Multiple sequence alignment - TraesCS7D01G515800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G515800 chr7D 100.000 5379 0 0 1 5379 615908059 615902681 0.000000e+00 9934.0
1 TraesCS7D01G515800 chr7D 89.074 540 29 10 2 525 474523370 474522845 1.260000e-180 643.0
2 TraesCS7D01G515800 chr7D 83.193 238 36 3 5111 5346 181846326 181846091 1.170000e-51 215.0
3 TraesCS7D01G515800 chr7D 81.395 215 34 2 5119 5327 53640951 53640737 2.580000e-38 171.0
4 TraesCS7D01G515800 chr7D 100.000 43 0 0 4068 4110 424708861 424708819 4.470000e-11 80.5
5 TraesCS7D01G515800 chr7D 95.833 48 2 0 4068 4115 312564482 312564529 1.610000e-10 78.7
6 TraesCS7D01G515800 chr7B 88.077 3204 215 65 547 3622 708955534 708952370 0.000000e+00 3646.0
7 TraesCS7D01G515800 chr7B 87.852 782 64 8 4602 5379 708951799 708951045 0.000000e+00 889.0
8 TraesCS7D01G515800 chr7B 90.086 464 40 4 4110 4573 708952255 708951798 9.970000e-167 597.0
9 TraesCS7D01G515800 chr7B 84.416 231 21 4 3793 4023 708952328 708952113 4.220000e-51 213.0
10 TraesCS7D01G515800 chr7B 81.028 253 44 3 5111 5361 150029132 150028882 1.180000e-46 198.0
11 TraesCS7D01G515800 chr7B 84.663 163 25 0 5177 5339 150070509 150070347 4.310000e-36 163.0
12 TraesCS7D01G515800 chr7A 89.725 2550 158 58 1217 3720 708668253 708665762 0.000000e+00 3162.0
13 TraesCS7D01G515800 chr7A 86.120 1304 109 29 4125 5379 708665689 708664409 0.000000e+00 1339.0
14 TraesCS7D01G515800 chr7A 83.062 614 26 31 527 1101 708669168 708668594 2.250000e-133 486.0
15 TraesCS7D01G515800 chr7A 84.416 231 32 3 5111 5339 190014659 190014887 1.950000e-54 224.0
16 TraesCS7D01G515800 chr7A 80.932 236 11 12 3788 4023 708665765 708665564 7.210000e-34 156.0
17 TraesCS7D01G515800 chr4D 92.421 541 25 5 1 525 63077359 63076819 0.000000e+00 758.0
18 TraesCS7D01G515800 chr4D 95.096 469 23 0 1 469 50231518 50231050 0.000000e+00 739.0
19 TraesCS7D01G515800 chr4D 91.513 542 30 4 1 526 406229385 406229926 0.000000e+00 732.0
20 TraesCS7D01G515800 chr4D 94.670 469 25 0 1 469 501080085 501080553 0.000000e+00 728.0
21 TraesCS7D01G515800 chr4D 90.037 542 37 2 1 525 337138104 337137563 0.000000e+00 686.0
22 TraesCS7D01G515800 chr4D 85.833 120 15 2 1008 1126 74374670 74374552 5.660000e-25 126.0
23 TraesCS7D01G515800 chr3D 92.251 542 26 1 1 526 579568657 579568116 0.000000e+00 754.0
24 TraesCS7D01G515800 chr3D 92.066 542 27 6 1 526 579563145 579562604 0.000000e+00 749.0
25 TraesCS7D01G515800 chr3D 90.792 543 34 3 1 527 103369984 103370526 0.000000e+00 712.0
26 TraesCS7D01G515800 chrUn 92.251 542 25 5 1 526 115109784 115110324 0.000000e+00 752.0
27 TraesCS7D01G515800 chr1D 92.237 541 26 1 1 525 19875221 19874681 0.000000e+00 752.0
28 TraesCS7D01G515800 chr1D 92.066 542 27 4 1 526 250741371 250740830 0.000000e+00 749.0
29 TraesCS7D01G515800 chr1D 92.052 541 27 2 1 525 15568167 15568707 0.000000e+00 747.0
30 TraesCS7D01G515800 chr1D 90.406 542 36 1 1 526 65564058 65564599 0.000000e+00 699.0
31 TraesCS7D01G515800 chr1D 93.902 82 3 2 3715 3796 257365448 257365369 7.320000e-24 122.0
32 TraesCS7D01G515800 chr1D 94.805 77 2 2 3719 3795 400062972 400062898 9.460000e-23 119.0
33 TraesCS7D01G515800 chr5D 90.959 542 32 5 1 525 358590172 358589631 0.000000e+00 713.0
34 TraesCS7D01G515800 chr5D 94.118 51 2 1 4059 4109 456610979 456610930 5.780000e-10 76.8
35 TraesCS7D01G515800 chr5A 90.573 541 35 1 1 525 528554882 528555422 0.000000e+00 702.0
36 TraesCS7D01G515800 chr5A 92.982 57 3 1 4054 4109 331809359 331809303 1.240000e-11 82.4
37 TraesCS7D01G515800 chr5A 92.982 57 3 1 4054 4109 331821614 331821558 1.240000e-11 82.4
38 TraesCS7D01G515800 chr6A 85.846 544 38 9 1 527 83061633 83061112 4.740000e-150 542.0
39 TraesCS7D01G515800 chr6A 96.078 51 1 1 4059 4109 409430934 409430983 1.240000e-11 82.4
40 TraesCS7D01G515800 chr4A 82.667 300 49 1 5080 5379 97308232 97307936 4.130000e-66 263.0
41 TraesCS7D01G515800 chr4A 86.066 122 11 5 1008 1126 513288388 513288506 5.660000e-25 126.0
42 TraesCS7D01G515800 chr1A 85.455 165 8 1 378 526 403135796 403135632 2.010000e-34 158.0
43 TraesCS7D01G515800 chr1A 93.750 80 3 2 3717 3795 440885274 440885352 9.460000e-23 119.0
44 TraesCS7D01G515800 chr1A 94.737 76 4 0 3717 3792 454330207 454330132 9.460000e-23 119.0
45 TraesCS7D01G515800 chr1A 93.878 49 3 0 4069 4117 508628977 508628929 2.080000e-09 75.0
46 TraesCS7D01G515800 chr4B 86.667 120 14 2 1008 1126 106859891 106859773 1.220000e-26 132.0
47 TraesCS7D01G515800 chr6D 96.154 78 2 1 3719 3796 469492411 469492335 5.660000e-25 126.0
48 TraesCS7D01G515800 chr6D 96.154 78 2 1 3719 3796 469511219 469511143 5.660000e-25 126.0
49 TraesCS7D01G515800 chr6D 100.000 42 0 0 4068 4109 318346677 318346636 1.610000e-10 78.7
50 TraesCS7D01G515800 chr2A 97.297 74 1 1 3717 3790 754039013 754039085 2.030000e-24 124.0
51 TraesCS7D01G515800 chr6B 93.827 81 2 1 3714 3791 693939306 693939386 9.460000e-23 119.0
52 TraesCS7D01G515800 chr2D 92.683 82 5 1 3716 3797 347465709 347465789 3.400000e-22 117.0
53 TraesCS7D01G515800 chr3A 90.000 60 4 2 4051 4109 131076541 131076599 5.780000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G515800 chr7D 615902681 615908059 5378 True 9934.00 9934 100.00000 1 5379 1 chr7D.!!$R5 5378
1 TraesCS7D01G515800 chr7D 474522845 474523370 525 True 643.00 643 89.07400 2 525 1 chr7D.!!$R4 523
2 TraesCS7D01G515800 chr7B 708951045 708955534 4489 True 1336.25 3646 87.60775 547 5379 4 chr7B.!!$R3 4832
3 TraesCS7D01G515800 chr7A 708664409 708669168 4759 True 1285.75 3162 84.95975 527 5379 4 chr7A.!!$R1 4852
4 TraesCS7D01G515800 chr4D 63076819 63077359 540 True 758.00 758 92.42100 1 525 1 chr4D.!!$R2 524
5 TraesCS7D01G515800 chr4D 406229385 406229926 541 False 732.00 732 91.51300 1 526 1 chr4D.!!$F1 525
6 TraesCS7D01G515800 chr4D 337137563 337138104 541 True 686.00 686 90.03700 1 525 1 chr4D.!!$R4 524
7 TraesCS7D01G515800 chr3D 579568116 579568657 541 True 754.00 754 92.25100 1 526 1 chr3D.!!$R2 525
8 TraesCS7D01G515800 chr3D 579562604 579563145 541 True 749.00 749 92.06600 1 526 1 chr3D.!!$R1 525
9 TraesCS7D01G515800 chr3D 103369984 103370526 542 False 712.00 712 90.79200 1 527 1 chr3D.!!$F1 526
10 TraesCS7D01G515800 chrUn 115109784 115110324 540 False 752.00 752 92.25100 1 526 1 chrUn.!!$F1 525
11 TraesCS7D01G515800 chr1D 19874681 19875221 540 True 752.00 752 92.23700 1 525 1 chr1D.!!$R1 524
12 TraesCS7D01G515800 chr1D 250740830 250741371 541 True 749.00 749 92.06600 1 526 1 chr1D.!!$R2 525
13 TraesCS7D01G515800 chr1D 15568167 15568707 540 False 747.00 747 92.05200 1 525 1 chr1D.!!$F1 524
14 TraesCS7D01G515800 chr1D 65564058 65564599 541 False 699.00 699 90.40600 1 526 1 chr1D.!!$F2 525
15 TraesCS7D01G515800 chr5D 358589631 358590172 541 True 713.00 713 90.95900 1 525 1 chr5D.!!$R1 524
16 TraesCS7D01G515800 chr5A 528554882 528555422 540 False 702.00 702 90.57300 1 525 1 chr5A.!!$F1 524
17 TraesCS7D01G515800 chr6A 83061112 83061633 521 True 542.00 542 85.84600 1 527 1 chr6A.!!$R1 526

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
920 991 0.828343 GCGGGGGACTGTCTAGCTAT 60.828 60.000 7.85 0.0 39.64 2.97 F
1390 1711 0.389687 ATTTCAAAATGCACGGGCGG 60.390 50.000 4.58 0.0 45.35 6.13 F
1688 2032 1.065551 GGTAATGCGAGGTTGGATTGC 59.934 52.381 0.00 0.0 32.87 3.56 F
2900 3257 1.140852 GCCTATCCACACACATGGCTA 59.859 52.381 0.00 0.0 39.85 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2312 2668 0.389817 TGTCAAGCACGGGAGAATCG 60.390 55.0 0.0 0.0 34.37 3.34 R
3205 3582 0.395586 TCCAGTGCCTGCAAAAGTGT 60.396 50.0 0.0 0.0 0.00 3.55 R
3206 3583 0.963962 ATCCAGTGCCTGCAAAAGTG 59.036 50.0 0.0 0.0 0.00 3.16 R
4456 4838 0.035317 TTCCGCTGCAACTCACATCT 59.965 50.0 0.0 0.0 0.00 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
316 318 1.771565 AGGCGCCACACTATACAGTA 58.228 50.000 31.54 0.00 32.21 2.74
317 319 2.317040 AGGCGCCACACTATACAGTAT 58.683 47.619 31.54 0.00 32.21 2.12
357 359 5.491070 ACTCTGCACAATGACTTAGCAATA 58.509 37.500 0.00 0.00 34.45 1.90
358 360 5.939883 ACTCTGCACAATGACTTAGCAATAA 59.060 36.000 0.00 0.00 34.45 1.40
654 675 1.298014 CACTCCAGGCACCCTTCTC 59.702 63.158 0.00 0.00 0.00 2.87
920 991 0.828343 GCGGGGGACTGTCTAGCTAT 60.828 60.000 7.85 0.00 39.64 2.97
1026 1112 2.112297 TCGGACAACACCAAGGGC 59.888 61.111 0.00 0.00 0.00 5.19
