Multiple sequence alignment - TraesCS7D01G499300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G499300 chr7D 100.000 5560 0 0 1 5560 605829164 605834723 0.000000e+00 10268.0
1 TraesCS7D01G499300 chr7D 89.000 1100 93 19 3521 4610 605746731 605747812 0.000000e+00 1336.0
2 TraesCS7D01G499300 chr7D 86.558 1168 101 28 3503 4655 605754354 605755480 0.000000e+00 1236.0
3 TraesCS7D01G499300 chr7D 85.790 1133 127 21 3521 4637 605867216 605868330 0.000000e+00 1170.0
4 TraesCS7D01G499300 chr7D 85.323 1131 131 26 3521 4637 605911401 605912510 0.000000e+00 1136.0
5 TraesCS7D01G499300 chr7D 85.154 586 51 24 912 1481 605908273 605908838 8.080000e-158 568.0
6 TraesCS7D01G499300 chr7D 86.128 483 59 4 1 479 479031755 479031277 1.070000e-141 514.0
7 TraesCS7D01G499300 chr7D 83.516 546 53 19 1682 2198 605752379 605752916 5.040000e-130 475.0
8 TraesCS7D01G499300 chr7D 94.275 262 15 0 1218 1479 605860720 605860981 8.680000e-108 401.0
9 TraesCS7D01G499300 chr7D 82.424 495 46 20 3012 3496 605910875 605911338 1.450000e-105 394.0
10 TraesCS7D01G499300 chr7D 86.335 322 39 2 3174 3495 605866836 605867152 4.120000e-91 346.0
11 TraesCS7D01G499300 chr7D 81.210 463 42 25 2530 2957 605753323 605753775 1.150000e-86 331.0
12 TraesCS7D01G499300 chr7D 93.035 201 14 0 1689 1889 605909125 605909325 1.510000e-75 294.0
13 TraesCS7D01G499300 chr7D 78.758 499 58 21 2626 3103 605863541 605864012 1.960000e-74 291.0
14 TraesCS7D01G499300 chr7D 89.000 200 22 0 1690 1889 605862022 605862221 1.200000e-61 248.0
15 TraesCS7D01G499300 chr7D 94.118 153 9 0 2009 2161 605909524 605909676 3.350000e-57 233.0
16 TraesCS7D01G499300 chr7D 82.857 175 28 2 513 685 62222400 62222574 7.460000e-34 156.0
17 TraesCS7D01G499300 chr7D 82.584 178 25 6 511 685 479512327 479512153 9.650000e-33 152.0
18 TraesCS7D01G499300 chr7D 89.231 65 6 1 2463 2527 605753214 605753277 4.620000e-11 80.5
19 TraesCS7D01G499300 chr7A 91.807 3271 166 42 1538 4767 697058144 697061353 0.000000e+00 4462.0
20 TraesCS7D01G499300 chr7A 88.500 1113 105 14 3552 4658 697013099 697014194 0.000000e+00 1325.0
21 TraesCS7D01G499300 chr7A 86.055 1133 124 22 3521 4637 697117596 697118710 0.000000e+00 1186.0
22 TraesCS7D01G499300 chr7A 89.097 587 32 16 900 1486 697057590 697058144 0.000000e+00 701.0
23 TraesCS7D01G499300 chr7A 80.305 919 100 28 2626 3495 697116646 697117532 2.200000e-173 619.0
24 TraesCS7D01G499300 chr7A 83.566 572 62 26 915 1481 697137776 697138320 1.790000e-139 507.0
25 TraesCS7D01G499300 chr7A 84.980 506 47 14 3012 3499 697140257 697140751 2.330000e-133 486.0
26 TraesCS7D01G499300 chr7A 93.175 337 12 2 5225 5560 697094027 697094353 8.370000e-133 484.0
27 TraesCS7D01G499300 chr7A 84.585 506 49 14 3012 3499 697255894 697256388 5.040000e-130 475.0
28 TraesCS7D01G499300 chr7A 91.743 327 19 6 4906 5228 697061864 697062186 1.100000e-121 448.0
29 TraesCS7D01G499300 chr7A 93.893 262 16 0 1218 1479 697109128 697109389 4.040000e-106 396.0
30 TraesCS7D01G499300 chr7A 92.611 203 15 0 1689 1891 697138605 697138807 5.450000e-75 292.0
31 TraesCS7D01G499300 chr7A 78.178 472 62 14 58 488 293022112 293021641 4.270000e-66 263.0
32 TraesCS7D01G499300 chr7A 95.364 151 6 1 4767 4916 697061538 697061688 7.200000e-59 239.0
33 TraesCS7D01G499300 chr7A 77.752 436 62 22 2544 2959 697139515 697139935 9.310000e-58 235.0
34 TraesCS7D01G499300 chr7A 86.755 151 18 2 4935 5083 697014187 697014337 3.450000e-37 167.0
35 TraesCS7D01G499300 chr7B 93.678 2594 110 32 900 3467 689903358 689905923 0.000000e+00 3832.0
36 TraesCS7D01G499300 chr7B 85.375 1559 159 31 3102 4622 689967610 689969137 0.000000e+00 1552.0
37 TraesCS7D01G499300 chr7B 88.452 1169 100 19 3497 4655 689205850 689206993 0.000000e+00 1378.0
38 TraesCS7D01G499300 chr7B 88.095 1176 101 23 3497 4658 689697777 689698927 0.000000e+00 1360.0
39 TraesCS7D01G499300 chr7B 88.616 1098 103 14 3521 4610 689200570 689201653 0.000000e+00 1315.0
40 TraesCS7D01G499300 chr7B 85.185 1134 131 26 3521 4637 690015943 690017056 0.000000e+00 1129.0
41 TraesCS7D01G499300 chr7B 90.328 579 34 13 913 1483 689965384 689965948 0.000000e+00 739.0
42 TraesCS7D01G499300 chr7B 86.460 613 57 10 1594 2188 689965983 689966587 0.000000e+00 649.0
43 TraesCS7D01G499300 chr7B 80.179 893 110 34 2626 3495 689925139 689925987 1.710000e-169 606.0
44 TraesCS7D01G499300 chr7B 94.177 395 16 4 4867 5260 689909436 689909824 3.710000e-166 595.0
45 TraesCS7D01G499300 chr7B 85.229 589 56 18 912 1481 690012783 690013359 1.340000e-160 577.0
46 TraesCS7D01G499300 chr7B 96.417 307 11 0 5254 5560 689911517 689911823 1.790000e-139 507.0
47 TraesCS7D01G499300 chr7B 84.749 518 50 10 2997 3496 690015374 690015880 5.000000e-135 492.0
48 TraesCS7D01G499300 chr7B 96.886 289 9 0 3465 3753 689906081 689906369 8.370000e-133 484.0
49 TraesCS7D01G499300 chr7B 82.523 555 60 23 1682 2207 689204022 689204568 2.360000e-123 453.0
50 TraesCS7D01G499300 chr7B 92.565 269 20 0 1211 1479 689922452 689922720 2.430000e-103 387.0
51 TraesCS7D01G499300 chr7B 81.221 426 44 19 1810 2207 689696200 689696617 1.500000e-80 311.0
52 TraesCS7D01G499300 chr7B 80.042 471 45 24 2530 2973 689205082 689205530 2.520000e-78 303.0
53 TraesCS7D01G499300 chr7B 92.488 213 15 1 1995 2207 689689947 689690158 2.520000e-78 303.0
54 TraesCS7D01G499300 chr7B 79.787 470 48 24 2530 2973 689697009 689697457 1.170000e-76 298.0
55 TraesCS7D01G499300 chr7B 87.747 253 30 1 5177 5429 689202046 689202297 1.510000e-75 294.0
56 TraesCS7D01G499300 chr7B 87.259 259 30 3 4934 5191 689201770 689202026 5.450000e-75 292.0
57 TraesCS7D01G499300 chr7B 79.574 470 49 24 2530 2973 689690550 689690998 5.450000e-75 292.0
58 TraesCS7D01G499300 chr7B 91.542 201 17 0 1689 1889 690013642 690013842 1.530000e-70 278.0
59 TraesCS7D01G499300 chr7B 85.409 281 16 10 2690 2949 689967026 689967302 9.180000e-68 268.0
60 TraesCS7D01G499300 chr7B 92.810 153 11 0 2009 2161 690014043 690014195 7.250000e-54 222.0
61 TraesCS7D01G499300 chr7B 94.595 111 4 2 4775 4885 689907520 689907628 2.660000e-38 171.0
62 TraesCS7D01G499300 chr7B 85.714 154 16 5 4934 5083 689206988 689207139 2.070000e-34 158.0
63 TraesCS7D01G499300 chr7B 82.500 120 15 6 2411 2527 689204917 689205033 3.540000e-17 100.0
64 TraesCS7D01G499300 chr5D 81.312 503 58 13 2 470 371290122 371289622 5.260000e-100 375.0
65 TraesCS7D01G499300 chr5D 77.778 522 64 31 15 485 398322817 398322297 1.970000e-69 274.0
66 TraesCS7D01G499300 chr5D 78.771 179 28 6 511 685 432800220 432800048 1.640000e-20 111.0
67 TraesCS7D01G499300 chr5A 80.426 516 69 12 3 487 476905710 476906224 1.140000e-96 364.0
68 TraesCS7D01G499300 chr5A 79.365 315 47 13 2 310 681637940 681637638 7.300000e-49 206.0
69 TraesCS7D01G499300 chr4B 79.127 527 67 13 1 502 622016125 622015617 1.930000e-84 324.0
70 TraesCS7D01G499300 chr4B 82.274 299 30 9 3 278 171140968 171140670 2.590000e-58 237.0
71 TraesCS7D01G499300 chr3A 78.879 535 53 16 5 488 708217241 708217766 1.950000e-79 307.0
72 TraesCS7D01G499300 chr3A 88.333 60 7 0 624 683 648724127 648724186 7.730000e-09 73.1
73 TraesCS7D01G499300 chr1D 78.842 501 71 23 2 470 332685990 332686487 7.000000e-79 305.0
74 TraesCS7D01G499300 chr2B 78.862 492 72 15 4 470 23807654 23808138 2.520000e-78 303.0
75 TraesCS7D01G499300 chr1A 78.235 510 60 29 2 469 588943030 588943530 4.240000e-71 279.0
76 TraesCS7D01G499300 chr1A 75.720 486 78 21 3 451 234238127 234238609 2.030000e-49 207.0
77 TraesCS7D01G499300 chr1A 79.558 181 29 8 511 685 136960986 136960808 7.560000e-24 122.0
78 TraesCS7D01G499300 chr3D 75.720 486 58 28 3 447 12060880 12061346 7.350000e-44 189.0
