Multiple sequence alignment - TraesCS7D01G508000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G508000 chr7D 100.000 3631 0 0 1 3631 611755568 611759198 0.000000e+00 6706.0
1 TraesCS7D01G508000 chr7D 85.247 1620 191 30 1036 2641 446997814 446996229 0.000000e+00 1624.0
2 TraesCS7D01G508000 chr7D 83.380 355 38 11 3291 3631 595614687 595615034 3.520000e-80 309.0
3 TraesCS7D01G508000 chr7A 91.295 2734 150 44 419 3112 701692761 701695446 0.000000e+00 3650.0
4 TraesCS7D01G508000 chr7A 84.760 1647 203 27 1013 2640 498230796 498229179 0.000000e+00 1607.0
5 TraesCS7D01G508000 chr7A 87.216 485 33 10 3165 3631 701695458 701695931 3.210000e-145 525.0
6 TraesCS7D01G508000 chr7A 79.083 349 51 12 3292 3626 560591264 560591604 1.700000e-53 220.0
7 TraesCS7D01G508000 chr7A 85.135 74 9 2 3160 3233 5161530 5161459 1.400000e-09 75.0
8 TraesCS7D01G508000 chr7B 89.851 1547 80 28 428 1946 701285873 701287370 0.000000e+00 1916.0
9 TraesCS7D01G508000 chr7B 84.886 1621 206 27 1036 2645 464344923 464343331 0.000000e+00 1600.0
10 TraesCS7D01G508000 chr7B 96.258 962 28 1 1944 2897 701287583 701288544 0.000000e+00 1570.0
11 TraesCS7D01G508000 chr7B 82.967 182 23 5 2978 3155 677124202 677124025 1.350000e-34 158.0
12 TraesCS7D01G508000 chr7B 97.143 35 1 0 3172 3206 628429491 628429525 3.920000e-05 60.2
13 TraesCS7D01G508000 chr1B 87.032 347 24 7 3297 3631 466085895 466086232 4.430000e-99 372.0
14 TraesCS7D01G508000 chr1B 84.571 175 24 2 2983 3155 554042379 554042206 1.730000e-38 171.0
15 TraesCS7D01G508000 chr1B 87.179 117 11 4 3412 3525 466086091 466086206 2.940000e-26 130.0
16 TraesCS7D01G508000 chr2B 78.363 513 96 13 2029 2529 27736538 27736029 5.850000e-83 318.0
17 TraesCS7D01G508000 chr2B 74.633 682 135 32 1127 1789 27737495 27736833 2.150000e-67 267.0
18 TraesCS7D01G508000 chr2A 75.660 682 128 33 1127 1789 17681426 17680764 4.550000e-79 305.0
19 TraesCS7D01G508000 chr2A 74.760 626 120 22 2022 2614 17680472 17679852 2.800000e-61 246.0
20 TraesCS7D01G508000 chr5D 82.405 341 40 10 3298 3631 428685106 428685433 2.760000e-71 279.0
21 TraesCS7D01G508000 chr2D 74.633 682 135 29 1127 1789 15631350 15630688 2.150000e-67 267.0
22 TraesCS7D01G508000 chr2D 85.217 230 31 2 3298 3526 43287861 43287634 2.180000e-57 233.0
23 TraesCS7D01G508000 chr2D 78.116 361 47 16 3298 3631 243660893 243660538 2.210000e-47 200.0
24 TraesCS7D01G508000 chr2D 84.444 180 21 6 2983 3157 11080853 11081030 1.730000e-38 171.0
25 TraesCS7D01G508000 chr2D 80.791 177 29 4 2987 3160 36665958 36666132 2.270000e-27 134.0
26 TraesCS7D01G508000 chr4A 83.122 237 32 5 3331 3565 727755365 727755595 3.670000e-50 209.0
27 TraesCS7D01G508000 chr4A 87.898 157 17 1 3005 3159 170116282 170116126 2.230000e-42 183.0
28 TraesCS7D01G508000 chr4A 86.000 150 14 2 3367 3516 631976528 631976670 1.750000e-33 154.0
29 TraesCS7D01G508000 chr4A 87.640 89 8 3 2294 2379 713894036 713893948 2.310000e-17 100.0
30 TraesCS7D01G508000 chr4A 86.316 95 10 3 2288 2379 713934675 713934769 2.310000e-17 100.0
31 TraesCS7D01G508000 chr1A 78.324 346 48 11 3300 3631 575203588 575203256 7.950000e-47 198.0
32 TraesCS7D01G508000 chr1D 84.571 175 24 2 2983 3155 159608607 159608780 1.730000e-38 171.0
33 TraesCS7D01G508000 chr4B 87.500 152 12 5 3010 3159 383646866 383647012 6.240000e-38 169.0
34 TraesCS7D01G508000 chr6B 85.000 160 18 5 3000 3155 644951217 644951060 1.350000e-34 158.0
35 TraesCS7D01G508000 chr3B 76.068 351 49 18 3295 3631 423075805 423075476 2.260000e-32 150.0
36 TraesCS7D01G508000 chr3A 97.143 35 1 0 3172 3206 26852598 26852564 3.920000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G508000 chr7D 611755568 611759198 3630 False 6706.0 6706 100.0000 1 3631 1 chr7D.!!$F2 3630
1 TraesCS7D01G508000 chr7D 446996229 446997814 1585 True 1624.0 1624 85.2470 1036 2641 1 chr7D.!!$R1 1605
2 TraesCS7D01G508000 chr7A 701692761 701695931 3170 False 2087.5 3650 89.2555 419 3631 2 chr7A.!!$F2 3212
3 TraesCS7D01G508000 chr7A 498229179 498230796 1617 True 1607.0 1607 84.7600 1013 2640 1 chr7A.!!$R2 1627
4 TraesCS7D01G508000 chr7B 701285873 701288544 2671 False 1743.0 1916 93.0545 428 2897 2 chr7B.!!$F2 2469
5 TraesCS7D01G508000 chr7B 464343331 464344923 1592 True 1600.0 1600 84.8860 1036 2645 1 chr7B.!!$R1 1609
6 TraesCS7D01G508000 chr2B 27736029 27737495 1466 True 292.5 318 76.4980 1127 2529 2 chr2B.!!$R1 1402
7 TraesCS7D01G508000 chr2A 17679852 17681426 1574 True 275.5 305 75.2100 1127 2614 2 chr2A.!!$R1 1487
8 TraesCS7D01G508000 chr2D 15630688 15631350 662 True 267.0 267 74.6330 1127 1789 1 chr2D.!!$R1 662

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
346 347 0.034756 CAGACAACCGGACACATCCA 59.965 55.0 9.46 0.0 46.67 3.41 F
350 351 0.034756 CAACCGGACACATCCACAGA 59.965 55.0 9.46 0.0 46.67 3.41 F
942 967 0.179163 GCAGGCGCTACATTTGGAAC 60.179 55.0 7.64 0.0 34.30 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1924 2040 2.828520 ACATAGACTGACAGAGTGTGGG 59.171 50.0 10.08 0.00 33.83 4.61 R
1934 2050 5.180304 TCGATCTAGATGCACATAGACTGAC 59.820 44.0 10.74 4.51 31.09 3.51 R
2717 3093 0.887836 ACAGCATGCACACACTGGAG 60.888 55.0 21.98 0.00 42.53 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.434685 GGCGATGCCTCTCTGAAG 57.565 61.111 0.00 0.00 46.69 3.02
24 25 1.819229 GGCGATGCCTCTCTGAAGA 59.181 57.895 0.00 0.00 46.69 2.87
25 26 0.392336 GGCGATGCCTCTCTGAAGAT 59.608 55.000 0.00 0.00 46.69 2.40
26 27 1.500108 GCGATGCCTCTCTGAAGATG 58.500 55.000 0.00 0.00 0.00 2.90
27 28 1.068281 GCGATGCCTCTCTGAAGATGA 59.932 52.381 0.00 0.00 0.00 2.92
28 29 2.482664 GCGATGCCTCTCTGAAGATGAA 60.483 50.000 0.00 0.00 0.00 2.57
29 30 3.790091 CGATGCCTCTCTGAAGATGAAA 58.210 45.455 0.00 0.00 0.00 2.69
30 31 4.378774 CGATGCCTCTCTGAAGATGAAAT 58.621 43.478 0.00 0.00 0.00 2.17
31 32 5.536260 CGATGCCTCTCTGAAGATGAAATA 58.464 41.667 0.00 0.00 0.00 1.40
32 33 5.987953 CGATGCCTCTCTGAAGATGAAATAA 59.012 40.000 0.00 0.00 0.00 1.40
33 34 6.145858 CGATGCCTCTCTGAAGATGAAATAAG 59.854 42.308 0.00 0.00 0.00 1.73
34 35 5.678583 TGCCTCTCTGAAGATGAAATAAGG 58.321 41.667 0.00 0.00 0.00 2.69
35 36 5.190528 TGCCTCTCTGAAGATGAAATAAGGT 59.809 40.000 0.00 0.00 0.00 3.50
36 37 5.757808 GCCTCTCTGAAGATGAAATAAGGTC 59.242 44.000 0.00 0.00 0.00 3.85
37 38 6.407979 GCCTCTCTGAAGATGAAATAAGGTCT 60.408 42.308 0.00 0.00 0.00 3.85
38 39 7.563906 CCTCTCTGAAGATGAAATAAGGTCTT 58.436 38.462 0.00 0.00 33.87 3.01
39 40 8.046107 CCTCTCTGAAGATGAAATAAGGTCTTT 58.954 37.037 0.00 0.00 31.51 2.52
40 41 9.097257 CTCTCTGAAGATGAAATAAGGTCTTTC 57.903 37.037 0.00 0.00 31.51 2.62
41 42 8.820831 TCTCTGAAGATGAAATAAGGTCTTTCT 58.179 33.333 0.00 0.00 34.43 2.52
56 57 7.006865 AGGTCTTTCTAACTAGTTTTCTCCC 57.993 40.000 14.49 5.97 0.00 4.30
57 58 5.868258 GGTCTTTCTAACTAGTTTTCTCCCG 59.132 44.000 14.49 0.00 0.00 5.14
58 59 6.453943 GTCTTTCTAACTAGTTTTCTCCCGT 58.546 40.000 14.49 0.00 0.00 5.28
59 60 6.927936 GTCTTTCTAACTAGTTTTCTCCCGTT 59.072 38.462 14.49 0.00 0.00 4.44
60 61 6.927381 TCTTTCTAACTAGTTTTCTCCCGTTG 59.073 38.462 14.49 0.00 0.00 4.10
61 62 5.143376 TCTAACTAGTTTTCTCCCGTTGG 57.857 43.478 14.49 0.00 0.00 3.77
62 63 3.851458 AACTAGTTTTCTCCCGTTGGT 57.149 42.857 1.12 0.00 0.00 3.67
63 64 3.397849 ACTAGTTTTCTCCCGTTGGTC 57.602 47.619 0.00 0.00 0.00 4.02
64 65 2.038164 ACTAGTTTTCTCCCGTTGGTCC 59.962 50.000 0.00 0.00 0.00 4.46
65 66 0.841289 AGTTTTCTCCCGTTGGTCCA 59.159 50.000 0.00 0.00 0.00 4.02
66 67 1.423921 AGTTTTCTCCCGTTGGTCCAT 59.576 47.619 0.00 0.00 0.00 3.41
67 68 1.810755 GTTTTCTCCCGTTGGTCCATC 59.189 52.381 0.00 0.00 0.00 3.51
68 69 1.358152 TTTCTCCCGTTGGTCCATCT 58.642 50.000 0.00 0.00 0.00 2.90
69 70 2.241281 TTCTCCCGTTGGTCCATCTA 57.759 50.000 0.00 0.00 0.00 1.98
70 71 1.776662 TCTCCCGTTGGTCCATCTAG 58.223 55.000 0.00 0.00 0.00 2.43
71 72 1.006758 TCTCCCGTTGGTCCATCTAGT 59.993 52.381 0.00 0.00 0.00 2.57
72 73 2.242965 TCTCCCGTTGGTCCATCTAGTA 59.757 50.000 0.00 0.00 0.00 1.82
73 74 3.117246 TCTCCCGTTGGTCCATCTAGTAT 60.117 47.826 0.00 0.00 0.00 2.12
74 75 3.228453 TCCCGTTGGTCCATCTAGTATC 58.772 50.000 0.00 0.00 0.00 2.24
75 76 2.030185 CCCGTTGGTCCATCTAGTATCG 60.030 54.545 0.00 0.00 0.00 2.92
76 77 2.621998 CCGTTGGTCCATCTAGTATCGT 59.378 50.000 0.00 0.00 0.00 3.73
77 78 3.550233 CCGTTGGTCCATCTAGTATCGTG 60.550 52.174 0.00 0.00 0.00 4.35
78 79 3.550233 CGTTGGTCCATCTAGTATCGTGG 60.550 52.174 0.00 0.00 0.00 4.94
79 80 2.594131 TGGTCCATCTAGTATCGTGGG 58.406 52.381 0.00 0.00 32.58 4.61
80 81 2.176148 TGGTCCATCTAGTATCGTGGGA 59.824 50.000 0.00 0.00 32.58 4.37
81 82 3.228453 GGTCCATCTAGTATCGTGGGAA 58.772 50.000 0.00 0.00 32.58 3.97
82 83 3.256136 GGTCCATCTAGTATCGTGGGAAG 59.744 52.174 0.00 0.00 32.58 3.46
83 84 3.256136 GTCCATCTAGTATCGTGGGAAGG 59.744 52.174 0.00 0.00 32.58 3.46
84 85 2.028930 CCATCTAGTATCGTGGGAAGGC 60.029 54.545 0.00 0.00 0.00 4.35
85 86 1.315690 TCTAGTATCGTGGGAAGGCG 58.684 55.000 0.00 0.00 0.00 5.52
86 87 0.318784 CTAGTATCGTGGGAAGGCGC 60.319 60.000 0.00 0.00 0.00 6.53
87 88 2.067091 TAGTATCGTGGGAAGGCGCG 62.067 60.000 0.00 0.00 0.00 6.86
88 89 3.454573 TATCGTGGGAAGGCGCGT 61.455 61.111 8.43 0.00 0.00 6.01
