Multiple sequence alignment - TraesCS7D01G504600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G504600 chr7D 100.000 3443 0 0 1 3443 610624404 610620962 0.000000e+00 6359.0
1 TraesCS7D01G504600 chr7D 94.276 1852 101 5 760 2609 608122522 608124370 0.000000e+00 2828.0
2 TraesCS7D01G504600 chr7D 93.143 1123 58 3 1444 2566 514346918 514345815 0.000000e+00 1629.0
3 TraesCS7D01G504600 chr7D 97.230 686 17 1 1 686 608120595 608121278 0.000000e+00 1160.0
4 TraesCS7D01G504600 chr7D 87.001 677 52 15 778 1453 514353626 514352985 0.000000e+00 730.0
5 TraesCS7D01G504600 chr7D 94.748 457 23 1 2552 3008 600277958 600277503 0.000000e+00 710.0
6 TraesCS7D01G504600 chr7D 94.143 461 26 1 2548 3008 514345802 514345343 0.000000e+00 701.0
7 TraesCS7D01G504600 chr7D 89.706 136 14 0 1 136 608118095 608118230 1.270000e-39 174.0
8 TraesCS7D01G504600 chr7D 88.971 136 15 0 1 136 610648680 610648545 5.910000e-38 169.0
9 TraesCS7D01G504600 chr7D 93.939 66 2 1 2888 2951 600273515 600273450 7.860000e-17 99.0
10 TraesCS7D01G504600 chr7D 93.939 66 2 1 2888 2951 610603034 610602969 7.860000e-17 99.0
11 TraesCS7D01G504600 chr7D 82.178 101 5 4 2924 3014 608135417 608135514 1.330000e-09 75.0
12 TraesCS7D01G504600 chr7B 91.584 2329 147 28 694 3008 695262214 695259921 0.000000e+00 3169.0
13 TraesCS7D01G504600 chr7B 90.444 2051 154 24 694 2733 693439472 693441491 0.000000e+00 2663.0
14 TraesCS7D01G504600 chr7B 90.244 2050 156 23 694 2733 698974155 698976170 0.000000e+00 2638.0
15 TraesCS7D01G504600 chr7B 90.284 1935 158 15 684 2609 698503481 698505394 0.000000e+00 2505.0
16 TraesCS7D01G504600 chr7B 87.098 2209 197 51 694 2879 694824963 694822820 0.000000e+00 2420.0
17 TraesCS7D01G504600 chr7B 92.102 1684 122 7 930 2609 684982566 684980890 0.000000e+00 2362.0
18 TraesCS7D01G504600 chr7B 93.163 1097 71 2 1517 2609 697385641 697384545 0.000000e+00 1607.0
19 TraesCS7D01G504600 chr7B 91.144 734 59 3 1880 2609 699157919 699158650 0.000000e+00 990.0
20 TraesCS7D01G504600 chr7B 90.200 551 54 0 977 1527 697394514 697393964 0.000000e+00 719.0
21 TraesCS7D01G504600 chr7B 96.774 217 7 0 424 640 694825712 694825496 2.530000e-96 363.0
22 TraesCS7D01G504600 chr7B 95.475 221 10 0 424 644 693438719 693438939 1.520000e-93 353.0
23 TraesCS7D01G504600 chr7B 95.475 221 10 0 424 644 698973402 698973622 1.520000e-93 353.0
24 TraesCS7D01G504600 chr7B 94.643 224 12 0 424 647 695262975 695262752 7.070000e-92 348.0
25 TraesCS7D01G504600 chr7B 94.118 221 13 0 424 644 698502738 698502958 1.530000e-88 337.0
26 TraesCS7D01G504600 chr7B 85.274 292 29 5 2591 2879 698506192 698506472 4.350000e-74 289.0
27 TraesCS7D01G504600 chr7B 93.182 132 9 0 1 132 693438589 693438720 9.750000e-46 195.0
28 TraesCS7D01G504600 chr7B 93.182 132 9 0 1 132 694825842 694825711 9.750000e-46 195.0
29 TraesCS7D01G504600 chr7B 93.182 132 9 0 1 132 698973272 698973403 9.750000e-46 195.0
30 TraesCS7D01G504600 chr7B 92.481 133 9 1 1 132 695263106 695262974 4.540000e-44 189.0
31 TraesCS7D01G504600 chr7B 91.176 136 12 0 1 136 695277407 695277272 5.870000e-43 185.0
32 TraesCS7D01G504600 chr7B 89.781 137 13 1 1 136 698487924 698488060 1.270000e-39 174.0
33 TraesCS7D01G504600 chr7B 87.591 137 4 5 2888 3014 697383429 697383296 2.770000e-31 147.0
34 TraesCS7D01G504600 chr7B 85.401 137 7 10 2888 3014 684979793 684979660 2.790000e-26 130.0
35 TraesCS7D01G504600 chr7B 85.714 126 8 7 2888 3003 698506654 698506779 1.300000e-24 124.0
36 TraesCS7D01G504600 chr7B 93.548 62 2 1 2993 3052 60459111 60459172 1.320000e-14 91.6
37 TraesCS7D01G504600 chr7B 93.548 62 3 1 2992 3052 743278832 743278893 1.320000e-14 91.6
38 TraesCS7D01G504600 chr7A 87.489 2206 177 34 694 2879 700535557 700533431 0.000000e+00 2453.0
39 TraesCS7D01G504600 chr7A 88.095 210 22 3 436 644 700536007 700535800 2.650000e-61 246.0
40 TraesCS7D01G504600 chr7A 87.831 189 21 1 3052 3238 720728649 720728837 1.610000e-53 220.0
41 TraesCS7D01G504600 chr7A 90.909 121 10 1 2888 3008 700533138 700533019 9.890000e-36 161.0
42 TraesCS7D01G504600 chr7A 96.552 58 0 2 2997 3052 1976408 1976351 1.020000e-15 95.3
43 TraesCS7D01G504600 chr5D 90.878 296 26 1 131 425 210677899 210678194 2.490000e-106 396.0
44 TraesCS7D01G504600 chr5D 88.103 311 34 3 121 428 40917095 40916785 1.950000e-97 366.0
45 TraesCS7D01G504600 chr2A 89.967 299 29 1 131 428 544357661 544357363 5.390000e-103 385.0
46 TraesCS7D01G504600 chr2A 80.814 344 37 11 3052 3368 19577159 19577500 3.430000e-60 243.0
47 TraesCS7D01G504600 chr2A 94.915 59 2 1 2994 3052 18298960 18299017 1.320000e-14 91.6
48 TraesCS7D01G504600 chr6D 89.298 299 32 0 130 428 124947678 124947380 3.240000e-100 375.0
49 TraesCS7D01G504600 chr4B 89.262 298 31 1 130 426 621443577 621443874 4.200000e-99 372.0
50 TraesCS7D01G504600 chr4B 80.290 345 39 11 3052 3369 645643129 645642787 2.070000e-57 233.0
51 TraesCS7D01G504600 chr4B 80.290 345 39 11 3052 3369 645814608 645814266 2.070000e-57 233.0
52 TraesCS7D01G504600 chr4B 85.792 183 24 2 3052 3234 650787699 650787879 3.510000e-45 193.0
53 TraesCS7D01G504600 chr4B 88.235 119 14 0 3251 3369 180221589 180221471 3.580000e-30 143.0
54 TraesCS7D01G504600 chr4B 94.030 67 4 0 3074 3140 658202919 658202853 6.080000e-18 102.0
55 TraesCS7D01G504600 chr4B 92.063 63 3 2 3003 3064 580507350 580507289 1.700000e-13 87.9
56 TraesCS7D01G504600 chr2D 88.816 304 32 2 131 432 87426615 87426918 4.200000e-99 372.0
57 TraesCS7D01G504600 chr2B 89.189 296 32 0 130 425 535614097 535614392 1.510000e-98 370.0
58 TraesCS7D01G504600 chr2B 79.751 321 34 13 3079 3369 72601556 72601875 1.620000e-48 204.0
59 TraesCS7D01G504600 chr6B 88.103 311 33 4 122 429 538068047 538067738 1.950000e-97 366.0
60 TraesCS7D01G504600 chr6B 87.338 308 36 3 125 430 454462978 454463284 1.970000e-92 350.0
61 TraesCS7D01G504600 chr4D 88.333 300 35 0 131 430 118151158 118151457 9.080000e-96 361.0
62 TraesCS7D01G504600 chr4D 87.948 307 33 3 129 432 466134933 466135238 3.270000e-95 359.0
63 TraesCS7D01G504600 chr4D 83.706 313 23 12 3085 3369 6227297 6227609 1.570000e-68 270.0
64 TraesCS7D01G504600 chr4D 84.228 298 20 12 3099 3369 42175889 42175592 7.330000e-67 265.0
65 TraesCS7D01G504600 chr4D 83.387 313 24 12 3085 3369 42191732 42191420 7.330000e-67 265.0
66 TraesCS7D01G504600 chr4D 100.000 50 0 0 3003 3052 386541810 386541859 3.660000e-15 93.5
67 TraesCS7D01G504600 chr3A 87.500 304 36 2 130 432 9488734 9489036 1.970000e-92 350.0
68 TraesCS7D01G504600 chr5B 86.624 314 40 2 121 432 310178343 310178656 2.540000e-91 346.0
69 TraesCS7D01G504600 chr5A 86.667 315 39 3 121 432 113416901 113416587 2.540000e-91 346.0
70 TraesCS7D01G504600 chr5A 87.736 106 13 0 3264 3369 618487989 618488094 1.300000e-24 124.0
71 TraesCS7D01G504600 chr4A 86.624 314 40 2 121 432 571419866 571420179 2.540000e-91 346.0
72 TraesCS7D01G504600 chr4A 94.828 58 1 2 2995 3052 45537118 45537063 4.730000e-14 89.8
73 TraesCS7D01G504600 chrUn 98.113 53 1 0 3003 3055 22556889 22556941 3.660000e-15 93.5
74 TraesCS7D01G504600 chr3B 95.000 60 2 1 2994 3052 805367835 805367776 3.660000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G504600 chr7D 610620962 610624404 3442 True 6359.000000 6359 100.000000 1 3443 1 chr7D.!!$R3 3442
1 TraesCS7D01G504600 chr7D 608118095 608124370 6275 False 1387.333333 2828 93.737333 1 2609 3 chr7D.!!$F2 2608
2 TraesCS7D01G504600 chr7D 514345343 514346918 1575 True 1165.000000 1629 93.643000 1444 3008 2 chr7D.!!$R5 1564
3 TraesCS7D01G504600 chr7D 514352985 514353626 641 True 730.000000 730 87.001000 778 1453 1 chr7D.!!$R1 675
4 TraesCS7D01G504600 chr7D 600273450 600277958 4508 True 404.500000 710 94.343500 2552 3008 2 chr7D.!!$R6 456
5 TraesCS7D01G504600 chr7B 684979660 684982566 2906 True 1246.000000 2362 88.751500 930 3014 2 chr7B.!!$R3 2084
6 TraesCS7D01G504600 chr7B 695259921 695263106 3185 True 1235.333333 3169 92.902667 1 3008 3 chr7B.!!$R5 3007