79 TraesCS7D01G499300 chr3D 83.333 72 11 1 612 682 2406398 2406327 1.290000e-06 65.8
80 TraesCS7D01G499300 chr3B 83.140 172 27 2 514 683 534533793 534533964 7.460000e-34 156.0
81 TraesCS7D01G499300 chr3B 76.875 160 28 8 530 685 732056075 732055921 1.280000e-11 82.4
82 TraesCS7D01G499300 chr2D 76.647 334 43 15 2 308 568794932 568795257 9.650000e-33 152.0
83 TraesCS7D01G499300 chr2D 80.000 205 20 11 1 201 640717573 640717386 1.260000e-26 132.0
84 TraesCS7D01G499300 chr6B 92.308 78 6 0 4659 4736 712626891 712626814 1.640000e-20 111.0
85 TraesCS7D01G499300 chr2A 88.333 60 7 0 626 685 86064564 86064623 7.730000e-09 73.1
86 TraesCS7D01G499300 chr1B 79.612 103 15 6 2 101 39365925 39366024 9.990000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G499300 chr7D 605829164 605834723 5559 False 10268.000000 10268 100.000000 1 5560 1 chr7D.!!$F3 5559
1 TraesCS7D01G499300 chr7D 605746731 605747812 1081 False 1336.000000 1336 89.000000 3521 4610 1 chr7D.!!$F2 1089
2 TraesCS7D01G499300 chr7D 605752379 605755480 3101 False 530.625000 1236 85.128750 1682 4655 4 chr7D.!!$F4 2973
3 TraesCS7D01G499300 chr7D 605908273 605912510 4237 False 525.000000 1136 88.010800 912 4637 5 chr7D.!!$F6 3725
4 TraesCS7D01G499300 chr7D 605860720 605868330 7610 False 491.200000 1170 86.831600 1218 4637 5 chr7D.!!$F5 3419
5 TraesCS7D01G499300 chr7A 697057590 697062186 4596 False 1462.500000 4462 92.002750 900 5228 4 chr7A.!!$F5 4328
6 TraesCS7D01G499300 chr7A 697116646 697118710 2064 False 902.500000 1186 83.180000 2626 4637 2 chr7A.!!$F6 2011
7 TraesCS7D01G499300 chr7A 697013099 697014337 1238 False 746.000000 1325 87.627500 3552 5083 2 chr7A.!!$F4 1531
8 TraesCS7D01G499300 chr7A 697137776 697140751 2975 False 380.000000 507 84.727250 915 3499 4 chr7A.!!$F7 2584
9 TraesCS7D01G499300 chr7B 689903358 689911823 8465 False 1117.800000 3832 95.150600 900 5560 5 chr7B.!!$F4 4660
10 TraesCS7D01G499300 chr7B 689965384 689969137 3753 False 802.000000 1552 86.893000 913 4622 4 chr7B.!!$F6 3709
11 TraesCS7D01G499300 chr7B 689696200 689698927 2727 False 656.333333 1360 83.034333 1810 4658 3 chr7B.!!$F3 2848
12 TraesCS7D01G499300 chr7B 690012783 690017056 4273 False 539.600000 1129 87.903000 912 4637 5 chr7B.!!$F7 3725
13 TraesCS7D01G499300 chr7B 689200570 689207139 6569 False 536.625000 1378 85.356625 1682 5429 8 chr7B.!!$F1 3747
14 TraesCS7D01G499300 chr7B 689922452 689925987 3535 False 496.500000 606 86.372000 1211 3495 2 chr7B.!!$F5 2284
15 TraesCS7D01G499300 chr7B 689689947 689690998 1051 False 297.500000 303 86.031000 1995 2973 2 chr7B.!!$F2 978
16 TraesCS7D01G499300 chr5D 371289622 371290122 500 True 375.000000 375 81.312000 2 470 1 chr5D.!!$R1 468
17 TraesCS7D01G499300 chr5D 398322297 398322817 520 True 274.000000 274 77.778000 15 485 1 chr5D.!!$R2 470
18 TraesCS7D01G499300 chr5A 476905710 476906224 514 False 364.000000 364 80.426000 3 487 1 chr5A.!!$F1 484
19 TraesCS7D01G499300 chr4B 622015617 622016125 508 True 324.000000 324 79.127000 1 502 1 chr4B.!!$R2 501
20 TraesCS7D01G499300 chr3A 708217241 708217766 525 False 307.000000 307 78.879000 5 488 1 chr3A.!!$F2 483
21 TraesCS7D01G499300 chr1A 588943030 588943530 500 False 279.000000 279 78.235000 2 469 1 chr1A.!!$F2 467

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
732 807 0.037232 GCTAGACTGACGTGCCCTTT 60.037 55.000 0.00 0.00 0.00 3.11 F
735 810 0.038526 AGACTGACGTGCCCTTTACG 60.039 55.000 0.00 0.00 46.31 3.18 F
800 875 0.043334 AGTGAGATAGGCCCACCAGT 59.957 55.000 0.00 0.00 39.06 4.00 F
877 952 0.093875 TTTATTGCGCGCGTGTGTAG 59.906 50.000 32.35 0.92 0.00 2.74 F
879 954 0.179169 TATTGCGCGCGTGTGTAGTA 60.179 50.000 32.35 11.77 0.00 1.82 F
882 957 0.179169 TGCGCGCGTGTGTAGTATTA 60.179 50.000 32.35 0.00 0.00 0.98 F
1942 4716 0.811281 CCTGAGGGCGGACAATTTTC 59.189 55.000 0.00 0.00 0.00 2.29 F
2049 5574 1.888512 GCTTCATGGTTCAGGCTCAAA 59.111 47.619 0.00 0.00 0.00 2.69 F
2851 7294 2.015587 CTGAGAGCCTGAATTGCTTCC 58.984 52.381 0.00 0.00 39.69 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1871 4591 0.618458 TGGTGATGGACTTACTGCCC 59.382 55.000 0.00 0.0 0.00 5.36 R
1924 4695 1.826385 AGAAAATTGTCCGCCCTCAG 58.174 50.000 0.00 0.0 0.00 3.35 R
2257 5788 2.111878 CTGGGCCATCCGTGATCC 59.888 66.667 6.72 0.0 38.76 3.36 R
2851 7294 1.079819 AGACCGCCTTGATGACACG 60.080 57.895 0.00 0.0 0.00 4.49 R
3078 8007 9.821662 GTTTGACTATTCGTTTGCTTTACTTAT 57.178 29.630 0.00 0.0 0.00 1.73 R
3130 10785 3.131933 TCTCTAAGCCTGCAAGTCATCTC 59.868 47.826 0.00 0.0 0.00 2.75 R
3541 11448 1.348696 TGTCAGGAGAAATGCTCAGCA 59.651 47.619 0.00 0.0 45.81 4.41 R
4278 12253 4.122337 TGAGTACCCTGGTAGAAGTTCA 57.878 45.455 5.50 0.0 0.00 3.18 R
4695 12681 2.674177 CGAAGCAAACACCGACCTATCT 60.674 50.000 0.00 0.0 0.00 1.98 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 3.797353 GCCTCTCCGGGAATGGCA 61.797 66.667 25.78 0.00 42.79 4.92
43 44 2.190578 CCTCTCCGGGAATGGCAC 59.809 66.667 0.00 0.00 0.00 5.01
133 149 4.373116 AGGCGCCGCGAAGAAGAA 62.373 61.111 23.20 0.00 0.00 2.52
148 183 2.708325 AGAAGAAGAAGAAGGCCACAGT 59.292 45.455 5.01 0.00 0.00 3.55
196 250 1.221840 CTATGGCCACTGCTTCGGT 59.778 57.895 8.16 0.00 37.74 4.69
235 290 4.817063 CAACAAGCATCGCGGCCG 62.817 66.667 24.05 24.05 0.00 6.13
252 307 0.872021 CCGCCTAGTGCTCGATGAAC 60.872 60.000 0.00 0.00 38.05 3.18
256 311 1.135915 CCTAGTGCTCGATGAACTGCT 59.864 52.381 5.94 0.00 34.82 4.24
258 313 1.436600 AGTGCTCGATGAACTGCTTG 58.563 50.000 0.00 0.00 32.05 4.01
267 322 3.058293 CGATGAACTGCTTGCAAGGTAAA 60.058 43.478 27.10 10.00 0.00 2.01
268 323 3.988379 TGAACTGCTTGCAAGGTAAAG 57.012 42.857 27.10 2.17 0.00 1.85
278 333 5.343325 GCTTGCAAGGTAAAGAAAAATCTCG 59.657 40.000 27.10 0.00 0.00 4.04
330 405 0.110823 GCTTTGTTGTCGTAGTGCGG 60.111 55.000 0.00 0.00 41.72 5.69
332 407 1.455786 CTTTGTTGTCGTAGTGCGGAG 59.544 52.381 0.00 0.00 41.72 4.63
342 417 0.172578 TAGTGCGGAGATGAACACGG 59.827 55.000 0.00 0.00 38.08 4.94
344 419 2.125512 GCGGAGATGAACACGGCT 60.126 61.111 0.00 0.00 34.06 5.52
355 430 1.298859 AACACGGCTGAATTCCTCGC 61.299 55.000 0.00 3.09 0.00 5.03
361 436 0.647925 GCTGAATTCCTCGCGTCTTC 59.352 55.000 5.77 4.13 0.00 2.87
369 444 2.359602 TCGCGTCTTCGGAGTCCT 60.360 61.111 5.77 0.00 37.56 3.85
402 477 3.578282 TGGACTTGATGAGCTCAACTACA 59.422 43.478 22.50 15.18 38.97 2.74
412 487 6.363577 TGAGCTCAACTACAACTTCTTTTG 57.636 37.500 15.67 0.00 0.00 2.44
422 497 4.549458 ACAACTTCTTTTGGCATCATTCG 58.451 39.130 0.00 0.00 0.00 3.34
441 516 3.329542 GAGGCGGCCCAAGACATGA 62.330 63.158 17.02 0.00 0.00 3.07
442 517 2.361104 GGCGGCCCAAGACATGAA 60.361 61.111 8.12 0.00 0.00 2.57
447 522 0.968405 GGCCCAAGACATGAAGCAAA 59.032 50.000 0.00 0.00 31.80 3.68
454 529 1.615392 AGACATGAAGCAAAAGGTGGC 59.385 47.619 0.00 0.00 0.00 5.01
455 530 0.681175 ACATGAAGCAAAAGGTGGCC 59.319 50.000 0.00 0.00 0.00 5.36
456 531 0.680618 CATGAAGCAAAAGGTGGCCA 59.319 50.000 0.00 0.00 0.00 5.36
457 532 1.070445 CATGAAGCAAAAGGTGGCCAA 59.930 47.619 7.24 0.00 0.00 4.52
460 535 0.398381 AAGCAAAAGGTGGCCAAGGA 60.398 50.000 7.24 0.00 0.00 3.36
461 536 0.829182 AGCAAAAGGTGGCCAAGGAG 60.829 55.000 7.24 0.00 0.00 3.69
462 537 1.820010 GCAAAAGGTGGCCAAGGAGG 61.820 60.000 7.24 0.00 41.84 4.30
463 538 0.178964 CAAAAGGTGGCCAAGGAGGA 60.179 55.000 7.24 0.00 41.22 3.71
464 539 0.113190 AAAAGGTGGCCAAGGAGGAG 59.887 55.000 7.24 0.00 41.22 3.69
465 540 1.793820 AAAGGTGGCCAAGGAGGAGG 61.794 60.000 7.24 0.00 41.22 4.30
466 541 2.610859 GGTGGCCAAGGAGGAGGA 60.611 66.667 7.24 0.00 41.22 3.71
467 542 2.674220 GGTGGCCAAGGAGGAGGAG 61.674 68.421 7.24 0.00 41.22 3.69