89 90 2.120282 TATCGTGGGAAGGCGCGTA 61.120 57.895 8.43 0.00 0.00 4.42
90 91 1.665264 TATCGTGGGAAGGCGCGTAA 61.665 55.000 8.43 0.00 0.00 3.18
91 92 2.901051 ATCGTGGGAAGGCGCGTAAG 62.901 60.000 8.43 0.00 43.44 2.34
92 93 2.818274 GTGGGAAGGCGCGTAAGG 60.818 66.667 8.43 0.00 38.28 2.69
93 94 3.315949 TGGGAAGGCGCGTAAGGT 61.316 61.111 8.43 0.00 38.28 3.50
94 95 2.818274 GGGAAGGCGCGTAAGGTG 60.818 66.667 8.43 0.00 38.28 4.00
95 96 2.047560 GGAAGGCGCGTAAGGTGT 60.048 61.111 8.43 0.00 38.28 4.16
96 97 2.388232 GGAAGGCGCGTAAGGTGTG 61.388 63.158 8.43 0.00 38.28 3.82
97 98 1.666872 GAAGGCGCGTAAGGTGTGT 60.667 57.895 8.43 0.00 38.28 3.72
98 99 1.623973 GAAGGCGCGTAAGGTGTGTC 61.624 60.000 8.43 0.00 38.28 3.67
99 100 2.048503 GGCGCGTAAGGTGTGTCT 60.049 61.111 8.43 0.00 38.28 3.41
100 101 1.666872 GGCGCGTAAGGTGTGTCTT 60.667 57.895 8.43 0.00 38.28 3.01
101 102 1.226030 GGCGCGTAAGGTGTGTCTTT 61.226 55.000 8.43 0.00 38.28 2.52
102 103 0.110823 GCGCGTAAGGTGTGTCTTTG 60.111 55.000 8.43 0.00 38.28 2.77
103 104 1.493772 CGCGTAAGGTGTGTCTTTGA 58.506 50.000 0.00 0.00 38.28 2.69
104 105 2.066262 CGCGTAAGGTGTGTCTTTGAT 58.934 47.619 0.00 0.00 38.28 2.57
105 106 2.159841 CGCGTAAGGTGTGTCTTTGATG 60.160 50.000 0.00 0.00 38.28 3.07
106 107 2.806244 GCGTAAGGTGTGTCTTTGATGT 59.194 45.455 0.00 0.00 38.28 3.06
107 108 3.991773 GCGTAAGGTGTGTCTTTGATGTA 59.008 43.478 0.00 0.00 38.28 2.29
108 109 4.630069 GCGTAAGGTGTGTCTTTGATGTAT 59.370 41.667 0.00 0.00 38.28 2.29
109 110 5.808540 GCGTAAGGTGTGTCTTTGATGTATA 59.191 40.000 0.00 0.00 38.28 1.47
110 111 6.479001 GCGTAAGGTGTGTCTTTGATGTATAT 59.521 38.462 0.00 0.00 38.28 0.86
111 112 7.306632 GCGTAAGGTGTGTCTTTGATGTATATC 60.307 40.741 0.00 0.00 38.28 1.63
112 113 7.096599 CGTAAGGTGTGTCTTTGATGTATATCG 60.097 40.741 0.00 0.00 36.04 2.92
113 114 5.050490 AGGTGTGTCTTTGATGTATATCGC 58.950 41.667 0.00 0.00 36.04 4.58
114 115 4.808895 GGTGTGTCTTTGATGTATATCGCA 59.191 41.667 0.00 0.00 36.04 5.10
115 116 5.050769 GGTGTGTCTTTGATGTATATCGCAG 60.051 44.000 0.00 0.00 36.04 5.18
116 117 5.049828 TGTGTCTTTGATGTATATCGCAGG 58.950 41.667 0.00 0.00 36.04 4.85
117 118 4.449068 GTGTCTTTGATGTATATCGCAGGG 59.551 45.833 0.00 0.00 36.04 4.45
118 119 4.100963 TGTCTTTGATGTATATCGCAGGGT 59.899 41.667 0.00 0.00 36.04 4.34
119 120 5.057149 GTCTTTGATGTATATCGCAGGGTT 58.943 41.667 0.00 0.00 36.04 4.11
120 121 5.177696 GTCTTTGATGTATATCGCAGGGTTC 59.822 44.000 0.00 0.00 36.04 3.62
121 122 3.297830 TGATGTATATCGCAGGGTTCG 57.702 47.619 0.00 0.00 36.04 3.95
122 123 2.888414 TGATGTATATCGCAGGGTTCGA 59.112 45.455 0.00 0.00 40.45 3.71
123 124 3.509967 TGATGTATATCGCAGGGTTCGAT 59.490 43.478 3.40 3.40 46.79 3.59
124 125 4.021456 TGATGTATATCGCAGGGTTCGATT 60.021 41.667 3.20 0.00 43.27 3.34
125 126 3.649073 TGTATATCGCAGGGTTCGATTG 58.351 45.455 3.20 0.00 43.27 2.67
126 127 2.169832 ATATCGCAGGGTTCGATTGG 57.830 50.000 3.20 0.00 43.27 3.16
127 128 0.828022 TATCGCAGGGTTCGATTGGT 59.172 50.000 3.20 0.00 43.27 3.67
128 129 0.744414 ATCGCAGGGTTCGATTGGTG 60.744 55.000 0.00 0.00 43.27 4.17
129 130 1.671054 CGCAGGGTTCGATTGGTGT 60.671 57.895 0.00 0.00 0.00 4.16
130 131 1.635663 CGCAGGGTTCGATTGGTGTC 61.636 60.000 0.00 0.00 0.00 3.67
131 132 0.321653 GCAGGGTTCGATTGGTGTCT 60.322 55.000 0.00 0.00 0.00 3.41
132 133 1.726853 CAGGGTTCGATTGGTGTCTC 58.273 55.000 0.00 0.00 0.00 3.36
133 134 1.001974 CAGGGTTCGATTGGTGTCTCA 59.998 52.381 0.00 0.00 0.00 3.27
134 135 1.697432 AGGGTTCGATTGGTGTCTCAA 59.303 47.619 0.00 0.00 0.00 3.02
135 136 2.305927 AGGGTTCGATTGGTGTCTCAAT 59.694 45.455 0.00 0.00 39.76 2.57
136 137 3.081804 GGGTTCGATTGGTGTCTCAATT 58.918 45.455 0.00 0.00 37.47 2.32
137 138 3.127030 GGGTTCGATTGGTGTCTCAATTC 59.873 47.826 0.00 0.00 37.47 2.17
138 139 3.127030 GGTTCGATTGGTGTCTCAATTCC 59.873 47.826 0.00 0.00 37.47 3.01
139 140 3.694043 TCGATTGGTGTCTCAATTCCA 57.306 42.857 0.00 0.00 37.47 3.53
140 141 3.599343 TCGATTGGTGTCTCAATTCCAG 58.401 45.455 0.00 0.00 37.47 3.86
141 142 2.096496 CGATTGGTGTCTCAATTCCAGC 59.904 50.000 0.00 0.00 37.47 4.85
142 143 2.655090 TTGGTGTCTCAATTCCAGCA 57.345 45.000 0.00 0.00 35.05 4.41
143 144 1.896220 TGGTGTCTCAATTCCAGCAC 58.104 50.000 0.00 0.00 32.20 4.40
144 145 1.168714 GGTGTCTCAATTCCAGCACC 58.831 55.000 0.00 0.00 39.38 5.01
145 146 1.168714 GTGTCTCAATTCCAGCACCC 58.831 55.000 0.00 0.00 0.00 4.61
146 147 0.321564 TGTCTCAATTCCAGCACCCG 60.322 55.000 0.00 0.00 0.00 5.28
147 148 1.377202 TCTCAATTCCAGCACCCGC 60.377 57.895 0.00 0.00 38.99 6.13
157 158 2.102161 GCACCCGCTTTAATGCCG 59.898 61.111 7.68 1.75 34.30 5.69
158 159 2.798009 CACCCGCTTTAATGCCGG 59.202 61.111 15.89 15.89 37.36 6.13
159 160 3.138128 ACCCGCTTTAATGCCGGC 61.138 61.111 22.73 22.73 35.29 6.13
160 161 2.828549 CCCGCTTTAATGCCGGCT 60.829 61.111 29.70 11.31 0.00 5.52
161 162 2.715624 CCGCTTTAATGCCGGCTC 59.284 61.111 29.70 0.00 0.00 4.70
162 163 2.715624 CGCTTTAATGCCGGCTCC 59.284 61.111 29.70 6.71 0.00 4.70
163 164 2.112198 CGCTTTAATGCCGGCTCCA 61.112 57.895 29.70 7.94 0.00 3.86
164 165 1.729881 GCTTTAATGCCGGCTCCAG 59.270 57.895 29.70 16.58 0.00 3.86
165 166 1.032114 GCTTTAATGCCGGCTCCAGT 61.032 55.000 29.70 9.51 0.00 4.00
166 167 1.745827 GCTTTAATGCCGGCTCCAGTA 60.746 52.381 29.70 8.32 0.00 2.74
167 168 2.639065 CTTTAATGCCGGCTCCAGTAA 58.361 47.619 29.70 14.50 0.00 2.24
168 169 2.325583 TTAATGCCGGCTCCAGTAAG 57.674 50.000 29.70 0.00 0.00 2.34
169 170 1.491668 TAATGCCGGCTCCAGTAAGA 58.508 50.000 29.70 3.35 0.00 2.10
170 171 0.179000 AATGCCGGCTCCAGTAAGAG 59.821 55.000 29.70 0.00 36.92 2.85
171 172 1.690219 ATGCCGGCTCCAGTAAGAGG 61.690 60.000 29.70 0.00 34.26 3.69
175 176 2.202946 GCTCCAGTAAGAGGCCGC 60.203 66.667 0.00 0.00 34.26 6.53
176 177 2.105128 CTCCAGTAAGAGGCCGCG 59.895 66.667 0.00 0.00 0.00 6.46
177 178 2.678934 TCCAGTAAGAGGCCGCGT 60.679 61.111 4.92 0.00 0.00 6.01
178 179 2.227089 CTCCAGTAAGAGGCCGCGTT 62.227 60.000 4.92 0.00 0.00 4.84
179 180 1.375523 CCAGTAAGAGGCCGCGTTT 60.376 57.895 4.92 0.00 0.00 3.60
180 181 0.953960 CCAGTAAGAGGCCGCGTTTT 60.954 55.000 4.92 0.00 0.00 2.43
181 182 0.442699 CAGTAAGAGGCCGCGTTTTC 59.557 55.000 4.92 0.00 0.00 2.29
182 183 0.320697 AGTAAGAGGCCGCGTTTTCT 59.679 50.000 4.92 1.08 0.00 2.52
183 184 0.720027 GTAAGAGGCCGCGTTTTCTC 59.280 55.000 4.92 6.26 0.00 2.87
184 185 0.606604 TAAGAGGCCGCGTTTTCTCT 59.393 50.000 4.92 8.55 38.12 3.10
185 186 0.606604 AAGAGGCCGCGTTTTCTCTA 59.393 50.000 4.92 0.00 35.76 2.43
186 187 0.606604 AGAGGCCGCGTTTTCTCTAA 59.393 50.000 4.92 0.00 35.13 2.10
187 188 1.000145 GAGGCCGCGTTTTCTCTAAG 59.000 55.000 4.92 0.00 0.00 2.18
188 189 0.320697 AGGCCGCGTTTTCTCTAAGT 59.679 50.000 4.92 0.00 0.00 2.24
189 190 0.720027 GGCCGCGTTTTCTCTAAGTC 59.280 55.000 4.92 0.00 0.00 3.01
190 191 0.365859 GCCGCGTTTTCTCTAAGTCG 59.634 55.000 4.92 0.00 0.00 4.18
191 192 0.989890 CCGCGTTTTCTCTAAGTCGG 59.010 55.000 4.92 0.00 0.00 4.79
192 193 0.365859 CGCGTTTTCTCTAAGTCGGC 59.634 55.000 0.00 0.00 0.00 5.54
193 194 1.425412 GCGTTTTCTCTAAGTCGGCA 58.575 50.000 0.00 0.00 0.00 5.69
194 195 2.000447 GCGTTTTCTCTAAGTCGGCAT 59.000 47.619 0.00 0.00 0.00 4.40
195 196 2.222819 GCGTTTTCTCTAAGTCGGCATG 60.223 50.000 0.00 0.00 0.00 4.06
196 197 3.250744 CGTTTTCTCTAAGTCGGCATGA 58.749 45.455 0.00 0.00 0.00 3.07
197 198 3.304559 CGTTTTCTCTAAGTCGGCATGAG 59.695 47.826 0.00 0.00 0.00 2.90
198 199 4.246458 GTTTTCTCTAAGTCGGCATGAGT 58.754 43.478 0.00 0.00 0.00 3.41
199 200 3.510388 TTCTCTAAGTCGGCATGAGTG 57.490 47.619 0.00 0.00 0.00 3.51
234 235 4.760047 GTGCGGTGCGTGGGAGAT 62.760 66.667 0.00 0.00 0.00 2.75
235 236 4.758251 TGCGGTGCGTGGGAGATG 62.758 66.667 0.00 0.00 0.00 2.90
236 237 4.760047 GCGGTGCGTGGGAGATGT 62.760 66.667 0.00 0.00 0.00 3.06
237 238 2.047274 CGGTGCGTGGGAGATGTT 60.047 61.111 0.00 0.00 0.00 2.71
238 239 1.671054 CGGTGCGTGGGAGATGTTT 60.671 57.895 0.00 0.00 0.00 2.83
239 240 1.234615 CGGTGCGTGGGAGATGTTTT 61.235 55.000 0.00 0.00 0.00 2.43
240 241 0.958822 GGTGCGTGGGAGATGTTTTT 59.041 50.000 0.00 0.00 0.00 1.94
258 259 2.040359 TGGTGGACCAGGGTGTCA 60.040 61.111 0.00 0.00 42.01 3.58
259 260 2.146724 TGGTGGACCAGGGTGTCAG 61.147 63.158 0.00 0.00 42.01 3.51
260 261 1.841556 GGTGGACCAGGGTGTCAGA 60.842 63.158 0.00 0.00 36.97 3.27
261 262 1.371558 GTGGACCAGGGTGTCAGAC 59.628 63.158 0.00 0.00 36.97 3.51
262 263 2.207229 TGGACCAGGGTGTCAGACG 61.207 63.158 0.00 0.00 36.97 4.18
263 264 2.207924 GGACCAGGGTGTCAGACGT 61.208 63.158 0.00 0.00 36.97 4.34
264 265 1.006102 GACCAGGGTGTCAGACGTG 60.006 63.158 0.00 0.00 35.29 4.49
265 266 1.745320 GACCAGGGTGTCAGACGTGT 61.745 60.000 0.00 0.00 35.29 4.49
266 267 0.468585 ACCAGGGTGTCAGACGTGTA 60.469 55.000 0.00 0.00 0.00 2.90
267 268 0.038526 CCAGGGTGTCAGACGTGTAC 60.039 60.000 0.00 0.00 0.00 2.90
268 269 0.671796 CAGGGTGTCAGACGTGTACA 59.328 55.000 0.00 0.00 0.00 2.90
269 270 1.272490 CAGGGTGTCAGACGTGTACAT 59.728 52.381 0.00 0.00 0.00 2.29
270 271 1.272490 AGGGTGTCAGACGTGTACATG 59.728 52.381 13.64 13.64 0.00 3.21
271 272 1.671850 GGGTGTCAGACGTGTACATGG 60.672 57.143 19.05 7.61 0.00 3.66
272 273 1.068474 GTGTCAGACGTGTACATGGC 58.932 55.000 19.05 16.47 0.00 4.40
273 274 0.966179 TGTCAGACGTGTACATGGCT 59.034 50.000 18.18 18.18 35.69 4.75