7 TraesCS7D01G504600 chr7B 693438589 693441491 2902 False 1070.333333 2663 93.033667 1 2733 3 chr7B.!!$F5 2732
8 TraesCS7D01G504600 chr7B 698973272 698976170 2898 False 1062.000000 2638 92.967000 1 2733 3 chr7B.!!$F7 2732
9 TraesCS7D01G504600 chr7B 694822820 694825842 3022 True 992.666667 2420 92.351333 1 2879 3 chr7B.!!$R4 2878
10 TraesCS7D01G504600 chr7B 699157919 699158650 731 False 990.000000 990 91.144000 1880 2609 1 chr7B.!!$F3 729
11 TraesCS7D01G504600 chr7B 697383296 697385641 2345 True 877.000000 1607 90.377000 1517 3014 2 chr7B.!!$R6 1497
12 TraesCS7D01G504600 chr7B 698502738 698506779 4041 False 813.750000 2505 88.847500 424 3003 4 chr7B.!!$F6 2579
13 TraesCS7D01G504600 chr7B 697393964 697394514 550 True 719.000000 719 90.200000 977 1527 1 chr7B.!!$R2 550
14 TraesCS7D01G504600 chr7A 700533019 700536007 2988 True 953.333333 2453 88.831000 436 3008 3 chr7A.!!$R2 2572

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
272 274 0.036164 TGGGCGTACATGCTTTCAGT 59.964 50.0 0.00 0.0 34.52 3.41 F
395 397 0.370273 GTCGCGATGCACAACCTAAG 59.630 55.0 14.06 0.0 0.00 2.18 F
629 631 0.603569 GTGACACGAGAGGATGTGGT 59.396 55.0 0.00 0.0 40.39 4.16 F
1335 5543 0.533755 CCGGGATCACTGCCTTCATC 60.534 60.0 0.00 0.0 0.00 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1114 5322 0.108138 GACAGGCTGGCGTAAGTGAT 60.108 55.0 20.34 0.0 41.68 3.06 R
1317 5525 0.178767 TGATGAAGGCAGTGATCCCG 59.821 55.0 0.00 0.0 0.00 5.14 R
2007 6226 0.899720 CAAGGAGCCCTGTACCGTTA 59.100 55.0 0.00 0.0 32.13 3.18 R
3040 8464 0.386476 TTACTGTATACCCGGCAGCG 59.614 55.0 0.00 0.0 33.87 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.056322 GGTTCATGCTTTGCAAGATTCCT 60.056 43.478 0.00 0.00 43.62 3.36
130 132 8.906867 CCATACAAACATGGTGAAGAAATCTAT 58.093 33.333 5.73 0.00 40.62 1.98
134 136 9.167311 ACAAACATGGTGAAGAAATCTATACTC 57.833 33.333 5.73 0.00 0.00 2.59
135 137 8.616076 CAAACATGGTGAAGAAATCTATACTCC 58.384 37.037 0.00 0.00 0.00 3.85
136 138 6.831976 ACATGGTGAAGAAATCTATACTCCC 58.168 40.000 0.00 0.00 0.00 4.30
138 140 6.732896 TGGTGAAGAAATCTATACTCCCTC 57.267 41.667 0.00 0.00 0.00 4.30
139 141 5.302059 TGGTGAAGAAATCTATACTCCCTCG 59.698 44.000 0.00 0.00 0.00 4.63
140 142 5.279056 GGTGAAGAAATCTATACTCCCTCGG 60.279 48.000 0.00 0.00 0.00 4.63
141 143 5.302313 GTGAAGAAATCTATACTCCCTCGGT 59.698 44.000 0.00 0.00 0.00 4.69
142 144 5.535406 TGAAGAAATCTATACTCCCTCGGTC 59.465 44.000 0.00 0.00 0.00 4.79
143 145 5.327737 AGAAATCTATACTCCCTCGGTCT 57.672 43.478 0.00 0.00 0.00 3.85
144 146 6.451292 AGAAATCTATACTCCCTCGGTCTA 57.549 41.667 0.00 0.00 0.00 2.59
145 147 6.478129 AGAAATCTATACTCCCTCGGTCTAG 58.522 44.000 0.00 0.00 0.00 2.43
146 148 4.847990 ATCTATACTCCCTCGGTCTAGG 57.152 50.000 0.00 0.00 36.30 3.02
149 151 1.293062 TACTCCCTCGGTCTAGGTGT 58.707 55.000 0.00 0.00 34.56 4.16
150 152 1.293062 ACTCCCTCGGTCTAGGTGTA 58.707 55.000 0.00 0.00 34.56 2.90
151 153 1.851653 ACTCCCTCGGTCTAGGTGTAT 59.148 52.381 0.00 0.00 34.56 2.29
153 155 3.656751 ACTCCCTCGGTCTAGGTGTATAT 59.343 47.826 0.00 0.00 34.56 0.86
156 158 3.757493 CCCTCGGTCTAGGTGTATATGTC 59.243 52.174 0.00 0.00 34.56 3.06
158 160 4.215827 CCTCGGTCTAGGTGTATATGTCAC 59.784 50.000 0.00 4.86 35.36 3.67
172 174 8.875803 GTGTATATGTCACCTTACGAAAATCAA 58.124 33.333 0.00 0.00 0.00 2.57
173 175 9.438228 TGTATATGTCACCTTACGAAAATCAAA 57.562 29.630 0.00 0.00 0.00 2.69
179 181 9.226606 TGTCACCTTACGAAAATCAAATAATCT 57.773 29.630 0.00 0.00 0.00 2.40
180 182 9.704098 GTCACCTTACGAAAATCAAATAATCTC 57.296 33.333 0.00 0.00 0.00 2.75
181 183 9.443323 TCACCTTACGAAAATCAAATAATCTCA 57.557 29.630 0.00 0.00 0.00 3.27
188 190 9.965824 ACGAAAATCAAATAATCTCAAAACACT 57.034 25.926 0.00 0.00 0.00 3.55
193 195 9.860898 AATCAAATAATCTCAAAACACTTAGGC 57.139 29.630 0.00 0.00 0.00 3.93
194 196 7.526608 TCAAATAATCTCAAAACACTTAGGCG 58.473 34.615 0.00 0.00 0.00 5.52
195 197 3.831715 AATCTCAAAACACTTAGGCGC 57.168 42.857 0.00 0.00 0.00 6.53
196 198 1.144969 TCTCAAAACACTTAGGCGCG 58.855 50.000 0.00 0.00 0.00 6.86
197 199 0.165944 CTCAAAACACTTAGGCGCGG 59.834 55.000 8.83 0.00 0.00 6.46
199 201 0.385473 CAAAACACTTAGGCGCGGTG 60.385 55.000 8.83 9.75 37.05 4.94
212 214 3.806316 GCGCGGTGCATTAACTATTAT 57.194 42.857 8.83 0.00 45.45 1.28
213 215 3.732943 GCGCGGTGCATTAACTATTATC 58.267 45.455 8.83 0.00 45.45 1.75
214 216 3.432252 GCGCGGTGCATTAACTATTATCT 59.568 43.478 8.83 0.00 45.45 1.98
215 217 4.434330 GCGCGGTGCATTAACTATTATCTC 60.434 45.833 8.83 0.00 45.45 2.75
220 222 7.281484 CGGTGCATTAACTATTATCTCGTTTC 58.719 38.462 0.00 0.00 0.00 2.78
221 223 7.169308 CGGTGCATTAACTATTATCTCGTTTCT 59.831 37.037 0.00 0.00 0.00 2.52
222 224 9.472361 GGTGCATTAACTATTATCTCGTTTCTA 57.528 33.333 0.00 0.00 0.00 2.10
241 243 9.968743 CGTTTCTAGTTTCTTAACATATCAACC 57.031 33.333 0.00 0.00 36.70 3.77
252 254 9.330063 TCTTAACATATCAACCAATAAGAGCTG 57.670 33.333 0.00 0.00 0.00 4.24
254 256 6.932356 ACATATCAACCAATAAGAGCTGTG 57.068 37.500 0.00 0.00 0.00 3.66
255 257 5.824624 ACATATCAACCAATAAGAGCTGTGG 59.175 40.000 0.00 0.00 37.17 4.17
256 258 3.071874 TCAACCAATAAGAGCTGTGGG 57.928 47.619 0.00 0.00 35.32 4.61
257 259 1.474077 CAACCAATAAGAGCTGTGGGC 59.526 52.381 0.00 0.00 42.19 5.36
267 269 2.040544 GCTGTGGGCGTACATGCTT 61.041 57.895 0.00 0.00 34.52 3.91
269 271 0.447801 CTGTGGGCGTACATGCTTTC 59.552 55.000 0.00 0.00 34.52 2.62
270 272 0.250510 TGTGGGCGTACATGCTTTCA 60.251 50.000 0.00 0.00 34.52 2.69
271 273 0.447801 GTGGGCGTACATGCTTTCAG 59.552 55.000 0.00 0.00 34.52 3.02
272 274 0.036164 TGGGCGTACATGCTTTCAGT 59.964 50.000 0.00 0.00 34.52 3.41
273 275 0.447801 GGGCGTACATGCTTTCAGTG 59.552 55.000 0.00 0.00 34.52 3.66
274 276 1.438651 GGCGTACATGCTTTCAGTGA 58.561 50.000 0.00 0.00 34.52 3.41
275 277 1.128692 GGCGTACATGCTTTCAGTGAC 59.871 52.381 0.00 0.00 34.52 3.67
277 279 2.480419 GCGTACATGCTTTCAGTGACTT 59.520 45.455 0.00 0.00 0.00 3.01
278 280 3.665323 GCGTACATGCTTTCAGTGACTTG 60.665 47.826 0.00 0.00 0.00 3.16
279 281 3.740832 CGTACATGCTTTCAGTGACTTGA 59.259 43.478 0.00 0.00 0.00 3.02
280 282 4.143242 CGTACATGCTTTCAGTGACTTGAG 60.143 45.833 0.00 0.00 0.00 3.02
282 284 3.812053 ACATGCTTTCAGTGACTTGAGAC 59.188 43.478 0.00 0.00 0.00 3.36
283 285 3.827008 TGCTTTCAGTGACTTGAGACT 57.173 42.857 0.00 0.00 0.00 3.24
284 286 4.937201 TGCTTTCAGTGACTTGAGACTA 57.063 40.909 0.00 0.00 0.00 2.59
286 288 3.991121 GCTTTCAGTGACTTGAGACTACC 59.009 47.826 0.00 0.00 0.00 3.18
287 289 4.501571 GCTTTCAGTGACTTGAGACTACCA 60.502 45.833 0.00 0.00 0.00 3.25
288 290 5.601662 CTTTCAGTGACTTGAGACTACCAA 58.398 41.667 0.00 0.00 0.00 3.67
292 294 4.508124 CAGTGACTTGAGACTACCAAACAC 59.492 45.833 0.00 0.00 34.40 3.32
293 295 3.489785 GTGACTTGAGACTACCAAACACG 59.510 47.826 0.00 0.00 0.00 4.49
294 296 3.382227 TGACTTGAGACTACCAAACACGA 59.618 43.478 0.00 0.00 0.00 4.35
295 297 3.714391 ACTTGAGACTACCAAACACGAC 58.286 45.455 0.00 0.00 0.00 4.34
297 299 4.202223 ACTTGAGACTACCAAACACGACAT 60.202 41.667 0.00 0.00 0.00 3.06
298 300 3.649073 TGAGACTACCAAACACGACATG 58.351 45.455 0.00 0.00 0.00 3.21
299 301 2.412089 GAGACTACCAAACACGACATGC 59.588 50.000 0.00 0.00 0.00 4.06
300 302 2.139917 GACTACCAAACACGACATGCA 58.860 47.619 0.00 0.00 0.00 3.96
301 303 2.546368 GACTACCAAACACGACATGCAA 59.454 45.455 0.00 0.00 0.00 4.08
302 304 3.146066 ACTACCAAACACGACATGCAAT 58.854 40.909 0.00 0.00 0.00 3.56
303 305 3.568007 ACTACCAAACACGACATGCAATT 59.432 39.130 0.00 0.00 0.00 2.32
304 306 2.741612 ACCAAACACGACATGCAATTG 58.258 42.857 0.00 0.00 0.00 2.32
305 307 2.100584 ACCAAACACGACATGCAATTGT 59.899 40.909 7.40 0.00 0.00 2.71
306 308 3.122297 CCAAACACGACATGCAATTGTT 58.878 40.909 7.40 0.00 31.74 2.83
307 309 4.202060 ACCAAACACGACATGCAATTGTTA 60.202 37.500 7.40 0.00 30.28 2.41
308 310 4.382457 CCAAACACGACATGCAATTGTTAG 59.618 41.667 7.40 0.00 30.28 2.34
309 311 4.829064 AACACGACATGCAATTGTTAGT 57.171 36.364 7.40 3.00 0.00 2.24
310 312 4.829064 ACACGACATGCAATTGTTAGTT 57.171 36.364 7.40 0.00 0.00 2.24
311 313 4.783242 ACACGACATGCAATTGTTAGTTC 58.217 39.130 7.40 0.00 0.00 3.01
