Multiple sequence alignment - TraesCS7D01G498500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G498500 chr7D 100.000 7714 0 0 1 7714 605143856 605151569 0.000000e+00 14246.0
1 TraesCS7D01G498500 chr7D 91.046 3641 198 44 123 3682 604876255 604872662 0.000000e+00 4800.0
2 TraesCS7D01G498500 chr7D 91.106 3092 150 32 123 3133 604961478 604958431 0.000000e+00 4071.0
3 TraesCS7D01G498500 chr7D 92.255 2208 148 11 1489 3682 604983350 604981152 0.000000e+00 3109.0
4 TraesCS7D01G498500 chr7D 90.245 1589 135 9 1489 3063 604892041 604890459 0.000000e+00 2058.0
5 TraesCS7D01G498500 chr7D 85.778 1568 176 30 1545 3083 603823742 603825291 0.000000e+00 1616.0
6 TraesCS7D01G498500 chr7D 95.024 623 27 3 3061 3682 604890301 604889682 0.000000e+00 976.0
7 TraesCS7D01G498500 chr7D 85.088 570 70 12 3115 3682 603825283 603825839 1.230000e-157 568.0
8 TraesCS7D01G498500 chr7D 83.567 499 55 16 197 673 604892949 604892456 7.750000e-120 442.0
9 TraesCS7D01G498500 chr7D 82.809 477 60 15 213 673 604984253 604983783 2.830000e-109 407.0
10 TraesCS7D01G498500 chr7D 100.000 219 0 0 8198 8416 605152053 605152271 1.020000e-108 405.0
11 TraesCS7D01G498500 chr7D 84.795 342 46 5 946 1286 604892403 604892067 1.050000e-88 339.0
12 TraesCS7D01G498500 chr7D 84.164 341 51 2 946 1286 604983720 604983383 2.270000e-85 327.0
13 TraesCS7D01G498500 chr7D 83.582 134 17 4 4519 4647 27362959 27363092 4.130000e-23 121.0
14 TraesCS7D01G498500 chr7D 94.643 56 3 0 80 135 604876352 604876297 4.180000e-13 87.9
15 TraesCS7D01G498500 chr7D 92.857 56 4 0 80 135 604961575 604961520 1.950000e-11 82.4
16 TraesCS7D01G498500 chr7B 87.905 2902 209 60 826 3683 687420492 687417689 0.000000e+00 3284.0
17 TraesCS7D01G498500 chr7B 90.556 2213 178 19 1489 3682 687593591 687595791 0.000000e+00 2900.0
18 TraesCS7D01G498500 chr7B 90.431 2205 182 15 1495 3682 686154535 686156727 0.000000e+00 2876.0
19 TraesCS7D01G498500 chr7B 91.519 566 37 8 214 773 687422120 687421560 0.000000e+00 769.0
20 TraesCS7D01G498500 chr7B 95.166 331 12 1 7368 7694 687595788 687596118 3.480000e-143 520.0
21 TraesCS7D01G498500 chr7B 83.263 472 58 14 213 668 687592594 687593060 1.690000e-111 414.0
22 TraesCS7D01G498500 chr7B 85.960 349 45 4 321 668 686153672 686154017 3.710000e-98 370.0
23 TraesCS7D01G498500 chr7B 81.210 463 55 16 229 673 686613288 686613736 2.250000e-90 344.0
24 TraesCS7D01G498500 chr7B 82.210 371 59 6 5808 6175 615267177 615267543 6.340000e-81 313.0
25 TraesCS7D01G498500 chr7B 85.366 287 41 1 946 1232 686154180 686154465 6.390000e-76 296.0
26 TraesCS7D01G498500 chr7B 79.630 378 67 5 5808 6175 123776490 123776867 6.480000e-66 263.0
27 TraesCS7D01G498500 chr7B 79.630 378 66 6 5808 6175 716357736 716358112 2.330000e-65 261.0
28 TraesCS7D01G498500 chr7B 81.703 317 50 7 5067 5380 123768234 123768545 3.010000e-64 257.0
29 TraesCS7D01G498500 chr7B 78.750 400 70 11 3683 4081 111899653 111899268 3.900000e-63 254.0
30 TraesCS7D01G498500 chr7B 86.667 60 7 1 1282 1340 434839314 434839255 1.960000e-06 65.8
31 TraesCS7D01G498500 chr7A 90.926 2204 176 12 1494 3682 696810151 696807957 0.000000e+00 2940.0
32 TraesCS7D01G498500 chr7A 89.027 1285 100 15 3845 5099 466518283 466519556 0.000000e+00 1554.0
33 TraesCS7D01G498500 chr7A 85.059 1265 89 37 6170 7367 466519553 466520784 0.000000e+00 1197.0
34 TraesCS7D01G498500 chr7A 82.766 499 59 16 197 673 696811059 696810566 3.630000e-113 420.0
35 TraesCS7D01G498500 chr7A 83.861 316 36 9 5068 5381 45162941 45163243 3.840000e-73 287.0
36 TraesCS7D01G498500 chr7A 83.784 148 19 4 4812 4959 44869497 44869355 1.470000e-27 135.0
37 TraesCS7D01G498500 chr7A 83.108 148 20 4 4812 4959 44972218 44972076 6.860000e-26 130.0
38 TraesCS7D01G498500 chr7A 83.108 148 18 6 4812 4959 44930397 44930257 2.470000e-25 128.0
39 TraesCS7D01G498500 chr7A 82.432 148 21 4 4812 4959 169317914 169317772 3.190000e-24 124.0
40 TraesCS7D01G498500 chr7A 76.860 242 39 12 3952 4177 169326718 169326478 4.130000e-23 121.0
41 TraesCS7D01G498500 chr4D 83.298 1419 183 28 4351 5758 209913232 209914607 0.000000e+00 1258.0
42 TraesCS7D01G498500 chr4D 77.513 756 134 28 5067 5805 424189926 424190662 1.010000e-113 422.0
43 TraesCS7D01G498500 chr4D 77.824 726 130 24 5067 5779 448170567 448171274 3.630000e-113 420.0
44 TraesCS7D01G498500 chr4D 81.481 378 57 5 5808 6175 448173275 448173649 1.780000e-76 298.0
45 TraesCS7D01G498500 chr4D 73.754 682 122 35 3684 4331 209912438 209913096 1.840000e-51 215.0
46 TraesCS7D01G498500 chr4D 82.836 134 18 4 4519 4647 355463884 355463751 1.920000e-21 115.0
47 TraesCS7D01G498500 chr1D 82.049 1025 127 29 3880 4879 63063679 63064671 0.000000e+00 821.0
48 TraesCS7D01G498500 chr1D 80.175 913 103 37 6516 7357 63348028 63348933 5.580000e-171 612.0
49 TraesCS7D01G498500 chr1D 84.135 624 86 10 4883 5501 63072200 63072815 7.270000e-165 592.0
50 TraesCS7D01G498500 chr1D 84.921 252 34 3 5811 6060 63072820 63073069 1.400000e-62 252.0
51 TraesCS7D01G498500 chrUn 100.000 407 0 0 960 1366 477988448 477988042 0.000000e+00 752.0
52 TraesCS7D01G498500 chr1A 82.148 745 112 14 5055 5790 543179352 543180084 3.340000e-173 619.0
53 TraesCS7D01G498500 chr1A 80.556 144 21 5 4817 4959 577512281 577512144 4.160000e-18 104.0
54 TraesCS7D01G498500 chr1A 91.837 49 3 1 1300 1348 106228115 106228068 5.450000e-07 67.6
55 TraesCS7D01G498500 chr2A 83.175 630 83 14 4351 4965 744926147 744925526 9.540000e-154 555.0
56 TraesCS7D01G498500 chr2A 87.781 401 43 5 5362 5758 744925512 744925114 1.650000e-126 464.0
57 TraesCS7D01G498500 chr2A 80.797 552 86 10 5068 5612 129471016 129471554 1.690000e-111 414.0
58 TraesCS7D01G498500 chr2A 80.690 145 19 8 4817 4958 676184264 676184126 4.160000e-18 104.0
59 TraesCS7D01G498500 chr2B 79.856 695 96 25 5808 6468 182870328 182869644 1.280000e-127 468.0
60 TraesCS7D01G498500 chr2B 93.478 46 3 0 7331 7376 12056308 12056263 1.520000e-07 69.4
61 TraesCS7D01G498500 chr2B 95.238 42 2 0 1300 1341 216462848 216462807 5.450000e-07 67.6
62 TraesCS7D01G498500 chr3A 76.729 752 140 28 5067 5805 626723772 626724501 3.680000e-103 387.0
63 TraesCS7D01G498500 chr3A 80.688 378 59 7 5808 6175 626726467 626726840 1.790000e-71 281.0
64 TraesCS7D01G498500 chr3A 87.719 57 6 1 4736 4791 638008825 638008881 1.960000e-06 65.8
65 TraesCS7D01G498500 chr3D 79.336 542 84 22 4978 5505 49437214 49437741 1.040000e-93 355.0
66 TraesCS7D01G498500 chr3D 82.468 154 21 5 6659 6809 29471452 29471302 6.860000e-26 130.0
67 TraesCS7D01G498500 chr5A 81.683 404 54 16 4978 5373 638066313 638066704 1.360000e-82 318.0
68 TraesCS7D01G498500 chr5A 81.646 316 47 8 5067 5380 565665329 565665023 1.400000e-62 252.0
69 TraesCS7D01G498500 chr5A 85.246 122 8 6 4817 4937 590556058 590556170 5.340000e-22 117.0
70 TraesCS7D01G498500 chr1B 82.210 371 60 5 5808 6175 550957418 550957785 1.760000e-81 315.0
71 TraesCS7D01G498500 chr1B 80.863 371 34 13 7021 7357 101121915 101122282 3.010000e-64 257.0
72 TraesCS7D01G498500 chr1B 100.000 29 0 0 6976 7004 631835470 631835442 4.000000e-03 54.7
73 TraesCS7D01G498500 chr4B 82.210 371 52 7 5808 6175 63653277 63653636 2.950000e-79 307.0
74 TraesCS7D01G498500 chr4B 83.180 327 48 6 5808 6131 63686296 63686618 8.260000e-75 292.0
75 TraesCS7D01G498500 chr4B 86.567 67 6 3 1300 1365 71586869 71586805 4.210000e-08 71.3
76 TraesCS7D01G498500 chr2D 82.902 193 29 4 3878 4068 7399867 7400057 4.040000e-38 171.0
77 TraesCS7D01G498500 chr2D 83.582 134 17 4 4519 4647 359353670 359353537 4.130000e-23 121.0
78 TraesCS7D01G498500 chr2D 82.836 134 18 4 4519 4647 259430535 259430402 1.920000e-21 115.0
79 TraesCS7D01G498500 chr2D 87.500 48 6 0 3973 4020 370957103 370957150 1.000000e-03 56.5
80 TraesCS7D01G498500 chr6D 83.582 134 17 4 4519 4647 133519808 133519941 4.130000e-23 121.0
81 TraesCS7D01G498500 chr6D 83.582 134 17 4 4519 4647 225100743 225100876 4.130000e-23 121.0
82 TraesCS7D01G498500 chr5D 81.301 123 19 2 3226 3346 490772944 490772824 6.950000e-16 97.1
