Multiple sequence alignment - TraesCS7D01G520100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G520100 chr7D 100.000 4325 0 0 1 4325 617825525 617821201 0.000000e+00 7987.0
1 TraesCS7D01G520100 chr7D 90.365 384 24 7 3 375 64510683 64510302 3.890000e-135 492.0
2 TraesCS7D01G520100 chr7D 91.803 61 5 0 2854 2914 617777401 617777461 7.710000e-13 86.1
3 TraesCS7D01G520100 chr7D 92.982 57 3 1 3497 3552 217838596 217838540 9.970000e-12 82.4
4 TraesCS7D01G520100 chr7D 92.593 54 4 0 3499 3552 421869752 421869699 1.290000e-10 78.7
5 TraesCS7D01G520100 chr7D 94.000 50 2 1 3497 3545 168270910 168270861 1.670000e-09 75.0
6 TraesCS7D01G520100 chr7A 85.022 2310 239 64 950 3240 711597640 711599861 0.000000e+00 2250.0
7 TraesCS7D01G520100 chr7A 84.163 221 14 13 699 907 711597415 711597626 1.230000e-45 195.0
8 TraesCS7D01G520100 chr7A 93.220 59 3 1 3497 3554 726899530 726899588 7.710000e-13 86.1
9 TraesCS7D01G520100 chr7B 91.518 1179 86 5 2243 3418 712078991 712077824 0.000000e+00 1611.0
10 TraesCS7D01G520100 chr7B 83.209 935 126 19 2318 3240 711911217 711912132 0.000000e+00 828.0
11 TraesCS7D01G520100 chr7B 88.561 542 31 21 927 1457 712080402 712079881 2.840000e-176 628.0
12 TraesCS7D01G520100 chr7B 88.967 426 25 8 450 858 712080846 712080426 1.390000e-139 507.0
13 TraesCS7D01G520100 chr7B 88.754 329 23 5 1486 1810 711888386 711888704 1.460000e-104 390.0
14 TraesCS7D01G520100 chr7B 86.006 343 34 10 1486 1822 712079823 712079489 5.320000e-94 355.0
15 TraesCS7D01G520100 chr7B 85.902 305 17 5 941 1245 711886608 711886886 7.030000e-78 302.0
16 TraesCS7D01G520100 chr7B 94.702 151 8 0 1238 1388 711888123 711888273 7.230000e-58 235.0
17 TraesCS7D01G520100 chr7B 82.463 268 20 15 606 850 711886288 711886551 4.380000e-50 209.0
18 TraesCS7D01G520100 chr5D 97.047 779 20 2 3547 4325 316731470 316730695 0.000000e+00 1308.0
19 TraesCS7D01G520100 chr5D 77.051 963 165 30 2243 3192 318887296 318888215 1.800000e-138 503.0
20 TraesCS7D01G520100 chr5D 75.949 948 164 29 2260 3195 321378391 321377496 3.090000e-116 429.0
21 TraesCS7D01G520100 chr5D 80.401 449 51 16 3 422 219518238 219518678 1.510000e-79 307.0
22 TraesCS7D01G520100 chr5D 85.549 173 13 7 1006 1168 318883826 318883996 2.070000e-38 171.0
23 TraesCS7D01G520100 chr5D 91.525 59 5 0 3498 3556 27453148 27453090 9.970000e-12 82.4
24 TraesCS7D01G520100 chr5D 92.857 56 3 1 3498 3552 442830171 442830226 3.590000e-11 80.5
25 TraesCS7D01G520100 chr5D 92.308 52 3 1 3490 3540 43199986 43199935 6.000000e-09 73.1
26 TraesCS7D01G520100 chr6D 93.706 715 26 4 2526 3240 276589022 276588327 0.000000e+00 1053.0
27 TraesCS7D01G520100 chr6D 84.232 482 34 18 1 451 329074027 329074497 8.590000e-117 431.0
28 TraesCS7D01G520100 chr6D 93.478 46 3 0 3495 3540 15247089 15247134 7.760000e-08 69.4
29 TraesCS7D01G520100 chr6D 93.617 47 2 1 3495 3540 297665270 297665316 7.760000e-08 69.4
30 TraesCS7D01G520100 chr6D 93.333 45 2 1 3497 3540 313020271 313020227 1.000000e-06 65.8
31 TraesCS7D01G520100 chr6D 91.667 48 3 1 3494 3540 382616684 382616637 1.000000e-06 65.8
32 TraesCS7D01G520100 chr6D 93.182 44 2 1 3498 3540 354114242 354114285 3.610000e-06 63.9
33 TraesCS7D01G520100 chr6D 88.679 53 3 2 3499 3548 5775583 5775635 1.300000e-05 62.1
34 TraesCS7D01G520100 chr6A 92.485 652 41 6 3498 4148 392963487 392964131 0.000000e+00 926.0
35 TraesCS7D01G520100 chr6A 88.802 384 34 8 1 375 598641220 598641603 3.050000e-126 462.0
36 TraesCS7D01G520100 chr6A 88.743 382 29 9 7 375 457076411 457076031 5.100000e-124 455.0
37 TraesCS7D01G520100 chr6A 92.000 75 5 1 421 495 567724500 567724573 2.130000e-18 104.0
38 TraesCS7D01G520100 chr6A 93.878 49 2 1 3497 3544 11670940 11670892 6.000000e-09 73.1
39 TraesCS7D01G520100 chr6A 93.878 49 2 1 3497 3544 11722935 11722887 6.000000e-09 73.1
40 TraesCS7D01G520100 chr6A 90.741 54 3 2 3493 3545 420585773 420585721 2.160000e-08 71.3
41 TraesCS7D01G520100 chr2A 93.924 609 32 5 3543 4148 749859510 749858904 0.000000e+00 915.0
42 TraesCS7D01G520100 chr2A 89.239 381 33 7 1 375 736380466 736380844 1.820000e-128 470.0
43 TraesCS7D01G520100 chr2A 89.005 382 33 8 1 375 736373535 736373914 8.470000e-127 464.0
44 TraesCS7D01G520100 chr2A 88.889 387 27 12 3 375 749965756 749966140 3.050000e-126 462.0
45 TraesCS7D01G520100 chr2A 98.907 183 2 0 4143 4325 749857980 749857798 1.160000e-85 327.0
46 TraesCS7D01G520100 chr2A 89.189 74 8 0 417 490 753537314 753537387 4.610000e-15 93.5
47 TraesCS7D01G520100 chr2A 93.103 58 3 1 3496 3552 718645299 718645242 2.770000e-12 84.2
48 TraesCS7D01G520100 chr4D 98.577 492 7 0 3834 4325 455588151 455588642 0.000000e+00 870.0
49 TraesCS7D01G520100 chr4D 96.656 299 10 0 3539 3837 455586145 455586443 8.350000e-137 497.0
50 TraesCS7D01G520100 chr4D 88.918 379 30 9 4 375 500549505 500549878 1.420000e-124 457.0
51 TraesCS7D01G520100 chr4D 96.053 228 7 1 3921 4148 8684066 8684291 1.900000e-98 370.0
52 TraesCS7D01G520100 chr4D 96.739 184 6 0 4142 4325 8771599 8771782 1.510000e-79 307.0
53 TraesCS7D01G520100 chr4D 94.737 57 2 1 3497 3552 8683545 8683601 2.140000e-13 87.9
54 TraesCS7D01G520100 chr4D 93.103 58 3 1 3496 3552 455586084 455586141 2.770000e-12 84.2
55 TraesCS7D01G520100 chr4D 92.683 41 2 1 3503 3542 137020994 137021034 1.680000e-04 58.4
56 TraesCS7D01G520100 chr2B 92.653 490 20 8 3659 4148 272676186 272676659 0.000000e+00 691.0
57 TraesCS7D01G520100 chr2B 97.268 183 5 0 4143 4325 272677746 272677928 1.170000e-80 311.0
58 TraesCS7D01G520100 chr2B 97.037 135 4 0 4191 4325 272678035 272678169 1.210000e-55 228.0
59 TraesCS7D01G520100 chr2B 96.296 108 3 1 3560 3666 272675573 272675680 4.450000e-40 176.0
60 TraesCS7D01G520100 chr5A 90.947 475 37 4 3678 4148 246850642 246851114 6.100000e-178 634.0
61 TraesCS7D01G520100 chr5A 76.688 948 165 30 2258 3192 413236278 413237182 3.910000e-130 475.0
62 TraesCS7D01G520100 chr5A 93.333 180 12 0 4143 4322 246852094 246852273 2.560000e-67 267.0
63 TraesCS7D01G520100 chr5A 86.207 174 10 10 1006 1168 413232185 413232355 4.450000e-40 176.0
64 TraesCS7D01G520100 chr5A 85.876 177 11 10 1006 1171 415571942 415571769 4.450000e-40 176.0
65 TraesCS7D01G520100 chr5A 84.783 138 18 2 1676 1810 415570963 415570826 7.540000e-28 135.0
66 TraesCS7D01G520100 chr5A 90.278 72 5 2 3584 3654 246850575 246850645 4.610000e-15 93.5
67 TraesCS7D01G520100 chr5A 91.935 62 4 1 3496 3556 636190594 636190533 7.710000e-13 86.1
68 TraesCS7D01G520100 chr5A 92.982 57 3 1 3497 3552 45750729 45750673 9.970000e-12 82.4
69 TraesCS7D01G520100 chr5A 87.324 71 9 0 420 490 527061942 527061872 9.970000e-12 82.4
70 TraesCS7D01G520100 chr5B 76.843 963 167 26 2243 3192 368720884 368721803 3.890000e-135 492.0
71 TraesCS7D01G520100 chr5B 76.737 950 167 26 2258 3195 372165876 372164969 8.410000e-132 481.0
72 TraesCS7D01G520100 chr5B 85.549 173 13 7 1006 1168 372168329 372168159 2.070000e-38 171.0
73 TraesCS7D01G520100 chr5B 84.971 173 14 8 1006 1168 368695388 368695558 9.620000e-37 165.0
74 TraesCS7D01G520100 chr5B 87.069 116 15 0 1693 1808 368698053 368698168 9.760000e-27 132.0
75 TraesCS7D01G520100 chr5B 92.453 53 2 2 3494 3544 564719370 564719422 1.670000e-09 75.0
76 TraesCS7D01G520100 chr1D 90.026 381 31 6 1 375 350143577 350143198 1.810000e-133 486.0
77 TraesCS7D01G520100 chr1D 88.542 384 32 6 1 375 470919453 470919073 5.100000e-124 455.0
78 TraesCS7D01G520100 chr1D 77.704 453 35 28 3 433 403330682 403331090 2.620000e-52 217.0
79 TraesCS7D01G520100 chr1D 93.103 58 3 1 3496 3552 490444244 490444187 2.770000e-12 84.2
80 TraesCS7D01G520100 chr1D 93.478 46 3 0 3495 3540 65839393 65839438 7.760000e-08 69.4
81 TraesCS7D01G520100 chr1D 93.333 45 3 0 3496 3540 360381574 360381618 2.790000e-07 67.6
82 TraesCS7D01G520100 chr1D 95.122 41 2 0 3505 3545 414898307 414898267 1.000000e-06 65.8
83 TraesCS7D01G520100 chr3A 82.850 379 37 13 3 365 548262554 548262920 9.030000e-82 315.0
