Multiple sequence alignment - TraesCS7D01G489200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G489200 chr7D 100.000 4087 0 0 1 4087 598729941 598725855 0.000000e+00 7548.0
1 TraesCS7D01G489200 chr7D 88.809 697 52 10 1 672 544554875 544554180 0.000000e+00 832.0
2 TraesCS7D01G489200 chr7D 98.047 256 5 0 2974 3229 571977631 571977886 2.900000e-121 446.0
3 TraesCS7D01G489200 chr7D 96.109 257 10 0 2974 3230 45518719 45518463 1.760000e-113 420.0
4 TraesCS7D01G489200 chr7D 95.349 258 12 0 2972 3229 11727021 11726764 1.060000e-110 411.0
5 TraesCS7D01G489200 chr7D 81.769 373 35 18 1012 1369 599074747 599074393 8.650000e-72 281.0
6 TraesCS7D01G489200 chr7D 91.228 57 5 0 658 714 296480636 296480580 1.220000e-10 78.7
7 TraesCS7D01G489200 chr7A 93.186 1086 39 9 783 1843 691276305 691275230 0.000000e+00 1563.0
8 TraesCS7D01G489200 chr7A 91.379 464 35 4 2394 2854 691289616 691289155 7.460000e-177 630.0
9 TraesCS7D01G489200 chr7A 89.562 479 34 8 2394 2856 691275233 691274755 9.780000e-166 593.0
10 TraesCS7D01G489200 chr7A 87.368 380 45 3 1465 1843 691289990 691289613 2.260000e-117 433.0
11 TraesCS7D01G489200 chr7A 83.000 400 35 24 993 1379 691290363 691289984 8.470000e-87 331.0
12 TraesCS7D01G489200 chr7A 88.755 249 18 9 3845 4087 691273937 691273693 3.090000e-76 296.0
13 TraesCS7D01G489200 chr7A 88.353 249 19 8 3845 4087 691287534 691287290 1.440000e-74 291.0
14 TraesCS7D01G489200 chr7A 95.714 70 3 0 710 779 598328921 598328852 3.340000e-21 113.0
15 TraesCS7D01G489200 chr5D 95.646 712 28 1 1 712 35486042 35486750 0.000000e+00 1140.0
16 TraesCS7D01G489200 chr5D 93.933 478 19 3 3610 4087 446097130 446097597 0.000000e+00 713.0
17 TraesCS7D01G489200 chr5D 95.430 372 15 2 1 371 539781104 539781474 3.520000e-165 592.0
18 TraesCS7D01G489200 chr5D 97.368 266 7 0 446 711 539781485 539781750 1.730000e-123 453.0
19 TraesCS7D01G489200 chr5D 96.094 256 10 0 2974 3229 454842033 454842288 6.320000e-113 418.0
20 TraesCS7D01G489200 chr5D 95.038 262 13 0 2973 3234 7038335 7038596 2.940000e-111 412.0
21 TraesCS7D01G489200 chr5D 84.635 397 53 4 2403 2799 445885598 445885986 4.950000e-104 388.0
22 TraesCS7D01G489200 chr5D 84.136 353 54 2 1462 1813 445885204 445885555 1.410000e-89 340.0
23 TraesCS7D01G489200 chr5D 94.764 191 10 0 3305 3495 446096893 446097083 8.590000e-77 298.0
24 TraesCS7D01G489200 chr5D 96.154 182 7 0 2137 2318 549503017 549503198 8.590000e-77 298.0
25 TraesCS7D01G489200 chr5D 81.818 385 35 20 1012 1379 445884847 445885213 1.440000e-74 291.0
26 TraesCS7D01G489200 chr7B 94.266 715 37 2 1 711 82145310 82144596 0.000000e+00 1090.0
27 TraesCS7D01G489200 chr7B 93.548 434 25 2 1961 2394 648784780 648784350 0.000000e+00 643.0