83 TraesCS7D01G498500 chr6B 95.238 42 2 0 1300 1341 622737734 622737693 5.450000e-07 67.6
84 TraesCS7D01G498500 chr6B 100.000 29 0 0 6976 7004 161339756 161339784 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G498500 chr7D 605143856 605152271 8415 False 7325.500000 14246 100.000000 1 8416 2 chr7D.!!$F3 8415
1 TraesCS7D01G498500 chr7D 604872662 604876352 3690 True 2443.950000 4800 92.844500 80 3682 2 chr7D.!!$R1 3602
2 TraesCS7D01G498500 chr7D 604958431 604961575 3144 True 2076.700000 4071 91.981500 80 3133 2 chr7D.!!$R3 3053
3 TraesCS7D01G498500 chr7D 604981152 604984253 3101 True 1281.000000 3109 86.409333 213 3682 3 chr7D.!!$R4 3469
4 TraesCS7D01G498500 chr7D 603823742 603825839 2097 False 1092.000000 1616 85.433000 1545 3682 2 chr7D.!!$F2 2137
5 TraesCS7D01G498500 chr7D 604889682 604892949 3267 True 953.750000 2058 88.407750 197 3682 4 chr7D.!!$R2 3485
6 TraesCS7D01G498500 chr7B 687417689 687422120 4431 True 2026.500000 3284 89.712000 214 3683 2 chr7B.!!$R3 3469
7 TraesCS7D01G498500 chr7B 687592594 687596118 3524 False 1278.000000 2900 89.661667 213 7694 3 chr7B.!!$F7 7481
8 TraesCS7D01G498500 chr7B 686153672 686156727 3055 False 1180.666667 2876 87.252333 321 3682 3 chr7B.!!$F6 3361
9 TraesCS7D01G498500 chr7A 696807957 696811059 3102 True 1680.000000 2940 86.846000 197 3682 2 chr7A.!!$R6 3485
10 TraesCS7D01G498500 chr7A 466518283 466520784 2501 False 1375.500000 1554 87.043000 3845 7367 2 chr7A.!!$F2 3522
11 TraesCS7D01G498500 chr4D 209912438 209914607 2169 False 736.500000 1258 78.526000 3684 5758 2 chr4D.!!$F2 2074
12 TraesCS7D01G498500 chr4D 424189926 424190662 736 False 422.000000 422 77.513000 5067 5805 1 chr4D.!!$F1 738
13 TraesCS7D01G498500 chr4D 448170567 448173649 3082 False 359.000000 420 79.652500 5067 6175 2 chr4D.!!$F3 1108
14 TraesCS7D01G498500 chr1D 63063679 63064671 992 False 821.000000 821 82.049000 3880 4879 1 chr1D.!!$F1 999
15 TraesCS7D01G498500 chr1D 63348028 63348933 905 False 612.000000 612 80.175000 6516 7357 1 chr1D.!!$F2 841
16 TraesCS7D01G498500 chr1D 63072200 63073069 869 False 422.000000 592 84.528000 4883 6060 2 chr1D.!!$F3 1177
17 TraesCS7D01G498500 chr1A 543179352 543180084 732 False 619.000000 619 82.148000 5055 5790 1 chr1A.!!$F1 735
18 TraesCS7D01G498500 chr2A 744925114 744926147 1033 True 509.500000 555 85.478000 4351 5758 2 chr2A.!!$R2 1407
19 TraesCS7D01G498500 chr2A 129471016 129471554 538 False 414.000000 414 80.797000 5068 5612 1 chr2A.!!$F1 544
20 TraesCS7D01G498500 chr2B 182869644 182870328 684 True 468.000000 468 79.856000 5808 6468 1 chr2B.!!$R2 660
21 TraesCS7D01G498500 chr3A 626723772 626726840 3068 False 334.000000 387 78.708500 5067 6175 2 chr3A.!!$F2 1108
22 TraesCS7D01G498500 chr3D 49437214 49437741 527 False 355.000000 355 79.336000 4978 5505 1 chr3D.!!$F1 527

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
40 41 3.449746 TTTGATGAGGGGAAAATCCGT 57.550 42.857 0.00 0.00 37.43 4.69 F
41 42 4.577988 TTTGATGAGGGGAAAATCCGTA 57.422 40.909 0.00 0.00 37.43 4.02 F
1436 2663 0.454452 TCAGATGAGTTCACGACGCG 60.454 55.000 3.53 3.53 0.00 6.01 F
1916 3162 0.368227 CGTTCGACATCAAGCTCTGC 59.632 55.000 0.00 0.00 0.00 4.26 F
3684 5193 0.104120 TGGACATCGTGGATAAGCGG 59.896 55.000 0.00 0.00 0.00 5.52 F
5034 6717 0.027848 GTCGACTAGTGCTACGCTCC 59.972 60.000 8.70 0.00 0.00 4.70 F
5389 7083 0.321653 CAAGAGGTACCCACACTGGC 60.322 60.000 8.74 0.00 35.79 4.85 F
5759 7464 0.392706 TCAGTGGAAGCGCTTCTTGA 59.607 50.000 40.11 34.47 39.45 3.02 F
6881 10605 0.663153 GCCTCTTGCGTTGTGTTCTT 59.337 50.000 0.00 0.00 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1418 2645 0.729478 ACGCGTCGTGAACTCATCTG 60.729 55.000 13.68 0.00 39.18 2.90 R
1601 2841 1.276138 TGTCGGATCACTGAGCACAAT 59.724 47.619 0.00 0.00 31.51 2.71 R
3411 4915 1.140312 TCAGTTCAGGGGAAAGCACT 58.860 50.000 0.00 0.00 34.13 4.40 R
3876 5403 0.041982 TAGGGTTGGGGAATTTGGGC 59.958 55.000 0.00 0.00 0.00 5.36 R
5069 6756 0.606604 GTCGCACTACTTCCCTCCAA 59.393 55.000 0.00 0.00 0.00 3.53 R
6860 10582 0.380378 GAACACAACGCAAGAGGCAA 59.620 50.000 0.00 0.00 45.17 4.52 R
7260 11055 0.335019 TAGTGGAGGCAGCTCAGGTA 59.665 55.000 0.00 0.00 0.00 3.08 R
7262 11057 0.685785 TCTAGTGGAGGCAGCTCAGG 60.686 60.000 0.00 0.00 0.00 3.86 R
8341 12151 0.036388 TGGATTTCTGCGTCCAGGAC 60.036 55.000 9.92 9.92 39.51 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 9.820725 TTATGGAATAAGCAAATTTTGATGAGG 57.179 29.630 13.26 0.00 32.95 3.86
30 31 6.642430 TGGAATAAGCAAATTTTGATGAGGG 58.358 36.000 13.26 0.00 0.00 4.30
31 32 6.051074 GGAATAAGCAAATTTTGATGAGGGG 58.949 40.000 13.26 0.00 0.00 4.79
32 33 6.127083 GGAATAAGCAAATTTTGATGAGGGGA 60.127 38.462 13.26 0.00 0.00 4.81
33 34 6.872585 ATAAGCAAATTTTGATGAGGGGAA 57.127 33.333 13.26 0.00 0.00 3.97
34 35 5.565455 AAGCAAATTTTGATGAGGGGAAA 57.435 34.783 13.26 0.00 0.00 3.13
35 36 5.565455 AGCAAATTTTGATGAGGGGAAAA 57.435 34.783 13.26 0.00 0.00 2.29
36 37 6.130692 AGCAAATTTTGATGAGGGGAAAAT 57.869 33.333 13.26 0.00 32.01 1.82
37 38 6.175471 AGCAAATTTTGATGAGGGGAAAATC 58.825 36.000 13.26 0.00 30.69 2.17
38 39 5.355071 GCAAATTTTGATGAGGGGAAAATCC 59.645 40.000 13.26 0.00 35.23 3.01
39 40 5.343307 AATTTTGATGAGGGGAAAATCCG 57.657 39.130 0.00 0.00 37.43 4.18
40 41 3.449746 TTTGATGAGGGGAAAATCCGT 57.550 42.857 0.00 0.00 37.43 4.69
41 42 4.577988 TTTGATGAGGGGAAAATCCGTA 57.422 40.909 0.00 0.00 37.43 4.02
42 43 4.577988 TTGATGAGGGGAAAATCCGTAA 57.422 40.909 0.00 0.00 37.43 3.18
43 44 4.577988 TGATGAGGGGAAAATCCGTAAA 57.422 40.909 0.00 0.00 37.43 2.01
44 45 4.924625 TGATGAGGGGAAAATCCGTAAAA 58.075 39.130 0.00 0.00 37.43 1.52
45 46 5.326069 TGATGAGGGGAAAATCCGTAAAAA 58.674 37.500 0.00 0.00 37.43 1.94
46 47 5.955355 TGATGAGGGGAAAATCCGTAAAAAT 59.045 36.000 0.00 0.00 37.43 1.82
47 48 6.439058 TGATGAGGGGAAAATCCGTAAAAATT 59.561 34.615 0.00 0.00 37.43 1.82
48 49 7.616150 TGATGAGGGGAAAATCCGTAAAAATTA 59.384 33.333 0.00 0.00 37.43 1.40
49 50 7.778185 TGAGGGGAAAATCCGTAAAAATTAA 57.222 32.000 0.00 0.00 37.43 1.40
50 51 8.191534 TGAGGGGAAAATCCGTAAAAATTAAA 57.808 30.769 0.00 0.00 37.43 1.52
51 52 8.648693 TGAGGGGAAAATCCGTAAAAATTAAAA 58.351 29.630 0.00 0.00 37.43 1.52
52 53 9.661563 GAGGGGAAAATCCGTAAAAATTAAAAT 57.338 29.630 0.00 0.00 37.43 1.82
81 82 7.770366 AAACCCTAGTTTCAAAAATCCGTAT 57.230 32.000 0.00 0.00 42.67 3.06
82 83 8.866970 AAACCCTAGTTTCAAAAATCCGTATA 57.133 30.769 0.00 0.00 42.67 1.47
83 84 9.470399 AAACCCTAGTTTCAAAAATCCGTATAT 57.530 29.630 0.00 0.00 42.67 0.86
358 451 7.239763 TCAGTACTGATGTCCTAAAATGTGA 57.760 36.000 21.74 0.00 34.14 3.58
437 530 7.167968 CAGGTTGTTGTTGAATATGACACAAAG 59.832 37.037 0.00 0.00 0.00 2.77
533 626 5.508200 TGTATCCAAAACAAGTTGGTGAC 57.492 39.130 7.96 4.52 46.93 3.67
643 736 7.559486 TCTAACATCTCACTTGCATTACTCAT 58.441 34.615 0.00 0.00 0.00 2.90
646 739 7.545362 ACATCTCACTTGCATTACTCATAAC 57.455 36.000 0.00 0.00 0.00 1.89
649 742 8.671921 CATCTCACTTGCATTACTCATAACTTT 58.328 33.333 0.00 0.00 0.00 2.66
764 963 9.529325 TGATAGTATCTATTTTCAACTGAACCG 57.471 33.333 11.40 0.00 33.13 4.44
900 2119 7.997107 TTTAATCTGCACGGTAACATAGTAG 57.003 36.000 0.00 0.00 0.00 2.57
1414 2641 8.475331 AACATGAGTGTATAAGTTAGGTTTCG 57.525 34.615 0.00 0.00 37.67 3.46
1418 2645 6.755141 TGAGTGTATAAGTTAGGTTTCGCATC 59.245 38.462 0.00 0.00 0.00 3.91
1436 2663 0.454452 TCAGATGAGTTCACGACGCG 60.454 55.000 3.53 3.53 0.00 6.01
1437 2664 0.729478 CAGATGAGTTCACGACGCGT 60.729 55.000 13.85 13.85 42.36 6.01
1444 2671 1.400846 AGTTCACGACGCGTCATCTAT 59.599 47.619 35.71 15.88 38.32 1.98
1446 2673 2.554806 TCACGACGCGTCATCTATTT 57.445 45.000 35.71 10.02 38.32 1.40
1448 2675 3.247442 TCACGACGCGTCATCTATTTTT 58.753 40.909 35.71 7.64 38.32 1.94
1449 2676 4.413969 TCACGACGCGTCATCTATTTTTA 58.586 39.130 35.71 8.37 38.32 1.52
1450 2677 4.263677 TCACGACGCGTCATCTATTTTTAC 59.736 41.667 35.71 7.84 38.32 2.01
1453 2680 4.947933 CGACGCGTCATCTATTTTTACAAC 59.052 41.667 35.71 6.32 0.00 3.32
1454 2681 5.443562 CGACGCGTCATCTATTTTTACAACA 60.444 40.000 35.71 0.00 0.00 3.33