84 TraesCS7D01G520100 chr3A 80.051 396 36 15 62 432 569411718 569411341 2.000000e-63 254.0
85 TraesCS7D01G520100 chr3A 91.803 61 4 1 3493 3552 222447196 222447256 2.770000e-12 84.2
86 TraesCS7D01G520100 chrUn 84.806 283 33 7 1 281 33347625 33347899 4.260000e-70 276.0
87 TraesCS7D01G520100 chrUn 85.876 177 11 10 1006 1171 480390201 480390028 4.450000e-40 176.0
88 TraesCS7D01G520100 chrUn 89.474 76 3 1 349 424 465480049 465480119 1.660000e-14 91.6
89 TraesCS7D01G520100 chrUn 93.333 45 2 1 3497 3540 91458179 91458223 1.000000e-06 65.8
90 TraesCS7D01G520100 chrUn 93.182 44 2 1 3498 3540 331436918 331436961 3.610000e-06 63.9
91 TraesCS7D01G520100 chr3B 78.901 455 50 22 1 424 815148811 815149250 2.560000e-67 267.0
92 TraesCS7D01G520100 chr3B 88.462 78 8 1 413 490 677764002 677763926 4.610000e-15 93.5
93 TraesCS7D01G520100 chr3B 87.324 71 9 0 420 490 213913571 213913501 9.970000e-12 82.4
94 TraesCS7D01G520100 chr3D 77.778 288 36 13 142 418 42749302 42749572 7.490000e-33 152.0
95 TraesCS7D01G520100 chr2D 88.312 77 9 0 420 496 613817988 613817912 4.610000e-15 93.5
96 TraesCS7D01G520100 chr2D 86.747 83 10 1 417 498 32029813 32029895 1.660000e-14 91.6
97 TraesCS7D01G520100 chr1B 94.340 53 3 0 3497 3549 4598681 4598733 9.970000e-12 82.4
98 TraesCS7D01G520100 chr1A 95.556 45 1 1 3509 3552 504611823 504611779 2.160000e-08 71.3
99 TraesCS7D01G520100 chr1A 95.349 43 2 0 3498 3540 59611095 59611137 7.760000e-08 69.4
100 TraesCS7D01G520100 chr1A 93.617 47 2 1 3498 3543 107478106 107478060 7.760000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G520100 chr7D 617821201 617825525 4324 True 7987.000000 7987 100.000000 1 4325 1 chr7D.!!$R5 4324
1 TraesCS7D01G520100 chr7A 711597415 711599861 2446 False 1222.500000 2250 84.592500 699 3240 2 chr7A.!!$F2 2541
2 TraesCS7D01G520100 chr7B 711911217 711912132 915 False 828.000000 828 83.209000 2318 3240 1 chr7B.!!$F1 922
3 TraesCS7D01G520100 chr7B 712077824 712080846 3022 True 775.250000 1611 88.763000 450 3418 4 chr7B.!!$R1 2968
4 TraesCS7D01G520100 chr7B 711886288 711888704 2416 False 284.000000 390 87.955250 606 1810 4 chr7B.!!$F2 1204
5 TraesCS7D01G520100 chr5D 316730695 316731470 775 True 1308.000000 1308 97.047000 3547 4325 1 chr5D.!!$R3 778
6 TraesCS7D01G520100 chr5D 321377496 321378391 895 True 429.000000 429 75.949000 2260 3195 1 chr5D.!!$R4 935
7 TraesCS7D01G520100 chr5D 318883826 318888215 4389 False 337.000000 503 81.300000 1006 3192 2 chr5D.!!$F3 2186
8 TraesCS7D01G520100 chr6D 276588327 276589022 695 True 1053.000000 1053 93.706000 2526 3240 1 chr6D.!!$R1 714
9 TraesCS7D01G520100 chr6A 392963487 392964131 644 False 926.000000 926 92.485000 3498 4148 1 chr6A.!!$F1 650
10 TraesCS7D01G520100 chr2A 749857798 749859510 1712 True 621.000000 915 96.415500 3543 4325 2 chr2A.!!$R2 782
11 TraesCS7D01G520100 chr4D 455586084 455588642 2558 False 483.733333 870 96.112000 3496 4325 3 chr4D.!!$F5 829
12 TraesCS7D01G520100 chr4D 8683545 8684291 746 False 228.950000 370 95.395000 3497 4148 2 chr4D.!!$F4 651
13 TraesCS7D01G520100 chr2B 272675573 272678169 2596 False 351.500000 691 95.813500 3560 4325 4 chr2B.!!$F1 765
14 TraesCS7D01G520100 chr5A 246850575 246852273 1698 False 331.500000 634 91.519333 3584 4322 3 chr5A.!!$F1 738
15 TraesCS7D01G520100 chr5A 413232185 413237182 4997 False 325.500000 475 81.447500 1006 3192 2 chr5A.!!$F2 2186
16 TraesCS7D01G520100 chr5B 368720884 368721803 919 False 492.000000 492 76.843000 2243 3192 1 chr5B.!!$F1 949
17 TraesCS7D01G520100 chr5B 372164969 372168329 3360 True 326.000000 481 81.143000 1006 3195 2 chr5B.!!$R1 2189

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
150 151 0.032952 TCTCGCTAAAGCACAACCGT 59.967 50.0 2.44 0.00 42.21 4.83 F
171 172 0.163146 CGTCTCGCGGAAGAAAAACC 59.837 55.0 6.13 0.00 36.85 3.27 F
384 385 0.302890 GAATGGCTGATCGTTGCGAG 59.697 55.0 0.00 0.00 39.91 5.03 F
409 410 0.456312 CGAAGGAGCGCTCGTTAACT 60.456 55.0 36.96 23.16 37.75 2.24 F
957 1023 0.603975 AGCCCAAGAACGAAGCTCAC 60.604 55.0 0.00 0.00 0.00 3.51 F
1642 3133 0.729816 GAGTTCAGACGTCGCAGTCC 60.730 60.0 10.46 0.00 41.83 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1912 5416 0.033228 CTCTGCTTATCAGCCCCTCG 59.967 60.000 0.00 0.00 46.74 4.63 R
2062 5740 0.320073 CACGTACCGAACCATGGTGT 60.320 55.000 20.60 14.88 40.73 4.16 R
2130 5822 0.888736 TTCACCACCCAGCGACAATG 60.889 55.000 0.00 0.00 0.00 2.82 R
2186 5975 1.202256 CGAACGAATCGTCCATCTCCA 60.202 52.381 9.32 0.00 46.52 3.86 R
2187 5976 1.478137 CGAACGAATCGTCCATCTCC 58.522 55.000 9.32 0.00 46.52 3.71 R
3375 7646 0.037975 CTACACACCACCACCGTACC 60.038 60.000 0.00 0.00 0.00 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 3.414700 CACAACCGTGCCTCTCGC 61.415 66.667 0.00 0.00 36.06 5.03
66 67 4.914291 CGGAAGCAAAACCGTGAC 57.086 55.556 0.00 0.00 43.53 3.67
67 68 2.317230 CGGAAGCAAAACCGTGACT 58.683 52.632 0.00 0.00 43.53 3.41
68 69 0.234884 CGGAAGCAAAACCGTGACTC 59.765 55.000 0.00 0.00 43.53 3.36
69 70 1.594331 GGAAGCAAAACCGTGACTCT 58.406 50.000 0.00 0.00 0.00 3.24
70 71 1.531578 GGAAGCAAAACCGTGACTCTC 59.468 52.381 0.00 0.00 0.00 3.20
71 72 1.192534 GAAGCAAAACCGTGACTCTCG 59.807 52.381 0.00 0.00 0.00 4.04
72 73 1.204312 GCAAAACCGTGACTCTCGC 59.796 57.895 0.00 0.00 0.00 5.03
82 83 3.854286 GTGACTCTCGCGAAAGAAAAA 57.146 42.857 17.91 0.00 0.00 1.94
112 113 4.889519 AAACACGTTTTTGTCCGTTTTC 57.110 36.364 0.00 0.00 34.59 2.29
113 114 2.507866 ACACGTTTTTGTCCGTTTTCG 58.492 42.857 0.00 0.00 43.67 3.46
114 115 6.291208 AAAACACGTTTTTGTCCGTTTTCGA 61.291 36.000 0.00 0.00 41.64 3.71
115 116 7.702704 AAAACACGTTTTTGTCCGTTTTCGAA 61.703 34.615 0.00 0.00 41.64 3.71
116 117 9.084666 AAAACACGTTTTTGTCCGTTTTCGAAA 62.085 33.333 6.47 6.47 41.64 3.46
124 125 4.221873 GTTTTCGAAAGGCACGGC 57.778 55.556 10.98 0.00 0.00 5.68
138 139 3.506096 CGGCCGTGACTCTCGCTA 61.506 66.667 19.50 0.00 0.00 4.26
139 140 2.882876 GGCCGTGACTCTCGCTAA 59.117 61.111 0.00 0.00 0.00 3.09
140 141 1.214589 GGCCGTGACTCTCGCTAAA 59.785 57.895 0.00 0.00 0.00 1.85
141 142 0.802607 GGCCGTGACTCTCGCTAAAG 60.803 60.000 0.00 0.00 0.00 1.85
142 143 1.414527 GCCGTGACTCTCGCTAAAGC 61.415 60.000 0.00 0.00 37.78 3.51
143 144 0.109272 CCGTGACTCTCGCTAAAGCA 60.109 55.000 2.44 0.00 42.21 3.91
144 145 0.985549 CGTGACTCTCGCTAAAGCAC 59.014 55.000 2.44 0.00 42.21 4.40
145 146 1.666023 CGTGACTCTCGCTAAAGCACA 60.666 52.381 2.44 0.00 42.21 4.57
146 147 2.404215 GTGACTCTCGCTAAAGCACAA 58.596 47.619 2.44 0.00 42.21 3.33
147 148 2.155924 GTGACTCTCGCTAAAGCACAAC 59.844 50.000 2.44 0.00 42.21 3.32
148 149 1.727335 GACTCTCGCTAAAGCACAACC 59.273 52.381 2.44 0.00 42.21 3.77
149 150 0.716108 CTCTCGCTAAAGCACAACCG 59.284 55.000 2.44 0.00 42.21 4.44
150 151 0.032952 TCTCGCTAAAGCACAACCGT 59.967 50.000 2.44 0.00 42.21 4.83
151 152 0.163788 CTCGCTAAAGCACAACCGTG 59.836 55.000 2.44 0.00 46.56 4.94
168 169 3.545911 GCGTCTCGCGGAAGAAAA 58.454 55.556 6.13 0.00 44.55 2.29
169 170 1.857364 GCGTCTCGCGGAAGAAAAA 59.143 52.632 6.13 0.00 44.55 1.94
170 171 0.450645 GCGTCTCGCGGAAGAAAAAC 60.451 55.000 6.13 0.00 44.55 2.43
171 172 0.163146 CGTCTCGCGGAAGAAAAACC 59.837 55.000 6.13 0.00 36.85 3.27
179 180 3.685836 CGGAAGAAAAACCGTGACTTT 57.314 42.857 0.00 0.00 43.53 2.66
180 181 3.614588 CGGAAGAAAAACCGTGACTTTC 58.385 45.455 0.00 0.00 43.53 2.62
181 182 3.614588 GGAAGAAAAACCGTGACTTTCG 58.385 45.455 0.00 0.00 34.85 3.46
182 183 2.750301 AGAAAAACCGTGACTTTCGC 57.250 45.000 0.00 0.00 34.85 4.70
258 259 6.980051 TTTATCGGAAAGCTAAGAAAGACC 57.020 37.500 0.00 0.00 0.00 3.85
259 260 2.955614 TCGGAAAGCTAAGAAAGACCG 58.044 47.619 0.00 0.00 40.36 4.79
260 261 2.000447 CGGAAAGCTAAGAAAGACCGG 59.000 52.381 0.00 0.00 36.27 5.28
261 262 2.357075 GGAAAGCTAAGAAAGACCGGG 58.643 52.381 6.32 0.00 0.00 5.73
262 263 2.357075 GAAAGCTAAGAAAGACCGGGG 58.643 52.381 6.32 0.00 0.00 5.73
