Multiple sequence alignment - TraesCS7D01G490500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G490500 chr7D 100.000 3482 0 0 1 3482 599810907 599807426 0.000000e+00 6431
1 TraesCS7D01G490500 chr7D 89.150 1318 137 5 1185 2498 600449058 600450373 0.000000e+00 1637
2 TraesCS7D01G490500 chr7D 87.735 1223 142 8 1178 2396 599798364 599797146 0.000000e+00 1421
3 TraesCS7D01G490500 chr7D 92.010 413 33 0 706 1118 600448510 600448922 6.480000e-162 580
4 TraesCS7D01G490500 chr7D 91.951 410 33 0 709 1118 599798944 599798535 3.010000e-160 575
5 TraesCS7D01G490500 chr7D 82.488 217 17 9 505 706 600448263 600448473 1.660000e-38 171
6 TraesCS7D01G490500 chr7D 93.103 116 7 1 3367 3482 629606336 629606450 5.980000e-38 169
7 TraesCS7D01G490500 chr7D 83.200 125 13 4 591 712 599799085 599798966 1.320000e-19 108
8 TraesCS7D01G490500 chr7B 93.030 2525 92 23 475 2925 679673510 679670996 0.000000e+00 3611
9 TraesCS7D01G490500 chr7B 88.138 1214 138 6 1186 2396 679634876 679633666 0.000000e+00 1439
10 TraesCS7D01G490500 chr7B 88.859 745 80 2 1185 1926 679789283 679790027 0.000000e+00 913
11 TraesCS7D01G490500 chr7B 88.215 577 65 1 1922 2498 679793153 679793726 0.000000e+00 686
12 TraesCS7D01G490500 chr7B 85.612 556 48 17 591 1118 679635600 679635049 3.930000e-154 555
13 TraesCS7D01G490500 chr7B 90.168 417 40 1 703 1118 679788731 679789147 3.060000e-150 542
14 TraesCS7D01G490500 chr7B 82.759 261 20 2 17 260 371461217 371460965 3.520000e-50 209
15 TraesCS7D01G490500 chr7B 85.052 194 28 1 3132 3324 143179753 143179946 2.740000e-46 196
16 TraesCS7D01G490500 chr7B 93.443 122 7 1 3361 3482 601911286 601911406 2.760000e-41 180
17 TraesCS7D01G490500 chr7B 81.776 214 24 7 505 706 679788488 679788698 7.730000e-37 165
18 TraesCS7D01G490500 chr7A 92.679 1407 67 6 475 1846 692049992 692048587 0.000000e+00 1995
19 TraesCS7D01G490500 chr7A 91.556 1125 52 18 1839 2925 692045804 692044685 0.000000e+00 1511
20 TraesCS7D01G490500 chr7A 86.828 1321 140 13 1178 2495 692338340 692339629 0.000000e+00 1445
21 TraesCS7D01G490500 chr7A 87.163 1223 149 8 1178 2396 692027268 692026050 0.000000e+00 1382
22 TraesCS7D01G490500 chr7A 85.201 473 48 11 3028 3481 692044951 692044482 1.890000e-127 466
23 TraesCS7D01G490500 chr7A 89.846 325 32 1 709 1033 692038693 692038370 1.930000e-112 416
24 TraesCS7D01G490500 chr7A 93.396 106 7 0 2924 3029 646560186 646560291 1.290000e-34 158
25 TraesCS7D01G490500 chr6A 77.750 1218 223 35 1301 2485 131229429 131230631 0.000000e+00 704
26 TraesCS7D01G490500 chr6A 85.526 152 14 7 2775 2923 70606947 70606801 6.020000e-33 152
27 TraesCS7D01G490500 chr6B 81.281 406 66 8 706 1107 194426049 194425650 1.560000e-83 320
28 TraesCS7D01G490500 chr6B 92.593 108 8 0 2923 3030 273738130 273738237 4.650000e-34 156
29 TraesCS7D01G490500 chr6B 83.766 154 16 8 2774 2923 454030704 454030852 1.690000e-28 137
30 TraesCS7D01G490500 chr6D 80.988 405 69 6 706 1107 106705134 106704735 7.250000e-82 315
31 TraesCS7D01G490500 chr6D 97.590 166 4 0 302 467 431000015 431000180 5.690000e-73 285
32 TraesCS7D01G490500 chr6D 91.597 119 9 1 3364 3482 6140793 6140910 2.780000e-36 163
33 TraesCS7D01G490500 chr6D 91.228 114 9 1 2917 3029 273093575 273093462 1.670000e-33 154
34 TraesCS7D01G490500 chr4D 97.006 167 5 0 301 467 243613438 243613272 7.360000e-72 281
35 TraesCS7D01G490500 chr4D 91.597 119 8 2 3364 3482 484092603 484092487 2.780000e-36 163
36 TraesCS7D01G490500 chr3D 96.450 169 4 2 303 471 450884622 450884456 9.520000e-71 278
37 TraesCS7D01G490500 chr3D 95.833 168 7 0 300 467 314150171 314150338 4.430000e-69 272
38 TraesCS7D01G490500 chr3D 93.458 107 7 0 2923 3029 369414424 369414318 3.600000e-35 159
39 TraesCS7D01G490500 chr1D 96.970 165 5 0 303 467 39948770 39948934 9.520000e-71 278
40 TraesCS7D01G490500 chr1D 94.857 175 8 1 293 467 9218381 9218208 4.430000e-69 272
41 TraesCS7D01G490500 chr1D 83.333 186 23 4 3132 3315 255822984 255823163 7.730000e-37 165
42 TraesCS7D01G490500 chr1D 92.241 116 8 1 3367 3482 445096406 445096520 2.780000e-36 163
43 TraesCS7D01G490500 chr1D 83.562 146 13 8 2775 2919 255822984 255823119 3.650000e-25 126
44 TraesCS7D01G490500 chr4A 95.882 170 7 0 300 469 724811111 724811280 3.420000e-70 276
45 TraesCS7D01G490500 chr4A 92.105 114 6 3 2917 3029 611226880 611226991 1.290000e-34 158
46 TraesCS7D01G490500 chr4A 81.026 195 32 5 3129 3320 673796870 673797062 2.160000e-32 150
47 TraesCS7D01G490500 chr1A 95.376 173 6 2 299 470 284146824 284146653 1.230000e-69 274
48 TraesCS7D01G490500 chr1A 83.077 195 28 5 3132 3323 516066512 516066320 4.620000e-39 172
49 TraesCS7D01G490500 chr1A 89.286 112 11 1 152 263 49974653 49974763 4.690000e-29 139
50 TraesCS7D01G490500 chr1A 80.921 152 23 4 2774 2923 35399475 35399622 7.900000e-22 115
51 TraesCS7D01G490500 chr2A 94.318 176 10 0 295 470 469790208 469790033 1.590000e-68 270
52 TraesCS7D01G490500 chr3A 84.456 193 29 1 3129 3320 108372594 108372786 4.590000e-44 189
53 TraesCS7D01G490500 chr3A 83.333 198 25 6 3132 3324 120356059 120356253 3.570000e-40 176
54 TraesCS7D01G490500 chr3A 93.103 116 7 1 3367 3482 659020727 659020841 5.980000e-38 169
55 TraesCS7D01G490500 chr2D 95.652 115 4 1 3368 3482 131775663 131775550 2.130000e-42 183
56 TraesCS7D01G490500 chr2D 81.013 158 20 7 2774 2927 72994002 72994153 2.200000e-22 117
57 TraesCS7D01G490500 chr5B 82.828 198 28 6 3129 3323 658101933 658101739 4.620000e-39 172
58 TraesCS7D01G490500 chr5B 82.812 192 28 5 3132 3320 15003150 15003339 2.150000e-37 167
59 TraesCS7D01G490500 chr4B 92.982 114 7 1 3369 3482 591910456 591910344 7.730000e-37 165
60 TraesCS7D01G490500 chr4B 92.661 109 8 0 2921 3029 387491866 387491974 1.290000e-34 158
61 TraesCS7D01G490500 chr3B 92.857 112 8 0 2917 3028 480377209 480377098 2.780000e-36 163
62 TraesCS7D01G490500 chr5D 93.458 107 6 1 2924 3029 538708186 538708292 1.290000e-34 158
63 TraesCS7D01G490500 chr5D 91.743 109 9 0 2921 3029 398454659 398454767 6.020000e-33 152
64 TraesCS7D01G490500 chr2B 82.000 150 23 3 2775 2923 134553518 134553372 1.310000e-24 124
65 TraesCS7D01G490500 chr5A 81.699 153 22 4 2773 2923 664787198 664787346 4.720000e-24 122


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G490500 chr7D 599807426 599810907 3481 True 6431.000000 6431 100.000000 1 3482 1 chr7D.!!$R1 3481
1 TraesCS7D01G490500 chr7D 600448263 600450373 2110 False 796.000000 1637 87.882667 505 2498 3 chr7D.!!$F2 1993
2 TraesCS7D01G490500 chr7D 599797146 599799085 1939 True 701.333333 1421 87.628667 591 2396 3 chr7D.!!$R2 1805
3 TraesCS7D01G490500 chr7B 679670996 679673510 2514 True 3611.000000 3611 93.030000 475 2925 1 chr7B.!!$R2 2450
4 TraesCS7D01G490500 chr7B 679633666 679635600 1934 True 997.000000 1439 86.875000 591 2396 2 chr7B.!!$R3 1805
5 TraesCS7D01G490500 chr7B 679788488 679793726 5238 False 576.500000 913 87.254500 505 2498 4 chr7B.!!$F3 1993
6 TraesCS7D01G490500 chr7A 692338340 692339629 1289 False 1445.000000 1445 86.828000 1178 2495 1 chr7A.!!$F2 1317
7 TraesCS7D01G490500 chr7A 692026050 692027268 1218 True 1382.000000 1382 87.163000 1178 2396 1 chr7A.!!$R1 1218
8 TraesCS7D01G490500 chr7A 692044482 692049992 5510 True 1324.000000 1995 89.812000 475 3481 3 chr7A.!!$R3 3006
9 TraesCS7D01G490500 chr6A 131229429 131230631 1202 False 704.000000 704 77.750000 1301 2485 1 chr6A.!!$F1 1184

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
76 77 0.036388 CAAGCAAAGGGAGCTACGGA 60.036 55.0 0.00 0.00 42.53 4.69 F
181 182 0.098728 GCACATTCGTTTGATCGGGG 59.901 55.0 0.00 0.00 0.00 5.73 F
621 640 0.652592 CAGACCAAACCGATCGCATC 59.347 55.0 10.32 0.22 0.00 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1160 1232 0.752743 CGTACCCCCGTACATGGAGA 60.753 60.0 0.00 0.0 44.41 3.71 R
1161 1233 0.752743 TCGTACCCCCGTACATGGAG 60.753 60.0 0.00 0.0 44.41 3.86 R
2574 8732 0.328258 ATAGACAAAGTTGGCCGCCT 59.672 50.0 11.61 0.0 36.67 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.145228 CTTTCCAAGCCTCGGACTC 57.855 57.895 0.00 0.00 30.29 3.36
28 29 0.391793 CTTTCCAAGCCTCGGACTCC 60.392 60.000 0.00 0.00 30.29 3.85
29 30 1.125093 TTTCCAAGCCTCGGACTCCA 61.125 55.000 0.00 0.00 30.29 3.86
30 31 1.125093 TTCCAAGCCTCGGACTCCAA 61.125 55.000 0.00 0.00 30.29 3.53
31 32 1.078848 CCAAGCCTCGGACTCCAAG 60.079 63.158 0.00 0.00 0.00 3.61
32 33 1.743252 CAAGCCTCGGACTCCAAGC 60.743 63.158 0.00 0.00 0.00 4.01
33 34 2.217038 AAGCCTCGGACTCCAAGCA 61.217 57.895 0.00 0.00 0.00 3.91
34 35 1.768684 AAGCCTCGGACTCCAAGCAA 61.769 55.000 0.00 0.00 0.00 3.91
35 36 1.743252 GCCTCGGACTCCAAGCAAG 60.743 63.158 0.00 0.00 0.00 4.01
36 37 1.674057 CCTCGGACTCCAAGCAAGT 59.326 57.895 0.00 0.00 0.00 3.16
37 38 0.895530 CCTCGGACTCCAAGCAAGTA 59.104 55.000 0.00 0.00 0.00 2.24
38 39 1.134965 CCTCGGACTCCAAGCAAGTAG 60.135 57.143 0.00 0.00 0.00 2.57
39 40 1.546476 CTCGGACTCCAAGCAAGTAGT 59.454 52.381 0.00 0.00 0.00 2.73