1455 2682 6.417191 ACGCGTCATCTATTTTTACAACAT 57.583 33.333 5.58 0.00 0.00 2.71
1456 2683 7.513969 CGACGCGTCATCTATTTTTACAACATA 60.514 37.037 35.71 0.00 0.00 2.29
1457 2684 8.138365 ACGCGTCATCTATTTTTACAACATAT 57.862 30.769 5.58 0.00 0.00 1.78
1458 2685 8.609176 ACGCGTCATCTATTTTTACAACATATT 58.391 29.630 5.58 0.00 0.00 1.28
1459 2686 9.092322 CGCGTCATCTATTTTTACAACATATTC 57.908 33.333 0.00 0.00 0.00 1.75
1460 2687 9.092322 GCGTCATCTATTTTTACAACATATTCG 57.908 33.333 0.00 0.00 0.00 3.34
1461 2688 9.092322 CGTCATCTATTTTTACAACATATTCGC 57.908 33.333 0.00 0.00 0.00 4.70
1462 2689 9.382244 GTCATCTATTTTTACAACATATTCGCC 57.618 33.333 0.00 0.00 0.00 5.54
1463 2690 9.114952 TCATCTATTTTTACAACATATTCGCCA 57.885 29.630 0.00 0.00 0.00 5.69
1464 2691 9.729023 CATCTATTTTTACAACATATTCGCCAA 57.271 29.630 0.00 0.00 0.00 4.52
1567 2806 6.034898 GCCATTTTACCATTCATTCAACTTCG 59.965 38.462 0.00 0.00 0.00 3.79
1601 2841 7.759489 AAAGACATTAACCATTTCAGCTGTA 57.241 32.000 14.67 0.00 0.00 2.74
1643 2883 7.483691 CGACAATTTATGTTTTTGTAGGTAGCC 59.516 37.037 0.00 0.00 44.12 3.93
1768 3014 6.992063 AGCATATTACTCTGTTGGTTTCAG 57.008 37.500 0.00 0.00 0.00 3.02
1776 3022 4.141390 ACTCTGTTGGTTTCAGGTCTGATT 60.141 41.667 1.16 0.00 39.64 2.57
1788 3034 4.286808 TCAGGTCTGATTGGAGAATCACAA 59.713 41.667 0.00 0.00 42.56 3.33
1796 3042 3.159213 TGGAGAATCACAACCTTGCAT 57.841 42.857 0.00 0.00 36.25 3.96
1812 3058 4.687948 CCTTGCATCTGGACATACTAATCG 59.312 45.833 0.00 0.00 0.00 3.34
1916 3162 0.368227 CGTTCGACATCAAGCTCTGC 59.632 55.000 0.00 0.00 0.00 4.26
1994 3240 7.118971 GGATCTTTTATCGCTGAAGCTATCATT 59.881 37.037 0.10 0.00 37.44 2.57
2040 3286 4.036852 CACTCGATGCTAATAGTGTCAGGA 59.963 45.833 0.00 0.00 35.66 3.86
2143 3389 9.717942 GCATTCTATCTTTGATAGGTTACTCAT 57.282 33.333 12.81 0.00 0.00 2.90
2207 3453 4.254709 AGCTGCACCAAGTGGCGA 62.255 61.111 1.02 0.00 39.32 5.54
2438 3686 2.959516 CGTGTTCTTCAGGCTGATACA 58.040 47.619 19.50 18.61 0.00 2.29
2615 3864 6.158598 TGCTTTGATTGCTCAGGTTATTTTC 58.841 36.000 0.00 0.00 31.68 2.29
2645 3896 4.843728 TCCTCTGGGTTTTTATGCTACAG 58.156 43.478 0.00 0.00 0.00 2.74
2780 4079 4.090090 GCCTAGAATCCAGCACCTATCTA 58.910 47.826 0.00 0.00 0.00 1.98
2841 4140 6.701340 TCTGCTAAATGTCAATCACACTAGT 58.299 36.000 0.00 0.00 38.04 2.57
2884 4211 8.944138 TGGATGGGATATTGTGATACTTTTCTA 58.056 33.333 0.00 0.00 0.00 2.10
3033 4363 4.462483 GCCAGGTTTGAGATATTTTCCACA 59.538 41.667 0.00 0.00 0.00 4.17
3184 4685 8.272173 TGATGGCATCACATATTCATATCTGAT 58.728 33.333 25.63 0.00 31.34 2.90
3185 4686 8.678593 ATGGCATCACATATTCATATCTGATC 57.321 34.615 0.00 0.00 29.56 2.92
3194 4695 9.119418 ACATATTCATATCTGATCTCTCTACCG 57.881 37.037 0.00 0.00 0.00 4.02
3411 4915 8.523915 TTCGTCAAAAGGTATGTAGTAGGATA 57.476 34.615 0.00 0.00 0.00 2.59
3421 4925 5.810080 ATGTAGTAGGATAGTGCTTTCCC 57.190 43.478 5.30 0.00 32.05 3.97
3683 5192 1.934589 TTGGACATCGTGGATAAGCG 58.065 50.000 0.00 0.00 0.00 4.68
3684 5193 0.104120 TGGACATCGTGGATAAGCGG 59.896 55.000 0.00 0.00 0.00 5.52
3685 5194 0.600255 GGACATCGTGGATAAGCGGG 60.600 60.000 0.00 0.00 0.00 6.13
3686 5195 0.387929 GACATCGTGGATAAGCGGGA 59.612 55.000 0.00 0.00 0.00 5.14
3687 5196 0.389391 ACATCGTGGATAAGCGGGAG 59.611 55.000 0.00 0.00 0.00 4.30
3707 5216 6.255887 CGGGAGCTACTACAATAGAAAAACAG 59.744 42.308 0.00 0.00 0.00 3.16
3711 5220 6.371825 AGCTACTACAATAGAAAAACAGCCAC 59.628 38.462 0.00 0.00 0.00 5.01
3712 5221 5.959618 ACTACAATAGAAAAACAGCCACC 57.040 39.130 0.00 0.00 0.00 4.61
3717 5226 1.892209 AGAAAAACAGCCACCGGTAG 58.108 50.000 6.87 0.00 0.00 3.18
3753 5262 3.562182 TCTATATGAGCCGTCAGTTCCA 58.438 45.455 0.00 0.00 35.66 3.53
3819 5328 1.594397 GCTGGCTTCTTTGCACAAAAC 59.406 47.619 0.00 0.00 34.04 2.43
3820 5329 2.739609 GCTGGCTTCTTTGCACAAAACT 60.740 45.455 0.00 0.00 34.04 2.66
3824 5333 2.101415 GCTTCTTTGCACAAAACTCCCT 59.899 45.455 0.00 0.00 0.00 4.20
3830 5339 2.297701 TGCACAAAACTCCCTCACTTC 58.702 47.619 0.00 0.00 0.00 3.01
3835 5344 5.368989 CACAAAACTCCCTCACTTCTACTT 58.631 41.667 0.00 0.00 0.00 2.24
3836 5345 6.522054 CACAAAACTCCCTCACTTCTACTTA 58.478 40.000 0.00 0.00 0.00 2.24
3840 5349 9.720769 CAAAACTCCCTCACTTCTACTTATTTA 57.279 33.333 0.00 0.00 0.00 1.40
3841 5350 9.722184 AAAACTCCCTCACTTCTACTTATTTAC 57.278 33.333 0.00 0.00 0.00 2.01
3844 5353 7.342541 ACTCCCTCACTTCTACTTATTTACCTC 59.657 40.741 0.00 0.00 0.00 3.85
3847 5356 7.419204 CCTCACTTCTACTTATTTACCTCTCG 58.581 42.308 0.00 0.00 0.00 4.04
3850 5359 8.887717 TCACTTCTACTTATTTACCTCTCGTAC 58.112 37.037 0.00 0.00 0.00 3.67
3857 5384 4.762956 ATTTACCTCTCGTACCGATAGC 57.237 45.455 0.00 0.00 34.61 2.97
3859 5386 1.307097 ACCTCTCGTACCGATAGCAC 58.693 55.000 0.00 0.00 34.61 4.40
3906 5434 0.036765 CCAACCCTAGCTTGCGTACA 60.037 55.000 0.00 0.00 0.00 2.90
3931 5459 0.835941 CCTCCTGGACCAATCCTCTG 59.164 60.000 0.00 0.00 46.43 3.35
3946 5474 0.749649 CTCTGGTCCATCTTCCTCCG 59.250 60.000 0.00 0.00 0.00 4.63
4023 5551 2.593956 GGAGGTCCCGTTCCAGCTT 61.594 63.158 0.00 0.00 33.55 3.74
4035 5563 1.328279 TCCAGCTTCTGTTCGTCTCA 58.672 50.000 0.00 0.00 0.00 3.27
4081 5609 1.682394 GGACCTCGCTCTGTCCTAAGA 60.682 57.143 7.83 0.00 46.13 2.10
4105 5633 5.308237 AGAACAAGAACTGGATGGTACTCTT 59.692 40.000 0.00 0.00 0.00 2.85
4137 5665 3.782443 GGTCGACCTCGCCCCATT 61.782 66.667 27.64 0.00 39.60 3.16
4226 5775 4.414337 ACTCCAATCTGAAGGTATGCTC 57.586 45.455 0.31 0.00 0.00 4.26
4490 6157 2.650322 AGCTTGGAACGGTTTTTGAGA 58.350 42.857 0.00 0.00 0.00 3.27
4497 6164 4.116238 GGAACGGTTTTTGAGAAAATGCA 58.884 39.130 0.00 0.00 37.12 3.96
4556 6223 1.202580 CCCACTAGCAGGACACTATGC 60.203 57.143 3.46 0.00 42.87 3.14
4696 6373 7.489160 TCACCTGTGATACATGTCAACTATAC 58.511 38.462 0.00 0.00 34.14 1.47
4722 6400 6.597672 TGCAAATCCTGGTTAGTATGTACTTG 59.402 38.462 0.00 0.00 37.73 3.16
4737 6415 0.947244 ACTTGCACTTTTCTGAGCCG 59.053 50.000 0.00 0.00 0.00 5.52
4778 6457 8.041323 GGAGAGACCTTTATCAGTGTTCATTTA 58.959 37.037 0.00 0.00 35.41 1.40
4783 6462 8.281212 ACCTTTATCAGTGTTCATTTACCATC 57.719 34.615 0.00 0.00 0.00 3.51
4814 6494 1.247567 AATTCTGCAAACTCACCGGG 58.752 50.000 6.32 0.00 0.00 5.73
4875 6558 0.782384 GTACCTGAACGTGAAGTGCG 59.218 55.000 0.00 0.00 0.00 5.34
4880 6563 1.793613 GAACGTGAAGTGCGCATGC 60.794 57.895 15.91 7.91 43.20 4.06
4904 6587 6.899393 AGGCACAAGACTGAAATTTATTCA 57.101 33.333 0.00 0.00 0.00 2.57
4906 6589 7.899973 AGGCACAAGACTGAAATTTATTCAAT 58.100 30.769 0.00 0.00 0.00 2.57
5034 6717 0.027848 GTCGACTAGTGCTACGCTCC 59.972 60.000 8.70 0.00 0.00 4.70
5041 6727 1.153901 GTGCTACGCTCCGCAACTA 60.154 57.895 0.00 0.00 37.97 2.24
5147 6835 4.826274 AACTGTGTACCAGCACTATCAT 57.174 40.909 10.26 0.00 45.68 2.45
5255 6948 2.418368 TATTTGCAGCCGTGGAATCT 57.582 45.000 0.00 0.00 33.47 2.40
5300 6993 4.400529 TTTCAGCGATGCTACCTCATTA 57.599 40.909 0.00 0.00 36.40 1.90
5389 7083 0.321653 CAAGAGGTACCCACACTGGC 60.322 60.000 8.74 0.00 35.79 4.85
5439 7137 7.497925 CCTTGAATAAGGCCAATAGTAGTTC 57.502 40.000 5.01 0.00 46.47 3.01
5462 7161 9.264782 GTTCAATTTTGTCTGTTTCAAATTGTG 57.735 29.630 13.24 3.38 35.25 3.33
5465 7164 9.053135 CAATTTTGTCTGTTTCAAATTGTGTTG 57.947 29.630 7.68 0.00 35.25 3.33
5469 7170 7.114882 TGTCTGTTTCAAATTGTGTTGTTTG 57.885 32.000 0.00 0.00 36.82 2.93
5473 7174 7.225538 TCTGTTTCAAATTGTGTTGTTTGTTGT 59.774 29.630 0.00 0.00 36.83 3.32
5474 7175 7.128331 TGTTTCAAATTGTGTTGTTTGTTGTG 58.872 30.769 0.00 0.00 36.83 3.33
5476 7177 7.664082 TTCAAATTGTGTTGTTTGTTGTGAT 57.336 28.000 0.00 0.00 36.83 3.06
5507 7209 7.871463 TGAGATCTCATAAGTGAATAGCATGTG 59.129 37.037 21.67 0.00 34.14 3.21
5521 7225 3.412386 AGCATGTGGTCTTTACAAGTCC 58.588 45.455 0.00 0.00 37.25 3.85
5528 7232 6.170506 TGTGGTCTTTACAAGTCCATATGAC 58.829 40.000 3.65 0.79 45.89 3.06
5573 7277 4.917415 CAGTGGTACTAAACTTGCAATTGC 59.083 41.667 23.69 23.69 42.50 3.56
5612 7316 0.393820 TAAACCCCCAGTGTGACGAC 59.606 55.000 0.00 0.00 0.00 4.34
5666 7370 5.952347 TGATGATATTGGCTCGGTACTAGAT 59.048 40.000 0.00 0.00 0.00 1.98
5682 7386 9.760077 CGGTACTAGATTTTTACAGGACATATT 57.240 33.333 0.00 0.00 0.00 1.28