263 264 1.652947 AAGCTAAGAAAGACCGGGGA 58.347 50.000 6.32 0.00 0.00 4.81
264 265 1.652947 AGCTAAGAAAGACCGGGGAA 58.347 50.000 6.32 0.00 0.00 3.97
265 266 1.982958 AGCTAAGAAAGACCGGGGAAA 59.017 47.619 6.32 0.00 0.00 3.13
266 267 2.374170 AGCTAAGAAAGACCGGGGAAAA 59.626 45.455 6.32 0.00 0.00 2.29
267 268 3.151554 GCTAAGAAAGACCGGGGAAAAA 58.848 45.455 6.32 0.00 0.00 1.94
268 269 3.057736 GCTAAGAAAGACCGGGGAAAAAC 60.058 47.826 6.32 0.00 0.00 2.43
269 270 1.991121 AGAAAGACCGGGGAAAAACC 58.009 50.000 6.32 0.00 38.08 3.27
270 271 1.215924 AGAAAGACCGGGGAAAAACCA 59.784 47.619 6.32 0.00 41.20 3.67
271 272 2.033372 GAAAGACCGGGGAAAAACCAA 58.967 47.619 6.32 0.00 41.20 3.67
272 273 2.162264 AAGACCGGGGAAAAACCAAA 57.838 45.000 6.32 0.00 41.20 3.28
273 274 2.162264 AGACCGGGGAAAAACCAAAA 57.838 45.000 6.32 0.00 41.20 2.44
274 275 1.758280 AGACCGGGGAAAAACCAAAAC 59.242 47.619 6.32 0.00 41.20 2.43
275 276 1.481363 GACCGGGGAAAAACCAAAACA 59.519 47.619 6.32 0.00 41.20 2.83
276 277 2.103432 GACCGGGGAAAAACCAAAACAT 59.897 45.455 6.32 0.00 41.20 2.71
277 278 2.103432 ACCGGGGAAAAACCAAAACATC 59.897 45.455 6.32 0.00 41.20 3.06
278 279 2.103263 CCGGGGAAAAACCAAAACATCA 59.897 45.455 0.00 0.00 41.20 3.07
279 280 3.432326 CCGGGGAAAAACCAAAACATCAA 60.432 43.478 0.00 0.00 41.20 2.57
280 281 4.192317 CGGGGAAAAACCAAAACATCAAA 58.808 39.130 0.00 0.00 41.20 2.69
281 282 4.272261 CGGGGAAAAACCAAAACATCAAAG 59.728 41.667 0.00 0.00 41.20 2.77
282 283 5.432645 GGGGAAAAACCAAAACATCAAAGA 58.567 37.500 0.00 0.00 41.20 2.52
283 284 5.883115 GGGGAAAAACCAAAACATCAAAGAA 59.117 36.000 0.00 0.00 41.20 2.52
284 285 6.375736 GGGGAAAAACCAAAACATCAAAGAAA 59.624 34.615 0.00 0.00 41.20 2.52
285 286 7.247728 GGGAAAAACCAAAACATCAAAGAAAC 58.752 34.615 0.00 0.00 41.20 2.78
286 287 7.247728 GGAAAAACCAAAACATCAAAGAAACC 58.752 34.615 0.00 0.00 38.79 3.27
287 288 7.120579 GGAAAAACCAAAACATCAAAGAAACCT 59.879 33.333 0.00 0.00 38.79 3.50
288 289 9.157104 GAAAAACCAAAACATCAAAGAAACCTA 57.843 29.630 0.00 0.00 0.00 3.08
289 290 9.508642 AAAAACCAAAACATCAAAGAAACCTAA 57.491 25.926 0.00 0.00 0.00 2.69
290 291 9.508642 AAAACCAAAACATCAAAGAAACCTAAA 57.491 25.926 0.00 0.00 0.00 1.85
291 292 9.508642 AAACCAAAACATCAAAGAAACCTAAAA 57.491 25.926 0.00 0.00 0.00 1.52
292 293 9.508642 AACCAAAACATCAAAGAAACCTAAAAA 57.491 25.926 0.00 0.00 0.00 1.94
313 314 6.477669 AAAAACCGTTTAAAAAGCCGAAAA 57.522 29.167 0.00 0.00 0.00 2.29
314 315 5.453281 AAACCGTTTAAAAAGCCGAAAAC 57.547 34.783 0.00 0.00 0.00 2.43
316 317 3.130797 CGTTTAAAAAGCCGAAAACGC 57.869 42.857 6.30 0.00 44.94 4.84
317 318 2.406245 CGTTTAAAAAGCCGAAAACGCG 60.406 45.455 3.53 3.53 44.94 6.01
318 319 2.471862 TTAAAAAGCCGAAAACGCGT 57.528 40.000 5.58 5.58 0.00 6.01
319 320 1.744374 TAAAAAGCCGAAAACGCGTG 58.256 45.000 14.98 0.00 0.00 5.34
320 321 1.476235 AAAAAGCCGAAAACGCGTGC 61.476 50.000 14.98 12.13 0.00 5.34
321 322 4.659874 AAGCCGAAAACGCGTGCG 62.660 61.111 14.98 17.33 46.03 5.34
323 324 4.653252 GCCGAAAACGCGTGCGAA 62.653 61.111 24.61 0.00 42.83 4.70
324 325 2.052941 CCGAAAACGCGTGCGAAA 60.053 55.556 24.61 0.00 42.83 3.46
325 326 1.651730 CCGAAAACGCGTGCGAAAA 60.652 52.632 24.61 0.00 42.83 2.29
326 327 1.194896 CCGAAAACGCGTGCGAAAAA 61.195 50.000 24.61 0.00 42.83 1.94
351 352 3.522731 CGGAGGGAGCGTCCAGAG 61.523 72.222 6.41 0.00 38.64 3.35
352 353 3.844090 GGAGGGAGCGTCCAGAGC 61.844 72.222 6.41 0.00 38.64 4.09
353 354 4.200283 GAGGGAGCGTCCAGAGCG 62.200 72.222 6.41 0.00 38.64 5.03
361 362 4.702081 GTCCAGAGCGCGACACGT 62.702 66.667 12.10 0.00 46.11 4.49
362 363 4.700365 TCCAGAGCGCGACACGTG 62.700 66.667 15.48 15.48 46.11 4.49
372 373 2.742372 GACACGTGGCGAATGGCT 60.742 61.111 21.57 0.00 42.94 4.75
373 374 3.027170 GACACGTGGCGAATGGCTG 62.027 63.158 21.57 0.00 42.94 4.85
374 375 2.741985 CACGTGGCGAATGGCTGA 60.742 61.111 7.95 0.00 42.94 4.26
375 376 2.108514 CACGTGGCGAATGGCTGAT 61.109 57.895 7.95 0.00 42.94 2.90
376 377 1.815421 ACGTGGCGAATGGCTGATC 60.815 57.895 0.00 0.00 42.94 2.92
377 378 2.874694 CGTGGCGAATGGCTGATCG 61.875 63.158 0.00 3.41 42.94 3.69
378 379 1.815421 GTGGCGAATGGCTGATCGT 60.815 57.895 8.45 0.00 42.94 3.73
379 380 1.078497 TGGCGAATGGCTGATCGTT 60.078 52.632 8.45 0.00 42.94 3.85
380 381 1.353103 GGCGAATGGCTGATCGTTG 59.647 57.895 8.45 0.00 42.94 4.10
381 382 1.297893 GCGAATGGCTGATCGTTGC 60.298 57.895 8.45 0.00 41.01 4.17
382 383 1.011904 CGAATGGCTGATCGTTGCG 60.012 57.895 0.00 0.00 34.48 4.85
383 384 1.420641 CGAATGGCTGATCGTTGCGA 61.421 55.000 0.00 0.00 41.13 5.10
384 385 0.302890 GAATGGCTGATCGTTGCGAG 59.697 55.000 0.00 0.00 39.91 5.03
385 386 1.091771 AATGGCTGATCGTTGCGAGG 61.092 55.000 0.00 0.00 39.91 4.63
386 387 3.567797 GGCTGATCGTTGCGAGGC 61.568 66.667 0.00 2.18 39.91 4.70
387 388 2.510238 GCTGATCGTTGCGAGGCT 60.510 61.111 0.00 0.00 39.91 4.58
388 389 2.520904 GCTGATCGTTGCGAGGCTC 61.521 63.158 3.87 3.87 39.91 4.70
389 390 1.880340 CTGATCGTTGCGAGGCTCC 60.880 63.158 9.32 2.37 39.91 4.70
390 391 2.586357 GATCGTTGCGAGGCTCCC 60.586 66.667 9.32 0.00 39.91 4.30
391 392 4.514577 ATCGTTGCGAGGCTCCCG 62.515 66.667 9.32 6.56 39.91 5.14
393 394 4.735132 CGTTGCGAGGCTCCCGAA 62.735 66.667 9.32 0.00 0.00 4.30
394 395 2.815647 GTTGCGAGGCTCCCGAAG 60.816 66.667 9.32 0.00 0.00 3.79
407 408 4.470876 CGAAGGAGCGCTCGTTAA 57.529 55.556 36.96 0.00 37.75 2.01
408 409 1.989163 CGAAGGAGCGCTCGTTAAC 59.011 57.895 36.96 26.47 37.75 2.01
409 410 0.456312 CGAAGGAGCGCTCGTTAACT 60.456 55.000 36.96 23.16 37.75 2.24
410 411 1.202110 CGAAGGAGCGCTCGTTAACTA 60.202 52.381 36.96 0.00 37.75 2.24
411 412 2.452105 GAAGGAGCGCTCGTTAACTAG 58.548 52.381 36.96 3.24 37.75 2.57
412 413 1.461559 AGGAGCGCTCGTTAACTAGT 58.538 50.000 29.81 3.95 0.00 2.57
413 414 1.817447 AGGAGCGCTCGTTAACTAGTT 59.183 47.619 29.81 13.68 0.00 2.24
414 415 1.918609 GGAGCGCTCGTTAACTAGTTG 59.081 52.381 29.81 1.62 0.00 3.16
415 416 1.320852 GAGCGCTCGTTAACTAGTTGC 59.679 52.381 23.61 11.18 0.00 4.17
416 417 1.067776 AGCGCTCGTTAACTAGTTGCT 60.068 47.619 18.56 17.34 0.00 3.91
417 418 1.320852 GCGCTCGTTAACTAGTTGCTC 59.679 52.381 18.56 3.86 0.00 4.26
418 419 2.864968 CGCTCGTTAACTAGTTGCTCT 58.135 47.619 18.56 0.00 0.00 4.09
419 420 2.847133 CGCTCGTTAACTAGTTGCTCTC 59.153 50.000 18.56 2.53 0.00 3.20
420 421 3.669824 CGCTCGTTAACTAGTTGCTCTCA 60.670 47.826 18.56 0.00 0.00 3.27
421 422 4.425520 GCTCGTTAACTAGTTGCTCTCAT 58.574 43.478 18.56 0.00 0.00 2.90
422 423 5.579718 GCTCGTTAACTAGTTGCTCTCATA 58.420 41.667 18.56 0.00 0.00 2.15
423 424 6.034591 GCTCGTTAACTAGTTGCTCTCATAA 58.965 40.000 18.56 0.00 0.00 1.90
424 425 6.697892 GCTCGTTAACTAGTTGCTCTCATAAT 59.302 38.462 18.56 0.00 0.00 1.28
425 426 7.861372 GCTCGTTAACTAGTTGCTCTCATAATA 59.139 37.037 18.56 0.00 0.00 0.98
426 427 9.900710 CTCGTTAACTAGTTGCTCTCATAATAT 57.099 33.333 18.56 0.00 0.00 1.28
483 484 8.848474 AAACAATCTTATATTATGGGACGGAG 57.152 34.615 0.00 0.00 0.00 4.63
485 486 6.500751 ACAATCTTATATTATGGGACGGAGGT 59.499 38.462 0.00 0.00 0.00 3.85
491 492 6.847421 ATATTATGGGACGGAGGTAGTAAC 57.153 41.667 0.00 0.00 0.00 2.50
505 506 7.046652 GGAGGTAGTAACAATTAAGGGAACTC 58.953 42.308 0.00 0.00 42.68 3.01
523 524 4.657814 ACTCCTCATTAGAAAAGGCCAA 57.342 40.909 5.01 0.00 0.00 4.52
575 576 8.816640 TCCATTTTCTTCTAGCATTTTGTTTC 57.183 30.769 0.00 0.00 0.00 2.78
597 598 6.325919 TCTTTGGTCAAATGTGTGGATTAC 57.674 37.500 0.00 0.00 0.00 1.89
845 872 3.517612 ACACACTACACATACTCCCCTT 58.482 45.455 0.00 0.00 0.00 3.95
848 876 2.434702 CACTACACATACTCCCCTTCCC 59.565 54.545 0.00 0.00 0.00 3.97
849 877 2.318207 ACTACACATACTCCCCTTCCCT 59.682 50.000 0.00 0.00 0.00 4.20
850 878 1.584724 ACACATACTCCCCTTCCCTG 58.415 55.000 0.00 0.00 0.00 4.45
851 879 1.203440 ACACATACTCCCCTTCCCTGT 60.203 52.381 0.00 0.00 0.00 4.00
852 880 1.916181 CACATACTCCCCTTCCCTGTT 59.084 52.381 0.00 0.00 0.00 3.16
854 882 2.993863 ACATACTCCCCTTCCCTGTTTT 59.006 45.455 0.00 0.00 0.00 2.43
855 883 3.010250 ACATACTCCCCTTCCCTGTTTTC 59.990 47.826 0.00 0.00 0.00 2.29