1141 1227 3.230608 GGTACCCACCCTACCCTAC 57.769 63.158 0.00 0.00 39.11 3.18
1142 1228 0.399091 GGTACCCACCCTACCCTACC 60.399 65.000 0.00 0.00 39.11 3.18
1143 1229 0.399091 GTACCCACCCTACCCTACCC 60.399 65.000 0.00 0.00 0.00 3.69
1144 1230 1.602675 TACCCACCCTACCCTACCCC 61.603 65.000 0.00 0.00 0.00 4.95
1145 1231 2.040148 CCACCCTACCCTACCCCC 60.040 72.222 0.00 0.00 0.00 5.40
1146 1232 2.789314 CACCCTACCCTACCCCCA 59.211 66.667 0.00 0.00 0.00 4.96
1147 1233 1.691689 CACCCTACCCTACCCCCAC 60.692 68.421 0.00 0.00 0.00 4.61
1148 1234 2.445274 CCCTACCCTACCCCCACG 60.445 72.222 0.00 0.00 0.00 4.94
1149 1235 3.159347 CCTACCCTACCCCCACGC 61.159 72.222 0.00 0.00 0.00 5.34
1150 1236 3.159347 CTACCCTACCCCCACGCC 61.159 72.222 0.00 0.00 0.00 5.68
1151 1237 3.988050 CTACCCTACCCCCACGCCA 62.988 68.421 0.00 0.00 0.00 5.69
1178 1264 4.824515 CGCCGTCTCCCCCTCTCT 62.825 72.222 0.00 0.00 0.00 3.10
1179 1265 2.835895 GCCGTCTCCCCCTCTCTC 60.836 72.222 0.00 0.00 0.00 3.20
1180 1266 3.011885 CCGTCTCCCCCTCTCTCT 58.988 66.667 0.00 0.00 0.00 3.10
1382 1703 1.204467 TGCCCCGAGATTTCAAAATGC 59.796 47.619 0.00 0.00 0.00 3.56
1390 1711 0.389687 ATTTCAAAATGCACGGGCGG 60.390 50.000 4.58 0.00 45.35 6.13
1534 1860 5.480422 TCGTAGTATCATGCTTCCATATGGT 59.520 40.000 21.28 2.08 36.34 3.55
1540 1866 6.585695 ATCATGCTTCCATATGGTTCAATC 57.414 37.500 21.28 5.24 36.34 2.67
1542 1868 5.892686 TCATGCTTCCATATGGTTCAATCAA 59.107 36.000 21.28 5.69 36.34 2.57
1543 1869 5.840243 TGCTTCCATATGGTTCAATCAAG 57.160 39.130 21.28 15.46 36.34 3.02
1545 1871 5.951148 TGCTTCCATATGGTTCAATCAAGAA 59.049 36.000 21.28 7.58 36.34 2.52
1546 1872 6.436847 TGCTTCCATATGGTTCAATCAAGAAA 59.563 34.615 21.28 3.07 36.34 2.52
1547 1873 7.124599 TGCTTCCATATGGTTCAATCAAGAAAT 59.875 33.333 21.28 0.00 36.34 2.17
1548 1874 7.437267 GCTTCCATATGGTTCAATCAAGAAATG 59.563 37.037 21.28 1.39 36.34 2.32
1550 1876 6.324512 TCCATATGGTTCAATCAAGAAATGGG 59.675 38.462 21.28 0.00 34.87 4.00
1552 1878 3.855668 TGGTTCAATCAAGAAATGGGGT 58.144 40.909 0.00 0.00 0.00 4.95
1553 1879 5.004361 TGGTTCAATCAAGAAATGGGGTA 57.996 39.130 0.00 0.00 0.00 3.69
1565 1905 7.507616 TCAAGAAATGGGGTACAACTTTAACAT 59.492 33.333 0.00 0.00 0.00 2.71
1574 1914 8.364894 GGGGTACAACTTTAACATCAAGAAATT 58.635 33.333 0.00 0.00 0.00 1.82
1576 1916 9.191995 GGTACAACTTTAACATCAAGAAATTGG 57.808 33.333 0.00 0.00 0.00 3.16
1577 1917 9.959749 GTACAACTTTAACATCAAGAAATTGGA 57.040 29.630 0.00 0.00 0.00 3.53
1588 1932 9.790344 ACATCAAGAAATTGGATAGGAATAGAG 57.210 33.333 0.00 0.00 0.00 2.43
1617 1961 5.575606 CCATGATGAGAAATGAACAGTTTGC 59.424 40.000 0.00 0.00 0.00 3.68
1686 2030 1.283613 TGGGTAATGCGAGGTTGGATT 59.716 47.619 0.00 0.00 34.13 3.01
1688 2032 1.065551 GGTAATGCGAGGTTGGATTGC 59.934 52.381 0.00 0.00 32.87 3.56
1689 2033 1.742831 GTAATGCGAGGTTGGATTGCA 59.257 47.619 0.00 0.00 41.21 4.08
1691 2035 1.255882 ATGCGAGGTTGGATTGCAAA 58.744 45.000 1.71 0.00 40.37 3.68
1700 2044 3.189080 GGTTGGATTGCAAATTTTCCAGC 59.811 43.478 19.71 19.71 39.33 4.85
1718 2062 3.371917 CCAGCCCAGTAGATTCCAATGAA 60.372 47.826 0.00 0.00 34.33 2.57
1738 2086 3.377253 AGGTGGCTCAAATGTCATGAT 57.623 42.857 0.00 0.00 0.00 2.45
1742 2090 3.635373 GTGGCTCAAATGTCATGATCCAT 59.365 43.478 0.00 0.00 42.95 3.41
1743 2091 3.887110 TGGCTCAAATGTCATGATCCATC 59.113 43.478 0.00 0.00 37.97 3.51
1745 2093 4.215827 GGCTCAAATGTCATGATCCATCTC 59.784 45.833 0.00 0.00 34.10 2.75
1748 2096 5.747342 TCAAATGTCATGATCCATCTCACA 58.253 37.500 0.00 0.00 0.00 3.58
1751 2099 2.502538 TGTCATGATCCATCTCACAGCA 59.497 45.455 0.00 0.00 0.00 4.41
1753 2101 2.502538 TCATGATCCATCTCACAGCACA 59.497 45.455 0.00 0.00 0.00 4.57
1754 2102 3.135895 TCATGATCCATCTCACAGCACAT 59.864 43.478 0.00 0.00 0.00 3.21
1767 2115 5.172205 TCACAGCACATTTTACTGCGTATA 58.828 37.500 0.00 0.00 38.51 1.47
1867 2215 7.065504 GTCCTACTCCTTATTAACCTCCTGTA 58.934 42.308 0.00 0.00 0.00 2.74
1871 2219 9.584008 CTACTCCTTATTAACCTCCTGTATGTA 57.416 37.037 0.00 0.00 0.00 2.29
1895 2243 9.003658 GTACTTAATTAGCATGATTGGCACTAT 57.996 33.333 0.00 0.00 0.00 2.12
1925 2276 1.863267 TTTTTGGCATTTCACCTGCG 58.137 45.000 0.00 0.00 40.59 5.18
1974 2325 5.707298 TCACCCAATTCAGACTTGAGATTTC 59.293 40.000 2.06 0.00 34.15 2.17
1993 2344 5.617528 TTTCTGTTGGTAACTGTCCTACA 57.382 39.130 3.57 3.57 38.08 2.74
2008 2359 5.815581 TGTCCTACAATTCCAGCTTACATT 58.184 37.500 0.00 0.00 0.00 2.71
2107 2462 3.375299 GGCTTGATCACCAGTATGTTCAC 59.625 47.826 0.00 0.00 29.96 3.18
2125 2480 2.158827 TCACTCTGCACAAAGTTAGCCA 60.159 45.455 0.00 0.00 0.00 4.75
2140 2495 7.823745 AAGTTAGCCATGGGTATTGATTTAG 57.176 36.000 23.78 0.00 0.00 1.85
2278 2633 5.741388 AGCATAATCGTCAGGTGAATTTC 57.259 39.130 0.00 0.00 0.00 2.17
2308 2664 1.834188 ACCCTTAGTTTCAATGCCGG 58.166 50.000 0.00 0.00 0.00 6.13
2312 2668 2.159379 CCTTAGTTTCAATGCCGGCTTC 60.159 50.000 29.70 8.97 0.00 3.86
2578 2935 1.568612 GCACACCCACATGTCTGACG 61.569 60.000 0.00 0.00 0.00 4.35
2640 2997 3.622459 GCATATGCGGGAACAACAC 57.378 52.632 12.82 0.00 0.00 3.32
2748 3105 9.613428 CTTCAATGGGATCATTAACAGTAAGTA 57.387 33.333 0.00 0.00 41.29 2.24
2792 3149 6.515035 GCACAGCCTAACATAAGTGAGTTTTT 60.515 38.462 0.00 0.00 0.00 1.94
2837 3194 2.414161 GGTTGTTAGCATCAAAGCCGTC 60.414 50.000 0.00 0.00 34.23 4.79
2900 3257 1.140852 GCCTATCCACACACATGGCTA 59.859 52.381 0.00 0.00 39.85 3.93
3038 3395 3.314357 TGATTGCATCTACATGAGCTTGC 59.686 43.478 0.00 4.13 35.63 4.01
3040 3397 2.713877 TGCATCTACATGAGCTTGCAA 58.286 42.857 0.00 0.00 39.57 4.08
3042 3399 3.314357 TGCATCTACATGAGCTTGCAATC 59.686 43.478 0.00 0.00 39.57 2.67
3043 3400 3.314357 GCATCTACATGAGCTTGCAATCA 59.686 43.478 0.00 1.69 35.34 2.57
3044 3401 4.554919 GCATCTACATGAGCTTGCAATCAG 60.555 45.833 0.00 0.00 35.34 2.90
3045 3402 3.538591 TCTACATGAGCTTGCAATCAGG 58.461 45.455 11.96 11.96 33.61 3.86
3066 3426 7.540299 TCAGGTTTTGACAACTTACGATTTTT 58.460 30.769 0.00 0.00 0.00 1.94
3086 3446 5.607119 TTTTCACGGATCTGCTACTTTTC 57.393 39.130 0.00 0.00 0.00 2.29
3096 3456 6.367969 GGATCTGCTACTTTTCGTTACTTGAA 59.632 38.462 0.00 0.00 0.00 2.69
3098 3458 7.724305 TCTGCTACTTTTCGTTACTTGAATT 57.276 32.000 0.00 0.00 0.00 2.17
3099 3459 7.793902 TCTGCTACTTTTCGTTACTTGAATTC 58.206 34.615 0.00 0.00 0.00 2.17
3100 3460 7.439955 TCTGCTACTTTTCGTTACTTGAATTCA 59.560 33.333 3.38 3.38 0.00 2.57
3101 3461 7.572759 TGCTACTTTTCGTTACTTGAATTCAG 58.427 34.615 8.41 5.87 0.00 3.02
3102 3462 7.225931 TGCTACTTTTCGTTACTTGAATTCAGT 59.774 33.333 8.41 11.19 0.00 3.41
3103 3463 7.740781 GCTACTTTTCGTTACTTGAATTCAGTC 59.259 37.037 8.41 0.00 0.00 3.51
3104 3464 7.548196 ACTTTTCGTTACTTGAATTCAGTCA 57.452 32.000 8.41 0.00 0.00 3.41
3125 3485 9.965824 CAGTCAAAACTTTATTTTCTACCACAT 57.034 29.630 0.00 0.00 31.71 3.21
3189 3566 9.855021 ATTTAGTGTATTTGTATGTTTTCTGGC 57.145 29.630 0.00 0.00 0.00 4.85
3205 3582 8.965819 TGTTTTCTGGCTATGCTGATTTTATTA 58.034 29.630 0.00 0.00 0.00 0.98
3206 3583 9.237846 GTTTTCTGGCTATGCTGATTTTATTAC 57.762 33.333 0.00 0.00 0.00 1.89
3320 3697 8.044060 TCAATTATGTTCAAGGTAGAAAGCAG 57.956 34.615 0.00 0.00 0.00 4.24
3425 3802 5.524281 GGCTGGACAAAGCTTAAGTAGTATC 59.476 44.000 0.00 0.00 43.06 2.24
3539 3916 4.141981 ACAATTTTGTGGTTCAGTGATGCA 60.142 37.500 0.00 0.00 40.49 3.96
3553 3930 0.933097 GATGCACGCATCTGGTAGTG 59.067 55.000 21.88 0.00 46.67 2.74
3564 3941 5.402398 GCATCTGGTAGTGGTTTCAAAATC 58.598 41.667 0.00 0.00 0.00 2.17
3596 3973 1.476291 GCTGCATCACCATCATCTCCA 60.476 52.381 0.00 0.00 0.00 3.86
3601 3978 4.098807 TGCATCACCATCATCTCCATTTTG 59.901 41.667 0.00 0.00 0.00 2.44
3603 3980 5.394883 GCATCACCATCATCTCCATTTTGTT 60.395 40.000 0.00 0.00 0.00 2.83
3604 3981 5.648178 TCACCATCATCTCCATTTTGTTG 57.352 39.130 0.00 0.00 0.00 3.33
3605 3982 5.078949 TCACCATCATCTCCATTTTGTTGT 58.921 37.500 0.00 0.00 0.00 3.32
3606 3983 5.047872 TCACCATCATCTCCATTTTGTTGTG 60.048 40.000 0.00 0.00 0.00 3.33
3607 3984 5.047872 CACCATCATCTCCATTTTGTTGTGA 60.048 40.000 0.00 0.00 0.00 3.58
3608 3985 5.184479 ACCATCATCTCCATTTTGTTGTGAG 59.816 40.000 0.00 0.00 0.00 3.51
3609 3986 5.393787 CCATCATCTCCATTTTGTTGTGAGG 60.394 44.000 0.00 0.00 0.00 3.86
3610 3987 4.081406 TCATCTCCATTTTGTTGTGAGGG 58.919 43.478 0.00 0.00 0.00 4.30
3611 3988 3.874383 TCTCCATTTTGTTGTGAGGGA 57.126 42.857 0.00 0.00 0.00 4.20
3623 4000 9.974980 TTTTGTTGTGAGGGAAATAATAACTTC 57.025 29.630 0.00 0.00 0.00 3.01