5694 7399 5.972935 ACAGGACATATTACACGATGTTGA 58.027 37.500 0.00 0.00 36.42 3.18
5728 7433 4.202010 CGTCTTGGACAACAAAAGGTCATT 60.202 41.667 0.00 0.00 38.91 2.57
5759 7464 0.392706 TCAGTGGAAGCGCTTCTTGA 59.607 50.000 40.11 34.47 39.45 3.02
5760 7465 1.202639 TCAGTGGAAGCGCTTCTTGAA 60.203 47.619 40.11 24.68 39.45 2.69
5771 7476 2.916111 GCTTCTTGAATGCGAACGAAA 58.084 42.857 0.00 0.00 0.00 3.46
5798 7503 4.495422 TCGTCCTGAGAAAGATAACTTGC 58.505 43.478 0.00 0.00 36.39 4.01
5799 7504 4.021456 TCGTCCTGAGAAAGATAACTTGCA 60.021 41.667 0.00 0.00 36.39 4.08
5800 7505 4.690748 CGTCCTGAGAAAGATAACTTGCAA 59.309 41.667 0.00 0.00 36.39 4.08
5801 7506 5.352569 CGTCCTGAGAAAGATAACTTGCAAT 59.647 40.000 0.00 0.00 36.39 3.56
5803 7508 7.025963 GTCCTGAGAAAGATAACTTGCAATTG 58.974 38.462 0.00 0.00 36.39 2.32
5804 7509 6.942005 TCCTGAGAAAGATAACTTGCAATTGA 59.058 34.615 10.34 0.00 36.39 2.57
5805 7510 7.613022 TCCTGAGAAAGATAACTTGCAATTGAT 59.387 33.333 10.34 0.00 36.39 2.57
5806 7511 7.701078 CCTGAGAAAGATAACTTGCAATTGATG 59.299 37.037 10.34 0.34 36.39 3.07
5847 9524 2.163010 GTGGTGTTCCATGATGCAAGAG 59.837 50.000 0.00 0.00 46.20 2.85
5872 9549 6.586844 GCATACTCTAAGAAAGAAACGACACT 59.413 38.462 0.00 0.00 32.46 3.55
5873 9550 7.410942 GCATACTCTAAGAAAGAAACGACACTG 60.411 40.741 0.00 0.00 32.46 3.66
5874 9551 5.903810 ACTCTAAGAAAGAAACGACACTGT 58.096 37.500 0.00 0.00 32.46 3.55
5884 9561 5.555017 AGAAACGACACTGTAGTAGAGGTA 58.445 41.667 0.00 0.00 0.00 3.08
5903 9580 3.181516 GGTATGTGCTTCTTCTTGCTTCG 60.182 47.826 0.00 0.00 0.00 3.79
5917 9594 4.521639 TCTTGCTTCGAAGACTACCACTTA 59.478 41.667 28.95 1.41 34.32 2.24
5932 9610 7.552459 ACTACCACTTATTTGTTTTGCTTTGT 58.448 30.769 0.00 0.00 0.00 2.83
5935 9613 6.756542 ACCACTTATTTGTTTTGCTTTGTCTC 59.243 34.615 0.00 0.00 0.00 3.36
6001 9683 5.380043 ACCCAAGATATGTATGCCTTTCAG 58.620 41.667 0.00 0.00 0.00 3.02
6014 9696 2.310538 CCTTTCAGTTTGACTGGCCTT 58.689 47.619 3.32 0.00 45.94 4.35
6063 9750 8.648557 TGTGATTTAGTATCAATCCTTCTTCG 57.351 34.615 0.00 0.00 30.64 3.79
6071 9758 7.504403 AGTATCAATCCTTCTTCGATGACATT 58.496 34.615 0.00 0.00 0.00 2.71
6083 9770 5.728637 TCGATGACATTAGCATATCTGGT 57.271 39.130 0.00 0.00 36.89 4.00
6092 9779 9.277783 GACATTAGCATATCTGGTATCTTGTTT 57.722 33.333 0.00 0.00 35.40 2.83
6124 9814 5.856126 TTCCTGTGCTATTGTAGTTTTCG 57.144 39.130 0.00 0.00 0.00 3.46
6126 9816 6.028146 TCCTGTGCTATTGTAGTTTTCGTA 57.972 37.500 0.00 0.00 0.00 3.43
6193 9903 9.143155 TGTTTATAATCTGCATCTGTAGGACTA 57.857 33.333 0.00 0.00 0.00 2.59
6201 9911 8.427902 TCTGCATCTGTAGGACTATCATAAAT 57.572 34.615 0.00 0.00 0.00 1.40
6228 9938 6.598064 TCCCTTTAAATTTCTCGATGTCCTTC 59.402 38.462 0.00 0.00 0.00 3.46
6230 9940 7.769044 CCCTTTAAATTTCTCGATGTCCTTCTA 59.231 37.037 0.00 0.00 0.00 2.10
6240 9950 6.605995 TCTCGATGTCCTTCTATTTGTCCTTA 59.394 38.462 0.00 0.00 0.00 2.69
6303 10013 2.965147 TGATCGGAAGTCTATGCATGGA 59.035 45.455 8.93 8.93 0.00 3.41
6316 10026 1.355971 GCATGGATGTGCAAGCTTTG 58.644 50.000 0.00 0.00 44.43 2.77
6340 10050 1.139853 CCCTGTGAATCTGGAGCCTAC 59.860 57.143 0.00 0.00 37.33 3.18
6384 10096 3.385433 CCAGATAGATTTTTGCATGCCCA 59.615 43.478 16.68 0.00 0.00 5.36
6390 10102 1.307097 TTTTTGCATGCCCAGTTTGC 58.693 45.000 16.68 0.00 36.91 3.68
6436 10148 5.834281 TTTACATATGCCATGGCCTACTA 57.166 39.130 33.44 19.00 41.09 1.82
6468 10180 8.255206 TCCGAACAATAACTATTGAGCTCTTTA 58.745 33.333 16.19 5.70 44.40 1.85
6481 10193 6.360370 TGAGCTCTTTATTAGGTCAGTTGT 57.640 37.500 16.19 0.00 44.26 3.32
6493 10205 1.069049 GTCAGTTGTGGCAAATGGCTT 59.931 47.619 8.50 0.00 44.01 4.35
6499 10211 4.586841 AGTTGTGGCAAATGGCTTAAAGTA 59.413 37.500 8.50 0.00 44.01 2.24
6575 10287 4.460263 GTTATGTATCATGGGTTGGAGCA 58.540 43.478 0.00 0.00 0.00 4.26
6601 10313 2.236146 ACGAAGCTGGACATAATGACCA 59.764 45.455 0.00 0.00 39.73 4.02
6604 10316 1.915489 AGCTGGACATAATGACCACCA 59.085 47.619 0.00 0.00 37.28 4.17
6625 10337 6.038161 CACCACTCTTCTCAAAATGTGTTGTA 59.962 38.462 0.00 0.00 0.00 2.41
6689 10401 5.308497 TCTGTGGTTAACTAGGTGGATTGAA 59.692 40.000 5.42 0.00 0.00 2.69
6754 10473 5.674525 TCCAACAGATGAAAGCTCGATTAT 58.325 37.500 0.00 0.00 0.00 1.28
6870 10594 8.652810 AAAAATGATATATGTTTGCCTCTTGC 57.347 30.769 0.00 0.00 41.77 4.01
6881 10605 0.663153 GCCTCTTGCGTTGTGTTCTT 59.337 50.000 0.00 0.00 0.00 2.52
6912 10636 5.700832 TCAAATACTCGAATGCTTGTTGAGT 59.299 36.000 8.99 8.99 42.22 3.41
6937 10682 7.416964 AGTGATAACTTACTCAGATGCTTCT 57.583 36.000 0.00 0.00 0.00 2.85
6945 10690 8.299990 ACTTACTCAGATGCTTCTAGTTACAT 57.700 34.615 1.16 0.00 0.00 2.29
6946 10691 8.194104 ACTTACTCAGATGCTTCTAGTTACATG 58.806 37.037 1.16 0.00 0.00 3.21
6948 10693 7.646548 ACTCAGATGCTTCTAGTTACATGTA 57.353 36.000 0.08 0.08 0.00 2.29
6949 10694 8.067751 ACTCAGATGCTTCTAGTTACATGTAA 57.932 34.615 14.35 14.35 0.00 2.41
7082 10848 0.758123 GAAGAGGAGAGGGGCATCAG 59.242 60.000 0.00 0.00 0.00 2.90
7085 10851 3.474570 GGAGAGGGGCATCAGCGT 61.475 66.667 0.00 0.00 43.41 5.07
7086 10852 2.586792 GAGAGGGGCATCAGCGTT 59.413 61.111 0.00 0.00 43.41 4.84
7177 10970 9.325198 GGTTTGAAAAATAGTCAAGGACAAAAT 57.675 29.630 0.00 0.00 36.41 1.82
7251 11046 6.803366 TCTAAGTAGTATCAGGGGGTTTTC 57.197 41.667 0.00 0.00 0.00 2.29
7252 11047 6.266080 TCTAAGTAGTATCAGGGGGTTTTCA 58.734 40.000 0.00 0.00 0.00 2.69
7253 11048 6.906901 TCTAAGTAGTATCAGGGGGTTTTCAT 59.093 38.462 0.00 0.00 0.00 2.57
7254 11049 5.373812 AGTAGTATCAGGGGGTTTTCATG 57.626 43.478 0.00 0.00 0.00 3.07
7255 11050 5.036916 AGTAGTATCAGGGGGTTTTCATGA 58.963 41.667 0.00 0.00 0.00 3.07
7260 11055 4.402616 TCAGGGGGTTTTCATGAAATCT 57.597 40.909 21.10 10.97 0.00 2.40
7261 11056 5.528600 TCAGGGGGTTTTCATGAAATCTA 57.471 39.130 21.10 4.34 0.00 1.98
7262 11057 5.261216 TCAGGGGGTTTTCATGAAATCTAC 58.739 41.667 21.10 15.73 0.00 2.59
7264 11059 4.294970 AGGGGGTTTTCATGAAATCTACCT 59.705 41.667 27.67 25.78 33.68 3.08
7265 11060 4.402474 GGGGGTTTTCATGAAATCTACCTG 59.598 45.833 27.67 0.00 32.22 4.00
7266 11061 5.261216 GGGGTTTTCATGAAATCTACCTGA 58.739 41.667 27.67 9.74 32.22 3.86
7267 11062 5.358160 GGGGTTTTCATGAAATCTACCTGAG 59.642 44.000 27.67 0.00 32.22 3.35
7287 11092 1.484240 GCTGCCTCCACTAGAATCTGT 59.516 52.381 0.00 0.00 0.00 3.41
7367 11173 4.404073 CCCAGATTCTACACTAGTTGCTCT 59.596 45.833 0.00 0.00 0.00 4.09
7368 11174 5.594725 CCCAGATTCTACACTAGTTGCTCTA 59.405 44.000 0.00 0.00 0.00 2.43
7369 11175 6.096987 CCCAGATTCTACACTAGTTGCTCTAA 59.903 42.308 0.00 0.00 0.00 2.10
7370 11176 7.199766 CCAGATTCTACACTAGTTGCTCTAAG 58.800 42.308 0.00 0.00 0.00 2.18
7371 11177 7.147983 CCAGATTCTACACTAGTTGCTCTAAGT 60.148 40.741 0.00 0.00 0.00 2.24
7372 11178 7.700234 CAGATTCTACACTAGTTGCTCTAAGTG 59.300 40.741 0.00 7.87 35.71 3.16
7391 11197 3.640967 AGTGCCTAGAAAGCCTATCTGAG 59.359 47.826 0.00 0.00 0.00 3.35
7412 11218 4.426112 CAGTCTCGAGCTGCGGCA 62.426 66.667 21.93 1.29 41.70 5.69
7439 11245 1.375523 GATTCCGGTGCCGTCAACT 60.376 57.895 9.90 0.00 37.81 3.16
7474 11284 1.064803 GGTGTGATCGTGTTGTGCAAA 59.935 47.619 0.00 0.00 0.00 3.68
7498 11308 3.692101 TCGAATGGTAAATTGCGGACATT 59.308 39.130 0.00 0.00 0.00 2.71
7504 11314 5.885881 TGGTAAATTGCGGACATTATGTTC 58.114 37.500 0.00 0.00 0.00 3.18
7505 11315 5.416013 TGGTAAATTGCGGACATTATGTTCA 59.584 36.000 4.37 0.00 0.00 3.18
7508 11318 6.949578 AAATTGCGGACATTATGTTCAAAG 57.050 33.333 4.37 0.00 0.00 2.77
7621 11431 7.955918 AGTCAGGTTTTCTCTTTAAAATGCAT 58.044 30.769 0.00 0.00 31.43 3.96
7694 11504 2.559231 AGTCGACTTGGGAAGAGAAGAC 59.441 50.000 13.58 0.00 0.00 3.01
7695 11505 1.540267 TCGACTTGGGAAGAGAAGACG 59.460 52.381 0.00 0.00 38.26 4.18
7696 11506 1.540267 CGACTTGGGAAGAGAAGACGA 59.460 52.381 0.00 0.00 38.90 4.20
7697 11507 2.668834 CGACTTGGGAAGAGAAGACGAC 60.669 54.545 0.00 0.00 38.90 4.34
7698 11508 1.269998 ACTTGGGAAGAGAAGACGACG 59.730 52.381 0.00 0.00 0.00 5.12
7699 11509 0.038526 TTGGGAAGAGAAGACGACGC 60.039 55.000 0.00 0.00 0.00 5.19
7700 11510 1.153804 GGGAAGAGAAGACGACGCC 60.154 63.158 0.00 0.00 0.00 5.68
7701 11511 1.514443 GGAAGAGAAGACGACGCCG 60.514 63.158 0.00 0.00 42.50 6.46
