767 3534 4.218312 AGAATTGTTCCTCTTTGCACCTT 58.782 39.130 0.00 0.00 0.00 3.50
2768 3535 3.837355 AGAATTGTTCCTCTTTGCACCT 58.163 40.909 0.00 0.00 0.00 4.00
2769 3536 5.335976 CCTTAGAATTGTTCCTCTTTGCACC 60.336 44.000 0.00 0.00 0.00 5.01
2770 3537 5.703876 CCTTAGAATTGTTCCTCTTTGCAC 58.296 41.667 0.00 0.00 0.00 4.57
2771 3538 4.218417 GCCTTAGAATTGTTCCTCTTTGCA 59.782 41.667 0.00 0.00 0.00 4.08
2772 3539 4.218417 TGCCTTAGAATTGTTCCTCTTTGC 59.782 41.667 0.00 0.00 0.00 3.68
2773 3540 5.964958 TGCCTTAGAATTGTTCCTCTTTG 57.035 39.130 0.00 0.00 0.00 2.77
2774 3541 5.833131 TGTTGCCTTAGAATTGTTCCTCTTT 59.167 36.000 0.00 0.00 0.00 2.52
2775 3542 5.385198 TGTTGCCTTAGAATTGTTCCTCTT 58.615 37.500 0.00 0.00 0.00 2.85
2776 3543 4.985538 TGTTGCCTTAGAATTGTTCCTCT 58.014 39.130 0.00 0.00 0.00 3.69
2777 3544 5.461526 GTTGTTGCCTTAGAATTGTTCCTC 58.538 41.667 0.00 0.00 0.00 3.71
2778 3545 4.280929 GGTTGTTGCCTTAGAATTGTTCCT 59.719 41.667 0.00 0.00 0.00 3.36
2779 3546 4.038642 TGGTTGTTGCCTTAGAATTGTTCC 59.961 41.667 0.00 0.00 0.00 3.62
2780 3547 5.195001 TGGTTGTTGCCTTAGAATTGTTC 57.805 39.130 0.00 0.00 0.00 3.18
2781 3548 4.501400 GCTGGTTGTTGCCTTAGAATTGTT 60.501 41.667 0.00 0.00 0.00 2.83
2782 3549 3.005791 GCTGGTTGTTGCCTTAGAATTGT 59.994 43.478 0.00 0.00 0.00 2.71
2783 3550 3.578688 GCTGGTTGTTGCCTTAGAATTG 58.421 45.455 0.00 0.00 0.00 2.32
2784 3551 2.228822 CGCTGGTTGTTGCCTTAGAATT 59.771 45.455 0.00 0.00 0.00 2.17
2785 3552 1.812571 CGCTGGTTGTTGCCTTAGAAT 59.187 47.619 0.00 0.00 0.00 2.40
2786 3553 1.234821 CGCTGGTTGTTGCCTTAGAA 58.765 50.000 0.00 0.00 0.00 2.10
2787 3554 0.605319 CCGCTGGTTGTTGCCTTAGA 60.605 55.000 0.00 0.00 0.00 2.10
2788 3555 1.586154 CCCGCTGGTTGTTGCCTTAG 61.586 60.000 0.00 0.00 0.00 2.18
2789 3556 1.602323 CCCGCTGGTTGTTGCCTTA 60.602 57.895 0.00 0.00 0.00 2.69
2790 3557 2.912025 CCCGCTGGTTGTTGCCTT 60.912 61.111 0.00 0.00 0.00 4.35
2793 3560 3.846602 CTTGCCCGCTGGTTGTTGC 62.847 63.158 0.00 0.00 0.00 4.17
2794 3561 1.733402 TTCTTGCCCGCTGGTTGTTG 61.733 55.000 0.00 0.00 0.00 3.33
2795 3562 1.454847 TTCTTGCCCGCTGGTTGTT 60.455 52.632 0.00 0.00 0.00 2.83
2796 3563 2.193536 GTTCTTGCCCGCTGGTTGT 61.194 57.895 0.00 0.00 0.00 3.32
2797 3564 2.192861 TGTTCTTGCCCGCTGGTTG 61.193 57.895 0.00 0.00 0.00 3.77
2798 3565 2.193536 GTGTTCTTGCCCGCTGGTT 61.194 57.895 0.00 0.00 0.00 3.67
2799 3566 2.594592 GTGTTCTTGCCCGCTGGT 60.595 61.111 0.00 0.00 0.00 4.00