3646 4023 5.357032 TCAAGTTTCTCAAGACACCCTTTTC 59.643 40.000 0.00 0.00 31.42 2.29
3648 4025 5.510430 AGTTTCTCAAGACACCCTTTTCTT 58.490 37.500 0.00 0.00 31.42 2.52
3651 4028 5.835113 TCTCAAGACACCCTTTTCTTTTG 57.165 39.130 0.00 0.00 31.42 2.44
3653 4030 5.949354 TCTCAAGACACCCTTTTCTTTTGAA 59.051 36.000 0.00 0.00 36.52 2.69
3655 4032 7.124147 TCTCAAGACACCCTTTTCTTTTGAAAT 59.876 33.333 0.00 0.00 46.43 2.17
3657 4034 8.413229 TCAAGACACCCTTTTCTTTTGAAATAG 58.587 33.333 0.00 0.00 46.43 1.73
3659 4036 8.306313 AGACACCCTTTTCTTTTGAAATAGTT 57.694 30.769 0.00 0.00 46.43 2.24
3660 4037 8.758829 AGACACCCTTTTCTTTTGAAATAGTTT 58.241 29.630 0.00 0.00 46.43 2.66
3661 4038 8.716646 ACACCCTTTTCTTTTGAAATAGTTTG 57.283 30.769 0.00 0.00 46.43 2.93
3672 4052 8.641499 TTTTGAAATAGTTTGTGCTAAACCAG 57.359 30.769 11.75 0.00 0.00 4.00
3729 4109 7.735326 AACATATGTTTAGTACTCCCTCTGT 57.265 36.000 15.47 0.00 33.93 3.41
3730 4110 8.834004 AACATATGTTTAGTACTCCCTCTGTA 57.166 34.615 15.47 0.00 33.93 2.74
3731 4111 8.834004 ACATATGTTTAGTACTCCCTCTGTAA 57.166 34.615 1.41 0.00 0.00 2.41
3732 4112 9.263446 ACATATGTTTAGTACTCCCTCTGTAAA 57.737 33.333 1.41 0.00 0.00 2.01
3733 4113 9.751542 CATATGTTTAGTACTCCCTCTGTAAAG 57.248 37.037 0.00 0.00 0.00 1.85
3734 4114 9.710818 ATATGTTTAGTACTCCCTCTGTAAAGA 57.289 33.333 0.00 0.00 0.00 2.52
3735 4115 7.844493 TGTTTAGTACTCCCTCTGTAAAGAA 57.156 36.000 0.00 0.00 0.00 2.52
3736 4116 8.253867 TGTTTAGTACTCCCTCTGTAAAGAAA 57.746 34.615 0.00 0.00 0.00 2.52
3737 4117 8.877195 TGTTTAGTACTCCCTCTGTAAAGAAAT 58.123 33.333 0.00 0.00 0.00 2.17
3745 4125 8.425703 ACTCCCTCTGTAAAGAAATATAAGAGC 58.574 37.037 0.00 0.00 0.00 4.09
3746 4126 7.434492 TCCCTCTGTAAAGAAATATAAGAGCG 58.566 38.462 0.00 0.00 0.00 5.03
3747 4127 7.069578 TCCCTCTGTAAAGAAATATAAGAGCGT 59.930 37.037 0.00 0.00 0.00 5.07
3748 4128 7.711339 CCCTCTGTAAAGAAATATAAGAGCGTT 59.289 37.037 0.00 0.00 0.00 4.84
3749 4129 9.099454 CCTCTGTAAAGAAATATAAGAGCGTTT 57.901 33.333 0.00 0.00 0.00 3.60
3756 4136 8.788325 AAGAAATATAAGAGCGTTTTAGTGGT 57.212 30.769 0.00 0.00 0.00 4.16
3757 4137 8.421673 AGAAATATAAGAGCGTTTTAGTGGTC 57.578 34.615 0.00 0.00 0.00 4.02
3758 4138 8.258708 AGAAATATAAGAGCGTTTTAGTGGTCT 58.741 33.333 0.00 0.00 44.25 3.85
3759 4139 9.525409 GAAATATAAGAGCGTTTTAGTGGTCTA 57.475 33.333 0.00 0.00 41.74 2.59
3760 4140 9.880157 AAATATAAGAGCGTTTTAGTGGTCTAA 57.120 29.630 0.00 0.00 41.74 2.10
3761 4141 9.880157 AATATAAGAGCGTTTTAGTGGTCTAAA 57.120 29.630 0.00 0.00 41.74 1.85
3762 4142 5.919272 AAGAGCGTTTTAGTGGTCTAAAC 57.081 39.130 0.74 0.00 43.20 2.01
3763 4143 3.985925 AGAGCGTTTTAGTGGTCTAAACG 59.014 43.478 13.18 13.18 43.20 3.60
3764 4144 2.831116 GCGTTTTAGTGGTCTAAACGC 58.169 47.619 22.68 22.68 45.80 4.84
3765 4145 2.477754 GCGTTTTAGTGGTCTAAACGCT 59.522 45.455 27.01 5.19 46.70 5.07
3766 4146 3.422732 GCGTTTTAGTGGTCTAAACGCTC 60.423 47.826 27.01 8.46 46.70 5.03
3767 4147 3.985925 CGTTTTAGTGGTCTAAACGCTCT 59.014 43.478 0.00 0.00 43.20 4.09
3768 4148 4.446719 CGTTTTAGTGGTCTAAACGCTCTT 59.553 41.667 0.00 0.00 43.20 2.85
3769 4149 5.630680 CGTTTTAGTGGTCTAAACGCTCTTA 59.369 40.000 0.00 0.00 43.20 2.10
3770 4150 6.309737 CGTTTTAGTGGTCTAAACGCTCTTAT 59.690 38.462 0.00 0.00 43.20 1.73
3771 4151 7.485913 CGTTTTAGTGGTCTAAACGCTCTTATA 59.514 37.037 0.00 0.00 43.20 0.98
3772 4152 9.310716 GTTTTAGTGGTCTAAACGCTCTTATAT 57.689 33.333 0.74 0.00 43.20 0.86
3773 4153 9.880157 TTTTAGTGGTCTAAACGCTCTTATATT 57.120 29.630 0.74 0.00 43.20 1.28
3774 4154 9.880157 TTTAGTGGTCTAAACGCTCTTATATTT 57.120 29.630 0.00 0.00 40.05 1.40
3775 4155 9.525409 TTAGTGGTCTAAACGCTCTTATATTTC 57.475 33.333 0.00 0.00 33.79 2.17
3776 4156 7.783042 AGTGGTCTAAACGCTCTTATATTTCT 58.217 34.615 0.00 0.00 0.00 2.52
3777 4157 8.258708 AGTGGTCTAAACGCTCTTATATTTCTT 58.741 33.333 0.00 0.00 0.00 2.52
3778 4158 8.880750 GTGGTCTAAACGCTCTTATATTTCTTT 58.119 33.333 0.00 0.00 0.00 2.52
3782 4162 9.241317 TCTAAACGCTCTTATATTTCTTTACGG 57.759 33.333 0.00 0.00 0.00 4.02
3783 4163 9.241317 CTAAACGCTCTTATATTTCTTTACGGA 57.759 33.333 0.00 0.00 0.00 4.69
3784 4164 7.695869 AACGCTCTTATATTTCTTTACGGAG 57.304 36.000 0.00 0.00 0.00 4.63
3785 4165 6.214399 ACGCTCTTATATTTCTTTACGGAGG 58.786 40.000 0.00 0.00 0.00 4.30
3786 4166 5.634020 CGCTCTTATATTTCTTTACGGAGGG 59.366 44.000 0.00 0.00 0.00 4.30
3808 4188 6.783482 AGGGAGTAACTTGGAGTAATAGATCC 59.217 42.308 0.00 0.00 36.05 3.36
3834 4214 6.220930 TCAGAATGTTTCTTAACTACTGCGT 58.779 36.000 0.00 0.00 38.11 5.24
3836 4216 7.868922 TCAGAATGTTTCTTAACTACTGCGTAA 59.131 33.333 0.00 0.00 38.11 3.18
3837 4217 7.950496 CAGAATGTTTCTTAACTACTGCGTAAC 59.050 37.037 0.00 0.00 38.11 2.50
3838 4218 7.871463 AGAATGTTTCTTAACTACTGCGTAACT 59.129 33.333 0.00 0.00 36.36 2.24
3839 4219 6.758593 TGTTTCTTAACTACTGCGTAACTG 57.241 37.500 0.00 0.00 35.24 3.16
3840 4220 5.176223 TGTTTCTTAACTACTGCGTAACTGC 59.824 40.000 0.00 0.00 35.24 4.40
3845 4225 0.456142 CTACTGCGTAACTGCGAGCA 60.456 55.000 0.00 0.00 37.81 4.26
3853 4233 3.179830 CGTAACTGCGAGCACTAATTCT 58.820 45.455 0.00 0.00 0.00 2.40
3859 4239 2.029020 TGCGAGCACTAATTCTCACTGT 60.029 45.455 0.00 0.00 0.00 3.55
3861 4241 4.174009 GCGAGCACTAATTCTCACTGTTA 58.826 43.478 0.00 0.00 0.00 2.41
3902 4282 8.470002 AGAAACATGTTTTAGTTCTTTTCTGCT 58.530 29.630 24.02 9.04 32.27 4.24
3908 4288 6.377146 TGTTTTAGTTCTTTTCTGCTCCAACT 59.623 34.615 0.00 0.00 0.00 3.16
3912 4292 3.769739 TCTTTTCTGCTCCAACTGCTA 57.230 42.857 0.00 0.00 0.00 3.49
3946 4326 6.381420 TGGATTTGTTCTTCCAAACCTGTTAA 59.619 34.615 0.00 0.00 39.05 2.01
3947 4327 7.070571 TGGATTTGTTCTTCCAAACCTGTTAAT 59.929 33.333 0.00 0.00 39.05 1.40
3948 4328 7.931407 GGATTTGTTCTTCCAAACCTGTTAATT 59.069 33.333 0.00 0.00 37.16 1.40
3982 4362 8.604035 GCAGTTCTCTTTCATATTTCGTATCAA 58.396 33.333 0.00 0.00 0.00 2.57
3987 4367 9.981114 TCTCTTTCATATTTCGTATCAATAGCA 57.019 29.630 0.00 0.00 0.00 3.49
3989 4369 9.981114 TCTTTCATATTTCGTATCAATAGCAGA 57.019 29.630 0.00 0.00 0.00 4.26
3996 4376 7.962964 TTTCGTATCAATAGCAGATTTAGGG 57.037 36.000 0.00 0.00 0.00 3.53
3997 4377 6.911250 TCGTATCAATAGCAGATTTAGGGA 57.089 37.500 0.00 0.00 0.00 4.20
3998 4378 7.297936 TCGTATCAATAGCAGATTTAGGGAA 57.702 36.000 0.00 0.00 0.00 3.97
3999 4379 7.378966 TCGTATCAATAGCAGATTTAGGGAAG 58.621 38.462 0.00 0.00 0.00 3.46
4000 4380 7.232737 TCGTATCAATAGCAGATTTAGGGAAGA 59.767 37.037 0.00 0.00 0.00 2.87
4001 4381 7.329717 CGTATCAATAGCAGATTTAGGGAAGAC 59.670 40.741 0.00 0.00 0.00 3.01
4002 4382 5.930135 TCAATAGCAGATTTAGGGAAGACC 58.070 41.667 0.00 0.00 40.67 3.85
4019 4399 8.354711 GGGAAGACCTGAAAATTTATTCTTCT 57.645 34.615 17.63 6.49 38.26 2.85
4020 4400 8.246871 GGGAAGACCTGAAAATTTATTCTTCTG 58.753 37.037 17.63 6.82 38.26 3.02
4021 4401 8.797438 GGAAGACCTGAAAATTTATTCTTCTGT 58.203 33.333 17.63 5.40 38.26 3.41
4042 4422 9.871238 TTCTGTTATTACTCCACTAATTCTCAC 57.129 33.333 0.00 0.00 0.00 3.51
4043 4423 9.256228 TCTGTTATTACTCCACTAATTCTCACT 57.744 33.333 0.00 0.00 0.00 3.41
4044 4424 9.307121 CTGTTATTACTCCACTAATTCTCACTG 57.693 37.037 0.00 0.00 0.00 3.66
4045 4425 9.031537 TGTTATTACTCCACTAATTCTCACTGA 57.968 33.333 0.00 0.00 0.00 3.41
4051 4431 8.311395 ACTCCACTAATTCTCACTGATATTCA 57.689 34.615 0.00 0.00 0.00 2.57
4052 4432 8.200792 ACTCCACTAATTCTCACTGATATTCAC 58.799 37.037 0.00 0.00 0.00 3.18
4053 4433 8.078060 TCCACTAATTCTCACTGATATTCACA 57.922 34.615 0.00 0.00 0.00 3.58
4054 4434 8.539544 TCCACTAATTCTCACTGATATTCACAA 58.460 33.333 0.00 0.00 0.00 3.33
4055 4435 9.166173 CCACTAATTCTCACTGATATTCACAAA 57.834 33.333 0.00 0.00 0.00 2.83
4061 4441 8.948631 TTCTCACTGATATTCACAAATACTCC 57.051 34.615 0.00 0.00 30.27 3.85
4062 4442 7.203218 TCTCACTGATATTCACAAATACTCCG 58.797 38.462 0.00 0.00 30.27 4.63
4063 4443 6.873997 TCACTGATATTCACAAATACTCCGT 58.126 36.000 0.00 0.00 30.27 4.69
4064 4444 6.978659 TCACTGATATTCACAAATACTCCGTC 59.021 38.462 0.00 0.00 30.27 4.79
4065 4445 6.201044 CACTGATATTCACAAATACTCCGTCC 59.799 42.308 0.00 0.00 30.27 4.79
4066 4446 5.286438 TGATATTCACAAATACTCCGTCCG 58.714 41.667 0.00 0.00 30.27 4.79
4067 4447 3.604875 ATTCACAAATACTCCGTCCGT 57.395 42.857 0.00 0.00 0.00 4.69
4068 4448 4.724074 ATTCACAAATACTCCGTCCGTA 57.276 40.909 0.00 0.00 0.00 4.02
4069 4449 3.770263 TCACAAATACTCCGTCCGTAG 57.230 47.619 0.00 0.00 0.00 3.51