469 544 2.041265 GGCCAAGGAGGAGGAGGA 59.959 66.667 0.00 0.00 41.22 3.71
471 546 1.704007 GGCCAAGGAGGAGGAGGATG 61.704 65.000 0.00 0.00 41.22 3.51
472 547 1.835693 CCAAGGAGGAGGAGGATGC 59.164 63.158 0.00 0.00 41.22 3.91
474 549 0.984961 CAAGGAGGAGGAGGATGCCA 60.985 60.000 0.00 0.00 0.00 4.92
475 550 0.253347 AAGGAGGAGGAGGATGCCAA 60.253 55.000 0.00 0.00 0.00 4.52
478 553 0.692419 GAGGAGGAGGATGCCAAGGA 60.692 60.000 0.00 0.00 0.00 3.36
480 555 0.182299 GGAGGAGGATGCCAAGGAAG 59.818 60.000 0.00 0.00 0.00 3.46
481 556 1.207791 GAGGAGGATGCCAAGGAAGA 58.792 55.000 0.00 0.00 0.00 2.87
483 558 0.182299 GGAGGATGCCAAGGAAGAGG 59.818 60.000 0.00 0.00 0.00 3.69
485 560 1.140652 GAGGATGCCAAGGAAGAGGAG 59.859 57.143 0.00 0.00 0.00 3.69
486 561 0.182299 GGATGCCAAGGAAGAGGAGG 59.818 60.000 0.00 0.00 0.00 4.30
487 562 0.465278 GATGCCAAGGAAGAGGAGGC 60.465 60.000 0.00 0.00 45.41 4.70
488 563 2.124942 GCCAAGGAAGAGGAGGCG 60.125 66.667 0.00 0.00 35.42 5.52
489 564 2.960688 GCCAAGGAAGAGGAGGCGT 61.961 63.158 0.00 0.00 35.42 5.68
491 566 1.219393 CAAGGAAGAGGAGGCGTCC 59.781 63.158 17.88 17.88 44.33 4.79
506 581 2.042843 TCCGAGGAGGAGGAAGCC 60.043 66.667 0.00 0.00 45.98 4.35
507 582 3.157949 CCGAGGAGGAGGAAGCCC 61.158 72.222 0.00 0.00 45.00 5.19
508 583 2.364317 CGAGGAGGAGGAAGCCCA 60.364 66.667 0.00 0.00 33.88 5.36
509 584 1.990060 CGAGGAGGAGGAAGCCCAA 60.990 63.158 0.00 0.00 33.88 4.12
510 585 1.911471 GAGGAGGAGGAAGCCCAAG 59.089 63.158 0.00 0.00 33.88 3.61
511 586 0.618968 GAGGAGGAGGAAGCCCAAGA 60.619 60.000 0.00 0.00 33.88 3.02
512 587 0.912006 AGGAGGAGGAAGCCCAAGAC 60.912 60.000 0.00 0.00 33.88 3.01
513 588 1.219393 GAGGAGGAAGCCCAAGACG 59.781 63.158 0.00 0.00 33.88 4.18
515 590 2.593956 GGAGGAAGCCCAAGACGGT 61.594 63.158 0.00 0.00 33.88 4.83
517 592 0.611714 GAGGAAGCCCAAGACGGTTA 59.388 55.000 0.00 0.00 33.88 2.85
518 593 1.209747 GAGGAAGCCCAAGACGGTTAT 59.790 52.381 0.00 0.00 33.88 1.89
519 594 1.065418 AGGAAGCCCAAGACGGTTATG 60.065 52.381 0.00 0.00 33.88 1.90
520 595 1.339727 GGAAGCCCAAGACGGTTATGT 60.340 52.381 0.00 0.00 0.00 2.29
522 597 3.433173 GGAAGCCCAAGACGGTTATGTAT 60.433 47.826 0.00 0.00 0.00 2.29
524 599 1.602377 GCCCAAGACGGTTATGTATGC 59.398 52.381 0.00 0.00 0.00 3.14
525 600 2.912771 CCCAAGACGGTTATGTATGCA 58.087 47.619 0.00 0.00 0.00 3.96
526 601 3.476552 CCCAAGACGGTTATGTATGCAT 58.523 45.455 3.79 3.79 39.03 3.96
527 602 3.250762 CCCAAGACGGTTATGTATGCATG 59.749 47.826 10.16 0.00 36.58 4.06
530 605 5.163663 CCAAGACGGTTATGTATGCATGTTT 60.164 40.000 10.16 0.00 36.58 2.83
531 606 6.321717 CAAGACGGTTATGTATGCATGTTTT 58.678 36.000 10.16 0.00 36.58 2.43
532 607 7.414651 CCAAGACGGTTATGTATGCATGTTTTA 60.415 37.037 10.16 0.00 36.58 1.52
534 609 8.046294 AGACGGTTATGTATGCATGTTTTAAA 57.954 30.769 10.16 0.00 36.58 1.52
535 610 8.682710 AGACGGTTATGTATGCATGTTTTAAAT 58.317 29.630 10.16 0.00 36.58 1.40
536 611 9.296400 GACGGTTATGTATGCATGTTTTAAATT 57.704 29.630 10.16 0.00 36.58 1.82
537 612 9.646427 ACGGTTATGTATGCATGTTTTAAATTT 57.354 25.926 10.16 0.00 36.58 1.82
580 655 7.807977 ATTGTGTAGAGTTTGAAGTTGATGT 57.192 32.000 0.00 0.00 0.00 3.06
589 664 3.695830 TGAAGTTGATGTGGGTAGGAC 57.304 47.619 0.00 0.00 0.00 3.85
590 665 2.976185 TGAAGTTGATGTGGGTAGGACA 59.024 45.455 0.00 0.00 0.00 4.02
591 666 3.587061 TGAAGTTGATGTGGGTAGGACAT 59.413 43.478 0.00 0.00 36.73 3.06
595 670 6.134535 AGTTGATGTGGGTAGGACATAAAA 57.865 37.500 0.00 0.00 34.10 1.52
596 671 6.731467 AGTTGATGTGGGTAGGACATAAAAT 58.269 36.000 0.00 0.00 34.10 1.82
597 672 6.828785 AGTTGATGTGGGTAGGACATAAAATC 59.171 38.462 0.00 0.00 34.10 2.17
598 673 6.320434 TGATGTGGGTAGGACATAAAATCA 57.680 37.500 0.00 0.00 34.10 2.57
599 674 6.726379 TGATGTGGGTAGGACATAAAATCAA 58.274 36.000 0.00 0.00 34.10 2.57
601 676 5.882040 TGTGGGTAGGACATAAAATCAACA 58.118 37.500 0.00 0.00 0.00 3.33
602 677 6.489603 TGTGGGTAGGACATAAAATCAACAT 58.510 36.000 0.00 0.00 0.00 2.71
604 679 8.110271 TGTGGGTAGGACATAAAATCAACATAA 58.890 33.333 0.00 0.00 0.00 1.90
605 680 9.131791 GTGGGTAGGACATAAAATCAACATAAT 57.868 33.333 0.00 0.00 0.00 1.28
606 681 9.707957 TGGGTAGGACATAAAATCAACATAATT 57.292 29.630 0.00 0.00 0.00 1.40
625 700 9.040939 ACATAATTTTGGTTTTTACTTCACTGC 57.959 29.630 0.89 0.00 0.00 4.40
627 702 7.538303 AATTTTGGTTTTTACTTCACTGCTG 57.462 32.000 0.00 0.00 0.00 4.41
628 703 5.652994 TTTGGTTTTTACTTCACTGCTGT 57.347 34.783 0.00 0.00 0.00 4.40
629 704 6.761099 TTTGGTTTTTACTTCACTGCTGTA 57.239 33.333 0.00 0.00 0.00 2.74
630 705 6.371809 TTGGTTTTTACTTCACTGCTGTAG 57.628 37.500 0.00 0.00 0.00 2.74
631 706 5.676552 TGGTTTTTACTTCACTGCTGTAGA 58.323 37.500 0.00 0.00 0.00 2.59
632 707 5.758296 TGGTTTTTACTTCACTGCTGTAGAG 59.242 40.000 0.00 0.15 0.00 2.43
633 708 5.179555 GGTTTTTACTTCACTGCTGTAGAGG 59.820 44.000 0.00 0.47 0.00 3.69
635 710 6.360370 TTTTACTTCACTGCTGTAGAGGAT 57.640 37.500 0.00 0.00 0.00 3.24
637 712 2.425312 ACTTCACTGCTGTAGAGGATCG 59.575 50.000 0.00 0.00 42.67 3.69
638 713 1.393603 TCACTGCTGTAGAGGATCGG 58.606 55.000 0.00 0.00 42.67 4.18
639 714 0.249238 CACTGCTGTAGAGGATCGGC 60.249 60.000 0.00 0.00 42.67 5.54
645 720 1.883275 CTGTAGAGGATCGGCTAGGTG 59.117 57.143 0.00 0.00 42.67 4.00
646 721 0.599060 GTAGAGGATCGGCTAGGTGC 59.401 60.000 0.00 0.00 42.67 5.01
647 722 0.889638 TAGAGGATCGGCTAGGTGCG 60.890 60.000 0.00 0.00 42.67 5.34
648 723 3.214250 GAGGATCGGCTAGGTGCGG 62.214 68.421 0.00 0.00 44.05 5.69
649 724 4.971125 GGATCGGCTAGGTGCGGC 62.971 72.222 0.00 0.00 44.05 6.53
650 725 4.971125 GATCGGCTAGGTGCGGCC 62.971 72.222 0.00 0.00 44.05 6.13
678 753 9.632807 CCGTTAGTGAAATAAAAATTCATTCCA 57.367 29.630 0.00 0.00 38.89 3.53
689 764 7.839680 AAAAATTCATTCCACTAACTCCACT 57.160 32.000 0.00 0.00 0.00 4.00
690 765 6.824305 AAATTCATTCCACTAACTCCACTG 57.176 37.500 0.00 0.00 0.00 3.66
691 766 3.981071 TCATTCCACTAACTCCACTGG 57.019 47.619 0.00 0.00 0.00 4.00
693 768 1.358152 TTCCACTAACTCCACTGGGG 58.642 55.000 0.00 0.00 38.37 4.96
694 769 0.490017 TCCACTAACTCCACTGGGGA 59.510 55.000 0.42 0.00 45.89 4.81
710 785 5.275067 CTGGGGATCAGTTAGAAAGAGAG 57.725 47.826 0.00 0.00 38.64 3.20
712 787 5.533112 TGGGGATCAGTTAGAAAGAGAGAT 58.467 41.667 0.00 0.00 0.00 2.75
713 788 5.365025 TGGGGATCAGTTAGAAAGAGAGATG 59.635 44.000 0.00 0.00 0.00 2.90
714 789 5.296748 GGGATCAGTTAGAAAGAGAGATGC 58.703 45.833 0.00 0.00 0.00 3.91
715 790 5.070313 GGGATCAGTTAGAAAGAGAGATGCT 59.930 44.000 0.00 0.00 0.00 3.79
716 791 6.266558 GGGATCAGTTAGAAAGAGAGATGCTA 59.733 42.308 0.00 0.00 0.00 3.49
717 792 7.370383 GGATCAGTTAGAAAGAGAGATGCTAG 58.630 42.308 0.00 0.00 0.00 3.42
719 794 7.328277 TCAGTTAGAAAGAGAGATGCTAGAC 57.672 40.000 0.00 0.00 0.00 2.59
720 795 7.116075 TCAGTTAGAAAGAGAGATGCTAGACT 58.884 38.462 0.00 0.00 0.00 3.24
721 796 7.066887 TCAGTTAGAAAGAGAGATGCTAGACTG 59.933 40.741 0.00 0.00 0.00 3.51
723 798 5.835113 AGAAAGAGAGATGCTAGACTGAC 57.165 43.478 0.00 0.00 0.00 3.51
724 799 4.335315 AGAAAGAGAGATGCTAGACTGACG 59.665 45.833 0.00 0.00 0.00 4.35
725 800 3.275617 AGAGAGATGCTAGACTGACGT 57.724 47.619 0.00 0.00 0.00 4.34
726 801 2.942376 AGAGAGATGCTAGACTGACGTG 59.058 50.000 0.00 0.00 0.00 4.49
728 803 0.457851 AGATGCTAGACTGACGTGCC 59.542 55.000 0.00 0.00 0.00 5.01
729 804 0.528684 GATGCTAGACTGACGTGCCC 60.529 60.000 0.00 0.00 0.00 5.36
731 806 1.185618 TGCTAGACTGACGTGCCCTT 61.186 55.000 0.00 0.00 0.00 3.95
732 807 0.037232 GCTAGACTGACGTGCCCTTT 60.037 55.000 0.00 0.00 0.00 3.11
733 808 1.203994 GCTAGACTGACGTGCCCTTTA 59.796 52.381 0.00 0.00 0.00 1.85
735 810 0.038526 AGACTGACGTGCCCTTTACG 60.039 55.000 0.00 0.00 46.31 3.18
736 811 1.005394 ACTGACGTGCCCTTTACGG 60.005 57.895 0.00 0.00 45.24 4.02