7711 11521 2.430244 CGACGCCGTGTTGCTAGT 60.430 61.111 0.00 0.00 0.00 2.57
7712 11522 2.716828 CGACGCCGTGTTGCTAGTG 61.717 63.158 0.00 0.00 0.00 2.74
7713 11523 2.357034 ACGCCGTGTTGCTAGTGG 60.357 61.111 0.00 0.00 0.00 4.00
8214 12024 3.013932 AGAGGAGGCTTGGGCAGG 61.014 66.667 0.00 0.00 40.87 4.85
8215 12025 4.120755 GAGGAGGCTTGGGCAGGG 62.121 72.222 0.00 0.00 40.87 4.45
8217 12027 4.748144 GGAGGCTTGGGCAGGGTG 62.748 72.222 0.00 0.00 40.87 4.61
8218 12028 4.748144 GAGGCTTGGGCAGGGTGG 62.748 72.222 0.00 0.00 40.87 4.61
8267 12077 4.446413 CCGCGGGTGTAGGTGGTC 62.446 72.222 20.10 0.00 0.00 4.02
8268 12078 4.789075 CGCGGGTGTAGGTGGTCG 62.789 72.222 0.00 0.00 0.00 4.79
8270 12080 4.446413 CGGGTGTAGGTGGTCGCC 62.446 72.222 0.00 0.00 0.00 5.54
8271 12081 3.315949 GGGTGTAGGTGGTCGCCA 61.316 66.667 3.23 0.00 36.11 5.69
8272 12082 2.745037 GGTGTAGGTGGTCGCCAA 59.255 61.111 3.23 0.00 34.18 4.52
8273 12083 1.071814 GGTGTAGGTGGTCGCCAAA 59.928 57.895 3.23 0.00 34.18 3.28
8274 12084 0.953960 GGTGTAGGTGGTCGCCAAAG 60.954 60.000 3.23 0.00 34.18 2.77
8275 12085 0.250166 GTGTAGGTGGTCGCCAAAGT 60.250 55.000 3.23 0.00 34.18 2.66
8276 12086 0.470766 TGTAGGTGGTCGCCAAAGTT 59.529 50.000 3.23 0.00 34.18 2.66
8277 12087 0.872388 GTAGGTGGTCGCCAAAGTTG 59.128 55.000 3.23 0.00 34.18 3.16
8278 12088 0.759959 TAGGTGGTCGCCAAAGTTGA 59.240 50.000 3.23 0.00 34.18 3.18
8279 12089 0.535102 AGGTGGTCGCCAAAGTTGAG 60.535 55.000 3.23 0.00 34.18 3.02
8280 12090 1.282875 GTGGTCGCCAAAGTTGAGC 59.717 57.895 0.00 0.00 34.18 4.26
8281 12091 1.153066 TGGTCGCCAAAGTTGAGCA 60.153 52.632 0.00 0.00 37.75 4.26
8282 12092 0.749818 TGGTCGCCAAAGTTGAGCAA 60.750 50.000 0.00 0.00 37.21 3.91
8283 12093 0.317854 GGTCGCCAAAGTTGAGCAAC 60.318 55.000 5.24 5.24 41.45 4.17
8302 12112 9.944376 TGAGCAACTAGATATGTTTTTACTTCT 57.056 29.630 0.00 0.00 0.00 2.85
8305 12115 9.690434 GCAACTAGATATGTTTTTACTTCTTCG 57.310 33.333 0.00 0.00 0.00 3.79
8321 12131 7.899648 ACTTCTTCGGAAAATAGATAGAGGA 57.100 36.000 0.00 0.00 33.12 3.71
8322 12132 8.307582 ACTTCTTCGGAAAATAGATAGAGGAA 57.692 34.615 0.00 0.00 33.12 3.36
8323 12133 8.198778 ACTTCTTCGGAAAATAGATAGAGGAAC 58.801 37.037 0.00 0.00 33.12 3.62
8324 12134 8.417884 CTTCTTCGGAAAATAGATAGAGGAACT 58.582 37.037 0.00 0.00 35.44 3.01
8325 12135 8.991783 TCTTCGGAAAATAGATAGAGGAACTA 57.008 34.615 0.00 0.00 41.55 2.24
8326 12136 9.069082 TCTTCGGAAAATAGATAGAGGAACTAG 57.931 37.037 0.00 0.00 41.55 2.57
8327 12137 8.991783 TTCGGAAAATAGATAGAGGAACTAGA 57.008 34.615 0.00 0.00 41.55 2.43
8328 12138 9.589461 TTCGGAAAATAGATAGAGGAACTAGAT 57.411 33.333 0.00 0.00 41.55 1.98
8336 12146 7.938140 AGATAGAGGAACTAGATATGAGTGC 57.062 40.000 0.00 0.00 41.55 4.40
8337 12147 6.597672 AGATAGAGGAACTAGATATGAGTGCG 59.402 42.308 0.00 0.00 41.55 5.34
8338 12148 3.823873 AGAGGAACTAGATATGAGTGCGG 59.176 47.826 0.00 0.00 41.55 5.69
8339 12149 2.297597 AGGAACTAGATATGAGTGCGGC 59.702 50.000 0.00 0.00 36.02 6.53
8340 12150 2.610727 GGAACTAGATATGAGTGCGGCC 60.611 54.545 0.00 0.00 0.00 6.13
8341 12151 0.598562 ACTAGATATGAGTGCGGCCG 59.401 55.000 24.05 24.05 0.00 6.13
8342 12152 0.598562 CTAGATATGAGTGCGGCCGT 59.401 55.000 28.70 6.76 0.00 5.68
8343 12153 0.596577 TAGATATGAGTGCGGCCGTC 59.403 55.000 28.70 19.46 0.00 4.79
8344 12154 1.664965 GATATGAGTGCGGCCGTCC 60.665 63.158 28.70 17.50 0.00 4.79
8345 12155 2.088674 GATATGAGTGCGGCCGTCCT 62.089 60.000 28.70 22.22 0.00 3.85
8346 12156 2.369257 ATATGAGTGCGGCCGTCCTG 62.369 60.000 28.70 0.00 0.00 3.86
8359 12169 2.768834 GTCCTGGACGCAGAAATCC 58.231 57.895 11.71 0.00 35.37 3.01
8360 12170 0.036388 GTCCTGGACGCAGAAATCCA 60.036 55.000 11.71 0.00 42.88 3.41
8362 12172 4.301505 TGGACGCAGAAATCCAGC 57.698 55.556 0.00 0.00 40.17 4.85
8363 12173 1.377202 TGGACGCAGAAATCCAGCC 60.377 57.895 0.00 0.00 40.17 4.85
8364 12174 1.377202 GGACGCAGAAATCCAGCCA 60.377 57.895 0.00 0.00 34.87 4.75
8365 12175 1.648467 GGACGCAGAAATCCAGCCAC 61.648 60.000 0.00 0.00 34.87 5.01
8366 12176 1.648467 GACGCAGAAATCCAGCCACC 61.648 60.000 0.00 0.00 0.00 4.61
8367 12177 1.377725 CGCAGAAATCCAGCCACCT 60.378 57.895 0.00 0.00 0.00 4.00
8368 12178 1.651240 CGCAGAAATCCAGCCACCTG 61.651 60.000 0.00 0.00 38.85 4.00
8369 12179 1.941999 GCAGAAATCCAGCCACCTGC 61.942 60.000 0.00 0.00 39.88 4.85
8383 12193 2.749044 CTGCTGCGCCAAGGTGAT 60.749 61.111 4.18 0.00 0.00 3.06
8384 12194 3.047718 CTGCTGCGCCAAGGTGATG 62.048 63.158 4.18 0.00 0.00 3.07
8385 12195 4.487412 GCTGCGCCAAGGTGATGC 62.487 66.667 4.18 2.91 0.00 3.91
8389 12199 4.465512 CGCCAAGGTGATGCGTGC 62.466 66.667 0.00 0.00 43.12 5.34
8390 12200 3.364441 GCCAAGGTGATGCGTGCA 61.364 61.111 0.00 0.00 0.00 4.57
8391 12201 2.562912 CCAAGGTGATGCGTGCAC 59.437 61.111 6.82 6.82 35.56 4.57
8392 12202 2.174107 CAAGGTGATGCGTGCACG 59.826 61.111 34.01 34.01 43.27 5.34
8393 12203 2.030412 AAGGTGATGCGTGCACGA 59.970 55.556 41.19 25.87 43.02 4.35
8394 12204 1.596752 AAGGTGATGCGTGCACGAA 60.597 52.632 41.19 33.78 43.02 3.85
8395 12205 1.163420 AAGGTGATGCGTGCACGAAA 61.163 50.000 41.19 28.03 43.02 3.46
8396 12206 0.955428 AGGTGATGCGTGCACGAAAT 60.955 50.000 41.19 31.13 43.02 2.17
8397 12207 0.794229 GGTGATGCGTGCACGAAATG 60.794 55.000 41.19 14.03 43.02 2.32
8398 12208 0.165727 GTGATGCGTGCACGAAATGA 59.834 50.000 41.19 24.37 43.02 2.57
8399 12209 0.443478 TGATGCGTGCACGAAATGAG 59.557 50.000 41.19 12.45 43.02 2.90
8400 12210 0.247814 GATGCGTGCACGAAATGAGG 60.248 55.000 41.19 11.65 43.02 3.86
8401 12211 1.647545 ATGCGTGCACGAAATGAGGG 61.648 55.000 41.19 10.87 43.02 4.30
8402 12212 3.039202 GCGTGCACGAAATGAGGGG 62.039 63.158 41.19 10.08 43.02 4.79
8403 12213 1.375396 CGTGCACGAAATGAGGGGA 60.375 57.895 34.93 0.00 43.02 4.81
8404 12214 0.953471 CGTGCACGAAATGAGGGGAA 60.953 55.000 34.93 0.00 43.02 3.97
8405 12215 1.243902 GTGCACGAAATGAGGGGAAA 58.756 50.000 0.00 0.00 0.00 3.13
8406 12216 1.611491 GTGCACGAAATGAGGGGAAAA 59.389 47.619 0.00 0.00 0.00 2.29
8407 12217 1.885887 TGCACGAAATGAGGGGAAAAG 59.114 47.619 0.00 0.00 0.00 2.27
8408 12218 1.886542 GCACGAAATGAGGGGAAAAGT 59.113 47.619 0.00 0.00 0.00 2.66
8409 12219 2.095212 GCACGAAATGAGGGGAAAAGTC 60.095 50.000 0.00 0.00 0.00 3.01
8410 12220 3.146066 CACGAAATGAGGGGAAAAGTCA 58.854 45.455 0.00 0.00 0.00 3.41
8411 12221 3.058224 CACGAAATGAGGGGAAAAGTCAC 60.058 47.826 0.00 0.00 0.00 3.67
8412 12222 3.146066 CGAAATGAGGGGAAAAGTCACA 58.854 45.455 0.00 0.00 0.00 3.58
8413 12223 3.568007 CGAAATGAGGGGAAAAGTCACAA 59.432 43.478 0.00 0.00 0.00 3.33
8414 12224 4.556699 CGAAATGAGGGGAAAAGTCACAAC 60.557 45.833 0.00 0.00 0.00 3.32
8415 12225 1.961793 TGAGGGGAAAAGTCACAACG 58.038 50.000 0.00 0.00 0.00 4.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.820725 CCTCATCAAAATTTGCTTATTCCATAA 57.179 29.630 0.00 0.00 0.00 1.90
6 7 6.352051 CCCCTCATCAAAATTTGCTTATTCCA 60.352 38.462 0.00 0.00 0.00 3.53
7 8 6.051074 CCCCTCATCAAAATTTGCTTATTCC 58.949 40.000 0.00 0.00 0.00 3.01
8 9 6.877236 TCCCCTCATCAAAATTTGCTTATTC 58.123 36.000 0.00 0.00 0.00 1.75
11 12 6.678568 TTTCCCCTCATCAAAATTTGCTTA 57.321 33.333 0.00 0.00 0.00 3.09
12 13 5.565455 TTTCCCCTCATCAAAATTTGCTT 57.435 34.783 0.00 0.00 0.00 3.91
13 14 5.565455 TTTTCCCCTCATCAAAATTTGCT 57.435 34.783 0.00 0.00 0.00 3.91
14 15 5.355071 GGATTTTCCCCTCATCAAAATTTGC 59.645 40.000 0.00 0.00 31.35 3.68
15 16 5.581874 CGGATTTTCCCCTCATCAAAATTTG 59.418 40.000 0.00 0.00 31.35 2.32
16 17 5.248248 ACGGATTTTCCCCTCATCAAAATTT 59.752 36.000 0.00 0.00 31.35 1.82
17 18 4.777366 ACGGATTTTCCCCTCATCAAAATT 59.223 37.500 0.00 0.00 31.35 1.82
18 19 4.352893 ACGGATTTTCCCCTCATCAAAAT 58.647 39.130 0.00 0.00 33.39 1.82
19 20 3.773560 ACGGATTTTCCCCTCATCAAAA 58.226 40.909 0.00 0.00 31.13 2.44
20 21 3.449746 ACGGATTTTCCCCTCATCAAA 57.550 42.857 0.00 0.00 31.13 2.69
21 22 4.577988 TTACGGATTTTCCCCTCATCAA 57.422 40.909 0.00 0.00 31.13 2.57
22 23 4.577988 TTTACGGATTTTCCCCTCATCA 57.422 40.909 0.00 0.00 31.13 3.07
23 24 5.907866 TTTTTACGGATTTTCCCCTCATC 57.092 39.130 0.00 0.00 31.13 2.92
24 25 6.867519 AATTTTTACGGATTTTCCCCTCAT 57.132 33.333 0.00 0.00 31.13 2.90