2800 3567 2.594303 TGTGTTCTTGCCCGCTGG 60.594 61.111 0.00 0.00 0.00 4.85
2801 3568 2.639286 GTGTGTTCTTGCCCGCTG 59.361 61.111 0.00 0.00 0.00 5.18
2802 3569 2.594592 GGTGTGTTCTTGCCCGCT 60.595 61.111 0.00 0.00 0.00 5.52
2803 3570 2.904866 TGGTGTGTTCTTGCCCGC 60.905 61.111 0.00 0.00 0.00 6.13
2804 3571 2.892334 CGTGGTGTGTTCTTGCCCG 61.892 63.158 0.00 0.00 0.00 6.13
2805 3572 3.030652 CGTGGTGTGTTCTTGCCC 58.969 61.111 0.00 0.00 0.00 5.36
2806 3573 2.331451 GCGTGGTGTGTTCTTGCC 59.669 61.111 0.00 0.00 0.00 4.52
2807 3574 2.331451 GGCGTGGTGTGTTCTTGC 59.669 61.111 0.00 0.00 0.00 4.01
2808 3575 2.101209 GACGGCGTGGTGTGTTCTTG 62.101 60.000 21.19 0.00 0.00 3.02
2809 3576 1.885850 GACGGCGTGGTGTGTTCTT 60.886 57.895 21.19 0.00 0.00 2.52
2810 3577 2.279918 GACGGCGTGGTGTGTTCT 60.280 61.111 21.19 0.00 0.00 3.01
2811 3578 3.698463 CGACGGCGTGGTGTGTTC 61.698 66.667 21.19 0.00 0.00 3.18
2825 3592 2.234913 ATACACCGGGGTCTTGCGAC 62.235 60.000 15.89 0.00 39.49 5.19
2826 3593 1.952102 GATACACCGGGGTCTTGCGA 61.952 60.000 15.89 0.00 0.00 5.10
2827 3594 1.520787 GATACACCGGGGTCTTGCG 60.521 63.158 15.89 0.00 0.00 4.85
2831 3598 1.354101 TTTGTGATACACCGGGGTCT 58.646 50.000 15.89 1.94 32.73 3.85
2905 3672 1.889105 CCATGGGATCAACGGCTCG 60.889 63.158 2.85 0.00 0.00 5.03
2947 3714 5.410132 TCTTTGTGTGTATACAAACCCATCG 59.590 40.000 21.07 7.47 43.46 3.84
2951 3718 4.751098 TCGTCTTTGTGTGTATACAAACCC 59.249 41.667 21.07 4.21 43.46 4.11
3023 3790 2.246469 ACATAGCCATCGATCTGAGCT 58.754 47.619 11.98 11.98 37.58 4.09
3069 3836 6.026947 ACTGTAAAACGAAGCTATCTCTGT 57.973 37.500 0.00 0.00 0.00 3.41
3070 3837 7.009357 GGTTACTGTAAAACGAAGCTATCTCTG 59.991 40.741 1.10 0.00 0.00 3.35
3071 3838 7.034397 GGTTACTGTAAAACGAAGCTATCTCT 58.966 38.462 1.10 0.00 0.00 3.10
3112 3891 8.579850 AATGAAGGCAAAGACATATAAGTTCA 57.420 30.769 0.00 0.00 0.00 3.18
3113 3892 8.131731 GGAATGAAGGCAAAGACATATAAGTTC 58.868 37.037 0.00 0.00 0.00 3.01
3114 3893 7.201732 CGGAATGAAGGCAAAGACATATAAGTT 60.202 37.037 0.00 0.00 0.00 2.66
3115 3894 6.260936 CGGAATGAAGGCAAAGACATATAAGT 59.739 38.462 0.00 0.00 0.00 2.24
3116 3895 6.483307 TCGGAATGAAGGCAAAGACATATAAG 59.517 38.462 0.00 0.00 0.00 1.73
3117 3896 6.353323 TCGGAATGAAGGCAAAGACATATAA 58.647 36.000 0.00 0.00 0.00 0.98
3118 3897 5.924356 TCGGAATGAAGGCAAAGACATATA 58.076 37.500 0.00 0.00 0.00 0.86
3119 3898 4.780815 TCGGAATGAAGGCAAAGACATAT 58.219 39.130 0.00 0.00 0.00 1.78