40 41 2.753452 CTCGGACTCCAAGCAAGTAGTA 59.247 50.000 0.00 0.00 0.00 1.82
41 42 3.159472 TCGGACTCCAAGCAAGTAGTAA 58.841 45.455 0.00 0.00 0.00 2.24
42 43 3.575256 TCGGACTCCAAGCAAGTAGTAAA 59.425 43.478 0.00 0.00 0.00 2.01
43 44 4.222145 TCGGACTCCAAGCAAGTAGTAAAT 59.778 41.667 0.00 0.00 0.00 1.40
44 45 4.330074 CGGACTCCAAGCAAGTAGTAAATG 59.670 45.833 0.00 0.00 0.00 2.32
45 46 5.488341 GGACTCCAAGCAAGTAGTAAATGA 58.512 41.667 0.00 0.00 0.00 2.57
46 47 6.116126 GGACTCCAAGCAAGTAGTAAATGAT 58.884 40.000 0.00 0.00 0.00 2.45
47 48 7.272978 GGACTCCAAGCAAGTAGTAAATGATA 58.727 38.462 0.00 0.00 0.00 2.15
48 49 7.934120 GGACTCCAAGCAAGTAGTAAATGATAT 59.066 37.037 0.00 0.00 0.00 1.63
49 50 8.894768 ACTCCAAGCAAGTAGTAAATGATATC 57.105 34.615 0.00 0.00 0.00 1.63
50 51 8.486210 ACTCCAAGCAAGTAGTAAATGATATCA 58.514 33.333 8.10 8.10 0.00 2.15
51 52 9.330063 CTCCAAGCAAGTAGTAAATGATATCAA 57.670 33.333 9.99 0.00 0.00 2.57
52 53 9.330063 TCCAAGCAAGTAGTAAATGATATCAAG 57.670 33.333 9.99 0.00 0.00 3.02
53 54 9.330063 CCAAGCAAGTAGTAAATGATATCAAGA 57.670 33.333 9.99 0.00 0.00 3.02
55 56 9.890629 AAGCAAGTAGTAAATGATATCAAGACA 57.109 29.630 9.99 0.00 0.00 3.41
56 57 9.539825 AGCAAGTAGTAAATGATATCAAGACAG 57.460 33.333 9.99 1.32 0.00 3.51
57 58 8.279103 GCAAGTAGTAAATGATATCAAGACAGC 58.721 37.037 9.99 6.61 0.00 4.40
58 59 9.317936 CAAGTAGTAAATGATATCAAGACAGCA 57.682 33.333 9.99 0.00 0.00 4.41
59 60 9.890629 AAGTAGTAAATGATATCAAGACAGCAA 57.109 29.630 9.99 0.00 0.00 3.91
60 61 9.539825 AGTAGTAAATGATATCAAGACAGCAAG 57.460 33.333 9.99 0.00 0.00 4.01
61 62 7.256756 AGTAAATGATATCAAGACAGCAAGC 57.743 36.000 9.99 0.00 0.00 4.01
62 63 6.825213 AGTAAATGATATCAAGACAGCAAGCA 59.175 34.615 9.99 0.00 0.00 3.91
63 64 6.519679 AAATGATATCAAGACAGCAAGCAA 57.480 33.333 9.99 0.00 0.00 3.91
64 65 6.519679 AATGATATCAAGACAGCAAGCAAA 57.480 33.333 9.99 0.00 0.00 3.68
65 66 5.556355 TGATATCAAGACAGCAAGCAAAG 57.444 39.130 1.98 0.00 0.00 2.77
66 67 4.397103 TGATATCAAGACAGCAAGCAAAGG 59.603 41.667 1.98 0.00 0.00 3.11
67 68 1.321474 TCAAGACAGCAAGCAAAGGG 58.679 50.000 0.00 0.00 0.00 3.95
68 69 1.133823 TCAAGACAGCAAGCAAAGGGA 60.134 47.619 0.00 0.00 0.00 4.20
69 70 1.268899 CAAGACAGCAAGCAAAGGGAG 59.731 52.381 0.00 0.00 0.00 4.30
70 71 0.892814 AGACAGCAAGCAAAGGGAGC 60.893 55.000 0.00 0.00 0.00 4.70
71 72 0.892814 GACAGCAAGCAAAGGGAGCT 60.893 55.000 0.00 0.00 45.97 4.09
72 73 0.401738 ACAGCAAGCAAAGGGAGCTA 59.598 50.000 0.00 0.00 42.53 3.32
73 74 0.807496 CAGCAAGCAAAGGGAGCTAC 59.193 55.000 0.00 0.00 42.53 3.58
74 75 0.674895 AGCAAGCAAAGGGAGCTACG 60.675 55.000 0.00 0.00 42.53 3.51
75 76 1.648467 GCAAGCAAAGGGAGCTACGG 61.648 60.000 0.00 0.00 42.53 4.02
76 77 0.036388 CAAGCAAAGGGAGCTACGGA 60.036 55.000 0.00 0.00 42.53 4.69
77 78 0.250513 AAGCAAAGGGAGCTACGGAG 59.749 55.000 0.00 0.00 42.53 4.63
92 93 3.131709 ACGGAGCAATCATAATGGAGG 57.868 47.619 0.00 0.00 0.00 4.30
93 94 2.439507 ACGGAGCAATCATAATGGAGGT 59.560 45.455 0.00 0.00 0.00 3.85
94 95 3.117888 ACGGAGCAATCATAATGGAGGTT 60.118 43.478 0.00 0.00 0.00 3.50
95 96 4.102524 ACGGAGCAATCATAATGGAGGTTA 59.897 41.667 0.00 0.00 0.00 2.85
96 97 4.692625 CGGAGCAATCATAATGGAGGTTAG 59.307 45.833 0.00 0.00 0.00 2.34
97 98 5.006386 GGAGCAATCATAATGGAGGTTAGG 58.994 45.833 0.00 0.00 0.00 2.69
98 99 4.401925 AGCAATCATAATGGAGGTTAGGC 58.598 43.478 0.00 0.00 0.00 3.93
99 100 4.141181 AGCAATCATAATGGAGGTTAGGCA 60.141 41.667 0.00 0.00 0.00 4.75
100 101 4.584325 GCAATCATAATGGAGGTTAGGCAA 59.416 41.667 0.00 0.00 0.00 4.52
101 102 5.507985 GCAATCATAATGGAGGTTAGGCAAC 60.508 44.000 0.00 0.00 0.00 4.17
102 103 3.804036 TCATAATGGAGGTTAGGCAACG 58.196 45.455 0.00 0.00 46.39 4.10
103 104 3.199071 TCATAATGGAGGTTAGGCAACGT 59.801 43.478 0.00 0.00 46.39 3.99
104 105 2.579410 AATGGAGGTTAGGCAACGTT 57.421 45.000 0.00 0.00 46.39 3.99
105 106 2.109425 ATGGAGGTTAGGCAACGTTC 57.891 50.000 0.00 0.00 46.39 3.95
106 107 0.759959 TGGAGGTTAGGCAACGTTCA 59.240 50.000 0.00 0.00 46.39 3.18
107 108 1.349688 TGGAGGTTAGGCAACGTTCAT 59.650 47.619 0.00 0.00 46.39 2.57
108 109 2.224670 TGGAGGTTAGGCAACGTTCATT 60.225 45.455 0.00 0.00 46.39 2.57
109 110 3.008157 TGGAGGTTAGGCAACGTTCATTA 59.992 43.478 0.00 0.00 46.39 1.90
110 111 3.373130 GGAGGTTAGGCAACGTTCATTAC 59.627 47.826 0.00 0.00 46.39 1.89
111 112 4.251268 GAGGTTAGGCAACGTTCATTACT 58.749 43.478 0.00 0.00 46.39 2.24
112 113 4.251268 AGGTTAGGCAACGTTCATTACTC 58.749 43.478 0.00 0.00 46.39 2.59
113 114 4.020485 AGGTTAGGCAACGTTCATTACTCT 60.020 41.667 0.00 0.00 46.39 3.24
114 115 4.694037 GGTTAGGCAACGTTCATTACTCTT 59.306 41.667 0.00 0.00 46.39 2.85
115 116 5.163884 GGTTAGGCAACGTTCATTACTCTTC 60.164 44.000 0.00 0.00 46.39 2.87
116 117 4.002906 AGGCAACGTTCATTACTCTTCA 57.997 40.909 0.00 0.00 46.39 3.02
117 118 4.385825 AGGCAACGTTCATTACTCTTCAA 58.614 39.130 0.00 0.00 46.39 2.69
118 119 5.003804 AGGCAACGTTCATTACTCTTCAAT 58.996 37.500 0.00 0.00 46.39 2.57
119 120 5.473504 AGGCAACGTTCATTACTCTTCAATT 59.526 36.000 0.00 0.00 46.39 2.32
120 121 5.569059 GGCAACGTTCATTACTCTTCAATTG 59.431 40.000 0.00 0.00 0.00 2.32
121 122 6.142817 GCAACGTTCATTACTCTTCAATTGT 58.857 36.000 5.13 0.00 0.00 2.71
122 123 7.295201 GCAACGTTCATTACTCTTCAATTGTA 58.705 34.615 5.13 0.00 0.00 2.41
123 124 7.801315 GCAACGTTCATTACTCTTCAATTGTAA 59.199 33.333 5.13 0.00 0.00 2.41
124 125 9.825972 CAACGTTCATTACTCTTCAATTGTAAT 57.174 29.630 5.13 0.00 37.36 1.89
144 145 7.871853 TGTAATTTTACCTTTGAAGACAGAGC 58.128 34.615 0.00 0.00 32.72 4.09
145 146 7.719633 TGTAATTTTACCTTTGAAGACAGAGCT 59.280 33.333 0.00 0.00 32.72 4.09
146 147 9.216117 GTAATTTTACCTTTGAAGACAGAGCTA 57.784 33.333 0.00 0.00 0.00 3.32
147 148 7.674471 ATTTTACCTTTGAAGACAGAGCTAC 57.326 36.000 0.00 0.00 0.00 3.58
148 149 6.420913 TTTACCTTTGAAGACAGAGCTACT 57.579 37.500 0.00 0.00 0.00 2.57
149 150 7.534723 TTTACCTTTGAAGACAGAGCTACTA 57.465 36.000 0.00 0.00 0.00 1.82
150 151 7.534723 TTACCTTTGAAGACAGAGCTACTAA 57.465 36.000 0.00 0.00 0.00 2.24
151 152 6.613153 ACCTTTGAAGACAGAGCTACTAAT 57.387 37.500 0.00 0.00 0.00 1.73
152 153 7.719871 ACCTTTGAAGACAGAGCTACTAATA 57.280 36.000 0.00 0.00 0.00 0.98
153 154 7.777095 ACCTTTGAAGACAGAGCTACTAATAG 58.223 38.462 0.00 0.00 0.00 1.73
165 166 4.762809 GCTACTAATAGCGATGTTTGCAC 58.237 43.478 0.00 0.00 44.36 4.57
166 167 4.270084 GCTACTAATAGCGATGTTTGCACA 59.730 41.667 0.00 0.00 44.36 4.57
167 168 5.050091 GCTACTAATAGCGATGTTTGCACAT 60.050 40.000 0.00 0.00 44.29 3.21
168 169 5.818136 ACTAATAGCGATGTTTGCACATT 57.182 34.783 0.00 0.00 44.22 2.71
169 170 5.810525 ACTAATAGCGATGTTTGCACATTC 58.189 37.500 0.00 0.00 44.22 2.67
170 171 2.804421 TAGCGATGTTTGCACATTCG 57.196 45.000 0.00 0.00 44.22 3.34
171 172 0.874390 AGCGATGTTTGCACATTCGT 59.126 45.000 9.10 0.00 44.22 3.85
172 173 1.266718 AGCGATGTTTGCACATTCGTT 59.733 42.857 9.10 2.13 44.22 3.85
173 174 2.050691 GCGATGTTTGCACATTCGTTT 58.949 42.857 9.10 0.00 44.22 3.60
174 175 2.160117 GCGATGTTTGCACATTCGTTTG 60.160 45.455 9.10 0.00 44.22 2.93
175 176 3.295785 CGATGTTTGCACATTCGTTTGA 58.704 40.909 0.00 0.00 44.22 2.69
176 177 3.913763 CGATGTTTGCACATTCGTTTGAT 59.086 39.130 0.00 0.00 44.22 2.57
177 178 4.029418 CGATGTTTGCACATTCGTTTGATC 59.971 41.667 0.00 0.00 44.22 2.92
178 179 3.295785 TGTTTGCACATTCGTTTGATCG 58.704 40.909 0.00 0.00 0.00 3.69
179 180 2.610219 TTGCACATTCGTTTGATCGG 57.390 45.000 0.00 0.00 0.00 4.18
180 181 0.801872 TGCACATTCGTTTGATCGGG 59.198 50.000 0.00 0.00 0.00 5.14
181 182 0.098728 GCACATTCGTTTGATCGGGG 59.901 55.000 0.00 0.00 0.00 5.73
182 183 1.448985 CACATTCGTTTGATCGGGGT 58.551 50.000 0.00 0.00 0.00 4.95
183 184 2.623535 CACATTCGTTTGATCGGGGTA 58.376 47.619 0.00 0.00 0.00 3.69
184 185 2.607635 CACATTCGTTTGATCGGGGTAG 59.392 50.000 0.00 0.00 0.00 3.18
185 186 2.498481 ACATTCGTTTGATCGGGGTAGA 59.502 45.455 0.00 0.00 0.00 2.59
186 187 2.660189 TTCGTTTGATCGGGGTAGAC 57.340 50.000 0.00 0.00 0.00 2.59
187 188 1.548081 TCGTTTGATCGGGGTAGACA 58.452 50.000 0.00 0.00 0.00 3.41
188 189 1.894466 TCGTTTGATCGGGGTAGACAA 59.106 47.619 0.00 0.00 0.00 3.18
189 190 2.498481 TCGTTTGATCGGGGTAGACAAT 59.502 45.455 0.00 0.00 0.00 2.71
190 191 3.055675 TCGTTTGATCGGGGTAGACAATT 60.056 43.478 0.00 0.00 0.00 2.32
191 192 3.063452 CGTTTGATCGGGGTAGACAATTG 59.937 47.826 3.24 3.24 0.00 2.32
192 193 3.992943 TTGATCGGGGTAGACAATTGT 57.007 42.857 11.78 11.78 0.00 2.71
193 194 3.260475 TGATCGGGGTAGACAATTGTG 57.740 47.619 17.58 0.00 0.00 3.33
194 195 2.093181 TGATCGGGGTAGACAATTGTGG 60.093 50.000 17.58 0.00 0.00 4.17
195 196 1.354101 TCGGGGTAGACAATTGTGGT 58.646 50.000 17.58 5.52 0.00 4.16
196 197 1.700739 TCGGGGTAGACAATTGTGGTT 59.299 47.619 17.58 3.97 0.00 3.67
197 198 2.106857 TCGGGGTAGACAATTGTGGTTT 59.893 45.455 17.58 1.38 0.00 3.27
198 199 2.888414 CGGGGTAGACAATTGTGGTTTT 59.112 45.455 17.58 0.00 0.00 2.43
199 200 3.319689 CGGGGTAGACAATTGTGGTTTTT 59.680 43.478 17.58 0.00 0.00 1.94
200 201 4.627058 GGGGTAGACAATTGTGGTTTTTG 58.373 43.478 17.58 0.00 0.00 2.44