25 26 7.778185 TTAATTTTTACGGATTTTCCCCTCA 57.222 32.000 0.00 0.00 31.13 3.86
26 27 9.661563 ATTTTAATTTTTACGGATTTTCCCCTC 57.338 29.630 0.00 0.00 31.13 4.30
57 58 7.770366 ATACGGATTTTTGAAACTAGGGTTT 57.230 32.000 0.00 0.00 46.85 3.27
94 95 5.106594 GGCATTTTACAAGCAAATTTCTGGG 60.107 40.000 0.00 0.00 0.00 4.45
105 106 4.219725 TGTTCCTTAGGGCATTTTACAAGC 59.780 41.667 0.00 0.00 0.00 4.01
358 451 6.995091 AGTTTCTGCAATCTGAAGTAAAGTCT 59.005 34.615 0.00 0.00 32.84 3.24
437 530 5.185828 AGTTAAGATTGGTGGCTTCAAATCC 59.814 40.000 6.71 0.00 0.00 3.01
608 701 6.749923 AGTGAGATGTTAGAATGGAAAAGC 57.250 37.500 0.00 0.00 0.00 3.51
764 963 3.057734 GGCATCCACTAGTAATGCGTAC 58.942 50.000 24.84 14.34 45.27 3.67
873 2092 8.276252 ACTATGTTACCGTGCAGATTAAATTT 57.724 30.769 0.00 0.00 0.00 1.82
874 2093 7.859325 ACTATGTTACCGTGCAGATTAAATT 57.141 32.000 0.00 0.00 0.00 1.82
888 2107 8.943909 AACTTTCATACAGCTACTATGTTACC 57.056 34.615 9.39 0.00 32.02 2.85
900 2119 6.519761 CACAACAATACGAACTTTCATACAGC 59.480 38.462 0.00 0.00 0.00 4.40
1414 2641 1.585668 CGTCGTGAACTCATCTGATGC 59.414 52.381 12.78 0.00 0.00 3.91
1418 2645 0.729478 ACGCGTCGTGAACTCATCTG 60.729 55.000 13.68 0.00 39.18 2.90
1436 2663 9.382244 GGCGAATATGTTGTAAAAATAGATGAC 57.618 33.333 0.00 0.00 27.58 3.06
1437 2664 9.114952 TGGCGAATATGTTGTAAAAATAGATGA 57.885 29.630 0.00 0.00 27.58 2.92
1567 2806 8.593492 AATGGTTAATGTCTTTTGCTTTCTTC 57.407 30.769 0.00 0.00 0.00 2.87
1601 2841 1.276138 TGTCGGATCACTGAGCACAAT 59.724 47.619 0.00 0.00 31.51 2.71
1643 2883 3.420606 CAGAGTGCAGCTGCCGTG 61.421 66.667 34.64 21.57 41.18 4.94
1776 3022 2.655090 TGCAAGGTTGTGATTCTCCA 57.345 45.000 0.00 0.00 0.00 3.86
1788 3034 5.615289 GATTAGTATGTCCAGATGCAAGGT 58.385 41.667 0.00 0.00 0.00 3.50
1796 3042 4.021981 CCAGCATCGATTAGTATGTCCAGA 60.022 45.833 0.00 0.00 0.00 3.86
1916 3162 5.636965 TGACTTGGATGTGTTGTTTGTTTTG 59.363 36.000 0.00 0.00 0.00 2.44
2040 3286 6.542821 TGTCATAGGTGTGGAAATTCTTCTT 58.457 36.000 0.00 0.00 0.00 2.52
2106 3352 5.409643 AAGATAGAATGCAATGTGTACGC 57.590 39.130 0.00 0.00 0.00 4.42
2143 3389 1.067669 GATGCAGGTAGCTCGATGTCA 59.932 52.381 0.00 0.00 45.94 3.58
2170 3416 2.681848 CTGTTGAACTGCCTGATGGATC 59.318 50.000 0.00 0.00 34.57 3.36
2207 3453 1.628846 ACACAAGAGATACCCCGCTTT 59.371 47.619 0.00 0.00 0.00 3.51
2438 3686 2.224867 CCCACCTTGGATCAAGTTCAGT 60.225 50.000 6.86 0.00 40.96 3.41
2615 3864 8.314021 AGCATAAAAACCCAGAGGAAAATAAAG 58.686 33.333 0.00 0.00 36.73 1.85
2645 3896 6.326375 TCCACACACAAACATTTTACACTTC 58.674 36.000 0.00 0.00 0.00 3.01
2687 3940 4.219725 GCCTATTTGGGAAAGTGTTAGCAA 59.780 41.667 0.00 0.00 36.00 3.91
2761 4060 8.807118 CATAGTTTAGATAGGTGCTGGATTCTA 58.193 37.037 0.00 0.00 0.00 2.10
2780 4079 6.463614 CCTCACTTATAGCAGCTCCATAGTTT 60.464 42.308 0.00 0.00 0.00 2.66
2841 4140 8.096621 TCCCATCCAGTAACAATTGAACTATA 57.903 34.615 13.59 6.96 0.00 1.31
2911 4241 8.774546 TGTAAGAAGATCAATCTCTACCTGAT 57.225 34.615 0.00 0.00 35.76 2.90
3184 4685 2.306805 TGTAAGGTGGACGGTAGAGAGA 59.693 50.000 0.00 0.00 0.00 3.10
3185 4686 2.683867 CTGTAAGGTGGACGGTAGAGAG 59.316 54.545 0.00 0.00 0.00 3.20
3194 4695 3.010420 GCCTTCAATCTGTAAGGTGGAC 58.990 50.000 0.00 0.00 43.55 4.02
3411 4915 1.140312 TCAGTTCAGGGGAAAGCACT 58.860 50.000 0.00 0.00 34.13 4.40
3421 4925 4.778534 ATTCATGTTGCTTCAGTTCAGG 57.221 40.909 0.00 0.00 0.00 3.86
3612 5121 2.182030 GGGACGTCGAGCTGGAAG 59.818 66.667 9.92 9.96 0.00 3.46
3683 5192 6.037281 GCTGTTTTTCTATTGTAGTAGCTCCC 59.963 42.308 0.00 0.00 0.00 4.30
3684 5193 6.037281 GGCTGTTTTTCTATTGTAGTAGCTCC 59.963 42.308 0.00 0.00 0.00 4.70
3685 5194 6.594159 TGGCTGTTTTTCTATTGTAGTAGCTC 59.406 38.462 0.00 0.00 0.00 4.09
3686 5195 6.371825 GTGGCTGTTTTTCTATTGTAGTAGCT 59.628 38.462 0.00 0.00 0.00 3.32
3687 5196 6.403309 GGTGGCTGTTTTTCTATTGTAGTAGC 60.403 42.308 0.00 0.00 0.00 3.58
3688 5197 6.183360 CGGTGGCTGTTTTTCTATTGTAGTAG 60.183 42.308 0.00 0.00 0.00 2.57
3689 5198 5.640357 CGGTGGCTGTTTTTCTATTGTAGTA 59.360 40.000 0.00 0.00 0.00 1.82
3690 5199 4.454504 CGGTGGCTGTTTTTCTATTGTAGT 59.545 41.667 0.00 0.00 0.00 2.73
3691 5200 4.142687 CCGGTGGCTGTTTTTCTATTGTAG 60.143 45.833 0.00 0.00 0.00 2.74
3692 5201 3.754323 CCGGTGGCTGTTTTTCTATTGTA 59.246 43.478 0.00 0.00 0.00 2.41
3693 5202 2.556622 CCGGTGGCTGTTTTTCTATTGT 59.443 45.455 0.00 0.00 0.00 2.71
3694 5203 2.556622 ACCGGTGGCTGTTTTTCTATTG 59.443 45.455 6.12 0.00 0.00 1.90
3695 5204 2.871453 ACCGGTGGCTGTTTTTCTATT 58.129 42.857 6.12 0.00 0.00 1.73
3707 5216 5.632244 TTTTCTATTTTTCTACCGGTGGC 57.368 39.130 19.93 0.00 0.00 5.01
3732 5241 3.562182 TGGAACTGACGGCTCATATAGA 58.438 45.455 0.00 0.00 0.00 1.98
3734 5243 2.628178 CCTGGAACTGACGGCTCATATA 59.372 50.000 0.00 0.00 0.00 0.86
3737 5246 0.904865 TCCTGGAACTGACGGCTCAT 60.905 55.000 0.00 0.00 0.00 2.90
3760 5269 2.010067 CCCCCACAATCTGGACCAT 58.990 57.895 0.00 0.00 43.95 3.55
3776 5285 1.675641 GTGTGCTCACATCCACCCC 60.676 63.158 13.83 0.00 43.97 4.95
3790 5299 1.027357 AAGAAGCCAGCAAGTGTGTG 58.973 50.000 0.00 0.00 0.00 3.82
3791 5300 1.406539 CAAAGAAGCCAGCAAGTGTGT 59.593 47.619 0.00 0.00 0.00 3.72
3797 5306 0.822811 TTGTGCAAAGAAGCCAGCAA 59.177 45.000 0.00 0.00 38.91 3.91
3802 5311 2.473816 GGAGTTTTGTGCAAAGAAGCC 58.526 47.619 0.00 0.00 0.00 4.35
3804 5313 3.381272 TGAGGGAGTTTTGTGCAAAGAAG 59.619 43.478 0.00 0.00 0.00 2.85
3819 5328 7.562088 AGAGGTAAATAAGTAGAAGTGAGGGAG 59.438 40.741 0.00 0.00 0.00 4.30
3820 5329 7.420029 AGAGGTAAATAAGTAGAAGTGAGGGA 58.580 38.462 0.00 0.00 0.00 4.20
3824 5333 7.934855 ACGAGAGGTAAATAAGTAGAAGTGA 57.065 36.000 0.00 0.00 0.00 3.41
3847 5356 1.069258 GGCCTGGTGCTATCGGTAC 59.931 63.158 0.00 0.00 40.92 3.34
3850 5359 2.109799 CTGGCCTGGTGCTATCGG 59.890 66.667 3.32 0.00 40.92 4.18
3857 5384 4.340246 TGAGCTGCTGGCCTGGTG 62.340 66.667 7.01 0.00 43.05 4.17
3876 5403 0.041982 TAGGGTTGGGGAATTTGGGC 59.958 55.000 0.00 0.00 0.00 5.36
3967 5495 1.476007 GCTAGGCACCGGATCTGGAT 61.476 60.000 27.90 11.84 0.00 3.41
4011 5539 1.291877 CGAACAGAAGCTGGAACGGG 61.292 60.000 0.00 0.00 35.51 5.28
4081 5609 4.841246 AGAGTACCATCCAGTTCTTGTTCT 59.159 41.667 0.00 0.00 0.00 3.01
4150 5678 1.002624 GTGGAGAATGGCGGGTTGA 60.003 57.895 0.00 0.00 0.00 3.18
4226 5775 2.738013 TGACAGCAGACTCACAGATG 57.262 50.000 0.00 0.00 0.00 2.90
4242 5791 9.129209 GGCTACAAAATTAACTCTGAAATTGAC 57.871 33.333 0.00 0.00 0.00 3.18
4243 5792 9.077885 AGGCTACAAAATTAACTCTGAAATTGA 57.922 29.630 0.00 0.00 0.00 2.57
4367 6034 8.805175 ACATTCATATCACTTCCAAACATTCAA 58.195 29.630 0.00 0.00 0.00 2.69
4475 6142 4.116238 TGCATTTTCTCAAAAACCGTTCC 58.884 39.130 0.00 0.00 37.20 3.62
4490 6157 9.865321 GGCATATCTATGTGAATATTGCATTTT 57.135 29.630 0.00 0.00 36.11 1.82
4497 6164 7.627311 TGCTCAGGCATATCTATGTGAATATT 58.373 34.615 0.00 0.00 44.28 1.28
4696 6373 6.349300 AGTACATACTAACCAGGATTTGCAG 58.651 40.000 0.00 0.00 34.13 4.41
4722 6400 2.226437 TGAATTCGGCTCAGAAAAGTGC 59.774 45.455 0.04 0.00 33.43 4.40
4737 6415 7.929941 AGGTCTCTCCAAATTAACTGAATTC 57.070 36.000 0.00 0.00 36.71 2.17
4778 6457 5.754890 GCAGAATTTCTGTTTTTGTGATGGT 59.245 36.000 23.66 0.00 45.94 3.55
4783 6462 7.064060 AGTTTGCAGAATTTCTGTTTTTGTG 57.936 32.000 23.66 1.70 45.94 3.33
4808 6488 2.097036 TCTCATGTACAGTACCCGGTG 58.903 52.381 8.30 0.00 0.00 4.94
4875 6558 1.211969 CAGTCTTGTGCCTGCATGC 59.788 57.895 11.82 11.82 0.00 4.06
4880 6563 6.680810 TGAATAAATTTCAGTCTTGTGCCTG 58.319 36.000 0.00 0.00 0.00 4.85
4881 6564 6.899393 TGAATAAATTTCAGTCTTGTGCCT 57.101 33.333 0.00 0.00 0.00 4.75
4903 6586 5.593968 AGTGCCACATATTTGCATGTATTG 58.406 37.500 0.00 0.00 37.02 1.90
4904 6587 5.857471 AGTGCCACATATTTGCATGTATT 57.143 34.783 0.00 0.00 37.02 1.89
4906 6589 4.704057 TGAAGTGCCACATATTTGCATGTA 59.296 37.500 0.00 0.00 37.02 2.29
5004 6687 1.402259 ACTAGTCGACAAGCTCCGATG 59.598 52.381 19.50 0.00 37.14 3.84
5059 6745 6.763610 CACTACTTCCCTCCAATTAGATTGAC 59.236 42.308 2.37 0.00 42.83 3.18
5069 6756 0.606604 GTCGCACTACTTCCCTCCAA 59.393 55.000 0.00 0.00 0.00 3.53