4070 4450 2.159338 TCACAAATACTCCGTCCGTAGC 60.159 50.000 0.00 0.00 0.00 3.58
4071 4451 2.097825 ACAAATACTCCGTCCGTAGCT 58.902 47.619 0.00 0.00 0.00 3.32
4072 4452 2.494870 ACAAATACTCCGTCCGTAGCTT 59.505 45.455 0.00 0.00 0.00 3.74
4073 4453 2.858344 CAAATACTCCGTCCGTAGCTTG 59.142 50.000 0.00 0.00 0.00 4.01
4074 4454 2.048444 ATACTCCGTCCGTAGCTTGA 57.952 50.000 0.00 0.00 0.00 3.02
4075 4455 1.825090 TACTCCGTCCGTAGCTTGAA 58.175 50.000 0.00 0.00 0.00 2.69
4076 4456 0.963962 ACTCCGTCCGTAGCTTGAAA 59.036 50.000 0.00 0.00 0.00 2.69
4077 4457 1.342174 ACTCCGTCCGTAGCTTGAAAA 59.658 47.619 0.00 0.00 0.00 2.29
4078 4458 2.224113 ACTCCGTCCGTAGCTTGAAAAA 60.224 45.455 0.00 0.00 0.00 1.94
4079 4459 2.137523 TCCGTCCGTAGCTTGAAAAAC 58.862 47.619 0.00 0.00 0.00 2.43
4080 4460 1.136446 CCGTCCGTAGCTTGAAAAACG 60.136 52.381 0.00 0.00 35.20 3.60
4081 4461 1.788308 CGTCCGTAGCTTGAAAAACGA 59.212 47.619 6.04 0.00 37.53 3.85
4082 4462 2.410730 CGTCCGTAGCTTGAAAAACGAT 59.589 45.455 6.04 0.00 37.53 3.73
4083 4463 3.481467 CGTCCGTAGCTTGAAAAACGATC 60.481 47.826 6.04 0.00 37.53 3.69
4084 4464 3.678548 GTCCGTAGCTTGAAAAACGATCT 59.321 43.478 6.04 0.00 37.53 2.75
4085 4465 4.151867 GTCCGTAGCTTGAAAAACGATCTT 59.848 41.667 6.04 0.00 37.53 2.40
4086 4466 5.346822 GTCCGTAGCTTGAAAAACGATCTTA 59.653 40.000 6.04 0.00 37.53 2.10
4087 4467 6.035758 GTCCGTAGCTTGAAAAACGATCTTAT 59.964 38.462 6.04 0.00 37.53 1.73
4088 4468 7.221452 GTCCGTAGCTTGAAAAACGATCTTATA 59.779 37.037 6.04 0.00 37.53 0.98
4089 4469 7.924412 TCCGTAGCTTGAAAAACGATCTTATAT 59.076 33.333 6.04 0.00 37.53 0.86
4090 4470 8.548721 CCGTAGCTTGAAAAACGATCTTATATT 58.451 33.333 6.04 0.00 37.53 1.28
4091 4471 9.358123 CGTAGCTTGAAAAACGATCTTATATTG 57.642 33.333 0.00 0.00 37.53 1.90
4094 4474 8.184192 AGCTTGAAAAACGATCTTATATTGTGG 58.816 33.333 0.00 0.00 0.00 4.17
4095 4475 7.432252 GCTTGAAAAACGATCTTATATTGTGGG 59.568 37.037 0.00 0.00 0.00 4.61
4096 4476 8.568676 TTGAAAAACGATCTTATATTGTGGGA 57.431 30.769 0.00 0.00 0.00 4.37
4097 4477 7.981142 TGAAAAACGATCTTATATTGTGGGAC 58.019 34.615 0.00 0.00 0.00 4.46
4098 4478 6.598753 AAAACGATCTTATATTGTGGGACG 57.401 37.500 0.00 0.00 0.00 4.79
4099 4479 4.252971 ACGATCTTATATTGTGGGACGG 57.747 45.455 0.00 0.00 0.00 4.79
4100 4480 3.893200 ACGATCTTATATTGTGGGACGGA 59.107 43.478 0.00 0.00 0.00 4.69
4101 4481 4.022242 ACGATCTTATATTGTGGGACGGAG 60.022 45.833 0.00 0.00 0.00 4.63
4102 4482 4.618460 CGATCTTATATTGTGGGACGGAGG 60.618 50.000 0.00 0.00 0.00 4.30
4103 4483 2.969950 TCTTATATTGTGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
4104 4484 2.779429 TATATTGTGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
4105 4485 1.424638 ATATTGTGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
4106 4486 0.042131 TATTGTGGGACGGAGGGAGT 59.958 55.000 0.00 0.00 0.00 3.85
4107 4487 0.042131 ATTGTGGGACGGAGGGAGTA 59.958 55.000 0.00 0.00 0.00 2.59
4108 4488 0.613853 TTGTGGGACGGAGGGAGTAG 60.614 60.000 0.00 0.00 0.00 2.57
4109 4489 1.305623 GTGGGACGGAGGGAGTAGA 59.694 63.158 0.00 0.00 0.00 2.59
4110 4490 0.324091 GTGGGACGGAGGGAGTAGAA 60.324 60.000 0.00 0.00 0.00 2.10
4111 4491 0.410663 TGGGACGGAGGGAGTAGAAA 59.589 55.000 0.00 0.00 0.00 2.52
4112 4492 1.203212 TGGGACGGAGGGAGTAGAAAA 60.203 52.381 0.00 0.00 0.00 2.29
4113 4493 1.481363 GGGACGGAGGGAGTAGAAAAG 59.519 57.143 0.00 0.00 0.00 2.27
4114 4494 2.454538 GGACGGAGGGAGTAGAAAAGA 58.545 52.381 0.00 0.00 0.00 2.52
4115 4495 2.830321 GGACGGAGGGAGTAGAAAAGAA 59.170 50.000 0.00 0.00 0.00 2.52
4116 4496 3.260128 GGACGGAGGGAGTAGAAAAGAAA 59.740 47.826 0.00 0.00 0.00 2.52
4117 4497 4.262765 GGACGGAGGGAGTAGAAAAGAAAA 60.263 45.833 0.00 0.00 0.00 2.29
4118 4498 5.300411 ACGGAGGGAGTAGAAAAGAAAAA 57.700 39.130 0.00 0.00 0.00 1.94
4119 4499 5.877491 ACGGAGGGAGTAGAAAAGAAAAAT 58.123 37.500 0.00 0.00 0.00 1.82
4120 4500 5.705905 ACGGAGGGAGTAGAAAAGAAAAATG 59.294 40.000 0.00 0.00 0.00 2.32
4121 4501 5.705905 CGGAGGGAGTAGAAAAGAAAAATGT 59.294 40.000 0.00 0.00 0.00 2.71
4122 4502 6.206829 CGGAGGGAGTAGAAAAGAAAAATGTT 59.793 38.462 0.00 0.00 0.00 2.71
4123 4503 7.371159 GGAGGGAGTAGAAAAGAAAAATGTTG 58.629 38.462 0.00 0.00 0.00 3.33
4124 4504 7.014326 GGAGGGAGTAGAAAAGAAAAATGTTGT 59.986 37.037 0.00 0.00 0.00 3.32
4125 4505 8.990163 AGGGAGTAGAAAAGAAAAATGTTGTA 57.010 30.769 0.00 0.00 0.00 2.41
4126 4506 9.067986 AGGGAGTAGAAAAGAAAAATGTTGTAG 57.932 33.333 0.00 0.00 0.00 2.74
4127 4507 8.847196 GGGAGTAGAAAAGAAAAATGTTGTAGT 58.153 33.333 0.00 0.00 0.00 2.73
4137 4517 8.634475 AGAAAAATGTTGTAGTTCTTTTCTGC 57.366 30.769 6.77 0.00 40.05 4.26
4138 4518 7.706607 AGAAAAATGTTGTAGTTCTTTTCTGCC 59.293 33.333 6.77 0.00 40.05 4.85
4139 4519 5.453567 AATGTTGTAGTTCTTTTCTGCCC 57.546 39.130 0.00 0.00 0.00 5.36
4140 4520 3.219281 TGTTGTAGTTCTTTTCTGCCCC 58.781 45.455 0.00 0.00 0.00 5.80
4141 4521 3.219281 GTTGTAGTTCTTTTCTGCCCCA 58.781 45.455 0.00 0.00 0.00 4.96
4142 4522 3.140325 TGTAGTTCTTTTCTGCCCCAG 57.860 47.619 0.00 0.00 0.00 4.45
4143 4523 1.813178 GTAGTTCTTTTCTGCCCCAGC 59.187 52.381 0.00 0.00 40.48 4.85
4144 4524 0.540597 AGTTCTTTTCTGCCCCAGCC 60.541 55.000 0.00 0.00 38.69 4.85
4145 4525 1.603455 TTCTTTTCTGCCCCAGCCG 60.603 57.895 0.00 0.00 38.69 5.52
4146 4526 3.752339 CTTTTCTGCCCCAGCCGC 61.752 66.667 0.00 0.00 38.69 6.53
4147 4527 4.284550 TTTTCTGCCCCAGCCGCT 62.285 61.111 0.00 0.00 38.69 5.52
4152 4532 4.912395 TGCCCCAGCCGCTGTTTT 62.912 61.111 18.98 0.00 38.69 2.43
4153 4533 4.362476 GCCCCAGCCGCTGTTTTG 62.362 66.667 18.98 3.64 0.00 2.44
4154 4534 2.597217 CCCCAGCCGCTGTTTTGA 60.597 61.111 18.98 0.00 0.00 2.69
4155 4535 2.199652 CCCCAGCCGCTGTTTTGAA 61.200 57.895 18.98 0.00 0.00 2.69
4156 4536 1.007387 CCCAGCCGCTGTTTTGAAC 60.007 57.895 18.98 0.00 0.00 3.18
4157 4537 1.732917 CCAGCCGCTGTTTTGAACA 59.267 52.632 18.98 0.00 39.52 3.18
4179 4559 6.633856 ACAGAATTTGTTCTTTCAAAGCTGT 58.366 32.000 16.74 16.74 43.47 4.40
4180 4560 7.099120 ACAGAATTTGTTCTTTCAAAGCTGTT 58.901 30.769 16.74 2.11 44.46 3.16
4181 4561 8.250332 ACAGAATTTGTTCTTTCAAAGCTGTTA 58.750 29.630 16.74 0.00 44.46 2.41
4182 4562 9.252962 CAGAATTTGTTCTTTCAAAGCTGTTAT 57.747 29.630 0.00 0.00 40.00 1.89
4186 4566 8.574196 TTTGTTCTTTCAAAGCTGTTATAAGC 57.426 30.769 0.00 0.00 43.88 3.09
4187 4567 7.270757 TGTTCTTTCAAAGCTGTTATAAGCA 57.729 32.000 0.00 0.00 46.08 3.91
4188 4568 7.362662 TGTTCTTTCAAAGCTGTTATAAGCAG 58.637 34.615 0.00 9.42 46.08 4.24
4189 4569 7.013274 TGTTCTTTCAAAGCTGTTATAAGCAGT 59.987 33.333 13.21 2.80 46.08 4.40
4190 4570 7.510549 TCTTTCAAAGCTGTTATAAGCAGTT 57.489 32.000 13.21 7.39 46.08 3.16
4191 4571 7.584987 TCTTTCAAAGCTGTTATAAGCAGTTC 58.415 34.615 13.21 2.78 46.08 3.01
4192 4572 6.875948 TTCAAAGCTGTTATAAGCAGTTCA 57.124 33.333 13.21 0.00 46.08 3.18
4193 4573 6.241207 TCAAAGCTGTTATAAGCAGTTCAC 57.759 37.500 13.21 2.05 46.08 3.18
4194 4574 5.997746 TCAAAGCTGTTATAAGCAGTTCACT 59.002 36.000 13.21 3.66 46.08 3.41
4195 4575 6.486657 TCAAAGCTGTTATAAGCAGTTCACTT 59.513 34.615 13.21 7.68 46.08 3.16
4196 4576 6.884280 AAGCTGTTATAAGCAGTTCACTTT 57.116 33.333 13.21 0.00 46.08 2.66
4197 4577 6.487689 AGCTGTTATAAGCAGTTCACTTTC 57.512 37.500 13.21 0.35 46.08 2.62
4198 4578 5.997746 AGCTGTTATAAGCAGTTCACTTTCA 59.002 36.000 13.21 0.00 46.08 2.69
4199 4579 6.656693 AGCTGTTATAAGCAGTTCACTTTCAT 59.343 34.615 13.21 0.00 46.08 2.57
4200 4580 7.824289 AGCTGTTATAAGCAGTTCACTTTCATA 59.176 33.333 13.21 0.00 46.08 2.15
4201 4581 8.616076 GCTGTTATAAGCAGTTCACTTTCATAT 58.384 33.333 13.21 0.00 43.01 1.78
4206 4586 6.560253 AAGCAGTTCACTTTCATATTTCGT 57.440 33.333 0.00 0.00 0.00 3.85
4207 4587 7.667043 AAGCAGTTCACTTTCATATTTCGTA 57.333 32.000 0.00 0.00 0.00 3.43
4208 4588 7.849804 AGCAGTTCACTTTCATATTTCGTAT 57.150 32.000 0.00 0.00 0.00 3.06
4209 4589 7.910304 AGCAGTTCACTTTCATATTTCGTATC 58.090 34.615 0.00 0.00 0.00 2.24
4210 4590 7.549134 AGCAGTTCACTTTCATATTTCGTATCA 59.451 33.333 0.00 0.00 0.00 2.15
4336 4718 3.607741 TCTACTGAGGAACGTCGAAGAT 58.392 45.455 5.05 0.00 40.67 2.40
4354 4736 0.460284 ATGACTACTTTGCCGCTCCG 60.460 55.000 0.00 0.00 0.00 4.63
4366 4748 4.103103 GCTCCGCAAAGTTCGCCC 62.103 66.667 0.00 0.00 0.00 6.13
4367 4749 3.788766 CTCCGCAAAGTTCGCCCG 61.789 66.667 0.00 0.00 0.00 6.13
4381 4763 4.838152 CCCGCCACACCCTGATCG 62.838 72.222 0.00 0.00 0.00 3.69
4386 4768 0.178068 GCCACACCCTGATCGTACAT 59.822 55.000 0.00 0.00 0.00 2.29