201 202 4.502431 GGGGTAGACAATTGTGGTTTTTGG 60.502 45.833 17.58 0.00 0.00 3.28
202 203 4.342665 GGGTAGACAATTGTGGTTTTTGGA 59.657 41.667 17.58 0.00 0.00 3.53
203 204 5.163395 GGGTAGACAATTGTGGTTTTTGGAA 60.163 40.000 17.58 0.00 0.00 3.53
204 205 5.751509 GGTAGACAATTGTGGTTTTTGGAAC 59.248 40.000 17.58 0.00 0.00 3.62
205 206 4.765273 AGACAATTGTGGTTTTTGGAACC 58.235 39.130 17.58 1.05 40.67 3.62
206 207 3.874543 GACAATTGTGGTTTTTGGAACCC 59.125 43.478 17.58 0.00 39.54 4.11
207 208 3.210227 CAATTGTGGTTTTTGGAACCCC 58.790 45.455 5.56 0.00 39.54 4.95
208 209 1.952621 TTGTGGTTTTTGGAACCCCA 58.047 45.000 5.56 0.00 41.64 4.96
209 210 2.182516 TGTGGTTTTTGGAACCCCAT 57.817 45.000 5.56 0.00 43.12 4.00
210 211 1.765314 TGTGGTTTTTGGAACCCCATG 59.235 47.619 5.56 0.00 43.12 3.66
211 212 2.043227 GTGGTTTTTGGAACCCCATGA 58.957 47.619 5.56 0.00 43.12 3.07
212 213 2.637382 GTGGTTTTTGGAACCCCATGAT 59.363 45.455 5.56 0.00 43.12 2.45
213 214 2.903135 TGGTTTTTGGAACCCCATGATC 59.097 45.455 5.56 0.00 43.12 2.92
214 215 2.236146 GGTTTTTGGAACCCCATGATCC 59.764 50.000 0.00 0.00 43.12 3.36
215 216 3.173151 GTTTTTGGAACCCCATGATCCT 58.827 45.455 0.00 0.00 43.12 3.24
216 217 3.558608 TTTTGGAACCCCATGATCCTT 57.441 42.857 0.00 0.00 43.12 3.36
217 218 3.558608 TTTGGAACCCCATGATCCTTT 57.441 42.857 0.00 0.00 43.12 3.11
218 219 2.530460 TGGAACCCCATGATCCTTTG 57.470 50.000 0.00 0.00 37.58 2.77
219 220 1.715931 TGGAACCCCATGATCCTTTGT 59.284 47.619 0.00 0.00 37.58 2.83
220 221 2.102578 GGAACCCCATGATCCTTTGTG 58.897 52.381 0.00 0.00 0.00 3.33
221 222 2.557452 GGAACCCCATGATCCTTTGTGT 60.557 50.000 0.00 0.00 0.00 3.72
222 223 3.308832 GGAACCCCATGATCCTTTGTGTA 60.309 47.826 0.00 0.00 0.00 2.90
223 224 4.536765 GAACCCCATGATCCTTTGTGTAT 58.463 43.478 0.00 0.00 0.00 2.29
224 225 4.170468 ACCCCATGATCCTTTGTGTATC 57.830 45.455 0.00 0.00 0.00 2.24
225 226 3.117512 ACCCCATGATCCTTTGTGTATCC 60.118 47.826 0.00 0.00 0.00 2.59
226 227 3.490348 CCCATGATCCTTTGTGTATCCC 58.510 50.000 0.00 0.00 0.00 3.85
227 228 3.117550 CCCATGATCCTTTGTGTATCCCA 60.118 47.826 0.00 0.00 0.00 4.37
228 229 3.885297 CCATGATCCTTTGTGTATCCCAC 59.115 47.826 0.00 0.00 44.78 4.61
229 230 4.385643 CCATGATCCTTTGTGTATCCCACT 60.386 45.833 0.00 0.00 44.81 4.00
230 231 4.927267 TGATCCTTTGTGTATCCCACTT 57.073 40.909 0.00 0.00 44.81 3.16
231 232 6.356556 CATGATCCTTTGTGTATCCCACTTA 58.643 40.000 0.00 0.00 44.81 2.24
232 233 6.381498 TGATCCTTTGTGTATCCCACTTAA 57.619 37.500 0.00 0.00 44.81 1.85
233 234 6.969043 TGATCCTTTGTGTATCCCACTTAAT 58.031 36.000 0.00 0.00 44.81 1.40
234 235 6.828273 TGATCCTTTGTGTATCCCACTTAATG 59.172 38.462 0.00 0.00 44.81 1.90
235 236 6.134535 TCCTTTGTGTATCCCACTTAATGT 57.865 37.500 0.00 0.00 44.81 2.71
236 237 5.943416 TCCTTTGTGTATCCCACTTAATGTG 59.057 40.000 0.00 0.00 44.81 3.21
249 250 6.932356 CACTTAATGTGGTCTATGAGCAAT 57.068 37.500 0.88 0.00 41.75 3.56
251 252 8.613060 CACTTAATGTGGTCTATGAGCAATAT 57.387 34.615 0.88 0.00 41.75 1.28
252 253 9.060347 CACTTAATGTGGTCTATGAGCAATATT 57.940 33.333 0.88 7.93 41.75 1.28
257 258 9.632638 AATGTGGTCTATGAGCAATATTAAACT 57.367 29.630 0.88 0.00 41.75 2.66
258 259 9.632638 ATGTGGTCTATGAGCAATATTAAACTT 57.367 29.630 0.88 0.00 41.75 2.66
259 260 8.892723 TGTGGTCTATGAGCAATATTAAACTTG 58.107 33.333 0.88 0.00 41.75 3.16
260 261 8.345565 GTGGTCTATGAGCAATATTAAACTTGG 58.654 37.037 0.88 0.00 41.75 3.61
261 262 8.052748 TGGTCTATGAGCAATATTAAACTTGGT 58.947 33.333 5.15 5.15 37.11 3.67
262 263 8.903820 GGTCTATGAGCAATATTAAACTTGGTT 58.096 33.333 6.54 0.00 33.55 3.67
317 318 4.368565 AAAAACTACTCCCTCTGTTCCC 57.631 45.455 0.00 0.00 0.00 3.97
318 319 2.715763 AACTACTCCCTCTGTTCCCA 57.284 50.000 0.00 0.00 0.00 4.37
319 320 2.715763 ACTACTCCCTCTGTTCCCAA 57.284 50.000 0.00 0.00 0.00 4.12
320 321 2.986050 ACTACTCCCTCTGTTCCCAAA 58.014 47.619 0.00 0.00 0.00 3.28
321 322 3.532102 ACTACTCCCTCTGTTCCCAAAT 58.468 45.455 0.00 0.00 0.00 2.32
322 323 4.695606 ACTACTCCCTCTGTTCCCAAATA 58.304 43.478 0.00 0.00 0.00 1.40
323 324 5.289510 ACTACTCCCTCTGTTCCCAAATAT 58.710 41.667 0.00 0.00 0.00 1.28
324 325 6.449956 ACTACTCCCTCTGTTCCCAAATATA 58.550 40.000 0.00 0.00 0.00 0.86
325 326 6.906901 ACTACTCCCTCTGTTCCCAAATATAA 59.093 38.462 0.00 0.00 0.00 0.98
326 327 6.253946 ACTCCCTCTGTTCCCAAATATAAG 57.746 41.667 0.00 0.00 0.00 1.73
327 328 5.731678 ACTCCCTCTGTTCCCAAATATAAGT 59.268 40.000 0.00 0.00 0.00 2.24
328 329 6.126739 ACTCCCTCTGTTCCCAAATATAAGTC 60.127 42.308 0.00 0.00 0.00 3.01
329 330 5.970640 TCCCTCTGTTCCCAAATATAAGTCT 59.029 40.000 0.00 0.00 0.00 3.24
330 331 6.447084 TCCCTCTGTTCCCAAATATAAGTCTT 59.553 38.462 0.00 0.00 0.00 3.01
331 332 7.036863 TCCCTCTGTTCCCAAATATAAGTCTTT 60.037 37.037 0.00 0.00 0.00 2.52
332 333 7.283354 CCCTCTGTTCCCAAATATAAGTCTTTC 59.717 40.741 0.00 0.00 0.00 2.62
333 334 8.049721 CCTCTGTTCCCAAATATAAGTCTTTCT 58.950 37.037 0.00 0.00 0.00 2.52
348 349 9.883142 ATAAGTCTTTCTAGAGATTCCAACAAG 57.117 33.333 0.00 0.00 0.00 3.16
349 350 7.309770 AGTCTTTCTAGAGATTCCAACAAGT 57.690 36.000 0.00 0.00 0.00 3.16
350 351 7.158021 AGTCTTTCTAGAGATTCCAACAAGTG 58.842 38.462 0.00 0.00 0.00 3.16
351 352 7.015682 AGTCTTTCTAGAGATTCCAACAAGTGA 59.984 37.037 0.00 0.00 0.00 3.41
352 353 7.117092 GTCTTTCTAGAGATTCCAACAAGTGAC 59.883 40.741 0.00 0.00 0.00 3.67
353 354 6.672266 TTCTAGAGATTCCAACAAGTGACT 57.328 37.500 0.00 0.00 0.00 3.41
354 355 7.776618 TTCTAGAGATTCCAACAAGTGACTA 57.223 36.000 0.00 0.00 0.00 2.59
355 356 7.159322 TCTAGAGATTCCAACAAGTGACTAC 57.841 40.000 0.00 0.00 0.00 2.73
356 357 5.808366 AGAGATTCCAACAAGTGACTACA 57.192 39.130 0.00 0.00 0.00 2.74
357 358 6.365970 AGAGATTCCAACAAGTGACTACAT 57.634 37.500 0.00 0.00 0.00 2.29
358 359 7.482169 AGAGATTCCAACAAGTGACTACATA 57.518 36.000 0.00 0.00 0.00 2.29
359 360 7.324178 AGAGATTCCAACAAGTGACTACATAC 58.676 38.462 0.00 0.00 0.00 2.39
360 361 6.100004 AGATTCCAACAAGTGACTACATACG 58.900 40.000 0.00 0.00 0.00 3.06
361 362 4.182693 TCCAACAAGTGACTACATACGG 57.817 45.455 0.00 0.00 0.00 4.02
362 363 3.827876 TCCAACAAGTGACTACATACGGA 59.172 43.478 0.00 0.00 0.00 4.69
363 364 4.082408 TCCAACAAGTGACTACATACGGAG 60.082 45.833 0.00 0.00 0.00 4.63
364 365 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
365 366 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
366 367 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
367 368 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
368 369 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
369 370 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
370 371 6.216801 AGTGACTACATACGGAGCAAAATA 57.783 37.500 0.00 0.00 0.00 1.40
371 372 6.636705 AGTGACTACATACGGAGCAAAATAA 58.363 36.000 0.00 0.00 0.00 1.40
372 373 7.101054 AGTGACTACATACGGAGCAAAATAAA 58.899 34.615 0.00 0.00 0.00 1.40
373 374 7.769044 AGTGACTACATACGGAGCAAAATAAAT 59.231 33.333 0.00 0.00 0.00 1.40
374 375 7.850982 GTGACTACATACGGAGCAAAATAAATG 59.149 37.037 0.00 0.00 0.00 2.32
375 376 7.766738 TGACTACATACGGAGCAAAATAAATGA 59.233 33.333 0.00 0.00 0.00 2.57
376 377 8.500753 ACTACATACGGAGCAAAATAAATGAA 57.499 30.769 0.00 0.00 0.00 2.57
377 378 9.120538 ACTACATACGGAGCAAAATAAATGAAT 57.879 29.630 0.00 0.00 0.00 2.57
378 379 9.599322 CTACATACGGAGCAAAATAAATGAATC 57.401 33.333 0.00 0.00 0.00 2.52
379 380 8.225603 ACATACGGAGCAAAATAAATGAATCT 57.774 30.769 0.00 0.00 0.00 2.40
380 381 9.337396 ACATACGGAGCAAAATAAATGAATCTA 57.663 29.630 0.00 0.00 0.00 1.98
381 382 9.599322 CATACGGAGCAAAATAAATGAATCTAC 57.401 33.333 0.00 0.00 0.00 2.59
382 383 7.624360 ACGGAGCAAAATAAATGAATCTACA 57.376 32.000 0.00 0.00 0.00 2.74
383 384 7.472543 ACGGAGCAAAATAAATGAATCTACAC 58.527 34.615 0.00 0.00 0.00 2.90
384 385 7.336931 ACGGAGCAAAATAAATGAATCTACACT 59.663 33.333 0.00 0.00 0.00 3.55
385 386 7.852945 CGGAGCAAAATAAATGAATCTACACTC 59.147 37.037 0.00 0.00 0.00 3.51
386 387 8.897752 GGAGCAAAATAAATGAATCTACACTCT 58.102 33.333 0.00 0.00 0.00 3.24
427 428 8.275015 ACATCCGTATGTTGTATTTCATTTGA 57.725 30.769 0.00 0.00 44.07 2.69
428 429 8.735315 ACATCCGTATGTTGTATTTCATTTGAA 58.265 29.630 0.00 0.00 44.07 2.69
429 430 9.566530 CATCCGTATGTTGTATTTCATTTGAAA 57.433 29.630 8.09 8.09 46.60 2.69
462 463 9.868160 AAAAGACTTATATTTAGGAATGGAGGG 57.132 33.333 0.00 0.00 0.00 4.30
463 464 8.814448 AAGACTTATATTTAGGAATGGAGGGA 57.186 34.615 0.00 0.00 0.00 4.20
464 465 8.442660 AGACTTATATTTAGGAATGGAGGGAG 57.557 38.462 0.00 0.00 0.00 4.30
465 466 8.019652 AGACTTATATTTAGGAATGGAGGGAGT 58.980 37.037 0.00 0.00 0.00 3.85
466 467 9.322769 GACTTATATTTAGGAATGGAGGGAGTA 57.677 37.037 0.00 0.00 0.00 2.59
467 468 9.684702 ACTTATATTTAGGAATGGAGGGAGTAA 57.315 33.333 0.00 0.00 0.00 2.24
472 473 4.984146 AGGAATGGAGGGAGTAATAAGC 57.016 45.455 0.00 0.00 0.00 3.09
473 474 4.571951 AGGAATGGAGGGAGTAATAAGCT 58.428 43.478 0.00 0.00 0.00 3.74
480 481 4.370049 GAGGGAGTAATAAGCTTTCCGAC 58.630 47.826 3.20 0.00 0.00 4.79
484 485 4.444720 GGAGTAATAAGCTTTCCGACGATG 59.555 45.833 3.20 0.00 0.00 3.84
518 524 8.655651 CTTAATTAGCAAAACCTTCCACAAAA 57.344 30.769 0.00 0.00 0.00 2.44