28 TraesCS7D01G489200 chr7B 92.368 380 15 2 1466 1843 678342272 678341905 2.800000e-146 529.0
29 TraesCS7D01G489200 chr7B 87.119 427 31 12 1027 1438 678342916 678342499 2.880000e-126 462.0
30 TraesCS7D01G489200 chr7B 91.176 306 25 1 2088 2393 648785977 648785674 8.170000e-112 414.0
31 TraesCS7D01G489200 chr7B 94.545 220 12 0 2394 2613 678341908 678341689 1.410000e-89 340.0
32 TraesCS7D01G489200 chr7B 83.436 326 46 5 2482 2807 678568179 678567862 3.090000e-76 296.0
33 TraesCS7D01G489200 chr7B 81.429 350 63 2 1465 1813 678568830 678568482 6.690000e-73 285.0
34 TraesCS7D01G489200 chr7B 90.647 139 11 2 1243 1379 678568962 678568824 2.510000e-42 183.0
35 TraesCS7D01G489200 chr7B 85.246 122 18 0 2852 2973 678340479 678340358 4.290000e-25 126.0
36 TraesCS7D01G489200 chr3D 96.763 556 16 1 1843 2396 69461032 69460477 0.000000e+00 926.0
37 TraesCS7D01G489200 chr3D 92.101 557 19 9 1837 2391 69462361 69461828 0.000000e+00 761.0
38 TraesCS7D01G489200 chr3D 95.349 258 12 0 2974 3231 452015965 452015708 1.060000e-110 411.0
39 TraesCS7D01G489200 chr6D 96.505 372 12 1 1 371 231083149 231083520 7.510000e-172 614.0
40 TraesCS7D01G489200 chr6D 96.981 265 8 0 446 710 231083531 231083795 2.900000e-121 446.0
41 TraesCS7D01G489200 chr6D 92.453 53 4 0 658 710 87112301 87112353 4.380000e-10 76.8
42 TraesCS7D01G489200 chr6B 96.109 257 10 0 2973 3229 100904262 100904518 1.760000e-113 420.0
43 TraesCS7D01G489200 chr6B 96.154 182 7 0 2137 2318 640328114 640327933 8.590000e-77 298.0
44 TraesCS7D01G489200 chr6B 95.604 182 8 0 2137 2318 640329350 640329169 4.000000e-75 292.0
45 TraesCS7D01G489200 chr6B 91.139 158 14 0 335 492 633410233 633410390 8.900000e-52 215.0
46 TraesCS7D01G489200 chr5B 95.703 256 11 0 2974 3229 396146362 396146617 2.940000e-111 412.0
47 TraesCS7D01G489200 chr2B 95.703 256 11 0 2975 3230 5809883 5810138 2.940000e-111 412.0
48 TraesCS7D01G489200 chr2B 90.196 204 17 3 1898 2100 6776198 6776399 3.130000e-66 263.0
49 TraesCS7D01G489200 chr2B 89.706 204 18 3 1898 2100 6768555 6768756 1.460000e-64 257.0
50 TraesCS7D01G489200 chr2B 89.706 204 18 3 1898 2100 6816515 6816716 1.460000e-64 257.0
51 TraesCS7D01G489200 chr2B 89.706 204 18 3 1898 2100 6824175 6824376 1.460000e-64 257.0
52 TraesCS7D01G489200 chr2B 91.908 173 13 1 2146 2317 6824363 6824535 1.470000e-59 241.0
53 TraesCS7D01G489200 chr2B 91.908 173 13 1 2146 2317 6911825 6911997 1.470000e-59 241.0
54 TraesCS7D01G489200 chr2B 88.333 60 5 2 658 716 8624590 8624532 2.040000e-08 71.3
55 TraesCS7D01G489200 chr2B 89.286 56 5 1 729 783 705532288 705532233 7.330000e-08 69.4
56 TraesCS7D01G489200 chr1A 89.474 228 24 0 1962 2189 249398293 249398520 5.170000e-74 289.0
57 TraesCS7D01G489200 chr1A 88.430 242 15 9 1868 2103 249410082 249410316 3.110000e-71 279.0