3120 3899 4.191544 CTCGGAATGAAGGCAAAGACATA 58.808 43.478 0.00 0.00 0.00 2.29
3121 3900 3.012518 CTCGGAATGAAGGCAAAGACAT 58.987 45.455 0.00 0.00 0.00 3.06
3122 3901 2.426522 CTCGGAATGAAGGCAAAGACA 58.573 47.619 0.00 0.00 0.00 3.41
3123 3902 1.131315 GCTCGGAATGAAGGCAAAGAC 59.869 52.381 0.00 0.00 0.00 3.01
3124 3903 1.453155 GCTCGGAATGAAGGCAAAGA 58.547 50.000 0.00 0.00 0.00 2.52
3125 3904 0.453390 GGCTCGGAATGAAGGCAAAG 59.547 55.000 0.00 0.00 0.00 2.77
3126 3905 0.251121 TGGCTCGGAATGAAGGCAAA 60.251 50.000 0.00 0.00 33.93 3.68
3127 3906 0.034186 ATGGCTCGGAATGAAGGCAA 60.034 50.000 2.66 0.00 40.13 4.52
3128 3907 0.836606 TATGGCTCGGAATGAAGGCA 59.163 50.000 0.95 0.95 40.95 4.75
3129 3908 2.191128 ATATGGCTCGGAATGAAGGC 57.809 50.000 0.00 0.00 0.00 4.35
3130 3909 5.765182 ACTTTTATATGGCTCGGAATGAAGG 59.235 40.000 0.00 0.00 0.00 3.46
3131 3910 6.867662 ACTTTTATATGGCTCGGAATGAAG 57.132 37.500 0.00 0.00 0.00 3.02
3132 3911 8.617809 GTTTACTTTTATATGGCTCGGAATGAA 58.382 33.333 0.00 0.00 0.00 2.57
3133 3912 7.990886 AGTTTACTTTTATATGGCTCGGAATGA 59.009 33.333 0.00 0.00 0.00 2.57
3134 3913 8.154649 AGTTTACTTTTATATGGCTCGGAATG 57.845 34.615 0.00 0.00 0.00 2.67
3135 3914 8.747538 AAGTTTACTTTTATATGGCTCGGAAT 57.252 30.769 0.00 0.00 30.82 3.01
3136 3915 7.281549 GGAAGTTTACTTTTATATGGCTCGGAA 59.718 37.037 0.00 0.00 36.11 4.30
3137 3916 6.764560 GGAAGTTTACTTTTATATGGCTCGGA 59.235 38.462 0.00 0.00 36.11 4.55
3138 3917 6.292703 CGGAAGTTTACTTTTATATGGCTCGG 60.293 42.308 0.00 0.00 36.11 4.63
3139 3918 6.257193 ACGGAAGTTTACTTTTATATGGCTCG 59.743 38.462 0.00 0.00 46.40 5.03
3140 3919 7.549615 ACGGAAGTTTACTTTTATATGGCTC 57.450 36.000 0.00 0.00 46.40 4.70
3141 3920 9.452287 TTTACGGAAGTTTACTTTTATATGGCT 57.548 29.630 0.00 0.00 46.40 4.75
3166 3945 4.151883 TCAGCAGCTTAAGACCCATTTTT 58.848 39.130 6.67 0.00 0.00 1.94
3167 3946 3.766545 TCAGCAGCTTAAGACCCATTTT 58.233 40.909 6.67 0.00 0.00 1.82
3168 3947 3.439857 TCAGCAGCTTAAGACCCATTT 57.560 42.857 6.67 0.00 0.00 2.32
3169 3948 3.009473 TCTTCAGCAGCTTAAGACCCATT 59.991 43.478 14.06 0.00 0.00 3.16
3170 3949 2.573462 TCTTCAGCAGCTTAAGACCCAT 59.427 45.455 14.06 0.00 0.00 4.00
3171 3950 1.977854 TCTTCAGCAGCTTAAGACCCA 59.022 47.619 14.06 0.00 0.00 4.51
3172 3951 2.626840 CTCTTCAGCAGCTTAAGACCC 58.373 52.381 14.06 0.00 0.00 4.46
3173 3952 2.006169 GCTCTTCAGCAGCTTAAGACC 58.994 52.381 14.06 5.56 46.06 3.85