562 568 3.447586 TCCGTCTCTCCCAAACTAATCAG 59.552 47.826 0.00 0.00 0.00 2.90
589 595 7.229907 GCTATTTACGATCTTAAAAATCCCCCA 59.770 37.037 8.31 0.00 0.00 4.96
619 638 1.375396 CCAGACCAAACCGATCGCA 60.375 57.895 10.32 0.00 0.00 5.10
620 639 0.744414 CCAGACCAAACCGATCGCAT 60.744 55.000 10.32 0.00 0.00 4.73
621 640 0.652592 CAGACCAAACCGATCGCATC 59.347 55.000 10.32 0.22 0.00 3.91
805 877 0.947660 GAACAACTCCCCGACGTTCC 60.948 60.000 0.00 0.00 31.82 3.62
911 983 3.996124 CTGGGCCGCCGATCCTAG 61.996 72.222 2.55 0.00 0.00 3.02
1160 1232 2.047443 GGAGCGAAGACTCGGAGGT 61.047 63.158 10.23 0.00 45.55 3.85
1161 1233 1.430228 GAGCGAAGACTCGGAGGTC 59.570 63.158 10.23 4.89 45.55 3.85
1890 4891 1.666553 CAACAACTGCCTCGCCGTA 60.667 57.895 0.00 0.00 0.00 4.02
2039 8170 2.264480 CCACATCTCCGGCGACAA 59.736 61.111 9.30 0.00 0.00 3.18
2083 8214 2.537560 CGCGAGATGCAATGGGACC 61.538 63.158 0.00 0.00 46.97 4.46
2345 8476 2.184322 GACGGCGCATCAGAAGGA 59.816 61.111 10.83 0.00 0.00 3.36
2576 8734 6.872628 TCTGCTGAAGAAATATATTGCAGG 57.127 37.500 22.84 11.58 44.44 4.85
2577 8735 5.240183 TCTGCTGAAGAAATATATTGCAGGC 59.760 40.000 22.84 13.97 44.44 4.85
2578 8736 4.023792 TGCTGAAGAAATATATTGCAGGCG 60.024 41.667 6.21 0.00 0.00 5.52
2579 8737 4.614535 GCTGAAGAAATATATTGCAGGCGG 60.615 45.833 6.21 1.42 0.00 6.13
2580 8738 3.253188 TGAAGAAATATATTGCAGGCGGC 59.747 43.478 6.21 0.00 45.13 6.53
2586 8745 0.684153 ATATTGCAGGCGGCCAACTT 60.684 50.000 23.09 4.29 43.89 2.66
2620 8779 2.143122 GAGCTGTCCATGAAACGAACA 58.857 47.619 0.00 0.00 0.00 3.18
2749 8916 9.932207 TTTGACAAAAGAGTACCGAGATTATTA 57.068 29.630 0.00 0.00 0.00 0.98
2750 8917 8.922058 TGACAAAAGAGTACCGAGATTATTAC 57.078 34.615 0.00 0.00 0.00 1.89
2751 8918 8.746530 TGACAAAAGAGTACCGAGATTATTACT 58.253 33.333 0.00 0.00 0.00 2.24
2753 8920 9.367444 ACAAAAGAGTACCGAGATTATTACTTG 57.633 33.333 0.00 0.00 0.00 3.16
2769 8939 9.762381 ATTATTACTTGATAGGAACCCAAAACA 57.238 29.630 0.00 0.00 0.00 2.83
2930 9107 9.830186 ACTGATATTTGATACTATGTACTCCCT 57.170 33.333 0.00 0.00 0.00 4.20
2932 9109 9.256228 TGATATTTGATACTATGTACTCCCTCC 57.744 37.037 0.00 0.00 0.00 4.30
2933 9110 9.256228 GATATTTGATACTATGTACTCCCTCCA 57.744 37.037 0.00 0.00 0.00 3.86
2934 9111 9.790297 ATATTTGATACTATGTACTCCCTCCAT 57.210 33.333 0.00 0.00 0.00 3.41
2935 9112 7.931015 TTTGATACTATGTACTCCCTCCATT 57.069 36.000 0.00 0.00 0.00 3.16
2936 9113 7.540474 TTGATACTATGTACTCCCTCCATTC 57.460 40.000 0.00 0.00 0.00 2.67
2937 9114 6.017192 TGATACTATGTACTCCCTCCATTCC 58.983 44.000 0.00 0.00 0.00 3.01
2938 9115 3.231818 ACTATGTACTCCCTCCATTCCG 58.768 50.000 0.00 0.00 0.00 4.30
2939 9116 2.176247 ATGTACTCCCTCCATTCCGT 57.824 50.000 0.00 0.00 0.00 4.69
2940 9117 1.946984 TGTACTCCCTCCATTCCGTT 58.053 50.000 0.00 0.00 0.00 4.44
2941 9118 3.104519 TGTACTCCCTCCATTCCGTTA 57.895 47.619 0.00 0.00 0.00 3.18
2942 9119 3.649843 TGTACTCCCTCCATTCCGTTAT 58.350 45.455 0.00 0.00 0.00 1.89
2943 9120 4.806892 TGTACTCCCTCCATTCCGTTATA 58.193 43.478 0.00 0.00 0.00 0.98
2944 9121 4.586001 TGTACTCCCTCCATTCCGTTATAC 59.414 45.833 0.00 0.00 0.00 1.47
2945 9122 3.649843 ACTCCCTCCATTCCGTTATACA 58.350 45.455 0.00 0.00 0.00 2.29
2946 9123 4.035112 ACTCCCTCCATTCCGTTATACAA 58.965 43.478 0.00 0.00 0.00 2.41
2947 9124 4.101119 ACTCCCTCCATTCCGTTATACAAG 59.899 45.833 0.00 0.00 0.00 3.16
2948 9125 4.291792 TCCCTCCATTCCGTTATACAAGA 58.708 43.478 0.00 0.00 0.00 3.02
2949 9126 4.905456 TCCCTCCATTCCGTTATACAAGAT 59.095 41.667 0.00 0.00 0.00 2.40
2950 9127 4.997395 CCCTCCATTCCGTTATACAAGATG 59.003 45.833 0.00 0.00 0.00 2.90
2951 9128 5.454755 CCCTCCATTCCGTTATACAAGATGT 60.455 44.000 0.00 0.00 0.00 3.06
2952 9129 6.239487 CCCTCCATTCCGTTATACAAGATGTA 60.239 42.308 0.00 0.00 37.24 2.29
2953 9130 7.386851 CCTCCATTCCGTTATACAAGATGTAT 58.613 38.462 8.00 8.00 44.89 2.29
2954 9131 7.878127 CCTCCATTCCGTTATACAAGATGTATT 59.122 37.037 8.19 0.00 40.40 1.89
2955 9132 9.273016 CTCCATTCCGTTATACAAGATGTATTT 57.727 33.333 8.19 0.00 40.40 1.40
2956 9133 9.051679 TCCATTCCGTTATACAAGATGTATTTG 57.948 33.333 8.19 0.47 40.40 2.32
2957 9134 8.836413 CCATTCCGTTATACAAGATGTATTTGT 58.164 33.333 8.19 0.00 40.40 2.83
2969 9146 9.665719 ACAAGATGTATTTGTTTTTCCAAAAGT 57.334 25.926 0.00 0.00 37.81 2.66
2971 9148 9.883142 AAGATGTATTTGTTTTTCCAAAAGTCA 57.117 25.926 0.00 0.00 37.81 3.41
2972 9149 9.883142 AGATGTATTTGTTTTTCCAAAAGTCAA 57.117 25.926 0.00 2.48 37.81 3.18
2975 9152 8.436200 TGTATTTGTTTTTCCAAAAGTCAAACG 58.564 29.630 13.96 0.00 37.81 3.60
2976 9153 7.659652 ATTTGTTTTTCCAAAAGTCAAACGA 57.340 28.000 13.96 0.00 37.81 3.85
2977 9154 6.698359 TTGTTTTTCCAAAAGTCAAACGAG 57.302 33.333 0.00 0.00 31.24 4.18
2978 9155 5.774630 TGTTTTTCCAAAAGTCAAACGAGT 58.225 33.333 0.00 0.00 31.24 4.18
2979 9156 5.631512 TGTTTTTCCAAAAGTCAAACGAGTG 59.368 36.000 0.00 0.00 31.24 3.51
2980 9157 3.414549 TTCCAAAAGTCAAACGAGTGC 57.585 42.857 0.00 0.00 0.00 4.40
2981 9158 2.360844 TCCAAAAGTCAAACGAGTGCA 58.639 42.857 0.00 0.00 0.00 4.57
2982 9159 2.948979 TCCAAAAGTCAAACGAGTGCAT 59.051 40.909 0.00 0.00 0.00 3.96
2983 9160 3.044986 CCAAAAGTCAAACGAGTGCATG 58.955 45.455 0.00 0.00 0.00 4.06
2984 9161 3.489059 CCAAAAGTCAAACGAGTGCATGT 60.489 43.478 0.00 0.00 0.00 3.21
2985 9162 4.104776 CAAAAGTCAAACGAGTGCATGTT 58.895 39.130 0.00 0.00 0.00 2.71
2986 9163 4.370364 AAAGTCAAACGAGTGCATGTTT 57.630 36.364 8.36 8.36 38.76 2.83
2991 9168 3.338818 AAACGAGTGCATGTTTGACTG 57.661 42.857 12.15 0.00 36.96 3.51
2992 9169 2.238942 ACGAGTGCATGTTTGACTGA 57.761 45.000 0.00 0.00 0.00 3.41
2993 9170 2.138320 ACGAGTGCATGTTTGACTGAG 58.862 47.619 0.00 0.00 0.00 3.35
2994 9171 2.138320 CGAGTGCATGTTTGACTGAGT 58.862 47.619 0.00 0.00 0.00 3.41
2995 9172 2.545526 CGAGTGCATGTTTGACTGAGTT 59.454 45.455 0.00 0.00 0.00 3.01
2996 9173 3.002656 CGAGTGCATGTTTGACTGAGTTT 59.997 43.478 0.00 0.00 0.00 2.66
2997 9174 4.496341 CGAGTGCATGTTTGACTGAGTTTT 60.496 41.667 0.00 0.00 0.00 2.43
2998 9175 5.329035 AGTGCATGTTTGACTGAGTTTTT 57.671 34.783 0.00 0.00 0.00 1.94
2999 9176 6.449635 AGTGCATGTTTGACTGAGTTTTTA 57.550 33.333 0.00 0.00 0.00 1.52
3000 9177 6.498304 AGTGCATGTTTGACTGAGTTTTTAG 58.502 36.000 0.00 0.00 0.00 1.85
3001 9178 6.318648 AGTGCATGTTTGACTGAGTTTTTAGA 59.681 34.615 0.00 0.00 0.00 2.10
3002 9179 6.972328 GTGCATGTTTGACTGAGTTTTTAGAA 59.028 34.615 0.00 0.00 0.00 2.10
3003 9180 7.487829 GTGCATGTTTGACTGAGTTTTTAGAAA 59.512 33.333 0.00 0.00 0.00 2.52
3004 9181 8.031864 TGCATGTTTGACTGAGTTTTTAGAAAA 58.968 29.630 0.00 0.00 0.00 2.29
3005 9182 8.868916 GCATGTTTGACTGAGTTTTTAGAAAAA 58.131 29.630 0.00 0.00 35.67 1.94
3033 9210 7.969536 ATCAATATCCACAATACGAAGGAAG 57.030 36.000 0.00 0.00 33.17 3.46
3034 9211 7.119709 TCAATATCCACAATACGAAGGAAGA 57.880 36.000 0.00 0.00 33.17 2.87
3035 9212 7.210174 TCAATATCCACAATACGAAGGAAGAG 58.790 38.462 0.00 0.00 33.17 2.85
3036 9213 3.247006 TCCACAATACGAAGGAAGAGC 57.753 47.619 0.00 0.00 0.00 4.09
3037 9214 1.927174 CCACAATACGAAGGAAGAGCG 59.073 52.381 0.00 0.00 0.00 5.03
3038 9215 2.607187 CACAATACGAAGGAAGAGCGT 58.393 47.619 0.00 0.00 41.58 5.07
3039 9216 2.345641 CACAATACGAAGGAAGAGCGTG 59.654 50.000 0.00 0.00 38.84 5.34
3040 9217 2.029290 ACAATACGAAGGAAGAGCGTGT 60.029 45.455 0.00 0.00 38.84 4.49
3041 9218 2.279582 ATACGAAGGAAGAGCGTGTG 57.720 50.000 0.00 0.00 38.84 3.82
3042 9219 0.956633 TACGAAGGAAGAGCGTGTGT 59.043 50.000 0.00 0.00 38.84 3.72
3043 9220 0.104304 ACGAAGGAAGAGCGTGTGTT 59.896 50.000 0.00 0.00 36.83 3.32
3044 9221 0.784778 CGAAGGAAGAGCGTGTGTTC 59.215 55.000 0.00 0.00 0.00 3.18
3045 9222 1.603172 CGAAGGAAGAGCGTGTGTTCT 60.603 52.381 0.00 0.00 37.25 3.01
3046 9223 2.484889 GAAGGAAGAGCGTGTGTTCTT 58.515 47.619 0.00 0.00 46.76 2.52
3047 9224 2.622064 AGGAAGAGCGTGTGTTCTTT 57.378 45.000 0.00 0.00 44.50 2.52
3048 9225 2.919228 AGGAAGAGCGTGTGTTCTTTT 58.081 42.857 0.00 0.00 44.50 2.27
3049 9226 3.279434 AGGAAGAGCGTGTGTTCTTTTT 58.721 40.909 0.00 0.00 44.50 1.94
3098 9275 6.478512 AGGAAATTTGCCAAAAAGAGTACA 57.521 33.333 6.02 0.00 0.00 2.90
3099 9276 6.515832 AGGAAATTTGCCAAAAAGAGTACAG 58.484 36.000 6.02 0.00 0.00 2.74
3100 9277 6.323739 AGGAAATTTGCCAAAAAGAGTACAGA 59.676 34.615 6.02 0.00 0.00 3.41
3101 9278 7.015584 AGGAAATTTGCCAAAAAGAGTACAGAT 59.984 33.333 6.02 0.00 0.00 2.90
3102 9279 8.303876 GGAAATTTGCCAAAAAGAGTACAGATA 58.696 33.333 0.00 0.00 0.00 1.98
3103 9280 9.860898 GAAATTTGCCAAAAAGAGTACAGATAT 57.139 29.630 0.00 0.00 0.00 1.63
3143 9320 6.042143 CCAAAACGGGATAATTTTGATGAGG 58.958 40.000 10.26 0.00 44.85 3.86
3144 9321 6.350949 CCAAAACGGGATAATTTTGATGAGGT 60.351 38.462 10.26 0.00 44.85 3.85
3145 9322 5.835113 AACGGGATAATTTTGATGAGGTG 57.165 39.130 0.00 0.00 0.00 4.00
3146 9323 4.207165 ACGGGATAATTTTGATGAGGTGG 58.793 43.478 0.00 0.00 0.00 4.61
3147 9324 3.004734 CGGGATAATTTTGATGAGGTGGC 59.995 47.826 0.00 0.00 0.00 5.01
3148 9325 3.960102 GGGATAATTTTGATGAGGTGGCA 59.040 43.478 0.00 0.00 0.00 4.92