868 918 2.095372 CCTGTTTTCTTTATCCCGCGTC 59.905 50.000 4.92 0.00 0.00 5.19
919 969 4.064768 CCATTCCCTGCCCTGCCA 62.065 66.667 0.00 0.00 0.00 4.92
920 970 2.441532 CATTCCCTGCCCTGCCAG 60.442 66.667 0.00 0.00 0.00 4.85
921 971 2.943265 ATTCCCTGCCCTGCCAGT 60.943 61.111 0.00 0.00 0.00 4.00
922 972 3.292481 ATTCCCTGCCCTGCCAGTG 62.292 63.158 0.00 0.00 0.00 3.66
930 980 4.463879 CCTGCCAGTGCCGGAGAG 62.464 72.222 5.05 0.00 44.04 3.20
931 981 3.385384 CTGCCAGTGCCGGAGAGA 61.385 66.667 5.05 0.00 36.33 3.10
932 982 3.368190 CTGCCAGTGCCGGAGAGAG 62.368 68.421 5.05 0.00 36.33 3.20
933 983 4.828925 GCCAGTGCCGGAGAGAGC 62.829 72.222 5.05 0.00 0.00 4.09
934 984 3.385384 CCAGTGCCGGAGAGAGCA 61.385 66.667 5.05 0.00 36.44 4.26
935 985 2.659016 CAGTGCCGGAGAGAGCAA 59.341 61.111 5.05 0.00 41.48 3.91
936 986 1.447489 CAGTGCCGGAGAGAGCAAG 60.447 63.158 5.05 0.00 41.48 4.01
937 987 1.607756 AGTGCCGGAGAGAGCAAGA 60.608 57.895 5.05 0.00 41.48 3.02
938 988 1.188219 AGTGCCGGAGAGAGCAAGAA 61.188 55.000 5.05 0.00 41.48 2.52
939 989 0.739112 GTGCCGGAGAGAGCAAGAAG 60.739 60.000 5.05 0.00 41.48 2.85
940 990 1.813337 GCCGGAGAGAGCAAGAAGC 60.813 63.158 5.05 0.00 46.19 3.86
957 1023 0.603975 AGCCCAAGAACGAAGCTCAC 60.604 55.000 0.00 0.00 0.00 3.51
974 1040 1.409064 TCACTTGGAAGGATCGATCGG 59.591 52.381 18.81 5.75 0.00 4.18
979 1049 1.371881 GAAGGATCGATCGGCCGAC 60.372 63.158 33.75 22.59 41.70 4.79
980 1050 2.750715 GAAGGATCGATCGGCCGACC 62.751 65.000 33.75 26.36 41.70 4.79
1177 1256 6.466308 TCAACATGAGTAAGTGTTTCATCG 57.534 37.500 0.00 0.00 36.48 3.84
1203 1284 1.064621 CCGCCAAATCAATGGAGCG 59.935 57.895 0.00 0.00 43.54 5.03
1229 1310 6.730038 AGTAGCTTATGATCTCATCCATCCTT 59.270 38.462 0.00 0.00 37.76 3.36
1357 2686 4.154347 GAGGCCCTCGACCAGCTG 62.154 72.222 6.78 6.78 0.00 4.24
1381 2710 3.064324 ATCTGCAAAGCCCACCGC 61.064 61.111 0.00 0.00 37.98 5.68
1413 2745 3.508845 TCCTTCCTTCCTTTGTTCAGG 57.491 47.619 0.00 0.00 34.86 3.86
1417 2749 4.041691 CCTTCCTTCCTTTGTTCAGGAGTA 59.958 45.833 0.00 0.00 44.18 2.59
1467 2801 5.400066 TCAACTGATTGAACCATCGAGTA 57.600 39.130 0.00 0.00 41.99 2.59
1482 2872 6.984474 ACCATCGAGTACAATAATTACAGGTG 59.016 38.462 0.00 0.00 0.00 4.00
1483 2873 6.423905 CCATCGAGTACAATAATTACAGGTGG 59.576 42.308 0.00 0.00 29.89 4.61
1503 2893 4.210304 GCGCGCAAGGTCATCGTC 62.210 66.667 29.10 0.00 38.28 4.20
1642 3133 0.729816 GAGTTCAGACGTCGCAGTCC 60.730 60.000 10.46 0.00 41.83 3.85
1694 3299 2.760634 TGTGATGGATGCTACGTTGT 57.239 45.000 0.00 0.00 0.00 3.32
1755 3360 3.429141 CGTGCAGCTCAAGGCCAG 61.429 66.667 5.01 0.00 43.05 4.85
1810 3415 3.201290 CAAGCTTATCTGCACCAGGTAG 58.799 50.000 0.00 0.00 28.21 3.18
1829 3434 7.944414 AGGTAGGTACTCTATCTGGTTAGTA 57.056 40.000 4.04 0.00 37.98 1.82
1831 3436 8.384718 AGGTAGGTACTCTATCTGGTTAGTATG 58.615 40.741 4.04 0.00 37.98 2.39
1832 3437 8.162746 GGTAGGTACTCTATCTGGTTAGTATGT 58.837 40.741 0.00 0.00 41.75 2.29
1835 5331 9.742144 AGGTACTCTATCTGGTTAGTATGTATG 57.258 37.037 0.00 0.00 0.00 2.39
1853 5354 6.053632 TGTATGACACAGTCTCAATGGATT 57.946 37.500 0.00 0.00 33.15 3.01
1880 5381 4.067896 GCTGTCCATTTATCCGATGATGT 58.932 43.478 0.00 0.00 32.18 3.06
1883 5384 4.275689 TGTCCATTTATCCGATGATGTTGC 59.724 41.667 0.00 0.00 32.18 4.17
1912 5416 1.139947 GTACAGAGAGGCCAGCGAC 59.860 63.158 5.01 0.00 0.00 5.19
2051 5729 2.748647 TCGGCATCCACGACTCGA 60.749 61.111 5.20 0.00 35.12 4.04
2062 5740 3.371063 GACTCGACCACGCCCTCA 61.371 66.667 0.00 0.00 39.58 3.86
2095 5776 2.546368 GGTACGTGCAAGAACAATGTGA 59.454 45.455 6.65 0.00 0.00 3.58
2097 5778 2.288666 ACGTGCAAGAACAATGTGACT 58.711 42.857 6.65 0.00 0.00 3.41
2099 5780 3.128589 ACGTGCAAGAACAATGTGACTTT 59.871 39.130 6.65 0.00 0.00 2.66
2120 5812 3.008835 AGTGGGATCATCCATTGTGTG 57.991 47.619 5.89 0.00 38.64 3.82
2121 5813 2.577563 AGTGGGATCATCCATTGTGTGA 59.422 45.455 5.89 0.00 38.64 3.58
2123 5815 2.845586 TGGGATCATCCATTGTGTGAGA 59.154 45.455 5.89 0.00 38.64 3.27
2124 5816 3.460712 TGGGATCATCCATTGTGTGAGAT 59.539 43.478 5.89 0.00 38.64 2.75
2125 5817 4.659835 TGGGATCATCCATTGTGTGAGATA 59.340 41.667 5.89 0.00 38.64 1.98
2130 5822 7.763528 GGATCATCCATTGTGTGAGATAGATAC 59.236 40.741 0.00 0.00 36.28 2.24
2133 5825 8.654094 TCATCCATTGTGTGAGATAGATACATT 58.346 33.333 0.00 0.00 0.00 2.71
2137 5829 7.095899 CCATTGTGTGAGATAGATACATTGTCG 60.096 40.741 0.00 0.00 0.00 4.35
2159 5851 1.381165 GGGTGGTGAACAGTGCGTTT 61.381 55.000 0.00 0.00 38.19 3.60
2200 5989 0.319040 CGCGATGGAGATGGACGATT 60.319 55.000 0.00 0.00 0.00 3.34
2205 5994 2.579207 TGGAGATGGACGATTCGTTC 57.421 50.000 13.72 12.13 41.37 3.95
2237 6074 4.516195 GGCCGAAGAGACTCGCCC 62.516 72.222 7.65 0.00 37.51 6.13
2246 6483 4.373116 GACTCGCCCGCAACCTGA 62.373 66.667 0.00 0.00 0.00 3.86
2252 6489 2.281761 CCCGCAACCTGAAGCTGT 60.282 61.111 0.00 0.00 0.00 4.40
2291 6531 0.464373 ACGGATGGTGATCATGGTGC 60.464 55.000 0.00 0.00 35.97 5.01
2616 6859 4.148825 CAAGGAGGCGAGGGGACG 62.149 72.222 0.00 0.00 0.00 4.79
3264 7535 1.742768 GCCCGTCCTACATCCTCTG 59.257 63.158 0.00 0.00 0.00 3.35
3267 7538 1.043116 CCGTCCTACATCCTCTGCCA 61.043 60.000 0.00 0.00 0.00 4.92
3274 7545 4.529769 TCCTACATCCTCTGCCAGATAATG 59.470 45.833 12.47 12.47 0.00 1.90
3289 7560 8.613923 TGCCAGATAATGAGGATCCAAATAATA 58.386 33.333 15.82 0.00 0.00 0.98
3290 7561 9.466497 GCCAGATAATGAGGATCCAAATAATAA 57.534 33.333 15.82 0.00 0.00 1.40
3303 7574 6.980593 TCCAAATAATAATATGTGTGCCAGC 58.019 36.000 0.00 0.00 0.00 4.85
3318 7589 3.247648 AGCAGCAGCAGGTCCACT 61.248 61.111 3.17 0.00 45.49 4.00
3330 7601 3.958798 GCAGGTCCACTAGGTAGTTGATA 59.041 47.826 0.00 0.00 33.46 2.15
3339 7610 8.057011 TCCACTAGGTAGTTGATACATCTGTAA 58.943 37.037 0.00 0.00 35.96 2.41
3349 7620 8.896744 AGTTGATACATCTGTAACCAATGATTG 58.103 33.333 0.00 0.00 33.76 2.67
3364 7635 5.870978 CCAATGATTGTTTTGAGATGGGAAC 59.129 40.000 4.27 0.00 0.00 3.62
3368 7639 6.176896 TGATTGTTTTGAGATGGGAACGATA 58.823 36.000 0.00 0.00 0.00 2.92
3375 7646 4.948847 TGAGATGGGAACGATATGTTGAG 58.051 43.478 0.00 0.00 42.09 3.02
3376 7647 4.202253 TGAGATGGGAACGATATGTTGAGG 60.202 45.833 0.00 0.00 42.09 3.86
3377 7648 3.711704 AGATGGGAACGATATGTTGAGGT 59.288 43.478 0.00 0.00 42.09 3.85
3378 7649 4.899457 AGATGGGAACGATATGTTGAGGTA 59.101 41.667 0.00 0.00 42.09 3.08
3379 7650 4.395959 TGGGAACGATATGTTGAGGTAC 57.604 45.455 0.00 0.00 42.09 3.34
3394 7665 0.037975 GGTACGGTGGTGGTGTGTAG 60.038 60.000 0.00 0.00 0.00 2.74
3414 7685 0.969894 CGTTCCACTCCTCTCAGGTT 59.030 55.000 0.00 0.00 36.53 3.50
3418 7689 0.610687 CCACTCCTCTCAGGTTGACC 59.389 60.000 0.00 0.00 36.53 4.02
3419 7690 0.244994 CACTCCTCTCAGGTTGACCG 59.755 60.000 0.00 0.00 42.08 4.79
3420 7691 0.178958 ACTCCTCTCAGGTTGACCGT 60.179 55.000 0.00 0.00 42.08 4.83
3421 7692 0.528470 CTCCTCTCAGGTTGACCGTC 59.472 60.000 0.00 0.00 42.08 4.79
3422 7693 0.178973 TCCTCTCAGGTTGACCGTCA 60.179 55.000 0.00 0.00 42.08 4.35
3423 7694 0.038159 CCTCTCAGGTTGACCGTCAC 60.038 60.000 0.00 0.00 42.08 3.67
3424 7695 0.673985 CTCTCAGGTTGACCGTCACA 59.326 55.000 0.00 0.00 42.08 3.58
3425 7696 0.673985 TCTCAGGTTGACCGTCACAG 59.326 55.000 0.00 0.00 42.08 3.66
3426 7697 0.319900 CTCAGGTTGACCGTCACAGG 60.320 60.000 0.00 0.00 42.08 4.00
3427 7698 1.961277 CAGGTTGACCGTCACAGGC 60.961 63.158 0.00 0.00 42.08 4.85
3428 7699 2.110213 GGTTGACCGTCACAGGCA 59.890 61.111 0.00 0.00 33.69 4.75
3429 7700 2.251642 GGTTGACCGTCACAGGCAC 61.252 63.158 0.00 0.00 33.69 5.01
3430 7701 1.522806 GTTGACCGTCACAGGCACA 60.523 57.895 0.00 0.00 33.69 4.57
3431 7702 1.227527 TTGACCGTCACAGGCACAG 60.228 57.895 0.00 0.00 33.69 3.66
3432 7703 2.357517 GACCGTCACAGGCACAGG 60.358 66.667 0.00 0.00 33.69 4.00
3433 7704 2.842462 ACCGTCACAGGCACAGGA 60.842 61.111 0.00 0.00 33.69 3.86
3434 7705 2.377628 GACCGTCACAGGCACAGGAA 62.378 60.000 0.00 0.00 33.69 3.36
3435 7706 1.961277 CCGTCACAGGCACAGGAAC 60.961 63.158 0.00 0.00 0.00 3.62
3436 7707 1.227527 CGTCACAGGCACAGGAACA 60.228 57.895 0.00 0.00 0.00 3.18