274 275 2.094906 GTGTCAGACGTGTACATGGCTA 60.095 50.000 23.10 5.41 32.92 3.93
275 276 2.094906 TGTCAGACGTGTACATGGCTAC 60.095 50.000 23.10 19.40 32.92 3.58
276 277 1.131693 TCAGACGTGTACATGGCTACG 59.868 52.381 23.10 12.17 41.86 3.51
277 278 0.454600 AGACGTGTACATGGCTACGG 59.545 55.000 22.31 0.00 40.56 4.02
278 279 0.171903 GACGTGTACATGGCTACGGT 59.828 55.000 19.05 6.36 40.56 4.83
279 280 0.171903 ACGTGTACATGGCTACGGTC 59.828 55.000 19.05 0.00 40.56 4.79
280 281 0.526954 CGTGTACATGGCTACGGTCC 60.527 60.000 7.22 0.00 33.27 4.46
281 282 0.526954 GTGTACATGGCTACGGTCCG 60.527 60.000 10.48 10.48 0.00 4.79
282 283 1.066918 GTACATGGCTACGGTCCGG 59.933 63.158 17.28 0.00 0.00 5.14
283 284 2.129146 TACATGGCTACGGTCCGGG 61.129 63.158 17.28 9.14 0.00 5.73
284 285 4.910585 CATGGCTACGGTCCGGGC 62.911 72.222 17.28 18.28 0.00 6.13
301 302 3.434319 CGCCCACAAAGCTCGCAT 61.434 61.111 0.00 0.00 0.00 4.73
302 303 2.180017 GCCCACAAAGCTCGCATG 59.820 61.111 0.00 0.00 0.00 4.06
303 304 2.334946 GCCCACAAAGCTCGCATGA 61.335 57.895 0.00 0.00 0.00 3.07
304 305 1.660560 GCCCACAAAGCTCGCATGAT 61.661 55.000 0.00 0.00 0.00 2.45
305 306 0.813184 CCCACAAAGCTCGCATGATT 59.187 50.000 0.00 0.00 0.00 2.57
306 307 1.203052 CCCACAAAGCTCGCATGATTT 59.797 47.619 0.00 0.00 0.00 2.17
307 308 2.256174 CCACAAAGCTCGCATGATTTG 58.744 47.619 12.94 12.94 45.41 2.32
310 311 2.937591 CAAAGCTCGCATGATTTGTGT 58.062 42.857 0.00 0.00 38.18 3.72
311 312 2.907910 AAGCTCGCATGATTTGTGTC 57.092 45.000 0.00 0.00 37.14 3.67
312 313 1.089920 AGCTCGCATGATTTGTGTCC 58.910 50.000 0.00 0.00 37.14 4.02
313 314 0.247814 GCTCGCATGATTTGTGTCCG 60.248 55.000 0.00 0.00 37.14 4.79
314 315 0.374758 CTCGCATGATTTGTGTCCGG 59.625 55.000 0.00 0.00 37.14 5.14
315 316 0.321210 TCGCATGATTTGTGTCCGGT 60.321 50.000 0.00 0.00 37.14 5.28
316 317 0.521291 CGCATGATTTGTGTCCGGTT 59.479 50.000 0.00 0.00 0.00 4.44
317 318 1.068610 CGCATGATTTGTGTCCGGTTT 60.069 47.619 0.00 0.00 0.00 3.27
318 319 2.160615 CGCATGATTTGTGTCCGGTTTA 59.839 45.455 0.00 0.00 0.00 2.01
319 320 3.181501 CGCATGATTTGTGTCCGGTTTAT 60.182 43.478 0.00 0.00 0.00 1.40
320 321 4.104776 GCATGATTTGTGTCCGGTTTATG 58.895 43.478 0.00 0.00 0.00 1.90
321 322 4.671377 CATGATTTGTGTCCGGTTTATGG 58.329 43.478 0.00 0.00 0.00 2.74
322 323 3.085533 TGATTTGTGTCCGGTTTATGGG 58.914 45.455 0.00 0.00 0.00 4.00
323 324 2.953284 TTTGTGTCCGGTTTATGGGA 57.047 45.000 0.00 0.00 0.00 4.37
324 325 3.443145 TTTGTGTCCGGTTTATGGGAT 57.557 42.857 0.00 0.00 34.25 3.85
325 326 3.443145 TTGTGTCCGGTTTATGGGATT 57.557 42.857 0.00 0.00 34.25 3.01
326 327 3.443145 TGTGTCCGGTTTATGGGATTT 57.557 42.857 0.00 0.00 34.25 2.17
327 328 3.349022 TGTGTCCGGTTTATGGGATTTC 58.651 45.455 0.00 0.00 34.25 2.17
328 329 3.244946 TGTGTCCGGTTTATGGGATTTCA 60.245 43.478 0.00 0.00 34.25 2.69
329 330 3.377172 GTGTCCGGTTTATGGGATTTCAG 59.623 47.826 0.00 0.00 34.25 3.02
330 331 3.264706 TGTCCGGTTTATGGGATTTCAGA 59.735 43.478 0.00 0.00 34.25 3.27
331 332 3.626217 GTCCGGTTTATGGGATTTCAGAC 59.374 47.826 0.00 0.00 34.25 3.51
332 333 3.264706 TCCGGTTTATGGGATTTCAGACA 59.735 43.478 0.00 0.00 0.00 3.41
333 334 4.013728 CCGGTTTATGGGATTTCAGACAA 58.986 43.478 0.00 0.00 0.00 3.18
334 335 4.142469 CCGGTTTATGGGATTTCAGACAAC 60.142 45.833 0.00 0.00 0.00 3.32
335 336 4.142469 CGGTTTATGGGATTTCAGACAACC 60.142 45.833 0.00 0.00 0.00 3.77
336 337 4.142469 GGTTTATGGGATTTCAGACAACCG 60.142 45.833 0.00 0.00 0.00 4.44
337 338 2.128771 ATGGGATTTCAGACAACCGG 57.871 50.000 0.00 0.00 0.00 5.28
338 339 1.060729 TGGGATTTCAGACAACCGGA 58.939 50.000 9.46 0.00 0.00 5.14
339 340 1.271163 TGGGATTTCAGACAACCGGAC 60.271 52.381 9.46 0.00 0.00 4.79
340 341 1.271163 GGGATTTCAGACAACCGGACA 60.271 52.381 9.46 0.00 0.00 4.02
341 342 1.804748 GGATTTCAGACAACCGGACAC 59.195 52.381 9.46 0.00 0.00 3.67
342 343 2.489971 GATTTCAGACAACCGGACACA 58.510 47.619 9.46 0.00 0.00 3.72
343 344 2.631160 TTTCAGACAACCGGACACAT 57.369 45.000 9.46 0.00 0.00 3.21
344 345 2.163818 TTCAGACAACCGGACACATC 57.836 50.000 9.46 0.00 0.00 3.06
345 346 0.320374 TCAGACAACCGGACACATCC 59.680 55.000 9.46 0.00 42.28 3.51
346 347 0.034756 CAGACAACCGGACACATCCA 59.965 55.000 9.46 0.00 46.67 3.41
347 348 0.034896 AGACAACCGGACACATCCAC 59.965 55.000 9.46 0.00 46.67 4.02
348 349 0.250124 GACAACCGGACACATCCACA 60.250 55.000 9.46 0.00 46.67 4.17
349 350 0.250295 ACAACCGGACACATCCACAG 60.250 55.000 9.46 0.00 46.67 3.66
350 351 0.034756 CAACCGGACACATCCACAGA 59.965 55.000 9.46 0.00 46.67 3.41
351 352 0.984230 AACCGGACACATCCACAGAT 59.016 50.000 9.46 0.00 46.67 2.90
365 366 6.699242 ATCCACAGATGAATAGGATGTCAT 57.301 37.500 0.00 0.00 37.68 3.06
366 367 7.803487 ATCCACAGATGAATAGGATGTCATA 57.197 36.000 0.00 0.00 37.68 2.15
367 368 7.803487 TCCACAGATGAATAGGATGTCATAT 57.197 36.000 0.00 0.00 34.61 1.78
368 369 8.211030 TCCACAGATGAATAGGATGTCATATT 57.789 34.615 0.03 0.03 35.78 1.28
369 370 8.098912 TCCACAGATGAATAGGATGTCATATTG 58.901 37.037 4.82 0.00 33.58 1.90
370 371 7.336176 CCACAGATGAATAGGATGTCATATTGG 59.664 40.741 4.82 0.00 33.58 3.16
371 372 8.098912 CACAGATGAATAGGATGTCATATTGGA 58.901 37.037 4.82 0.00 33.58 3.53
372 373 8.833734 ACAGATGAATAGGATGTCATATTGGAT 58.166 33.333 4.82 0.00 33.58 3.41
373 374 9.110502 CAGATGAATAGGATGTCATATTGGATG 57.889 37.037 4.82 0.00 33.58 3.51
374 375 9.054580 AGATGAATAGGATGTCATATTGGATGA 57.945 33.333 4.82 0.00 33.58 2.92
375 376 9.107177 GATGAATAGGATGTCATATTGGATGAC 57.893 37.037 10.14 10.14 46.28 3.06
384 385 5.581605 GTCATATTGGATGACAAAATGCGT 58.418 37.500 11.81 0.00 45.61 5.24
385 386 6.035843 GTCATATTGGATGACAAAATGCGTT 58.964 36.000 11.81 0.00 45.61 4.84
386 387 6.197096 GTCATATTGGATGACAAAATGCGTTC 59.803 38.462 11.81 0.00 45.61 3.95
387 388 3.998099 TTGGATGACAAAATGCGTTCA 57.002 38.095 0.00 0.00 35.79 3.18
388 389 3.557577 TGGATGACAAAATGCGTTCAG 57.442 42.857 0.00 0.00 0.00 3.02
389 390 2.228582 TGGATGACAAAATGCGTTCAGG 59.771 45.455 0.00 0.00 0.00 3.86
390 391 2.253603 GATGACAAAATGCGTTCAGGC 58.746 47.619 0.00 0.00 0.00 4.85
397 398 3.343972 TGCGTTCAGGCAGCTTTC 58.656 55.556 0.00 0.00 38.17 2.62
398 399 2.260869 TGCGTTCAGGCAGCTTTCC 61.261 57.895 0.00 0.00 38.17 3.13
399 400 2.260869 GCGTTCAGGCAGCTTTCCA 61.261 57.895 4.72 0.00 0.00 3.53
400 401 1.576421 CGTTCAGGCAGCTTTCCAC 59.424 57.895 4.72 0.00 0.00 4.02
401 402 1.165907 CGTTCAGGCAGCTTTCCACA 61.166 55.000 4.72 0.00 0.00 4.17
402 403 0.312102 GTTCAGGCAGCTTTCCACAC 59.688 55.000 4.72 0.00 0.00 3.82
403 404 1.165907 TTCAGGCAGCTTTCCACACG 61.166 55.000 4.72 0.00 0.00 4.49
404 405 1.893808 CAGGCAGCTTTCCACACGT 60.894 57.895 4.72 0.00 0.00 4.49
405 406 1.152963 AGGCAGCTTTCCACACGTT 60.153 52.632 4.72 0.00 0.00 3.99
406 407 0.751643 AGGCAGCTTTCCACACGTTT 60.752 50.000 4.72 0.00 0.00 3.60
407 408 0.594796 GGCAGCTTTCCACACGTTTG 60.595 55.000 0.00 0.00 0.00 2.93
408 409 1.208642 GCAGCTTTCCACACGTTTGC 61.209 55.000 0.00 0.00 0.00 3.68
409 410 0.929824 CAGCTTTCCACACGTTTGCG 60.930 55.000 0.00 0.00 44.93 4.85
410 411 1.657181 GCTTTCCACACGTTTGCGG 60.657 57.895 0.00 0.00 43.45 5.69
411 412 2.018544 CTTTCCACACGTTTGCGGA 58.981 52.632 0.00 0.00 43.45 5.54
412 413 0.378962 CTTTCCACACGTTTGCGGAA 59.621 50.000 0.00 0.00 41.35 4.30
413 414 0.809385 TTTCCACACGTTTGCGGAAA 59.191 45.000 11.48 11.48 46.96 3.13
414 415 0.809385 TTCCACACGTTTGCGGAAAA 59.191 45.000 2.79 0.00 40.35 2.29
415 416 1.025812 TCCACACGTTTGCGGAAAAT 58.974 45.000 2.79 0.00 43.45 1.82
416 417 1.405821 TCCACACGTTTGCGGAAAATT 59.594 42.857 2.79 0.00 43.45 1.82
417 418 2.159226 TCCACACGTTTGCGGAAAATTT 60.159 40.909 2.79 0.00 43.45 1.82
418 419 2.034170 CCACACGTTTGCGGAAAATTTG 60.034 45.455 2.79 4.23 43.45 2.32
419 420 2.854777 CACACGTTTGCGGAAAATTTGA 59.145 40.909 2.79 0.00 43.45 2.69
420 421 3.061271 CACACGTTTGCGGAAAATTTGAG 60.061 43.478 2.79 0.00 43.45 3.02
421 422 2.470999 CACGTTTGCGGAAAATTTGAGG 59.529 45.455 2.79 0.00 43.45 3.86
422 423 2.058057 CGTTTGCGGAAAATTTGAGGG 58.942 47.619 2.79 0.00 0.00 4.30
423 424 2.544903 CGTTTGCGGAAAATTTGAGGGT 60.545 45.455 2.79 0.00 0.00 4.34
424 425 3.057019 GTTTGCGGAAAATTTGAGGGTC 58.943 45.455 2.79 0.00 0.00 4.46
425 426 1.253100 TGCGGAAAATTTGAGGGTCC 58.747 50.000 0.00 0.00 0.00 4.46
426 427 1.203001 TGCGGAAAATTTGAGGGTCCT 60.203 47.619 4.72 0.00 0.00 3.85
512 513 0.884704 CCTGGTCCGGTTGACACTTG 60.885 60.000 0.00 0.00 46.38 3.16
616 624 3.796717 CGAAAAACTCACCTGAAAAAGCC 59.203 43.478 0.00 0.00 0.00 4.35
622 630 2.023673 TCACCTGAAAAAGCCACAGTG 58.976 47.619 0.00 0.00 0.00 3.66
623 631 0.746659 ACCTGAAAAAGCCACAGTGC 59.253 50.000 0.00 0.00 0.00 4.40
625 633 1.342174 CCTGAAAAAGCCACAGTGCAT 59.658 47.619 0.00 0.00 0.00 3.96
627 635 3.054878 CTGAAAAAGCCACAGTGCATTC 58.945 45.455 0.00 0.00 0.00 2.67
630 638 3.825143 AAAAGCCACAGTGCATTCTTT 57.175 38.095 0.00 0.00 0.00 2.52
632 640 3.825143 AAGCCACAGTGCATTCTTTTT 57.175 38.095 0.00 0.00 0.00 1.94
655 663 3.881220 TGGGAATCTAACGGAATCCAAC 58.119 45.455 0.00 0.00 43.92 3.77
659 667 4.881850 GGAATCTAACGGAATCCAACATGT 59.118 41.667 0.00 0.00 42.20 3.21
664 672 1.066430 ACGGAATCCAACATGTAGCGT 60.066 47.619 0.00 0.00 0.00 5.07
665 673 1.593006 CGGAATCCAACATGTAGCGTC 59.407 52.381 0.00 0.00 0.00 5.19