4389 4771 2.093711 CCACACCCTGATCGTACATTCA 60.094 50.000 0.00 0.00 0.00 2.57
4415 4797 3.500680 TCAAGTCCAAATACTTTGACCGC 59.499 43.478 1.28 0.00 43.26 5.68
4422 4804 4.142816 CCAAATACTTTGACCGCAGAAGAG 60.143 45.833 1.28 0.00 43.26 2.85
4423 4805 4.537135 AATACTTTGACCGCAGAAGAGA 57.463 40.909 0.00 0.00 0.00 3.10
4434 4816 1.273886 GCAGAAGAGAAAGTCCTCGGT 59.726 52.381 0.00 0.00 38.19 4.69
4443 4825 3.005578 AGAAAGTCCTCGGTCACTTGTAC 59.994 47.826 0.00 0.00 33.01 2.90
4445 4827 2.313317 AGTCCTCGGTCACTTGTACAA 58.687 47.619 8.28 8.28 0.00 2.41
4447 4829 3.133362 AGTCCTCGGTCACTTGTACAAAA 59.867 43.478 10.03 0.00 0.00 2.44
4448 4830 3.872771 GTCCTCGGTCACTTGTACAAAAA 59.127 43.478 10.03 0.00 0.00 1.94
4449 4831 4.025145 GTCCTCGGTCACTTGTACAAAAAG 60.025 45.833 10.03 0.26 0.00 2.27
4450 4832 3.250040 CCTCGGTCACTTGTACAAAAAGG 59.750 47.826 10.03 0.25 0.00 3.11
4452 4834 4.515361 TCGGTCACTTGTACAAAAAGGAA 58.485 39.130 10.03 0.00 0.00 3.36
4453 4835 4.573201 TCGGTCACTTGTACAAAAAGGAAG 59.427 41.667 10.03 0.00 0.00 3.46
4454 4836 4.573201 CGGTCACTTGTACAAAAAGGAAGA 59.427 41.667 10.03 0.13 0.00 2.87
4455 4837 5.277345 CGGTCACTTGTACAAAAAGGAAGAG 60.277 44.000 10.03 0.00 0.00 2.85
4456 4838 5.820947 GGTCACTTGTACAAAAAGGAAGAGA 59.179 40.000 10.03 0.00 0.00 3.10
4457 4839 6.017852 GGTCACTTGTACAAAAAGGAAGAGAG 60.018 42.308 10.03 0.00 0.00 3.20
4458 4840 6.761714 GTCACTTGTACAAAAAGGAAGAGAGA 59.238 38.462 10.03 0.00 0.00 3.10
4469 4851 2.902486 AGGAAGAGAGATGTGAGTTGCA 59.098 45.455 0.00 0.00 0.00 4.08
4475 4857 0.035317 AGATGTGAGTTGCAGCGGAA 59.965 50.000 0.00 0.00 0.00 4.30
4480 4862 1.135859 GTGAGTTGCAGCGGAATCTTG 60.136 52.381 0.00 0.00 0.00 3.02
4514 4896 0.593128 CTGGCGGTTTTGGTTGAGAG 59.407 55.000 0.00 0.00 0.00 3.20
4577 4959 7.776969 ACGTACATAGGAACCTGTCTAGATTTA 59.223 37.037 3.36 0.00 0.00 1.40
4580 4962 8.196378 ACATAGGAACCTGTCTAGATTTATCC 57.804 38.462 3.36 1.24 0.00 2.59
4583 4965 7.510675 AGGAACCTGTCTAGATTTATCCAAA 57.489 36.000 13.59 0.00 0.00 3.28
4586 4968 7.610305 GGAACCTGTCTAGATTTATCCAAACAA 59.390 37.037 0.00 0.00 0.00 2.83
4587 4969 9.178758 GAACCTGTCTAGATTTATCCAAACAAT 57.821 33.333 0.00 0.00 0.00 2.71
4601 4983 9.967451 TTATCCAAACAATTCATACTAGGAACA 57.033 29.630 0.00 0.00 0.00 3.18
4602 4984 7.921786 TCCAAACAATTCATACTAGGAACAG 57.078 36.000 0.00 0.00 0.00 3.16
4607 4989 9.614792 AAACAATTCATACTAGGAACAGGATAC 57.385 33.333 0.00 0.00 0.00 2.24
4726 5111 7.814264 ATATTTCTCCTTGTGATTAGGCTTG 57.186 36.000 0.00 0.00 32.59 4.01
4731 5116 2.019984 CTTGTGATTAGGCTTGAGGGC 58.980 52.381 0.00 0.00 41.20 5.19
4735 5120 0.250081 GATTAGGCTTGAGGGCGGAG 60.250 60.000 0.00 0.00 45.89 4.63
4760 5145 4.691916 CGATGCACGGTTCGATTTCGAC 62.692 54.545 1.47 0.00 42.39 4.20
4821 5210 5.243426 TGTTGAGCTTAGTTTTGGTTGAC 57.757 39.130 0.00 0.00 0.00 3.18
4846 5263 4.904251 AGATGTATACATTCAGTGGAGGCT 59.096 41.667 19.19 5.35 36.57 4.58
4847 5264 4.672587 TGTATACATTCAGTGGAGGCTC 57.327 45.455 5.78 5.78 0.00 4.70
4848 5265 3.388024 TGTATACATTCAGTGGAGGCTCC 59.612 47.826 26.95 26.95 36.96 4.70
4849 5266 1.951209 TACATTCAGTGGAGGCTCCA 58.049 50.000 32.01 32.01 45.98 3.86
4850 5267 7.663830 ATGTATACATTCAGTGGAGGCTCCAT 61.664 42.308 36.94 22.21 40.38 3.41
4955 5372 1.915614 GCACACATCTCGGCAGGTTG 61.916 60.000 0.00 0.00 0.00 3.77
5026 5443 0.962356 CTGGACCATGGGCAGTTGTC 60.962 60.000 22.13 3.56 0.00 3.18
5056 5491 1.463444 GCTACTACAAAACTGGCACCG 59.537 52.381 0.00 0.00 0.00 4.94
5073 5508 2.355481 GAACGCGTGAACGAGGGT 60.355 61.111 14.98 0.00 43.37 4.34
5171 5606 4.104417 GTCGCGGTGCTCTCGTCT 62.104 66.667 6.13 0.00 0.00 4.18
5192 5627 3.827898 CTCCTCGTCCACCTCGCC 61.828 72.222 0.00 0.00 0.00 5.54
5227 5662 3.072468 CAAGGACCTCCGCCGGTA 61.072 66.667 1.63 0.00 42.08 4.02
5328 5763 1.448540 GACCTCGTCCTCGTCGGTA 60.449 63.158 0.00 0.00 40.01 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
334 336 3.407424 TGCTAAGTCATTGTGCAGAGT 57.593 42.857 0.00 0.00 0.00 3.24
357 359 0.034089 GCACCCCAGACTGCCTAATT 60.034 55.000 0.00 0.00 0.00 1.40
358 360 1.207488 TGCACCCCAGACTGCCTAAT 61.207 55.000 0.00 0.00 31.97 1.73
602 622 4.729918 CTGGGTGGCTGGCTGGAC 62.730 72.222 2.00 0.00 0.00 4.02
806 854 3.491652 GCCCGCTTGTCTCTTCGC 61.492 66.667 0.00 0.00 0.00 4.70
807 855 3.181967 CGCCCGCTTGTCTCTTCG 61.182 66.667 0.00 0.00 0.00 3.79
810 858 3.764466 CTCCGCCCGCTTGTCTCT 61.764 66.667 0.00 0.00 0.00 3.10
908 979 2.032302 CGAACGCAGATAGCTAGACAGT 59.968 50.000 0.00 0.00 42.61 3.55
984 1060 4.565850 ATCGCCTCCCCTCCCCTC 62.566 72.222 0.00 0.00 0.00 4.30
985 1061 4.888325 CATCGCCTCCCCTCCCCT 62.888 72.222 0.00 0.00 0.00 4.79
1127 1213 2.040148 GGGGTAGGGTAGGGTGGG 60.040 72.222 0.00 0.00 0.00 4.61
1128 1214 2.040148 GGGGGTAGGGTAGGGTGG 60.040 72.222 0.00 0.00 0.00 4.61
1129 1215 1.691689 GTGGGGGTAGGGTAGGGTG 60.692 68.421 0.00 0.00 0.00 4.61
1133 1219 3.159347 GGCGTGGGGGTAGGGTAG 61.159 72.222 0.00 0.00 0.00 3.18
1134 1220 4.008669 TGGCGTGGGGGTAGGGTA 62.009 66.667 0.00 0.00 0.00 3.69
1247 1564 3.623060 CCGTGAGATTCGAAATTGACCAT 59.377 43.478 0.00 0.00 0.00 3.55
1290 1607 2.328099 CCGAAGCACTGGTTGGCTC 61.328 63.158 0.00 0.00 40.01 4.70
1390 1711 3.131478 CCCGGTCCAAATCACGCC 61.131 66.667 0.00 0.00 0.00 5.68
1392 1713 3.496131 CGCCCGGTCCAAATCACG 61.496 66.667 0.00 0.00 0.00 4.35
1423 1745 3.730662 GCGCAGAAGTTTGACTTTTGACA 60.731 43.478 13.54 0.00 41.30 3.58
1438 1760 2.899838 AACAACCGCAGCGCAGAA 60.900 55.556 11.47 0.00 0.00 3.02
1534 1860 6.074648 AGTTGTACCCCATTTCTTGATTGAA 58.925 36.000 0.00 0.00 0.00 2.69
1540 1866 7.045126 TGTTAAAGTTGTACCCCATTTCTTG 57.955 36.000 0.00 0.00 0.00 3.02
1542 1868 7.007723 TGATGTTAAAGTTGTACCCCATTTCT 58.992 34.615 0.00 0.00 0.00 2.52
1543 1869 7.222000 TGATGTTAAAGTTGTACCCCATTTC 57.778 36.000 0.00 0.00 0.00 2.17
1545 1871 7.007723 TCTTGATGTTAAAGTTGTACCCCATT 58.992 34.615 0.00 0.00 0.00 3.16
1546 1872 6.548321 TCTTGATGTTAAAGTTGTACCCCAT 58.452 36.000 0.00 0.00 0.00 4.00
1547 1873 5.942961 TCTTGATGTTAAAGTTGTACCCCA 58.057 37.500 0.00 0.00 0.00 4.96
1548 1874 6.887626 TTCTTGATGTTAAAGTTGTACCCC 57.112 37.500 0.00 0.00 0.00 4.95
1550 1876 9.191995 CCAATTTCTTGATGTTAAAGTTGTACC 57.808 33.333 0.00 0.00 34.04 3.34
1565 1905 9.439461 TCTCTCTATTCCTATCCAATTTCTTGA 57.561 33.333 0.00 0.00 34.04 3.02
1574 1914 4.749048 TGGCTCTCTCTATTCCTATCCA 57.251 45.455 0.00 0.00 0.00 3.41
1576 1916 6.606796 TCATCATGGCTCTCTCTATTCCTATC 59.393 42.308 0.00 0.00 0.00 2.08
1577 1917 6.501237 TCATCATGGCTCTCTCTATTCCTAT 58.499 40.000 0.00 0.00 0.00 2.57
1588 1932 4.880120 TGTTCATTTCTCATCATGGCTCTC 59.120 41.667 0.00 0.00 0.00 3.20
1617 1961 5.953183 TGTTCCAAAGCATAAGCATACTTG 58.047 37.500 0.00 0.00 45.49 3.16
1686 2030 1.422531 ACTGGGCTGGAAAATTTGCA 58.577 45.000 0.00 0.00 0.00 4.08
1688 2032 5.394553 GGAATCTACTGGGCTGGAAAATTTG 60.395 44.000 0.00 0.00 0.00 2.32
1689 2033 4.711846 GGAATCTACTGGGCTGGAAAATTT 59.288 41.667 0.00 0.00 0.00 1.82
1691 2035 3.269381 TGGAATCTACTGGGCTGGAAAAT 59.731 43.478 0.00 0.00 0.00 1.82
1700 2044 4.202441 CACCTTCATTGGAATCTACTGGG 58.798 47.826 0.00 0.00 31.34 4.45
1718 2062 2.885135 TCATGACATTTGAGCCACCT 57.115 45.000 0.00 0.00 0.00 4.00
1738 2086 4.696877 CAGTAAAATGTGCTGTGAGATGGA 59.303 41.667 0.00 0.00 35.38 3.41
1767 2115 8.207350 ACCCTAGACATATTGTAACTGCATAT 57.793 34.615 0.00 0.00 0.00 1.78
1791 2139 8.526978 TCATATATCTCTGATTAAGCCAGTGAC 58.473 37.037 11.94 0.00 37.10 3.67
1867 2215 7.503566 AGTGCCAATCATGCTAATTAAGTACAT 59.496 33.333 0.00 0.00 0.00 2.29
1871 2219 9.573166 TTATAGTGCCAATCATGCTAATTAAGT 57.427 29.630 0.00 0.00 0.00 2.24
1925 2276 8.856490 AACATTCGCATATAAAAATCCAGAAC 57.144 30.769 0.00 0.00 0.00 3.01
1974 2325 5.411669 GGAATTGTAGGACAGTTACCAACAG 59.588 44.000 0.00 0.00 27.73 3.16
1993 2344 8.424133 AGAAACAGAAAAATGTAAGCTGGAATT 58.576 29.630 0.00 0.00 31.70 2.17
2008 2359 5.151454 AGAGAGAGAGGGAGAAACAGAAAA 58.849 41.667 0.00 0.00 0.00 2.29
2107 2462 2.163010 CCATGGCTAACTTTGTGCAGAG 59.837 50.000 0.00 0.00 0.00 3.35
2125 2480 8.766994 AGTTGCATAACTAAATCAATACCCAT 57.233 30.769 0.00 0.00 45.07 4.00
2158 2513 6.751425 CAGCACTTGTAAATGTCAAGAAAACA 59.249 34.615 11.72 0.00 43.17 2.83
2159 2514 6.291796 GCAGCACTTGTAAATGTCAAGAAAAC 60.292 38.462 11.72 0.37 43.17 2.43
2278 2633 5.735766 TGAAACTAAGGGTTTTGGTTTTGG 58.264 37.500 3.49 0.00 46.77 3.28