3149 9326 4.590222 GGGATAATTTTGATGAGGTGGCAT 59.410 41.667 0.00 0.00 0.00 4.40
3150 9327 5.774690 GGGATAATTTTGATGAGGTGGCATA 59.225 40.000 0.00 0.00 0.00 3.14
3151 9328 6.071728 GGGATAATTTTGATGAGGTGGCATAG 60.072 42.308 0.00 0.00 0.00 2.23
3152 9329 6.716628 GGATAATTTTGATGAGGTGGCATAGA 59.283 38.462 0.00 0.00 0.00 1.98
3153 9330 7.231317 GGATAATTTTGATGAGGTGGCATAGAA 59.769 37.037 0.00 0.00 0.00 2.10
3154 9331 8.716674 ATAATTTTGATGAGGTGGCATAGAAT 57.283 30.769 0.00 0.00 0.00 2.40
3155 9332 7.427989 AATTTTGATGAGGTGGCATAGAATT 57.572 32.000 0.00 0.00 0.00 2.17
3156 9333 8.537728 AATTTTGATGAGGTGGCATAGAATTA 57.462 30.769 0.00 0.00 0.00 1.40
3157 9334 7.953005 TTTTGATGAGGTGGCATAGAATTAA 57.047 32.000 0.00 0.00 0.00 1.40
3158 9335 7.572523 TTTGATGAGGTGGCATAGAATTAAG 57.427 36.000 0.00 0.00 0.00 1.85
3159 9336 6.252599 TGATGAGGTGGCATAGAATTAAGT 57.747 37.500 0.00 0.00 0.00 2.24
3160 9337 7.373617 TGATGAGGTGGCATAGAATTAAGTA 57.626 36.000 0.00 0.00 0.00 2.24
3161 9338 7.445121 TGATGAGGTGGCATAGAATTAAGTAG 58.555 38.462 0.00 0.00 0.00 2.57
3162 9339 7.290014 TGATGAGGTGGCATAGAATTAAGTAGA 59.710 37.037 0.00 0.00 0.00 2.59
3163 9340 7.055667 TGAGGTGGCATAGAATTAAGTAGAG 57.944 40.000 0.00 0.00 0.00 2.43
3164 9341 6.839134 TGAGGTGGCATAGAATTAAGTAGAGA 59.161 38.462 0.00 0.00 0.00 3.10
3165 9342 7.344612 TGAGGTGGCATAGAATTAAGTAGAGAA 59.655 37.037 0.00 0.00 0.00 2.87
3166 9343 8.090788 AGGTGGCATAGAATTAAGTAGAGAAA 57.909 34.615 0.00 0.00 0.00 2.52
3167 9344 8.207545 AGGTGGCATAGAATTAAGTAGAGAAAG 58.792 37.037 0.00 0.00 0.00 2.62
3168 9345 8.204836 GGTGGCATAGAATTAAGTAGAGAAAGA 58.795 37.037 0.00 0.00 0.00 2.52
3169 9346 9.255304 GTGGCATAGAATTAAGTAGAGAAAGAG 57.745 37.037 0.00 0.00 0.00 2.85
3170 9347 9.201989 TGGCATAGAATTAAGTAGAGAAAGAGA 57.798 33.333 0.00 0.00 0.00 3.10
3234 9411 9.243105 TGCTATAGTACTATATGTCTTGCATGA 57.757 33.333 20.38 0.00 38.47 3.07
3235 9412 9.509855 GCTATAGTACTATATGTCTTGCATGAC 57.490 37.037 22.34 22.34 38.47 3.06
3246 9423 5.771469 TGTCTTGCATGACAACAAATAAGG 58.229 37.500 27.68 0.00 43.08 2.69
3247 9424 5.301551 TGTCTTGCATGACAACAAATAAGGT 59.698 36.000 27.68 0.00 43.08 3.50
3248 9425 5.858581 GTCTTGCATGACAACAAATAAGGTC 59.141 40.000 23.72 0.00 36.97 3.85
3249 9426 5.534278 TCTTGCATGACAACAAATAAGGTCA 59.466 36.000 0.00 0.00 43.61 4.02
3256 9433 8.862325 ATGACAACAAATAAGGTCATGTAAGA 57.138 30.769 5.42 0.00 46.15 2.10
3257 9434 8.862325 TGACAACAAATAAGGTCATGTAAGAT 57.138 30.769 0.00 0.00 35.51 2.40
3258 9435 9.952030 TGACAACAAATAAGGTCATGTAAGATA 57.048 29.630 0.00 0.00 35.51 1.98
3260 9437 9.959721 ACAACAAATAAGGTCATGTAAGATACT 57.040 29.630 0.00 0.00 0.00 2.12
3269 9446 8.727100 AGGTCATGTAAGATACTGATATTGGA 57.273 34.615 0.00 0.00 0.00 3.53
3270 9447 9.331466 AGGTCATGTAAGATACTGATATTGGAT 57.669 33.333 0.00 0.00 0.00 3.41
3293 9470 9.103861 GGATACTATGTATTACCGAGGTAGTAC 57.896 40.741 21.04 21.04 41.28 2.73
3298 9475 9.624373 CTATGTATTACCGAGGTAGTACCATAT 57.376 37.037 23.36 16.13 41.95 1.78
3307 9484 9.844257 ACCGAGGTAGTACCATATATTAGTATC 57.156 37.037 21.49 4.64 41.95 2.24
3336 9514 7.308782 GCATGATATTAATGCTACCCACTAC 57.691 40.000 14.09 0.00 45.62 2.73
3339 9517 6.464222 TGATATTAATGCTACCCACTACAGC 58.536 40.000 0.00 0.00 35.82 4.40
3342 9520 1.596934 TGCTACCCACTACAGCAGC 59.403 57.895 0.00 0.00 40.26 5.25
3343 9521 1.191489 TGCTACCCACTACAGCAGCA 61.191 55.000 0.00 0.00 40.26 4.41
3348 9527 1.909302 ACCCACTACAGCAGCATAACT 59.091 47.619 0.00 0.00 0.00 2.24
3354 9533 6.051717 CCACTACAGCAGCATAACTAATCTT 58.948 40.000 0.00 0.00 0.00 2.40
3357 9536 7.493971 CACTACAGCAGCATAACTAATCTTCTT 59.506 37.037 0.00 0.00 0.00 2.52
3362 9541 8.763356 CAGCAGCATAACTAATCTTCTTCTTAG 58.237 37.037 0.00 0.00 0.00 2.18
3405 9584 8.469309 TTTCCCAATCTATTCATCTTCAATCC 57.531 34.615 0.00 0.00 0.00 3.01
3408 9587 6.433404 CCCAATCTATTCATCTTCAATCCTGG 59.567 42.308 0.00 0.00 0.00 4.45
3468 9647 1.001120 TCCATGGACCACCTAGCGA 59.999 57.895 11.44 0.00 37.04 4.93
3472 9651 1.384989 ATGGACCACCTAGCGACGAG 61.385 60.000 0.00 0.00 37.04 4.18
3481 9660 1.536149 CTAGCGACGAGTACAAGCAC 58.464 55.000 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 1.125093 TGGAGTCCGAGGCTTGGAAA 61.125 55.000 25.16 8.66 37.23 3.13
11 12 1.125093 TTGGAGTCCGAGGCTTGGAA 61.125 55.000 25.16 6.94 37.23 3.53
12 13 1.535444 TTGGAGTCCGAGGCTTGGA 60.535 57.895 19.96 19.96 0.00 3.53
13 14 1.078848 CTTGGAGTCCGAGGCTTGG 60.079 63.158 17.89 15.18 31.55 3.61
14 15 1.743252 GCTTGGAGTCCGAGGCTTG 60.743 63.158 25.28 3.56 35.62 4.01
15 16 1.768684 TTGCTTGGAGTCCGAGGCTT 61.769 55.000 25.28 0.00 35.62 4.35
16 17 2.177594 CTTGCTTGGAGTCCGAGGCT 62.178 60.000 25.28 0.00 35.62 4.58
17 18 1.743252 CTTGCTTGGAGTCCGAGGC 60.743 63.158 25.28 18.34 35.62 4.70
18 19 0.895530 TACTTGCTTGGAGTCCGAGG 59.104 55.000 25.28 12.91 35.62 4.63
19 20 1.546476 ACTACTTGCTTGGAGTCCGAG 59.454 52.381 20.91 20.91 38.05 4.63
20 21 1.629043 ACTACTTGCTTGGAGTCCGA 58.371 50.000 4.30 0.84 0.00 4.55
21 22 3.587797 TTACTACTTGCTTGGAGTCCG 57.412 47.619 4.30 0.00 0.00 4.79
22 23 5.488341 TCATTTACTACTTGCTTGGAGTCC 58.512 41.667 0.73 0.73 0.00 3.85
23 24 8.894768 ATATCATTTACTACTTGCTTGGAGTC 57.105 34.615 0.00 0.00 0.00 3.36
24 25 8.486210 TGATATCATTTACTACTTGCTTGGAGT 58.514 33.333 0.00 0.47 0.00 3.85
25 26 8.893219 TGATATCATTTACTACTTGCTTGGAG 57.107 34.615 0.00 0.00 0.00 3.86
26 27 9.330063 CTTGATATCATTTACTACTTGCTTGGA 57.670 33.333 6.17 0.00 0.00 3.53
27 28 9.330063 TCTTGATATCATTTACTACTTGCTTGG 57.670 33.333 6.17 0.00 0.00 3.61
29 30 9.890629 TGTCTTGATATCATTTACTACTTGCTT 57.109 29.630 6.17 0.00 0.00 3.91
30 31 9.539825 CTGTCTTGATATCATTTACTACTTGCT 57.460 33.333 6.17 0.00 0.00 3.91
31 32 8.279103 GCTGTCTTGATATCATTTACTACTTGC 58.721 37.037 6.17 4.95 0.00 4.01
32 33 9.317936 TGCTGTCTTGATATCATTTACTACTTG 57.682 33.333 6.17 0.00 0.00 3.16
33 34 9.890629 TTGCTGTCTTGATATCATTTACTACTT 57.109 29.630 6.17 0.00 0.00 2.24
34 35 9.539825 CTTGCTGTCTTGATATCATTTACTACT 57.460 33.333 6.17 0.00 0.00 2.57
35 36 8.279103 GCTTGCTGTCTTGATATCATTTACTAC 58.721 37.037 6.17 0.30 0.00 2.73
36 37 7.986889 TGCTTGCTGTCTTGATATCATTTACTA 59.013 33.333 6.17 0.00 0.00 1.82
37 38 6.825213 TGCTTGCTGTCTTGATATCATTTACT 59.175 34.615 6.17 0.00 0.00 2.24
38 39 7.019774 TGCTTGCTGTCTTGATATCATTTAC 57.980 36.000 6.17 6.02 0.00 2.01
39 40 7.628769 TTGCTTGCTGTCTTGATATCATTTA 57.371 32.000 6.17 0.00 0.00 1.40
40 41 6.519679 TTGCTTGCTGTCTTGATATCATTT 57.480 33.333 6.17 0.00 0.00 2.32
41 42 6.405508 CCTTTGCTTGCTGTCTTGATATCATT 60.406 38.462 6.17 0.00 0.00 2.57
42 43 5.067413 CCTTTGCTTGCTGTCTTGATATCAT 59.933 40.000 6.17 0.00 0.00 2.45
43 44 4.397103 CCTTTGCTTGCTGTCTTGATATCA 59.603 41.667 0.00 0.00 0.00 2.15
44 45 4.201990 CCCTTTGCTTGCTGTCTTGATATC 60.202 45.833 0.00 0.00 0.00 1.63
45 46 3.698040 CCCTTTGCTTGCTGTCTTGATAT 59.302 43.478 0.00 0.00 0.00 1.63
46 47 3.084039 CCCTTTGCTTGCTGTCTTGATA 58.916 45.455 0.00 0.00 0.00 2.15
47 48 1.891150 CCCTTTGCTTGCTGTCTTGAT 59.109 47.619 0.00 0.00 0.00 2.57
48 49 1.133823 TCCCTTTGCTTGCTGTCTTGA 60.134 47.619 0.00 0.00 0.00 3.02
49 50 1.268899 CTCCCTTTGCTTGCTGTCTTG 59.731 52.381 0.00 0.00 0.00 3.02
50 51 1.613836 CTCCCTTTGCTTGCTGTCTT 58.386 50.000 0.00 0.00 0.00 3.01
51 52 0.892814 GCTCCCTTTGCTTGCTGTCT 60.893 55.000 0.00 0.00 0.00 3.41
52 53 0.892814 AGCTCCCTTTGCTTGCTGTC 60.893 55.000 0.00 0.00 37.52 3.51
53 54 0.401738 TAGCTCCCTTTGCTTGCTGT 59.598 50.000 0.00 0.00 41.46 4.40
54 55 0.807496 GTAGCTCCCTTTGCTTGCTG 59.193 55.000 0.00 0.00 41.46 4.41
55 56 0.674895 CGTAGCTCCCTTTGCTTGCT 60.675 55.000 0.00 0.00 41.46 3.91
56 57 1.648467 CCGTAGCTCCCTTTGCTTGC 61.648 60.000 0.00 0.00 41.46 4.01
57 58 0.036388 TCCGTAGCTCCCTTTGCTTG 60.036 55.000 0.00 0.00 41.46 4.01
58 59 0.250513 CTCCGTAGCTCCCTTTGCTT 59.749 55.000 0.00 0.00 41.46 3.91
59 60 1.901085 CTCCGTAGCTCCCTTTGCT 59.099 57.895 0.00 0.00 43.79 3.91
60 61 1.815840 GCTCCGTAGCTCCCTTTGC 60.816 63.158 0.00 0.00 45.85 3.68
61 62 4.522971 GCTCCGTAGCTCCCTTTG 57.477 61.111 0.00 0.00 45.85 2.77
70 71 4.248859 CCTCCATTATGATTGCTCCGTAG 58.751 47.826 0.00 0.00 0.00 3.51
71 72 3.646162 ACCTCCATTATGATTGCTCCGTA 59.354 43.478 0.00 0.00 0.00 4.02
72 73 2.439507 ACCTCCATTATGATTGCTCCGT 59.560 45.455 0.00 0.00 0.00 4.69
73 74 3.131709 ACCTCCATTATGATTGCTCCG 57.868 47.619 0.00 0.00 0.00 4.63
74 75 5.006386 CCTAACCTCCATTATGATTGCTCC 58.994 45.833 0.00 0.00 0.00 4.70
75 76 4.457257 GCCTAACCTCCATTATGATTGCTC 59.543 45.833 0.00 0.00 0.00 4.26
76 77 4.141181 TGCCTAACCTCCATTATGATTGCT 60.141 41.667 0.00 0.00 0.00 3.91
77 78 4.144297 TGCCTAACCTCCATTATGATTGC 58.856 43.478 0.00 0.00 0.00 3.56
78 79 5.277974 CGTTGCCTAACCTCCATTATGATTG 60.278 44.000 0.00 0.00 33.12 2.67
79 80 4.821805 CGTTGCCTAACCTCCATTATGATT 59.178 41.667 0.00 0.00 33.12 2.57
80 81 4.141482 ACGTTGCCTAACCTCCATTATGAT 60.141 41.667 0.00 0.00 33.12 2.45
81 82 3.199071 ACGTTGCCTAACCTCCATTATGA 59.801 43.478 0.00 0.00 33.12 2.15
82 83 3.541632 ACGTTGCCTAACCTCCATTATG 58.458 45.455 0.00 0.00 33.12 1.90