666 674 2.738643 CGGAATCCAACATGTAGCGTCT 60.739 50.000 0.00 0.00 0.00 4.18
671 679 3.472652 TCCAACATGTAGCGTCTTTGTT 58.527 40.909 0.00 0.00 0.00 2.83
677 685 1.070105 TAGCGTCTTTGTTGGCCGT 59.930 52.632 0.00 0.00 0.00 5.68
680 688 1.890041 CGTCTTTGTTGGCCGTGGA 60.890 57.895 0.00 0.00 0.00 4.02
683 691 2.519780 TTTGTTGGCCGTGGACCC 60.520 61.111 0.00 0.00 0.00 4.46
684 692 2.976494 CTTTGTTGGCCGTGGACCCT 62.976 60.000 0.00 0.00 0.00 4.34
685 693 2.969300 TTTGTTGGCCGTGGACCCTC 62.969 60.000 0.00 0.00 0.00 4.30
747 761 4.083484 CGGTAAAGTGAGACAATGGAAACC 60.083 45.833 0.00 0.00 0.00 3.27
756 770 4.901868 AGACAATGGAAACCGCTAAAGTA 58.098 39.130 0.00 0.00 0.00 2.24
757 771 4.935808 AGACAATGGAAACCGCTAAAGTAG 59.064 41.667 0.00 0.00 0.00 2.57
758 772 4.648651 ACAATGGAAACCGCTAAAGTAGT 58.351 39.130 0.00 0.00 0.00 2.73
759 773 4.454504 ACAATGGAAACCGCTAAAGTAGTG 59.545 41.667 0.00 0.00 36.09 2.74
760 774 4.546829 ATGGAAACCGCTAAAGTAGTGA 57.453 40.909 0.00 0.00 38.55 3.41
761 775 3.921677 TGGAAACCGCTAAAGTAGTGAG 58.078 45.455 0.00 0.00 38.55 3.51
762 776 3.575256 TGGAAACCGCTAAAGTAGTGAGA 59.425 43.478 0.00 0.00 38.55 3.27
763 777 4.174762 GGAAACCGCTAAAGTAGTGAGAG 58.825 47.826 0.00 0.00 38.55 3.20
764 778 4.321824 GGAAACCGCTAAAGTAGTGAGAGT 60.322 45.833 0.00 0.00 38.55 3.24
765 779 3.851976 ACCGCTAAAGTAGTGAGAGTG 57.148 47.619 0.00 0.00 38.55 3.51
766 780 3.155501 ACCGCTAAAGTAGTGAGAGTGT 58.844 45.455 0.00 0.00 38.55 3.55
767 781 3.057456 ACCGCTAAAGTAGTGAGAGTGTG 60.057 47.826 0.00 0.00 38.55 3.82
768 782 2.917971 CGCTAAAGTAGTGAGAGTGTGC 59.082 50.000 0.00 0.00 38.55 4.57
769 783 3.611766 CGCTAAAGTAGTGAGAGTGTGCA 60.612 47.826 0.00 0.00 38.55 4.57
770 784 3.923461 GCTAAAGTAGTGAGAGTGTGCAG 59.077 47.826 0.00 0.00 0.00 4.41
923 948 3.744559 CCATAAATGGCCGACGGG 58.255 61.111 17.22 0.00 41.75 5.28
940 965 1.748879 GGCAGGCGCTACATTTGGA 60.749 57.895 7.64 0.00 38.60 3.53
942 967 0.179163 GCAGGCGCTACATTTGGAAC 60.179 55.000 7.64 0.00 34.30 3.62
965 990 2.357034 GCACGACACGGGTCACAT 60.357 61.111 19.62 0.00 44.54 3.21
985 1010 2.513204 CCGCGGACGAGGTAGAGA 60.513 66.667 24.07 0.00 43.93 3.10
986 1011 2.708255 CGCGGACGAGGTAGAGAC 59.292 66.667 0.00 0.00 43.93 3.36
987 1012 2.708255 GCGGACGAGGTAGAGACG 59.292 66.667 0.00 0.00 0.00 4.18
988 1013 2.105466 GCGGACGAGGTAGAGACGT 61.105 63.158 0.00 0.00 42.84 4.34
989 1014 1.714414 CGGACGAGGTAGAGACGTG 59.286 63.158 0.00 0.00 40.29 4.49
990 1015 1.703438 CGGACGAGGTAGAGACGTGG 61.703 65.000 0.00 0.00 40.29 4.94
994 1019 1.511768 GAGGTAGAGACGTGGGTGC 59.488 63.158 0.00 0.00 0.00 5.01
1018 1049 1.269958 CATGGAGTCAGTGGGAGTGA 58.730 55.000 0.00 0.00 0.00 3.41
1789 1848 3.049080 ATCCGGGCCAAGGAGAAGC 62.049 63.158 21.52 0.00 41.66 3.86
1923 2039 3.006247 GTTCGTCCTCGTAAGTACTCCT 58.994 50.000 0.00 0.00 38.33 3.69
1924 2040 2.898705 TCGTCCTCGTAAGTACTCCTC 58.101 52.381 0.00 0.00 38.33 3.71
1934 2050 2.223803 AGTACTCCTCCCACACTCTG 57.776 55.000 0.00 0.00 0.00 3.35
2717 3093 3.794646 CGAGCATTTCATCTCGTGC 57.205 52.632 3.76 0.00 44.95 5.34
2826 3212 5.123186 TGTGTTCTACTTGTTTCTGTTGTGG 59.877 40.000 0.00 0.00 0.00 4.17
2885 3276 4.093408 CACGTTGCAACATTCACTAGCTAT 59.907 41.667 28.01 0.00 0.00 2.97
2929 3320 1.269051 ACAACGCTAAAACCTGCAAGC 60.269 47.619 0.00 0.00 0.00 4.01
2934 3325 1.930371 GCTAAAACCTGCAAGCAACCG 60.930 52.381 0.95 0.00 35.05 4.44
2954 3345 4.964262 ACCGGTAGATCCACATTAAACCTA 59.036 41.667 4.49 0.00 35.57 3.08
2955 3346 5.426185 ACCGGTAGATCCACATTAAACCTAA 59.574 40.000 4.49 0.00 35.57 2.69
2957 3348 6.996282 CCGGTAGATCCACATTAAACCTAAAT 59.004 38.462 0.00 0.00 35.57 1.40
2998 3389 7.503566 CAGACTCCCATGTTGAAATATATTGGT 59.496 37.037 0.00 0.00 0.00 3.67
3013 3404 9.645128 AAATATATTGGTCACATCTTTCCATCA 57.355 29.630 0.00 0.00 0.00 3.07
3015 3406 4.371624 TTGGTCACATCTTTCCATCAGT 57.628 40.909 0.00 0.00 0.00 3.41
3016 3407 4.371624 TGGTCACATCTTTCCATCAGTT 57.628 40.909 0.00 0.00 0.00 3.16
3017 3408 4.326826 TGGTCACATCTTTCCATCAGTTC 58.673 43.478 0.00 0.00 0.00 3.01
3018 3409 4.202451 TGGTCACATCTTTCCATCAGTTCA 60.202 41.667 0.00 0.00 0.00 3.18
3019 3410 4.761739 GGTCACATCTTTCCATCAGTTCAA 59.238 41.667 0.00 0.00 0.00 2.69
3020 3411 5.241506 GGTCACATCTTTCCATCAGTTCAAA 59.758 40.000 0.00 0.00 0.00 2.69
3021 3412 6.145535 GTCACATCTTTCCATCAGTTCAAAC 58.854 40.000 0.00 0.00 0.00 2.93
3022 3413 6.016777 GTCACATCTTTCCATCAGTTCAAACT 60.017 38.462 0.00 0.00 40.60 2.66
3023 3414 6.547141 TCACATCTTTCCATCAGTTCAAACTT 59.453 34.615 0.00 0.00 37.08 2.66
3024 3415 7.068593 TCACATCTTTCCATCAGTTCAAACTTT 59.931 33.333 0.00 0.00 37.08 2.66
3025 3416 7.707893 CACATCTTTCCATCAGTTCAAACTTTT 59.292 33.333 0.00 0.00 37.08 2.27
3026 3417 7.707893 ACATCTTTCCATCAGTTCAAACTTTTG 59.292 33.333 0.00 0.00 37.08 2.44
3027 3418 6.572519 TCTTTCCATCAGTTCAAACTTTTGG 58.427 36.000 11.90 11.90 38.74 3.28
3028 3419 6.379703 TCTTTCCATCAGTTCAAACTTTTGGA 59.620 34.615 14.97 14.97 41.85 3.53
3029 3420 5.772825 TCCATCAGTTCAAACTTTTGGAG 57.227 39.130 14.97 0.00 40.16 3.86
3030 3421 4.037923 TCCATCAGTTCAAACTTTTGGAGC 59.962 41.667 14.97 0.00 40.16 4.70
3031 3422 4.202141 CCATCAGTTCAAACTTTTGGAGCA 60.202 41.667 12.47 0.00 39.29 4.26
3032 3423 5.350633 CATCAGTTCAAACTTTTGGAGCAA 58.649 37.500 1.94 0.00 37.08 3.91
3072 3465 6.392625 TTCACTATTATCCGAGTCAAGAGG 57.607 41.667 0.00 0.00 0.00 3.69
3079 3472 4.993029 ATCCGAGTCAAGAGGTCTTTAG 57.007 45.455 0.00 0.00 33.11 1.85
3085 3478 5.983720 CGAGTCAAGAGGTCTTTAGTTGAAA 59.016 40.000 0.00 0.00 33.11 2.69
3087 3480 7.516943 CGAGTCAAGAGGTCTTTAGTTGAAAAC 60.517 40.741 0.00 0.00 39.91 2.43
3090 3483 5.009710 CAAGAGGTCTTTAGTTGAAAACCCC 59.990 44.000 0.00 0.00 40.28 4.95
3097 3490 1.299544 GTTGAAAACCCCGCCAACG 60.300 57.895 0.00 0.00 42.21 4.10
3112 3505 5.749109 CCCGCCAACGCATTATTAAAATAAA 59.251 36.000 0.00 0.00 38.22 1.40
3113 3506 6.255887 CCCGCCAACGCATTATTAAAATAAAA 59.744 34.615 0.00 0.00 38.22 1.52
3114 3507 7.201530 CCCGCCAACGCATTATTAAAATAAAAA 60.202 33.333 0.00 0.00 38.22 1.94
3115 3508 7.843686 CCGCCAACGCATTATTAAAATAAAAAG 59.156 33.333 0.00 0.00 38.22 2.27
3133 3526 6.884280 AAAAAGATTCTTGGGCCTATATCG 57.116 37.500 4.53 0.00 0.00 2.92
3134 3527 5.825593 AAAGATTCTTGGGCCTATATCGA 57.174 39.130 4.53 0.00 0.00 3.59
3135 3528 6.380079 AAAGATTCTTGGGCCTATATCGAT 57.620 37.500 4.53 2.16 0.00 3.59
3136 3529 5.606348 AGATTCTTGGGCCTATATCGATC 57.394 43.478 0.00 0.00 0.00 3.69
3137 3530 5.276440 AGATTCTTGGGCCTATATCGATCT 58.724 41.667 0.00 0.00 0.00 2.75
3138 3531 5.362430 AGATTCTTGGGCCTATATCGATCTC 59.638 44.000 0.00 0.00 0.00 2.75
3139 3532 4.047627 TCTTGGGCCTATATCGATCTCA 57.952 45.455 0.00 0.00 0.00 3.27
3140 3533 3.764434 TCTTGGGCCTATATCGATCTCAC 59.236 47.826 0.00 0.00 0.00 3.51
3141 3534 2.092323 TGGGCCTATATCGATCTCACG 58.908 52.381 0.00 0.00 0.00 4.35
3142 3535 2.093106 GGGCCTATATCGATCTCACGT 58.907 52.381 0.00 0.00 34.70 4.49
3143 3536 2.097791 GGGCCTATATCGATCTCACGTC 59.902 54.545 0.00 0.00 34.70 4.34
3144 3537 3.011119 GGCCTATATCGATCTCACGTCT 58.989 50.000 0.00 0.00 34.70 4.18
3145 3538 4.190001 GGCCTATATCGATCTCACGTCTA 58.810 47.826 0.00 0.00 34.70 2.59
3146 3539 4.634883 GGCCTATATCGATCTCACGTCTAA 59.365 45.833 0.00 0.00 34.70 2.10
3147 3540 5.220700 GGCCTATATCGATCTCACGTCTAAG 60.221 48.000 0.00 0.00 34.70 2.18
3148 3541 5.220700 GCCTATATCGATCTCACGTCTAAGG 60.221 48.000 0.00 0.00 34.70 2.69
3149 3542 6.107343 CCTATATCGATCTCACGTCTAAGGA 58.893 44.000 0.00 0.00 34.70 3.36
3150 3543 5.866335 ATATCGATCTCACGTCTAAGGAC 57.134 43.478 0.00 0.00 38.97 3.85
3151 3544 3.263489 TCGATCTCACGTCTAAGGACT 57.737 47.619 0.00 0.00 40.10 3.85
3152 3545 4.397481 TCGATCTCACGTCTAAGGACTA 57.603 45.455 0.00 0.00 40.10 2.59
3153 3546 4.763073 TCGATCTCACGTCTAAGGACTAA 58.237 43.478 0.00 0.00 40.10 2.24
3154 3547 5.181009 TCGATCTCACGTCTAAGGACTAAA 58.819 41.667 0.00 0.00 40.10 1.85
3155 3548 5.821470 TCGATCTCACGTCTAAGGACTAAAT 59.179 40.000 0.00 0.00 40.10 1.40
3156 3549 6.988580 TCGATCTCACGTCTAAGGACTAAATA 59.011 38.462 0.00 0.00 40.10 1.40
3157 3550 7.496920 TCGATCTCACGTCTAAGGACTAAATAA 59.503 37.037 0.00 0.00 40.10 1.40
3158 3551 7.799447 CGATCTCACGTCTAAGGACTAAATAAG 59.201 40.741 0.00 0.00 40.10 1.73
3159 3552 7.934855 TCTCACGTCTAAGGACTAAATAAGT 57.065 36.000 0.00 0.00 42.80 2.24
3160 3553 7.759465 TCTCACGTCTAAGGACTAAATAAGTG 58.241 38.462 0.00 0.00 39.07 3.16
3161 3554 6.327934 TCACGTCTAAGGACTAAATAAGTGC 58.672 40.000 0.00 0.00 46.39 4.40
3166 3559 2.713927 GGACTAAATAAGTGCGCACG 57.286 50.000 32.94 19.84 39.07 5.34
3167 3560 1.267383 GGACTAAATAAGTGCGCACGC 60.267 52.381 32.94 12.73 39.07 5.34
3168 3561 0.725117 ACTAAATAAGTGCGCACGCC 59.275 50.000 32.94 11.91 41.09 5.68
3174 3567 1.778334 TAAGTGCGCACGCCATATAG 58.222 50.000 32.94 0.00 41.09 1.31
3188 3581 5.163237 ACGCCATATAGGATGTAGTTGGTTT 60.163 40.000 0.00 0.00 41.22 3.27
3250 3643 5.106830 GGTGGTTACGGTTGAATAGAAACAG 60.107 44.000 0.00 0.00 0.00 3.16
3304 3697 8.943909 AACTCCTAACTAATCTATGGAAAACG 57.056 34.615 0.00 0.00 0.00 3.60
3312 3705 3.764237 TCTATGGAAAACGCTATCCCC 57.236 47.619 0.00 0.00 34.68 4.81
3362 3759 1.881072 CGCCTGCATAGCCATCAGATT 60.881 52.381 3.48 0.00 0.00 2.40