2308 2664 0.741221 AAGCACGGGAGAATCGAAGC 60.741 55.000 0.00 0.00 34.37 3.86
2312 2668 0.389817 TGTCAAGCACGGGAGAATCG 60.390 55.000 0.00 0.00 34.37 3.34
2342 2698 0.675633 ACTGAACTGGCCATTTGCAC 59.324 50.000 13.85 0.00 43.89 4.57
2343 2699 0.675083 CACTGAACTGGCCATTTGCA 59.325 50.000 13.85 9.86 43.89 4.08
2344 2700 0.675633 ACACTGAACTGGCCATTTGC 59.324 50.000 13.85 5.79 40.16 3.68
2600 2957 0.826062 GAAATCCTGCCCATGGTTGG 59.174 55.000 11.73 9.64 43.23 3.77
2640 2997 7.649705 CACTACTACTATTGCCATGAGTAACAG 59.350 40.741 0.00 0.00 0.00 3.16
2687 3044 8.256605 CCCAGATATATCAGTATGTTCTTCTGG 58.743 40.741 15.08 8.92 37.40 3.86
2748 3105 6.088016 TGTGCATCTCAAAGTTAAAAGCAT 57.912 33.333 0.00 0.00 0.00 3.79
2795 3152 8.594550 ACAACCTACAAAGTAGTGATAATCAGT 58.405 33.333 3.76 0.00 33.94 3.41
2800 3157 8.369424 TGCTAACAACCTACAAAGTAGTGATAA 58.631 33.333 3.76 0.00 0.00 1.75
2900 3257 6.258727 CACAGATAACTGCGACCAGAATAAAT 59.741 38.462 0.00 0.00 46.95 1.40
3038 3395 6.055231 TCGTAAGTTGTCAAAACCTGATTG 57.945 37.500 0.00 0.00 35.73 2.67
3040 3397 6.877611 AATCGTAAGTTGTCAAAACCTGAT 57.122 33.333 0.00 0.00 35.73 2.90
3042 3399 7.749539 AAAAATCGTAAGTTGTCAAAACCTG 57.250 32.000 0.00 0.00 39.48 4.00
3066 3426 3.250744 CGAAAAGTAGCAGATCCGTGAA 58.749 45.455 0.00 0.00 0.00 3.18
3067 3427 2.230508 ACGAAAAGTAGCAGATCCGTGA 59.769 45.455 0.00 0.00 0.00 4.35
3068 3428 2.607187 ACGAAAAGTAGCAGATCCGTG 58.393 47.619 0.00 0.00 0.00 4.94
3069 3429 3.314541 AACGAAAAGTAGCAGATCCGT 57.685 42.857 0.00 0.00 0.00 4.69
3070 3430 4.421948 AGTAACGAAAAGTAGCAGATCCG 58.578 43.478 0.00 0.00 0.00 4.18
3071 3431 5.867716 TCAAGTAACGAAAAGTAGCAGATCC 59.132 40.000 0.00 0.00 0.00 3.36
3072 3432 6.946229 TCAAGTAACGAAAAGTAGCAGATC 57.054 37.500 0.00 0.00 0.00 2.75
3073 3433 7.907214 ATTCAAGTAACGAAAAGTAGCAGAT 57.093 32.000 0.00 0.00 0.00 2.90
3075 3435 7.572759 TGAATTCAAGTAACGAAAAGTAGCAG 58.427 34.615 5.45 0.00 0.00 4.24
3076 3436 7.225931 ACTGAATTCAAGTAACGAAAAGTAGCA 59.774 33.333 9.88 0.00 0.00 3.49
3077 3437 7.573627 ACTGAATTCAAGTAACGAAAAGTAGC 58.426 34.615 9.88 0.00 0.00 3.58
3078 3438 8.761497 TGACTGAATTCAAGTAACGAAAAGTAG 58.239 33.333 9.88 0.00 0.00 2.57
3079 3439 8.651391 TGACTGAATTCAAGTAACGAAAAGTA 57.349 30.769 9.88 0.00 0.00 2.24
3080 3440 7.548196 TGACTGAATTCAAGTAACGAAAAGT 57.452 32.000 9.88 0.00 0.00 2.66
3081 3441 8.835467 TTTGACTGAATTCAAGTAACGAAAAG 57.165 30.769 9.88 0.00 36.84 2.27
3082 3442 9.068008 GTTTTGACTGAATTCAAGTAACGAAAA 57.932 29.630 9.88 9.64 36.84 2.29
3086 3446 8.614994 AAAGTTTTGACTGAATTCAAGTAACG 57.385 30.769 9.88 0.00 36.84 3.18
3098 3458 9.179909 TGTGGTAGAAAATAAAGTTTTGACTGA 57.820 29.630 0.00 0.00 0.00 3.41
3099 3459 9.965824 ATGTGGTAGAAAATAAAGTTTTGACTG 57.034 29.630 0.00 0.00 0.00 3.51
3135 3511 9.628746 ATTGTAAACCAAATTGACCGTATAAAC 57.371 29.630 0.00 0.00 36.44 2.01
3140 3516 6.879276 TGATTGTAAACCAAATTGACCGTA 57.121 33.333 0.00 0.00 36.44 4.02
3141 3517 5.776173 TGATTGTAAACCAAATTGACCGT 57.224 34.783 0.00 0.00 36.44 4.83
3142 3518 7.650834 AAATGATTGTAAACCAAATTGACCG 57.349 32.000 0.00 0.00 36.44 4.79
3172 3549 6.377996 TCAGCATAGCCAGAAAACATACAAAT 59.622 34.615 0.00 0.00 0.00 2.32
3176 3553 6.382869 AATCAGCATAGCCAGAAAACATAC 57.617 37.500 0.00 0.00 0.00 2.39
3178 3555 5.927281 AAATCAGCATAGCCAGAAAACAT 57.073 34.783 0.00 0.00 0.00 2.71
3180 3557 9.237846 GTAATAAAATCAGCATAGCCAGAAAAC 57.762 33.333 0.00 0.00 0.00 2.43
3187 3564 9.023967 CAAAAGTGTAATAAAATCAGCATAGCC 57.976 33.333 0.00 0.00 0.00 3.93
3189 3566 9.571810 TGCAAAAGTGTAATAAAATCAGCATAG 57.428 29.630 0.00 0.00 0.00 2.23
3205 3582 0.395586 TCCAGTGCCTGCAAAAGTGT 60.396 50.000 0.00 0.00 0.00 3.55
3206 3583 0.963962 ATCCAGTGCCTGCAAAAGTG 59.036 50.000 0.00 0.00 0.00 3.16
3539 3916 1.346395 TGAAACCACTACCAGATGCGT 59.654 47.619 0.00 0.00 0.00 5.24
3545 3922 5.414765 GGGTAGATTTTGAAACCACTACCAG 59.585 44.000 23.00 0.00 46.45 4.00
3553 3930 5.564848 GCAGAACAGGGTAGATTTTGAAACC 60.565 44.000 0.00 0.00 0.00 3.27
3564 3941 1.065926 TGATGCAGCAGAACAGGGTAG 60.066 52.381 0.00 0.00 0.00 3.18
3601 3978 8.793592 ACTTGAAGTTATTATTTCCCTCACAAC 58.206 33.333 0.00 0.00 0.00 3.32
3603 3980 8.934023 AACTTGAAGTTATTATTTCCCTCACA 57.066 30.769 9.13 0.00 36.52 3.58
3604 3981 9.841880 GAAACTTGAAGTTATTATTTCCCTCAC 57.158 33.333 11.43 0.00 37.47 3.51
3605 3982 9.807921 AGAAACTTGAAGTTATTATTTCCCTCA 57.192 29.630 11.43 0.00 37.47 3.86
3607 3984 9.807921 TGAGAAACTTGAAGTTATTATTTCCCT 57.192 29.630 11.43 0.00 37.47 4.20
3623 4000 5.358160 AGAAAAGGGTGTCTTGAGAAACTTG 59.642 40.000 1.61 0.00 35.55 3.16
3632 4009 8.197439 ACTATTTCAAAAGAAAAGGGTGTCTTG 58.803 33.333 0.00 0.00 34.33 3.02
3646 4023 8.641499 TGGTTTAGCACAAACTATTTCAAAAG 57.359 30.769 12.10 0.00 0.00 2.27
3710 4090 8.431910 TTCTTTACAGAGGGAGTACTAAACAT 57.568 34.615 0.00 0.00 0.00 2.71
3720 4100 7.596995 CGCTCTTATATTTCTTTACAGAGGGAG 59.403 40.741 4.76 0.00 40.49 4.30
3721 4101 7.069578 ACGCTCTTATATTTCTTTACAGAGGGA 59.930 37.037 14.96 0.00 40.49 4.20
3722 4102 7.210873 ACGCTCTTATATTTCTTTACAGAGGG 58.789 38.462 8.36 8.36 42.53 4.30
3723 4103 8.649973 AACGCTCTTATATTTCTTTACAGAGG 57.350 34.615 0.00 0.00 0.00 3.69
3730 4110 9.227777 ACCACTAAAACGCTCTTATATTTCTTT 57.772 29.630 0.00 0.00 0.00 2.52
3731 4111 8.788325 ACCACTAAAACGCTCTTATATTTCTT 57.212 30.769 0.00 0.00 0.00 2.52
3732 4112 8.258708 AGACCACTAAAACGCTCTTATATTTCT 58.741 33.333 0.00 0.00 0.00 2.52
3733 4113 8.421673 AGACCACTAAAACGCTCTTATATTTC 57.578 34.615 0.00 0.00 0.00 2.17
3734 4114 9.880157 TTAGACCACTAAAACGCTCTTATATTT 57.120 29.630 0.00 0.00 35.92 1.40
3735 4115 9.880157 TTTAGACCACTAAAACGCTCTTATATT 57.120 29.630 0.00 0.00 43.02 1.28
3736 4116 9.310716 GTTTAGACCACTAAAACGCTCTTATAT 57.689 33.333 0.00 0.00 45.97 0.86
3737 4117 7.485913 CGTTTAGACCACTAAAACGCTCTTATA 59.514 37.037 6.63 0.00 45.97 0.98
3738 4118 6.309737 CGTTTAGACCACTAAAACGCTCTTAT 59.690 38.462 6.63 0.00 45.97 1.73
3739 4119 5.630680 CGTTTAGACCACTAAAACGCTCTTA 59.369 40.000 6.63 0.00 45.97 2.10
3740 4120 4.446719 CGTTTAGACCACTAAAACGCTCTT 59.553 41.667 6.63 0.00 45.97 2.85
3741 4121 3.985925 CGTTTAGACCACTAAAACGCTCT 59.014 43.478 6.63 0.00 45.97 4.09
3742 4122 4.303586 CGTTTAGACCACTAAAACGCTC 57.696 45.455 6.63 0.00 45.97 5.03
3744 4124 2.831116 GCGTTTAGACCACTAAAACGC 58.169 47.619 23.11 23.11 45.97 4.84
3745 4125 3.985925 AGAGCGTTTAGACCACTAAAACG 59.014 43.478 13.48 13.48 45.97 3.60
3746 4126 5.919272 AAGAGCGTTTAGACCACTAAAAC 57.081 39.130 0.00 0.00 45.97 2.43
3747 4127 9.880157 AATATAAGAGCGTTTAGACCACTAAAA 57.120 29.630 0.00 0.00 45.97 1.52
3748 4128 9.880157 AAATATAAGAGCGTTTAGACCACTAAA 57.120 29.630 0.00 0.00 43.52 1.85
3749 4129 9.525409 GAAATATAAGAGCGTTTAGACCACTAA 57.475 33.333 0.00 0.00 36.90 2.24
3750 4130 8.910944 AGAAATATAAGAGCGTTTAGACCACTA 58.089 33.333 0.00 0.00 0.00 2.74
3751 4131 7.783042 AGAAATATAAGAGCGTTTAGACCACT 58.217 34.615 0.00 0.00 0.00 4.00
3752 4132 8.421673 AAGAAATATAAGAGCGTTTAGACCAC 57.578 34.615 0.00 0.00 0.00 4.16
3756 4136 9.241317 CCGTAAAGAAATATAAGAGCGTTTAGA 57.759 33.333 0.00 0.00 0.00 2.10
3757 4137 9.241317 TCCGTAAAGAAATATAAGAGCGTTTAG 57.759 33.333 0.00 0.00 0.00 1.85
3758 4138 9.241317 CTCCGTAAAGAAATATAAGAGCGTTTA 57.759 33.333 0.00 0.00 0.00 2.01
3759 4139 7.224167 CCTCCGTAAAGAAATATAAGAGCGTTT 59.776 37.037 0.00 0.00 0.00 3.60
3760 4140 6.700520 CCTCCGTAAAGAAATATAAGAGCGTT 59.299 38.462 0.00 0.00 0.00 4.84
3761 4141 6.214399 CCTCCGTAAAGAAATATAAGAGCGT 58.786 40.000 0.00 0.00 0.00 5.07
3762 4142 5.634020 CCCTCCGTAAAGAAATATAAGAGCG 59.366 44.000 0.00 0.00 0.00 5.03
3763 4143 6.756221 TCCCTCCGTAAAGAAATATAAGAGC 58.244 40.000 0.00 0.00 0.00 4.09
3764 4144 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
3765 4145 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
3766 4146 9.473640 GTTACTCCCTCCGTAAAGAAATATAAG 57.526 37.037 0.00 0.00 0.00 1.73
3767 4147 9.205513 AGTTACTCCCTCCGTAAAGAAATATAA 57.794 33.333 0.00 0.00 0.00 0.98
3768 4148 8.773033 AGTTACTCCCTCCGTAAAGAAATATA 57.227 34.615 0.00 0.00 0.00 0.86
3769 4149 7.672122 AGTTACTCCCTCCGTAAAGAAATAT 57.328 36.000 0.00 0.00 0.00 1.28
3770 4150 7.325694 CAAGTTACTCCCTCCGTAAAGAAATA 58.674 38.462 0.00 0.00 0.00 1.40
3771 4151 6.171213 CAAGTTACTCCCTCCGTAAAGAAAT 58.829 40.000 0.00 0.00 0.00 2.17
3772 4152 5.511888 CCAAGTTACTCCCTCCGTAAAGAAA 60.512 44.000 0.00 0.00 0.00 2.52