313 315 5.048782 ACACGACATGCAATTGTTAGTTCAT 60.049 36.000 7.40 0.00 0.00 2.57
314 316 5.509272 CACGACATGCAATTGTTAGTTCATC 59.491 40.000 7.40 0.00 0.00 2.92
315 317 4.725280 CGACATGCAATTGTTAGTTCATCG 59.275 41.667 7.40 3.07 0.00 3.84
316 318 4.414852 ACATGCAATTGTTAGTTCATCGC 58.585 39.130 7.40 0.00 0.00 4.58
317 319 4.082841 ACATGCAATTGTTAGTTCATCGCA 60.083 37.500 7.40 0.00 0.00 5.10
318 320 4.082274 TGCAATTGTTAGTTCATCGCAG 57.918 40.909 7.40 0.00 0.00 5.18
319 321 3.119884 TGCAATTGTTAGTTCATCGCAGG 60.120 43.478 7.40 0.00 0.00 4.85
320 322 3.429085 CAATTGTTAGTTCATCGCAGGC 58.571 45.455 0.00 0.00 0.00 4.85
322 324 2.177394 TGTTAGTTCATCGCAGGCAA 57.823 45.000 0.00 0.00 0.00 4.52
323 325 2.710377 TGTTAGTTCATCGCAGGCAAT 58.290 42.857 0.00 0.00 0.00 3.56
324 326 2.419673 TGTTAGTTCATCGCAGGCAATG 59.580 45.455 0.00 0.00 0.00 2.82
326 328 1.538047 AGTTCATCGCAGGCAATGTT 58.462 45.000 0.00 0.00 0.00 2.71
327 329 2.710377 AGTTCATCGCAGGCAATGTTA 58.290 42.857 0.00 0.00 0.00 2.41
328 330 3.282021 AGTTCATCGCAGGCAATGTTAT 58.718 40.909 0.00 0.00 0.00 1.89
329 331 3.696051 AGTTCATCGCAGGCAATGTTATT 59.304 39.130 0.00 0.00 0.00 1.40
330 332 4.881273 AGTTCATCGCAGGCAATGTTATTA 59.119 37.500 0.00 0.00 0.00 0.98
331 333 5.356751 AGTTCATCGCAGGCAATGTTATTAA 59.643 36.000 0.00 0.00 0.00 1.40
332 334 6.039717 AGTTCATCGCAGGCAATGTTATTAAT 59.960 34.615 0.00 0.00 0.00 1.40
333 335 6.389830 TCATCGCAGGCAATGTTATTAATT 57.610 33.333 0.00 0.00 0.00 1.40
334 336 7.503521 TCATCGCAGGCAATGTTATTAATTA 57.496 32.000 0.00 0.00 0.00 1.40
336 338 5.757886 TCGCAGGCAATGTTATTAATTAGC 58.242 37.500 0.00 0.00 0.00 3.09
337 339 5.298026 TCGCAGGCAATGTTATTAATTAGCA 59.702 36.000 0.00 0.00 0.00 3.49
339 341 6.475076 CGCAGGCAATGTTATTAATTAGCAAA 59.525 34.615 0.00 0.00 0.00 3.68
341 343 9.474920 GCAGGCAATGTTATTAATTAGCAAATA 57.525 29.630 0.00 0.00 0.00 1.40
359 361 8.324163 AGCAAATAAACATTAAGTTCTCTCGT 57.676 30.769 0.00 0.00 40.26 4.18
361 363 9.394477 GCAAATAAACATTAAGTTCTCTCGTTT 57.606 29.630 0.00 0.00 40.26 3.60
380 382 0.951558 TTTTTCTCAGCCTTGGTCGC 59.048 50.000 0.00 0.00 0.00 5.19
381 383 1.227999 TTTTCTCAGCCTTGGTCGCG 61.228 55.000 0.00 0.00 0.00 5.87
382 384 2.094757 TTTCTCAGCCTTGGTCGCGA 62.095 55.000 3.71 3.71 0.00 5.87
384 386 2.125552 TCAGCCTTGGTCGCGATG 60.126 61.111 14.06 4.38 0.00 3.84
385 387 3.869272 CAGCCTTGGTCGCGATGC 61.869 66.667 14.06 10.65 0.00 3.91
386 388 4.393155 AGCCTTGGTCGCGATGCA 62.393 61.111 14.06 0.00 0.00 3.96
390 392 1.154413 CTTGGTCGCGATGCACAAC 60.154 57.895 14.06 0.00 0.00 3.32
391 393 2.513065 CTTGGTCGCGATGCACAACC 62.513 60.000 14.06 8.18 0.00 3.77
394 396 1.017177 GGTCGCGATGCACAACCTAA 61.017 55.000 14.06 0.00 0.00 2.69
395 397 0.370273 GTCGCGATGCACAACCTAAG 59.630 55.000 14.06 0.00 0.00 2.18
397 399 1.134818 TCGCGATGCACAACCTAAGAT 60.135 47.619 3.71 0.00 0.00 2.40
399 401 2.279741 GCGATGCACAACCTAAGATGA 58.720 47.619 0.00 0.00 0.00 2.92
400 402 2.030946 GCGATGCACAACCTAAGATGAC 59.969 50.000 0.00 0.00 0.00 3.06
402 404 3.935203 CGATGCACAACCTAAGATGACTT 59.065 43.478 0.00 0.00 39.81 3.01
403 405 5.109210 CGATGCACAACCTAAGATGACTTA 58.891 41.667 0.00 0.00 37.53 2.24
405 407 6.923508 CGATGCACAACCTAAGATGACTTATA 59.076 38.462 0.00 0.00 37.85 0.98
408 410 6.816640 TGCACAACCTAAGATGACTTATACAC 59.183 38.462 0.00 0.00 37.85 2.90
412 414 8.915036 ACAACCTAAGATGACTTATACACCTAG 58.085 37.037 0.00 0.00 37.85 3.02
413 415 9.132923 CAACCTAAGATGACTTATACACCTAGA 57.867 37.037 0.00 0.00 37.85 2.43
415 417 7.444792 ACCTAAGATGACTTATACACCTAGACG 59.555 40.741 0.00 0.00 37.85 4.18
416 418 6.636562 AAGATGACTTATACACCTAGACGG 57.363 41.667 0.00 0.00 34.28 4.79
417 419 5.938279 AGATGACTTATACACCTAGACGGA 58.062 41.667 0.00 0.00 36.31 4.69
418 420 5.998981 AGATGACTTATACACCTAGACGGAG 59.001 44.000 0.00 0.00 36.31 4.63
419 421 4.458397 TGACTTATACACCTAGACGGAGG 58.542 47.826 0.00 0.00 42.89 4.30
420 422 4.164796 TGACTTATACACCTAGACGGAGGA 59.835 45.833 7.23 0.00 39.15 3.71
505 507 1.227527 TGTGGAGGAAGCGTGTGTG 60.228 57.895 0.00 0.00 0.00 3.82
570 572 7.609097 AGCTAAAGATATGAGAGGTTGATGA 57.391 36.000 0.00 0.00 0.00 2.92
629 631 0.603569 GTGACACGAGAGGATGTGGT 59.396 55.000 0.00 0.00 40.39 4.16
661 3465 1.203287 TGACAGATCTCAAGACAGGCG 59.797 52.381 0.00 0.00 0.00 5.52
665 3469 2.361757 CAGATCTCAAGACAGGCGATCT 59.638 50.000 0.00 0.00 40.90 2.75
669 3473 1.205655 CTCAAGACAGGCGATCTTCCA 59.794 52.381 3.63 0.00 34.08 3.53
686 3490 1.395045 CCACTGCATCTCCGCTCCTA 61.395 60.000 0.00 0.00 0.00 2.94
687 3491 0.678395 CACTGCATCTCCGCTCCTAT 59.322 55.000 0.00 0.00 0.00 2.57
688 3492 1.069823 CACTGCATCTCCGCTCCTATT 59.930 52.381 0.00 0.00 0.00 1.73
689 3493 2.297315 CACTGCATCTCCGCTCCTATTA 59.703 50.000 0.00 0.00 0.00 0.98
690 3494 3.056250 CACTGCATCTCCGCTCCTATTAT 60.056 47.826 0.00 0.00 0.00 1.28
691 3495 3.056250 ACTGCATCTCCGCTCCTATTATG 60.056 47.826 0.00 0.00 0.00 1.90
739 4363 1.226746 GAGTTATGTATGGGCGGTGC 58.773 55.000 0.00 0.00 0.00 5.01
761 4388 2.698855 TGAGGTTTCTAGATGCTGGC 57.301 50.000 0.00 0.00 0.00 4.85
1114 5322 1.069090 GGCTTCACCGTCACAGTCA 59.931 57.895 0.00 0.00 0.00 3.41
1227 5435 3.234730 GATGACCTCCCCGCCGAT 61.235 66.667 0.00 0.00 0.00 4.18
1266 5474 2.573869 CTCACCGTCATCAGCCGT 59.426 61.111 0.00 0.00 0.00 5.68
1270 5478 4.457496 CCGTCATCAGCCGTGCCT 62.457 66.667 0.00 0.00 0.00 4.75
1335 5543 0.533755 CCGGGATCACTGCCTTCATC 60.534 60.000 0.00 0.00 0.00 2.92
1399 5607 2.577593 GTCTGCCTGGGTACGTCC 59.422 66.667 0.00 0.00 0.00 4.79
1412 5620 2.440409 GTACGTCCTCTACACCTCCAA 58.560 52.381 0.00 0.00 0.00 3.53
1605 5814 3.823330 CTCGGGCGCGACTACCTT 61.823 66.667 23.01 0.00 0.00 3.50
1691 5900 1.916697 GAGCTTTCTGACAAGGGCGC 61.917 60.000 0.00 0.00 0.00 6.53
1995 6214 1.520666 CTATCTGCCCGACGGGTTT 59.479 57.895 32.76 17.52 46.51 3.27
2007 6226 0.974383 ACGGGTTTGTCGAGAGGATT 59.026 50.000 0.00 0.00 0.00 3.01
2184 6403 1.067060 CAGAGGATGAACGCGGTGATA 59.933 52.381 12.47 0.00 0.00 2.15
2423 6642 2.429250 CTGGCATGATTTCCTTGCATCA 59.571 45.455 0.00 0.00 44.88 3.07
2717 7836 7.905265 AGGATAATGATCAGGTGAGTAATCAG 58.095 38.462 0.09 0.00 33.27 2.90
2828 7953 6.976934 TTTCAATATTTTCTATGGGCCCTC 57.023 37.500 25.70 0.00 0.00 4.30
2832 7959 6.494491 TCAATATTTTCTATGGGCCCTCAATG 59.506 38.462 25.70 8.87 0.00 2.82
3017 8441 9.262358 CTTTATTGAATACTAGGTAGGAAGTGC 57.738 37.037 0.00 0.00 0.00 4.40
3018 8442 4.913335 TGAATACTAGGTAGGAAGTGCG 57.087 45.455 0.00 0.00 0.00 5.34
3019 8443 3.635373 TGAATACTAGGTAGGAAGTGCGG 59.365 47.826 0.00 0.00 0.00 5.69
3020 8444 1.396653 TACTAGGTAGGAAGTGCGGC 58.603 55.000 0.00 0.00 0.00 6.53
3021 8445 0.324460 ACTAGGTAGGAAGTGCGGCT 60.324 55.000 0.00 0.00 0.00 5.52
3022 8446 0.824759 CTAGGTAGGAAGTGCGGCTT 59.175 55.000 0.00 0.00 40.76 4.35
3023 8447 0.535335 TAGGTAGGAAGTGCGGCTTG 59.465 55.000 0.00 0.00 37.59 4.01
3024 8448 2.399356 GGTAGGAAGTGCGGCTTGC 61.399 63.158 0.00 4.58 44.59 4.01
3025 8449 2.046314 TAGGAAGTGCGGCTTGCC 60.046 61.111 0.00 0.75 45.25 4.52
3026 8450 3.950794 TAGGAAGTGCGGCTTGCCG 62.951 63.158 27.32 27.32 45.25 5.69
3057 8481 2.812499 CGCTGCCGGGTATACAGT 59.188 61.111 2.18 0.00 33.87 3.55
3058 8482 2.035421 CGCTGCCGGGTATACAGTA 58.965 57.895 2.18 0.00 33.87 2.74
3059 8483 0.386476 CGCTGCCGGGTATACAGTAA 59.614 55.000 2.18 0.00 33.87 2.24
3060 8484 1.202440 CGCTGCCGGGTATACAGTAAA 60.202 52.381 2.18 0.00 33.87 2.01
3061 8485 2.547218 CGCTGCCGGGTATACAGTAAAT 60.547 50.000 2.18 0.00 33.87 1.40
3062 8486 3.064931 GCTGCCGGGTATACAGTAAATC 58.935 50.000 2.18 0.00 33.87 2.17
3063 8487 3.493699 GCTGCCGGGTATACAGTAAATCA 60.494 47.826 2.18 0.00 33.87 2.57
3064 8488 4.802918 GCTGCCGGGTATACAGTAAATCAT 60.803 45.833 2.18 0.00 33.87 2.45
3065 8489 5.298989 TGCCGGGTATACAGTAAATCATT 57.701 39.130 2.18 0.00 0.00 2.57
3066 8490 6.422344 TGCCGGGTATACAGTAAATCATTA 57.578 37.500 2.18 0.00 0.00 1.90
3067 8491 7.011499 TGCCGGGTATACAGTAAATCATTAT 57.989 36.000 2.18 0.00 0.00 1.28
3068 8492 7.101054 TGCCGGGTATACAGTAAATCATTATC 58.899 38.462 2.18 0.00 0.00 1.75