3376 3773 7.208080 AGCCATCAGATTGATTTTGATTAAGC 58.792 34.615 0.00 0.00 34.28 3.09
3383 3780 5.369685 TTGATTTTGATTAAGCGCTCACA 57.630 34.783 12.06 6.01 0.00 3.58
3388 3785 1.275010 TGATTAAGCGCTCACACTGGA 59.725 47.619 12.06 0.00 0.00 3.86
3389 3786 2.093500 TGATTAAGCGCTCACACTGGAT 60.093 45.455 12.06 0.00 0.00 3.41
3404 3801 1.278985 CTGGATACCAGTCCTGTGCAA 59.721 52.381 9.36 0.00 45.82 4.08
3405 3802 1.003118 TGGATACCAGTCCTGTGCAAC 59.997 52.381 0.00 0.00 39.12 4.17
3409 3806 1.149174 CCAGTCCTGTGCAACCAGT 59.851 57.895 3.87 0.00 34.36 4.00
3410 3807 0.466189 CCAGTCCTGTGCAACCAGTT 60.466 55.000 3.87 0.00 34.36 3.16
3411 3808 1.392589 CAGTCCTGTGCAACCAGTTT 58.607 50.000 3.87 0.00 34.36 2.66
3412 3809 1.750778 CAGTCCTGTGCAACCAGTTTT 59.249 47.619 3.87 0.00 34.36 2.43
3474 3871 5.731686 GCAACAGAGGTCTTGTTTCAGAAAG 60.732 44.000 0.00 0.00 0.00 2.62
3475 3872 5.359194 ACAGAGGTCTTGTTTCAGAAAGA 57.641 39.130 0.00 0.00 0.00 2.52
3476 3873 5.745227 ACAGAGGTCTTGTTTCAGAAAGAA 58.255 37.500 5.42 5.42 34.33 2.52
3477 3874 6.180472 ACAGAGGTCTTGTTTCAGAAAGAAA 58.820 36.000 6.90 0.00 43.71 2.52
3528 3925 3.882888 TCAGCAACAGGTCTAGTTTTTGG 59.117 43.478 0.00 0.00 0.00 3.28
3533 3930 5.163550 GCAACAGGTCTAGTTTTTGGAAGTT 60.164 40.000 0.00 0.00 0.00 2.66
3543 3940 5.170748 AGTTTTTGGAAGTTTCTGCAACAG 58.829 37.500 0.00 0.00 37.93 3.16
3551 3948 4.689612 AGTTTCTGCAACAGAGGTCTTA 57.310 40.909 0.00 0.00 41.75 2.10
3557 3954 5.240891 TCTGCAACAGAGGTCTTATTTCAG 58.759 41.667 0.00 0.00 35.39 3.02
3561 3958 6.205464 TGCAACAGAGGTCTTATTTCAGAAAG 59.795 38.462 1.28 0.00 0.00 2.62
3620 4027 2.917933 TGTTTCAGAAGCATATCCCCG 58.082 47.619 0.00 0.00 0.00 5.73
3627 4034 0.185901 AAGCATATCCCCGGTTGCAT 59.814 50.000 0.00 0.00 37.56 3.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 3.449528 TTCATCTTCAGAGAGGCATCG 57.550 47.619 0.00 0.00 34.85 3.84
9 10 6.427547 CCTTATTTCATCTTCAGAGAGGCATC 59.572 42.308 0.00 0.00 34.85 3.91
10 11 6.126536 ACCTTATTTCATCTTCAGAGAGGCAT 60.127 38.462 0.00 0.00 34.85 4.40
11 12 5.190528 ACCTTATTTCATCTTCAGAGAGGCA 59.809 40.000 0.00 0.00 34.85 4.75
12 13 5.679601 ACCTTATTTCATCTTCAGAGAGGC 58.320 41.667 0.00 0.00 34.85 4.70
13 14 7.123355 AGACCTTATTTCATCTTCAGAGAGG 57.877 40.000 0.00 0.00 34.85 3.69
14 15 9.097257 GAAAGACCTTATTTCATCTTCAGAGAG 57.903 37.037 0.00 0.00 36.79 3.20
15 16 8.820831 AGAAAGACCTTATTTCATCTTCAGAGA 58.179 33.333 1.73 0.00 38.79 3.10
30 31 8.591940 GGGAGAAAACTAGTTAGAAAGACCTTA 58.408 37.037 8.92 0.00 0.00 2.69
31 32 7.451732 GGGAGAAAACTAGTTAGAAAGACCTT 58.548 38.462 8.92 0.00 0.00 3.50
32 33 6.295180 CGGGAGAAAACTAGTTAGAAAGACCT 60.295 42.308 8.92 0.00 0.00 3.85
33 34 5.868258 CGGGAGAAAACTAGTTAGAAAGACC 59.132 44.000 8.92 6.55 0.00 3.85
34 35 6.453943 ACGGGAGAAAACTAGTTAGAAAGAC 58.546 40.000 8.92 0.00 0.00 3.01
35 36 6.661304 ACGGGAGAAAACTAGTTAGAAAGA 57.339 37.500 8.92 0.00 0.00 2.52
36 37 6.147328 CCAACGGGAGAAAACTAGTTAGAAAG 59.853 42.308 8.92 0.73 35.59 2.62
37 38 5.993441 CCAACGGGAGAAAACTAGTTAGAAA 59.007 40.000 8.92 0.00 35.59 2.52
38 39 5.070847 ACCAACGGGAGAAAACTAGTTAGAA 59.929 40.000 8.92 0.00 38.05 2.10
39 40 4.590222 ACCAACGGGAGAAAACTAGTTAGA 59.410 41.667 8.92 0.00 38.05 2.10
40 41 4.891260 ACCAACGGGAGAAAACTAGTTAG 58.109 43.478 8.92 0.00 38.05 2.34
41 42 4.262592 GGACCAACGGGAGAAAACTAGTTA 60.263 45.833 8.92 0.00 38.05 2.24
42 43 3.495629 GGACCAACGGGAGAAAACTAGTT 60.496 47.826 1.12 1.12 38.05 2.24
43 44 2.038164 GGACCAACGGGAGAAAACTAGT 59.962 50.000 0.00 0.00 38.05 2.57
44 45 2.038033 TGGACCAACGGGAGAAAACTAG 59.962 50.000 0.00 0.00 38.05 2.57
45 46 2.048601 TGGACCAACGGGAGAAAACTA 58.951 47.619 0.00 0.00 38.05 2.24
46 47 0.841289 TGGACCAACGGGAGAAAACT 59.159 50.000 0.00 0.00 38.05 2.66
47 48 1.810755 GATGGACCAACGGGAGAAAAC 59.189 52.381 0.00 0.00 38.05 2.43
48 49 1.702957 AGATGGACCAACGGGAGAAAA 59.297 47.619 0.00 0.00 38.05 2.29
49 50 1.358152 AGATGGACCAACGGGAGAAA 58.642 50.000 0.00 0.00 38.05 2.52
50 51 2.108168 CTAGATGGACCAACGGGAGAA 58.892 52.381 0.00 0.00 38.05 2.87
51 52 1.006758 ACTAGATGGACCAACGGGAGA 59.993 52.381 0.00 0.00 38.05 3.71
52 53 1.486211 ACTAGATGGACCAACGGGAG 58.514 55.000 0.00 0.00 38.05 4.30
53 54 2.832643 TACTAGATGGACCAACGGGA 57.167 50.000 0.00 0.00 38.05 5.14
54 55 2.030185 CGATACTAGATGGACCAACGGG 60.030 54.545 0.00 0.00 41.29 5.28
55 56 2.621998 ACGATACTAGATGGACCAACGG 59.378 50.000 0.00 0.00 0.00 4.44
56 57 3.550233 CCACGATACTAGATGGACCAACG 60.550 52.174 0.00 0.00 33.80 4.10
57 58 3.243771 CCCACGATACTAGATGGACCAAC 60.244 52.174 0.00 0.00 33.80 3.77
58 59 2.963101 CCCACGATACTAGATGGACCAA 59.037 50.000 0.00 0.00 33.80 3.67
59 60 2.176148 TCCCACGATACTAGATGGACCA 59.824 50.000 0.00 0.00 33.80 4.02
60 61 2.872732 TCCCACGATACTAGATGGACC 58.127 52.381 0.00 0.00 33.80 4.46
61 62 3.256136 CCTTCCCACGATACTAGATGGAC 59.744 52.174 0.00 0.00 33.80 4.02
62 63 3.497332 CCTTCCCACGATACTAGATGGA 58.503 50.000 0.00 0.00 33.80 3.41
63 64 2.028930 GCCTTCCCACGATACTAGATGG 60.029 54.545 0.00 0.00 0.00 3.51
64 65 2.351835 CGCCTTCCCACGATACTAGATG 60.352 54.545 0.00 0.00 0.00 2.90
65 66 1.887198 CGCCTTCCCACGATACTAGAT 59.113 52.381 0.00 0.00 0.00 1.98
66 67 1.315690 CGCCTTCCCACGATACTAGA 58.684 55.000 0.00 0.00 0.00 2.43
67 68 0.318784 GCGCCTTCCCACGATACTAG 60.319 60.000 0.00 0.00 0.00 2.57
68 69 1.737816 GCGCCTTCCCACGATACTA 59.262 57.895 0.00 0.00 0.00 1.82
69 70 2.499685 GCGCCTTCCCACGATACT 59.500 61.111 0.00 0.00 0.00 2.12
70 71 2.340453 TACGCGCCTTCCCACGATAC 62.340 60.000 5.73 0.00 0.00 2.24
71 72 1.665264 TTACGCGCCTTCCCACGATA 61.665 55.000 5.73 0.00 0.00 2.92
72 73 2.901051 CTTACGCGCCTTCCCACGAT 62.901 60.000 5.73 0.00 0.00 3.73
73 74 3.636313 CTTACGCGCCTTCCCACGA 62.636 63.158 5.73 0.00 0.00 4.35
74 75 3.186047 CTTACGCGCCTTCCCACG 61.186 66.667 5.73 0.00 0.00 4.94
75 76 2.818274 CCTTACGCGCCTTCCCAC 60.818 66.667 5.73 0.00 0.00 4.61
76 77 3.315949 ACCTTACGCGCCTTCCCA 61.316 61.111 5.73 0.00 0.00 4.37
77 78 2.818274 CACCTTACGCGCCTTCCC 60.818 66.667 5.73 0.00 0.00 3.97
78 79 2.047560 ACACCTTACGCGCCTTCC 60.048 61.111 5.73 0.00 0.00 3.46
79 80 1.623973 GACACACCTTACGCGCCTTC 61.624 60.000 5.73 0.00 0.00 3.46
80 81 1.666872 GACACACCTTACGCGCCTT 60.667 57.895 5.73 0.00 0.00 4.35
81 82 2.048503 GACACACCTTACGCGCCT 60.049 61.111 5.73 0.00 0.00 5.52
82 83 1.226030 AAAGACACACCTTACGCGCC 61.226 55.000 5.73 0.00 0.00 6.53
83 84 0.110823 CAAAGACACACCTTACGCGC 60.111 55.000 5.73 0.00 0.00 6.86
84 85 1.493772 TCAAAGACACACCTTACGCG 58.506 50.000 3.53 3.53 0.00 6.01
85 86 2.806244 ACATCAAAGACACACCTTACGC 59.194 45.455 0.00 0.00 0.00 4.42
86 87 7.096599 CGATATACATCAAAGACACACCTTACG 60.097 40.741 0.00 0.00 0.00 3.18
87 88 7.306632 GCGATATACATCAAAGACACACCTTAC 60.307 40.741 0.00 0.00 0.00 2.34
88 89 6.700081 GCGATATACATCAAAGACACACCTTA 59.300 38.462 0.00 0.00 0.00 2.69
89 90 5.523916 GCGATATACATCAAAGACACACCTT 59.476 40.000 0.00 0.00 0.00 3.50
90 91 5.050490 GCGATATACATCAAAGACACACCT 58.950 41.667 0.00 0.00 0.00 4.00
91 92 4.808895 TGCGATATACATCAAAGACACACC 59.191 41.667 0.00 0.00 0.00 4.16
92 93 5.050769 CCTGCGATATACATCAAAGACACAC 60.051 44.000 0.00 0.00 0.00 3.82
93 94 5.049828 CCTGCGATATACATCAAAGACACA 58.950 41.667 0.00 0.00 0.00 3.72
94 95 4.449068 CCCTGCGATATACATCAAAGACAC 59.551 45.833 0.00 0.00 0.00 3.67
95 96 4.100963 ACCCTGCGATATACATCAAAGACA 59.899 41.667 0.00 0.00 0.00 3.41
96 97 4.632153 ACCCTGCGATATACATCAAAGAC 58.368 43.478 0.00 0.00 0.00 3.01
97 98 4.955811 ACCCTGCGATATACATCAAAGA 57.044 40.909 0.00 0.00 0.00 2.52
98 99 4.150627 CGAACCCTGCGATATACATCAAAG 59.849 45.833 0.00 0.00 0.00 2.77
99 100 4.055360 CGAACCCTGCGATATACATCAAA 58.945 43.478 0.00 0.00 0.00 2.69
100 101 3.319689 TCGAACCCTGCGATATACATCAA 59.680 43.478 0.00 0.00 32.09 2.57
101 102 2.888414 TCGAACCCTGCGATATACATCA 59.112 45.455 0.00 0.00 32.09 3.07
102 103 3.570926 TCGAACCCTGCGATATACATC 57.429 47.619 0.00 0.00 32.09 3.06
103 104 4.245660 CAATCGAACCCTGCGATATACAT 58.754 43.478 0.00 0.00 46.67 2.29
104 105 3.554129 CCAATCGAACCCTGCGATATACA 60.554 47.826 0.00 0.00 46.67 2.29
105 106 2.993899 CCAATCGAACCCTGCGATATAC 59.006 50.000 0.00 0.00 46.67 1.47
106 107 2.631062 ACCAATCGAACCCTGCGATATA 59.369 45.455 0.00 0.00 46.67 0.86
107 108 1.416401 ACCAATCGAACCCTGCGATAT 59.584 47.619 0.00 0.00 46.67 1.63
108 109 0.828022 ACCAATCGAACCCTGCGATA 59.172 50.000 0.00 0.00 46.67 2.92
110 111 1.375396 CACCAATCGAACCCTGCGA 60.375 57.895 0.00 0.00 42.48 5.10
111 112 1.635663 GACACCAATCGAACCCTGCG 61.636 60.000 0.00 0.00 0.00 5.18
112 113 0.321653 AGACACCAATCGAACCCTGC 60.322 55.000 0.00 0.00 0.00 4.85
113 114 1.001974 TGAGACACCAATCGAACCCTG 59.998 52.381 0.00 0.00 0.00 4.45
114 115 1.348064 TGAGACACCAATCGAACCCT 58.652 50.000 0.00 0.00 0.00 4.34
115 116 2.178912 TTGAGACACCAATCGAACCC 57.821 50.000 0.00 0.00 0.00 4.11
116 117 3.127030 GGAATTGAGACACCAATCGAACC 59.873 47.826 0.00 0.00 35.86 3.62
117 118 3.751175 TGGAATTGAGACACCAATCGAAC 59.249 43.478 0.00 0.00 35.86 3.95
118 119 4.002982 CTGGAATTGAGACACCAATCGAA 58.997 43.478 0.00 0.00 35.86 3.71
119 120 3.599343 CTGGAATTGAGACACCAATCGA 58.401 45.455 0.00 0.00 35.86 3.59
120 121 2.096496 GCTGGAATTGAGACACCAATCG 59.904 50.000 0.00 0.00 35.86 3.34