3773 4153 4.020839 CCAAGTTACTCCCTCCGTAAAGAA 60.021 45.833 0.00 0.00 0.00 2.52
3774 4154 3.512724 CCAAGTTACTCCCTCCGTAAAGA 59.487 47.826 0.00 0.00 0.00 2.52
3775 4155 3.512724 TCCAAGTTACTCCCTCCGTAAAG 59.487 47.826 0.00 0.00 0.00 1.85
3776 4156 3.509442 TCCAAGTTACTCCCTCCGTAAA 58.491 45.455 0.00 0.00 0.00 2.01
3777 4157 3.094572 CTCCAAGTTACTCCCTCCGTAA 58.905 50.000 0.00 0.00 0.00 3.18
3778 4158 2.042162 ACTCCAAGTTACTCCCTCCGTA 59.958 50.000 0.00 0.00 0.00 4.02
3779 4159 1.203149 ACTCCAAGTTACTCCCTCCGT 60.203 52.381 0.00 0.00 0.00 4.69
3780 4160 1.558233 ACTCCAAGTTACTCCCTCCG 58.442 55.000 0.00 0.00 0.00 4.63
3781 4161 6.134754 TCTATTACTCCAAGTTACTCCCTCC 58.865 44.000 0.00 0.00 0.00 4.30
3782 4162 7.039574 GGATCTATTACTCCAAGTTACTCCCTC 60.040 44.444 0.00 0.00 0.00 4.30
3783 4163 6.783482 GGATCTATTACTCCAAGTTACTCCCT 59.217 42.308 0.00 0.00 0.00 4.20
3784 4164 6.553852 TGGATCTATTACTCCAAGTTACTCCC 59.446 42.308 0.00 0.00 38.59 4.30
3785 4165 7.598759 TGGATCTATTACTCCAAGTTACTCC 57.401 40.000 0.00 0.00 38.59 3.85
3786 4166 8.861086 TGATGGATCTATTACTCCAAGTTACTC 58.139 37.037 0.00 0.00 44.41 2.59
3808 4188 7.148573 ACGCAGTAGTTAAGAAACATTCTGATG 60.149 37.037 0.00 0.00 41.94 3.07
3834 4214 4.082190 AGTGAGAATTAGTGCTCGCAGTTA 60.082 41.667 9.28 0.00 42.52 2.24
3836 4216 2.232452 AGTGAGAATTAGTGCTCGCAGT 59.768 45.455 9.28 4.49 42.52 4.40
3837 4217 2.602211 CAGTGAGAATTAGTGCTCGCAG 59.398 50.000 9.28 0.00 42.52 5.18
3838 4218 2.029020 ACAGTGAGAATTAGTGCTCGCA 60.029 45.455 9.28 0.00 42.52 5.10
3839 4219 2.611518 ACAGTGAGAATTAGTGCTCGC 58.388 47.619 0.00 0.00 40.89 5.03
3840 4220 6.531594 TGAATAACAGTGAGAATTAGTGCTCG 59.468 38.462 0.00 0.00 33.89 5.03
3880 4260 6.321181 TGGAGCAGAAAAGAACTAAAACATGT 59.679 34.615 0.00 0.00 0.00 3.21
3881 4261 6.738114 TGGAGCAGAAAAGAACTAAAACATG 58.262 36.000 0.00 0.00 0.00 3.21
3902 4282 4.724399 TCCAGTTCAAAATAGCAGTTGGA 58.276 39.130 0.00 0.00 0.00 3.53
3908 4288 7.288810 AGAACAAATCCAGTTCAAAATAGCA 57.711 32.000 8.54 0.00 45.93 3.49
3912 4292 7.123355 TGGAAGAACAAATCCAGTTCAAAAT 57.877 32.000 8.54 0.00 45.93 1.82
3982 4362 5.219739 TCAGGTCTTCCCTAAATCTGCTAT 58.780 41.667 0.00 0.00 43.86 2.97
3983 4363 4.620723 TCAGGTCTTCCCTAAATCTGCTA 58.379 43.478 0.00 0.00 43.86 3.49
3984 4364 3.454858 TCAGGTCTTCCCTAAATCTGCT 58.545 45.455 0.00 0.00 43.86 4.24
3985 4365 3.914426 TCAGGTCTTCCCTAAATCTGC 57.086 47.619 0.00 0.00 43.86 4.26
3986 4366 7.709149 AATTTTCAGGTCTTCCCTAAATCTG 57.291 36.000 0.00 0.00 43.86 2.90
3987 4367 9.997172 ATAAATTTTCAGGTCTTCCCTAAATCT 57.003 29.630 0.00 0.00 43.86 2.40
3990 4370 9.822727 AGAATAAATTTTCAGGTCTTCCCTAAA 57.177 29.630 0.00 0.00 43.86 1.85
3991 4371 9.822727 AAGAATAAATTTTCAGGTCTTCCCTAA 57.177 29.630 0.00 0.00 43.86 2.69
3992 4372 9.462606 GAAGAATAAATTTTCAGGTCTTCCCTA 57.537 33.333 0.00 0.00 43.86 3.53
3994 4374 8.246871 CAGAAGAATAAATTTTCAGGTCTTCCC 58.753 37.037 16.85 0.00 40.09 3.97
3995 4375 8.797438 ACAGAAGAATAAATTTTCAGGTCTTCC 58.203 33.333 16.85 0.00 40.09 3.46
4016 4396 9.871238 GTGAGAATTAGTGGAGTAATAACAGAA 57.129 33.333 0.00 0.00 0.00 3.02
4017 4397 9.256228 AGTGAGAATTAGTGGAGTAATAACAGA 57.744 33.333 0.00 0.00 0.00 3.41
4018 4398 9.307121 CAGTGAGAATTAGTGGAGTAATAACAG 57.693 37.037 0.00 0.00 0.00 3.16
4019 4399 9.031537 TCAGTGAGAATTAGTGGAGTAATAACA 57.968 33.333 0.00 0.00 0.00 2.41
4025 4405 9.421399 TGAATATCAGTGAGAATTAGTGGAGTA 57.579 33.333 0.00 0.00 0.00 2.59
4026 4406 8.200792 GTGAATATCAGTGAGAATTAGTGGAGT 58.799 37.037 0.00 0.00 0.00 3.85
4027 4407 8.200120 TGTGAATATCAGTGAGAATTAGTGGAG 58.800 37.037 0.00 0.00 0.00 3.86
4028 4408 8.078060 TGTGAATATCAGTGAGAATTAGTGGA 57.922 34.615 0.00 0.00 0.00 4.02
4029 4409 8.722480 TTGTGAATATCAGTGAGAATTAGTGG 57.278 34.615 0.00 0.00 0.00 4.00
4035 4415 9.553064 GGAGTATTTGTGAATATCAGTGAGAAT 57.447 33.333 0.00 0.00 30.84 2.40
4036 4416 7.706607 CGGAGTATTTGTGAATATCAGTGAGAA 59.293 37.037 0.00 0.00 30.84 2.87
4037 4417 7.147897 ACGGAGTATTTGTGAATATCAGTGAGA 60.148 37.037 0.00 0.00 41.94 3.27
4038 4418 6.980978 ACGGAGTATTTGTGAATATCAGTGAG 59.019 38.462 0.00 0.00 41.94 3.51
4039 4419 6.873997 ACGGAGTATTTGTGAATATCAGTGA 58.126 36.000 0.00 0.00 41.94 3.41
4058 4438 2.074547 TTTTCAAGCTACGGACGGAG 57.925 50.000 0.00 0.00 0.00 4.63
4059 4439 2.137523 GTTTTTCAAGCTACGGACGGA 58.862 47.619 0.00 0.00 0.00 4.69
4060 4440 1.136446 CGTTTTTCAAGCTACGGACGG 60.136 52.381 0.00 0.00 0.00 4.79
4061 4441 1.788308 TCGTTTTTCAAGCTACGGACG 59.212 47.619 4.75 3.35 34.93 4.79
4062 4442 3.678548 AGATCGTTTTTCAAGCTACGGAC 59.321 43.478 4.75 0.57 34.93 4.79
4063 4443 3.921677 AGATCGTTTTTCAAGCTACGGA 58.078 40.909 4.75 0.00 34.93 4.69
4064 4444 4.663636 AAGATCGTTTTTCAAGCTACGG 57.336 40.909 4.75 0.00 34.93 4.02
4065 4445 9.358123 CAATATAAGATCGTTTTTCAAGCTACG 57.642 33.333 0.00 0.00 35.46 3.51
4068 4448 8.184192 CCACAATATAAGATCGTTTTTCAAGCT 58.816 33.333 0.00 0.00 0.00 3.74
4069 4449 7.432252 CCCACAATATAAGATCGTTTTTCAAGC 59.568 37.037 0.00 0.00 0.00 4.01
4070 4450 8.673711 TCCCACAATATAAGATCGTTTTTCAAG 58.326 33.333 0.00 0.00 0.00 3.02
4071 4451 8.455682 GTCCCACAATATAAGATCGTTTTTCAA 58.544 33.333 0.00 0.00 0.00 2.69
4072 4452 7.201574 CGTCCCACAATATAAGATCGTTTTTCA 60.202 37.037 0.00 0.00 0.00 2.69
4073 4453 7.123830 CGTCCCACAATATAAGATCGTTTTTC 58.876 38.462 0.00 0.00 0.00 2.29
4074 4454 6.037830 CCGTCCCACAATATAAGATCGTTTTT 59.962 38.462 0.00 0.00 0.00 1.94
4075 4455 5.526111 CCGTCCCACAATATAAGATCGTTTT 59.474 40.000 0.00 0.00 0.00 2.43
4076 4456 5.054477 CCGTCCCACAATATAAGATCGTTT 58.946 41.667 0.00 0.00 0.00 3.60
4077 4457 4.342951 TCCGTCCCACAATATAAGATCGTT 59.657 41.667 0.00 0.00 0.00 3.85
4078 4458 3.893200 TCCGTCCCACAATATAAGATCGT 59.107 43.478 0.00 0.00 0.00 3.73
4079 4459 4.486090 CTCCGTCCCACAATATAAGATCG 58.514 47.826 0.00 0.00 0.00 3.69
4080 4460 4.322801 CCCTCCGTCCCACAATATAAGATC 60.323 50.000 0.00 0.00 0.00 2.75
4081 4461 3.583086 CCCTCCGTCCCACAATATAAGAT 59.417 47.826 0.00 0.00 0.00 2.40
4082 4462 2.969950 CCCTCCGTCCCACAATATAAGA 59.030 50.000 0.00 0.00 0.00 2.10
4083 4463 2.969950 TCCCTCCGTCCCACAATATAAG 59.030 50.000 0.00 0.00 0.00 1.73
4084 4464 2.969950 CTCCCTCCGTCCCACAATATAA 59.030 50.000 0.00 0.00 0.00 0.98
4085 4465 2.090943 ACTCCCTCCGTCCCACAATATA 60.091 50.000 0.00 0.00 0.00 0.86
4086 4466 1.344087 ACTCCCTCCGTCCCACAATAT 60.344 52.381 0.00 0.00 0.00 1.28
4087 4467 0.042131 ACTCCCTCCGTCCCACAATA 59.958 55.000 0.00 0.00 0.00 1.90
4088 4468 0.042131 TACTCCCTCCGTCCCACAAT 59.958 55.000 0.00 0.00 0.00 2.71
4089 4469 0.613853 CTACTCCCTCCGTCCCACAA 60.614 60.000 0.00 0.00 0.00 3.33
4090 4470 1.000019 CTACTCCCTCCGTCCCACA 60.000 63.158 0.00 0.00 0.00 4.17
4091 4471 0.324091 TTCTACTCCCTCCGTCCCAC 60.324 60.000 0.00 0.00 0.00 4.61
4092 4472 0.410663 TTTCTACTCCCTCCGTCCCA 59.589 55.000 0.00 0.00 0.00 4.37
4093 4473 1.481363 CTTTTCTACTCCCTCCGTCCC 59.519 57.143 0.00 0.00 0.00 4.46
4094 4474 2.454538 TCTTTTCTACTCCCTCCGTCC 58.545 52.381 0.00 0.00 0.00 4.79
4095 4475 4.532314 TTTCTTTTCTACTCCCTCCGTC 57.468 45.455 0.00 0.00 0.00 4.79
4096 4476 4.968971 TTTTCTTTTCTACTCCCTCCGT 57.031 40.909 0.00 0.00 0.00 4.69
4097 4477 5.705905 ACATTTTTCTTTTCTACTCCCTCCG 59.294 40.000 0.00 0.00 0.00 4.63
4098 4478 7.014326 ACAACATTTTTCTTTTCTACTCCCTCC 59.986 37.037 0.00 0.00 0.00 4.30
4099 4479 7.941919 ACAACATTTTTCTTTTCTACTCCCTC 58.058 34.615 0.00 0.00 0.00 4.30
4100 4480 7.898014 ACAACATTTTTCTTTTCTACTCCCT 57.102 32.000 0.00 0.00 0.00 4.20
4101 4481 8.847196 ACTACAACATTTTTCTTTTCTACTCCC 58.153 33.333 0.00 0.00 0.00 4.30
4111 4491 9.087424 GCAGAAAAGAACTACAACATTTTTCTT 57.913 29.630 7.15 0.00 40.75 2.52
4112 4492 7.706607 GGCAGAAAAGAACTACAACATTTTTCT 59.293 33.333 4.66 4.66 42.39 2.52
4113 4493 7.042725 GGGCAGAAAAGAACTACAACATTTTTC 60.043 37.037 0.00 0.00 35.73 2.29
4114 4494 6.761242 GGGCAGAAAAGAACTACAACATTTTT 59.239 34.615 0.00 0.00 0.00 1.94
4115 4495 6.280643 GGGCAGAAAAGAACTACAACATTTT 58.719 36.000 0.00 0.00 0.00 1.82
4116 4496 5.221441 GGGGCAGAAAAGAACTACAACATTT 60.221 40.000 0.00 0.00 0.00 2.32
4117 4497 4.280929 GGGGCAGAAAAGAACTACAACATT 59.719 41.667 0.00 0.00 0.00 2.71
4118 4498 3.826729 GGGGCAGAAAAGAACTACAACAT 59.173 43.478 0.00 0.00 0.00 2.71
4119 4499 3.219281 GGGGCAGAAAAGAACTACAACA 58.781 45.455 0.00 0.00 0.00 3.33
4120 4500 3.219281 TGGGGCAGAAAAGAACTACAAC 58.781 45.455 0.00 0.00 0.00 3.32