5147 6835 5.394005 CCTTTTTGGATTGTGTGTTCTCACA 60.394 40.000 4.00 4.00 44.39 3.58
5255 6948 6.507958 TCTTGATTTTGAACACTGTTGACA 57.492 33.333 0.00 0.00 0.00 3.58
5353 7047 4.180057 CTCTTGAGAGAAGGATTGTTCCG 58.820 47.826 1.72 0.00 44.76 4.30
5355 7049 5.159273 ACCTCTTGAGAGAAGGATTGTTC 57.841 43.478 9.55 0.00 44.74 3.18
5389 7083 1.442769 ACGAGCATTACAAGCTGTGG 58.557 50.000 0.00 0.00 43.58 4.17
5439 7137 9.053135 CAACACAATTTGAAACAGACAAAATTG 57.947 29.630 14.79 14.79 39.95 2.32
5462 7161 9.683069 AGATCTCATTTTATCACAACAAACAAC 57.317 29.630 0.00 0.00 0.00 3.32
5507 7209 7.716998 ATGATGTCATATGGACTTGTAAAGACC 59.283 37.037 2.13 2.13 45.31 3.85
5573 7277 5.957842 TTATACAAAGAACCCTGCAACAG 57.042 39.130 0.00 0.00 0.00 3.16
5601 7305 2.410262 GCTTCAATTCGTCGTCACACTG 60.410 50.000 0.00 0.00 0.00 3.66
5612 7316 2.423538 CCCTACTTTGGGCTTCAATTCG 59.576 50.000 0.00 0.00 40.84 3.34
5666 7370 8.780846 ACATCGTGTAATATGTCCTGTAAAAA 57.219 30.769 0.00 0.00 30.54 1.94
5682 7386 5.107414 CGTACACCAAATTCAACATCGTGTA 60.107 40.000 0.00 0.00 34.92 2.90
5687 7392 5.607119 AGACGTACACCAAATTCAACATC 57.393 39.130 0.00 0.00 0.00 3.06
5694 7399 3.811083 TGTCCAAGACGTACACCAAATT 58.189 40.909 0.00 0.00 34.95 1.82
5771 7476 3.971245 ATCTTTCTCAGGACGAAAGCT 57.029 42.857 7.45 0.00 44.28 3.74
5779 7484 6.942005 TCAATTGCAAGTTATCTTTCTCAGGA 59.058 34.615 4.94 0.00 0.00 3.86
5797 7502 7.254319 CCTTAGAAATGTTGCATCATCAATTGC 60.254 37.037 10.62 0.00 39.33 3.56
5798 7503 7.977293 TCCTTAGAAATGTTGCATCATCAATTG 59.023 33.333 10.62 0.00 0.00 2.32
5799 7504 8.070034 TCCTTAGAAATGTTGCATCATCAATT 57.930 30.769 10.62 2.19 0.00 2.32
5800 7505 7.649533 TCCTTAGAAATGTTGCATCATCAAT 57.350 32.000 10.62 1.23 0.00 2.57
5801 7506 7.177216 ACTTCCTTAGAAATGTTGCATCATCAA 59.823 33.333 10.62 3.23 0.00 2.57
5803 7508 6.971184 CACTTCCTTAGAAATGTTGCATCATC 59.029 38.462 10.62 0.85 0.00 2.92
5804 7509 6.127535 CCACTTCCTTAGAAATGTTGCATCAT 60.128 38.462 4.37 4.37 26.95 2.45
5805 7510 5.183713 CCACTTCCTTAGAAATGTTGCATCA 59.816 40.000 0.00 0.00 26.95 3.07
5806 7511 5.183904 ACCACTTCCTTAGAAATGTTGCATC 59.816 40.000 0.00 0.00 26.95 3.91
5847 9524 6.586844 AGTGTCGTTTCTTTCTTAGAGTATGC 59.413 38.462 0.00 0.00 33.51 3.14
5851 9528 5.903810 ACAGTGTCGTTTCTTTCTTAGAGT 58.096 37.500 0.00 0.00 33.51 3.24
5862 9539 4.762956 ACCTCTACTACAGTGTCGTTTC 57.237 45.455 5.68 0.00 0.00 2.78
5872 9549 6.188407 AGAAGAAGCACATACCTCTACTACA 58.812 40.000 0.00 0.00 0.00 2.74
5873 9550 6.702716 AGAAGAAGCACATACCTCTACTAC 57.297 41.667 0.00 0.00 0.00 2.73
5874 9551 6.405953 GCAAGAAGAAGCACATACCTCTACTA 60.406 42.308 0.00 0.00 0.00 1.82
5884 9561 2.771089 TCGAAGCAAGAAGAAGCACAT 58.229 42.857 0.00 0.00 0.00 3.21
5903 9580 7.649057 AGCAAAACAAATAAGTGGTAGTCTTC 58.351 34.615 0.00 0.00 0.00 2.87
5917 9594 5.596836 TGAGGAGACAAAGCAAAACAAAT 57.403 34.783 0.00 0.00 0.00 2.32
5958 9638 5.046591 TGGGTAAATGATCTATCTAAGCCGG 60.047 44.000 0.00 0.00 0.00 6.13
6001 9683 2.161609 CGATACCAAAGGCCAGTCAAAC 59.838 50.000 5.01 0.00 0.00 2.93
6014 9696 8.364894 ACATACATACATCTTTAGCGATACCAA 58.635 33.333 0.00 0.00 0.00 3.67
6063 9750 9.096160 CAAGATACCAGATATGCTAATGTCATC 57.904 37.037 0.00 0.00 0.00 2.92
6143 9833 9.647797 ACAAATAATTAGATGGCATGCATTATG 57.352 29.630 21.36 11.44 39.88 1.90
6164 9854 9.851686 TCCTACAGATGCAGATTATAAACAAAT 57.148 29.630 0.00 0.00 0.00 2.32
6201 9911 6.070194 AGGACATCGAGAAATTTAAAGGGAGA 60.070 38.462 0.00 0.00 0.00 3.71
6215 9925 4.956700 AGGACAAATAGAAGGACATCGAGA 59.043 41.667 0.00 0.00 0.00 4.04
6278 9988 5.579904 CCATGCATAGACTTCCGATCAATAG 59.420 44.000 0.00 0.00 0.00 1.73
6303 10013 1.187567 GGGGGTCAAAGCTTGCACAT 61.188 55.000 0.00 0.00 0.00 3.21
6316 10026 0.543749 CTCCAGATTCACAGGGGGTC 59.456 60.000 0.00 0.00 0.00 4.46
6340 10050 7.710907 TCTGGATACCTTGAGAAAATATGAACG 59.289 37.037 0.00 0.00 0.00 3.95
6384 10096 7.599998 CCTTGCAAAATTAGATACAAGCAAACT 59.400 33.333 0.00 0.00 39.82 2.66
6436 10148 7.868415 GCTCAATAGTTATTGTTCGGATACTCT 59.132 37.037 10.69 0.00 42.70 3.24
6468 10180 3.511146 CCATTTGCCACAACTGACCTAAT 59.489 43.478 0.00 0.00 0.00 1.73
6481 10193 6.318648 CAGATAGTACTTTAAGCCATTTGCCA 59.681 38.462 0.00 0.00 42.71 4.92
6499 10211 8.783660 TCAAACATATAGAAGGACCAGATAGT 57.216 34.615 0.00 0.00 0.00 2.12
6563 10275 1.526575 CGTTTGCTGCTCCAACCCAT 61.527 55.000 0.00 0.00 0.00 4.00
6575 10287 2.472695 TATGTCCAGCTTCGTTTGCT 57.527 45.000 0.00 0.00 42.06 3.91
6601 10313 4.949856 ACAACACATTTTGAGAAGAGTGGT 59.050 37.500 0.00 0.00 0.00 4.16
6604 10316 6.262944 TGCATACAACACATTTTGAGAAGAGT 59.737 34.615 0.00 0.00 0.00 3.24
6625 10337 7.139896 TGTTAGAAACATGTACGAATTGCAT 57.860 32.000 0.00 0.00 36.25 3.96
6655 10367 9.582648 ACCTAGTTAACCACAGAAAATAAACAT 57.417 29.630 0.88 0.00 0.00 2.71
6657 10369 8.294577 CCACCTAGTTAACCACAGAAAATAAAC 58.705 37.037 0.88 0.00 0.00 2.01
6671 10383 4.824289 TCGGTTCAATCCACCTAGTTAAC 58.176 43.478 0.00 0.00 31.32 2.01
6689 10401 5.222275 TGGACTCTATATACCCTTCATCGGT 60.222 44.000 0.00 0.00 37.40 4.69
6754 10473 6.957631 TGCCTCCTATTTTAGTGATTCTTGA 58.042 36.000 0.00 0.00 0.00 3.02
6817 10539 7.701539 ACATTTGCATGAAGACCAAGTATTA 57.298 32.000 0.00 0.00 34.11 0.98
6818 10540 6.594788 ACATTTGCATGAAGACCAAGTATT 57.405 33.333 0.00 0.00 34.11 1.89
6819 10541 6.886459 AGTACATTTGCATGAAGACCAAGTAT 59.114 34.615 0.00 0.00 34.11 2.12
6820 10542 6.237901 AGTACATTTGCATGAAGACCAAGTA 58.762 36.000 0.00 0.00 34.11 2.24
6824 10546 7.517614 TTTTAGTACATTTGCATGAAGACCA 57.482 32.000 0.00 0.00 34.11 4.02
6854 10576 2.819608 ACAACGCAAGAGGCAAACATAT 59.180 40.909 0.00 0.00 45.17 1.78
6860 10582 0.380378 GAACACAACGCAAGAGGCAA 59.620 50.000 0.00 0.00 45.17 4.52
6870 10594 8.922676 AGTATTTGAGTACATAAGAACACAACG 58.077 33.333 0.00 0.00 0.00 4.10
6881 10605 7.979537 ACAAGCATTCGAGTATTTGAGTACATA 59.020 33.333 9.54 0.00 0.00 2.29
6912 10636 8.526667 AGAAGCATCTGAGTAAGTTATCACTA 57.473 34.615 0.00 0.00 33.59 2.74
6942 10687 9.677567 CAAGCTAAACTTTGTACATTTACATGT 57.322 29.630 2.69 2.69 41.01 3.21
6943 10688 9.891828 TCAAGCTAAACTTTGTACATTTACATG 57.108 29.630 0.00 0.00 38.05 3.21
6948 10693 8.299570 CCAGATCAAGCTAAACTTTGTACATTT 58.700 33.333 0.00 0.00 36.04 2.32
6949 10694 7.094205 CCCAGATCAAGCTAAACTTTGTACATT 60.094 37.037 0.00 0.00 36.04 2.71
6963 10711 0.924823 AAGCCATCCCAGATCAAGCT 59.075 50.000 0.00 0.00 0.00 3.74
7056 10818 3.904339 TGCCCCTCTCCTCTTCATAATAC 59.096 47.826 0.00 0.00 0.00 1.89
7063 10825 0.758123 CTGATGCCCCTCTCCTCTTC 59.242 60.000 0.00 0.00 0.00 2.87
7082 10848 6.255453 ACCATTTTCATATATGCACAAAACGC 59.745 34.615 7.92 0.00 0.00 4.84
7113 10879 3.575687 CTCCTCTTTGGCTGTGGAAAAAT 59.424 43.478 0.00 0.00 35.26 1.82
7116 10882 1.774254 TCTCCTCTTTGGCTGTGGAAA 59.226 47.619 0.00 0.00 35.26 3.13
7118 10884 0.687354 GTCTCCTCTTTGGCTGTGGA 59.313 55.000 0.00 0.00 35.26 4.02
7119 10885 0.397941 TGTCTCCTCTTTGGCTGTGG 59.602 55.000 0.00 0.00 35.26 4.17
7120 10886 2.289882 TGATGTCTCCTCTTTGGCTGTG 60.290 50.000 0.00 0.00 35.26 3.66
7177 10970 7.775093 CCACCTTAACTTTCTCATATCCAATCA 59.225 37.037 0.00 0.00 0.00 2.57
7197 10992 3.626930 TCACTTTTGCAGTAACCACCTT 58.373 40.909 0.00 0.00 32.76 3.50
7247 11042 5.124457 GCAGCTCAGGTAGATTTCATGAAAA 59.876 40.000 23.91 5.97 33.56 2.29
7248 11043 4.637534 GCAGCTCAGGTAGATTTCATGAAA 59.362 41.667 22.52 22.52 34.46 2.69
7251 11046 2.877168 GGCAGCTCAGGTAGATTTCATG 59.123 50.000 0.00 0.00 0.00 3.07
7252 11047 2.776536 AGGCAGCTCAGGTAGATTTCAT 59.223 45.455 0.00 0.00 0.00 2.57
7253 11048 2.169352 GAGGCAGCTCAGGTAGATTTCA 59.831 50.000 0.00 0.00 0.00 2.69
7254 11049 2.484594 GGAGGCAGCTCAGGTAGATTTC 60.485 54.545 0.00 0.00 0.00 2.17
7255 11050 1.488393 GGAGGCAGCTCAGGTAGATTT 59.512 52.381 0.00 0.00 0.00 2.17
7260 11055 0.335019 TAGTGGAGGCAGCTCAGGTA 59.665 55.000 0.00 0.00 0.00 3.08
7261 11056 0.975040 CTAGTGGAGGCAGCTCAGGT 60.975 60.000 0.00 0.00 0.00 4.00
7262 11057 0.685785 TCTAGTGGAGGCAGCTCAGG 60.686 60.000 0.00 0.00 0.00 3.86
7264 11059 1.759445 GATTCTAGTGGAGGCAGCTCA 59.241 52.381 0.00 0.00 0.00 4.26
7265 11060 2.038659 AGATTCTAGTGGAGGCAGCTC 58.961 52.381 0.00 0.00 0.00 4.09