3069 8493 7.038587 TGCCGGGTATACAGTAAATCATTATCT 60.039 37.037 2.18 0.00 0.00 1.98
3070 8494 8.472413 GCCGGGTATACAGTAAATCATTATCTA 58.528 37.037 2.18 0.00 0.00 1.98
3107 8531 9.990360 ATGAAATTTAAATTGGGTTTTAGACGT 57.010 25.926 14.04 0.00 0.00 4.34
3115 8539 8.851541 AAATTGGGTTTTAGACGTAGATAACA 57.148 30.769 0.00 0.00 0.00 2.41
3116 8540 9.457436 AAATTGGGTTTTAGACGTAGATAACAT 57.543 29.630 0.00 0.00 0.00 2.71
3120 8544 9.537192 TGGGTTTTAGACGTAGATAACATATTG 57.463 33.333 0.00 0.00 0.00 1.90
3121 8545 8.985805 GGGTTTTAGACGTAGATAACATATTGG 58.014 37.037 0.00 0.00 0.00 3.16
3122 8546 9.754382 GGTTTTAGACGTAGATAACATATTGGA 57.246 33.333 0.00 0.00 0.00 3.53
3160 8584 9.603921 AACAAAGATGATGAACAGTTCAAAAAT 57.396 25.926 19.92 13.03 43.95 1.82
3164 8588 8.922058 AGATGATGAACAGTTCAAAAATATGC 57.078 30.769 19.92 5.01 43.95 3.14
3165 8589 8.525316 AGATGATGAACAGTTCAAAAATATGCA 58.475 29.630 19.92 8.47 43.95 3.96
3166 8590 9.309516 GATGATGAACAGTTCAAAAATATGCAT 57.690 29.630 19.92 3.79 43.95 3.96
3167 8591 8.692110 TGATGAACAGTTCAAAAATATGCATC 57.308 30.769 19.92 9.24 43.95 3.91
3168 8592 7.760794 TGATGAACAGTTCAAAAATATGCATCC 59.239 33.333 19.92 0.00 43.95 3.51
3169 8593 7.230849 TGAACAGTTCAAAAATATGCATCCT 57.769 32.000 13.90 0.00 36.59 3.24
3170 8594 7.315142 TGAACAGTTCAAAAATATGCATCCTC 58.685 34.615 13.90 0.00 36.59 3.71
3171 8595 6.839124 ACAGTTCAAAAATATGCATCCTCA 57.161 33.333 0.19 0.00 0.00 3.86
3172 8596 6.860080 ACAGTTCAAAAATATGCATCCTCAG 58.140 36.000 0.19 0.00 0.00 3.35
3173 8597 6.660521 ACAGTTCAAAAATATGCATCCTCAGA 59.339 34.615 0.19 0.00 0.00 3.27
3174 8598 7.177216 ACAGTTCAAAAATATGCATCCTCAGAA 59.823 33.333 0.19 0.00 0.00 3.02
3175 8599 8.030692 CAGTTCAAAAATATGCATCCTCAGAAA 58.969 33.333 0.19 0.00 0.00 2.52
3176 8600 8.248945 AGTTCAAAAATATGCATCCTCAGAAAG 58.751 33.333 0.19 0.00 0.00 2.62
3177 8601 7.943079 TCAAAAATATGCATCCTCAGAAAGA 57.057 32.000 0.19 0.00 0.00 2.52
3178 8602 7.993101 TCAAAAATATGCATCCTCAGAAAGAG 58.007 34.615 0.19 0.00 44.31 2.85
3207 8631 6.961360 TGTTTTATAACATTGGTGGTCACA 57.039 33.333 3.40 0.00 39.29 3.58
3208 8632 7.531857 TGTTTTATAACATTGGTGGTCACAT 57.468 32.000 3.40 0.00 39.29 3.21
3209 8633 7.374272 TGTTTTATAACATTGGTGGTCACATG 58.626 34.615 3.40 0.00 39.29 3.21
3210 8634 7.231519 TGTTTTATAACATTGGTGGTCACATGA 59.768 33.333 0.00 0.00 39.29 3.07
3211 8635 7.767250 TTTATAACATTGGTGGTCACATGAA 57.233 32.000 0.00 0.00 0.00 2.57
3212 8636 7.767250 TTATAACATTGGTGGTCACATGAAA 57.233 32.000 0.00 0.00 0.00 2.69
3213 8637 6.662865 ATAACATTGGTGGTCACATGAAAA 57.337 33.333 0.00 0.00 0.00 2.29
3214 8638 5.549742 AACATTGGTGGTCACATGAAAAT 57.450 34.783 0.00 0.00 0.00 1.82
3215 8639 5.549742 ACATTGGTGGTCACATGAAAATT 57.450 34.783 0.00 0.00 0.00 1.82
3216 8640 5.927819 ACATTGGTGGTCACATGAAAATTT 58.072 33.333 0.00 0.00 0.00 1.82
3217 8641 7.060383 ACATTGGTGGTCACATGAAAATTTA 57.940 32.000 0.00 0.00 0.00 1.40
3218 8642 7.678837 ACATTGGTGGTCACATGAAAATTTAT 58.321 30.769 0.00 0.00 0.00 1.40
3219 8643 7.818930 ACATTGGTGGTCACATGAAAATTTATC 59.181 33.333 0.00 0.00 0.00 1.75
3220 8644 6.907853 TGGTGGTCACATGAAAATTTATCA 57.092 33.333 0.00 0.00 0.00 2.15
3221 8645 7.295322 TGGTGGTCACATGAAAATTTATCAA 57.705 32.000 0.00 0.00 0.00 2.57
3222 8646 7.730084 TGGTGGTCACATGAAAATTTATCAAA 58.270 30.769 0.00 0.00 0.00 2.69
3223 8647 8.206867 TGGTGGTCACATGAAAATTTATCAAAA 58.793 29.630 0.00 0.00 0.00 2.44
3224 8648 9.050601 GGTGGTCACATGAAAATTTATCAAAAA 57.949 29.630 0.00 0.00 0.00 1.94
3248 8672 9.525409 AAAATAAGCAGAAATGATACATTGAGC 57.475 29.630 0.00 0.00 0.00 4.26
3249 8673 8.461249 AATAAGCAGAAATGATACATTGAGCT 57.539 30.769 0.00 0.00 0.00 4.09
3250 8674 6.770746 AAGCAGAAATGATACATTGAGCTT 57.229 33.333 17.12 17.12 34.16 3.74
3251 8675 7.870509 AAGCAGAAATGATACATTGAGCTTA 57.129 32.000 19.32 0.00 36.90 3.09
3252 8676 8.461249 AAGCAGAAATGATACATTGAGCTTAT 57.539 30.769 19.32 6.83 36.90 1.73
3253 8677 9.565090 AAGCAGAAATGATACATTGAGCTTATA 57.435 29.630 19.32 0.00 36.90 0.98
3254 8678 9.736414 AGCAGAAATGATACATTGAGCTTATAT 57.264 29.630 0.00 0.00 0.00 0.86
3272 8696 7.054855 CTTATATAAGCATTCGAAGACAGGC 57.945 40.000 9.51 2.36 34.32 4.85
3273 8697 3.550437 ATAAGCATTCGAAGACAGGCT 57.450 42.857 3.35 4.72 36.58 4.58
3274 8698 4.672587 ATAAGCATTCGAAGACAGGCTA 57.327 40.909 3.35 0.00 34.75 3.93
3275 8699 3.550437 AAGCATTCGAAGACAGGCTAT 57.450 42.857 3.35 0.00 34.75 2.97
3276 8700 2.831333 AGCATTCGAAGACAGGCTATG 58.169 47.619 3.35 0.00 34.28 2.23
3277 8701 1.262683 GCATTCGAAGACAGGCTATGC 59.737 52.381 3.35 1.13 34.32 3.14
3278 8702 2.554142 CATTCGAAGACAGGCTATGCA 58.446 47.619 3.35 0.00 34.32 3.96
3279 8703 2.299993 TTCGAAGACAGGCTATGCAG 57.700 50.000 0.00 0.00 34.32 4.41
3280 8704 1.474330 TCGAAGACAGGCTATGCAGA 58.526 50.000 0.00 0.00 0.00 4.26
3281 8705 1.135139 TCGAAGACAGGCTATGCAGAC 59.865 52.381 0.00 0.00 0.00 3.51
3282 8706 1.134995 CGAAGACAGGCTATGCAGACA 60.135 52.381 0.00 0.00 28.86 3.41
3283 8707 2.482664 CGAAGACAGGCTATGCAGACAT 60.483 50.000 0.00 0.00 40.49 3.06
3284 8708 3.243535 CGAAGACAGGCTATGCAGACATA 60.244 47.826 0.00 0.00 37.74 2.29
3285 8709 4.697514 GAAGACAGGCTATGCAGACATAA 58.302 43.478 0.00 0.00 38.29 1.90
3286 8710 4.065321 AGACAGGCTATGCAGACATAAC 57.935 45.455 0.00 0.00 38.29 1.89
3287 8711 3.708631 AGACAGGCTATGCAGACATAACT 59.291 43.478 0.00 0.00 38.29 2.24
3288 8712 4.054671 GACAGGCTATGCAGACATAACTC 58.945 47.826 0.00 0.00 38.29 3.01
3289 8713 3.452264 ACAGGCTATGCAGACATAACTCA 59.548 43.478 0.00 0.00 38.29 3.41
3290 8714 4.080919 ACAGGCTATGCAGACATAACTCAA 60.081 41.667 0.00 0.00 38.29 3.02
3291 8715 4.272018 CAGGCTATGCAGACATAACTCAAC 59.728 45.833 0.00 0.00 38.29 3.18
3292 8716 4.080919 AGGCTATGCAGACATAACTCAACA 60.081 41.667 0.00 0.00 38.29 3.33
3293 8717 4.818546 GGCTATGCAGACATAACTCAACAT 59.181 41.667 0.00 0.00 38.29 2.71
3294 8718 5.277683 GGCTATGCAGACATAACTCAACATG 60.278 44.000 0.00 0.00 38.29 3.21
3295 8719 5.525012 GCTATGCAGACATAACTCAACATGA 59.475 40.000 0.00 0.00 38.29 3.07
3296 8720 6.204301 GCTATGCAGACATAACTCAACATGAT 59.796 38.462 0.00 0.00 38.29 2.45
3297 8721 6.615264 ATGCAGACATAACTCAACATGATC 57.385 37.500 0.00 0.00 33.67 2.92
3298 8722 4.567959 TGCAGACATAACTCAACATGATCG 59.432 41.667 0.00 0.00 0.00 3.69
3299 8723 4.805719 GCAGACATAACTCAACATGATCGA 59.194 41.667 0.00 0.00 0.00 3.59
3300 8724 5.464722 GCAGACATAACTCAACATGATCGAT 59.535 40.000 0.00 0.00 0.00 3.59
3301 8725 6.642540 GCAGACATAACTCAACATGATCGATA 59.357 38.462 0.00 0.00 0.00 2.92
3302 8726 7.330454 GCAGACATAACTCAACATGATCGATAT 59.670 37.037 0.00 0.00 0.00 1.63
3303 8727 9.846248 CAGACATAACTCAACATGATCGATATA 57.154 33.333 0.00 0.00 0.00 0.86
3311 8735 9.561270 ACTCAACATGATCGATATAATAGTTCG 57.439 33.333 0.00 0.00 0.00 3.95
3312 8736 9.561270 CTCAACATGATCGATATAATAGTTCGT 57.439 33.333 0.00 0.00 34.60 3.85
3322 8746 9.445878 TCGATATAATAGTTCGTAGATTCAGGT 57.554 33.333 0.00 0.00 35.04 4.00
3329 8753 5.963594 AGTTCGTAGATTCAGGTAAAGACC 58.036 41.667 0.00 0.00 41.29 3.85
3330 8754 4.797349 GTTCGTAGATTCAGGTAAAGACCG 59.203 45.833 0.00 0.00 44.59 4.79
3331 8755 4.142315 TTCGTAGATTCAGGTAAAGACCGG 60.142 45.833 0.00 0.00 44.59 5.28
3332 8756 6.325387 TTCGTAGATTCAGGTAAAGACCGGA 61.325 44.000 9.46 0.00 46.80 5.14
3342 8766 4.124970 GGTAAAGACCGGATATGTTGTCC 58.875 47.826 9.46 0.00 35.52 4.02
3343 8767 4.141779 GGTAAAGACCGGATATGTTGTCCT 60.142 45.833 9.46 0.00 35.52 3.85
3344 8768 4.569719 AAAGACCGGATATGTTGTCCTT 57.430 40.909 9.46 0.00 33.46 3.36
3345 8769 5.687166 AAAGACCGGATATGTTGTCCTTA 57.313 39.130 9.46 0.00 33.46 2.69
3346 8770 5.888982 AAGACCGGATATGTTGTCCTTAT 57.111 39.130 9.46 0.00 33.46 1.73
3347 8771 6.989155 AAGACCGGATATGTTGTCCTTATA 57.011 37.500 9.46 0.00 33.46 0.98
3348 8772 6.591750 AGACCGGATATGTTGTCCTTATAG 57.408 41.667 9.46 0.00 33.46 1.31
3349 8773 6.312529 AGACCGGATATGTTGTCCTTATAGA 58.687 40.000 9.46 0.00 33.46 1.98
3350 8774 6.208994 AGACCGGATATGTTGTCCTTATAGAC 59.791 42.308 9.46 0.00 37.28 2.59