121 122 3.084039 TGCTGGAATTGAGACACCAATC 58.916 45.455 0.00 0.00 35.86 2.67
122 123 2.821969 GTGCTGGAATTGAGACACCAAT 59.178 45.455 0.00 0.00 38.30 3.16
123 124 2.229792 GTGCTGGAATTGAGACACCAA 58.770 47.619 0.00 0.00 31.85 3.67
124 125 1.545428 GGTGCTGGAATTGAGACACCA 60.545 52.381 15.50 0.00 45.45 4.17
125 126 1.168714 GGTGCTGGAATTGAGACACC 58.831 55.000 0.00 0.00 40.64 4.16
126 127 1.168714 GGGTGCTGGAATTGAGACAC 58.831 55.000 0.00 0.00 0.00 3.67
127 128 0.321564 CGGGTGCTGGAATTGAGACA 60.322 55.000 0.00 0.00 0.00 3.41
128 129 1.648467 GCGGGTGCTGGAATTGAGAC 61.648 60.000 0.00 0.00 38.39 3.36
129 130 1.377202 GCGGGTGCTGGAATTGAGA 60.377 57.895 0.00 0.00 38.39 3.27
130 131 3.190878 GCGGGTGCTGGAATTGAG 58.809 61.111 0.00 0.00 38.39 3.02
140 141 2.102161 CGGCATTAAAGCGGGTGC 59.898 61.111 2.60 0.00 43.24 5.01
141 142 2.798009 CCGGCATTAAAGCGGGTG 59.202 61.111 18.18 0.00 46.43 4.61
144 145 2.715624 GAGCCGGCATTAAAGCGG 59.284 61.111 31.54 3.50 34.64 5.52
145 146 2.051804 CTGGAGCCGGCATTAAAGCG 62.052 60.000 31.54 4.14 34.64 4.68
146 147 1.032114 ACTGGAGCCGGCATTAAAGC 61.032 55.000 31.54 8.10 0.00 3.51
147 148 2.325583 TACTGGAGCCGGCATTAAAG 57.674 50.000 31.54 19.77 0.00 1.85
148 149 2.237643 TCTTACTGGAGCCGGCATTAAA 59.762 45.455 31.54 13.53 0.00 1.52
149 150 1.834896 TCTTACTGGAGCCGGCATTAA 59.165 47.619 31.54 15.83 0.00 1.40
150 151 1.412710 CTCTTACTGGAGCCGGCATTA 59.587 52.381 31.54 12.95 0.00 1.90
151 152 0.179000 CTCTTACTGGAGCCGGCATT 59.821 55.000 31.54 9.09 0.00 3.56
152 153 1.690219 CCTCTTACTGGAGCCGGCAT 61.690 60.000 31.54 14.28 32.43 4.40
153 154 2.359169 CCTCTTACTGGAGCCGGCA 61.359 63.158 31.54 7.07 32.43 5.69
154 155 2.501610 CCTCTTACTGGAGCCGGC 59.498 66.667 21.89 21.89 32.43 6.13
155 156 2.501610 GCCTCTTACTGGAGCCGG 59.498 66.667 0.00 0.00 32.43 6.13
156 157 2.501610 GGCCTCTTACTGGAGCCG 59.498 66.667 0.00 0.00 32.43 5.52
157 158 2.501610 CGGCCTCTTACTGGAGCC 59.498 66.667 0.00 0.00 32.43 4.70
158 159 2.202946 GCGGCCTCTTACTGGAGC 60.203 66.667 0.00 0.00 32.43 4.70
159 160 2.105128 CGCGGCCTCTTACTGGAG 59.895 66.667 0.00 0.00 0.00 3.86
160 161 1.823169 AAACGCGGCCTCTTACTGGA 61.823 55.000 12.47 0.00 0.00 3.86
161 162 0.953960 AAAACGCGGCCTCTTACTGG 60.954 55.000 12.47 0.00 0.00 4.00
162 163 0.442699 GAAAACGCGGCCTCTTACTG 59.557 55.000 12.47 0.00 0.00 2.74
163 164 0.320697 AGAAAACGCGGCCTCTTACT 59.679 50.000 12.47 0.00 0.00 2.24
164 165 0.720027 GAGAAAACGCGGCCTCTTAC 59.280 55.000 12.47 0.00 0.00 2.34
165 166 0.606604 AGAGAAAACGCGGCCTCTTA 59.393 50.000 12.47 0.00 32.55 2.10
166 167 0.606604 TAGAGAAAACGCGGCCTCTT 59.393 50.000 20.68 0.57 37.25 2.85
167 168 0.606604 TTAGAGAAAACGCGGCCTCT 59.393 50.000 12.47 17.41 39.17 3.69
168 169 1.000145 CTTAGAGAAAACGCGGCCTC 59.000 55.000 12.47 10.92 0.00 4.70
169 170 0.320697 ACTTAGAGAAAACGCGGCCT 59.679 50.000 12.47 0.61 0.00 5.19
170 171 0.720027 GACTTAGAGAAAACGCGGCC 59.280 55.000 12.47 0.00 0.00 6.13
171 172 0.365859 CGACTTAGAGAAAACGCGGC 59.634 55.000 12.47 0.00 0.00 6.53
172 173 0.989890 CCGACTTAGAGAAAACGCGG 59.010 55.000 12.47 0.00 0.00 6.46
173 174 0.365859 GCCGACTTAGAGAAAACGCG 59.634 55.000 3.53 3.53 0.00 6.01
174 175 1.425412 TGCCGACTTAGAGAAAACGC 58.575 50.000 0.00 0.00 0.00 4.84
175 176 3.250744 TCATGCCGACTTAGAGAAAACG 58.749 45.455 0.00 0.00 0.00 3.60
176 177 4.092091 CACTCATGCCGACTTAGAGAAAAC 59.908 45.833 0.00 0.00 0.00 2.43
177 178 4.245660 CACTCATGCCGACTTAGAGAAAA 58.754 43.478 0.00 0.00 0.00 2.29
178 179 3.849911 CACTCATGCCGACTTAGAGAAA 58.150 45.455 0.00 0.00 0.00 2.52
179 180 2.417379 GCACTCATGCCGACTTAGAGAA 60.417 50.000 0.00 0.00 46.97 2.87
180 181 1.135139 GCACTCATGCCGACTTAGAGA 59.865 52.381 0.00 0.00 46.97 3.10
181 182 1.565305 GCACTCATGCCGACTTAGAG 58.435 55.000 0.00 0.00 46.97 2.43
182 183 3.741029 GCACTCATGCCGACTTAGA 57.259 52.632 0.00 0.00 46.97 2.10
217 218 4.760047 ATCTCCCACGCACCGCAC 62.760 66.667 0.00 0.00 0.00 5.34
218 219 4.758251 CATCTCCCACGCACCGCA 62.758 66.667 0.00 0.00 0.00 5.69
219 220 4.760047 ACATCTCCCACGCACCGC 62.760 66.667 0.00 0.00 0.00 5.68
220 221 1.234615 AAAACATCTCCCACGCACCG 61.235 55.000 0.00 0.00 0.00 4.94
221 222 0.958822 AAAAACATCTCCCACGCACC 59.041 50.000 0.00 0.00 0.00 5.01
237 238 0.336737 ACACCCTGGTCCACCAAAAA 59.663 50.000 0.00 0.00 46.97 1.94
238 239 0.106419 GACACCCTGGTCCACCAAAA 60.106 55.000 0.00 0.00 46.97 2.44
239 240 1.282653 TGACACCCTGGTCCACCAAA 61.283 55.000 0.00 0.00 46.97 3.28
240 241 1.694525 TGACACCCTGGTCCACCAA 60.695 57.895 0.00 0.00 46.97 3.67
241 242 2.040359 TGACACCCTGGTCCACCA 60.040 61.111 0.00 0.00 45.30 4.17
242 243 1.841556 TCTGACACCCTGGTCCACC 60.842 63.158 0.00 0.00 36.97 4.61
243 244 1.371558 GTCTGACACCCTGGTCCAC 59.628 63.158 2.24 0.00 36.97 4.02
244 245 2.207229 CGTCTGACACCCTGGTCCA 61.207 63.158 8.73 0.00 36.97 4.02
245 246 2.207924 ACGTCTGACACCCTGGTCC 61.208 63.158 8.73 0.00 36.97 4.46
246 247 1.006102 CACGTCTGACACCCTGGTC 60.006 63.158 8.73 0.00 38.29 4.02
247 248 0.468585 TACACGTCTGACACCCTGGT 60.469 55.000 8.73 0.00 0.00 4.00
248 249 0.038526 GTACACGTCTGACACCCTGG 60.039 60.000 8.73 0.00 0.00 4.45
249 250 0.671796 TGTACACGTCTGACACCCTG 59.328 55.000 8.73 0.02 0.00 4.45
250 251 1.272490 CATGTACACGTCTGACACCCT 59.728 52.381 8.73 0.00 0.00 4.34
251 252 1.671850 CCATGTACACGTCTGACACCC 60.672 57.143 8.73 0.00 0.00 4.61
252 253 1.710013 CCATGTACACGTCTGACACC 58.290 55.000 8.73 0.00 0.00 4.16
253 254 1.068474 GCCATGTACACGTCTGACAC 58.932 55.000 8.73 0.00 0.00 3.67
254 255 0.966179 AGCCATGTACACGTCTGACA 59.034 50.000 8.73 0.00 0.00 3.58
255 256 2.527100 GTAGCCATGTACACGTCTGAC 58.473 52.381 0.00 0.00 0.00 3.51
256 257 1.131693 CGTAGCCATGTACACGTCTGA 59.868 52.381 0.00 0.00 0.00 3.27
257 258 1.545759 CGTAGCCATGTACACGTCTG 58.454 55.000 0.00 0.00 0.00 3.51
258 259 0.454600 CCGTAGCCATGTACACGTCT 59.545 55.000 0.00 0.00 32.66 4.18
259 260 0.171903 ACCGTAGCCATGTACACGTC 59.828 55.000 0.00 0.00 32.66 4.34
260 261 0.171903 GACCGTAGCCATGTACACGT 59.828 55.000 0.00 0.00 32.66 4.49
261 262 0.526954 GGACCGTAGCCATGTACACG 60.527 60.000 0.00 0.00 0.00 4.49
262 263 0.526954 CGGACCGTAGCCATGTACAC 60.527 60.000 5.48 0.00 0.00 2.90
263 264 1.669049 CCGGACCGTAGCCATGTACA 61.669 60.000 13.94 0.00 0.00 2.90
264 265 1.066918 CCGGACCGTAGCCATGTAC 59.933 63.158 13.94 0.00 0.00 2.90
265 266 2.129146 CCCGGACCGTAGCCATGTA 61.129 63.158 13.94 0.00 0.00 2.29
266 267 3.467226 CCCGGACCGTAGCCATGT 61.467 66.667 13.94 0.00 0.00 3.21
267 268 4.910585 GCCCGGACCGTAGCCATG 62.911 72.222 13.94 0.00 0.00 3.66
284 285 3.434319 ATGCGAGCTTTGTGGGCG 61.434 61.111 0.00 0.00 34.52 6.13
285 286 1.660560 ATCATGCGAGCTTTGTGGGC 61.661 55.000 0.00 0.00 0.00 5.36
286 287 0.813184 AATCATGCGAGCTTTGTGGG 59.187 50.000 0.00 0.00 0.00 4.61
287 288 2.256174 CAAATCATGCGAGCTTTGTGG 58.744 47.619 0.00 0.00 0.00 4.17
288 289 2.659757 CACAAATCATGCGAGCTTTGTG 59.340 45.455 19.00 19.00 46.72 3.33
289 290 2.294233 ACACAAATCATGCGAGCTTTGT 59.706 40.909 7.16 7.16 41.22 2.83
290 291 2.912967 GACACAAATCATGCGAGCTTTG 59.087 45.455 0.00 6.14 35.30 2.77
291 292 2.095059 GGACACAAATCATGCGAGCTTT 60.095 45.455 0.00 0.00 0.00 3.51
292 293 1.470098 GGACACAAATCATGCGAGCTT 59.530 47.619 0.00 0.00 0.00 3.74
293 294 1.089920 GGACACAAATCATGCGAGCT 58.910 50.000 0.00 0.00 0.00 4.09
294 295 0.247814 CGGACACAAATCATGCGAGC 60.248 55.000 0.00 0.00 0.00 5.03
295 296 0.374758 CCGGACACAAATCATGCGAG 59.625 55.000 0.00 0.00 0.00 5.03
296 297 0.321210 ACCGGACACAAATCATGCGA 60.321 50.000 9.46 0.00 0.00 5.10
297 298 0.521291 AACCGGACACAAATCATGCG 59.479 50.000 9.46 0.00 0.00 4.73
298 299 2.723124 AAACCGGACACAAATCATGC 57.277 45.000 9.46 0.00 0.00 4.06
299 300 4.439974 CCCATAAACCGGACACAAATCATG 60.440 45.833 9.46 0.00 0.00 3.07
300 301 3.699038 CCCATAAACCGGACACAAATCAT 59.301 43.478 9.46 0.00 0.00 2.45
301 302 3.085533 CCCATAAACCGGACACAAATCA 58.914 45.455 9.46 0.00 0.00 2.57
302 303 3.349022 TCCCATAAACCGGACACAAATC 58.651 45.455 9.46 0.00 0.00 2.17
303 304 3.443145 TCCCATAAACCGGACACAAAT 57.557 42.857 9.46 0.00 0.00 2.32
304 305 2.953284 TCCCATAAACCGGACACAAA 57.047 45.000 9.46 0.00 0.00 2.83
305 306 3.443145 AATCCCATAAACCGGACACAA 57.557 42.857 9.46 0.00 0.00 3.33
306 307 3.244946 TGAAATCCCATAAACCGGACACA 60.245 43.478 9.46 0.00 0.00 3.72
307 308 3.349022 TGAAATCCCATAAACCGGACAC 58.651 45.455 9.46 0.00 0.00 3.67
308 309 3.264706 TCTGAAATCCCATAAACCGGACA 59.735 43.478 9.46 0.00 0.00 4.02
309 310 3.626217 GTCTGAAATCCCATAAACCGGAC 59.374 47.826 9.46 0.00 0.00 4.79
310 311 3.264706 TGTCTGAAATCCCATAAACCGGA 59.735 43.478 9.46 0.00 0.00 5.14
311 312 3.616219 TGTCTGAAATCCCATAAACCGG 58.384 45.455 0.00 0.00 0.00 5.28
312 313 4.142469 GGTTGTCTGAAATCCCATAAACCG 60.142 45.833 0.00 0.00 0.00 4.44
313 314 4.142469 CGGTTGTCTGAAATCCCATAAACC 60.142 45.833 0.00 0.00 32.93 3.27
314 315 4.142469 CCGGTTGTCTGAAATCCCATAAAC 60.142 45.833 0.00 0.00 0.00 2.01
315 316 4.013728 CCGGTTGTCTGAAATCCCATAAA 58.986 43.478 0.00 0.00 0.00 1.40
316 317 3.264706 TCCGGTTGTCTGAAATCCCATAA 59.735 43.478 0.00 0.00 0.00 1.90
317 318 2.841266 TCCGGTTGTCTGAAATCCCATA 59.159 45.455 0.00 0.00 0.00 2.74