3437 7708 1.498865 CGTCACAGGCACAGGAACAC 61.499 60.000 0.00 0.00 0.00 3.32
3438 7709 0.463654 GTCACAGGCACAGGAACACA 60.464 55.000 0.00 0.00 0.00 3.72
3439 7710 0.463654 TCACAGGCACAGGAACACAC 60.464 55.000 0.00 0.00 0.00 3.82
3440 7711 0.464373 CACAGGCACAGGAACACACT 60.464 55.000 0.00 0.00 0.00 3.55
3441 7712 1.128200 ACAGGCACAGGAACACACTA 58.872 50.000 0.00 0.00 0.00 2.74
3442 7713 1.070758 ACAGGCACAGGAACACACTAG 59.929 52.381 0.00 0.00 0.00 2.57
3443 7714 1.070758 CAGGCACAGGAACACACTAGT 59.929 52.381 0.00 0.00 0.00 2.57
3444 7715 1.768870 AGGCACAGGAACACACTAGTT 59.231 47.619 0.00 0.00 0.00 2.24
3445 7716 2.969950 AGGCACAGGAACACACTAGTTA 59.030 45.455 0.00 0.00 0.00 2.24
3446 7717 3.006967 AGGCACAGGAACACACTAGTTAG 59.993 47.826 0.00 0.00 0.00 2.34
3447 7718 3.244112 GGCACAGGAACACACTAGTTAGT 60.244 47.826 0.00 0.00 36.90 2.24
3448 7719 4.377897 GCACAGGAACACACTAGTTAGTT 58.622 43.478 8.94 8.94 33.46 2.24
3449 7720 5.510179 GGCACAGGAACACACTAGTTAGTTA 60.510 44.000 9.12 0.00 33.46 2.24
3450 7721 5.634020 GCACAGGAACACACTAGTTAGTTAG 59.366 44.000 9.12 6.15 33.46 2.34
3451 7722 6.737899 GCACAGGAACACACTAGTTAGTTAGT 60.738 42.308 9.12 6.63 33.46 2.24
3459 7730 4.543692 CACTAGTTAGTTAGTGTGCACGT 58.456 43.478 13.13 4.41 43.48 4.49
3460 7731 4.381863 CACTAGTTAGTTAGTGTGCACGTG 59.618 45.833 12.28 12.28 43.48 4.49
3461 7732 3.720949 AGTTAGTTAGTGTGCACGTGA 57.279 42.857 22.23 1.04 36.20 4.35
3462 7733 4.049546 AGTTAGTTAGTGTGCACGTGAA 57.950 40.909 22.23 5.66 36.20 3.18
3463 7734 4.628074 AGTTAGTTAGTGTGCACGTGAAT 58.372 39.130 22.23 0.00 36.20 2.57
3464 7735 4.684703 AGTTAGTTAGTGTGCACGTGAATC 59.315 41.667 22.23 6.66 36.20 2.52
3465 7736 2.058798 AGTTAGTGTGCACGTGAATCG 58.941 47.619 22.23 0.00 46.00 3.34
3466 7737 2.055838 GTTAGTGTGCACGTGAATCGA 58.944 47.619 22.23 0.00 42.86 3.59
3467 7738 2.647529 TAGTGTGCACGTGAATCGAT 57.352 45.000 22.23 2.14 42.86 3.59
3468 7739 1.795768 AGTGTGCACGTGAATCGATT 58.204 45.000 22.23 11.20 42.86 3.34
3469 7740 1.460743 AGTGTGCACGTGAATCGATTG 59.539 47.619 22.23 3.73 42.86 2.67
3470 7741 0.795698 TGTGCACGTGAATCGATTGG 59.204 50.000 22.23 7.12 42.86 3.16
3471 7742 0.796312 GTGCACGTGAATCGATTGGT 59.204 50.000 22.23 7.78 42.86 3.67
3472 7743 1.996898 GTGCACGTGAATCGATTGGTA 59.003 47.619 22.23 0.00 42.86 3.25
3473 7744 1.996898 TGCACGTGAATCGATTGGTAC 59.003 47.619 22.23 10.58 42.86 3.34
3474 7745 1.996898 GCACGTGAATCGATTGGTACA 59.003 47.619 22.23 4.12 42.86 2.90
3475 7746 2.607635 GCACGTGAATCGATTGGTACAT 59.392 45.455 22.23 0.00 42.86 2.29
3476 7747 3.302480 GCACGTGAATCGATTGGTACATC 60.302 47.826 22.23 0.00 42.86 3.06
3477 7748 3.245284 CACGTGAATCGATTGGTACATCC 59.755 47.826 16.96 0.00 42.86 3.51
3478 7749 3.118920 ACGTGAATCGATTGGTACATCCA 60.119 43.478 16.96 1.33 42.69 3.41
3479 7750 3.245284 CGTGAATCGATTGGTACATCCAC 59.755 47.826 16.96 13.01 43.52 4.02
3480 7751 5.208109 CGTGAATCGATTGGTACATCCACA 61.208 45.833 16.96 0.00 43.52 4.17
3481 7752 6.642694 CGTGAATCGATTGGTACATCCACAA 61.643 44.000 16.96 0.00 43.52 3.33
3482 7753 7.885441 CGTGAATCGATTGGTACATCCACAAT 61.885 42.308 16.96 0.00 43.52 2.71
3483 7754 9.556618 CGTGAATCGATTGGTACATCCACAATC 62.557 44.444 16.96 10.19 43.52 2.67
3488 7759 3.912496 TGGTACATCCACAATCTCTGG 57.088 47.619 0.00 0.00 41.93 3.86
3489 7760 3.449918 TGGTACATCCACAATCTCTGGA 58.550 45.455 0.00 0.00 41.93 3.86
3494 7765 0.548031 TCCACAATCTCTGGATGGGC 59.452 55.000 0.00 0.00 32.52 5.36
3501 7772 4.414846 ACAATCTCTGGATGGGCTAATCTT 59.585 41.667 1.72 0.00 31.75 2.40
3507 7778 6.495181 TCTCTGGATGGGCTAATCTTTACTAG 59.505 42.308 0.00 0.00 0.00 2.57
3554 7846 1.616865 TCGACCACCTTGTTCGATTCT 59.383 47.619 0.00 0.00 0.00 2.40
3576 7963 0.326927 GGTTCCACCCCTCGATCAAA 59.673 55.000 0.00 0.00 30.04 2.69
3577 7964 1.064685 GGTTCCACCCCTCGATCAAAT 60.065 52.381 0.00 0.00 30.04 2.32
4256 12363 3.809013 GATGGCGGGGTGATGGGT 61.809 66.667 0.00 0.00 0.00 4.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.258591 GGTTGTGCTCTCGCGAGA 59.741 61.111 34.65 34.65 39.74 4.04
22 23 3.175240 CGGTTGTGCTCTCGCGAG 61.175 66.667 30.03 30.03 39.65 5.03
23 24 3.973516 ACGGTTGTGCTCTCGCGA 61.974 61.111 9.26 9.26 39.65 5.87
24 25 3.767230 CACGGTTGTGCTCTCGCG 61.767 66.667 0.00 0.00 39.67 5.87
42 43 1.497722 GTTTTGCTTCCGCGAGAGG 59.502 57.895 8.23 4.88 39.65 3.69
43 44 1.497722 GGTTTTGCTTCCGCGAGAG 59.502 57.895 8.23 5.93 39.65 3.20
44 45 2.314647 CGGTTTTGCTTCCGCGAGA 61.315 57.895 8.23 0.00 40.28 4.04
45 46 2.173382 CGGTTTTGCTTCCGCGAG 59.827 61.111 8.23 0.00 40.28 5.03
50 51 1.531578 GAGAGTCACGGTTTTGCTTCC 59.468 52.381 0.00 0.00 0.00 3.46
51 52 1.192534 CGAGAGTCACGGTTTTGCTTC 59.807 52.381 1.62 0.00 0.00 3.86
52 53 1.217882 CGAGAGTCACGGTTTTGCTT 58.782 50.000 1.62 0.00 0.00 3.91
53 54 1.222115 GCGAGAGTCACGGTTTTGCT 61.222 55.000 11.95 0.00 0.00 3.91
54 55 1.204312 GCGAGAGTCACGGTTTTGC 59.796 57.895 11.95 0.00 0.00 3.68
55 56 0.937699 TCGCGAGAGTCACGGTTTTG 60.938 55.000 3.71 0.00 34.84 2.44
56 57 0.249155 TTCGCGAGAGTCACGGTTTT 60.249 50.000 9.59 0.00 43.69 2.43
57 58 0.249155 TTTCGCGAGAGTCACGGTTT 60.249 50.000 9.59 0.00 43.69 3.27
58 59 0.663568 CTTTCGCGAGAGTCACGGTT 60.664 55.000 17.92 0.00 43.69 4.44
59 60 1.081376 CTTTCGCGAGAGTCACGGT 60.081 57.895 17.92 0.00 43.69 4.83
60 61 0.386858 TTCTTTCGCGAGAGTCACGG 60.387 55.000 24.05 0.86 43.69 4.94
61 62 1.405461 TTTCTTTCGCGAGAGTCACG 58.595 50.000 24.05 5.53 43.69 4.35
62 63 3.854286 TTTTTCTTTCGCGAGAGTCAC 57.146 42.857 24.05 0.00 43.69 3.67
83 84 4.150274 GGACAAAAACGTGTTTTTCGGTTT 59.850 37.500 17.90 0.00 46.30 3.27
84 85 3.674281 GGACAAAAACGTGTTTTTCGGTT 59.326 39.130 17.90 5.79 46.30 4.44
85 86 3.244156 GGACAAAAACGTGTTTTTCGGT 58.756 40.909 17.90 14.40 46.30 4.69
86 87 2.276798 CGGACAAAAACGTGTTTTTCGG 59.723 45.455 17.90 10.03 46.30 4.30
87 88 2.909863 ACGGACAAAAACGTGTTTTTCG 59.090 40.909 17.90 19.03 46.30 3.46
88 89 4.889519 AACGGACAAAAACGTGTTTTTC 57.110 36.364 17.90 8.57 46.30 2.29
90 91 4.143577 CGAAAACGGACAAAAACGTGTTTT 60.144 37.500 0.00 4.95 40.32 2.43
91 92 3.361348 CGAAAACGGACAAAAACGTGTTT 59.639 39.130 0.00 0.00 40.32 2.83
92 93 2.909863 CGAAAACGGACAAAAACGTGTT 59.090 40.909 0.00 0.00 42.67 3.32
93 94 2.159234 TCGAAAACGGACAAAAACGTGT 59.841 40.909 0.00 0.00 43.31 4.49
94 95 2.771689 TCGAAAACGGACAAAAACGTG 58.228 42.857 0.00 0.00 43.31 4.49
95 96 3.468304 TTCGAAAACGGACAAAAACGT 57.532 38.095 0.00 0.00 46.48 3.99
96 97 3.238798 CCTTTCGAAAACGGACAAAAACG 59.761 43.478 12.41 0.00 0.00 3.60
97 98 3.000476 GCCTTTCGAAAACGGACAAAAAC 60.000 43.478 17.80 0.00 0.00 2.43
98 99 3.180613 GCCTTTCGAAAACGGACAAAAA 58.819 40.909 17.80 0.00 0.00 1.94
99 100 2.163815 TGCCTTTCGAAAACGGACAAAA 59.836 40.909 17.80 0.00 0.00 2.44
100 101 1.743958 TGCCTTTCGAAAACGGACAAA 59.256 42.857 17.80 0.42 0.00 2.83
101 102 1.064357 GTGCCTTTCGAAAACGGACAA 59.936 47.619 17.80 2.51 0.00 3.18
102 103 0.658897 GTGCCTTTCGAAAACGGACA 59.341 50.000 17.80 12.52 0.00 4.02
103 104 0.383860 CGTGCCTTTCGAAAACGGAC 60.384 55.000 20.48 17.78 0.00 4.79
104 105 1.935925 CGTGCCTTTCGAAAACGGA 59.064 52.632 20.48 9.52 0.00 4.69
105 106 1.082366 CCGTGCCTTTCGAAAACGG 60.082 57.895 28.34 28.34 46.69 4.44
106 107 1.724581 GCCGTGCCTTTCGAAAACG 60.725 57.895 21.03 21.03 0.00 3.60
107 108 1.371267 GGCCGTGCCTTTCGAAAAC 60.371 57.895 12.41 6.59 46.69 2.43
108 109 3.035727 GGCCGTGCCTTTCGAAAA 58.964 55.556 12.41 0.00 46.69 2.29
121 122 2.537792 TTTAGCGAGAGTCACGGCCG 62.538 60.000 26.86 26.86 0.00 6.13
122 123 0.802607 CTTTAGCGAGAGTCACGGCC 60.803 60.000 11.95 0.00 0.00 6.13
123 124 1.414527 GCTTTAGCGAGAGTCACGGC 61.415 60.000 11.95 2.56 0.00 5.68
124 125 0.109272 TGCTTTAGCGAGAGTCACGG 60.109 55.000 11.95 0.00 45.83 4.94
125 126 0.985549 GTGCTTTAGCGAGAGTCACG 59.014 55.000 5.53 5.53 45.83 4.35
126 127 2.065993 TGTGCTTTAGCGAGAGTCAC 57.934 50.000 0.00 5.49 45.83 3.67
127 128 2.404215 GTTGTGCTTTAGCGAGAGTCA 58.596 47.619 0.00 0.00 45.83 3.41
128 129 1.727335 GGTTGTGCTTTAGCGAGAGTC 59.273 52.381 0.00 0.00 45.83 3.36