3351 8775 5.836898 ACCGGATATGTTGTCCTTATAGACA 59.163 40.000 9.46 0.00 44.89 3.41
3352 8776 6.157211 CCGGATATGTTGTCCTTATAGACAC 58.843 44.000 0.00 0.00 46.18 3.67
3353 8777 6.157211 CGGATATGTTGTCCTTATAGACACC 58.843 44.000 0.00 0.00 46.18 4.16
3354 8778 6.239204 CGGATATGTTGTCCTTATAGACACCA 60.239 42.308 0.00 0.00 46.18 4.17
3355 8779 6.929606 GGATATGTTGTCCTTATAGACACCAC 59.070 42.308 0.00 0.00 46.18 4.16
3356 8780 4.546829 TGTTGTCCTTATAGACACCACC 57.453 45.455 0.00 0.00 46.18 4.61
3357 8781 3.904965 TGTTGTCCTTATAGACACCACCA 59.095 43.478 0.00 0.00 46.18 4.17
3358 8782 4.020573 TGTTGTCCTTATAGACACCACCAG 60.021 45.833 0.00 0.00 46.18 4.00
3359 8783 3.786553 TGTCCTTATAGACACCACCAGT 58.213 45.455 0.00 0.00 41.78 4.00
3360 8784 4.938028 TGTCCTTATAGACACCACCAGTA 58.062 43.478 0.00 0.00 41.78 2.74
3361 8785 5.335261 TGTCCTTATAGACACCACCAGTAA 58.665 41.667 0.00 0.00 41.78 2.24
3362 8786 5.781306 TGTCCTTATAGACACCACCAGTAAA 59.219 40.000 0.00 0.00 41.78 2.01
3363 8787 6.442564 TGTCCTTATAGACACCACCAGTAAAT 59.557 38.462 0.00 0.00 41.78 1.40
3364 8788 7.620491 TGTCCTTATAGACACCACCAGTAAATA 59.380 37.037 0.00 0.00 41.78 1.40
3365 8789 7.924947 GTCCTTATAGACACCACCAGTAAATAC 59.075 40.741 0.00 0.00 36.73 1.89
3366 8790 7.620491 TCCTTATAGACACCACCAGTAAATACA 59.380 37.037 0.00 0.00 0.00 2.29
3367 8791 8.429641 CCTTATAGACACCACCAGTAAATACAT 58.570 37.037 0.00 0.00 0.00 2.29
3373 8797 9.998106 AGACACCACCAGTAAATACATATATTC 57.002 33.333 0.00 0.00 30.27 1.75
3374 8798 9.772973 GACACCACCAGTAAATACATATATTCA 57.227 33.333 0.00 0.00 30.27 2.57
3375 8799 9.778741 ACACCACCAGTAAATACATATATTCAG 57.221 33.333 0.00 0.00 30.27 3.02
3376 8800 9.219603 CACCACCAGTAAATACATATATTCAGG 57.780 37.037 0.00 0.00 30.27 3.86
3377 8801 8.945193 ACCACCAGTAAATACATATATTCAGGT 58.055 33.333 0.00 0.00 30.27 4.00
3378 8802 9.793259 CCACCAGTAAATACATATATTCAGGTT 57.207 33.333 0.00 0.00 30.27 3.50
3390 8814 9.658799 ACATATATTCAGGTTGTATGTAGCATC 57.341 33.333 0.00 0.00 35.03 3.91
3391 8815 9.881649 CATATATTCAGGTTGTATGTAGCATCT 57.118 33.333 0.00 0.00 0.00 2.90
3393 8817 5.939764 TTCAGGTTGTATGTAGCATCTCT 57.060 39.130 0.00 0.00 0.00 3.10
3394 8818 7.603180 ATTCAGGTTGTATGTAGCATCTCTA 57.397 36.000 0.00 0.00 0.00 2.43
3395 8819 7.603180 TTCAGGTTGTATGTAGCATCTCTAT 57.397 36.000 0.00 0.00 0.00 1.98
3396 8820 7.603180 TCAGGTTGTATGTAGCATCTCTATT 57.397 36.000 0.00 0.00 0.00 1.73
3397 8821 8.706322 TCAGGTTGTATGTAGCATCTCTATTA 57.294 34.615 0.00 0.00 0.00 0.98
3398 8822 9.314133 TCAGGTTGTATGTAGCATCTCTATTAT 57.686 33.333 0.00 0.00 0.00 1.28
3399 8823 9.935241 CAGGTTGTATGTAGCATCTCTATTATT 57.065 33.333 0.00 0.00 0.00 1.40
3412 8836 9.159470 GCATCTCTATTATTCTTTTACGTTTGC 57.841 33.333 0.00 0.00 0.00 3.68
3420 8844 6.822073 ATTCTTTTACGTTTGCTTTGTTCC 57.178 33.333 0.00 0.00 0.00 3.62
3421 8845 4.674475 TCTTTTACGTTTGCTTTGTTCCC 58.326 39.130 0.00 0.00 0.00 3.97
3422 8846 3.439895 TTTACGTTTGCTTTGTTCCCC 57.560 42.857 0.00 0.00 0.00 4.81
3423 8847 1.320507 TACGTTTGCTTTGTTCCCCC 58.679 50.000 0.00 0.00 0.00 5.40
3424 8848 0.396556 ACGTTTGCTTTGTTCCCCCT 60.397 50.000 0.00 0.00 0.00 4.79
3425 8849 0.031994 CGTTTGCTTTGTTCCCCCTG 59.968 55.000 0.00 0.00 0.00 4.45
3426 8850 1.119684 GTTTGCTTTGTTCCCCCTGT 58.880 50.000 0.00 0.00 0.00 4.00
3427 8851 1.484653 GTTTGCTTTGTTCCCCCTGTT 59.515 47.619 0.00 0.00 0.00 3.16
3428 8852 1.872773 TTGCTTTGTTCCCCCTGTTT 58.127 45.000 0.00 0.00 0.00 2.83
3429 8853 1.872773 TGCTTTGTTCCCCCTGTTTT 58.127 45.000 0.00 0.00 0.00 2.43
3430 8854 3.033659 TGCTTTGTTCCCCCTGTTTTA 57.966 42.857 0.00 0.00 0.00 1.52
3431 8855 3.375699 TGCTTTGTTCCCCCTGTTTTAA 58.624 40.909 0.00 0.00 0.00 1.52
3432 8856 3.970640 TGCTTTGTTCCCCCTGTTTTAAT 59.029 39.130 0.00 0.00 0.00 1.40
3433 8857 4.039852 TGCTTTGTTCCCCCTGTTTTAATC 59.960 41.667 0.00 0.00 0.00 1.75
3434 8858 4.039852 GCTTTGTTCCCCCTGTTTTAATCA 59.960 41.667 0.00 0.00 0.00 2.57
3435 8859 5.279960 GCTTTGTTCCCCCTGTTTTAATCAT 60.280 40.000 0.00 0.00 0.00 2.45
3436 8860 6.071051 GCTTTGTTCCCCCTGTTTTAATCATA 60.071 38.462 0.00 0.00 0.00 2.15
3437 8861 7.526359 GCTTTGTTCCCCCTGTTTTAATCATAA 60.526 37.037 0.00 0.00 0.00 1.90
3438 8862 7.857404 TTGTTCCCCCTGTTTTAATCATAAA 57.143 32.000 0.00 0.00 0.00 1.40
3439 8863 8.442660 TTGTTCCCCCTGTTTTAATCATAAAT 57.557 30.769 0.00 0.00 31.33 1.40
3440 8864 9.548631 TTGTTCCCCCTGTTTTAATCATAAATA 57.451 29.630 0.00 0.00 31.33 1.40
3441 8865 9.196139 TGTTCCCCCTGTTTTAATCATAAATAG 57.804 33.333 0.00 0.00 31.33 1.73
3442 8866 8.638873 GTTCCCCCTGTTTTAATCATAAATAGG 58.361 37.037 0.00 0.00 36.47 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 62 8.700973 TCATTAAACCCCAGCCTTAATTAATTC 58.299 33.333 3.39 0.00 0.00 2.17
130 132 1.293062 ACACCTAGACCGAGGGAGTA 58.707 55.000 0.00 0.00 41.36 2.59
132 134 2.660670 ATACACCTAGACCGAGGGAG 57.339 55.000 0.00 0.00 41.36 4.30
133 135 3.396946 ACATATACACCTAGACCGAGGGA 59.603 47.826 0.00 0.00 41.36 4.20
134 136 3.757493 GACATATACACCTAGACCGAGGG 59.243 52.174 0.00 0.00 41.36 4.30
135 137 4.215827 GTGACATATACACCTAGACCGAGG 59.784 50.000 0.00 0.00 42.89 4.63
136 138 5.359716 GTGACATATACACCTAGACCGAG 57.640 47.826 0.00 0.00 32.84 4.63
146 148 8.415192 TGATTTTCGTAAGGTGACATATACAC 57.585 34.615 0.00 0.00 37.51 2.90
153 155 9.226606 AGATTATTTGATTTTCGTAAGGTGACA 57.773 29.630 0.00 0.00 38.47 3.58
162 164 9.965824 AGTGTTTTGAGATTATTTGATTTTCGT 57.034 25.926 0.00 0.00 0.00 3.85
167 169 9.860898 GCCTAAGTGTTTTGAGATTATTTGATT 57.139 29.630 0.00 0.00 0.00 2.57
170 172 6.251376 GCGCCTAAGTGTTTTGAGATTATTTG 59.749 38.462 0.00 0.00 0.00 2.32
172 174 5.447279 CGCGCCTAAGTGTTTTGAGATTATT 60.447 40.000 0.00 0.00 0.00 1.40
173 175 4.034048 CGCGCCTAAGTGTTTTGAGATTAT 59.966 41.667 0.00 0.00 0.00 1.28
174 176 3.369756 CGCGCCTAAGTGTTTTGAGATTA 59.630 43.478 0.00 0.00 0.00 1.75
177 179 1.144969 CGCGCCTAAGTGTTTTGAGA 58.855 50.000 0.00 0.00 0.00 3.27
178 180 0.165944 CCGCGCCTAAGTGTTTTGAG 59.834 55.000 0.00 0.00 0.00 3.02
179 181 0.533308 ACCGCGCCTAAGTGTTTTGA 60.533 50.000 0.00 0.00 0.00 2.69
180 182 0.385473 CACCGCGCCTAAGTGTTTTG 60.385 55.000 0.00 0.00 0.00 2.44
181 183 1.946267 CACCGCGCCTAAGTGTTTT 59.054 52.632 0.00 0.00 0.00 2.43
182 184 2.613506 GCACCGCGCCTAAGTGTTT 61.614 57.895 12.83 0.00 33.96 2.83
183 185 3.047877 GCACCGCGCCTAAGTGTT 61.048 61.111 12.83 0.00 33.96 3.32
185 187 1.087202 TAATGCACCGCGCCTAAGTG 61.087 55.000 0.00 4.02 41.33 3.16
186 188 0.391927 TTAATGCACCGCGCCTAAGT 60.392 50.000 0.00 0.00 41.33 2.24
187 189 0.027586 GTTAATGCACCGCGCCTAAG 59.972 55.000 0.00 0.00 41.33 2.18
188 190 0.391927 AGTTAATGCACCGCGCCTAA 60.392 50.000 0.00 0.00 41.33 2.69
189 191 0.460722 TAGTTAATGCACCGCGCCTA 59.539 50.000 0.00 0.00 41.33 3.93
191 193 0.661020 AATAGTTAATGCACCGCGCC 59.339 50.000 0.00 0.00 41.33 6.53
193 195 4.201494 CGAGATAATAGTTAATGCACCGCG 60.201 45.833 0.00 0.00 0.00 6.46
194 196 4.684703 ACGAGATAATAGTTAATGCACCGC 59.315 41.667 0.00 0.00 0.00 5.68
195 197 6.764877 AACGAGATAATAGTTAATGCACCG 57.235 37.500 0.00 0.00 0.00 4.94
196 198 8.366671 AGAAACGAGATAATAGTTAATGCACC 57.633 34.615 0.00 0.00 0.00 5.01
215 217 9.968743 GGTTGATATGTTAAGAAACTAGAAACG 57.031 33.333 0.00 0.00 36.51 3.60
225 227 9.905713 AGCTCTTATTGGTTGATATGTTAAGAA 57.094 29.630 0.00 0.00 0.00 2.52
227 229 9.113838 ACAGCTCTTATTGGTTGATATGTTAAG 57.886 33.333 0.00 0.00 0.00 1.85
228 230 8.892723 CACAGCTCTTATTGGTTGATATGTTAA 58.107 33.333 0.00 0.00 0.00 2.01
229 231 7.498900 CCACAGCTCTTATTGGTTGATATGTTA 59.501 37.037 0.00 0.00 0.00 2.41
230 232 6.319658 CCACAGCTCTTATTGGTTGATATGTT 59.680 38.462 0.00 0.00 0.00 2.71
231 233 5.824624 CCACAGCTCTTATTGGTTGATATGT 59.175 40.000 0.00 0.00 0.00 2.29
232 234 5.240183 CCCACAGCTCTTATTGGTTGATATG 59.760 44.000 0.00 0.00 0.00 1.78
233 235 5.380043 CCCACAGCTCTTATTGGTTGATAT 58.620 41.667 0.00 0.00 0.00 1.63
237 239 1.474077 GCCCACAGCTCTTATTGGTTG 59.526 52.381 0.00 0.00 38.99 3.77
238 240 1.839424 GCCCACAGCTCTTATTGGTT 58.161 50.000 0.00 0.00 38.99 3.67
239 241 0.392998 CGCCCACAGCTCTTATTGGT 60.393 55.000 0.00 0.00 40.39 3.67