3185 3964 1.451067 CCTTTCTGCCTGCTCTTCAG 58.549 55.000 0.00 0.00 42.49 3.02
3186 3965 0.607489 GCCTTTCTGCCTGCTCTTCA 60.607 55.000 0.00 0.00 0.00 3.02
3187 3966 1.642952 CGCCTTTCTGCCTGCTCTTC 61.643 60.000 0.00 0.00 0.00 2.87
3188 3967 1.673665 CGCCTTTCTGCCTGCTCTT 60.674 57.895 0.00 0.00 0.00 2.85
3189 3968 2.046507 CGCCTTTCTGCCTGCTCT 60.047 61.111 0.00 0.00 0.00 4.09
3190 3969 3.808656 GCGCCTTTCTGCCTGCTC 61.809 66.667 0.00 0.00 0.00 4.26
3206 3985 1.079888 CAAATTCAACAGCCCGGGC 60.080 57.895 39.29 39.29 42.33 6.13
3207 3986 0.527565 CTCAAATTCAACAGCCCGGG 59.472 55.000 19.09 19.09 0.00 5.73
3208 3987 1.533625 TCTCAAATTCAACAGCCCGG 58.466 50.000 0.00 0.00 0.00 5.73
3209 3988 2.669391 GCTTCTCAAATTCAACAGCCCG 60.669 50.000 0.00 0.00 0.00 6.13
3210 3989 2.669391 CGCTTCTCAAATTCAACAGCCC 60.669 50.000 0.00 0.00 0.00 5.19
3211 3990 2.589014 CGCTTCTCAAATTCAACAGCC 58.411 47.619 0.00 0.00 0.00 4.85
3212 3991 2.589014 CCGCTTCTCAAATTCAACAGC 58.411 47.619 0.00 0.00 0.00 4.40
3213 3992 2.554032 ACCCGCTTCTCAAATTCAACAG 59.446 45.455 0.00 0.00 0.00 3.16
3214 3993 2.582052 ACCCGCTTCTCAAATTCAACA 58.418 42.857 0.00 0.00 0.00 3.33
3215 3994 4.438744 CCATACCCGCTTCTCAAATTCAAC 60.439 45.833 0.00 0.00 0.00 3.18
3216 3995 3.694072 CCATACCCGCTTCTCAAATTCAA 59.306 43.478 0.00 0.00 0.00 2.69
3217 3996 3.054728 TCCATACCCGCTTCTCAAATTCA 60.055 43.478 0.00 0.00 0.00 2.57
3218 3997 3.312697 GTCCATACCCGCTTCTCAAATTC 59.687 47.826 0.00 0.00 0.00 2.17
3219 3998 3.279434 GTCCATACCCGCTTCTCAAATT 58.721 45.455 0.00 0.00 0.00 1.82
3220 3999 2.741878 CGTCCATACCCGCTTCTCAAAT 60.742 50.000 0.00 0.00 0.00 2.32
3221 4000 1.404986 CGTCCATACCCGCTTCTCAAA 60.405 52.381 0.00 0.00 0.00 2.69
3222 4001 0.174845 CGTCCATACCCGCTTCTCAA 59.825 55.000 0.00 0.00 0.00 3.02
3223 4002 0.681887 TCGTCCATACCCGCTTCTCA 60.682 55.000 0.00 0.00 0.00 3.27
3224 4003 0.674534 ATCGTCCATACCCGCTTCTC 59.325 55.000 0.00 0.00 0.00 2.87
3225 4004 1.991121 TATCGTCCATACCCGCTTCT 58.009 50.000 0.00 0.00 0.00 2.85
3226 4005 2.806608 TTATCGTCCATACCCGCTTC 57.193 50.000 0.00 0.00 0.00 3.86
3227 4006 3.463944 CTTTTATCGTCCATACCCGCTT 58.536 45.455 0.00 0.00 0.00 4.68
3228 4007 2.224209 CCTTTTATCGTCCATACCCGCT 60.224 50.000 0.00 0.00 0.00 5.52
3229 4008 2.140717 CCTTTTATCGTCCATACCCGC 58.859 52.381 0.00 0.00 0.00 6.13
3230 4009 3.464111 ACCTTTTATCGTCCATACCCG 57.536 47.619 0.00 0.00 0.00 5.28