58 TraesCS7D01G489200 chr6A 89.785 186 14 2 1843 2023 205777104 205777289 2.460000e-57 233.0
59 TraesCS7D01G489200 chr6A 96.491 57 2 0 731 787 104509037 104509093 1.210000e-15 95.3
60 TraesCS7D01G489200 chr2D 87.709 179 15 6 1843 2018 292661639 292661465 6.930000e-48 202.0
61 TraesCS7D01G489200 chr1B 93.966 116 7 0 597 712 252371684 252371569 4.200000e-40 176.0
62 TraesCS7D01G489200 chr4A 94.444 72 4 0 710 781 532898333 532898262 1.200000e-20 111.0
63 TraesCS7D01G489200 chr4D 92.593 54 4 0 658 711 172884101 172884154 1.220000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G489200 chr7D 598725855 598729941 4086 True 7548.000000 7548 100.000000 1 4087 1 chr7D.!!$R5 4086
1 TraesCS7D01G489200 chr7D 544554180 544554875 695 True 832.000000 832 88.809000 1 672 1 chr7D.!!$R4 671
2 TraesCS7D01G489200 chr7A 691273693 691276305 2612 True 817.333333 1563 90.501000 783 4087 3 chr7A.!!$R2 3304
3 TraesCS7D01G489200 chr7A 691287290 691290363 3073 True 421.250000 630 87.525000 993 4087 4 chr7A.!!$R3 3094
4 TraesCS7D01G489200 chr5D 35486042 35486750 708 False 1140.000000 1140 95.646000 1 712 1 chr5D.!!$F2 711
5 TraesCS7D01G489200 chr5D 539781104 539781750 646 False 522.500000 592 96.399000 1 711 2 chr5D.!!$F7 710
6 TraesCS7D01G489200 chr5D 446096893 446097597 704 False 505.500000 713 94.348500 3305 4087 2 chr5D.!!$F6 782
7 TraesCS7D01G489200 chr5D 445884847 445885986 1139 False 339.666667 388 83.529667 1012 2799 3 chr5D.!!$F5 1787
8 TraesCS7D01G489200 chr7B 82144596 82145310 714 True 1090.000000 1090 94.266000 1 711 1 chr7B.!!$R1 710
9 TraesCS7D01G489200 chr7B 648784350 648785977 1627 True 528.500000 643 92.362000 1961 2394 2 chr7B.!!$R2 433
10 TraesCS7D01G489200 chr7B 678340358 678342916 2558 True 364.250000 529 89.819500 1027 2973 4 chr7B.!!$R3 1946
11 TraesCS7D01G489200 chr7B 678567862 678568962 1100 True 254.666667 296 85.170667 1243 2807 3 chr7B.!!$R4 1564
12 TraesCS7D01G489200 chr3D 69460477 69462361 1884 True 843.500000 926 94.432000 1837 2396 2 chr3D.!!$R2 559
13 TraesCS7D01G489200 chr6D 231083149 231083795 646 False 530.000000 614 96.743000 1 710 2 chr6D.!!$F2 709
14 TraesCS7D01G489200 chr6B 640327933 640329350 1417 True 295.000000 298 95.879000 2137 2318 2 chr6B.!!$R1 181

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
672 702 0.721718 GGATGGCAGAGTTTTCGTCG 59.278 55.0 0.0 0.0 0.0 5.12 F
2062 2428 0.172578 GCCTTTTGTATTCCCACGGC 59.827 55.0 0.0 0.0 0.0 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2089 2455 0.026674 CAGGCATTCGTGCGTATGTG 59.973 55.0 11.58 1.69 35.24 3.21 R
3196 6839 0.036164 CAGGACCATGGTTCAACCGA 59.964 55.0 25.54 0.00 42.58 4.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