240 242 0.392998 ACGCCCACAGCTCTTATTGG 60.393 55.000 0.00 0.00 40.39 3.16
241 243 1.933853 GTACGCCCACAGCTCTTATTG 59.066 52.381 0.00 0.00 40.39 1.90
242 244 1.553248 TGTACGCCCACAGCTCTTATT 59.447 47.619 0.00 0.00 40.39 1.40
243 245 1.191535 TGTACGCCCACAGCTCTTAT 58.808 50.000 0.00 0.00 40.39 1.73
244 246 1.134818 CATGTACGCCCACAGCTCTTA 60.135 52.381 0.00 0.00 40.39 2.10
245 247 0.391661 CATGTACGCCCACAGCTCTT 60.392 55.000 0.00 0.00 40.39 2.85
246 248 1.219124 CATGTACGCCCACAGCTCT 59.781 57.895 0.00 0.00 40.39 4.09
247 249 2.464459 GCATGTACGCCCACAGCTC 61.464 63.158 0.00 0.00 40.39 4.09
249 251 1.586154 AAAGCATGTACGCCCACAGC 61.586 55.000 0.00 0.00 38.52 4.40
250 252 0.447801 GAAAGCATGTACGCCCACAG 59.552 55.000 0.00 0.00 0.00 3.66
252 254 0.447801 CTGAAAGCATGTACGCCCAC 59.552 55.000 0.00 0.00 0.00 4.61
254 256 0.447801 CACTGAAAGCATGTACGCCC 59.552 55.000 0.00 0.00 37.60 6.13
255 257 1.128692 GTCACTGAAAGCATGTACGCC 59.871 52.381 0.00 0.00 37.60 5.68
256 258 2.069273 AGTCACTGAAAGCATGTACGC 58.931 47.619 0.00 0.00 37.60 4.42
257 259 3.740832 TCAAGTCACTGAAAGCATGTACG 59.259 43.478 0.00 0.00 37.60 3.67
258 260 4.991056 TCTCAAGTCACTGAAAGCATGTAC 59.009 41.667 0.00 0.00 37.60 2.90
261 263 4.063689 AGTCTCAAGTCACTGAAAGCATG 58.936 43.478 0.00 0.00 37.60 4.06
262 264 4.348863 AGTCTCAAGTCACTGAAAGCAT 57.651 40.909 0.00 0.00 37.60 3.79
264 266 3.991121 GGTAGTCTCAAGTCACTGAAAGC 59.009 47.826 0.00 0.00 37.60 3.51
267 269 5.105106 TGTTTGGTAGTCTCAAGTCACTGAA 60.105 40.000 0.00 0.00 0.00 3.02
269 271 4.508124 GTGTTTGGTAGTCTCAAGTCACTG 59.492 45.833 0.00 0.00 33.09 3.66
270 272 4.694339 GTGTTTGGTAGTCTCAAGTCACT 58.306 43.478 0.00 0.00 33.09 3.41
271 273 3.489785 CGTGTTTGGTAGTCTCAAGTCAC 59.510 47.826 0.00 0.00 32.82 3.67
272 274 3.382227 TCGTGTTTGGTAGTCTCAAGTCA 59.618 43.478 0.00 0.00 0.00 3.41
273 275 3.734735 GTCGTGTTTGGTAGTCTCAAGTC 59.265 47.826 0.00 0.00 0.00 3.01
274 276 3.131577 TGTCGTGTTTGGTAGTCTCAAGT 59.868 43.478 0.00 0.00 0.00 3.16
275 277 3.713288 TGTCGTGTTTGGTAGTCTCAAG 58.287 45.455 0.00 0.00 0.00 3.02
277 279 3.649073 CATGTCGTGTTTGGTAGTCTCA 58.351 45.455 0.00 0.00 0.00 3.27
278 280 2.412089 GCATGTCGTGTTTGGTAGTCTC 59.588 50.000 0.00 0.00 0.00 3.36
279 281 2.224185 TGCATGTCGTGTTTGGTAGTCT 60.224 45.455 0.00 0.00 0.00 3.24
280 282 2.139917 TGCATGTCGTGTTTGGTAGTC 58.860 47.619 0.00 0.00 0.00 2.59
282 284 3.829886 ATTGCATGTCGTGTTTGGTAG 57.170 42.857 0.00 0.00 0.00 3.18
283 285 3.316588 ACAATTGCATGTCGTGTTTGGTA 59.683 39.130 5.05 0.00 0.00 3.25
284 286 2.100584 ACAATTGCATGTCGTGTTTGGT 59.899 40.909 5.05 0.00 0.00 3.67
286 288 4.975502 ACTAACAATTGCATGTCGTGTTTG 59.024 37.500 5.05 10.50 34.43 2.93
287 289 5.181690 ACTAACAATTGCATGTCGTGTTT 57.818 34.783 5.05 0.00 34.43 2.83
288 290 4.829064 ACTAACAATTGCATGTCGTGTT 57.171 36.364 5.05 9.88 36.45 3.32
292 294 4.725280 CGATGAACTAACAATTGCATGTCG 59.275 41.667 5.05 1.82 31.81 4.35
293 295 4.496895 GCGATGAACTAACAATTGCATGTC 59.503 41.667 5.05 0.00 31.81 3.06
294 296 4.082841 TGCGATGAACTAACAATTGCATGT 60.083 37.500 5.05 0.00 34.24 3.21
295 297 4.413969 TGCGATGAACTAACAATTGCATG 58.586 39.130 5.05 0.00 0.00 4.06
297 299 3.119884 CCTGCGATGAACTAACAATTGCA 60.120 43.478 5.05 0.00 0.00 4.08
298 300 3.429085 CCTGCGATGAACTAACAATTGC 58.571 45.455 5.05 0.00 0.00 3.56
299 301 3.119884 TGCCTGCGATGAACTAACAATTG 60.120 43.478 3.24 3.24 0.00 2.32
300 302 3.081061 TGCCTGCGATGAACTAACAATT 58.919 40.909 0.00 0.00 0.00 2.32
301 303 2.710377 TGCCTGCGATGAACTAACAAT 58.290 42.857 0.00 0.00 0.00 2.71
302 304 2.177394 TGCCTGCGATGAACTAACAA 57.823 45.000 0.00 0.00 0.00 2.83
303 305 2.177394 TTGCCTGCGATGAACTAACA 57.823 45.000 0.00 0.00 0.00 2.41
304 306 2.420022 ACATTGCCTGCGATGAACTAAC 59.580 45.455 22.88 0.00 39.55 2.34
305 307 2.710377 ACATTGCCTGCGATGAACTAA 58.290 42.857 22.88 0.00 39.55 2.24
306 308 2.401583 ACATTGCCTGCGATGAACTA 57.598 45.000 22.88 0.00 39.55 2.24
307 309 1.538047 AACATTGCCTGCGATGAACT 58.462 45.000 22.88 6.88 39.55 3.01
308 310 3.698029 ATAACATTGCCTGCGATGAAC 57.302 42.857 22.88 0.00 39.55 3.18
309 311 5.826601 TTAATAACATTGCCTGCGATGAA 57.173 34.783 22.88 12.29 39.55 2.57
310 312 6.389830 AATTAATAACATTGCCTGCGATGA 57.610 33.333 22.88 5.01 39.55 2.92
311 313 6.306356 GCTAATTAATAACATTGCCTGCGATG 59.694 38.462 16.10 16.10 42.12 3.84
313 315 5.298026 TGCTAATTAATAACATTGCCTGCGA 59.702 36.000 0.00 0.00 0.00 5.10
314 316 5.518812 TGCTAATTAATAACATTGCCTGCG 58.481 37.500 0.00 0.00 0.00 5.18
315 317 7.769272 TTTGCTAATTAATAACATTGCCTGC 57.231 32.000 0.00 0.00 0.00 4.85
333 335 9.431887 ACGAGAGAACTTAATGTTTATTTGCTA 57.568 29.630 0.00 0.00 39.30 3.49
334 336 8.324163 ACGAGAGAACTTAATGTTTATTTGCT 57.676 30.769 0.00 0.00 39.30 3.91
361 363 0.951558 GCGACCAAGGCTGAGAAAAA 59.048 50.000 0.00 0.00 0.00 1.94
362 364 1.227999 CGCGACCAAGGCTGAGAAAA 61.228 55.000 0.00 0.00 0.00 2.29
363 365 1.667830 CGCGACCAAGGCTGAGAAA 60.668 57.895 0.00 0.00 0.00 2.52
365 367 2.351244 ATCGCGACCAAGGCTGAGA 61.351 57.895 12.93 0.00 0.00 3.27
366 368 2.169789 CATCGCGACCAAGGCTGAG 61.170 63.158 12.93 0.00 0.00 3.35
367 369 2.125552 CATCGCGACCAAGGCTGA 60.126 61.111 12.93 0.00 0.00 4.26
370 372 4.166011 GTGCATCGCGACCAAGGC 62.166 66.667 12.93 11.27 0.00 4.35
371 373 2.324330 TTGTGCATCGCGACCAAGG 61.324 57.895 12.93 0.00 0.00 3.61
372 374 1.154413 GTTGTGCATCGCGACCAAG 60.154 57.895 12.93 2.71 0.00 3.61
373 375 2.612567 GGTTGTGCATCGCGACCAA 61.613 57.895 12.93 9.64 45.11 3.67
375 377 1.017177 TTAGGTTGTGCATCGCGACC 61.017 55.000 12.93 6.91 45.87 4.79
376 378 0.370273 CTTAGGTTGTGCATCGCGAC 59.630 55.000 12.93 0.00 0.00 5.19
377 379 0.245266 TCTTAGGTTGTGCATCGCGA 59.755 50.000 13.09 13.09 0.00 5.87
379 381 2.030946 GTCATCTTAGGTTGTGCATCGC 59.969 50.000 0.00 0.00 0.00 4.58
380 382 3.525537 AGTCATCTTAGGTTGTGCATCG 58.474 45.455 0.00 0.00 0.00 3.84
381 383 7.710907 TGTATAAGTCATCTTAGGTTGTGCATC 59.289 37.037 0.00 0.00 39.17 3.91
382 384 7.495934 GTGTATAAGTCATCTTAGGTTGTGCAT 59.504 37.037 0.00 0.00 39.17 3.96
384 386 6.258068 GGTGTATAAGTCATCTTAGGTTGTGC 59.742 42.308 0.00 0.00 39.17 4.57
385 387 7.556844 AGGTGTATAAGTCATCTTAGGTTGTG 58.443 38.462 0.00 0.00 39.17 3.33
386 388 7.735326 AGGTGTATAAGTCATCTTAGGTTGT 57.265 36.000 0.00 0.00 39.17 3.32
390 392 7.094720 CCGTCTAGGTGTATAAGTCATCTTAGG 60.095 44.444 0.00 0.00 36.10 2.69
391 393 7.660617 TCCGTCTAGGTGTATAAGTCATCTTAG 59.339 40.741 0.00 0.00 39.07 2.18
394 396 5.938279 TCCGTCTAGGTGTATAAGTCATCT 58.062 41.667 0.00 0.00 41.99 2.90
395 397 5.181622 CCTCCGTCTAGGTGTATAAGTCATC 59.818 48.000 0.00 0.00 41.99 2.92
397 399 4.164796 TCCTCCGTCTAGGTGTATAAGTCA 59.835 45.833 0.00 0.00 41.99 3.41
399 401 4.785346 TCCTCCGTCTAGGTGTATAAGT 57.215 45.455 0.00 0.00 41.99 2.24
400 402 5.131784 ACTTCCTCCGTCTAGGTGTATAAG 58.868 45.833 0.00 0.00 41.99 1.73
402 404 4.785346 ACTTCCTCCGTCTAGGTGTATA 57.215 45.455 0.00 0.00 41.99 1.47
403 405 3.666345 ACTTCCTCCGTCTAGGTGTAT 57.334 47.619 0.00 0.00 41.99 2.29
405 407 2.308275 ACTACTTCCTCCGTCTAGGTGT 59.692 50.000 0.00 0.00 41.99 4.16
408 410 4.128643 CAGTACTACTTCCTCCGTCTAGG 58.871 52.174 0.00 0.00 42.97 3.02
412 414 2.159407 GCACAGTACTACTTCCTCCGTC 60.159 54.545 0.00 0.00 0.00 4.79
413 415 1.817447 GCACAGTACTACTTCCTCCGT 59.183 52.381 0.00 0.00 0.00 4.69
415 417 2.166664 CCAGCACAGTACTACTTCCTCC 59.833 54.545 0.00 0.00 0.00 4.30
416 418 3.090037 TCCAGCACAGTACTACTTCCTC 58.910 50.000 0.00 0.00 0.00 3.71
417 419 3.170991 TCCAGCACAGTACTACTTCCT 57.829 47.619 0.00 0.00 0.00 3.36
418 420 3.955650 TTCCAGCACAGTACTACTTCC 57.044 47.619 0.00 0.00 0.00 3.46
419 421 6.631962 AGTATTTCCAGCACAGTACTACTTC 58.368 40.000 0.00 0.00 0.00 3.01
420 422 6.210784 TGAGTATTTCCAGCACAGTACTACTT 59.789 38.462 0.00 0.00 0.00 2.24
505 507 5.803967 AGATAACAACGACGATTACTGTTCC 59.196 40.000 0.00 0.36 32.69 3.62
661 3465 1.863267 CGGAGATGCAGTGGAAGATC 58.137 55.000 0.00 0.00 0.00 2.75
665 3469 1.219124 GAGCGGAGATGCAGTGGAA 59.781 57.895 0.00 0.00 37.31 3.53