3231 4010 7.553760 TCTTTTAACCTTTTATCGTCCATACCC 59.446 37.037 0.00 0.00 0.00 3.69
3232 4011 8.496707 TCTTTTAACCTTTTATCGTCCATACC 57.503 34.615 0.00 0.00 0.00 2.73
3236 4015 9.729281 ACTAATCTTTTAACCTTTTATCGTCCA 57.271 29.630 0.00 0.00 0.00 4.02
3243 4022 9.528489 AGCCATGACTAATCTTTTAACCTTTTA 57.472 29.630 0.00 0.00 0.00 1.52
3244 4023 8.422577 AGCCATGACTAATCTTTTAACCTTTT 57.577 30.769 0.00 0.00 0.00 2.27
3245 4024 8.422577 AAGCCATGACTAATCTTTTAACCTTT 57.577 30.769 0.00 0.00 0.00 3.11
3246 4025 8.957466 GTAAGCCATGACTAATCTTTTAACCTT 58.043 33.333 0.00 0.00 0.00 3.50
3247 4026 7.556635 GGTAAGCCATGACTAATCTTTTAACCT 59.443 37.037 0.00 0.00 34.09 3.50
3248 4027 7.338449 TGGTAAGCCATGACTAATCTTTTAACC 59.662 37.037 0.00 0.00 40.46 2.85
3249 4028 8.276252 TGGTAAGCCATGACTAATCTTTTAAC 57.724 34.615 0.00 0.00 40.46 2.01
3250 4029 7.067008 GCTGGTAAGCCATGACTAATCTTTTAA 59.933 37.037 0.00 0.00 45.05 1.52
3251 4030 6.542370 GCTGGTAAGCCATGACTAATCTTTTA 59.458 38.462 0.00 0.00 45.05 1.52
3252 4031 5.358160 GCTGGTAAGCCATGACTAATCTTTT 59.642 40.000 0.00 0.00 45.05 2.27
3253 4032 4.884164 GCTGGTAAGCCATGACTAATCTTT 59.116 41.667 0.00 0.00 45.05 2.52
3254 4033 4.455606 GCTGGTAAGCCATGACTAATCTT 58.544 43.478 0.00 0.00 45.05 2.40
3255 4034 4.078639 GCTGGTAAGCCATGACTAATCT 57.921 45.455 0.00 0.00 45.05 2.40
3256 4035 6.519043 TCATAGCTGGTAAGCCATGACTAATC 60.519 42.308 4.97 0.00 46.39 1.75
3257 4036 5.307976 TCATAGCTGGTAAGCCATGACTAAT 59.692 40.000 4.97 0.00 46.39 1.73
3258 4037 4.653801 TCATAGCTGGTAAGCCATGACTAA 59.346 41.667 4.97 0.00 46.39 2.24
3259 4038 4.223144 TCATAGCTGGTAAGCCATGACTA 58.777 43.478 4.97 0.00 46.39 2.59
3260 4039 3.041211 TCATAGCTGGTAAGCCATGACT 58.959 45.455 4.97 0.00 46.39 3.41
3261 4040 3.397482 CTCATAGCTGGTAAGCCATGAC 58.603 50.000 4.97 0.00 46.39 3.06
3275 4054 7.793927 AGATAAGTAACCAAAAGCTCATAGC 57.206 36.000 0.00 0.00 42.84 2.97
3276 4055 9.994432 CAAAGATAAGTAACCAAAAGCTCATAG 57.006 33.333 0.00 0.00 0.00 2.23
3277 4056 8.458843 GCAAAGATAAGTAACCAAAAGCTCATA 58.541 33.333 0.00 0.00 0.00 2.15
3278 4057 7.177392 AGCAAAGATAAGTAACCAAAAGCTCAT 59.823 33.333 0.00 0.00 0.00 2.90
3279 4058 6.490040 AGCAAAGATAAGTAACCAAAAGCTCA 59.510 34.615 0.00 0.00 0.00 4.26
3280 4059 6.914259 AGCAAAGATAAGTAACCAAAAGCTC 58.086 36.000 0.00 0.00 0.00 4.09
3281 4060 6.901081 AGCAAAGATAAGTAACCAAAAGCT 57.099 33.333 0.00 0.00 0.00 3.74