83 84 3.926058 ACGTTGCCTAACCTCCATTAT 57.074 42.857 0.00 0.00 33.12 1.28
84 85 3.008157 TGAACGTTGCCTAACCTCCATTA 59.992 43.478 5.00 0.00 33.12 1.90
85 86 2.224670 TGAACGTTGCCTAACCTCCATT 60.225 45.455 5.00 0.00 33.12 3.16
86 87 1.349688 TGAACGTTGCCTAACCTCCAT 59.650 47.619 5.00 0.00 33.12 3.41
87 88 0.759959 TGAACGTTGCCTAACCTCCA 59.240 50.000 5.00 0.00 33.12 3.86
88 89 2.109425 ATGAACGTTGCCTAACCTCC 57.891 50.000 5.00 0.00 33.12 4.30
89 90 4.251268 AGTAATGAACGTTGCCTAACCTC 58.749 43.478 5.00 0.00 33.12 3.85
90 91 4.020485 AGAGTAATGAACGTTGCCTAACCT 60.020 41.667 5.00 0.00 33.12 3.50
91 92 4.251268 AGAGTAATGAACGTTGCCTAACC 58.749 43.478 5.00 0.00 33.12 2.85
92 93 5.407387 TGAAGAGTAATGAACGTTGCCTAAC 59.593 40.000 5.00 0.00 0.00 2.34
93 94 5.543714 TGAAGAGTAATGAACGTTGCCTAA 58.456 37.500 5.00 0.00 0.00 2.69
94 95 5.142061 TGAAGAGTAATGAACGTTGCCTA 57.858 39.130 5.00 0.00 0.00 3.93
95 96 4.002906 TGAAGAGTAATGAACGTTGCCT 57.997 40.909 5.00 0.00 0.00 4.75
96 97 4.742438 TTGAAGAGTAATGAACGTTGCC 57.258 40.909 5.00 0.00 0.00 4.52
97 98 6.142817 ACAATTGAAGAGTAATGAACGTTGC 58.857 36.000 13.59 0.00 0.00 4.17
98 99 9.825972 ATTACAATTGAAGAGTAATGAACGTTG 57.174 29.630 13.59 0.00 37.14 4.10
118 119 8.349983 GCTCTGTCTTCAAAGGTAAAATTACAA 58.650 33.333 5.74 0.00 35.37 2.41
119 120 7.719633 AGCTCTGTCTTCAAAGGTAAAATTACA 59.280 33.333 5.74 0.00 35.37 2.41
120 121 8.100508 AGCTCTGTCTTCAAAGGTAAAATTAC 57.899 34.615 0.00 0.00 0.00 1.89
121 122 9.216117 GTAGCTCTGTCTTCAAAGGTAAAATTA 57.784 33.333 0.00 0.00 28.44 1.40
122 123 7.939588 AGTAGCTCTGTCTTCAAAGGTAAAATT 59.060 33.333 0.00 0.00 28.44 1.82
123 124 7.454225 AGTAGCTCTGTCTTCAAAGGTAAAAT 58.546 34.615 0.00 0.00 28.44 1.82
124 125 6.827727 AGTAGCTCTGTCTTCAAAGGTAAAA 58.172 36.000 0.00 0.00 28.44 1.52
125 126 6.420913 AGTAGCTCTGTCTTCAAAGGTAAA 57.579 37.500 0.00 0.00 28.44 2.01
126 127 7.534723 TTAGTAGCTCTGTCTTCAAAGGTAA 57.465 36.000 0.00 0.00 28.44 2.85
127 128 7.719871 ATTAGTAGCTCTGTCTTCAAAGGTA 57.280 36.000 0.00 0.00 0.00 3.08
128 129 6.613153 ATTAGTAGCTCTGTCTTCAAAGGT 57.387 37.500 0.00 0.00 0.00 3.50
144 145 5.966636 TGTGCAAACATCGCTATTAGTAG 57.033 39.130 0.00 0.00 0.00 2.57
145 146 6.292114 CGAATGTGCAAACATCGCTATTAGTA 60.292 38.462 1.36 0.00 0.00 1.82
146 147 5.502382 CGAATGTGCAAACATCGCTATTAGT 60.502 40.000 1.36 0.00 0.00 2.24
147 148 4.900182 CGAATGTGCAAACATCGCTATTAG 59.100 41.667 1.36 0.00 0.00 1.73
148 149 4.331443 ACGAATGTGCAAACATCGCTATTA 59.669 37.500 12.53 0.00 0.00 0.98
149 150 3.126858 ACGAATGTGCAAACATCGCTATT 59.873 39.130 12.53 0.00 0.00 1.73
150 151 2.677836 ACGAATGTGCAAACATCGCTAT 59.322 40.909 12.53 0.00 0.00 2.97
151 152 2.073056 ACGAATGTGCAAACATCGCTA 58.927 42.857 12.53 0.00 0.00 4.26
152 153 0.874390 ACGAATGTGCAAACATCGCT 59.126 45.000 12.53 0.22 0.00 4.93
153 154 1.685302 AACGAATGTGCAAACATCGC 58.315 45.000 12.53 0.00 0.00 4.58
154 155 3.295785 TCAAACGAATGTGCAAACATCG 58.704 40.909 11.33 11.33 0.00 3.84
155 156 4.029418 CGATCAAACGAATGTGCAAACATC 59.971 41.667 0.00 0.00 35.09 3.06
156 157 3.913763 CGATCAAACGAATGTGCAAACAT 59.086 39.130 0.00 0.00 35.09 2.71
157 158 3.295785 CGATCAAACGAATGTGCAAACA 58.704 40.909 0.00 0.00 35.09 2.83
158 159 2.656422 CCGATCAAACGAATGTGCAAAC 59.344 45.455 0.00 0.00 35.09 2.93
159 160 2.351253 CCCGATCAAACGAATGTGCAAA 60.351 45.455 0.00 0.00 35.09 3.68
160 161 1.198867 CCCGATCAAACGAATGTGCAA 59.801 47.619 0.00 0.00 35.09 4.08
161 162 0.801872 CCCGATCAAACGAATGTGCA 59.198 50.000 0.00 0.00 35.09 4.57
162 163 0.098728 CCCCGATCAAACGAATGTGC 59.901 55.000 0.00 0.00 35.09 4.57
163 164 1.448985 ACCCCGATCAAACGAATGTG 58.551 50.000 0.00 0.00 35.09 3.21
164 165 2.498481 TCTACCCCGATCAAACGAATGT 59.502 45.455 0.00 0.00 35.09 2.71
165 166 2.864343 GTCTACCCCGATCAAACGAATG 59.136 50.000 0.00 0.00 35.09 2.67
166 167 2.498481 TGTCTACCCCGATCAAACGAAT 59.502 45.455 0.00 0.00 35.09 3.34
167 168 1.894466 TGTCTACCCCGATCAAACGAA 59.106 47.619 0.00 0.00 35.09 3.85
168 169 1.548081 TGTCTACCCCGATCAAACGA 58.452 50.000 0.00 0.00 35.09 3.85
169 170 2.373540 TTGTCTACCCCGATCAAACG 57.626 50.000 0.00 0.00 0.00 3.60
170 171 4.007659 ACAATTGTCTACCCCGATCAAAC 58.992 43.478 4.92 0.00 0.00 2.93
171 172 4.006989 CACAATTGTCTACCCCGATCAAA 58.993 43.478 8.48 0.00 0.00 2.69
172 173 3.605634 CACAATTGTCTACCCCGATCAA 58.394 45.455 8.48 0.00 0.00 2.57
173 174 2.093181 CCACAATTGTCTACCCCGATCA 60.093 50.000 8.48 0.00 0.00 2.92
174 175 2.093128 ACCACAATTGTCTACCCCGATC 60.093 50.000 8.48 0.00 0.00 3.69
175 176 1.913419 ACCACAATTGTCTACCCCGAT 59.087 47.619 8.48 0.00 0.00 4.18
176 177 1.354101 ACCACAATTGTCTACCCCGA 58.646 50.000 8.48 0.00 0.00 5.14
177 178 2.194201 AACCACAATTGTCTACCCCG 57.806 50.000 8.48 0.00 0.00 5.73
178 179 4.502431 CCAAAAACCACAATTGTCTACCCC 60.502 45.833 8.48 0.00 0.00 4.95
179 180 4.342665 TCCAAAAACCACAATTGTCTACCC 59.657 41.667 8.48 0.00 0.00 3.69
180 181 5.523438 TCCAAAAACCACAATTGTCTACC 57.477 39.130 8.48 0.00 0.00 3.18
181 182 5.751509 GGTTCCAAAAACCACAATTGTCTAC 59.248 40.000 8.48 0.00 40.03 2.59
182 183 5.163395 GGGTTCCAAAAACCACAATTGTCTA 60.163 40.000 8.48 0.00 42.33 2.59
183 184 4.383661 GGGTTCCAAAAACCACAATTGTCT 60.384 41.667 8.48 0.00 42.33 3.41
184 185 3.874543 GGGTTCCAAAAACCACAATTGTC 59.125 43.478 8.48 0.00 42.33 3.18
185 186 3.371059 GGGGTTCCAAAAACCACAATTGT 60.371 43.478 4.92 4.92 44.82 2.71
186 187 3.210227 GGGGTTCCAAAAACCACAATTG 58.790 45.455 3.24 3.24 44.82 2.32
187 188 3.569194 GGGGTTCCAAAAACCACAATT 57.431 42.857 9.04 0.00 44.82 2.32
191 192 2.043227 TCATGGGGTTCCAAAAACCAC 58.957 47.619 9.04 5.80 44.82 4.16
192 193 2.478872 TCATGGGGTTCCAAAAACCA 57.521 45.000 9.04 0.00 44.82 3.67
200 201 2.102578 CACAAAGGATCATGGGGTTCC 58.897 52.381 0.00 0.00 35.88 3.62
201 202 2.807676 ACACAAAGGATCATGGGGTTC 58.192 47.619 0.00 0.00 0.00 3.62
202 203 2.999185 ACACAAAGGATCATGGGGTT 57.001 45.000 0.00 0.00 0.00 4.11
203 204 3.117512 GGATACACAAAGGATCATGGGGT 60.118 47.826 0.00 0.00 0.00 4.95
204 205 3.490348 GGATACACAAAGGATCATGGGG 58.510 50.000 0.00 0.00 0.00 4.96
205 206 3.117550 TGGGATACACAAAGGATCATGGG 60.118 47.826 0.00 0.00 39.74 4.00
206 207 4.169059 TGGGATACACAAAGGATCATGG 57.831 45.455 0.00 0.00 39.74 3.66
231 232 9.632638 AGTTTAATATTGCTCATAGACCACATT 57.367 29.630 0.00 0.00 0.00 2.71
232 233 9.632638 AAGTTTAATATTGCTCATAGACCACAT 57.367 29.630 0.00 0.00 0.00 3.21
233 234 8.892723 CAAGTTTAATATTGCTCATAGACCACA 58.107 33.333 0.00 0.00 0.00 4.17
234 235 8.345565 CCAAGTTTAATATTGCTCATAGACCAC 58.654 37.037 0.00 0.00 0.00 4.16
235 236 8.052748 ACCAAGTTTAATATTGCTCATAGACCA 58.947 33.333 0.00 0.00 0.00 4.02
236 237 8.451908 ACCAAGTTTAATATTGCTCATAGACC 57.548 34.615 0.00 0.00 0.00 3.85
296 297 3.720002 TGGGAACAGAGGGAGTAGTTTTT 59.280 43.478 0.00 0.00 35.01 1.94
297 298 3.323775 TGGGAACAGAGGGAGTAGTTTT 58.676 45.455 0.00 0.00 35.01 2.43
298 299 2.986050 TGGGAACAGAGGGAGTAGTTT 58.014 47.619 0.00 0.00 35.01 2.66
299 300 2.715763 TGGGAACAGAGGGAGTAGTT 57.284 50.000 0.00 0.00 35.01 2.24
300 301 2.715763 TTGGGAACAGAGGGAGTAGT 57.284 50.000 0.00 0.00 44.54 2.73
301 302 5.896073 ATATTTGGGAACAGAGGGAGTAG 57.104 43.478 0.00 0.00 44.54 2.57
302 303 6.906901 ACTTATATTTGGGAACAGAGGGAGTA 59.093 38.462 0.00 0.00 44.54 2.59
303 304 5.731678 ACTTATATTTGGGAACAGAGGGAGT 59.268 40.000 0.00 0.00 44.54 3.85
304 305 6.100424 AGACTTATATTTGGGAACAGAGGGAG 59.900 42.308 0.00 0.00 44.54 4.30
305 306 5.970640 AGACTTATATTTGGGAACAGAGGGA 59.029 40.000 0.00 0.00 44.54 4.20
306 307 6.253946 AGACTTATATTTGGGAACAGAGGG 57.746 41.667 0.00 0.00 44.54 4.30
307 308 8.049721 AGAAAGACTTATATTTGGGAACAGAGG 58.950 37.037 0.00 0.00 44.54 3.69
322 323 9.883142 CTTGTTGGAATCTCTAGAAAGACTTAT 57.117 33.333 0.00 0.00 0.00 1.73
323 324 8.871125 ACTTGTTGGAATCTCTAGAAAGACTTA 58.129 33.333 0.00 0.00 0.00 2.24
324 325 7.659390 CACTTGTTGGAATCTCTAGAAAGACTT 59.341 37.037 0.00 0.00 0.00 3.01
325 326 7.015682 TCACTTGTTGGAATCTCTAGAAAGACT 59.984 37.037 0.00 0.00 0.00 3.24
326 327 7.117092 GTCACTTGTTGGAATCTCTAGAAAGAC 59.883 40.741 0.00 0.00 0.00 3.01
327 328 7.015682 AGTCACTTGTTGGAATCTCTAGAAAGA 59.984 37.037 0.00 0.00 0.00 2.52
328 329 7.158021 AGTCACTTGTTGGAATCTCTAGAAAG 58.842 38.462 0.00 0.00 0.00 2.62
329 330 7.067496 AGTCACTTGTTGGAATCTCTAGAAA 57.933 36.000 0.00 0.00 0.00 2.52
330 331 6.672266 AGTCACTTGTTGGAATCTCTAGAA 57.328 37.500 0.00 0.00 0.00 2.10
331 332 6.719829 TGTAGTCACTTGTTGGAATCTCTAGA 59.280 38.462 0.00 0.00 0.00 2.43
332 333 6.925211 TGTAGTCACTTGTTGGAATCTCTAG 58.075 40.000 0.00 0.00 0.00 2.43
333 334 6.911250 TGTAGTCACTTGTTGGAATCTCTA 57.089 37.500 0.00 0.00 0.00 2.43
334 335 5.808366 TGTAGTCACTTGTTGGAATCTCT 57.192 39.130 0.00 0.00 0.00 3.10
335 336 6.253727 CGTATGTAGTCACTTGTTGGAATCTC 59.746 42.308 0.00 0.00 0.00 2.75
336 337 6.100004 CGTATGTAGTCACTTGTTGGAATCT 58.900 40.000 0.00 0.00 0.00 2.40
337 338 5.291128 CCGTATGTAGTCACTTGTTGGAATC 59.709 44.000 0.00 0.00 0.00 2.52
338 339 5.046878 TCCGTATGTAGTCACTTGTTGGAAT 60.047 40.000 0.00 0.00 0.00 3.01