129 130 1.797025 GGTTGTGCTTTAGCGAGAGT 58.203 50.000 0.00 0.00 45.83 3.24
130 131 0.716108 CGGTTGTGCTTTAGCGAGAG 59.284 55.000 0.00 0.00 45.83 3.20
131 132 0.032952 ACGGTTGTGCTTTAGCGAGA 59.967 50.000 10.18 0.00 45.83 4.04
132 133 0.163788 CACGGTTGTGCTTTAGCGAG 59.836 55.000 10.18 0.56 45.83 5.03
133 134 2.230892 CACGGTTGTGCTTTAGCGA 58.769 52.632 10.18 0.00 45.83 4.93
134 135 4.818417 CACGGTTGTGCTTTAGCG 57.182 55.556 0.00 0.00 45.83 4.26
152 153 0.163146 GGTTTTTCTTCCGCGAGACG 59.837 55.000 8.23 0.63 43.15 4.18
153 154 0.163146 CGGTTTTTCTTCCGCGAGAC 59.837 55.000 8.23 0.00 40.28 3.36
154 155 2.524300 CGGTTTTTCTTCCGCGAGA 58.476 52.632 8.23 0.00 40.28 4.04
160 161 3.614588 CGAAAGTCACGGTTTTTCTTCC 58.385 45.455 0.00 0.00 0.00 3.46
161 162 3.033873 GCGAAAGTCACGGTTTTTCTTC 58.966 45.455 0.00 0.00 0.00 2.87
162 163 2.538132 CGCGAAAGTCACGGTTTTTCTT 60.538 45.455 0.00 0.00 0.00 2.52
163 164 1.004292 CGCGAAAGTCACGGTTTTTCT 60.004 47.619 0.00 0.00 0.00 2.52
164 165 1.004715 TCGCGAAAGTCACGGTTTTTC 60.005 47.619 6.20 0.00 0.00 2.29
165 166 1.008329 TCGCGAAAGTCACGGTTTTT 58.992 45.000 6.20 0.00 0.00 1.94
166 167 1.008329 TTCGCGAAAGTCACGGTTTT 58.992 45.000 21.14 0.00 0.00 2.43
167 168 1.004292 CTTTCGCGAAAGTCACGGTTT 60.004 47.619 40.16 0.00 42.02 3.27
168 169 0.580104 CTTTCGCGAAAGTCACGGTT 59.420 50.000 40.16 0.00 42.02 4.44
169 170 0.249155 TCTTTCGCGAAAGTCACGGT 60.249 50.000 43.49 0.00 45.88 4.83
170 171 0.856641 TTCTTTCGCGAAAGTCACGG 59.143 50.000 43.49 27.97 45.88 4.94
171 172 2.638628 TTTCTTTCGCGAAAGTCACG 57.361 45.000 43.49 28.57 45.88 4.35
233 234 7.360607 CGGTCTTTCTTAGCTTTCCGATAAAAA 60.361 37.037 0.00 0.00 39.17 1.94
234 235 6.091713 CGGTCTTTCTTAGCTTTCCGATAAAA 59.908 38.462 0.00 0.00 39.17 1.52
235 236 5.579511 CGGTCTTTCTTAGCTTTCCGATAAA 59.420 40.000 0.00 0.00 39.17 1.40
236 237 5.107133 CGGTCTTTCTTAGCTTTCCGATAA 58.893 41.667 0.00 0.00 39.17 1.75
237 238 4.441079 CCGGTCTTTCTTAGCTTTCCGATA 60.441 45.833 0.00 0.00 39.17 2.92
238 239 3.522553 CGGTCTTTCTTAGCTTTCCGAT 58.477 45.455 0.00 0.00 39.17 4.18
239 240 2.353406 CCGGTCTTTCTTAGCTTTCCGA 60.353 50.000 0.00 0.00 39.17 4.55
240 241 2.000447 CCGGTCTTTCTTAGCTTTCCG 59.000 52.381 0.00 0.00 37.04 4.30
241 242 2.357075 CCCGGTCTTTCTTAGCTTTCC 58.643 52.381 0.00 0.00 0.00 3.13
242 243 2.027469 TCCCCGGTCTTTCTTAGCTTTC 60.027 50.000 0.00 0.00 0.00 2.62
243 244 1.982958 TCCCCGGTCTTTCTTAGCTTT 59.017 47.619 0.00 0.00 0.00 3.51
244 245 1.652947 TCCCCGGTCTTTCTTAGCTT 58.347 50.000 0.00 0.00 0.00 3.74
245 246 1.652947 TTCCCCGGTCTTTCTTAGCT 58.347 50.000 0.00 0.00 0.00 3.32
246 247 2.484742 TTTCCCCGGTCTTTCTTAGC 57.515 50.000 0.00 0.00 0.00 3.09
247 248 3.504906 GGTTTTTCCCCGGTCTTTCTTAG 59.495 47.826 0.00 0.00 0.00 2.18
248 249 3.117587 TGGTTTTTCCCCGGTCTTTCTTA 60.118 43.478 0.00 0.00 34.77 2.10
249 250 2.313317 GGTTTTTCCCCGGTCTTTCTT 58.687 47.619 0.00 0.00 0.00 2.52
250 251 1.215924 TGGTTTTTCCCCGGTCTTTCT 59.784 47.619 0.00 0.00 34.77 2.52
251 252 1.694844 TGGTTTTTCCCCGGTCTTTC 58.305 50.000 0.00 0.00 34.77 2.62
252 253 2.162264 TTGGTTTTTCCCCGGTCTTT 57.838 45.000 0.00 0.00 34.77 2.52
253 254 2.162264 TTTGGTTTTTCCCCGGTCTT 57.838 45.000 0.00 0.00 34.77 3.01
254 255 1.758280 GTTTTGGTTTTTCCCCGGTCT 59.242 47.619 0.00 0.00 34.77 3.85
255 256 1.481363 TGTTTTGGTTTTTCCCCGGTC 59.519 47.619 0.00 0.00 34.77 4.79
256 257 1.569653 TGTTTTGGTTTTTCCCCGGT 58.430 45.000 0.00 0.00 34.77 5.28
257 258 2.103263 TGATGTTTTGGTTTTTCCCCGG 59.897 45.455 0.00 0.00 34.77 5.73
258 259 3.460857 TGATGTTTTGGTTTTTCCCCG 57.539 42.857 0.00 0.00 34.77 5.73
259 260 5.432645 TCTTTGATGTTTTGGTTTTTCCCC 58.567 37.500 0.00 0.00 34.77 4.81
260 261 6.993786 TTCTTTGATGTTTTGGTTTTTCCC 57.006 33.333 0.00 0.00 34.77 3.97
261 262 7.120579 AGGTTTCTTTGATGTTTTGGTTTTTCC 59.879 33.333 0.00 0.00 0.00 3.13
262 263 8.039603 AGGTTTCTTTGATGTTTTGGTTTTTC 57.960 30.769 0.00 0.00 0.00 2.29
263 264 7.994425 AGGTTTCTTTGATGTTTTGGTTTTT 57.006 28.000 0.00 0.00 0.00 1.94
264 265 9.508642 TTTAGGTTTCTTTGATGTTTTGGTTTT 57.491 25.926 0.00 0.00 0.00 2.43
265 266 9.508642 TTTTAGGTTTCTTTGATGTTTTGGTTT 57.491 25.926 0.00 0.00 0.00 3.27
266 267 9.508642 TTTTTAGGTTTCTTTGATGTTTTGGTT 57.491 25.926 0.00 0.00 0.00 3.67
290 291 6.305639 GTTTTCGGCTTTTTAAACGGTTTTT 58.694 32.000 11.87 0.00 0.00 1.94
291 292 5.444350 CGTTTTCGGCTTTTTAAACGGTTTT 60.444 36.000 11.87 0.00 45.26 2.43
292 293 4.031539 CGTTTTCGGCTTTTTAAACGGTTT 59.968 37.500 11.33 11.33 45.26 3.27
293 294 3.547068 CGTTTTCGGCTTTTTAAACGGTT 59.453 39.130 10.17 0.00 45.26 4.44
294 295 3.107407 CGTTTTCGGCTTTTTAAACGGT 58.893 40.909 10.17 0.00 45.26 4.83
295 296 3.739484 CGTTTTCGGCTTTTTAAACGG 57.261 42.857 10.17 0.00 45.26 4.44
297 298 2.531103 ACGCGTTTTCGGCTTTTTAAAC 59.469 40.909 5.58 0.00 44.29 2.01
298 299 2.530700 CACGCGTTTTCGGCTTTTTAAA 59.469 40.909 10.22 0.00 44.29 1.52
299 300 2.110226 CACGCGTTTTCGGCTTTTTAA 58.890 42.857 10.22 0.00 44.29 1.52
300 301 1.744374 CACGCGTTTTCGGCTTTTTA 58.256 45.000 10.22 0.00 44.29 1.52
301 302 1.476235 GCACGCGTTTTCGGCTTTTT 61.476 50.000 10.22 0.00 44.29 1.94
302 303 1.942223 GCACGCGTTTTCGGCTTTT 60.942 52.632 10.22 0.00 44.29 2.27
303 304 2.353030 GCACGCGTTTTCGGCTTT 60.353 55.556 10.22 0.00 44.29 3.51
304 305 4.659874 CGCACGCGTTTTCGGCTT 62.660 61.111 10.22 0.00 44.29 4.35
306 307 4.653252 TTCGCACGCGTTTTCGGC 62.653 61.111 10.22 9.05 44.29 5.54
307 308 1.194896 TTTTTCGCACGCGTTTTCGG 61.195 50.000 10.22 0.00 44.29 4.30
327 328 0.392595 GACGCTCCCTCCGGATTTTT 60.393 55.000 3.57 0.00 37.60 1.94
328 329 1.221021 GACGCTCCCTCCGGATTTT 59.779 57.895 3.57 0.00 37.60 1.82
329 330 2.732619 GGACGCTCCCTCCGGATTT 61.733 63.158 3.57 0.00 37.60 2.17
330 331 3.155167 GGACGCTCCCTCCGGATT 61.155 66.667 3.57 0.00 37.60 3.01
331 332 4.458829 TGGACGCTCCCTCCGGAT 62.459 66.667 3.57 0.00 37.60 4.18
334 335 3.522731 CTCTGGACGCTCCCTCCG 61.523 72.222 2.23 0.00 35.03 4.63
335 336 3.844090 GCTCTGGACGCTCCCTCC 61.844 72.222 2.23 0.00 35.03 4.30
336 337 4.200283 CGCTCTGGACGCTCCCTC 62.200 72.222 2.23 0.00 35.03 4.30
344 345 4.702081 ACGTGTCGCGCTCTGGAC 62.702 66.667 5.56 5.97 46.11 4.02
345 346 4.700365 CACGTGTCGCGCTCTGGA 62.700 66.667 7.58 0.00 46.11 3.86
353 354 4.147322 CCATTCGCCACGTGTCGC 62.147 66.667 15.09 10.47 0.00 5.19
354 355 4.147322 GCCATTCGCCACGTGTCG 62.147 66.667 13.61 13.61 0.00 4.35
355 356 2.742372 AGCCATTCGCCACGTGTC 60.742 61.111 15.65 0.00 38.78 3.67
356 357 2.803155 ATCAGCCATTCGCCACGTGT 62.803 55.000 15.65 0.00 38.78 4.49
357 358 2.040213 GATCAGCCATTCGCCACGTG 62.040 60.000 9.08 9.08 38.78 4.49
358 359 1.815421 GATCAGCCATTCGCCACGT 60.815 57.895 0.00 0.00 38.78 4.49
359 360 2.874694 CGATCAGCCATTCGCCACG 61.875 63.158 0.00 0.00 38.78 4.94
360 361 1.369091 AACGATCAGCCATTCGCCAC 61.369 55.000 0.00 0.00 38.91 5.01
361 362 1.078497 AACGATCAGCCATTCGCCA 60.078 52.632 0.00 0.00 38.91 5.69
362 363 1.353103 CAACGATCAGCCATTCGCC 59.647 57.895 0.00 0.00 38.91 5.54
363 364 1.297893 GCAACGATCAGCCATTCGC 60.298 57.895 0.00 0.00 38.91 4.70
364 365 1.011904 CGCAACGATCAGCCATTCG 60.012 57.895 0.00 0.00 41.04 3.34
365 366 0.302890 CTCGCAACGATCAGCCATTC 59.697 55.000 0.00 0.00 34.61 2.67
366 367 1.091771 CCTCGCAACGATCAGCCATT 61.092 55.000 0.00 0.00 34.61 3.16
367 368 1.522355 CCTCGCAACGATCAGCCAT 60.522 57.895 0.00 0.00 34.61 4.40
368 369 2.125552 CCTCGCAACGATCAGCCA 60.126 61.111 0.00 0.00 34.61 4.75
369 370 3.567797 GCCTCGCAACGATCAGCC 61.568 66.667 0.00 0.00 34.61 4.85
370 371 2.510238 AGCCTCGCAACGATCAGC 60.510 61.111 0.00 0.00 34.61 4.26
371 372 1.880340 GGAGCCTCGCAACGATCAG 60.880 63.158 0.00 0.00 34.61 2.90
372 373 2.184322 GGAGCCTCGCAACGATCA 59.816 61.111 0.00 0.00 34.61 2.92
373 374 2.586357 GGGAGCCTCGCAACGATC 60.586 66.667 3.57 0.00 34.61 3.69
374 375 4.514577 CGGGAGCCTCGCAACGAT 62.515 66.667 9.61 0.00 34.61 3.73
376 377 4.735132 TTCGGGAGCCTCGCAACG 62.735 66.667 9.61 0.36 0.00 4.10