318 319 1.633432 TCCGGTTGTCTGAAATCCCAT 59.367 47.619 0.00 0.00 0.00 4.00
319 320 1.060729 TCCGGTTGTCTGAAATCCCA 58.939 50.000 0.00 0.00 0.00 4.37
320 321 1.271163 TGTCCGGTTGTCTGAAATCCC 60.271 52.381 0.00 0.00 0.00 3.85
321 322 1.804748 GTGTCCGGTTGTCTGAAATCC 59.195 52.381 0.00 0.00 0.00 3.01
322 323 2.489971 TGTGTCCGGTTGTCTGAAATC 58.510 47.619 0.00 0.00 0.00 2.17
323 324 2.631160 TGTGTCCGGTTGTCTGAAAT 57.369 45.000 0.00 0.00 0.00 2.17
324 325 2.489971 GATGTGTCCGGTTGTCTGAAA 58.510 47.619 0.00 0.00 0.00 2.69
325 326 1.270625 GGATGTGTCCGGTTGTCTGAA 60.271 52.381 0.00 0.00 34.13 3.02
326 327 0.320374 GGATGTGTCCGGTTGTCTGA 59.680 55.000 0.00 0.00 34.13 3.27
327 328 2.840974 GGATGTGTCCGGTTGTCTG 58.159 57.895 0.00 0.00 34.13 3.51
336 337 4.101585 TCCTATTCATCTGTGGATGTGTCC 59.898 45.833 5.99 0.00 46.74 4.02
337 338 5.282055 TCCTATTCATCTGTGGATGTGTC 57.718 43.478 5.99 0.00 46.74 3.67
338 339 5.618236 CATCCTATTCATCTGTGGATGTGT 58.382 41.667 11.00 0.44 46.74 3.72
342 343 6.699242 ATGACATCCTATTCATCTGTGGAT 57.301 37.500 0.00 0.00 37.96 3.41
343 344 7.803487 ATATGACATCCTATTCATCTGTGGA 57.197 36.000 0.00 0.00 34.28 4.02
344 345 7.336176 CCAATATGACATCCTATTCATCTGTGG 59.664 40.741 0.00 0.00 34.28 4.17
345 346 8.098912 TCCAATATGACATCCTATTCATCTGTG 58.901 37.037 0.00 0.00 34.28 3.66
346 347 8.211030 TCCAATATGACATCCTATTCATCTGT 57.789 34.615 0.00 0.00 34.28 3.41
347 348 9.110502 CATCCAATATGACATCCTATTCATCTG 57.889 37.037 0.00 0.00 34.28 2.90
348 349 9.054580 TCATCCAATATGACATCCTATTCATCT 57.945 33.333 0.00 0.00 34.28 2.90
349 350 9.107177 GTCATCCAATATGACATCCTATTCATC 57.893 37.037 12.12 0.00 45.61 2.92
361 362 5.581605 ACGCATTTTGTCATCCAATATGAC 58.418 37.500 10.47 10.47 42.01 3.06
362 363 5.833406 ACGCATTTTGTCATCCAATATGA 57.167 34.783 8.89 0.00 42.01 2.15
363 364 6.035217 TGAACGCATTTTGTCATCCAATATG 58.965 36.000 0.00 0.00 42.21 1.78
364 365 6.206395 TGAACGCATTTTGTCATCCAATAT 57.794 33.333 0.00 0.00 31.81 1.28
365 366 5.392919 CCTGAACGCATTTTGTCATCCAATA 60.393 40.000 0.00 0.00 31.81 1.90
366 367 4.487948 CTGAACGCATTTTGTCATCCAAT 58.512 39.130 0.00 0.00 31.81 3.16
367 368 3.305267 CCTGAACGCATTTTGTCATCCAA 60.305 43.478 0.00 0.00 0.00 3.53
368 369 2.228582 CCTGAACGCATTTTGTCATCCA 59.771 45.455 0.00 0.00 0.00 3.41
369 370 2.867429 CCTGAACGCATTTTGTCATCC 58.133 47.619 0.00 0.00 0.00 3.51
370 371 2.253603 GCCTGAACGCATTTTGTCATC 58.746 47.619 0.00 0.00 0.00 2.92
371 372 1.612950 TGCCTGAACGCATTTTGTCAT 59.387 42.857 0.00 0.00 32.62 3.06
372 373 1.001487 CTGCCTGAACGCATTTTGTCA 60.001 47.619 0.00 0.00 38.30 3.58
373 374 1.689959 CTGCCTGAACGCATTTTGTC 58.310 50.000 0.00 0.00 38.30 3.18
374 375 0.318955 GCTGCCTGAACGCATTTTGT 60.319 50.000 0.00 0.00 38.30 2.83
375 376 0.038892 AGCTGCCTGAACGCATTTTG 60.039 50.000 0.00 0.00 38.30 2.44
376 377 0.675633 AAGCTGCCTGAACGCATTTT 59.324 45.000 0.00 0.00 38.30 1.82
377 378 0.675633 AAAGCTGCCTGAACGCATTT 59.324 45.000 0.00 0.00 38.30 2.32
378 379 0.242017 GAAAGCTGCCTGAACGCATT 59.758 50.000 0.00 0.00 38.30 3.56
379 380 1.589716 GGAAAGCTGCCTGAACGCAT 61.590 55.000 0.00 0.00 38.30 4.73
380 381 2.260869 GGAAAGCTGCCTGAACGCA 61.261 57.895 0.00 0.00 37.19 5.24
381 382 2.260869 TGGAAAGCTGCCTGAACGC 61.261 57.895 7.34 0.00 0.00 4.84
382 383 1.165907 TGTGGAAAGCTGCCTGAACG 61.166 55.000 7.34 0.00 0.00 3.95
383 384 0.312102 GTGTGGAAAGCTGCCTGAAC 59.688 55.000 7.34 0.00 0.00 3.18
384 385 1.165907 CGTGTGGAAAGCTGCCTGAA 61.166 55.000 7.34 0.00 0.00 3.02
385 386 1.597854 CGTGTGGAAAGCTGCCTGA 60.598 57.895 7.34 0.00 0.00 3.86
386 387 1.447317 AACGTGTGGAAAGCTGCCTG 61.447 55.000 7.34 0.00 0.00 4.85
387 388 0.751643 AAACGTGTGGAAAGCTGCCT 60.752 50.000 7.34 0.00 0.00 4.75
388 389 0.594796 CAAACGTGTGGAAAGCTGCC 60.595 55.000 0.00 0.00 0.00 4.85
389 390 1.208642 GCAAACGTGTGGAAAGCTGC 61.209 55.000 8.05 0.00 0.00 5.25
390 391 0.929824 CGCAAACGTGTGGAAAGCTG 60.930 55.000 8.05 0.00 33.53 4.24
391 392 1.355210 CGCAAACGTGTGGAAAGCT 59.645 52.632 8.05 0.00 33.53 3.74
392 393 3.902234 CGCAAACGTGTGGAAAGC 58.098 55.556 8.05 0.00 33.53 3.51
398 399 2.854777 TCAAATTTTCCGCAAACGTGTG 59.145 40.909 0.00 0.00 37.70 3.82
399 400 3.112580 CTCAAATTTTCCGCAAACGTGT 58.887 40.909 0.00 0.00 37.70 4.49
400 401 2.470999 CCTCAAATTTTCCGCAAACGTG 59.529 45.455 0.00 0.00 37.70 4.49
401 402 2.544903 CCCTCAAATTTTCCGCAAACGT 60.545 45.455 0.00 0.00 37.70 3.99
402 403 2.058057 CCCTCAAATTTTCCGCAAACG 58.942 47.619 0.00 0.00 39.67 3.60
403 404 3.057019 GACCCTCAAATTTTCCGCAAAC 58.943 45.455 0.00 0.00 0.00 2.93
404 405 2.036604 GGACCCTCAAATTTTCCGCAAA 59.963 45.455 0.00 0.00 0.00 3.68
405 406 1.616374 GGACCCTCAAATTTTCCGCAA 59.384 47.619 0.00 0.00 0.00 4.85
406 407 1.203001 AGGACCCTCAAATTTTCCGCA 60.203 47.619 1.15 0.00 0.00 5.69
407 408 1.545841 AGGACCCTCAAATTTTCCGC 58.454 50.000 1.15 0.00 0.00 5.54
408 409 2.890945 ACAAGGACCCTCAAATTTTCCG 59.109 45.455 1.15 0.00 0.00 4.30
409 410 4.558697 CGAACAAGGACCCTCAAATTTTCC 60.559 45.833 0.00 0.00 0.00 3.13
410 411 4.277423 TCGAACAAGGACCCTCAAATTTTC 59.723 41.667 0.00 0.00 0.00 2.29
411 412 4.211920 TCGAACAAGGACCCTCAAATTTT 58.788 39.130 0.00 0.00 0.00 1.82
412 413 3.821033 CTCGAACAAGGACCCTCAAATTT 59.179 43.478 0.00 0.00 0.00 1.82
413 414 3.072476 TCTCGAACAAGGACCCTCAAATT 59.928 43.478 0.00 0.00 0.00 1.82
414 415 2.637872 TCTCGAACAAGGACCCTCAAAT 59.362 45.455 0.00 0.00 0.00 2.32
415 416 2.043992 TCTCGAACAAGGACCCTCAAA 58.956 47.619 0.00 0.00 0.00 2.69
416 417 1.343465 GTCTCGAACAAGGACCCTCAA 59.657 52.381 0.00 0.00 0.00 3.02
417 418 0.966920 GTCTCGAACAAGGACCCTCA 59.033 55.000 0.00 0.00 0.00 3.86
418 419 0.109226 CGTCTCGAACAAGGACCCTC 60.109 60.000 0.00 0.00 0.00 4.30
419 420 1.965219 CGTCTCGAACAAGGACCCT 59.035 57.895 0.00 0.00 0.00 4.34
420 421 1.737008 GCGTCTCGAACAAGGACCC 60.737 63.158 0.00 0.00 0.00 4.46
421 422 1.737008 GGCGTCTCGAACAAGGACC 60.737 63.158 0.00 0.00 0.00 4.46
422 423 0.524862 TAGGCGTCTCGAACAAGGAC 59.475 55.000 0.00 0.00 0.00 3.85
423 424 1.068055 GTTAGGCGTCTCGAACAAGGA 60.068 52.381 0.00 0.00 0.00 3.36
424 425 1.067776 AGTTAGGCGTCTCGAACAAGG 60.068 52.381 0.00 0.00 0.00 3.61
425 426 2.349297 AGTTAGGCGTCTCGAACAAG 57.651 50.000 0.00 0.00 0.00 3.16
426 427 2.806608 AAGTTAGGCGTCTCGAACAA 57.193 45.000 0.00 0.00 0.00 2.83
512 513 3.055819 TGGTTGATGCTACTGTTCCTCTC 60.056 47.826 0.00 0.00 0.00 3.20
593 601 3.242944 GCTTTTTCAGGTGAGTTTTTCGC 59.757 43.478 0.00 0.00 35.52 4.70
594 602 3.796717 GGCTTTTTCAGGTGAGTTTTTCG 59.203 43.478 0.00 0.00 0.00 3.46
597 605 3.513515 TGTGGCTTTTTCAGGTGAGTTTT 59.486 39.130 0.00 0.00 0.00 2.43
630 638 5.326069 TGGATTCCGTTAGATTCCCAAAAA 58.674 37.500 0.00 0.00 42.21 1.94
632 640 4.577988 TGGATTCCGTTAGATTCCCAAA 57.422 40.909 0.00 0.00 42.21 3.28
633 641 4.263550 TGTTGGATTCCGTTAGATTCCCAA 60.264 41.667 0.00 0.00 42.21 4.12
634 642 3.264706 TGTTGGATTCCGTTAGATTCCCA 59.735 43.478 0.00 0.00 42.21 4.37
635 643 3.881220 TGTTGGATTCCGTTAGATTCCC 58.119 45.455 0.00 0.00 42.21 3.97
636 644 4.881850 ACATGTTGGATTCCGTTAGATTCC 59.118 41.667 0.00 0.00 42.90 3.01
637 645 6.292919 GCTACATGTTGGATTCCGTTAGATTC 60.293 42.308 2.30 0.00 0.00 2.52
638 646 5.527582 GCTACATGTTGGATTCCGTTAGATT 59.472 40.000 2.30 0.00 0.00 2.40
639 647 5.057149 GCTACATGTTGGATTCCGTTAGAT 58.943 41.667 2.30 0.00 0.00 1.98
641 649 3.245284 CGCTACATGTTGGATTCCGTTAG 59.755 47.826 2.30 0.00 0.00 2.34
642 650 3.191669 CGCTACATGTTGGATTCCGTTA 58.808 45.455 2.30 0.00 0.00 3.18
643 651 2.006888 CGCTACATGTTGGATTCCGTT 58.993 47.619 2.30 0.00 0.00 4.44
645 653 1.593006 GACGCTACATGTTGGATTCCG 59.407 52.381 2.30 3.14 0.00 4.30
647 655 4.154195 ACAAAGACGCTACATGTTGGATTC 59.846 41.667 2.30 0.00 0.00 2.52
655 663 1.135689 GGCCAACAAAGACGCTACATG 60.136 52.381 0.00 0.00 0.00 3.21
659 667 1.070105 ACGGCCAACAAAGACGCTA 59.930 52.632 2.24 0.00 0.00 4.26
664 672 1.527380 GGTCCACGGCCAACAAAGA 60.527 57.895 2.24 0.00 0.00 2.52
665 673 2.561037 GGGTCCACGGCCAACAAAG 61.561 63.158 2.24 0.00 0.00 2.77
666 674 2.519780 GGGTCCACGGCCAACAAA 60.520 61.111 2.24 0.00 0.00 2.83
677 685 1.475280 CTACGAAATGACGAGGGTCCA 59.525 52.381 0.00 0.00 42.73 4.02
680 688 1.475682 GTCCTACGAAATGACGAGGGT 59.524 52.381 0.00 0.00 34.21 4.34
683 691 3.119955 TCACTGTCCTACGAAATGACGAG 60.120 47.826 0.00 0.00 37.03 4.18
684 692 2.815503 TCACTGTCCTACGAAATGACGA 59.184 45.455 0.00 0.00 37.03 4.20
685 693 3.211803 TCACTGTCCTACGAAATGACG 57.788 47.619 0.00 0.00 39.31 4.35
723 737 4.345859 TTCCATTGTCTCACTTTACCGT 57.654 40.909 0.00 0.00 0.00 4.83
747 761 2.917971 GCACACTCTCACTACTTTAGCG 59.082 50.000 0.00 0.00 0.00 4.26
756 770 1.123077 TTGTCCTGCACACTCTCACT 58.877 50.000 0.00 0.00 33.41 3.41
757 771 1.802960 CATTGTCCTGCACACTCTCAC 59.197 52.381 0.00 0.00 33.41 3.51
758 772 1.271001 CCATTGTCCTGCACACTCTCA 60.271 52.381 0.00 0.00 33.41 3.27
759 773 1.002430 TCCATTGTCCTGCACACTCTC 59.998 52.381 0.00 0.00 33.41 3.20
760 774 1.059098 TCCATTGTCCTGCACACTCT 58.941 50.000 0.00 0.00 33.41 3.24
761 775 1.896220 TTCCATTGTCCTGCACACTC 58.104 50.000 0.00 0.00 33.41 3.51
762 776 2.233271 CTTTCCATTGTCCTGCACACT 58.767 47.619 0.00 0.00 33.41 3.55
763 777 1.956477 ACTTTCCATTGTCCTGCACAC 59.044 47.619 0.00 0.00 33.41 3.82