7266 11061 1.761784 CAGATTCTAGTGGAGGCAGCT 59.238 52.381 0.00 0.00 0.00 4.24
7267 11062 1.484240 ACAGATTCTAGTGGAGGCAGC 59.516 52.381 0.00 0.00 0.00 5.25
7287 11092 4.506095 CCATCAGATCAAGCATGGATGGTA 60.506 45.833 13.59 0.00 44.18 3.25
7320 11126 8.568794 GGGCATATGGTAGAAGAATAGAAAAAC 58.431 37.037 4.56 0.00 0.00 2.43
7372 11178 2.366916 TGCTCAGATAGGCTTTCTAGGC 59.633 50.000 17.54 17.54 46.82 3.93
7391 11197 2.229589 CGCAGCTCGAGACTGATGC 61.230 63.158 29.15 21.46 41.50 3.91
7412 11218 1.027357 GCACCGGAATCTTGCATCAT 58.973 50.000 9.46 0.00 36.22 2.45
7439 11245 2.847234 ACCACACCGCTCCTTCCA 60.847 61.111 0.00 0.00 0.00 3.53
7474 11284 2.676342 GTCCGCAATTTACCATTCGACT 59.324 45.455 0.00 0.00 0.00 4.18
7498 11308 9.302345 TGAAAAATTACAAACGCTTTGAACATA 57.698 25.926 14.58 0.00 43.26 2.29
7504 11314 5.895889 GCACTGAAAAATTACAAACGCTTTG 59.104 36.000 8.35 8.35 45.95 2.77
7505 11315 5.810074 AGCACTGAAAAATTACAAACGCTTT 59.190 32.000 0.00 0.00 0.00 3.51
7508 11318 4.502645 ACAGCACTGAAAAATTACAAACGC 59.497 37.500 4.31 0.00 0.00 4.84
7677 11487 2.668834 CGTCGTCTTCTCTTCCCAAGTC 60.669 54.545 0.00 0.00 0.00 3.01
7694 11504 2.430244 ACTAGCAACACGGCGTCG 60.430 61.111 10.85 8.42 43.02 5.12
7695 11505 2.380410 CCACTAGCAACACGGCGTC 61.380 63.158 10.85 0.00 39.27 5.19
7696 11506 2.357034 CCACTAGCAACACGGCGT 60.357 61.111 6.77 6.77 39.27 5.68
8197 12007 3.013932 CCTGCCCAAGCCTCCTCT 61.014 66.667 0.00 0.00 38.69 3.69
8198 12008 4.120755 CCCTGCCCAAGCCTCCTC 62.121 72.222 0.00 0.00 38.69 3.71
8200 12010 4.748144 CACCCTGCCCAAGCCTCC 62.748 72.222 0.00 0.00 38.69 4.30
8201 12011 4.748144 CCACCCTGCCCAAGCCTC 62.748 72.222 0.00 0.00 38.69 4.70
8250 12060 4.446413 GACCACCTACACCCGCGG 62.446 72.222 21.04 21.04 0.00 6.46
8251 12061 4.789075 CGACCACCTACACCCGCG 62.789 72.222 0.00 0.00 0.00 6.46
8253 12063 4.446413 GGCGACCACCTACACCCG 62.446 72.222 0.00 0.00 0.00 5.28
8254 12064 2.400269 TTTGGCGACCACCTACACCC 62.400 60.000 0.00 0.00 30.78 4.61
8255 12065 0.953960 CTTTGGCGACCACCTACACC 60.954 60.000 0.00 0.00 30.78 4.16
8256 12066 0.250166 ACTTTGGCGACCACCTACAC 60.250 55.000 0.00 0.00 30.78 2.90
8257 12067 0.470766 AACTTTGGCGACCACCTACA 59.529 50.000 0.00 0.00 30.78 2.74
8258 12068 0.872388 CAACTTTGGCGACCACCTAC 59.128 55.000 0.00 0.00 30.78 3.18
8259 12069 0.759959 TCAACTTTGGCGACCACCTA 59.240 50.000 0.00 0.00 30.78 3.08
8260 12070 0.535102 CTCAACTTTGGCGACCACCT 60.535 55.000 0.00 0.00 30.78 4.00
8261 12071 1.949257 CTCAACTTTGGCGACCACC 59.051 57.895 0.00 0.00 30.78 4.61
8262 12072 1.282875 GCTCAACTTTGGCGACCAC 59.717 57.895 0.00 0.00 30.78 4.16
8263 12073 0.749818 TTGCTCAACTTTGGCGACCA 60.750 50.000 0.00 0.00 0.00 4.02
8264 12074 0.317854 GTTGCTCAACTTTGGCGACC 60.318 55.000 5.56 0.00 38.25 4.79
8265 12075 3.164028 GTTGCTCAACTTTGGCGAC 57.836 52.632 5.56 6.91 38.25 5.19
8276 12086 9.944376 AGAAGTAAAAACATATCTAGTTGCTCA 57.056 29.630 0.00 0.00 0.00 4.26
8279 12089 9.690434 CGAAGAAGTAAAAACATATCTAGTTGC 57.310 33.333 0.00 0.00 0.00 4.17
8295 12105 9.417561 TCCTCTATCTATTTTCCGAAGAAGTAA 57.582 33.333 0.00 0.00 32.35 2.24
8296 12106 8.991783 TCCTCTATCTATTTTCCGAAGAAGTA 57.008 34.615 0.00 0.00 32.35 2.24
8297 12107 7.899648 TCCTCTATCTATTTTCCGAAGAAGT 57.100 36.000 0.00 0.00 32.35 3.01
8298 12108 8.417884 AGTTCCTCTATCTATTTTCCGAAGAAG 58.582 37.037 0.00 0.00 32.35 2.85
8299 12109 8.307582 AGTTCCTCTATCTATTTTCCGAAGAA 57.692 34.615 0.00 0.00 0.00 2.52
8300 12110 7.899648 AGTTCCTCTATCTATTTTCCGAAGA 57.100 36.000 0.00 0.00 0.00 2.87
8301 12111 9.069082 TCTAGTTCCTCTATCTATTTTCCGAAG 57.931 37.037 0.00 0.00 0.00 3.79
8302 12112 8.991783 TCTAGTTCCTCTATCTATTTTCCGAA 57.008 34.615 0.00 0.00 0.00 4.30
8310 12120 9.627123 GCACTCATATCTAGTTCCTCTATCTAT 57.373 37.037 0.00 0.00 0.00 1.98
8311 12121 7.766738 CGCACTCATATCTAGTTCCTCTATCTA 59.233 40.741 0.00 0.00 0.00 1.98
8312 12122 6.597672 CGCACTCATATCTAGTTCCTCTATCT 59.402 42.308 0.00 0.00 0.00 1.98
8313 12123 6.183360 CCGCACTCATATCTAGTTCCTCTATC 60.183 46.154 0.00 0.00 0.00 2.08
8314 12124 5.650266 CCGCACTCATATCTAGTTCCTCTAT 59.350 44.000 0.00 0.00 0.00 1.98
8315 12125 5.004448 CCGCACTCATATCTAGTTCCTCTA 58.996 45.833 0.00 0.00 0.00 2.43
8316 12126 3.823873 CCGCACTCATATCTAGTTCCTCT 59.176 47.826 0.00 0.00 0.00 3.69
8317 12127 3.612955 GCCGCACTCATATCTAGTTCCTC 60.613 52.174 0.00 0.00 0.00 3.71
8318 12128 2.297597 GCCGCACTCATATCTAGTTCCT 59.702 50.000 0.00 0.00 0.00 3.36
8319 12129 2.610727 GGCCGCACTCATATCTAGTTCC 60.611 54.545 0.00 0.00 0.00 3.62
8320 12130 2.678324 GGCCGCACTCATATCTAGTTC 58.322 52.381 0.00 0.00 0.00 3.01
8321 12131 1.000163 CGGCCGCACTCATATCTAGTT 60.000 52.381 14.67 0.00 0.00 2.24
8322 12132 0.598562 CGGCCGCACTCATATCTAGT 59.401 55.000 14.67 0.00 0.00 2.57
8323 12133 0.598562 ACGGCCGCACTCATATCTAG 59.401 55.000 28.58 0.00 0.00 2.43
8324 12134 0.596577 GACGGCCGCACTCATATCTA 59.403 55.000 28.58 0.00 0.00 1.98
8325 12135 1.364171 GACGGCCGCACTCATATCT 59.636 57.895 28.58 0.00 0.00 1.98
8326 12136 1.664965 GGACGGCCGCACTCATATC 60.665 63.158 28.58 12.70 0.00 1.63
8327 12137 2.134287 AGGACGGCCGCACTCATAT 61.134 57.895 28.58 1.54 39.96 1.78
8328 12138 2.758327 AGGACGGCCGCACTCATA 60.758 61.111 28.58 0.00 39.96 2.15
8329 12139 4.457496 CAGGACGGCCGCACTCAT 62.457 66.667 28.58 10.86 39.96 2.90
8341 12151 0.036388 TGGATTTCTGCGTCCAGGAC 60.036 55.000 9.92 9.92 39.51 3.85
8342 12152 2.371784 TGGATTTCTGCGTCCAGGA 58.628 52.632 0.00 0.00 39.51 3.86
8345 12155 1.377202 GGCTGGATTTCTGCGTCCA 60.377 57.895 0.00 0.00 42.03 4.02
8346 12156 1.377202 TGGCTGGATTTCTGCGTCC 60.377 57.895 0.00 0.00 40.65 4.79
8347 12157 1.648467 GGTGGCTGGATTTCTGCGTC 61.648 60.000 0.00 0.00 40.65 5.19
8348 12158 1.675641 GGTGGCTGGATTTCTGCGT 60.676 57.895 0.00 0.00 40.65 5.24
8349 12159 1.377725 AGGTGGCTGGATTTCTGCG 60.378 57.895 0.00 0.00 40.65 5.18
8350 12160 1.941999 GCAGGTGGCTGGATTTCTGC 61.942 60.000 0.00 0.00 40.30 4.26
8351 12161 2.187073 GCAGGTGGCTGGATTTCTG 58.813 57.895 0.00 0.00 40.25 3.02
8352 12162 4.751431 GCAGGTGGCTGGATTTCT 57.249 55.556 0.00 0.00 40.25 2.52
8369 12179 4.170062 CGCATCACCTTGGCGCAG 62.170 66.667 10.83 0.00 44.49 5.18
8373 12183 3.364441 TGCACGCATCACCTTGGC 61.364 61.111 0.00 0.00 0.00 4.52
8374 12184 2.562912 GTGCACGCATCACCTTGG 59.437 61.111 0.00 0.00 0.00 3.61
8375 12185 1.840630 TTCGTGCACGCATCACCTTG 61.841 55.000 33.63 4.45 39.60 3.61
8376 12186 1.163420 TTTCGTGCACGCATCACCTT 61.163 50.000 33.63 0.00 39.60 3.50
8377 12187 0.955428 ATTTCGTGCACGCATCACCT 60.955 50.000 33.63 10.93 39.60 4.00
8378 12188 0.794229 CATTTCGTGCACGCATCACC 60.794 55.000 33.63 0.00 39.60 4.02
8379 12189 0.165727 TCATTTCGTGCACGCATCAC 59.834 50.000 33.63 0.00 39.60 3.06
8380 12190 0.443478 CTCATTTCGTGCACGCATCA 59.557 50.000 33.63 14.65 39.60 3.07
8381 12191 0.247814 CCTCATTTCGTGCACGCATC 60.248 55.000 33.63 0.00 39.60 3.91
8382 12192 1.647545 CCCTCATTTCGTGCACGCAT 61.648 55.000 33.63 23.70 39.60 4.73
8383 12193 2.324330 CCCTCATTTCGTGCACGCA 61.324 57.895 33.63 22.21 39.60 5.24
8384 12194 2.480555 CCCTCATTTCGTGCACGC 59.519 61.111 33.63 0.00 39.60 5.34
8385 12195 0.953471 TTCCCCTCATTTCGTGCACG 60.953 55.000 32.76 32.76 41.45 5.34
8386 12196 1.243902 TTTCCCCTCATTTCGTGCAC 58.756 50.000 6.82 6.82 0.00 4.57
8387 12197 1.885887 CTTTTCCCCTCATTTCGTGCA 59.114 47.619 0.00 0.00 0.00 4.57
8388 12198 1.886542 ACTTTTCCCCTCATTTCGTGC 59.113 47.619 0.00 0.00 0.00 5.34
8389 12199 3.058224 GTGACTTTTCCCCTCATTTCGTG 60.058 47.826 0.00 0.00 0.00 4.35
8390 12200 3.146847 GTGACTTTTCCCCTCATTTCGT 58.853 45.455 0.00 0.00 0.00 3.85
8391 12201 3.146066 TGTGACTTTTCCCCTCATTTCG 58.854 45.455 0.00 0.00 0.00 3.46
8392 12202 4.556699 CGTTGTGACTTTTCCCCTCATTTC 60.557 45.833 0.00 0.00 0.00 2.17
8393 12203 3.317993 CGTTGTGACTTTTCCCCTCATTT 59.682 43.478 0.00 0.00 0.00 2.32
8394 12204 2.884639 CGTTGTGACTTTTCCCCTCATT 59.115 45.455 0.00 0.00 0.00 2.57
8395 12205 2.504367 CGTTGTGACTTTTCCCCTCAT 58.496 47.619 0.00 0.00 0.00 2.90
8396 12206 1.961793 CGTTGTGACTTTTCCCCTCA 58.038 50.000 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.