339 340 4.281435 TCCGTATGTAGTCACTTGTTGGAA 59.719 41.667 0.00 0.00 0.00 3.53
340 341 3.827876 TCCGTATGTAGTCACTTGTTGGA 59.172 43.478 0.00 0.00 0.00 3.53
341 342 4.174009 CTCCGTATGTAGTCACTTGTTGG 58.826 47.826 0.00 0.00 0.00 3.77
342 343 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
343 344 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
344 345 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
345 346 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
346 347 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
347 348 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
348 349 6.897259 TTATTTTGCTCCGTATGTAGTCAC 57.103 37.500 0.00 0.00 0.00 3.67
349 350 7.766738 TCATTTATTTTGCTCCGTATGTAGTCA 59.233 33.333 0.00 0.00 0.00 3.41
350 351 8.138365 TCATTTATTTTGCTCCGTATGTAGTC 57.862 34.615 0.00 0.00 0.00 2.59
351 352 8.500753 TTCATTTATTTTGCTCCGTATGTAGT 57.499 30.769 0.00 0.00 0.00 2.73
352 353 9.599322 GATTCATTTATTTTGCTCCGTATGTAG 57.401 33.333 0.00 0.00 0.00 2.74
353 354 9.337396 AGATTCATTTATTTTGCTCCGTATGTA 57.663 29.630 0.00 0.00 0.00 2.29
354 355 8.225603 AGATTCATTTATTTTGCTCCGTATGT 57.774 30.769 0.00 0.00 0.00 2.29
355 356 9.599322 GTAGATTCATTTATTTTGCTCCGTATG 57.401 33.333 0.00 0.00 0.00 2.39
356 357 9.337396 TGTAGATTCATTTATTTTGCTCCGTAT 57.663 29.630 0.00 0.00 0.00 3.06
357 358 8.609176 GTGTAGATTCATTTATTTTGCTCCGTA 58.391 33.333 0.00 0.00 0.00 4.02
358 359 7.336931 AGTGTAGATTCATTTATTTTGCTCCGT 59.663 33.333 0.00 0.00 0.00 4.69
359 360 7.697691 AGTGTAGATTCATTTATTTTGCTCCG 58.302 34.615 0.00 0.00 0.00 4.63
360 361 8.897752 AGAGTGTAGATTCATTTATTTTGCTCC 58.102 33.333 0.00 0.00 0.00 4.70
401 402 9.384764 TCAAATGAAATACAACATACGGATGTA 57.615 29.630 15.10 0.00 45.93 2.29
403 404 9.566530 TTTCAAATGAAATACAACATACGGATG 57.433 29.630 5.94 5.94 38.94 3.51
436 437 9.868160 CCCTCCATTCCTAAATATAAGTCTTTT 57.132 33.333 0.00 0.00 0.00 2.27
437 438 9.237706 TCCCTCCATTCCTAAATATAAGTCTTT 57.762 33.333 0.00 0.00 0.00 2.52
438 439 8.814448 TCCCTCCATTCCTAAATATAAGTCTT 57.186 34.615 0.00 0.00 0.00 3.01
439 440 8.019652 ACTCCCTCCATTCCTAAATATAAGTCT 58.980 37.037 0.00 0.00 0.00 3.24
440 441 8.208575 ACTCCCTCCATTCCTAAATATAAGTC 57.791 38.462 0.00 0.00 0.00 3.01
441 442 9.684702 TTACTCCCTCCATTCCTAAATATAAGT 57.315 33.333 0.00 0.00 0.00 2.24
446 447 8.603304 GCTTATTACTCCCTCCATTCCTAAATA 58.397 37.037 0.00 0.00 0.00 1.40
447 448 7.295911 AGCTTATTACTCCCTCCATTCCTAAAT 59.704 37.037 0.00 0.00 0.00 1.40
448 449 6.619852 AGCTTATTACTCCCTCCATTCCTAAA 59.380 38.462 0.00 0.00 0.00 1.85
449 450 6.151049 AGCTTATTACTCCCTCCATTCCTAA 58.849 40.000 0.00 0.00 0.00 2.69
450 451 5.727630 AGCTTATTACTCCCTCCATTCCTA 58.272 41.667 0.00 0.00 0.00 2.94
451 452 4.571951 AGCTTATTACTCCCTCCATTCCT 58.428 43.478 0.00 0.00 0.00 3.36
452 453 4.984146 AGCTTATTACTCCCTCCATTCC 57.016 45.455 0.00 0.00 0.00 3.01
453 454 5.765677 GGAAAGCTTATTACTCCCTCCATTC 59.234 44.000 0.00 0.00 0.00 2.67
454 455 5.687706 CGGAAAGCTTATTACTCCCTCCATT 60.688 44.000 0.00 0.00 0.00 3.16
455 456 4.202367 CGGAAAGCTTATTACTCCCTCCAT 60.202 45.833 0.00 0.00 0.00 3.41
456 457 3.134081 CGGAAAGCTTATTACTCCCTCCA 59.866 47.826 0.00 0.00 0.00 3.86
457 458 3.387050 TCGGAAAGCTTATTACTCCCTCC 59.613 47.826 0.00 0.00 0.00 4.30
458 459 4.370049 GTCGGAAAGCTTATTACTCCCTC 58.630 47.826 0.00 0.00 0.00 4.30
459 460 3.181478 CGTCGGAAAGCTTATTACTCCCT 60.181 47.826 0.00 0.00 0.00 4.20
460 461 3.121544 CGTCGGAAAGCTTATTACTCCC 58.878 50.000 0.00 0.00 0.00 4.30
461 462 4.037858 TCGTCGGAAAGCTTATTACTCC 57.962 45.455 0.00 1.07 0.00 3.85
462 463 5.279384 TCATCGTCGGAAAGCTTATTACTC 58.721 41.667 0.00 0.00 0.00 2.59
463 464 5.258456 TCATCGTCGGAAAGCTTATTACT 57.742 39.130 0.00 0.00 0.00 2.24
464 465 4.444720 CCTCATCGTCGGAAAGCTTATTAC 59.555 45.833 0.00 0.00 0.00 1.89
465 466 4.340097 TCCTCATCGTCGGAAAGCTTATTA 59.660 41.667 0.00 0.00 0.00 0.98
466 467 3.132289 TCCTCATCGTCGGAAAGCTTATT 59.868 43.478 0.00 0.00 0.00 1.40
467 468 2.693591 TCCTCATCGTCGGAAAGCTTAT 59.306 45.455 0.00 0.00 0.00 1.73
468 469 2.097036 TCCTCATCGTCGGAAAGCTTA 58.903 47.619 0.00 0.00 0.00 3.09
469 470 0.895530 TCCTCATCGTCGGAAAGCTT 59.104 50.000 0.00 0.00 0.00 3.74
470 471 1.067821 GATCCTCATCGTCGGAAAGCT 59.932 52.381 0.00 0.00 32.12 3.74
471 472 1.202417 TGATCCTCATCGTCGGAAAGC 60.202 52.381 0.00 0.00 32.12 3.51
472 473 2.736978 CTGATCCTCATCGTCGGAAAG 58.263 52.381 0.00 0.00 32.12 2.62
473 474 1.202417 GCTGATCCTCATCGTCGGAAA 60.202 52.381 0.00 0.00 32.12 3.13
562 568 7.309012 GGGGGATTTTTAAGATCGTAAATAGCC 60.309 40.741 21.62 21.62 32.76 3.93
589 595 0.930726 TGGTCTGGGTGAGGGTTTTT 59.069 50.000 0.00 0.00 0.00 1.94
783 855 1.443872 CGTCGGGGAGTTGTTCTCG 60.444 63.158 0.00 0.00 43.60 4.04
873 945 1.554392 CGTTTGCGAGGAGAGATGAG 58.446 55.000 0.00 0.00 41.33 2.90
1160 1232 0.752743 CGTACCCCCGTACATGGAGA 60.753 60.000 0.00 0.00 44.41 3.71
1161 1233 0.752743 TCGTACCCCCGTACATGGAG 60.753 60.000 0.00 0.00 44.41 3.86
2083 8214 0.951040 GCCTGGAAGTCGGTGTTCAG 60.951 60.000 0.00 0.00 0.00 3.02
2567 8725 0.684153 AAGTTGGCCGCCTGCAATAT 60.684 50.000 11.61 0.00 43.89 1.28
2568 8726 0.897863 AAAGTTGGCCGCCTGCAATA 60.898 50.000 11.61 0.00 43.89 1.90
2569 8727 2.209315 AAAGTTGGCCGCCTGCAAT 61.209 52.632 11.61 0.00 43.89 3.56
2570 8728 2.837291 AAAGTTGGCCGCCTGCAA 60.837 55.556 11.61 0.00 43.89 4.08
2571 8729 3.604667 CAAAGTTGGCCGCCTGCA 61.605 61.111 11.61 0.00 43.89 4.41
2574 8732 0.328258 ATAGACAAAGTTGGCCGCCT 59.672 50.000 11.61 0.00 36.67 5.52
2576 8734 2.629051 ACTATAGACAAAGTTGGCCGC 58.371 47.619 6.78 0.00 36.67 6.53
2577 8735 6.103997 TCTAAACTATAGACAAAGTTGGCCG 58.896 40.000 6.78 0.00 36.67 6.13
2578 8736 6.037281 GCTCTAAACTATAGACAAAGTTGGCC 59.963 42.308 6.78 0.00 36.67 5.36
2579 8737 6.819146 AGCTCTAAACTATAGACAAAGTTGGC 59.181 38.462 6.78 0.00 36.12 4.52
2580 8738 7.819900 ACAGCTCTAAACTATAGACAAAGTTGG 59.180 37.037 6.78 0.00 36.12 3.77
2586 8745 7.342026 TCATGGACAGCTCTAAACTATAGACAA 59.658 37.037 6.78 0.00 0.00 3.18
2669 8832 5.363979 AAAAAGAACGCTCATCTTCCTTC 57.636 39.130 0.00 0.00 36.14 3.46
2727 8892 9.367444 CAAGTAATAATCTCGGTACTCTTTTGT 57.633 33.333 0.00 0.00 0.00 2.83
2739 8906 7.667557 TGGGTTCCTATCAAGTAATAATCTCG 58.332 38.462 0.00 0.00 0.00 4.04
2749 8916 5.476945 GTCATGTTTTGGGTTCCTATCAAGT 59.523 40.000 0.00 0.00 0.00 3.16
2750 8917 5.476599 TGTCATGTTTTGGGTTCCTATCAAG 59.523 40.000 0.00 0.00 0.00 3.02
2751 8918 5.389520 TGTCATGTTTTGGGTTCCTATCAA 58.610 37.500 0.00 0.00 0.00 2.57
2753 8920 5.975693 TTGTCATGTTTTGGGTTCCTATC 57.024 39.130 0.00 0.00 0.00 2.08
2769 8939 6.845758 ATGTCACCTCATCAAAATTGTCAT 57.154 33.333 0.00 0.00 0.00 3.06
2925 9102 4.344102 TCTTGTATAACGGAATGGAGGGAG 59.656 45.833 0.00 0.00 0.00 4.30
2926 9103 4.291792 TCTTGTATAACGGAATGGAGGGA 58.708 43.478 0.00 0.00 0.00 4.20
2927 9104 4.682778 TCTTGTATAACGGAATGGAGGG 57.317 45.455 0.00 0.00 0.00 4.30
2928 9105 5.611374 ACATCTTGTATAACGGAATGGAGG 58.389 41.667 0.00 0.00 0.00 4.30
2929 9106 8.833231 AATACATCTTGTATAACGGAATGGAG 57.167 34.615 0.86 0.00 42.29 3.86
2930 9107 9.051679 CAAATACATCTTGTATAACGGAATGGA 57.948 33.333 0.86 0.00 42.29 3.41
2931 9108 8.836413 ACAAATACATCTTGTATAACGGAATGG 58.164 33.333 0.86 0.00 42.29 3.16
2943 9120 9.665719 ACTTTTGGAAAAACAAATACATCTTGT 57.334 25.926 0.00 0.00 39.80 3.16
2945 9122 9.883142 TGACTTTTGGAAAAACAAATACATCTT 57.117 25.926 0.00 0.00 39.80 2.40
2946 9123 9.883142 TTGACTTTTGGAAAAACAAATACATCT 57.117 25.926 0.00 0.00 39.80 2.90
2949 9126 8.436200 CGTTTGACTTTTGGAAAAACAAATACA 58.564 29.630 14.28 0.00 39.80 2.29
2950 9127 8.648968 TCGTTTGACTTTTGGAAAAACAAATAC 58.351 29.630 14.28 7.48 39.80 1.89
2951 9128 8.758633 TCGTTTGACTTTTGGAAAAACAAATA 57.241 26.923 14.28 7.97 39.80 1.40
2952 9129 7.386573 ACTCGTTTGACTTTTGGAAAAACAAAT 59.613 29.630 14.28 3.44 39.80 2.32
2953 9130 6.702282 ACTCGTTTGACTTTTGGAAAAACAAA 59.298 30.769 10.27 10.27 38.48 2.83
2954 9131 6.144724 CACTCGTTTGACTTTTGGAAAAACAA 59.855 34.615 0.00 0.00 31.69 2.83
2955 9132 5.631512 CACTCGTTTGACTTTTGGAAAAACA 59.368 36.000 0.00 0.00 31.69 2.83
2956 9133 5.444087 GCACTCGTTTGACTTTTGGAAAAAC 60.444 40.000 0.00 0.00 0.00 2.43
2957 9134 4.623595 GCACTCGTTTGACTTTTGGAAAAA 59.376 37.500 0.00 0.00 0.00 1.94
2958 9135 4.170256 GCACTCGTTTGACTTTTGGAAAA 58.830 39.130 0.00 0.00 0.00 2.29
2959 9136 3.191581 TGCACTCGTTTGACTTTTGGAAA 59.808 39.130 0.00 0.00 0.00 3.13
2960 9137 2.750166 TGCACTCGTTTGACTTTTGGAA 59.250 40.909 0.00 0.00 0.00 3.53
2961 9138 2.360844 TGCACTCGTTTGACTTTTGGA 58.639 42.857 0.00 0.00 0.00 3.53
2962 9139 2.842208 TGCACTCGTTTGACTTTTGG 57.158 45.000 0.00 0.00 0.00 3.28
2963 9140 3.694734 ACATGCACTCGTTTGACTTTTG 58.305 40.909 0.00 0.00 0.00 2.44
2964 9141 4.370364 AACATGCACTCGTTTGACTTTT 57.630 36.364 0.00 0.00 0.00 2.27
2965 9142 4.370364 AAACATGCACTCGTTTGACTTT 57.630 36.364 9.29 0.00 34.16 2.66
2971 9148 2.942376 TCAGTCAAACATGCACTCGTTT 59.058 40.909 5.20 5.20 35.76 3.60