749 824 3.297736 CCTTTACGGGGATCTACTGAGT 58.702 50.000 0.00 0.00 0.00 3.41
751 826 3.657398 TTACGGGGATCTACTGAGTGA 57.343 47.619 0.00 0.00 0.00 3.41
752 827 2.757894 ACGGGGATCTACTGAGTGAT 57.242 50.000 0.00 0.00 0.00 3.06
753 828 3.033659 ACGGGGATCTACTGAGTGATT 57.966 47.619 0.00 0.00 0.00 2.57
755 830 4.145807 ACGGGGATCTACTGAGTGATTAG 58.854 47.826 0.00 0.00 0.00 1.73
756 831 3.508012 CGGGGATCTACTGAGTGATTAGG 59.492 52.174 0.00 0.00 0.00 2.69
757 832 4.742012 GGGGATCTACTGAGTGATTAGGA 58.258 47.826 0.00 0.00 0.00 2.94
758 833 4.525100 GGGGATCTACTGAGTGATTAGGAC 59.475 50.000 0.00 0.00 0.00 3.85
759 834 4.525100 GGGATCTACTGAGTGATTAGGACC 59.475 50.000 0.00 0.00 0.00 4.46
760 835 5.390387 GGATCTACTGAGTGATTAGGACCT 58.610 45.833 0.00 0.00 0.00 3.85
762 837 5.452341 TCTACTGAGTGATTAGGACCTGA 57.548 43.478 3.53 0.00 0.00 3.86
764 839 6.436027 TCTACTGAGTGATTAGGACCTGATT 58.564 40.000 3.53 0.00 0.00 2.57
765 840 5.350504 ACTGAGTGATTAGGACCTGATTG 57.649 43.478 3.53 0.00 0.00 2.67
766 841 4.163078 ACTGAGTGATTAGGACCTGATTGG 59.837 45.833 3.53 0.00 42.93 3.16
767 842 3.118261 TGAGTGATTAGGACCTGATTGGC 60.118 47.826 3.53 0.00 40.22 4.52
768 843 3.118531 AGTGATTAGGACCTGATTGGCT 58.881 45.455 3.53 0.00 40.22 4.75
769 844 3.118112 AGTGATTAGGACCTGATTGGCTG 60.118 47.826 3.53 0.00 40.22 4.85
770 845 2.173356 TGATTAGGACCTGATTGGCTGG 59.827 50.000 3.53 0.00 40.22 4.85
772 847 1.965414 TAGGACCTGATTGGCTGGAA 58.035 50.000 3.53 0.00 40.22 3.53
773 848 1.302907 AGGACCTGATTGGCTGGAAT 58.697 50.000 0.00 0.00 40.22 3.01
776 851 2.621407 GGACCTGATTGGCTGGAATTGA 60.621 50.000 0.00 0.00 40.22 2.57
778 853 3.703052 GACCTGATTGGCTGGAATTGAAT 59.297 43.478 0.00 0.00 40.22 2.57
779 854 4.098894 ACCTGATTGGCTGGAATTGAATT 58.901 39.130 0.00 0.00 40.22 2.17
780 855 5.271598 ACCTGATTGGCTGGAATTGAATTA 58.728 37.500 0.00 0.00 40.22 1.40
781 856 5.721000 ACCTGATTGGCTGGAATTGAATTAA 59.279 36.000 0.00 0.00 40.22 1.40
782 857 6.127253 ACCTGATTGGCTGGAATTGAATTAAG 60.127 38.462 0.00 0.00 40.22 1.85
783 858 6.127253 CCTGATTGGCTGGAATTGAATTAAGT 60.127 38.462 0.00 0.00 37.79 2.24
784 859 6.632909 TGATTGGCTGGAATTGAATTAAGTG 58.367 36.000 0.00 0.00 0.00 3.16
786 861 5.902613 TGGCTGGAATTGAATTAAGTGAG 57.097 39.130 0.00 0.00 0.00 3.51
787 862 5.569355 TGGCTGGAATTGAATTAAGTGAGA 58.431 37.500 0.00 0.00 0.00 3.27
790 865 7.500227 TGGCTGGAATTGAATTAAGTGAGATAG 59.500 37.037 0.00 0.00 0.00 2.08
791 866 7.040823 GGCTGGAATTGAATTAAGTGAGATAGG 60.041 40.741 0.00 0.00 0.00 2.57
792 867 7.521261 GCTGGAATTGAATTAAGTGAGATAGGC 60.521 40.741 0.00 0.00 0.00 3.93
793 868 6.772716 TGGAATTGAATTAAGTGAGATAGGCC 59.227 38.462 0.00 0.00 0.00 5.19
794 869 6.207614 GGAATTGAATTAAGTGAGATAGGCCC 59.792 42.308 0.00 0.00 0.00 5.80
796 871 5.036117 TGAATTAAGTGAGATAGGCCCAC 57.964 43.478 0.00 0.00 0.00 4.61
798 873 2.561209 TAAGTGAGATAGGCCCACCA 57.439 50.000 0.00 0.00 39.06 4.17
799 874 1.207791 AAGTGAGATAGGCCCACCAG 58.792 55.000 0.00 0.00 39.06 4.00
800 875 0.043334 AGTGAGATAGGCCCACCAGT 59.957 55.000 0.00 0.00 39.06 4.00
801 876 1.291033 AGTGAGATAGGCCCACCAGTA 59.709 52.381 0.00 0.00 39.06 2.74
802 877 2.116238 GTGAGATAGGCCCACCAGTAA 58.884 52.381 0.00 0.00 39.06 2.24
804 879 3.054655 GTGAGATAGGCCCACCAGTAAAA 60.055 47.826 0.00 0.00 39.06 1.52
805 880 3.589735 TGAGATAGGCCCACCAGTAAAAA 59.410 43.478 0.00 0.00 39.06 1.94
806 881 4.229582 TGAGATAGGCCCACCAGTAAAAAT 59.770 41.667 0.00 0.00 39.06 1.82
807 882 4.793201 AGATAGGCCCACCAGTAAAAATC 58.207 43.478 0.00 0.00 39.06 2.17
808 883 2.990740 AGGCCCACCAGTAAAAATCA 57.009 45.000 0.00 0.00 39.06 2.57
809 884 2.807676 AGGCCCACCAGTAAAAATCAG 58.192 47.619 0.00 0.00 39.06 2.90
810 885 1.824852 GGCCCACCAGTAAAAATCAGG 59.175 52.381 0.00 0.00 35.26 3.86
811 886 1.824852 GCCCACCAGTAAAAATCAGGG 59.175 52.381 0.00 0.00 38.10 4.45
812 887 2.456577 CCCACCAGTAAAAATCAGGGG 58.543 52.381 0.00 0.00 0.00 4.79
813 888 2.456577 CCACCAGTAAAAATCAGGGGG 58.543 52.381 0.00 0.00 36.42 5.40
815 890 1.273041 ACCAGTAAAAATCAGGGGGCC 60.273 52.381 0.00 0.00 0.00 5.80
816 891 1.485124 CAGTAAAAATCAGGGGGCCC 58.515 55.000 15.76 15.76 0.00 5.80
817 892 1.089123 AGTAAAAATCAGGGGGCCCA 58.911 50.000 26.86 3.62 38.92 5.36
818 893 1.435168 AGTAAAAATCAGGGGGCCCAA 59.565 47.619 26.86 9.72 38.92 4.12
819 894 2.045745 AGTAAAAATCAGGGGGCCCAAT 59.954 45.455 26.86 11.87 38.92 3.16
820 895 2.058251 AAAAATCAGGGGGCCCAATT 57.942 45.000 26.86 17.37 38.92 2.32
821 896 2.959421 AAAATCAGGGGGCCCAATTA 57.041 45.000 26.86 6.32 38.92 1.40
826 901 0.852842 CAGGGGGCCCAATTAGATGA 59.147 55.000 26.86 0.00 38.92 2.92
827 902 1.152649 AGGGGGCCCAATTAGATGAG 58.847 55.000 26.86 0.00 38.92 2.90
828 903 0.113190 GGGGGCCCAATTAGATGAGG 59.887 60.000 26.86 0.00 35.81 3.86
830 905 1.202940 GGGGCCCAATTAGATGAGGAC 60.203 57.143 26.86 0.00 0.00 3.85
831 906 1.494721 GGGCCCAATTAGATGAGGACA 59.505 52.381 19.95 0.00 0.00 4.02
832 907 2.576615 GGCCCAATTAGATGAGGACAC 58.423 52.381 0.00 0.00 0.00 3.67
834 909 2.420129 GCCCAATTAGATGAGGACACGT 60.420 50.000 0.00 0.00 0.00 4.49
835 910 3.181469 GCCCAATTAGATGAGGACACGTA 60.181 47.826 0.00 0.00 0.00 3.57
836 911 4.621991 CCCAATTAGATGAGGACACGTAG 58.378 47.826 0.00 0.00 0.00 3.51
837 912 4.501571 CCCAATTAGATGAGGACACGTAGG 60.502 50.000 0.00 0.00 0.00 3.18
838 913 4.341235 CCAATTAGATGAGGACACGTAGGA 59.659 45.833 0.00 0.00 0.00 2.94
839 914 5.163447 CCAATTAGATGAGGACACGTAGGAA 60.163 44.000 0.00 0.00 0.00 3.36
840 915 5.776173 ATTAGATGAGGACACGTAGGAAG 57.224 43.478 0.00 0.00 0.00 3.46
841 916 2.379972 AGATGAGGACACGTAGGAAGG 58.620 52.381 0.00 0.00 0.00 3.46
843 918 1.542492 TGAGGACACGTAGGAAGGTC 58.458 55.000 0.00 0.00 0.00 3.85
844 919 1.202964 TGAGGACACGTAGGAAGGTCA 60.203 52.381 4.17 0.00 32.00 4.02
846 921 0.108756 GGACACGTAGGAAGGTCAGC 60.109 60.000 4.17 0.00 32.00 4.26
847 922 0.456312 GACACGTAGGAAGGTCAGCG 60.456 60.000 0.00 0.00 0.00 5.18
848 923 1.153823 CACGTAGGAAGGTCAGCGG 60.154 63.158 0.00 0.00 0.00 5.52
849 924 1.303888 ACGTAGGAAGGTCAGCGGA 60.304 57.895 0.00 0.00 0.00 5.54
851 926 1.313812 CGTAGGAAGGTCAGCGGAGT 61.314 60.000 0.00 0.00 0.00 3.85
852 927 0.456628 GTAGGAAGGTCAGCGGAGTC 59.543 60.000 0.00 0.00 0.00 3.36
853 928 0.683504 TAGGAAGGTCAGCGGAGTCC 60.684 60.000 0.00 0.00 0.00 3.85
865 940 2.520686 CGGAGTCCGTTGTTTATTGC 57.479 50.000 23.83 0.00 42.73 3.56
867 942 1.465187 GGAGTCCGTTGTTTATTGCGC 60.465 52.381 0.00 0.00 0.00 6.09
868 943 0.165079 AGTCCGTTGTTTATTGCGCG 59.835 50.000 0.00 0.00 0.00 6.86
869 944 1.154376 TCCGTTGTTTATTGCGCGC 60.154 52.632 27.26 27.26 0.00 6.86
870 945 2.484681 CCGTTGTTTATTGCGCGCG 61.485 57.895 28.44 28.44 0.00 6.86
872 947 1.688296 GTTGTTTATTGCGCGCGTG 59.312 52.632 32.35 16.86 0.00 5.34
873 948 0.994737 GTTGTTTATTGCGCGCGTGT 60.995 50.000 32.35 19.25 0.00 4.49
874 949 0.994241 TTGTTTATTGCGCGCGTGTG 60.994 50.000 32.35 4.87 0.00 3.82
875 950 1.439693 GTTTATTGCGCGCGTGTGT 60.440 52.632 32.35 17.05 0.00 3.72
877 952 0.093875 TTTATTGCGCGCGTGTGTAG 59.906 50.000 32.35 0.92 0.00 2.74
879 954 0.179169 TATTGCGCGCGTGTGTAGTA 60.179 50.000 32.35 11.77 0.00 1.82
880 955 0.804544 ATTGCGCGCGTGTGTAGTAT 60.805 50.000 32.35 10.06 0.00 2.12
881 956 1.009903 TTGCGCGCGTGTGTAGTATT 61.010 50.000 32.35 0.00 0.00 1.89
882 957 0.179169 TGCGCGCGTGTGTAGTATTA 60.179 50.000 32.35 0.00 0.00 0.98
884 959 1.121967 GCGCGCGTGTGTAGTATTATC 59.878 52.381 32.35 4.98 0.00 1.75
885 960 1.377830 CGCGCGTGTGTAGTATTATCG 59.622 52.381 24.19 0.00 0.00 2.92
888 963 3.847467 GCGCGTGTGTAGTATTATCGAGT 60.847 47.826 8.43 0.00 0.00 4.18
889 964 4.277258 CGCGTGTGTAGTATTATCGAGTT 58.723 43.478 0.00 0.00 0.00 3.01
890 965 5.434706 CGCGTGTGTAGTATTATCGAGTTA 58.565 41.667 0.00 0.00 0.00 2.24