764 778 1.955778 CACTTTCCATTGTCCTGCACA 59.044 47.619 0.00 0.00 0.00 4.57
765 779 2.227388 CTCACTTTCCATTGTCCTGCAC 59.773 50.000 0.00 0.00 0.00 4.57
766 780 2.106338 TCTCACTTTCCATTGTCCTGCA 59.894 45.455 0.00 0.00 0.00 4.41
767 781 2.485814 GTCTCACTTTCCATTGTCCTGC 59.514 50.000 0.00 0.00 0.00 4.85
768 782 3.077359 GGTCTCACTTTCCATTGTCCTG 58.923 50.000 0.00 0.00 0.00 3.86
769 783 2.711009 TGGTCTCACTTTCCATTGTCCT 59.289 45.455 0.00 0.00 0.00 3.85
770 784 3.077359 CTGGTCTCACTTTCCATTGTCC 58.923 50.000 0.00 0.00 0.00 4.02
799 813 1.878102 CGTGGTGGGAAGAGAAAGGTG 60.878 57.143 0.00 0.00 0.00 4.00
923 948 0.179163 GTTCCAAATGTAGCGCCTGC 60.179 55.000 2.29 0.00 43.24 4.85
924 949 0.451783 GGTTCCAAATGTAGCGCCTG 59.548 55.000 2.29 0.00 0.00 4.85
965 990 3.129502 CTACCTCGTCCGCGGTCA 61.130 66.667 27.15 2.93 38.89 4.02
988 1013 4.720902 CTCCATGGCACGCACCCA 62.721 66.667 6.96 0.00 36.66 4.51
989 1014 4.722700 ACTCCATGGCACGCACCC 62.723 66.667 6.96 0.00 0.00 4.61
990 1015 3.127533 GACTCCATGGCACGCACC 61.128 66.667 6.96 0.00 0.00 5.01
994 1019 1.742880 CCACTGACTCCATGGCACG 60.743 63.158 6.96 0.00 0.00 5.34
1073 1119 3.064987 CTCCTGACCAGCGTACCGG 62.065 68.421 0.00 0.00 0.00 5.28
1077 1123 1.685765 ATGCCTCCTGACCAGCGTA 60.686 57.895 0.00 0.00 0.00 4.42
1923 2039 2.971901 TAGACTGACAGAGTGTGGGA 57.028 50.000 10.08 0.00 33.83 4.37
1924 2040 2.828520 ACATAGACTGACAGAGTGTGGG 59.171 50.000 10.08 0.00 33.83 4.61
1934 2050 5.180304 TCGATCTAGATGCACATAGACTGAC 59.820 44.000 10.74 4.51 31.09 3.51
2717 3093 0.887836 ACAGCATGCACACACTGGAG 60.888 55.000 21.98 0.00 42.53 3.86
2885 3276 3.961480 ATGTTGCACACACTAGCTAGA 57.039 42.857 27.45 0.00 38.61 2.43
2897 3288 2.399396 AGCGTTGTGTTATGTTGCAC 57.601 45.000 0.00 0.00 36.26 4.57
2929 3320 4.334481 GGTTTAATGTGGATCTACCGGTTG 59.666 45.833 15.04 12.18 42.61 3.77
2954 3345 8.207545 GGGAGTCTGTGATCAAGATAACTATTT 58.792 37.037 0.00 0.00 0.00 1.40
2955 3346 7.345653 TGGGAGTCTGTGATCAAGATAACTATT 59.654 37.037 0.00 0.00 0.00 1.73
2957 3348 6.194967 TGGGAGTCTGTGATCAAGATAACTA 58.805 40.000 0.00 0.00 0.00 2.24
2960 3351 5.426509 ACATGGGAGTCTGTGATCAAGATAA 59.573 40.000 0.00 0.00 0.00 1.75
2962 3353 3.779183 ACATGGGAGTCTGTGATCAAGAT 59.221 43.478 0.00 0.00 0.00 2.40
2963 3354 3.176411 ACATGGGAGTCTGTGATCAAGA 58.824 45.455 0.00 0.00 0.00 3.02
2964 3355 3.623906 ACATGGGAGTCTGTGATCAAG 57.376 47.619 0.00 0.00 0.00 3.02
2965 3356 3.327464 TCAACATGGGAGTCTGTGATCAA 59.673 43.478 0.00 0.00 0.00 2.57
2967 3358 3.616956 TCAACATGGGAGTCTGTGATC 57.383 47.619 0.00 0.00 0.00 2.92
2998 3389 6.064060 AGTTTGAACTGATGGAAAGATGTGA 58.936 36.000 0.00 0.00 37.98 3.58
3006 3397 5.451798 GCTCCAAAAGTTTGAACTGATGGAA 60.452 40.000 21.48 12.03 45.80 3.53
3013 3404 4.381932 CCAGTTGCTCCAAAAGTTTGAACT 60.382 41.667 5.34 4.48 40.55 3.01
3015 3406 3.678529 GCCAGTTGCTCCAAAAGTTTGAA 60.679 43.478 5.34 0.00 37.39 2.69
3016 3407 2.159114 GCCAGTTGCTCCAAAAGTTTGA 60.159 45.455 5.34 0.00 37.39 2.69
3017 3408 2.204237 GCCAGTTGCTCCAAAAGTTTG 58.796 47.619 0.00 0.00 36.87 2.93
3018 3409 2.602257 GCCAGTTGCTCCAAAAGTTT 57.398 45.000 0.00 0.00 36.87 2.66
3029 3420 1.246056 TTCATGCTCCAGCCAGTTGC 61.246 55.000 0.00 0.00 41.18 4.17
3030 3421 1.471119 ATTCATGCTCCAGCCAGTTG 58.529 50.000 0.00 0.00 41.18 3.16
3031 3422 2.097825 GAATTCATGCTCCAGCCAGTT 58.902 47.619 0.00 0.00 41.18 3.16
3032 3423 1.005097 TGAATTCATGCTCCAGCCAGT 59.995 47.619 3.38 0.00 41.18 4.00
3043 3434 8.593492 TTGACTCGGATAATAGTGAATTCATG 57.407 34.615 12.12 0.00 0.00 3.07
3072 3465 2.030540 GGCGGGGTTTTCAACTAAAGAC 60.031 50.000 0.00 0.00 0.00 3.01
3079 3472 1.299544 CGTTGGCGGGGTTTTCAAC 60.300 57.895 0.00 0.00 36.93 3.18
3085 3478 0.968393 AATAATGCGTTGGCGGGGTT 60.968 50.000 0.08 0.00 44.10 4.11
3087 3480 1.025812 TTAATAATGCGTTGGCGGGG 58.974 50.000 0.08 0.00 44.10 5.73
3090 3483 8.587950 TCTTTTTATTTTAATAATGCGTTGGCG 58.412 29.630 0.08 0.00 44.10 5.69
3112 3505 5.825593 TCGATATAGGCCCAAGAATCTTT 57.174 39.130 0.00 0.00 0.00 2.52
3113 3506 5.723887 AGATCGATATAGGCCCAAGAATCTT 59.276 40.000 0.00 0.00 0.00 2.40
3114 3507 5.276440 AGATCGATATAGGCCCAAGAATCT 58.724 41.667 0.00 0.00 0.00 2.40
3115 3508 5.127845 TGAGATCGATATAGGCCCAAGAATC 59.872 44.000 0.00 0.00 0.00 2.52
3117 3510 4.220821 GTGAGATCGATATAGGCCCAAGAA 59.779 45.833 0.00 0.00 0.00 2.52
3119 3512 3.428180 CGTGAGATCGATATAGGCCCAAG 60.428 52.174 0.00 0.00 0.00 3.61
3122 3515 2.093106 ACGTGAGATCGATATAGGCCC 58.907 52.381 0.00 0.00 34.70 5.80
3123 3516 3.011119 AGACGTGAGATCGATATAGGCC 58.989 50.000 0.00 0.00 34.70 5.19
3124 3517 5.220700 CCTTAGACGTGAGATCGATATAGGC 60.221 48.000 0.00 0.00 34.70 3.93
3125 3518 6.036300 GTCCTTAGACGTGAGATCGATATAGG 59.964 46.154 0.00 0.00 32.18 2.57
3127 3520 6.964741 GTCCTTAGACGTGAGATCGATATA 57.035 41.667 0.00 0.00 32.18 0.86
3141 3534 5.005490 GTGCGCACTTATTTAGTCCTTAGAC 59.995 44.000 32.55 0.00 43.89 2.59
3142 3535 5.107133 GTGCGCACTTATTTAGTCCTTAGA 58.893 41.667 32.55 0.00 33.85 2.10
3143 3536 4.026804 CGTGCGCACTTATTTAGTCCTTAG 60.027 45.833 35.27 12.28 33.85 2.18
3144 3537 3.861113 CGTGCGCACTTATTTAGTCCTTA 59.139 43.478 35.27 0.00 33.85 2.69
3145 3538 2.671396 CGTGCGCACTTATTTAGTCCTT 59.329 45.455 35.27 0.00 33.85 3.36
3146 3539 2.268298 CGTGCGCACTTATTTAGTCCT 58.732 47.619 35.27 0.00 33.85 3.85
3147 3540 1.267383 GCGTGCGCACTTATTTAGTCC 60.267 52.381 35.27 7.56 41.49 3.85
3148 3541 1.267383 GGCGTGCGCACTTATTTAGTC 60.267 52.381 35.27 17.70 44.11 2.59
3149 3542 0.725117 GGCGTGCGCACTTATTTAGT 59.275 50.000 35.27 0.00 44.11 2.24
3150 3543 0.724549 TGGCGTGCGCACTTATTTAG 59.275 50.000 35.27 20.23 44.11 1.85
3151 3544 1.374560 ATGGCGTGCGCACTTATTTA 58.625 45.000 35.27 17.11 44.11 1.40
3152 3545 1.374560 TATGGCGTGCGCACTTATTT 58.625 45.000 35.27 19.28 44.11 1.40
3153 3546 1.593196 ATATGGCGTGCGCACTTATT 58.407 45.000 35.27 20.60 44.11 1.40
3154 3547 2.337583 CTATATGGCGTGCGCACTTAT 58.662 47.619 35.27 26.45 44.11 1.73
3155 3548 1.604438 CCTATATGGCGTGCGCACTTA 60.604 52.381 35.27 22.20 44.11 2.24
3156 3549 0.880278 CCTATATGGCGTGCGCACTT 60.880 55.000 35.27 20.27 44.11 3.16
3157 3550 1.300931 CCTATATGGCGTGCGCACT 60.301 57.895 35.27 20.86 44.11 4.40
3158 3551 0.670546 ATCCTATATGGCGTGCGCAC 60.671 55.000 30.42 30.42 44.11 5.34
3159 3552 0.670239 CATCCTATATGGCGTGCGCA 60.670 55.000 18.36 5.66 44.11 6.09
3160 3553 0.670546 ACATCCTATATGGCGTGCGC 60.671 55.000 8.17 8.17 41.06 6.09
3161 3554 2.094700 ACTACATCCTATATGGCGTGCG 60.095 50.000 0.00 0.00 35.26 5.34
3162 3555 3.594603 ACTACATCCTATATGGCGTGC 57.405 47.619 0.00 0.00 35.26 5.34
3163 3556 4.245660 CCAACTACATCCTATATGGCGTG 58.754 47.826 0.00 0.00 35.26 5.34
3164 3557 3.901844 ACCAACTACATCCTATATGGCGT 59.098 43.478 0.00 0.00 35.26 5.68
3165 3558 4.537135 ACCAACTACATCCTATATGGCG 57.463 45.455 0.00 0.00 35.26 5.69
3166 3559 6.016276 CCAAAACCAACTACATCCTATATGGC 60.016 42.308 0.00 0.00 35.26 4.40
3167 3560 7.060421 ACCAAAACCAACTACATCCTATATGG 58.940 38.462 0.00 0.00 37.10 2.74
3168 3561 9.621629 TTACCAAAACCAACTACATCCTATATG 57.378 33.333 0.00 0.00 0.00 1.78
3174 3567 6.644248 AACTTACCAAAACCAACTACATCC 57.356 37.500 0.00 0.00 0.00 3.51
3188 3581 4.566070 CCAAGTATCCGGGAAACTTACCAA 60.566 45.833 14.10 0.00 32.35 3.67
3304 3697 2.844839 AGTCGGCTGGGGGATAGC 60.845 66.667 0.00 0.00 40.41 2.97
3312 3705 3.190849 CGTGCATCAGTCGGCTGG 61.191 66.667 18.55 2.63 42.78 4.85
3355 3752 7.035840 AGCGCTTAATCAAAATCAATCTGAT 57.964 32.000 2.64 0.00 39.09 2.90
3362 3759 4.455533 AGTGTGAGCGCTTAATCAAAATCA 59.544 37.500 13.26 0.00 29.98 2.57
3376 3773 3.352447 CTGGTATCCAGTGTGAGCG 57.648 57.895 7.55 0.00 45.82 5.03
3388 3785 1.003580 CTGGTTGCACAGGACTGGTAT 59.996 52.381 4.14 0.00 34.84 2.73
3389 3786 0.396435 CTGGTTGCACAGGACTGGTA 59.604 55.000 4.14 0.00 34.84 3.25
3426 3823 5.063880 AGAAACCTTCTGAAACAATACGCT 58.936 37.500 0.00 0.00 38.91 5.07
3440 3837 2.550180 GACCTCTGTTGCAGAAACCTTC 59.450 50.000 0.37 0.00 40.18 3.46
3477 3874 5.529581 AACTTCACCATCGAACCATTTTT 57.470 34.783 0.00 0.00 0.00 1.94
3505 3902 4.338118 CCAAAAACTAGACCTGTTGCTGAA 59.662 41.667 0.00 0.00 0.00 3.02
3506 3903 3.882888 CCAAAAACTAGACCTGTTGCTGA 59.117 43.478 0.00 0.00 0.00 4.26
3507 3904 3.882888 TCCAAAAACTAGACCTGTTGCTG 59.117 43.478 0.00 0.00 0.00 4.41
3508 3905 4.164843 TCCAAAAACTAGACCTGTTGCT 57.835 40.909 0.00 0.00 0.00 3.91
3509 3906 4.338400 ACTTCCAAAAACTAGACCTGTTGC 59.662 41.667 0.00 0.00 0.00 4.17
3510 3907 6.451064 AACTTCCAAAAACTAGACCTGTTG 57.549 37.500 0.00 0.00 0.00 3.33
3511 3908 6.890268 AGAAACTTCCAAAAACTAGACCTGTT 59.110 34.615 0.00 0.00 0.00 3.16
3512 3909 6.318900 CAGAAACTTCCAAAAACTAGACCTGT 59.681 38.462 0.00 0.00 0.00 4.00
3513 3910 6.729187 CAGAAACTTCCAAAAACTAGACCTG 58.271 40.000 0.00 0.00 0.00 4.00
3514 3911 5.299531 GCAGAAACTTCCAAAAACTAGACCT 59.700 40.000 0.00 0.00 0.00 3.85
3528 3925 3.471680 AGACCTCTGTTGCAGAAACTTC 58.528 45.455 0.37 0.00 40.18 3.01
3533 3930 5.620206 TGAAATAAGACCTCTGTTGCAGAA 58.380 37.500 0.37 0.00 40.18 3.02
3582 3984 5.360714 TGAAACAAGAGCCACAGAAGAAAAT 59.639 36.000 0.00 0.00 0.00 1.82
3588 3990 3.558931 TCTGAAACAAGAGCCACAGAA 57.441 42.857 0.00 0.00 32.66 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.