669 3473 1.418334 AATAGGAGCGGAGATGCAGT 58.582 50.000 0.00 0.00 36.04 4.40
686 3490 5.305386 TCCCATCGTTGAGATCTGTCATAAT 59.695 40.000 0.00 0.00 37.52 1.28
687 3491 4.649218 TCCCATCGTTGAGATCTGTCATAA 59.351 41.667 0.00 0.00 37.52 1.90
688 3492 4.215109 TCCCATCGTTGAGATCTGTCATA 58.785 43.478 0.00 0.00 37.52 2.15
689 3493 3.033909 TCCCATCGTTGAGATCTGTCAT 58.966 45.455 0.00 0.00 37.52 3.06
690 3494 2.456577 TCCCATCGTTGAGATCTGTCA 58.543 47.619 0.00 0.00 37.52 3.58
691 3495 3.742433 ATCCCATCGTTGAGATCTGTC 57.258 47.619 0.00 0.00 37.52 3.51
739 4363 3.388308 CCAGCATCTAGAAACCTCATCG 58.612 50.000 0.00 0.00 0.00 3.84
830 5022 2.156098 GTTTCCAATCTGGCGGTTGTA 58.844 47.619 0.00 0.00 37.47 2.41
898 5098 8.886719 ACGTACGCATATATACTGCTTATAAGA 58.113 33.333 16.72 1.02 37.48 2.10
1114 5322 0.108138 GACAGGCTGGCGTAAGTGAT 60.108 55.000 20.34 0.00 41.68 3.06
1227 5435 2.661537 CGAGTCACCAAGTGCGCA 60.662 61.111 5.66 5.66 32.98 6.09
1266 5474 2.358615 CGTAGCTGTGGCAAGGCA 60.359 61.111 13.90 0.00 41.70 4.75
1317 5525 0.178767 TGATGAAGGCAGTGATCCCG 59.821 55.000 0.00 0.00 0.00 5.14
1335 5543 2.821366 GGGCAGAGCATGTCGGTG 60.821 66.667 0.00 0.00 32.79 4.94
1399 5607 2.834549 ACATGAGGTTGGAGGTGTAGAG 59.165 50.000 0.00 0.00 0.00 2.43
1412 5620 1.476891 ACGATAACAGCGACATGAGGT 59.523 47.619 0.00 0.00 0.00 3.85
1605 5814 1.141881 GATGAAGCCTTCCGCGAGA 59.858 57.895 8.23 0.00 44.76 4.04
1738 5947 4.176851 GACCTCGTCGGAGTCGGC 62.177 72.222 0.00 0.00 39.90 5.54
1995 6214 3.346315 TGTACCGTTAATCCTCTCGACA 58.654 45.455 0.00 0.00 0.00 4.35
2007 6226 0.899720 CAAGGAGCCCTGTACCGTTA 59.100 55.000 0.00 0.00 32.13 3.18
2184 6403 2.360852 ACCCGATCCGACGACAGT 60.361 61.111 0.00 0.00 35.09 3.55
2275 6494 3.198635 CCTTCCATAAGCTCTCTGACCAA 59.801 47.826 0.00 0.00 0.00 3.67
2349 6568 2.819595 GGCGCCGAAGCAATCTCA 60.820 61.111 12.58 0.00 39.83 3.27
2423 6642 1.629043 TTACTCACCGTGGCTCTTCT 58.371 50.000 0.00 0.00 0.00 2.85
2717 7836 6.383415 TCCGTTCAAATTGTTGGCTTATAAC 58.617 36.000 0.00 0.00 35.29 1.89
2828 7953 6.361214 GCATTTTGGTTTTGCTGATTTCATTG 59.639 34.615 0.00 0.00 33.61 2.82
2832 7959 5.236911 TCTGCATTTTGGTTTTGCTGATTTC 59.763 36.000 0.00 0.00 38.76 2.17
3003 8427 0.824759 AAGCCGCACTTCCTACCTAG 59.175 55.000 0.00 0.00 30.77 3.02
3004 8428 0.535335 CAAGCCGCACTTCCTACCTA 59.465 55.000 0.00 0.00 36.04 3.08
3005 8429 1.296715 CAAGCCGCACTTCCTACCT 59.703 57.895 0.00 0.00 36.04 3.08
3008 8432 2.046314 GGCAAGCCGCACTTCCTA 60.046 61.111 0.00 0.00 45.17 2.94
3037 8461 2.279918 GTATACCCGGCAGCGGTG 60.280 66.667 10.98 10.98 34.66 4.94
3038 8462 2.760799 TGTATACCCGGCAGCGGT 60.761 61.111 0.00 0.00 37.40 5.68
3039 8463 1.457823 TACTGTATACCCGGCAGCGG 61.458 60.000 0.00 0.00 33.87 5.52
3040 8464 0.386476 TTACTGTATACCCGGCAGCG 59.614 55.000 0.00 0.00 33.87 5.18
3041 8465 2.607631 TTTACTGTATACCCGGCAGC 57.392 50.000 0.00 0.00 33.87 5.25
3042 8466 4.330944 TGATTTACTGTATACCCGGCAG 57.669 45.455 0.00 0.00 36.41 4.85
3043 8467 4.967084 ATGATTTACTGTATACCCGGCA 57.033 40.909 0.00 0.00 0.00 5.69
3044 8468 7.328737 AGATAATGATTTACTGTATACCCGGC 58.671 38.462 0.00 0.00 0.00 6.13
3081 8505 9.990360 ACGTCTAAAACCCAATTTAAATTTCAT 57.010 25.926 10.77 0.00 0.00 2.57
3089 8513 9.941325 TGTTATCTACGTCTAAAACCCAATTTA 57.059 29.630 0.00 0.00 0.00 1.40
3090 8514 8.851541 TGTTATCTACGTCTAAAACCCAATTT 57.148 30.769 0.00 0.00 0.00 1.82
3094 8518 9.537192 CAATATGTTATCTACGTCTAAAACCCA 57.463 33.333 0.00 0.00 0.00 4.51
3095 8519 8.985805 CCAATATGTTATCTACGTCTAAAACCC 58.014 37.037 0.00 0.00 0.00 4.11
3096 8520 9.754382 TCCAATATGTTATCTACGTCTAAAACC 57.246 33.333 0.00 0.00 0.00 3.27
3134 8558 9.603921 ATTTTTGAACTGTTCATCATCTTTGTT 57.396 25.926 22.60 0.00 39.84 2.83
3138 8562 9.362539 GCATATTTTTGAACTGTTCATCATCTT 57.637 29.630 22.60 9.45 39.84 2.40
3139 8563 8.525316 TGCATATTTTTGAACTGTTCATCATCT 58.475 29.630 22.60 10.22 39.84 2.90
3140 8564 8.692110 TGCATATTTTTGAACTGTTCATCATC 57.308 30.769 22.60 8.51 39.84 2.92
3141 8565 9.309516 GATGCATATTTTTGAACTGTTCATCAT 57.690 29.630 22.60 16.25 39.84 2.45
3142 8566 7.760794 GGATGCATATTTTTGAACTGTTCATCA 59.239 33.333 22.60 10.83 39.84 3.07
3143 8567 7.977853 AGGATGCATATTTTTGAACTGTTCATC 59.022 33.333 22.60 12.96 39.84 2.92
3144 8568 7.844009 AGGATGCATATTTTTGAACTGTTCAT 58.156 30.769 22.60 11.20 39.84 2.57
3145 8569 7.039853 TGAGGATGCATATTTTTGAACTGTTCA 60.040 33.333 18.69 18.69 38.04 3.18
3146 8570 7.315142 TGAGGATGCATATTTTTGAACTGTTC 58.685 34.615 13.49 13.49 0.00 3.18
3147 8571 7.177216 TCTGAGGATGCATATTTTTGAACTGTT 59.823 33.333 0.00 0.00 0.00 3.16
3148 8572 6.660521 TCTGAGGATGCATATTTTTGAACTGT 59.339 34.615 0.00 0.00 0.00 3.55
3149 8573 7.092137 TCTGAGGATGCATATTTTTGAACTG 57.908 36.000 0.00 0.00 0.00 3.16
3150 8574 7.707624 TTCTGAGGATGCATATTTTTGAACT 57.292 32.000 0.00 0.00 0.00 3.01
3151 8575 8.246180 TCTTTCTGAGGATGCATATTTTTGAAC 58.754 33.333 0.00 0.00 0.00 3.18
3152 8576 8.352137 TCTTTCTGAGGATGCATATTTTTGAA 57.648 30.769 0.00 0.00 0.00 2.69
3153 8577 7.830697 TCTCTTTCTGAGGATGCATATTTTTGA 59.169 33.333 0.00 0.00 42.86 2.69
3154 8578 7.993101 TCTCTTTCTGAGGATGCATATTTTTG 58.007 34.615 0.00 0.00 42.86 2.44
3155 8579 8.585471 TTCTCTTTCTGAGGATGCATATTTTT 57.415 30.769 0.00 0.00 42.86 1.94
3156 8580 8.763984 ATTCTCTTTCTGAGGATGCATATTTT 57.236 30.769 0.00 0.00 39.49 1.82
3157 8581 8.763984 AATTCTCTTTCTGAGGATGCATATTT 57.236 30.769 0.00 0.00 40.05 1.40
3159 8583 9.451002 CATAATTCTCTTTCTGAGGATGCATAT 57.549 33.333 0.00 0.00 40.05 1.78
3160 8584 8.435187 ACATAATTCTCTTTCTGAGGATGCATA 58.565 33.333 0.00 0.00 40.05 3.14
3161 8585 7.288560 ACATAATTCTCTTTCTGAGGATGCAT 58.711 34.615 0.00 0.00 40.05 3.96
3162 8586 6.656902 ACATAATTCTCTTTCTGAGGATGCA 58.343 36.000 0.00 0.00 40.05 3.96
3163 8587 7.565323 AACATAATTCTCTTTCTGAGGATGC 57.435 36.000 0.00 0.00 40.05 3.91
3185 8609 7.598278 TCATGTGACCACCAATGTTATAAAAC 58.402 34.615 0.00 0.00 36.07 2.43
3186 8610 7.767250 TCATGTGACCACCAATGTTATAAAA 57.233 32.000 0.00 0.00 0.00 1.52
3187 8611 7.767250 TTCATGTGACCACCAATGTTATAAA 57.233 32.000 0.00 0.00 0.00 1.40
3188 8612 7.767250 TTTCATGTGACCACCAATGTTATAA 57.233 32.000 0.00 0.00 0.00 0.98
3189 8613 7.767250 TTTTCATGTGACCACCAATGTTATA 57.233 32.000 0.00 0.00 0.00 0.98
3190 8614 6.662865 TTTTCATGTGACCACCAATGTTAT 57.337 33.333 0.00 0.00 0.00 1.89
3191 8615 6.662865 ATTTTCATGTGACCACCAATGTTA 57.337 33.333 0.00 0.00 0.00 2.41
3192 8616 5.549742 ATTTTCATGTGACCACCAATGTT 57.450 34.783 0.00 0.00 0.00 2.71
3193 8617 5.549742 AATTTTCATGTGACCACCAATGT 57.450 34.783 0.00 0.00 0.00 2.71
3194 8618 7.818446 TGATAAATTTTCATGTGACCACCAATG 59.182 33.333 0.00 0.00 0.00 2.82
3195 8619 7.905265 TGATAAATTTTCATGTGACCACCAAT 58.095 30.769 0.00 0.00 0.00 3.16
3196 8620 7.295322 TGATAAATTTTCATGTGACCACCAA 57.705 32.000 0.00 0.00 0.00 3.67
3197 8621 6.907853 TGATAAATTTTCATGTGACCACCA 57.092 33.333 0.00 0.00 0.00 4.17
3198 8622 8.600449 TTTTGATAAATTTTCATGTGACCACC 57.400 30.769 0.00 0.00 0.00 4.61
3222 8646 9.525409 GCTCAATGTATCATTTCTGCTTATTTT 57.475 29.630 0.00 0.00 0.00 1.82
3223 8647 8.910944 AGCTCAATGTATCATTTCTGCTTATTT 58.089 29.630 0.00 0.00 0.00 1.40
3224 8648 8.461249 AGCTCAATGTATCATTTCTGCTTATT 57.539 30.769 0.00 0.00 0.00 1.40
3225 8649 8.461249 AAGCTCAATGTATCATTTCTGCTTAT 57.539 30.769 16.56 3.89 35.64 1.73
3226 8650 7.870509 AAGCTCAATGTATCATTTCTGCTTA 57.129 32.000 16.56 0.00 35.64 3.09
3227 8651 6.770746 AAGCTCAATGTATCATTTCTGCTT 57.229 33.333 14.35 14.35 33.06 3.91
3228 8652 9.736414 ATATAAGCTCAATGTATCATTTCTGCT 57.264 29.630 0.00 0.00 0.00 4.24
3248 8672 6.870965 AGCCTGTCTTCGAATGCTTATATAAG 59.129 38.462 16.79 16.79 36.40 1.73
3249 8673 6.759272 AGCCTGTCTTCGAATGCTTATATAA 58.241 36.000 0.00 0.00 0.00 0.98
3250 8674 6.346477 AGCCTGTCTTCGAATGCTTATATA 57.654 37.500 0.00 0.00 0.00 0.86
3251 8675 5.220710 AGCCTGTCTTCGAATGCTTATAT 57.779 39.130 0.00 0.00 0.00 0.86
3252 8676 4.672587 AGCCTGTCTTCGAATGCTTATA 57.327 40.909 0.00 0.00 0.00 0.98
3253 8677 3.550437 AGCCTGTCTTCGAATGCTTAT 57.450 42.857 0.00 0.00 0.00 1.73