2972 9149 2.545526 CTCAGTCAAACATGCACTCGTT 59.454 45.455 0.00 0.00 0.00 3.85
2973 9150 2.138320 CTCAGTCAAACATGCACTCGT 58.862 47.619 0.00 0.00 0.00 4.18
2974 9151 2.138320 ACTCAGTCAAACATGCACTCG 58.862 47.619 0.00 0.00 0.00 4.18
2975 9152 4.558538 AAACTCAGTCAAACATGCACTC 57.441 40.909 0.00 0.00 0.00 3.51
2976 9153 4.989279 AAAACTCAGTCAAACATGCACT 57.011 36.364 0.00 0.00 0.00 4.40
2977 9154 6.494842 TCTAAAAACTCAGTCAAACATGCAC 58.505 36.000 0.00 0.00 0.00 4.57
2978 9155 6.691754 TCTAAAAACTCAGTCAAACATGCA 57.308 33.333 0.00 0.00 0.00 3.96
2979 9156 7.985634 TTTCTAAAAACTCAGTCAAACATGC 57.014 32.000 0.00 0.00 0.00 4.06
3007 9184 9.658799 CTTCCTTCGTATTGTGGATATTGATAT 57.341 33.333 0.00 0.00 0.00 1.63
3008 9185 8.866093 TCTTCCTTCGTATTGTGGATATTGATA 58.134 33.333 0.00 0.00 0.00 2.15
3009 9186 7.735917 TCTTCCTTCGTATTGTGGATATTGAT 58.264 34.615 0.00 0.00 0.00 2.57
3010 9187 7.119709 TCTTCCTTCGTATTGTGGATATTGA 57.880 36.000 0.00 0.00 0.00 2.57
3011 9188 6.073548 GCTCTTCCTTCGTATTGTGGATATTG 60.074 42.308 0.00 0.00 0.00 1.90
3012 9189 5.992217 GCTCTTCCTTCGTATTGTGGATATT 59.008 40.000 0.00 0.00 0.00 1.28
3013 9190 5.542779 GCTCTTCCTTCGTATTGTGGATAT 58.457 41.667 0.00 0.00 0.00 1.63
3014 9191 4.499188 CGCTCTTCCTTCGTATTGTGGATA 60.499 45.833 0.00 0.00 0.00 2.59
3015 9192 3.738281 CGCTCTTCCTTCGTATTGTGGAT 60.738 47.826 0.00 0.00 0.00 3.41
3016 9193 2.416836 CGCTCTTCCTTCGTATTGTGGA 60.417 50.000 0.00 0.00 0.00 4.02
3017 9194 1.927174 CGCTCTTCCTTCGTATTGTGG 59.073 52.381 0.00 0.00 0.00 4.17
3018 9195 2.345641 CACGCTCTTCCTTCGTATTGTG 59.654 50.000 0.00 0.00 34.81 3.33
3019 9196 2.029290 ACACGCTCTTCCTTCGTATTGT 60.029 45.455 0.00 0.00 34.81 2.71
3020 9197 2.345641 CACACGCTCTTCCTTCGTATTG 59.654 50.000 0.00 0.00 34.81 1.90
3021 9198 2.029290 ACACACGCTCTTCCTTCGTATT 60.029 45.455 0.00 0.00 34.81 1.89
3022 9199 1.544691 ACACACGCTCTTCCTTCGTAT 59.455 47.619 0.00 0.00 34.81 3.06
3023 9200 0.956633 ACACACGCTCTTCCTTCGTA 59.043 50.000 0.00 0.00 34.81 3.43
3024 9201 0.104304 AACACACGCTCTTCCTTCGT 59.896 50.000 0.00 0.00 36.84 3.85
3025 9202 0.784778 GAACACACGCTCTTCCTTCG 59.215 55.000 0.00 0.00 0.00 3.79
3026 9203 2.156343 AGAACACACGCTCTTCCTTC 57.844 50.000 0.00 0.00 0.00 3.46
3027 9204 2.622064 AAGAACACACGCTCTTCCTT 57.378 45.000 0.00 0.00 0.00 3.36
3028 9205 2.622064 AAAGAACACACGCTCTTCCT 57.378 45.000 0.00 0.00 30.57 3.36
3029 9206 3.692791 AAAAAGAACACACGCTCTTCC 57.307 42.857 0.00 0.00 30.57 3.46
3072 9249 9.303116 TGTACTCTTTTTGGCAAATTTCCTATA 57.697 29.630 14.29 0.00 0.00 1.31
3073 9250 8.189119 TGTACTCTTTTTGGCAAATTTCCTAT 57.811 30.769 14.29 0.00 0.00 2.57
3074 9251 7.504238 TCTGTACTCTTTTTGGCAAATTTCCTA 59.496 33.333 14.29 0.00 0.00 2.94
3075 9252 6.323739 TCTGTACTCTTTTTGGCAAATTTCCT 59.676 34.615 14.29 0.00 0.00 3.36
3076 9253 6.512297 TCTGTACTCTTTTTGGCAAATTTCC 58.488 36.000 14.29 0.00 0.00 3.13
3077 9254 9.860898 ATATCTGTACTCTTTTTGGCAAATTTC 57.139 29.630 14.29 1.92 0.00 2.17
3119 9296 6.042143 CCTCATCAAAATTATCCCGTTTTGG 58.958 40.000 9.77 0.00 42.58 3.28
3120 9297 6.531240 CACCTCATCAAAATTATCCCGTTTTG 59.469 38.462 4.64 4.64 43.29 2.44
3121 9298 6.350949 CCACCTCATCAAAATTATCCCGTTTT 60.351 38.462 0.00 0.00 0.00 2.43
3122 9299 5.127031 CCACCTCATCAAAATTATCCCGTTT 59.873 40.000 0.00 0.00 0.00 3.60
3123 9300 4.644685 CCACCTCATCAAAATTATCCCGTT 59.355 41.667 0.00 0.00 0.00 4.44
3124 9301 4.207165 CCACCTCATCAAAATTATCCCGT 58.793 43.478 0.00 0.00 0.00 5.28
3125 9302 3.004734 GCCACCTCATCAAAATTATCCCG 59.995 47.826 0.00 0.00 0.00 5.14
3126 9303 3.960102 TGCCACCTCATCAAAATTATCCC 59.040 43.478 0.00 0.00 0.00 3.85
3127 9304 5.796424 ATGCCACCTCATCAAAATTATCC 57.204 39.130 0.00 0.00 0.00 2.59
3128 9305 7.750229 TCTATGCCACCTCATCAAAATTATC 57.250 36.000 0.00 0.00 0.00 1.75
3129 9306 8.716674 ATTCTATGCCACCTCATCAAAATTAT 57.283 30.769 0.00 0.00 0.00 1.28
3130 9307 8.537728 AATTCTATGCCACCTCATCAAAATTA 57.462 30.769 0.00 0.00 0.00 1.40
3131 9308 7.427989 AATTCTATGCCACCTCATCAAAATT 57.572 32.000 0.00 0.00 0.00 1.82
3132 9309 8.537728 TTAATTCTATGCCACCTCATCAAAAT 57.462 30.769 0.00 0.00 0.00 1.82
3133 9310 7.615365 ACTTAATTCTATGCCACCTCATCAAAA 59.385 33.333 0.00 0.00 0.00 2.44
3134 9311 7.118723 ACTTAATTCTATGCCACCTCATCAAA 58.881 34.615 0.00 0.00 0.00 2.69
3135 9312 6.662755 ACTTAATTCTATGCCACCTCATCAA 58.337 36.000 0.00 0.00 0.00 2.57
3136 9313 6.252599 ACTTAATTCTATGCCACCTCATCA 57.747 37.500 0.00 0.00 0.00 3.07
3137 9314 7.671302 TCTACTTAATTCTATGCCACCTCATC 58.329 38.462 0.00 0.00 0.00 2.92
3138 9315 7.510685 TCTCTACTTAATTCTATGCCACCTCAT 59.489 37.037 0.00 0.00 0.00 2.90
3139 9316 6.839134 TCTCTACTTAATTCTATGCCACCTCA 59.161 38.462 0.00 0.00 0.00 3.86
3140 9317 7.291411 TCTCTACTTAATTCTATGCCACCTC 57.709 40.000 0.00 0.00 0.00 3.85
3141 9318 7.676683 TTCTCTACTTAATTCTATGCCACCT 57.323 36.000 0.00 0.00 0.00 4.00
3142 9319 8.204836 TCTTTCTCTACTTAATTCTATGCCACC 58.795 37.037 0.00 0.00 0.00 4.61
3143 9320 9.255304 CTCTTTCTCTACTTAATTCTATGCCAC 57.745 37.037 0.00 0.00 0.00 5.01
3144 9321 9.201989 TCTCTTTCTCTACTTAATTCTATGCCA 57.798 33.333 0.00 0.00 0.00 4.92
3208 9385 9.243105 TCATGCAAGACATATAGTACTATAGCA 57.757 33.333 23.55 23.55 36.64 3.49
3209 9386 9.509855 GTCATGCAAGACATATAGTACTATAGC 57.490 37.037 23.42 19.82 36.64 2.97
3212 9389 9.698309 GTTGTCATGCAAGACATATAGTACTAT 57.302 33.333 24.00 19.07 46.90 2.12
3213 9390 8.691797 TGTTGTCATGCAAGACATATAGTACTA 58.308 33.333 24.00 4.77 46.90 1.82
3214 9391 7.555965 TGTTGTCATGCAAGACATATAGTACT 58.444 34.615 24.00 0.00 46.90 2.73
3215 9392 7.770801 TGTTGTCATGCAAGACATATAGTAC 57.229 36.000 24.00 17.78 46.90 2.73
3216 9393 8.785329 TTTGTTGTCATGCAAGACATATAGTA 57.215 30.769 24.00 6.69 46.90 1.82
3217 9394 7.686438 TTTGTTGTCATGCAAGACATATAGT 57.314 32.000 24.00 0.00 46.90 2.12
3220 9397 8.192774 CCTTATTTGTTGTCATGCAAGACATAT 58.807 33.333 24.00 16.48 46.90 1.78
3221 9398 7.176515 ACCTTATTTGTTGTCATGCAAGACATA 59.823 33.333 24.00 14.12 46.90 2.29
3222 9399 6.015180 ACCTTATTTGTTGTCATGCAAGACAT 60.015 34.615 24.00 12.20 46.90 3.06
3223 9400 5.301551 ACCTTATTTGTTGTCATGCAAGACA 59.698 36.000 20.17 20.17 46.12 3.41
3224 9401 5.772521 ACCTTATTTGTTGTCATGCAAGAC 58.227 37.500 15.01 15.01 37.83 3.01
3225 9402 5.534278 TGACCTTATTTGTTGTCATGCAAGA 59.466 36.000 0.00 0.00 37.83 3.02
3226 9403 5.771469 TGACCTTATTTGTTGTCATGCAAG 58.229 37.500 0.00 0.00 37.83 4.01
3227 9404 5.781210 TGACCTTATTTGTTGTCATGCAA 57.219 34.783 0.00 0.00 33.09 4.08
3228 9405 5.981088 ATGACCTTATTTGTTGTCATGCA 57.019 34.783 3.40 0.00 44.43 3.96
3231 9408 8.862325 TCTTACATGACCTTATTTGTTGTCAT 57.138 30.769 0.00 0.00 46.41 3.06
3232 9409 8.862325 ATCTTACATGACCTTATTTGTTGTCA 57.138 30.769 0.00 0.00 41.52 3.58
3234 9411 9.959721 AGTATCTTACATGACCTTATTTGTTGT 57.040 29.630 0.00 0.00 0.00 3.32
3243 9420 9.159254 TCCAATATCAGTATCTTACATGACCTT 57.841 33.333 0.00 0.00 0.00 3.50
3244 9421 8.727100 TCCAATATCAGTATCTTACATGACCT 57.273 34.615 0.00 0.00 0.00 3.85
3262 9439 9.710818 ACCTCGGTAATACATAGTATCCAATAT 57.289 33.333 0.00 0.00 0.00 1.28
3264 9441 9.186837 CTACCTCGGTAATACATAGTATCCAAT 57.813 37.037 0.00 0.00 0.00 3.16
3265 9442 8.166061 ACTACCTCGGTAATACATAGTATCCAA 58.834 37.037 0.00 0.00 0.00 3.53
3266 9443 7.693132 ACTACCTCGGTAATACATAGTATCCA 58.307 38.462 0.00 0.00 0.00 3.41
3267 9444 9.103861 GTACTACCTCGGTAATACATAGTATCC 57.896 40.741 9.23 0.00 34.59 2.59
3268 9445 9.103861 GGTACTACCTCGGTAATACATAGTATC 57.896 40.741 14.46 3.21 35.69 2.24
3269 9446 8.605947 TGGTACTACCTCGGTAATACATAGTAT 58.394 37.037 14.46 0.00 39.58 2.12
3270 9447 7.973402 TGGTACTACCTCGGTAATACATAGTA 58.027 38.462 14.46 3.58 39.58 1.82
3271 9448 6.841601 TGGTACTACCTCGGTAATACATAGT 58.158 40.000 14.46 4.41 39.58 2.12
3272 9449 7.934855 ATGGTACTACCTCGGTAATACATAG 57.065 40.000 14.46 0.00 39.58 2.23
3330 9508 5.605534 AGATTAGTTATGCTGCTGTAGTGG 58.394 41.667 0.00 0.00 0.00 4.00
3334 9512 7.786030 AGAAGAAGATTAGTTATGCTGCTGTA 58.214 34.615 0.00 0.00 0.00 2.74
3336 9514 7.551035 AAGAAGAAGATTAGTTATGCTGCTG 57.449 36.000 0.00 0.00 0.00 4.41
3339 9517 9.255304 GGTCTAAGAAGAAGATTAGTTATGCTG 57.745 37.037 0.00 0.00 32.16 4.41
3340 9518 9.207868 AGGTCTAAGAAGAAGATTAGTTATGCT 57.792 33.333 0.00 0.00 32.16 3.79
3341 9519 9.825109 AAGGTCTAAGAAGAAGATTAGTTATGC 57.175 33.333 0.00 0.00 32.16 3.14
3372 9551 7.995488 AGATGAATAGATTGGGAAATTTCTCGT 59.005 33.333 17.42 6.80 0.00 4.18
3383 9562 6.433404 CCAGGATTGAAGATGAATAGATTGGG 59.567 42.308 0.00 0.00 0.00 4.12
3384 9563 6.072064 GCCAGGATTGAAGATGAATAGATTGG 60.072 42.308 0.00 0.00 0.00 3.16
3385 9564 6.489022 TGCCAGGATTGAAGATGAATAGATTG 59.511 38.462 0.00 0.00 0.00 2.67
3405 9584 3.876914 TCTGTTGTTCTTTGTACTGCCAG 59.123 43.478 0.00 0.00 0.00 4.85
3408 9587 3.877508 ACCTCTGTTGTTCTTTGTACTGC 59.122 43.478 0.00 0.00 0.00 4.40
3451 9630 1.144057 GTCGCTAGGTGGTCCATGG 59.856 63.158 4.97 4.97 35.89 3.66
3464 9643 4.554163 GTGCTTGTACTCGTCGCT 57.446 55.556 0.00 0.00 0.00 4.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.