3282 4061 9.290483 GAATAGCAAAGATAAGTAACCAAAAGC 57.710 33.333 0.00 0.00 0.00 3.51
3285 4064 9.733556 TCAGAATAGCAAAGATAAGTAACCAAA 57.266 29.630 0.00 0.00 0.00 3.28
3286 4065 9.733556 TTCAGAATAGCAAAGATAAGTAACCAA 57.266 29.630 0.00 0.00 0.00 3.67
3287 4066 9.905713 ATTCAGAATAGCAAAGATAAGTAACCA 57.094 29.630 0.00 0.00 0.00 3.67
3292 4071 9.453572 TGTCAATTCAGAATAGCAAAGATAAGT 57.546 29.630 0.00 0.00 0.00 2.24
3296 4075 8.800332 AGTTTGTCAATTCAGAATAGCAAAGAT 58.200 29.630 14.73 8.22 0.00 2.40
3297 4076 8.169977 AGTTTGTCAATTCAGAATAGCAAAGA 57.830 30.769 14.73 0.00 0.00 2.52
3298 4077 8.807667 AAGTTTGTCAATTCAGAATAGCAAAG 57.192 30.769 14.73 0.00 0.00 2.77
3299 4078 9.897744 CTAAGTTTGTCAATTCAGAATAGCAAA 57.102 29.630 12.15 12.15 0.00 3.68
3300 4079 9.066892 ACTAAGTTTGTCAATTCAGAATAGCAA 57.933 29.630 0.00 0.13 0.00 3.91
3301 4080 8.621532 ACTAAGTTTGTCAATTCAGAATAGCA 57.378 30.769 0.00 0.00 0.00 3.49
3305 4084 9.014297 CCCTTACTAAGTTTGTCAATTCAGAAT 57.986 33.333 0.00 0.00 0.00 2.40
3306 4085 7.040686 GCCCTTACTAAGTTTGTCAATTCAGAA 60.041 37.037 0.00 0.00 0.00 3.02
3307 4086 6.430000 GCCCTTACTAAGTTTGTCAATTCAGA 59.570 38.462 0.00 0.00 0.00 3.27
3308 4087 6.206634 TGCCCTTACTAAGTTTGTCAATTCAG 59.793 38.462 0.00 0.00 0.00 3.02
3309 4088 6.065374 TGCCCTTACTAAGTTTGTCAATTCA 58.935 36.000 0.00 0.00 0.00 2.57
3310 4089 6.569179 TGCCCTTACTAAGTTTGTCAATTC 57.431 37.500 0.00 0.00 0.00 2.17
3311 4090 7.539034 AATGCCCTTACTAAGTTTGTCAATT 57.461 32.000 0.00 0.00 0.00 2.32
3312 4091 7.451566 AGAAATGCCCTTACTAAGTTTGTCAAT 59.548 33.333 0.00 0.00 0.00 2.57
3313 4092 6.775629 AGAAATGCCCTTACTAAGTTTGTCAA 59.224 34.615 0.00 0.00 0.00 3.18
3314 4093 6.303839 AGAAATGCCCTTACTAAGTTTGTCA 58.696 36.000 0.00 0.00 0.00 3.58
3315 4094 6.819397 AGAAATGCCCTTACTAAGTTTGTC 57.181 37.500 0.00 0.00 0.00 3.18
3316 4095 7.459234 ACTAGAAATGCCCTTACTAAGTTTGT 58.541 34.615 0.00 0.00 0.00 2.83
3317 4096 7.201530 CGACTAGAAATGCCCTTACTAAGTTTG 60.202 40.741 0.00 0.00 0.00 2.93
3318 4097 6.817140 CGACTAGAAATGCCCTTACTAAGTTT 59.183 38.462 0.00 0.00 0.00 2.66
3319 4098 6.154021 TCGACTAGAAATGCCCTTACTAAGTT 59.846 38.462 0.00 0.00 0.00 2.66
3320 4099 5.655532 TCGACTAGAAATGCCCTTACTAAGT 59.344 40.000 0.00 0.00 0.00 2.24
3321 4100 6.145338 TCGACTAGAAATGCCCTTACTAAG 57.855 41.667 0.00 0.00 0.00 2.18
3322 4101 6.239232 GGATCGACTAGAAATGCCCTTACTAA 60.239 42.308 0.00 0.00 0.00 2.24
3323 4102 5.243283 GGATCGACTAGAAATGCCCTTACTA 59.757 44.000 0.00 0.00 0.00 1.82