377 378 2.815647 CTTCGGGAGCCTCGCAAC 60.816 66.667 9.61 0.00 0.00 4.17
378 379 4.082523 CCTTCGGGAGCCTCGCAA 62.083 66.667 9.61 2.18 37.25 4.85
388 389 2.552585 TTAACGAGCGCTCCTTCGGG 62.553 60.000 30.66 17.99 0.00 5.14
389 390 1.153901 TTAACGAGCGCTCCTTCGG 60.154 57.895 30.66 18.71 0.00 4.30
390 391 0.456312 AGTTAACGAGCGCTCCTTCG 60.456 55.000 30.66 22.24 0.00 3.79
391 392 2.159407 ACTAGTTAACGAGCGCTCCTTC 60.159 50.000 30.66 14.44 0.00 3.46
392 393 1.817447 ACTAGTTAACGAGCGCTCCTT 59.183 47.619 30.66 26.03 0.00 3.36
393 394 1.461559 ACTAGTTAACGAGCGCTCCT 58.538 50.000 30.66 22.52 0.00 3.69
394 395 1.918609 CAACTAGTTAACGAGCGCTCC 59.081 52.381 30.66 16.60 0.00 4.70
395 396 1.320852 GCAACTAGTTAACGAGCGCTC 59.679 52.381 27.64 27.64 0.00 5.03
396 397 1.067776 AGCAACTAGTTAACGAGCGCT 60.068 47.619 20.45 20.45 0.00 5.92
397 398 1.320852 GAGCAACTAGTTAACGAGCGC 59.679 52.381 14.82 16.38 0.00 5.92
398 399 2.847133 GAGAGCAACTAGTTAACGAGCG 59.153 50.000 14.82 8.20 0.00 5.03
399 400 3.834610 TGAGAGCAACTAGTTAACGAGC 58.165 45.455 14.82 7.28 0.00 5.03
400 401 9.900710 ATATTATGAGAGCAACTAGTTAACGAG 57.099 33.333 13.50 13.50 0.00 4.18
461 462 6.947464 ACCTCCGTCCCATAATATAAGATTG 58.053 40.000 0.00 0.00 0.00 2.67
462 463 7.899709 ACTACCTCCGTCCCATAATATAAGATT 59.100 37.037 0.00 0.00 0.00 2.40
463 464 7.420029 ACTACCTCCGTCCCATAATATAAGAT 58.580 38.462 0.00 0.00 0.00 2.40
465 466 8.465201 GTTACTACCTCCGTCCCATAATATAAG 58.535 40.741 0.00 0.00 0.00 1.73
477 478 5.127682 TCCCTTAATTGTTACTACCTCCGTC 59.872 44.000 0.00 0.00 0.00 4.79
478 479 5.025453 TCCCTTAATTGTTACTACCTCCGT 58.975 41.667 0.00 0.00 0.00 4.69
479 480 5.603170 TCCCTTAATTGTTACTACCTCCG 57.397 43.478 0.00 0.00 0.00 4.63
483 484 6.955364 AGGAGTTCCCTTAATTGTTACTACC 58.045 40.000 0.00 0.00 44.85 3.18
505 506 9.971922 CTAAATTATTGGCCTTTTCTAATGAGG 57.028 33.333 3.32 0.00 0.00 3.86
511 512 6.440354 AGCCCTAAATTATTGGCCTTTTCTA 58.560 36.000 3.32 0.00 45.14 2.10
518 519 5.183331 GCTAGTTAGCCCTAAATTATTGGCC 59.817 44.000 0.00 0.00 45.14 5.36
559 560 7.106439 TGACCAAAGAAACAAAATGCTAGAA 57.894 32.000 0.00 0.00 0.00 2.10
560 561 6.707440 TGACCAAAGAAACAAAATGCTAGA 57.293 33.333 0.00 0.00 0.00 2.43
561 562 7.769272 TTTGACCAAAGAAACAAAATGCTAG 57.231 32.000 0.00 0.00 30.94 3.42
575 576 5.010516 TGGTAATCCACACATTTGACCAAAG 59.989 40.000 1.57 0.00 39.03 2.77
691 710 0.250081 GCTCCCACTATACTGGCAGC 60.250 60.000 15.89 0.00 0.00 5.25
804 830 0.971386 ACGTAATCCCGTTGACCAGT 59.029 50.000 0.00 0.00 37.96 4.00
845 872 2.718563 GCGGGATAAAGAAAACAGGGA 58.281 47.619 0.00 0.00 0.00 4.20
848 876 2.222729 CGACGCGGGATAAAGAAAACAG 60.223 50.000 12.47 0.00 0.00 3.16
849 877 1.727880 CGACGCGGGATAAAGAAAACA 59.272 47.619 12.47 0.00 0.00 2.83
850 878 1.994779 TCGACGCGGGATAAAGAAAAC 59.005 47.619 12.47 0.00 0.00 2.43
851 879 2.367030 TCGACGCGGGATAAAGAAAA 57.633 45.000 12.47 0.00 0.00 2.29
852 880 2.466846 GATCGACGCGGGATAAAGAAA 58.533 47.619 12.47 0.00 0.00 2.52
854 882 0.040692 CGATCGACGCGGGATAAAGA 60.041 55.000 10.26 0.00 34.51 2.52
855 883 0.317603 ACGATCGACGCGGGATAAAG 60.318 55.000 24.34 10.13 46.94 1.85
868 918 1.433879 GGGGTGACAGAGACGATCG 59.566 63.158 14.88 14.88 0.00 3.69
914 964 3.368190 CTCTCTCCGGCACTGGCAG 62.368 68.421 14.16 14.16 43.71 4.85
915 965 3.385384 CTCTCTCCGGCACTGGCA 61.385 66.667 0.00 0.00 43.71 4.92
916 966 4.828925 GCTCTCTCCGGCACTGGC 62.829 72.222 0.00 0.00 40.13 4.85
917 967 2.849120 CTTGCTCTCTCCGGCACTGG 62.849 65.000 0.00 0.00 38.23 4.00
918 968 1.447489 CTTGCTCTCTCCGGCACTG 60.447 63.158 0.00 0.00 38.23 3.66
919 969 1.188219 TTCTTGCTCTCTCCGGCACT 61.188 55.000 0.00 0.00 38.23 4.40
920 970 0.739112 CTTCTTGCTCTCTCCGGCAC 60.739 60.000 0.00 0.00 38.23 5.01
921 971 1.593787 CTTCTTGCTCTCTCCGGCA 59.406 57.895 0.00 0.00 36.62 5.69
922 972 1.813337 GCTTCTTGCTCTCTCCGGC 60.813 63.158 0.00 0.00 38.95 6.13
923 973 1.153469 GGCTTCTTGCTCTCTCCGG 60.153 63.158 0.00 0.00 42.39 5.14
924 974 1.153469 GGGCTTCTTGCTCTCTCCG 60.153 63.158 0.00 0.00 39.58 4.63
925 975 0.326264 TTGGGCTTCTTGCTCTCTCC 59.674 55.000 0.00 0.00 44.09 3.71
926 976 1.277557 TCTTGGGCTTCTTGCTCTCTC 59.722 52.381 0.00 0.00 44.09 3.20
927 977 1.356124 TCTTGGGCTTCTTGCTCTCT 58.644 50.000 0.00 0.00 44.09 3.10
928 978 1.809547 GTTCTTGGGCTTCTTGCTCTC 59.190 52.381 0.00 0.00 44.09 3.20
929 979 1.879796 CGTTCTTGGGCTTCTTGCTCT 60.880 52.381 0.00 0.00 44.09 4.09
930 980 0.519077 CGTTCTTGGGCTTCTTGCTC 59.481 55.000 0.00 0.00 44.01 4.26
931 981 0.108585 TCGTTCTTGGGCTTCTTGCT 59.891 50.000 0.00 0.00 42.39 3.91
932 982 0.951558 TTCGTTCTTGGGCTTCTTGC 59.048 50.000 0.00 0.00 41.94 4.01
933 983 1.068954 GCTTCGTTCTTGGGCTTCTTG 60.069 52.381 0.00 0.00 0.00 3.02
934 984 1.202818 AGCTTCGTTCTTGGGCTTCTT 60.203 47.619 0.00 0.00 0.00 2.52
935 985 0.398318 AGCTTCGTTCTTGGGCTTCT 59.602 50.000 0.00 0.00 0.00 2.85
936 986 0.799393 GAGCTTCGTTCTTGGGCTTC 59.201 55.000 0.00 0.00 33.13 3.86
937 987 0.108585 TGAGCTTCGTTCTTGGGCTT 59.891 50.000 0.00 0.00 33.13 4.35
938 988 0.603975 GTGAGCTTCGTTCTTGGGCT 60.604 55.000 0.00 0.00 35.86 5.19
939 989 0.603975 AGTGAGCTTCGTTCTTGGGC 60.604 55.000 0.00 0.00 0.00 5.36
940 990 1.532868 CAAGTGAGCTTCGTTCTTGGG 59.467 52.381 0.00 0.00 33.98 4.12
941 991 1.532868 CCAAGTGAGCTTCGTTCTTGG 59.467 52.381 15.98 15.98 45.47 3.61
942 992 2.483876 TCCAAGTGAGCTTCGTTCTTG 58.516 47.619 0.00 0.00 36.34 3.02
957 1023 0.601311 GGCCGATCGATCCTTCCAAG 60.601 60.000 18.66 3.68 0.00 3.61
974 1040 1.881709 GCTAGCTAAACCGGTCGGC 60.882 63.158 8.04 13.02 39.32 5.54
979 1049 1.117150 TACCCAGCTAGCTAAACCGG 58.883 55.000 18.86 13.96 0.00 5.28
980 1050 1.479323 TGTACCCAGCTAGCTAAACCG 59.521 52.381 18.86 4.28 0.00 4.44
981 1051 3.467803 CATGTACCCAGCTAGCTAAACC 58.532 50.000 18.86 5.33 0.00 3.27
982 1052 3.134081 TCCATGTACCCAGCTAGCTAAAC 59.866 47.826 18.86 13.14 0.00 2.01
983 1053 3.380393 TCCATGTACCCAGCTAGCTAAA 58.620 45.455 18.86 0.00 0.00 1.85
984 1054 2.965831 CTCCATGTACCCAGCTAGCTAA 59.034 50.000 18.86 0.14 0.00 3.09
985 1055 2.598565 CTCCATGTACCCAGCTAGCTA 58.401 52.381 18.86 0.00 0.00 3.32
986 1056 1.418334 CTCCATGTACCCAGCTAGCT 58.582 55.000 12.68 12.68 0.00 3.32
987 1057 0.394565 CCTCCATGTACCCAGCTAGC 59.605 60.000 6.62 6.62 0.00 3.42
988 1058 1.967066 CTCCTCCATGTACCCAGCTAG 59.033 57.143 0.00 0.00 0.00 3.42
1177 1256 4.338118 TCCATTGATTTGGCGGAAGTAATC 59.662 41.667 0.00 0.00 36.66 1.75
1203 1284 6.380846 AGGATGGATGAGATCATAAGCTACTC 59.619 42.308 0.00 0.00 36.57 2.59
1213 1294 6.331042 AGGATAAACAAGGATGGATGAGATCA 59.669 38.462 0.00 0.00 0.00 2.92
1306 2635 3.241530 TCCCACTTCCTGCACGCT 61.242 61.111 0.00 0.00 0.00 5.07
1358 2687 2.768492 GGGCTTTGCAGATGCGGAG 61.768 63.158 0.00 1.95 45.83 4.63
1381 2710 3.445857 GAAGGAAGGATAGGAACGAACG 58.554 50.000 0.00 0.00 0.00 3.95
1467 2801 2.933906 CGCGTCCACCTGTAATTATTGT 59.066 45.455 0.00 0.00 0.00 2.71
1483 2873 4.210304 GATGACCTTGCGCGCGTC 62.210 66.667 32.35 26.05 0.00 5.19
1665 3192 2.159156 GCATCCATCACATGCACATTGT 60.159 45.455 0.00 0.00 45.19 2.71
1666 3193 2.469826 GCATCCATCACATGCACATTG 58.530 47.619 0.00 0.00 45.19 2.82
1667 3194 2.882927 GCATCCATCACATGCACATT 57.117 45.000 0.00 0.00 45.19 2.71
1672 3199 1.586422 ACGTAGCATCCATCACATGC 58.414 50.000 0.00 0.00 46.05 4.06
1673 3200 2.938451 ACAACGTAGCATCCATCACATG 59.062 45.455 0.00 0.00 0.00 3.21
1694 3299 0.960364 GCCCGCATCTTCCTGACAAA 60.960 55.000 0.00 0.00 0.00 2.83
1755 3360 1.153005 CAGATCCTGCAAGAGGGGC 60.153 63.158 0.00 0.00 43.06 5.80
1810 3415 9.736414 TCATACATACTAACCAGATAGAGTACC 57.264 37.037 0.00 0.00 0.00 3.34
1818 3423 7.561722 AGACTGTGTCATACATACTAACCAGAT 59.438 37.037 0.46 0.00 38.92 2.90
1822 3427 7.096884 TGAGACTGTGTCATACATACTAACC 57.903 40.000 3.20 0.00 38.92 2.85
1824 3429 8.197439 CCATTGAGACTGTGTCATACATACTAA 58.803 37.037 8.56 0.00 38.92 2.24
1825 3430 7.559897 TCCATTGAGACTGTGTCATACATACTA 59.440 37.037 8.56 0.00 38.92 1.82
1826 3431 6.381133 TCCATTGAGACTGTGTCATACATACT 59.619 38.462 8.56 0.00 38.92 2.12