891 966 5.559260 CGCGTGTGTAGTATTATCGAGTTAG 59.441 44.000 0.00 0.00 0.00 2.34
894 969 7.641411 GCGTGTGTAGTATTATCGAGTTAGAAA 59.359 37.037 0.00 0.00 0.00 2.52
895 970 9.661187 CGTGTGTAGTATTATCGAGTTAGAAAT 57.339 33.333 0.00 0.00 0.00 2.17
966 1050 1.068083 CCACACGAGCACAGTGACT 59.932 57.895 4.15 0.45 41.83 3.41
977 1061 3.805307 AGTGACTCGAGCGAGCGG 61.805 66.667 18.80 0.00 45.54 5.52
978 1062 4.838486 GTGACTCGAGCGAGCGGG 62.838 72.222 18.80 0.00 45.54 6.13
1027 1119 1.587043 CTCTTCGTCGCTCCCTGTGA 61.587 60.000 0.00 0.00 0.00 3.58
1056 1154 2.103934 CTGCTCTTCCTCCTCGCG 59.896 66.667 0.00 0.00 0.00 5.87
1236 1343 2.248431 GACAACAGCACGGCGAAC 59.752 61.111 16.62 4.57 0.00 3.95
1486 1593 3.095912 TCATCGAGGTACCCTTTCTGA 57.904 47.619 8.74 3.01 31.76 3.27
1488 1595 2.297698 TCGAGGTACCCTTTCTGACA 57.702 50.000 8.74 0.00 31.76 3.58
1489 1596 1.891150 TCGAGGTACCCTTTCTGACAC 59.109 52.381 8.74 0.00 31.76 3.67
1490 1597 1.402456 CGAGGTACCCTTTCTGACACG 60.402 57.143 8.74 0.00 31.76 4.49
1507 1614 2.490903 ACACGTACATATATCCTCCGCC 59.509 50.000 0.00 0.00 0.00 6.13
1543 1651 4.394712 GACCACTGACCGCCCCTG 62.395 72.222 0.00 0.00 0.00 4.45
1570 1678 7.013834 TCCAAAATTTAGTTGTCCTATTGGGT 58.986 34.615 0.00 0.00 34.72 4.51
1571 1679 7.511028 TCCAAAATTTAGTTGTCCTATTGGGTT 59.489 33.333 0.00 0.00 34.72 4.11
1574 1682 6.850752 ATTTAGTTGTCCTATTGGGTTTGG 57.149 37.500 0.00 0.00 36.25 3.28
1575 1683 3.169512 AGTTGTCCTATTGGGTTTGGG 57.830 47.619 0.00 0.00 36.25 4.12
1589 1697 2.290134 GGTTTGGGTCCCTCTAGACAAC 60.290 54.545 10.00 1.11 38.59 3.32
1604 1712 1.267806 GACAACACACCATTGAGCAGG 59.732 52.381 0.00 0.00 0.00 4.85
1663 1782 8.565896 AATCAGTAACAGCAATCACTTTCATA 57.434 30.769 0.00 0.00 0.00 2.15
1728 4442 4.143333 AGTCGATGCCGTTCGGGG 62.143 66.667 13.16 0.00 39.56 5.73
1898 4618 3.690280 TCCATCACCAGCGCGTCA 61.690 61.111 8.43 0.00 0.00 4.35
1924 4695 3.924073 TGTATTATATCATGCGTGCGACC 59.076 43.478 0.00 0.00 0.00 4.79
1942 4716 0.811281 CCTGAGGGCGGACAATTTTC 59.189 55.000 0.00 0.00 0.00 2.29
2049 5574 1.888512 GCTTCATGGTTCAGGCTCAAA 59.111 47.619 0.00 0.00 0.00 2.69
2188 5717 6.599356 TGGAAATTAGTCACTACTACTGCA 57.401 37.500 0.00 0.00 37.94 4.41
2257 5788 4.782019 TGGTCAAAAGAATTTCGGGATG 57.218 40.909 0.00 0.00 37.28 3.51
2259 5790 3.761752 GGTCAAAAGAATTTCGGGATGGA 59.238 43.478 0.00 0.00 37.28 3.41
2523 6858 2.679837 AGTGCGTGATTGAAATGGCTAG 59.320 45.455 0.00 0.00 0.00 3.42
2559 6950 9.630098 GATTCAGTTTTTGATTAGCTTGATTGA 57.370 29.630 0.00 0.00 35.27 2.57
2639 7043 5.945191 TCCTCACTTGTATGCAAATTGATGA 59.055 36.000 0.00 7.80 33.73 2.92
2678 7091 4.063998 TGCCTGATGACAGCTATTACTG 57.936 45.455 0.00 0.00 42.25 2.74
2725 7138 2.028020 GGGAAAGGAACGATGAGTCACT 60.028 50.000 0.00 0.00 0.00 3.41
2726 7139 3.557264 GGGAAAGGAACGATGAGTCACTT 60.557 47.826 0.00 0.00 32.43 3.16
2761 7174 5.618056 TCTTTGTCTGATTGATGCTTGAC 57.382 39.130 0.00 0.00 0.00 3.18
2851 7294 2.015587 CTGAGAGCCTGAATTGCTTCC 58.984 52.381 0.00 0.00 39.69 3.46
2967 7449 9.515226 AAGTAAGCTTTGTCCAACTGATAATTA 57.485 29.630 3.20 0.00 0.00 1.40
3093 8022 7.569297 TGTGTGAAGTATAAGTAAAGCAAACG 58.431 34.615 0.00 0.00 0.00 3.60
3176 10859 9.614792 AGAATGTACATTAAGTCCAAAGGATAC 57.385 33.333 20.83 3.24 32.73 2.24
3309 11000 2.545106 GGGTTCGTGACGTTGTGTTATT 59.455 45.455 4.40 0.00 0.00 1.40
3460 11151 2.224523 TGAAGGAGGTTAGCCACTTGTG 60.225 50.000 9.70 0.00 35.38 3.33
3473 11324 4.161754 AGCCACTTGTGACCTACCTTATAC 59.838 45.833 1.89 0.00 0.00 1.47
3539 11446 4.763279 CCGTGGACCTGTTTTTATTACCTT 59.237 41.667 0.00 0.00 0.00 3.50
3540 11447 5.106436 CCGTGGACCTGTTTTTATTACCTTC 60.106 44.000 0.00 0.00 0.00 3.46
3541 11448 5.704053 CGTGGACCTGTTTTTATTACCTTCT 59.296 40.000 0.00 0.00 0.00 2.85
3765 11680 4.665833 ATACGTGTGTATGTGGCATACT 57.334 40.909 16.93 3.16 39.81 2.12
3766 11681 2.616960 ACGTGTGTATGTGGCATACTG 58.383 47.619 16.93 9.08 0.00 2.74
3767 11682 2.232696 ACGTGTGTATGTGGCATACTGA 59.767 45.455 16.93 4.53 0.00 3.41
3768 11683 3.118775 ACGTGTGTATGTGGCATACTGAT 60.119 43.478 16.93 0.82 0.00 2.90
3769 11684 4.098807 ACGTGTGTATGTGGCATACTGATA 59.901 41.667 16.93 0.00 0.00 2.15
4340 12318 2.839486 TTGCTCTTGTGACGGAGAAT 57.161 45.000 9.06 0.00 0.00 2.40
4572 12555 3.515502 ACAGATGTAGCAGTAAGAAGGCA 59.484 43.478 0.00 0.00 0.00 4.75
4586 12569 5.549742 AAGAAGGCACCATTGATTTTCAA 57.450 34.783 0.00 0.00 41.09 2.69
4740 12726 9.391006 TCGTTAGTGGCAGAGATTAAATATTTT 57.609 29.630 5.91 0.00 0.00 1.82
4855 13031 2.997315 TGGCTCTCTGGTCCACCG 60.997 66.667 0.00 0.00 39.43 4.94
4859 13035 1.255667 GCTCTCTGGTCCACCGGTAA 61.256 60.000 6.87 0.00 43.01 2.85
4899 14902 8.810427 CAAAGTTGATTGTAATCATGGTATTGC 58.190 33.333 8.02 0.00 44.27 3.56
5000 15190 9.696917 AAATTCAACAAGACACCATAAATTCTC 57.303 29.630 0.00 0.00 0.00 2.87
5120 15314 6.280643 ACTTGTCCCTGCAGAAAATTTTAAC 58.719 36.000 17.39 0.00 0.00 2.01
5132 15326 2.058913 ATTTTAACGCACGGCTTTGG 57.941 45.000 0.00 0.00 0.00 3.28
5229 15425 2.682269 GCATCTCAGGGAAAGAAGGGAC 60.682 54.545 0.00 0.00 0.00 4.46
5253 15449 5.903764 TTGCATTGAAAACAAGTACATGC 57.096 34.783 0.00 0.25 0.00 4.06
5388 17283 1.630878 AGTCCCAAACCCTGCTTCTAG 59.369 52.381 0.00 0.00 0.00 2.43
5392 17287 3.653836 TCCCAAACCCTGCTTCTAGTTAA 59.346 43.478 0.00 0.00 0.00 2.01
5502 17397 6.939132 ACATGAAATCATCCTCAGATTGAC 57.061 37.500 0.00 0.00 35.96 3.18
5509 17404 2.996249 TCCTCAGATTGACATCCTGC 57.004 50.000 0.00 0.00 0.00 4.85
5528 17423 3.371168 TGCAACGCAAAGAAGTTTGATC 58.629 40.909 2.05 0.00 45.22 2.92
5550 17445 5.204292 TCTAGATACAACTGACCAGCTCAT 58.796 41.667 0.00 0.00 0.00 2.90
5551 17446 4.833478 AGATACAACTGACCAGCTCATT 57.167 40.909 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
123 135 1.735018 GGCCTTCTTCTTCTTCTTCGC 59.265 52.381 0.00 0.00 0.00 4.70
215 270 4.817063 CCGCGATGCTTGTTGCCG 62.817 66.667 8.23 0.00 42.00 5.69
235 290 1.565305 CAGTTCATCGAGCACTAGGC 58.435 55.000 0.00 0.00 45.30 3.93
252 307 6.218746 AGATTTTTCTTTACCTTGCAAGCAG 58.781 36.000 21.43 10.93 0.00 4.24
256 311 5.219633 GCGAGATTTTTCTTTACCTTGCAA 58.780 37.500 0.00 0.00 32.76 4.08
258 313 4.794169 TGCGAGATTTTTCTTTACCTTGC 58.206 39.130 0.00 0.00 0.00 4.01
267 322 4.520492 ACCAACAAGATGCGAGATTTTTCT 59.480 37.500 0.00 0.00 0.00 2.52
268 323 4.618489 CACCAACAAGATGCGAGATTTTTC 59.382 41.667 0.00 0.00 0.00 2.29
278 333 1.315257 ATCGGCCACCAACAAGATGC 61.315 55.000 2.24 0.00 0.00 3.91
330 405 2.352960 GGAATTCAGCCGTGTTCATCTC 59.647 50.000 7.93 0.00 0.00 2.75
332 407 2.352960 GAGGAATTCAGCCGTGTTCATC 59.647 50.000 7.93 0.00 0.00 2.92
342 417 0.647925 GAAGACGCGAGGAATTCAGC 59.352 55.000 15.93 8.57 0.00 4.26
344 419 0.457853 CCGAAGACGCGAGGAATTCA 60.458 55.000 15.93 0.00 38.29 2.57
355 430 2.792599 CCGAGGACTCCGAAGACG 59.207 66.667 0.00 0.00 39.43 4.18
402 477 3.826157 TCCGAATGATGCCAAAAGAAGTT 59.174 39.130 0.00 0.00 0.00 2.66
412 487 2.974698 CCGCCTCCGAATGATGCC 60.975 66.667 0.00 0.00 36.29 4.40
422 497 4.115199 ATGTCTTGGGCCGCCTCC 62.115 66.667 9.86 0.00 0.00 4.30
441 516 0.398381 TCCTTGGCCACCTTTTGCTT 60.398 50.000 3.88 0.00 0.00 3.91
442 517 0.829182 CTCCTTGGCCACCTTTTGCT 60.829 55.000 3.88 0.00 0.00 3.91
447 522 2.234296 CCTCCTCCTTGGCCACCTT 61.234 63.158 3.88 0.00 35.26 3.50
454 529 1.704007 GGCATCCTCCTCCTCCTTGG 61.704 65.000 0.00 0.00 37.10 3.61
455 530 0.984961 TGGCATCCTCCTCCTCCTTG 60.985 60.000 0.00 0.00 0.00 3.61
456 531 0.253347 TTGGCATCCTCCTCCTCCTT 60.253 55.000 0.00 0.00 0.00 3.36
457 532 0.693767 CTTGGCATCCTCCTCCTCCT 60.694 60.000 0.00 0.00 0.00 3.69
460 535 0.253347 TTCCTTGGCATCCTCCTCCT 60.253 55.000 0.00 0.00 0.00 3.69
461 536 0.182299 CTTCCTTGGCATCCTCCTCC 59.818 60.000 0.00 0.00 0.00 4.30