3254 8678 4.371786 CATAGCCTGTCTTCGAATGCTTA 58.628 43.478 0.00 0.00 0.00 3.09
3255 8679 3.201290 CATAGCCTGTCTTCGAATGCTT 58.799 45.455 0.00 0.00 0.00 3.91
3256 8680 2.831333 CATAGCCTGTCTTCGAATGCT 58.169 47.619 0.00 5.03 0.00 3.79
3257 8681 1.262683 GCATAGCCTGTCTTCGAATGC 59.737 52.381 0.00 0.00 0.00 3.56
3258 8682 2.543012 CTGCATAGCCTGTCTTCGAATG 59.457 50.000 0.00 0.00 0.00 2.67
3259 8683 2.432146 TCTGCATAGCCTGTCTTCGAAT 59.568 45.455 0.00 0.00 0.00 3.34
3260 8684 1.824852 TCTGCATAGCCTGTCTTCGAA 59.175 47.619 0.00 0.00 0.00 3.71
3261 8685 1.135139 GTCTGCATAGCCTGTCTTCGA 59.865 52.381 0.00 0.00 0.00 3.71
3262 8686 1.134995 TGTCTGCATAGCCTGTCTTCG 60.135 52.381 0.00 0.00 0.00 3.79
3263 8687 2.680312 TGTCTGCATAGCCTGTCTTC 57.320 50.000 0.00 0.00 0.00 2.87
3264 8688 4.163078 AGTTATGTCTGCATAGCCTGTCTT 59.837 41.667 0.00 0.00 38.90 3.01
3265 8689 3.708631 AGTTATGTCTGCATAGCCTGTCT 59.291 43.478 0.00 0.00 38.90 3.41
3266 8690 4.054671 GAGTTATGTCTGCATAGCCTGTC 58.945 47.826 0.00 0.00 38.90 3.51
3267 8691 3.452264 TGAGTTATGTCTGCATAGCCTGT 59.548 43.478 0.00 0.00 38.90 4.00
3268 8692 4.063998 TGAGTTATGTCTGCATAGCCTG 57.936 45.455 0.00 0.00 38.90 4.85
3269 8693 4.080919 TGTTGAGTTATGTCTGCATAGCCT 60.081 41.667 0.00 0.00 38.90 4.58
3270 8694 4.191544 TGTTGAGTTATGTCTGCATAGCC 58.808 43.478 0.00 0.00 38.90 3.93
3271 8695 5.525012 TCATGTTGAGTTATGTCTGCATAGC 59.475 40.000 0.00 0.00 38.64 2.97
3272 8696 7.359014 CGATCATGTTGAGTTATGTCTGCATAG 60.359 40.741 0.00 0.00 38.64 2.23
3273 8697 6.421801 CGATCATGTTGAGTTATGTCTGCATA 59.578 38.462 0.00 0.00 36.58 3.14
3274 8698 5.235831 CGATCATGTTGAGTTATGTCTGCAT 59.764 40.000 0.00 0.00 39.03 3.96
3275 8699 4.567959 CGATCATGTTGAGTTATGTCTGCA 59.432 41.667 0.00 0.00 0.00 4.41
3276 8700 4.805719 TCGATCATGTTGAGTTATGTCTGC 59.194 41.667 0.00 0.00 0.00 4.26
3277 8701 8.754230 ATATCGATCATGTTGAGTTATGTCTG 57.246 34.615 0.00 0.00 0.00 3.51
3285 8709 9.561270 CGAACTATTATATCGATCATGTTGAGT 57.439 33.333 0.00 0.00 38.82 3.41
3286 8710 9.561270 ACGAACTATTATATCGATCATGTTGAG 57.439 33.333 0.00 0.00 39.73 3.02
3296 8720 9.445878 ACCTGAATCTACGAACTATTATATCGA 57.554 33.333 2.75 0.00 39.73 3.59
3303 8727 8.196103 GGTCTTTACCTGAATCTACGAACTATT 58.804 37.037 0.00 0.00 43.08 1.73
3304 8728 7.468357 CGGTCTTTACCTGAATCTACGAACTAT 60.468 40.741 0.00 0.00 44.35 2.12
3305 8729 6.183360 CGGTCTTTACCTGAATCTACGAACTA 60.183 42.308 0.00 0.00 44.35 2.24
3306 8730 5.392811 CGGTCTTTACCTGAATCTACGAACT 60.393 44.000 0.00 0.00 44.35 3.01
3307 8731 4.797349 CGGTCTTTACCTGAATCTACGAAC 59.203 45.833 0.00 0.00 44.35 3.95
3308 8732 4.142315 CCGGTCTTTACCTGAATCTACGAA 60.142 45.833 0.00 0.00 44.35 3.85
3309 8733 3.379372 CCGGTCTTTACCTGAATCTACGA 59.621 47.826 0.00 0.00 44.35 3.43
3310 8734 3.379372 TCCGGTCTTTACCTGAATCTACG 59.621 47.826 0.00 0.00 44.35 3.51
3311 8735 4.996788 TCCGGTCTTTACCTGAATCTAC 57.003 45.455 0.00 0.00 44.35 2.59
3312 8736 6.781014 ACATATCCGGTCTTTACCTGAATCTA 59.219 38.462 0.00 0.00 41.68 1.98
3313 8737 5.602978 ACATATCCGGTCTTTACCTGAATCT 59.397 40.000 0.00 0.00 41.68 2.40
3314 8738 5.855045 ACATATCCGGTCTTTACCTGAATC 58.145 41.667 0.00 0.00 41.68 2.52
3315 8739 5.888982 ACATATCCGGTCTTTACCTGAAT 57.111 39.130 0.00 0.00 41.68 2.57
3316 8740 5.046159 ACAACATATCCGGTCTTTACCTGAA 60.046 40.000 0.00 0.00 41.68 3.02
3317 8741 4.468510 ACAACATATCCGGTCTTTACCTGA 59.531 41.667 0.00 0.00 44.35 3.86
3318 8742 4.766375 ACAACATATCCGGTCTTTACCTG 58.234 43.478 0.00 0.00 44.35 4.00
3319 8743 4.141779 GGACAACATATCCGGTCTTTACCT 60.142 45.833 0.00 0.00 44.35 3.08
3320 8744 4.124970 GGACAACATATCCGGTCTTTACC 58.875 47.826 0.00 0.00 42.95 2.85
3321 8745 5.019785 AGGACAACATATCCGGTCTTTAC 57.980 43.478 0.00 0.00 41.52 2.01
3322 8746 5.687166 AAGGACAACATATCCGGTCTTTA 57.313 39.130 0.00 0.00 41.52 1.85
3323 8747 4.569719 AAGGACAACATATCCGGTCTTT 57.430 40.909 0.00 0.00 41.52 2.52
3324 8748 5.888982 ATAAGGACAACATATCCGGTCTT 57.111 39.130 0.00 0.00 41.52 3.01
3325 8749 6.208994 GTCTATAAGGACAACATATCCGGTCT 59.791 42.308 0.00 0.00 41.52 3.85
3326 8750 6.015688 TGTCTATAAGGACAACATATCCGGTC 60.016 42.308 0.00 0.00 42.35 4.79
3327 8751 5.836898 TGTCTATAAGGACAACATATCCGGT 59.163 40.000 0.00 0.00 42.35 5.28
3328 8752 6.157211 GTGTCTATAAGGACAACATATCCGG 58.843 44.000 0.00 0.00 46.00 5.14
3337 8761 4.164981 ACTGGTGGTGTCTATAAGGACAA 58.835 43.478 0.00 0.00 46.00 3.18
3338 8762 3.786553 ACTGGTGGTGTCTATAAGGACA 58.213 45.455 0.00 0.00 42.96 4.02
3339 8763 5.927281 TTACTGGTGGTGTCTATAAGGAC 57.073 43.478 0.00 0.00 36.81 3.85
3340 8764 7.620491 TGTATTTACTGGTGGTGTCTATAAGGA 59.380 37.037 0.00 0.00 0.00 3.36
3341 8765 7.788026 TGTATTTACTGGTGGTGTCTATAAGG 58.212 38.462 0.00 0.00 0.00 2.69
3347 8771 9.998106 GAATATATGTATTTACTGGTGGTGTCT 57.002 33.333 0.00 0.00 30.75 3.41
3348 8772 9.772973 TGAATATATGTATTTACTGGTGGTGTC 57.227 33.333 0.00 0.00 30.75 3.67
3349 8773 9.778741 CTGAATATATGTATTTACTGGTGGTGT 57.221 33.333 0.00 0.00 30.75 4.16
3350 8774 9.219603 CCTGAATATATGTATTTACTGGTGGTG 57.780 37.037 0.00 0.00 30.75 4.17
3351 8775 8.945193 ACCTGAATATATGTATTTACTGGTGGT 58.055 33.333 9.86 2.27 31.24 4.16
3352 8776 9.793259 AACCTGAATATATGTATTTACTGGTGG 57.207 33.333 10.81 2.38 32.04 4.61
3364 8788 9.658799 GATGCTACATACAACCTGAATATATGT 57.341 33.333 0.00 0.00 39.28 2.29
3365 8789 9.881649 AGATGCTACATACAACCTGAATATATG 57.118 33.333 0.00 0.00 0.00 1.78
3367 8791 9.314133 AGAGATGCTACATACAACCTGAATATA 57.686 33.333 0.00 0.00 0.00 0.86
3368 8792 8.200024 AGAGATGCTACATACAACCTGAATAT 57.800 34.615 0.00 0.00 0.00 1.28
3369 8793 7.603180 AGAGATGCTACATACAACCTGAATA 57.397 36.000 0.00 0.00 0.00 1.75
3370 8794 6.491714 AGAGATGCTACATACAACCTGAAT 57.508 37.500 0.00 0.00 0.00 2.57
3371 8795 5.939764 AGAGATGCTACATACAACCTGAA 57.060 39.130 0.00 0.00 0.00 3.02
3372 8796 7.603180 AATAGAGATGCTACATACAACCTGA 57.397 36.000 0.00 0.00 0.00 3.86
3373 8797 9.935241 AATAATAGAGATGCTACATACAACCTG 57.065 33.333 0.00 0.00 0.00 4.00
3386 8810 9.159470 GCAAACGTAAAAGAATAATAGAGATGC 57.841 33.333 0.00 0.00 0.00 3.91
3394 8818 8.974408 GGAACAAAGCAAACGTAAAAGAATAAT 58.026 29.630 0.00 0.00 0.00 1.28
3395 8819 7.435784 GGGAACAAAGCAAACGTAAAAGAATAA 59.564 33.333 0.00 0.00 0.00 1.40
3396 8820 6.919115 GGGAACAAAGCAAACGTAAAAGAATA 59.081 34.615 0.00 0.00 0.00 1.75
3397 8821 5.751509 GGGAACAAAGCAAACGTAAAAGAAT 59.248 36.000 0.00 0.00 0.00 2.40
3398 8822 5.103687 GGGAACAAAGCAAACGTAAAAGAA 58.896 37.500 0.00 0.00 0.00 2.52
3399 8823 4.440387 GGGGAACAAAGCAAACGTAAAAGA 60.440 41.667 0.00 0.00 0.00 2.52
3400 8824 3.799963 GGGGAACAAAGCAAACGTAAAAG 59.200 43.478 0.00 0.00 0.00 2.27
3401 8825 3.430513 GGGGGAACAAAGCAAACGTAAAA 60.431 43.478 0.00 0.00 0.00 1.52
3402 8826 2.101082 GGGGGAACAAAGCAAACGTAAA 59.899 45.455 0.00 0.00 0.00 2.01
3403 8827 1.682323 GGGGGAACAAAGCAAACGTAA 59.318 47.619 0.00 0.00 0.00 3.18
3404 8828 1.133730 AGGGGGAACAAAGCAAACGTA 60.134 47.619 0.00 0.00 0.00 3.57
3405 8829 0.396556 AGGGGGAACAAAGCAAACGT 60.397 50.000 0.00 0.00 0.00 3.99
3406 8830 0.031994 CAGGGGGAACAAAGCAAACG 59.968 55.000 0.00 0.00 0.00 3.60
3407 8831 1.119684 ACAGGGGGAACAAAGCAAAC 58.880 50.000 0.00 0.00 0.00 2.93
3408 8832 1.872773 AACAGGGGGAACAAAGCAAA 58.127 45.000 0.00 0.00 0.00 3.68
3409 8833 1.872773 AAACAGGGGGAACAAAGCAA 58.127 45.000 0.00 0.00 0.00 3.91
3410 8834 1.872773 AAAACAGGGGGAACAAAGCA 58.127 45.000 0.00 0.00 0.00 3.91
3411 8835 4.039852 TGATTAAAACAGGGGGAACAAAGC 59.960 41.667 0.00 0.00 0.00 3.51
3412 8836 5.799827 TGATTAAAACAGGGGGAACAAAG 57.200 39.130 0.00 0.00 0.00 2.77
3413 8837 7.857404 TTATGATTAAAACAGGGGGAACAAA 57.143 32.000 0.00 0.00 0.00 2.83
3414 8838 7.857404 TTTATGATTAAAACAGGGGGAACAA 57.143 32.000 0.00 0.00 0.00 2.83
3415 8839 9.196139 CTATTTATGATTAAAACAGGGGGAACA 57.804 33.333 0.00 0.00 31.33 3.18
3416 8840 8.638873 CCTATTTATGATTAAAACAGGGGGAAC 58.361 37.037 0.00 0.00 33.75 3.62
3417 8841 8.776061 CCTATTTATGATTAAAACAGGGGGAA 57.224 34.615 0.00 0.00 33.75 3.97


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.