3324 4103 4.039366 GGATCGACTAGAAATGCCCTTACT 59.961 45.833 0.00 0.00 0.00 2.24
3325 4104 4.308265 GGATCGACTAGAAATGCCCTTAC 58.692 47.826 0.00 0.00 0.00 2.34
3326 4105 3.323979 GGGATCGACTAGAAATGCCCTTA 59.676 47.826 0.00 0.00 31.49 2.69
3327 4106 2.104963 GGGATCGACTAGAAATGCCCTT 59.895 50.000 0.00 0.00 31.49 3.95
3328 4107 1.694696 GGGATCGACTAGAAATGCCCT 59.305 52.381 0.00 0.00 31.49 5.19
3329 4108 1.270893 GGGGATCGACTAGAAATGCCC 60.271 57.143 14.11 14.11 42.81 5.36
3330 4109 1.416401 TGGGGATCGACTAGAAATGCC 59.584 52.381 0.00 1.29 0.00 4.40
3331 4110 2.910688 TGGGGATCGACTAGAAATGC 57.089 50.000 0.00 0.00 0.00 3.56
3332 4111 5.701290 GGTTATTGGGGATCGACTAGAAATG 59.299 44.000 0.00 0.00 0.00 2.32
3333 4112 5.510861 CGGTTATTGGGGATCGACTAGAAAT 60.511 44.000 0.00 0.00 0.00 2.17
3334 4113 4.202182 CGGTTATTGGGGATCGACTAGAAA 60.202 45.833 0.00 0.00 0.00 2.52
3335 4114 3.319972 CGGTTATTGGGGATCGACTAGAA 59.680 47.826 0.00 0.00 0.00 2.10
3336 4115 2.889045 CGGTTATTGGGGATCGACTAGA 59.111 50.000 0.00 0.00 0.00 2.43
3337 4116 2.029290 CCGGTTATTGGGGATCGACTAG 60.029 54.545 0.00 0.00 0.00 2.57
3338 4117 1.965643 CCGGTTATTGGGGATCGACTA 59.034 52.381 0.00 0.00 0.00 2.59
3339 4118 0.756903 CCGGTTATTGGGGATCGACT 59.243 55.000 0.00 0.00 0.00 4.18
3340 4119 0.466963 ACCGGTTATTGGGGATCGAC 59.533 55.000 0.00 0.00 0.00 4.20
3341 4120 1.205966 AACCGGTTATTGGGGATCGA 58.794 50.000 20.78 0.00 0.00 3.59
3342 4121 2.549349 CCTAACCGGTTATTGGGGATCG 60.549 54.545 26.70 11.83 0.00 3.69
3343 4122 3.136009 CCTAACCGGTTATTGGGGATC 57.864 52.381 26.70 0.00 0.00 3.36
3346 4125 1.134007 GTCCCTAACCGGTTATTGGGG 60.134 57.143 34.75 32.99 46.66 4.96
3347 4126 1.134007 GGTCCCTAACCGGTTATTGGG 60.134 57.143 32.22 32.22 38.58 4.12
3348 4127 2.336945 GGTCCCTAACCGGTTATTGG 57.663 55.000 26.70 26.43 38.58 3.16
3358 4137 1.398174 GGGTCGGCTAGGTCCCTAAC 61.398 65.000 0.00 0.00 37.18 2.34
3359 4138 1.075748 GGGTCGGCTAGGTCCCTAA 60.076 63.158 0.00 0.00 37.18 2.69
3360 4139 2.605299 GGGTCGGCTAGGTCCCTA 59.395 66.667 0.00 0.00 37.18 3.53
3361 4140 4.477119 GGGGTCGGCTAGGTCCCT 62.477 72.222 0.00 0.00 39.80 4.20
3362 4141 4.791069 TGGGGTCGGCTAGGTCCC 62.791 72.222 0.00 0.00 39.22 4.46
3363 4142 2.041206 GATTGGGGTCGGCTAGGTCC 62.041 65.000 0.00 0.00 0.00 4.46
3364 4143 1.446366 GATTGGGGTCGGCTAGGTC 59.554 63.158 0.00 0.00 0.00 3.85
3365 4144 2.432300 CGATTGGGGTCGGCTAGGT 61.432 63.158 0.00 0.00 37.94 3.08