462 537 1.140652 CTCTTCCTTGGCATCCTCCTC 59.859 57.143 0.00 0.00 0.00 3.71
463 538 1.211456 CTCTTCCTTGGCATCCTCCT 58.789 55.000 0.00 0.00 0.00 3.69
464 539 0.182299 CCTCTTCCTTGGCATCCTCC 59.818 60.000 0.00 0.00 0.00 4.30
465 540 1.140652 CTCCTCTTCCTTGGCATCCTC 59.859 57.143 0.00 0.00 0.00 3.71
466 541 1.211456 CTCCTCTTCCTTGGCATCCT 58.789 55.000 0.00 0.00 0.00 3.24
467 542 0.182299 CCTCCTCTTCCTTGGCATCC 59.818 60.000 0.00 0.00 0.00 3.51
469 544 1.611965 GCCTCCTCTTCCTTGGCAT 59.388 57.895 0.00 0.00 42.79 4.40
471 546 2.124942 CGCCTCCTCTTCCTTGGC 60.125 66.667 0.00 0.00 40.14 4.52
472 547 1.219393 GACGCCTCCTCTTCCTTGG 59.781 63.158 0.00 0.00 0.00 3.61
474 549 2.352032 CGGACGCCTCCTCTTCCTT 61.352 63.158 0.07 0.00 33.79 3.36
475 550 2.756283 CGGACGCCTCCTCTTCCT 60.756 66.667 0.07 0.00 33.79 3.36
478 553 2.756283 CCTCGGACGCCTCCTCTT 60.756 66.667 0.07 0.00 33.79 2.85
480 555 3.213402 CTCCTCGGACGCCTCCTC 61.213 72.222 0.07 0.00 33.79 3.71
481 556 4.824515 CCTCCTCGGACGCCTCCT 62.825 72.222 0.07 0.00 33.79 3.69
483 558 3.213402 CTCCTCCTCGGACGCCTC 61.213 72.222 0.00 0.00 36.69 4.70
485 560 4.816984 TCCTCCTCCTCGGACGCC 62.817 72.222 0.00 0.00 36.69 5.68
486 561 2.754658 TTCCTCCTCCTCGGACGC 60.755 66.667 0.00 0.00 36.69 5.19
487 562 2.776913 GCTTCCTCCTCCTCGGACG 61.777 68.421 0.00 0.00 36.69 4.79
488 563 2.428085 GGCTTCCTCCTCCTCGGAC 61.428 68.421 0.00 0.00 36.69 4.79
489 564 2.042843 GGCTTCCTCCTCCTCGGA 60.043 66.667 0.00 0.00 40.30 4.55
491 566 1.965754 CTTGGGCTTCCTCCTCCTCG 61.966 65.000 0.00 0.00 0.00 4.63
492 567 0.618968 TCTTGGGCTTCCTCCTCCTC 60.619 60.000 0.00 0.00 0.00 3.71
493 568 0.912006 GTCTTGGGCTTCCTCCTCCT 60.912 60.000 0.00 0.00 0.00 3.69
494 569 1.604915 GTCTTGGGCTTCCTCCTCC 59.395 63.158 0.00 0.00 0.00 4.30
495 570 1.219393 CGTCTTGGGCTTCCTCCTC 59.781 63.158 0.00 0.00 0.00 3.71
497 572 2.125766 AACCGTCTTGGGCTTCCTCC 62.126 60.000 0.00 0.00 44.64 4.30
498 573 0.611714 TAACCGTCTTGGGCTTCCTC 59.388 55.000 0.00 0.00 44.64 3.71
500 575 1.339727 ACATAACCGTCTTGGGCTTCC 60.340 52.381 0.00 0.00 44.64 3.46
501 576 2.109425 ACATAACCGTCTTGGGCTTC 57.891 50.000 0.00 0.00 44.64 3.86
502 577 3.541632 CATACATAACCGTCTTGGGCTT 58.458 45.455 0.00 0.00 44.64 4.35
504 579 1.602377 GCATACATAACCGTCTTGGGC 59.398 52.381 0.00 0.00 44.64 5.36
505 580 2.912771 TGCATACATAACCGTCTTGGG 58.087 47.619 0.00 0.00 44.64 4.12
506 581 3.876914 ACATGCATACATAACCGTCTTGG 59.123 43.478 0.00 0.00 38.21 3.61
507 582 5.484173 AACATGCATACATAACCGTCTTG 57.516 39.130 0.00 0.00 33.67 3.02
508 583 6.509418 AAAACATGCATACATAACCGTCTT 57.491 33.333 0.00 0.00 33.67 3.01
509 584 7.618502 TTAAAACATGCATACATAACCGTCT 57.381 32.000 0.00 0.00 33.67 4.18
510 585 8.850454 ATTTAAAACATGCATACATAACCGTC 57.150 30.769 0.00 0.00 33.67 4.79
511 586 9.646427 AAATTTAAAACATGCATACATAACCGT 57.354 25.926 0.00 0.00 33.67 4.83
554 629 9.507329 ACATCAACTTCAAACTCTACACAATAT 57.493 29.630 0.00 0.00 0.00 1.28
555 630 8.773645 CACATCAACTTCAAACTCTACACAATA 58.226 33.333 0.00 0.00 0.00 1.90
556 631 7.255242 CCACATCAACTTCAAACTCTACACAAT 60.255 37.037 0.00 0.00 0.00 2.71
557 632 6.038161 CCACATCAACTTCAAACTCTACACAA 59.962 38.462 0.00 0.00 0.00 3.33
560 635 5.063204 CCCACATCAACTTCAAACTCTACA 58.937 41.667 0.00 0.00 0.00 2.74
562 637 5.304686 ACCCACATCAACTTCAAACTCTA 57.695 39.130 0.00 0.00 0.00 2.43
563 638 4.170468 ACCCACATCAACTTCAAACTCT 57.830 40.909 0.00 0.00 0.00 3.24
564 639 4.455877 CCTACCCACATCAACTTCAAACTC 59.544 45.833 0.00 0.00 0.00 3.01
565 640 4.104102 TCCTACCCACATCAACTTCAAACT 59.896 41.667 0.00 0.00 0.00 2.66
566 641 4.215613 GTCCTACCCACATCAACTTCAAAC 59.784 45.833 0.00 0.00 0.00 2.93
567 642 4.141367 TGTCCTACCCACATCAACTTCAAA 60.141 41.667 0.00 0.00 0.00 2.69
568 643 3.392947 TGTCCTACCCACATCAACTTCAA 59.607 43.478 0.00 0.00 0.00 2.69
571 646 5.772393 TTATGTCCTACCCACATCAACTT 57.228 39.130 0.00 0.00 35.95 2.66
575 650 6.320434 TGATTTTATGTCCTACCCACATCA 57.680 37.500 0.00 0.00 35.95 3.07
578 653 5.882040 TGTTGATTTTATGTCCTACCCACA 58.118 37.500 0.00 0.00 0.00 4.17
580 655 9.707957 AATTATGTTGATTTTATGTCCTACCCA 57.292 29.630 0.00 0.00 0.00 4.51
599 674 9.040939 GCAGTGAAGTAAAAACCAAAATTATGT 57.959 29.630 0.00 0.00 0.00 2.29
601 676 9.260002 CAGCAGTGAAGTAAAAACCAAAATTAT 57.740 29.630 0.00 0.00 0.00 1.28
602 677 8.254508 ACAGCAGTGAAGTAAAAACCAAAATTA 58.745 29.630 0.00 0.00 0.00 1.40
604 679 6.639563 ACAGCAGTGAAGTAAAAACCAAAAT 58.360 32.000 0.00 0.00 0.00 1.82
605 680 6.031751 ACAGCAGTGAAGTAAAAACCAAAA 57.968 33.333 0.00 0.00 0.00 2.44
606 681 5.652994 ACAGCAGTGAAGTAAAAACCAAA 57.347 34.783 0.00 0.00 0.00 3.28
608 683 5.676552 TCTACAGCAGTGAAGTAAAAACCA 58.323 37.500 0.00 0.00 0.00 3.67
609 684 5.179555 CCTCTACAGCAGTGAAGTAAAAACC 59.820 44.000 0.00 0.00 0.00 3.27
611 686 6.169557 TCCTCTACAGCAGTGAAGTAAAAA 57.830 37.500 0.00 0.00 0.00 1.94
613 688 5.393135 CGATCCTCTACAGCAGTGAAGTAAA 60.393 44.000 0.00 0.00 0.00 2.01
615 690 3.628032 CGATCCTCTACAGCAGTGAAGTA 59.372 47.826 0.00 0.00 0.00 2.24
616 691 2.425312 CGATCCTCTACAGCAGTGAAGT 59.575 50.000 0.00 0.00 0.00 3.01
617 692 2.223688 CCGATCCTCTACAGCAGTGAAG 60.224 54.545 0.00 0.00 0.00 3.02
618 693 1.751351 CCGATCCTCTACAGCAGTGAA 59.249 52.381 0.00 0.00 0.00 3.18
619 694 1.393603 CCGATCCTCTACAGCAGTGA 58.606 55.000 0.00 0.00 0.00 3.41
620 695 0.249238 GCCGATCCTCTACAGCAGTG 60.249 60.000 0.00 0.00 0.00 3.66
621 696 0.396417 AGCCGATCCTCTACAGCAGT 60.396 55.000 0.00 0.00 0.00 4.40
622 697 1.539388 CTAGCCGATCCTCTACAGCAG 59.461 57.143 0.00 0.00 0.00 4.24
625 700 1.883275 CACCTAGCCGATCCTCTACAG 59.117 57.143 0.00 0.00 0.00 2.74
627 702 0.599060 GCACCTAGCCGATCCTCTAC 59.401 60.000 0.00 0.00 37.23 2.59
628 703 0.889638 CGCACCTAGCCGATCCTCTA 60.890 60.000 0.00 0.00 41.38 2.43
629 704 2.196925 CGCACCTAGCCGATCCTCT 61.197 63.158 0.00 0.00 41.38 3.69
630 705 2.336809 CGCACCTAGCCGATCCTC 59.663 66.667 0.00 0.00 41.38 3.71
631 706 3.227276 CCGCACCTAGCCGATCCT 61.227 66.667 0.00 0.00 41.38 3.24
632 707 4.971125 GCCGCACCTAGCCGATCC 62.971 72.222 0.00 0.00 41.38 3.36
633 708 4.971125 GGCCGCACCTAGCCGATC 62.971 72.222 0.00 0.00 39.87 3.69
647 722 4.769859 TTTTATTTCACTAACGGTGGCC 57.230 40.909 0.00 0.00 45.38 5.36
648 723 6.864165 TGAATTTTTATTTCACTAACGGTGGC 59.136 34.615 0.00 0.00 45.38 5.01
649 724 8.980143 ATGAATTTTTATTTCACTAACGGTGG 57.020 30.769 0.00 0.00 45.38 4.61
651 726 9.634163 GGAATGAATTTTTATTTCACTAACGGT 57.366 29.630 0.00 0.00 36.02 4.83
652 727 9.632807 TGGAATGAATTTTTATTTCACTAACGG 57.367 29.630 0.00 0.00 36.02 4.44
664 739 8.792633 CAGTGGAGTTAGTGGAATGAATTTTTA 58.207 33.333 0.00 0.00 0.00 1.52
665 740 7.255942 CCAGTGGAGTTAGTGGAATGAATTTTT 60.256 37.037 1.68 0.00 42.63 1.94
668 743 5.256474 CCAGTGGAGTTAGTGGAATGAATT 58.744 41.667 1.68 0.00 42.63 2.17
670 745 3.009033 CCCAGTGGAGTTAGTGGAATGAA 59.991 47.826 11.95 0.00 42.63 2.57
672 747 2.356125 CCCCAGTGGAGTTAGTGGAATG 60.356 54.545 11.95 0.00 42.63 2.67
675 750 0.490017 TCCCCAGTGGAGTTAGTGGA 59.510 55.000 11.95 3.58 42.63 4.02
676 751 3.082619 TCCCCAGTGGAGTTAGTGG 57.917 57.895 11.95 0.74 38.61 4.00
689 764 4.947883 TCTCTCTTTCTAACTGATCCCCA 58.052 43.478 0.00 0.00 0.00 4.96
690 765 5.741673 GCATCTCTCTTTCTAACTGATCCCC 60.742 48.000 0.00 0.00 0.00 4.81
691 766 5.070313 AGCATCTCTCTTTCTAACTGATCCC 59.930 44.000 0.00 0.00 0.00 3.85
693 768 8.076178 GTCTAGCATCTCTCTTTCTAACTGATC 58.924 40.741 0.00 0.00 0.00 2.92
694 769 7.779798 AGTCTAGCATCTCTCTTTCTAACTGAT 59.220 37.037 0.00 0.00 0.00 2.90
695 770 7.066887 CAGTCTAGCATCTCTCTTTCTAACTGA 59.933 40.741 0.00 0.00 31.83 3.41
697 772 7.067008 GTCAGTCTAGCATCTCTCTTTCTAACT 59.933 40.741 0.00 0.00 0.00 2.24