1827 3432 6.573434 TCCATTGAGACTGTGTCATACATAC 58.427 40.000 8.56 0.00 38.92 2.39
1829 3434 5.682234 TCCATTGAGACTGTGTCATACAT 57.318 39.130 8.56 0.00 38.92 2.29
1831 3436 6.992063 AAATCCATTGAGACTGTGTCATAC 57.008 37.500 8.56 0.00 34.60 2.39
1832 3437 6.942005 ACAAAATCCATTGAGACTGTGTCATA 59.058 34.615 8.56 0.99 32.88 2.15
1835 5331 5.455392 CACAAAATCCATTGAGACTGTGTC 58.545 41.667 0.00 0.00 34.38 3.67
1853 5354 3.680490 TCGGATAAATGGACAGCACAAA 58.320 40.909 0.00 0.00 0.00 2.83
1880 5381 2.863740 CTCTGTACGTGTCAACAAGCAA 59.136 45.455 0.00 0.00 0.00 3.91
1883 5384 3.309388 CCTCTCTGTACGTGTCAACAAG 58.691 50.000 0.00 0.00 0.00 3.16
1912 5416 0.033228 CTCTGCTTATCAGCCCCTCG 59.967 60.000 0.00 0.00 46.74 4.63
1922 5426 1.977129 GGATGGCTCTCCTCTGCTTAT 59.023 52.381 0.12 0.00 32.18 1.73
2051 5729 3.249189 ATGGTGTGAGGGCGTGGT 61.249 61.111 0.00 0.00 0.00 4.16
2059 5737 1.722011 GTACCGAACCATGGTGTGAG 58.278 55.000 20.60 10.45 40.73 3.51
2062 5740 0.320073 CACGTACCGAACCATGGTGT 60.320 55.000 20.60 14.88 40.73 4.16
2095 5776 5.195940 CACAATGGATGATCCCACTAAAGT 58.804 41.667 9.36 0.00 39.34 2.66
2097 5778 4.949238 CACACAATGGATGATCCCACTAAA 59.051 41.667 9.36 0.00 39.34 1.85
2099 5780 3.779738 TCACACAATGGATGATCCCACTA 59.220 43.478 9.36 0.00 39.34 2.74
2120 5812 4.021894 ACCCAGCGACAATGTATCTATCTC 60.022 45.833 0.00 0.00 0.00 2.75
2121 5813 3.898123 ACCCAGCGACAATGTATCTATCT 59.102 43.478 0.00 0.00 0.00 1.98
2123 5815 3.244215 CCACCCAGCGACAATGTATCTAT 60.244 47.826 0.00 0.00 0.00 1.98
2124 5816 2.102420 CCACCCAGCGACAATGTATCTA 59.898 50.000 0.00 0.00 0.00 1.98
2125 5817 1.134401 CCACCCAGCGACAATGTATCT 60.134 52.381 0.00 0.00 0.00 1.98
2130 5822 0.888736 TTCACCACCCAGCGACAATG 60.889 55.000 0.00 0.00 0.00 2.82
2133 5825 2.110213 GTTCACCACCCAGCGACA 59.890 61.111 0.00 0.00 0.00 4.35
2137 5829 2.555547 GCACTGTTCACCACCCAGC 61.556 63.158 0.00 0.00 0.00 4.85
2159 5851 4.769688 GTCACCCTGACATTGTCATATCA 58.230 43.478 19.29 1.41 46.22 2.15
2184 5973 2.802787 ACGAATCGTCCATCTCCATC 57.197 50.000 0.96 0.00 33.69 3.51
2185 5974 2.543861 CGAACGAATCGTCCATCTCCAT 60.544 50.000 9.32 0.00 46.52 3.41
2186 5975 1.202256 CGAACGAATCGTCCATCTCCA 60.202 52.381 9.32 0.00 46.52 3.86
2187 5976 1.478137 CGAACGAATCGTCCATCTCC 58.522 55.000 9.32 0.00 46.52 3.71
2200 5989 2.137425 TTGAGCTTCTCCGCGAACGA 62.137 55.000 8.23 0.00 43.93 3.85
2205 5994 3.191539 GCCTTGAGCTTCTCCGCG 61.192 66.667 0.00 0.00 38.99 6.46
2237 6074 1.893808 ACCACAGCTTCAGGTTGCG 60.894 57.895 0.00 0.00 29.58 4.85
2246 6483 1.843368 CATGGATTCCACCACAGCTT 58.157 50.000 7.76 0.00 43.03 3.74
2252 6489 2.275089 CGGGCATGGATTCCACCA 59.725 61.111 7.76 0.00 44.41 4.17
2291 6531 2.317609 CCGAACCGCAAGACACTGG 61.318 63.158 0.00 0.00 43.02 4.00
2345 6585 2.279120 CGATCCTGGCAGACTCGC 60.279 66.667 17.94 0.00 0.00 5.03
2497 6740 2.987125 GAGGCTCGGGTGGCTTAA 59.013 61.111 0.00 0.00 43.09 1.85
3245 7516 1.457831 AGAGGATGTAGGACGGGCC 60.458 63.158 0.00 0.00 0.00 5.80
3264 7535 7.951347 ATTATTTGGATCCTCATTATCTGGC 57.049 36.000 14.23 0.00 0.00 4.85
3274 7545 8.462016 GGCACACATATTATTATTTGGATCCTC 58.538 37.037 14.23 0.00 0.00 3.71
3303 7574 1.220206 CCTAGTGGACCTGCTGCTG 59.780 63.158 0.00 0.00 34.57 4.41
3318 7589 8.598202 TTGGTTACAGATGTATCAACTACCTA 57.402 34.615 9.51 1.88 0.00 3.08
3330 7601 7.950512 TCAAAACAATCATTGGTTACAGATGT 58.049 30.769 0.00 0.00 40.29 3.06
3339 7610 5.085920 TCCCATCTCAAAACAATCATTGGT 58.914 37.500 1.58 0.00 34.12 3.67
3349 7620 6.093495 TCAACATATCGTTCCCATCTCAAAAC 59.907 38.462 0.00 0.00 34.86 2.43
3364 7635 2.100252 ACCACCGTACCTCAACATATCG 59.900 50.000 0.00 0.00 0.00 2.92
3368 7639 0.323629 CCACCACCGTACCTCAACAT 59.676 55.000 0.00 0.00 0.00 2.71
3375 7646 0.037975 CTACACACCACCACCGTACC 60.038 60.000 0.00 0.00 0.00 3.34
3376 7647 0.668401 GCTACACACCACCACCGTAC 60.668 60.000 0.00 0.00 0.00 3.67
3377 7648 1.667151 GCTACACACCACCACCGTA 59.333 57.895 0.00 0.00 0.00 4.02
3378 7649 2.424302 GCTACACACCACCACCGT 59.576 61.111 0.00 0.00 0.00 4.83
3379 7650 2.736995 CGCTACACACCACCACCG 60.737 66.667 0.00 0.00 0.00 4.94
3394 7665 1.216710 CCTGAGAGGAGTGGAACGC 59.783 63.158 0.00 0.00 45.86 4.84
3414 7685 2.421314 CTGTGCCTGTGACGGTCA 59.579 61.111 6.76 6.76 0.00 4.02
3418 7689 1.227527 TGTTCCTGTGCCTGTGACG 60.228 57.895 0.00 0.00 0.00 4.35
3419 7690 0.463654 TGTGTTCCTGTGCCTGTGAC 60.464 55.000 0.00 0.00 0.00 3.67
3420 7691 0.463654 GTGTGTTCCTGTGCCTGTGA 60.464 55.000 0.00 0.00 0.00 3.58
3421 7692 0.464373 AGTGTGTTCCTGTGCCTGTG 60.464 55.000 0.00 0.00 0.00 3.66
3422 7693 1.070758 CTAGTGTGTTCCTGTGCCTGT 59.929 52.381 0.00 0.00 0.00 4.00
3423 7694 1.070758 ACTAGTGTGTTCCTGTGCCTG 59.929 52.381 0.00 0.00 0.00 4.85
3424 7695 1.424638 ACTAGTGTGTTCCTGTGCCT 58.575 50.000 0.00 0.00 0.00 4.75
3425 7696 2.256117 AACTAGTGTGTTCCTGTGCC 57.744 50.000 0.00 0.00 0.00 5.01
3426 7697 3.991367 ACTAACTAGTGTGTTCCTGTGC 58.009 45.455 0.00 0.00 34.72 4.57
3427 7698 6.641314 CACTAACTAACTAGTGTGTTCCTGTG 59.359 42.308 14.50 15.93 42.54 3.66
3428 7699 6.746120 CACTAACTAACTAGTGTGTTCCTGT 58.254 40.000 14.50 10.62 42.54 4.00
3438 7709 4.276678 TCACGTGCACACTAACTAACTAGT 59.723 41.667 18.64 0.00 38.39 2.57
3439 7710 4.790878 TCACGTGCACACTAACTAACTAG 58.209 43.478 18.64 0.00 0.00 2.57
3440 7711 4.834357 TCACGTGCACACTAACTAACTA 57.166 40.909 18.64 0.00 0.00 2.24
3441 7712 3.720949 TCACGTGCACACTAACTAACT 57.279 42.857 18.64 0.00 0.00 2.24
3442 7713 4.432503 CGATTCACGTGCACACTAACTAAC 60.433 45.833 18.64 0.00 37.22 2.34
3443 7714 3.671459 CGATTCACGTGCACACTAACTAA 59.329 43.478 18.64 1.12 37.22 2.24
3444 7715 3.058085 TCGATTCACGTGCACACTAACTA 60.058 43.478 18.64 0.00 43.13 2.24
3445 7716 2.058798 CGATTCACGTGCACACTAACT 58.941 47.619 18.64 0.00 37.22 2.24
3446 7717 2.055838 TCGATTCACGTGCACACTAAC 58.944 47.619 18.64 2.44 43.13 2.34
3447 7718 2.425578 TCGATTCACGTGCACACTAA 57.574 45.000 18.64 7.42 43.13 2.24
3448 7719 2.647529 ATCGATTCACGTGCACACTA 57.352 45.000 18.64 0.00 43.13 2.74
3449 7720 1.460743 CAATCGATTCACGTGCACACT 59.539 47.619 18.64 0.00 43.13 3.55
3450 7721 1.464023 CCAATCGATTCACGTGCACAC 60.464 52.381 18.64 1.33 43.13 3.82
3451 7722 0.795698 CCAATCGATTCACGTGCACA 59.204 50.000 18.64 0.00 43.13 4.57
3452 7723 0.796312 ACCAATCGATTCACGTGCAC 59.204 50.000 11.67 6.82 43.13 4.57
3453 7724 1.996898 GTACCAATCGATTCACGTGCA 59.003 47.619 11.67 0.00 43.13 4.57
3454 7725 1.996898 TGTACCAATCGATTCACGTGC 59.003 47.619 11.67 8.86 43.13 5.34
3455 7726 3.245284 GGATGTACCAATCGATTCACGTG 59.755 47.826 9.94 9.94 39.76 4.49
3456 7727 3.118920 TGGATGTACCAATCGATTCACGT 60.119 43.478 7.92 7.96 46.75 4.49
3457 7728 3.453424 TGGATGTACCAATCGATTCACG 58.547 45.455 7.92 1.25 46.75 4.35
3476 7747 0.549950 AGCCCATCCAGAGATTGTGG 59.450 55.000 0.00 0.00 36.28 4.17
3477 7748 3.565764 TTAGCCCATCCAGAGATTGTG 57.434 47.619 0.00 0.00 0.00 3.33
3478 7749 3.979347 AGATTAGCCCATCCAGAGATTGT 59.021 43.478 0.00 0.00 0.00 2.71
3479 7750 4.637387 AGATTAGCCCATCCAGAGATTG 57.363 45.455 0.00 0.00 0.00 2.67
3480 7751 5.659849 AAAGATTAGCCCATCCAGAGATT 57.340 39.130 0.00 0.00 0.00 2.40
3481 7752 5.848921 AGTAAAGATTAGCCCATCCAGAGAT 59.151 40.000 0.00 0.00 0.00 2.75
3482 7753 5.219739 AGTAAAGATTAGCCCATCCAGAGA 58.780 41.667 0.00 0.00 0.00 3.10
3483 7754 5.559148 AGTAAAGATTAGCCCATCCAGAG 57.441 43.478 0.00 0.00 0.00 3.35
3484 7755 6.143915 ACTAGTAAAGATTAGCCCATCCAGA 58.856 40.000 0.00 0.00 0.00 3.86
3485 7756 6.426646 ACTAGTAAAGATTAGCCCATCCAG 57.573 41.667 0.00 0.00 0.00 3.86
3486 7757 7.924358 TTACTAGTAAAGATTAGCCCATCCA 57.076 36.000 12.99 0.00 0.00 3.41
3501 7772 4.949856 ACGTTCGATCCCCTTTACTAGTAA 59.050 41.667 11.38 11.38 0.00 2.24
3507 7778 1.135286 ACGACGTTCGATCCCCTTTAC 60.135 52.381 13.06 0.00 43.74 2.01
3591 7983 4.015406 TGCGTGCGGGATGGACTT 62.015 61.111 0.00 0.00 36.65 3.01
4256 12363 6.823689 GTCACAATAATCCTCAAGAAAGGCTA 59.176 38.462 0.00 0.00 36.29 3.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.