3366 4145 2.421739 CGATTGGGGTCGGCTAGG 59.578 66.667 0.00 0.00 37.94 3.02
3374 4153 0.986550 CCCCTAAGACCGATTGGGGT 60.987 60.000 3.39 0.00 46.80 4.95
3376 4155 0.759346 CTCCCCTAAGACCGATTGGG 59.241 60.000 3.39 0.00 40.75 4.12
3377 4156 1.497161 ACTCCCCTAAGACCGATTGG 58.503 55.000 0.00 0.00 42.84 3.16
3378 4157 4.748277 TTTACTCCCCTAAGACCGATTG 57.252 45.455 0.00 0.00 0.00 2.67
3379 4158 5.767277 TTTTTACTCCCCTAAGACCGATT 57.233 39.130 0.00 0.00 0.00 3.34
3380 4159 5.970501 ATTTTTACTCCCCTAAGACCGAT 57.029 39.130 0.00 0.00 0.00 4.18
3381 4160 5.767277 AATTTTTACTCCCCTAAGACCGA 57.233 39.130 0.00 0.00 0.00 4.69
3382 4161 5.819379 GGTAATTTTTACTCCCCTAAGACCG 59.181 44.000 0.00 0.00 0.00 4.79
3383 4162 6.069206 AGGGTAATTTTTACTCCCCTAAGACC 60.069 42.308 0.00 0.00 40.68 3.85
3384 4163 6.966751 AGGGTAATTTTTACTCCCCTAAGAC 58.033 40.000 0.00 0.00 40.68 3.01
3385 4164 7.593351 AAGGGTAATTTTTACTCCCCTAAGA 57.407 36.000 0.00 0.00 41.62 2.10
3386 4165 9.570468 GATAAGGGTAATTTTTACTCCCCTAAG 57.430 37.037 0.00 0.00 41.62 2.18
3387 4166 8.505246 GGATAAGGGTAATTTTTACTCCCCTAA 58.495 37.037 0.00 0.00 41.62 2.69
3388 4167 7.202121 CGGATAAGGGTAATTTTTACTCCCCTA 60.202 40.741 0.00 0.00 41.62 3.53
3389 4168 6.410041 CGGATAAGGGTAATTTTTACTCCCCT 60.410 42.308 0.00 0.00 44.35 4.79
3390 4169 5.766670 CGGATAAGGGTAATTTTTACTCCCC 59.233 44.000 0.00 0.00 38.97 4.81
3391 4170 6.359804 ACGGATAAGGGTAATTTTTACTCCC 58.640 40.000 0.00 0.00 38.50 4.30
3392 4171 6.201615 CGACGGATAAGGGTAATTTTTACTCC 59.798 42.308 0.00 0.00 0.00 3.85
3393 4172 6.292542 GCGACGGATAAGGGTAATTTTTACTC 60.293 42.308 0.00 0.00 0.00 2.59
3394 4173 5.525012 GCGACGGATAAGGGTAATTTTTACT 59.475 40.000 0.00 0.00 0.00 2.24
3395 4174 5.556947 CGCGACGGATAAGGGTAATTTTTAC 60.557 44.000 0.00 0.00 0.00 2.01
3396 4175 4.507388 CGCGACGGATAAGGGTAATTTTTA 59.493 41.667 0.00 0.00 0.00 1.52
3397 4176 3.310501 CGCGACGGATAAGGGTAATTTTT 59.689 43.478 0.00 0.00 0.00 1.94
3398 4177 2.867975 CGCGACGGATAAGGGTAATTTT 59.132 45.455 0.00 0.00 0.00 1.82
3399 4178 2.476821 CGCGACGGATAAGGGTAATTT 58.523 47.619 0.00 0.00 0.00 1.82
3400 4179 2.144482 CGCGACGGATAAGGGTAATT 57.856 50.000 0.00 0.00 0.00 1.40
3401 4180 3.879912 CGCGACGGATAAGGGTAAT 57.120 52.632 0.00 0.00 0.00 1.89
3413 4192 2.701073 ATATAAGGAGAACCGCGACG 57.299 50.000 8.23 0.00 41.83 5.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.