698 773 7.193595 GTCAGTCTAGCATCTCTCTTTCTAAC 58.806 42.308 0.00 0.00 0.00 2.34
699 774 6.037720 CGTCAGTCTAGCATCTCTCTTTCTAA 59.962 42.308 0.00 0.00 0.00 2.10
700 775 5.525745 CGTCAGTCTAGCATCTCTCTTTCTA 59.474 44.000 0.00 0.00 0.00 2.10
701 776 4.335315 CGTCAGTCTAGCATCTCTCTTTCT 59.665 45.833 0.00 0.00 0.00 2.52
702 777 4.095782 ACGTCAGTCTAGCATCTCTCTTTC 59.904 45.833 0.00 0.00 0.00 2.62
704 779 3.376859 CACGTCAGTCTAGCATCTCTCTT 59.623 47.826 0.00 0.00 0.00 2.85
705 780 2.942376 CACGTCAGTCTAGCATCTCTCT 59.058 50.000 0.00 0.00 0.00 3.10
706 781 2.540769 GCACGTCAGTCTAGCATCTCTC 60.541 54.545 0.00 0.00 0.00 3.20
708 783 1.535015 GGCACGTCAGTCTAGCATCTC 60.535 57.143 0.00 0.00 0.00 2.75
709 784 0.457851 GGCACGTCAGTCTAGCATCT 59.542 55.000 0.00 0.00 0.00 2.90
710 785 0.528684 GGGCACGTCAGTCTAGCATC 60.529 60.000 0.00 0.00 0.00 3.91
712 787 1.185618 AAGGGCACGTCAGTCTAGCA 61.186 55.000 0.00 0.00 0.00 3.49
713 788 0.037232 AAAGGGCACGTCAGTCTAGC 60.037 55.000 0.00 0.00 0.00 3.42
714 789 2.731341 CGTAAAGGGCACGTCAGTCTAG 60.731 54.545 0.00 0.00 34.74 2.43
715 790 1.200716 CGTAAAGGGCACGTCAGTCTA 59.799 52.381 0.00 0.00 34.74 2.59
716 791 0.038526 CGTAAAGGGCACGTCAGTCT 60.039 55.000 0.00 0.00 34.74 3.24
717 792 1.012486 CCGTAAAGGGCACGTCAGTC 61.012 60.000 0.00 0.00 37.71 3.51
719 794 3.870606 CCGTAAAGGGCACGTCAG 58.129 61.111 0.00 0.00 37.71 3.51
728 803 3.068307 CACTCAGTAGATCCCCGTAAAGG 59.932 52.174 0.00 0.00 40.63 3.11
729 804 3.952323 TCACTCAGTAGATCCCCGTAAAG 59.048 47.826 0.00 0.00 0.00 1.85
731 806 3.657398 TCACTCAGTAGATCCCCGTAA 57.343 47.619 0.00 0.00 0.00 3.18
732 807 3.878237 ATCACTCAGTAGATCCCCGTA 57.122 47.619 0.00 0.00 0.00 4.02
733 808 2.757894 ATCACTCAGTAGATCCCCGT 57.242 50.000 0.00 0.00 0.00 5.28
735 810 4.525100 GTCCTAATCACTCAGTAGATCCCC 59.475 50.000 0.00 0.00 0.00 4.81
736 811 4.525100 GGTCCTAATCACTCAGTAGATCCC 59.475 50.000 0.00 0.00 0.00 3.85
738 813 6.065374 TCAGGTCCTAATCACTCAGTAGATC 58.935 44.000 0.00 0.00 0.00 2.75
739 814 6.019656 TCAGGTCCTAATCACTCAGTAGAT 57.980 41.667 0.00 0.00 0.00 1.98
740 815 5.452341 TCAGGTCCTAATCACTCAGTAGA 57.548 43.478 0.00 0.00 0.00 2.59
742 817 5.363868 CCAATCAGGTCCTAATCACTCAGTA 59.636 44.000 0.00 0.00 0.00 2.74
743 818 4.163078 CCAATCAGGTCCTAATCACTCAGT 59.837 45.833 0.00 0.00 0.00 3.41
744 819 4.701765 CCAATCAGGTCCTAATCACTCAG 58.298 47.826 0.00 0.00 0.00 3.35
745 820 3.118261 GCCAATCAGGTCCTAATCACTCA 60.118 47.826 0.00 0.00 40.61 3.41
746 821 3.135530 AGCCAATCAGGTCCTAATCACTC 59.864 47.826 0.00 0.00 40.61 3.51
748 823 3.209410 CAGCCAATCAGGTCCTAATCAC 58.791 50.000 0.00 0.00 40.61 3.06
749 824 2.173356 CCAGCCAATCAGGTCCTAATCA 59.827 50.000 0.00 0.00 40.61 2.57
751 826 2.492025 TCCAGCCAATCAGGTCCTAAT 58.508 47.619 0.00 0.00 40.61 1.73
752 827 1.965414 TCCAGCCAATCAGGTCCTAA 58.035 50.000 0.00 0.00 40.61 2.69
753 828 1.965414 TTCCAGCCAATCAGGTCCTA 58.035 50.000 0.00 0.00 40.61 2.94
755 830 1.753073 CAATTCCAGCCAATCAGGTCC 59.247 52.381 0.00 0.00 40.61 4.46
756 831 2.726821 TCAATTCCAGCCAATCAGGTC 58.273 47.619 0.00 0.00 40.61 3.85
757 832 2.905415 TCAATTCCAGCCAATCAGGT 57.095 45.000 0.00 0.00 40.61 4.00
758 833 4.748277 AATTCAATTCCAGCCAATCAGG 57.252 40.909 0.00 0.00 41.84 3.86
759 834 6.755141 CACTTAATTCAATTCCAGCCAATCAG 59.245 38.462 0.00 0.00 0.00 2.90
760 835 6.436847 TCACTTAATTCAATTCCAGCCAATCA 59.563 34.615 0.00 0.00 0.00 2.57
762 837 6.664816 TCTCACTTAATTCAATTCCAGCCAAT 59.335 34.615 0.00 0.00 0.00 3.16
764 839 5.569355 TCTCACTTAATTCAATTCCAGCCA 58.431 37.500 0.00 0.00 0.00 4.75
765 840 6.705863 ATCTCACTTAATTCAATTCCAGCC 57.294 37.500 0.00 0.00 0.00 4.85
766 841 7.521261 GCCTATCTCACTTAATTCAATTCCAGC 60.521 40.741 0.00 0.00 0.00 4.85
767 842 7.040823 GGCCTATCTCACTTAATTCAATTCCAG 60.041 40.741 0.00 0.00 0.00 3.86
768 843 6.772716 GGCCTATCTCACTTAATTCAATTCCA 59.227 38.462 0.00 0.00 0.00 3.53
769 844 6.207614 GGGCCTATCTCACTTAATTCAATTCC 59.792 42.308 0.84 0.00 0.00 3.01
770 845 6.772716 TGGGCCTATCTCACTTAATTCAATTC 59.227 38.462 4.53 0.00 0.00 2.17
772 847 6.064717 GTGGGCCTATCTCACTTAATTCAAT 58.935 40.000 4.53 0.00 0.00 2.57
773 848 5.437060 GTGGGCCTATCTCACTTAATTCAA 58.563 41.667 4.53 0.00 0.00 2.69
776 851 3.785887 TGGTGGGCCTATCTCACTTAATT 59.214 43.478 4.53 0.00 35.27 1.40
778 853 2.771943 CTGGTGGGCCTATCTCACTTAA 59.228 50.000 4.53 0.00 35.27 1.85
779 854 2.292918 ACTGGTGGGCCTATCTCACTTA 60.293 50.000 4.53 0.00 35.27 2.24
780 855 1.207791 CTGGTGGGCCTATCTCACTT 58.792 55.000 4.53 0.00 35.27 3.16
781 856 0.043334 ACTGGTGGGCCTATCTCACT 59.957 55.000 4.53 0.00 35.27 3.41
782 857 1.789523 TACTGGTGGGCCTATCTCAC 58.210 55.000 4.53 0.79 35.27 3.51
783 858 2.561209 TTACTGGTGGGCCTATCTCA 57.439 50.000 4.53 0.00 35.27 3.27
784 859 3.926058 TTTTACTGGTGGGCCTATCTC 57.074 47.619 4.53 0.00 35.27 2.75
786 861 4.532834 TGATTTTTACTGGTGGGCCTATC 58.467 43.478 4.53 0.00 35.27 2.08
787 862 4.536765 CTGATTTTTACTGGTGGGCCTAT 58.463 43.478 4.53 0.00 35.27 2.57
790 865 1.824852 CCTGATTTTTACTGGTGGGCC 59.175 52.381 0.00 0.00 0.00 5.80
791 866 1.824852 CCCTGATTTTTACTGGTGGGC 59.175 52.381 0.00 0.00 0.00 5.36
792 867 2.456577 CCCCTGATTTTTACTGGTGGG 58.543 52.381 0.00 0.00 0.00 4.61
793 868 2.456577 CCCCCTGATTTTTACTGGTGG 58.543 52.381 0.00 0.00 0.00 4.61
794 869 1.824852 GCCCCCTGATTTTTACTGGTG 59.175 52.381 0.00 0.00 0.00 4.17
796 871 1.485124 GGCCCCCTGATTTTTACTGG 58.515 55.000 0.00 0.00 0.00 4.00
798 873 1.089123 TGGGCCCCCTGATTTTTACT 58.911 50.000 22.27 0.00 36.94 2.24
799 874 1.945580 TTGGGCCCCCTGATTTTTAC 58.054 50.000 22.27 0.00 36.94 2.01
800 875 2.959421 ATTGGGCCCCCTGATTTTTA 57.041 45.000 22.27 0.00 36.94 1.52
801 876 2.058251 AATTGGGCCCCCTGATTTTT 57.942 45.000 22.27 0.00 36.94 1.94
802 877 2.317594 TCTAATTGGGCCCCCTGATTTT 59.682 45.455 22.27 4.78 36.94 1.82
804 879 1.619298 TCTAATTGGGCCCCCTGATT 58.381 50.000 22.27 16.14 36.94 2.57
805 880 1.430464 CATCTAATTGGGCCCCCTGAT 59.570 52.381 22.27 12.80 36.94 2.90
806 881 0.852842 CATCTAATTGGGCCCCCTGA 59.147 55.000 22.27 10.90 36.94 3.86
807 882 0.852842 TCATCTAATTGGGCCCCCTG 59.147 55.000 22.27 5.10 36.94 4.45
808 883 1.152649 CTCATCTAATTGGGCCCCCT 58.847 55.000 22.27 5.88 36.94 4.79
809 884 0.113190 CCTCATCTAATTGGGCCCCC 59.887 60.000 22.27 0.00 0.00 5.40
810 885 1.149101 TCCTCATCTAATTGGGCCCC 58.851 55.000 22.27 0.85 0.00 5.80
811 886 1.494721 TGTCCTCATCTAATTGGGCCC 59.505 52.381 17.59 17.59 0.00 5.80
812 887 2.576615 GTGTCCTCATCTAATTGGGCC 58.423 52.381 0.00 0.00 0.00 5.80
813 888 2.213499 CGTGTCCTCATCTAATTGGGC 58.787 52.381 0.00 0.00 0.00 5.36
815 890 4.341235 TCCTACGTGTCCTCATCTAATTGG 59.659 45.833 0.00 0.00 0.00 3.16
816 891 5.515797 TCCTACGTGTCCTCATCTAATTG 57.484 43.478 0.00 0.00 0.00 2.32
817 892 5.069251 CCTTCCTACGTGTCCTCATCTAATT 59.931 44.000 0.00 0.00 0.00 1.40
818 893 4.585162 CCTTCCTACGTGTCCTCATCTAAT 59.415 45.833 0.00 0.00 0.00 1.73
819 894 3.952323 CCTTCCTACGTGTCCTCATCTAA 59.048 47.826 0.00 0.00 0.00 2.10
820 895 3.053842 ACCTTCCTACGTGTCCTCATCTA 60.054 47.826 0.00 0.00 0.00 1.98
821 896 2.291670 ACCTTCCTACGTGTCCTCATCT 60.292 50.000 0.00 0.00 0.00 2.90
826 901 1.546961 CTGACCTTCCTACGTGTCCT 58.453 55.000 0.00 0.00 0.00 3.85
827 902 0.108756 GCTGACCTTCCTACGTGTCC 60.109 60.000 0.00 0.00 0.00 4.02
828 903 0.456312 CGCTGACCTTCCTACGTGTC 60.456 60.000 0.00 0.00 0.00 3.67
830 905 1.153823 CCGCTGACCTTCCTACGTG 60.154 63.158 0.00 0.00 0.00 4.49
831 906 1.303888 TCCGCTGACCTTCCTACGT 60.304 57.895 0.00 0.00 0.00 3.57
832 907 1.313812 ACTCCGCTGACCTTCCTACG 61.314 60.000 0.00 0.00 0.00 3.51
834 909 0.683504 GGACTCCGCTGACCTTCCTA 60.684 60.000 0.00 0.00 0.00 2.94
835 910 1.985116 GGACTCCGCTGACCTTCCT 60.985 63.158 0.00 0.00 0.00 3.36