4121 4501 3.486383 CTGGGGCAGAAAAGAACTACAA 58.514 45.455 0.00 0.00 32.44 2.41
4122 4502 2.814097 GCTGGGGCAGAAAAGAACTACA 60.814 50.000 0.00 0.00 38.54 2.74
4123 4503 1.813178 GCTGGGGCAGAAAAGAACTAC 59.187 52.381 0.00 0.00 38.54 2.73
4124 4504 1.271926 GGCTGGGGCAGAAAAGAACTA 60.272 52.381 0.00 0.00 40.87 2.24
4125 4505 0.540597 GGCTGGGGCAGAAAAGAACT 60.541 55.000 0.00 0.00 40.87 3.01
4126 4506 1.866853 CGGCTGGGGCAGAAAAGAAC 61.867 60.000 0.00 0.00 40.87 3.01
4127 4507 1.603455 CGGCTGGGGCAGAAAAGAA 60.603 57.895 0.00 0.00 40.87 2.52
4128 4508 2.034066 CGGCTGGGGCAGAAAAGA 59.966 61.111 0.00 0.00 40.87 2.52
4129 4509 3.752339 GCGGCTGGGGCAGAAAAG 61.752 66.667 0.00 0.00 40.87 2.27
4130 4510 4.284550 AGCGGCTGGGGCAGAAAA 62.285 61.111 0.00 0.00 40.87 2.29
4135 4515 4.912395 AAAACAGCGGCTGGGGCA 62.912 61.111 31.38 0.00 40.87 5.36
4136 4516 4.362476 CAAAACAGCGGCTGGGGC 62.362 66.667 31.38 0.00 35.51 5.80
4137 4517 2.199652 TTCAAAACAGCGGCTGGGG 61.200 57.895 31.38 17.93 35.51 4.96
4138 4518 1.007387 GTTCAAAACAGCGGCTGGG 60.007 57.895 31.38 18.25 35.51 4.45
4139 4519 1.732917 TGTTCAAAACAGCGGCTGG 59.267 52.632 31.38 15.28 36.25 4.85
4155 4535 6.633856 ACAGCTTTGAAAGAACAAATTCTGT 58.366 32.000 9.48 6.90 44.82 3.41
4156 4536 7.529880 AACAGCTTTGAAAGAACAAATTCTG 57.470 32.000 9.48 6.28 44.82 3.02
4160 4540 9.196552 GCTTATAACAGCTTTGAAAGAACAAAT 57.803 29.630 9.48 0.00 38.73 2.32
4161 4541 8.194104 TGCTTATAACAGCTTTGAAAGAACAAA 58.806 29.630 9.48 0.00 40.79 2.83
4162 4542 7.711846 TGCTTATAACAGCTTTGAAAGAACAA 58.288 30.769 9.48 0.00 40.79 2.83
4163 4543 7.013274 ACTGCTTATAACAGCTTTGAAAGAACA 59.987 33.333 9.48 0.00 40.79 3.18
4164 4544 7.363431 ACTGCTTATAACAGCTTTGAAAGAAC 58.637 34.615 9.48 0.00 40.79 3.01
4165 4545 7.510549 ACTGCTTATAACAGCTTTGAAAGAA 57.489 32.000 9.48 0.00 40.79 2.52
4166 4546 7.228507 TGAACTGCTTATAACAGCTTTGAAAGA 59.771 33.333 9.48 0.00 40.79 2.52
4167 4547 7.324616 GTGAACTGCTTATAACAGCTTTGAAAG 59.675 37.037 0.00 0.00 40.79 2.62
4168 4548 7.013274 AGTGAACTGCTTATAACAGCTTTGAAA 59.987 33.333 12.27 0.00 40.79 2.69
4169 4549 6.486657 AGTGAACTGCTTATAACAGCTTTGAA 59.513 34.615 12.27 0.00 40.79 2.69
4170 4550 5.997746 AGTGAACTGCTTATAACAGCTTTGA 59.002 36.000 12.27 0.00 40.79 2.69
4171 4551 6.246420 AGTGAACTGCTTATAACAGCTTTG 57.754 37.500 12.27 1.29 40.79 2.77
4172 4552 6.884280 AAGTGAACTGCTTATAACAGCTTT 57.116 33.333 12.27 4.06 40.79 3.51
4173 4553 6.486657 TGAAAGTGAACTGCTTATAACAGCTT 59.513 34.615 12.27 7.10 40.79 3.74
4174 4554 5.997746 TGAAAGTGAACTGCTTATAACAGCT 59.002 36.000 12.27 3.87 40.79 4.24
4175 4555 6.241207 TGAAAGTGAACTGCTTATAACAGC 57.759 37.500 12.27 2.97 38.79 4.40
4180 4560 9.378551 ACGAAATATGAAAGTGAACTGCTTATA 57.621 29.630 0.00 0.00 0.00 0.98
4181 4561 8.268850 ACGAAATATGAAAGTGAACTGCTTAT 57.731 30.769 0.00 0.00 0.00 1.73
4182 4562 7.667043 ACGAAATATGAAAGTGAACTGCTTA 57.333 32.000 0.00 0.00 0.00 3.09
4183 4563 6.560253 ACGAAATATGAAAGTGAACTGCTT 57.440 33.333 0.00 0.00 0.00 3.91
4184 4564 7.549134 TGATACGAAATATGAAAGTGAACTGCT 59.451 33.333 0.00 0.00 0.00 4.24
4185 4565 7.684670 TGATACGAAATATGAAAGTGAACTGC 58.315 34.615 0.00 0.00 0.00 4.40
4186 4566 8.873830 ACTGATACGAAATATGAAAGTGAACTG 58.126 33.333 0.00 0.00 0.00 3.16
4203 4583 9.443323 TCTTTCCAAAATCAAATACTGATACGA 57.557 29.630 0.00 0.00 44.43 3.43
4204 4584 9.490663 GTCTTTCCAAAATCAAATACTGATACG 57.509 33.333 0.00 0.00 44.43 3.06
4205 4585 9.788960 GGTCTTTCCAAAATCAAATACTGATAC 57.211 33.333 0.00 0.00 38.85 2.24
4206 4586 9.753674 AGGTCTTTCCAAAATCAAATACTGATA 57.246 29.630 0.00 0.00 40.38 2.15
4207 4587 8.526147 CAGGTCTTTCCAAAATCAAATACTGAT 58.474 33.333 0.00 0.00 41.92 2.90
4208 4588 7.723616 TCAGGTCTTTCCAAAATCAAATACTGA 59.276 33.333 0.00 0.00 39.02 3.41
4209 4589 7.885297 TCAGGTCTTTCCAAAATCAAATACTG 58.115 34.615 0.00 0.00 39.02 2.74
4210 4590 8.477419 TTCAGGTCTTTCCAAAATCAAATACT 57.523 30.769 0.00 0.00 39.02 2.12
4244 4624 6.860169 CCAAGTGGATGCTGCAAACAGAAG 62.860 50.000 6.36 1.61 41.48 2.85
4282 4664 6.154534 TGCCTACGCTGATATACCAAGATATT 59.845 38.462 0.00 0.00 35.36 1.28
4336 4718 1.080093 CGGAGCGGCAAAGTAGTCA 60.080 57.895 1.45 0.00 0.00 3.41
4354 4736 4.700365 GTGGCGGGCGAACTTTGC 62.700 66.667 0.00 0.00 0.00 3.68
4366 4748 1.518572 GTACGATCAGGGTGTGGCG 60.519 63.158 0.00 0.00 0.00 5.69
4367 4749 0.178068 ATGTACGATCAGGGTGTGGC 59.822 55.000 0.00 0.00 0.00 5.01
4381 4763 7.819900 AGTATTTGGACTTGACTCTGAATGTAC 59.180 37.037 0.00 0.00 0.00 2.90
4415 4797 2.558795 TGACCGAGGACTTTCTCTTCTG 59.441 50.000 0.00 0.00 0.00 3.02
4422 4804 2.528041 ACAAGTGACCGAGGACTTTC 57.472 50.000 0.00 0.00 29.73 2.62
4423 4805 2.696707 TGTACAAGTGACCGAGGACTTT 59.303 45.455 0.00 0.00 29.73 2.66
4434 4816 6.884832 TCTCTCTTCCTTTTTGTACAAGTGA 58.115 36.000 8.56 1.83 0.00 3.41
4443 4825 6.666417 CAACTCACATCTCTCTTCCTTTTTG 58.334 40.000 0.00 0.00 0.00 2.44
4445 4827 4.759183 GCAACTCACATCTCTCTTCCTTTT 59.241 41.667 0.00 0.00 0.00 2.27
4447 4829 3.326006 TGCAACTCACATCTCTCTTCCTT 59.674 43.478 0.00 0.00 0.00 3.36
4448 4830 2.902486 TGCAACTCACATCTCTCTTCCT 59.098 45.455 0.00 0.00 0.00 3.36
4449 4831 3.260740 CTGCAACTCACATCTCTCTTCC 58.739 50.000 0.00 0.00 0.00 3.46
4450 4832 2.672381 GCTGCAACTCACATCTCTCTTC 59.328 50.000 0.00 0.00 0.00 2.87
4452 4834 1.403914 CGCTGCAACTCACATCTCTCT 60.404 52.381 0.00 0.00 0.00 3.10
4453 4835 0.997932 CGCTGCAACTCACATCTCTC 59.002 55.000 0.00 0.00 0.00 3.20
4454 4836 0.390866 CCGCTGCAACTCACATCTCT 60.391 55.000 0.00 0.00 0.00 3.10
4455 4837 0.390340 TCCGCTGCAACTCACATCTC 60.390 55.000 0.00 0.00 0.00 2.75
4456 4838 0.035317 TTCCGCTGCAACTCACATCT 59.965 50.000 0.00 0.00 0.00 2.90
4457 4839 1.063174 GATTCCGCTGCAACTCACATC 59.937 52.381 0.00 0.00 0.00 3.06
4458 4840 1.089920 GATTCCGCTGCAACTCACAT 58.910 50.000 0.00 0.00 0.00 3.21
4469 4851 2.821366 CGCTGCCAAGATTCCGCT 60.821 61.111 0.00 0.00 0.00 5.52
4514 4896 2.632377 TGGCTGACGAAATCTTCATCC 58.368 47.619 3.57 3.57 32.89 3.51
4577 4959 7.557719 CCTGTTCCTAGTATGAATTGTTTGGAT 59.442 37.037 0.00 0.00 0.00 3.41
4580 4962 7.921786 TCCTGTTCCTAGTATGAATTGTTTG 57.078 36.000 0.00 0.00 0.00 2.93
4583 4965 7.434492 CGTATCCTGTTCCTAGTATGAATTGT 58.566 38.462 0.00 0.00 0.00 2.71
4586 4968 5.047235 GGCGTATCCTGTTCCTAGTATGAAT 60.047 44.000 0.00 0.00 0.00 2.57
4587 4969 4.280174 GGCGTATCCTGTTCCTAGTATGAA 59.720 45.833 0.00 0.00 0.00 2.57
4601 4983 3.537874 GACGGCAGGGCGTATCCT 61.538 66.667 20.92 0.00 37.71 3.24
4602 4984 4.603946 GGACGGCAGGGCGTATCC 62.604 72.222 20.92 14.75 0.00 2.59
4607 4989 3.508840 GAATTGGACGGCAGGGCG 61.509 66.667 13.96 13.96 0.00 6.13
4615 4997 5.212194 CAACTTACAAACTGGAATTGGACG 58.788 41.667 0.00 0.00 32.02 4.79
4726 5111 2.356793 CATCGATGCTCCGCCCTC 60.357 66.667 13.37 0.00 0.00 4.30
4760 5145 3.329386 TCTCAGAAGAAGAACAATGGCG 58.671 45.455 0.00 0.00 0.00 5.69
4785 5170 4.359706 AGCTCAACAATGAAACCGAAAAC 58.640 39.130 0.00 0.00 34.49 2.43
4786 5171 4.647424 AGCTCAACAATGAAACCGAAAA 57.353 36.364 0.00 0.00 34.49 2.29
4821 5210 5.545588 CCTCCACTGAATGTATACATCTGG 58.454 45.833 18.52 18.05 35.10 3.86
4846 5263 0.991146 TAACAGGAGGCTGCAATGGA 59.009 50.000 9.23 0.00 0.00 3.41
4847 5264 1.838112 TTAACAGGAGGCTGCAATGG 58.162 50.000 9.23 0.00 0.00 3.16
4848 5265 2.756760 ACATTAACAGGAGGCTGCAATG 59.243 45.455 9.23 11.55 36.73 2.82
4849 5266 3.091633 ACATTAACAGGAGGCTGCAAT 57.908 42.857 9.23 0.00 0.00 3.56
4850 5267 2.584835 ACATTAACAGGAGGCTGCAA 57.415 45.000 9.23 0.00 0.00 4.08
4881 5298 2.953648 TGGCAACCATATCATCAGCAAG 59.046 45.455 0.00 0.00 0.00 4.01
4955 5372 0.807496 GTTGGAACAGAGATGCAGGC 59.193 55.000 0.00 0.00 42.39 4.85
4992 5409 1.127567 TCCAGGGGACACACTCCAAG 61.128 60.000 0.00 0.00 42.78 3.61
5013 5430 2.048444 AGCATAGACAACTGCCCATG 57.952 50.000 0.00 0.00 39.22 3.66
5026 5443 6.477033 CCAGTTTTGTAGTAGCAGTAGCATAG 59.523 42.308 0.00 0.00 45.49 2.23
5056 5491 2.355481 ACCCTCGTTCACGCGTTC 60.355 61.111 10.22 1.91 39.60 3.95
5073 5508 1.198713 GCCATTCTCCACTCTCCTGA 58.801 55.000 0.00 0.00 0.00 3.86
5161 5596 3.134792 GGAGGCGAGACGAGAGCA 61.135 66.667 0.00 0.00 0.00 4.26
5171 5606 4.361971 AGGTGGACGAGGAGGCGA 62.362 66.667 0.00 0.00 34.83 5.54
5227 5662 4.060038 CGGCCCACGTTCCGTAGT 62.060 66.667 11.29 0.00 38.32 2.73
5310 5745 0.813210 ATACCGACGAGGACGAGGTC 60.813 60.000 14.34 0.00 45.70 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.