836 911 2.579738 GGACTCCGCTGACCTTCC 59.420 66.667 0.00 0.00 0.00 3.46
837 912 2.182030 CGGACTCCGCTGACCTTC 59.818 66.667 4.10 0.00 41.17 3.46
847 922 1.465187 GCGCAATAAACAACGGACTCC 60.465 52.381 0.30 0.00 0.00 3.85
848 923 1.785518 CGCGCAATAAACAACGGACTC 60.786 52.381 8.75 0.00 0.00 3.36
849 924 0.165079 CGCGCAATAAACAACGGACT 59.835 50.000 8.75 0.00 0.00 3.85
851 926 1.154376 GCGCGCAATAAACAACGGA 60.154 52.632 29.10 0.00 0.00 4.69
852 927 2.484681 CGCGCGCAATAAACAACGG 61.485 57.895 32.61 5.79 0.00 4.44
853 928 1.790510 ACGCGCGCAATAAACAACG 60.791 52.632 32.58 12.91 0.00 4.10
854 929 0.994737 ACACGCGCGCAATAAACAAC 60.995 50.000 32.58 0.00 0.00 3.32
855 930 0.994241 CACACGCGCGCAATAAACAA 60.994 50.000 32.58 0.00 0.00 2.83
858 933 0.093875 CTACACACGCGCGCAATAAA 59.906 50.000 32.58 10.54 0.00 1.40
859 934 1.009903 ACTACACACGCGCGCAATAA 61.010 50.000 32.58 12.32 0.00 1.40
860 935 0.179169 TACTACACACGCGCGCAATA 60.179 50.000 32.58 16.11 0.00 1.90
861 936 0.804544 ATACTACACACGCGCGCAAT 60.805 50.000 32.58 16.29 0.00 3.56
862 937 1.009903 AATACTACACACGCGCGCAA 61.010 50.000 32.58 9.92 0.00 4.85
863 938 0.179169 TAATACTACACACGCGCGCA 60.179 50.000 32.58 9.42 0.00 6.09
864 939 1.121967 GATAATACTACACACGCGCGC 59.878 52.381 32.58 23.91 0.00 6.86
865 940 1.377830 CGATAATACTACACACGCGCG 59.622 52.381 30.96 30.96 0.00 6.86
867 942 3.870007 ACTCGATAATACTACACACGCG 58.130 45.455 3.53 3.53 0.00 6.01
868 943 6.653183 TCTAACTCGATAATACTACACACGC 58.347 40.000 0.00 0.00 0.00 5.34
869 944 9.661187 ATTTCTAACTCGATAATACTACACACG 57.339 33.333 0.00 0.00 0.00 4.49
885 960 5.357596 ACTCAGACGAGGGTATTTCTAACTC 59.642 44.000 0.00 0.00 44.17 3.01
888 963 5.507637 AGACTCAGACGAGGGTATTTCTAA 58.492 41.667 0.00 0.00 44.17 2.10
889 964 5.104444 AGAGACTCAGACGAGGGTATTTCTA 60.104 44.000 5.02 0.00 44.17 2.10
890 965 3.949113 GAGACTCAGACGAGGGTATTTCT 59.051 47.826 0.00 0.00 44.17 2.52
891 966 3.949113 AGAGACTCAGACGAGGGTATTTC 59.051 47.826 5.02 0.00 44.17 2.17
894 969 2.506231 TGAGAGACTCAGACGAGGGTAT 59.494 50.000 5.02 0.00 44.17 2.73
895 970 1.907255 TGAGAGACTCAGACGAGGGTA 59.093 52.381 5.02 0.00 44.17 3.69
897 972 1.091537 GTGAGAGACTCAGACGAGGG 58.908 60.000 5.02 0.00 41.46 4.30
898 973 0.724549 CGTGAGAGACTCAGACGAGG 59.275 60.000 17.06 0.00 41.46 4.63
977 1061 2.438075 CCCTCTCTGCAGCTTGCC 60.438 66.667 9.47 0.00 44.23 4.52
978 1062 3.132801 GCCCTCTCTGCAGCTTGC 61.133 66.667 9.47 3.30 45.29 4.01
979 1063 2.793160 TTCGCCCTCTCTGCAGCTTG 62.793 60.000 9.47 1.64 0.00 4.01
980 1064 2.116983 TTTCGCCCTCTCTGCAGCTT 62.117 55.000 9.47 0.00 0.00 3.74
1486 1593 2.490903 GGCGGAGGATATATGTACGTGT 59.509 50.000 0.00 0.00 0.00 4.49
1488 1595 2.799017 TGGCGGAGGATATATGTACGT 58.201 47.619 0.00 0.00 0.00 3.57
1489 1596 3.490933 CCATGGCGGAGGATATATGTACG 60.491 52.174 0.00 0.00 36.56 3.67
1490 1597 3.741388 GCCATGGCGGAGGATATATGTAC 60.741 52.174 23.48 0.00 36.56 2.90
1507 1614 2.998670 GTCACCGATGATATCAGCCATG 59.001 50.000 15.07 12.89 37.14 3.66
1543 1651 7.320399 CCAATAGGACAACTAAATTTTGGACC 58.680 38.462 0.00 0.00 39.11 4.46
1570 1678 2.370849 GTGTTGTCTAGAGGGACCCAAA 59.629 50.000 14.60 0.00 35.54 3.28
1571 1679 1.975680 GTGTTGTCTAGAGGGACCCAA 59.024 52.381 14.60 0.00 35.54 4.12
1574 1682 1.275573 GGTGTGTTGTCTAGAGGGACC 59.724 57.143 0.00 0.00 35.54 4.46
1575 1683 1.968493 TGGTGTGTTGTCTAGAGGGAC 59.032 52.381 0.00 0.00 36.81 4.46
1589 1697 4.012374 AGTAATTCCTGCTCAATGGTGTG 58.988 43.478 0.00 0.00 0.00 3.82
1633 1741 8.480643 AAGTGATTGCTGTTACTGATTAGTAC 57.519 34.615 0.00 0.00 39.06 2.73
1678 1798 2.659757 CGATGCTGCACACAAATTTGAG 59.340 45.455 24.64 18.71 0.00 3.02
1679 1799 2.607526 CCGATGCTGCACACAAATTTGA 60.608 45.455 24.64 0.68 0.00 2.69
1728 4442 2.279517 CGAGCTGTATGGGCCGTC 60.280 66.667 0.00 0.00 0.00 4.79
1734 4454 2.279517 GTCGGCCGAGCTGTATGG 60.280 66.667 31.97 0.00 36.18 2.74
1736 4456 2.494918 GTGTCGGCCGAGCTGTAT 59.505 61.111 31.97 0.00 36.18 2.29
1871 4591 0.618458 TGGTGATGGACTTACTGCCC 59.382 55.000 0.00 0.00 0.00 5.36
1898 4618 3.678072 GCACGCATGATATAATACACGGT 59.322 43.478 0.00 0.00 0.00 4.83
1924 4695 1.826385 AGAAAATTGTCCGCCCTCAG 58.174 50.000 0.00 0.00 0.00 3.35
1942 4716 8.954950 TTAGCTCATCCTAATTTTCTCTCAAG 57.045 34.615 0.00 0.00 0.00 3.02
1991 5495 9.277783 ACAACAGGCATAATATCATTTACTCTC 57.722 33.333 0.00 0.00 0.00 3.20
2004 5511 5.124457 CAGCACTAGAAACAACAGGCATAAT 59.876 40.000 0.00 0.00 0.00 1.28
2257 5788 2.111878 CTGGGCCATCCGTGATCC 59.888 66.667 6.72 0.00 38.76 3.36
2259 5790 2.257409 GACACTGGGCCATCCGTGAT 62.257 60.000 25.83 13.14 40.18 3.06
2605 6997 6.166982 GCATACAAGTGAGGACCTTATATCC 58.833 44.000 0.00 0.00 36.38 2.59
2639 7043 6.703319 TCAGGCATCAATGATGAACAAAATT 58.297 32.000 25.77 0.25 42.09 1.82
2678 7091 7.436430 TGTCATATCTTGTCTCTACCGTATC 57.564 40.000 0.00 0.00 0.00 2.24
2725 7138 5.592282 TCAGACAAAGATGCCACTACAAAAA 59.408 36.000 0.00 0.00 0.00 1.94
2726 7139 5.129634 TCAGACAAAGATGCCACTACAAAA 58.870 37.500 0.00 0.00 0.00 2.44
2819 7262 3.255149 CAGGCTCTCAGACTGCAAAATTT 59.745 43.478 0.00 0.00 45.62 1.82
2851 7294 1.079819 AGACCGCCTTGATGACACG 60.080 57.895 0.00 0.00 0.00 4.49
3078 8007 9.821662 GTTTGACTATTCGTTTGCTTTACTTAT 57.178 29.630 0.00 0.00 0.00 1.73
3130 10785 3.131933 TCTCTAAGCCTGCAAGTCATCTC 59.868 47.826 0.00 0.00 0.00 2.75
3309 11000 2.549349 GCACGGTCCTAAAAGTTGAGGA 60.549 50.000 3.16 3.16 39.63 3.71
3460 11151 5.963092 AGAGTAAGGGGTATAAGGTAGGTC 58.037 45.833 0.00 0.00 0.00 3.85
3473 11324 1.690219 ATGCAGGCGAGAGTAAGGGG 61.690 60.000 0.00 0.00 0.00 4.79
3539 11446 1.904537 TCAGGAGAAATGCTCAGCAGA 59.095 47.619 5.13 0.00 45.81 4.26
3540 11447 2.008329 GTCAGGAGAAATGCTCAGCAG 58.992 52.381 5.13 0.00 45.81 4.24
3541 11448 1.348696 TGTCAGGAGAAATGCTCAGCA 59.651 47.619 0.00 0.00 45.81 4.41
3754 11669 7.442364 GTGTTATCACTTATCAGTATGCCACAT 59.558 37.037 0.00 0.00 40.98 3.21
3755 11670 6.761242 GTGTTATCACTTATCAGTATGCCACA 59.239 38.462 0.00 0.00 40.98 4.17
3756 11671 7.178712 GTGTTATCACTTATCAGTATGCCAC 57.821 40.000 0.00 0.00 40.98 5.01
4278 12253 4.122337 TGAGTACCCTGGTAGAAGTTCA 57.878 45.455 5.50 0.00 0.00 3.18
4400 12380 4.098914 TCACCATCACAAAAAGTAGCCT 57.901 40.909 0.00 0.00 0.00 4.58
4455 12438 4.275810 CATTCTGGATCATCCTTGGTTGT 58.724 43.478 4.96 0.00 37.46 3.32
4572 12555 6.729690 TCCTTGACTTTGAAAATCAATGGT 57.270 33.333 2.08 5.38 36.11 3.55
4586 12569 6.670695 AGCCACATTTATTTTCCTTGACTT 57.329 33.333 0.00 0.00 0.00 3.01
4637 12623 5.483685 TGGTGCTTATCGCCTAATAGAAT 57.516 39.130 0.00 0.00 45.61 2.40
4695 12681 2.674177 CGAAGCAAACACCGACCTATCT 60.674 50.000 0.00 0.00 0.00 1.98
4754 12740 7.912383 TGGCTACGCTTAATTAATACAAGTTC 58.088 34.615 0.00 0.00 0.00 3.01
4855 13031 6.373186 ACTTTGCTAAGTTCAAGTGTTACC 57.627 37.500 7.78 0.00 41.85 2.85
4899 14902 6.457799 GCGGGGTAAATACTTGTATTGTCAAG 60.458 42.308 6.76 5.12 46.89 3.02
5000 15190 4.163552 TCACGTATGACTGCTTAAGTTCG 58.836 43.478 4.02 0.00 40.07 3.95
5120 15314 1.298563 CATATGCCAAAGCCGTGCG 60.299 57.895 0.00 0.00 38.69 5.34
5132 15326 3.725895 CGCGTCATAGAAATGGCATATGC 60.726 47.826 19.79 19.79 37.59 3.14
5229 15425 6.073711 TGCATGTACTTGTTTTCAATGCAATG 60.074 34.615 10.17 0.00 43.27 2.82
5388 17283 6.356190 GTGCAAATTGTTGTAGTCGAGTTAAC 59.644 38.462 0.00 5.65 37.06 2.01
5392 17287 3.874543 TGTGCAAATTGTTGTAGTCGAGT 59.125 39.130 0.00 0.00 37.06 4.18
5502 17397 1.267806 ACTTCTTTGCGTTGCAGGATG 59.732 47.619 0.00 1.03 40.61 3.51
5509 17404 6.228273 TCTAGATCAAACTTCTTTGCGTTG 57.772 37.500 0.00 0.00 37.31 4.10
5528 17423 4.991153 TGAGCTGGTCAGTTGTATCTAG 57.009 45.455 5.28 0.00 0.00 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.