591 621 2.852075 AGGAGGCGGGGTTTCACA 60.852 61.111 0.00 0.00 0.00 3.58
672 702 0.721718 GGATGGCAGAGTTTTCGTCG 59.278 55.000 0.00 0.00 0.00 5.12
673 703 1.671850 GGATGGCAGAGTTTTCGTCGA 60.672 52.381 0.00 0.00 0.00 4.20
728 758 9.062367 AGTGTAGATATATAATTTGATGGCCCT 57.938 33.333 0.00 0.00 0.00 5.19
729 759 9.113838 GTGTAGATATATAATTTGATGGCCCTG 57.886 37.037 0.00 0.00 0.00 4.45
730 760 8.274322 TGTAGATATATAATTTGATGGCCCTGG 58.726 37.037 0.00 0.00 0.00 4.45
731 761 7.529534 AGATATATAATTTGATGGCCCTGGA 57.470 36.000 0.00 0.00 0.00 3.86
732 762 7.349598 AGATATATAATTTGATGGCCCTGGAC 58.650 38.462 0.00 0.00 0.00 4.02
734 764 2.629017 AATTTGATGGCCCTGGACTT 57.371 45.000 0.00 0.00 0.00 3.01
735 765 3.756082 AATTTGATGGCCCTGGACTTA 57.244 42.857 0.00 0.00 0.00 2.24
737 767 1.965414 TTGATGGCCCTGGACTTAGA 58.035 50.000 0.00 0.00 0.00 2.10
738 768 2.196742 TGATGGCCCTGGACTTAGAT 57.803 50.000 0.00 0.00 0.00 1.98
739 769 1.770658 TGATGGCCCTGGACTTAGATG 59.229 52.381 0.00 0.00 0.00 2.90
740 770 1.771255 GATGGCCCTGGACTTAGATGT 59.229 52.381 0.00 0.00 0.00 3.06
742 772 1.204146 GGCCCTGGACTTAGATGTGA 58.796 55.000 0.00 0.00 0.00 3.58
743 773 1.134371 GGCCCTGGACTTAGATGTGAC 60.134 57.143 0.00 0.00 0.00 3.67
744 774 1.555075 GCCCTGGACTTAGATGTGACA 59.445 52.381 0.00 0.00 0.00 3.58
745 775 2.171448 GCCCTGGACTTAGATGTGACAT 59.829 50.000 0.00 0.00 0.00 3.06
746 776 3.742640 GCCCTGGACTTAGATGTGACATC 60.743 52.174 17.46 17.46 0.00 3.06
749 779 4.163078 CCTGGACTTAGATGTGACATCCTT 59.837 45.833 21.05 7.22 0.00 3.36
750 780 5.363868 CCTGGACTTAGATGTGACATCCTTA 59.636 44.000 21.05 6.22 0.00 2.69
751 781 6.127054 CCTGGACTTAGATGTGACATCCTTAA 60.127 42.308 21.05 13.11 0.00 1.85
752 782 7.252612 TGGACTTAGATGTGACATCCTTAAA 57.747 36.000 21.05 10.18 0.00 1.52
753 783 7.861629 TGGACTTAGATGTGACATCCTTAAAT 58.138 34.615 21.05 5.23 0.00 1.40
754 784 8.988060 TGGACTTAGATGTGACATCCTTAAATA 58.012 33.333 21.05 4.10 0.00 1.40
781 811 5.592054 TCTAGATGTGAGTTAGCAATTCCG 58.408 41.667 0.00 0.00 0.00 4.30
808 838 1.218316 GAGACTCGCCGTTTCCCAT 59.782 57.895 0.00 0.00 0.00 4.00
898 928 2.084681 CCGGAGTTTCGAACGACGG 61.085 63.158 13.12 13.12 44.44 4.79
903 933 0.954452 AGTTTCGAACGACGGTACCT 59.046 50.000 10.90 0.00 42.82 3.08
904 934 2.151202 AGTTTCGAACGACGGTACCTA 58.849 47.619 10.90 0.00 42.82 3.08
954 998 3.900388 AGAGTAGTATAAAGCGCGAGG 57.100 47.619 12.10 0.00 0.00 4.63
1221 1284 1.226802 CAGTCTCCTGATCCGTGCG 60.227 63.158 0.00 0.00 41.50 5.34
1386 1458 0.881796 GCCAGTAAGCCAACAACTCC 59.118 55.000 0.00 0.00 0.00 3.85
1397 1469 2.422597 CAACAACTCCGGCTGTTCATA 58.577 47.619 11.95 0.00 33.51 2.15
1398 1470 3.009723 CAACAACTCCGGCTGTTCATAT 58.990 45.455 11.95 0.00 33.51 1.78
1399 1471 4.188462 CAACAACTCCGGCTGTTCATATA 58.812 43.478 11.95 0.00 33.51 0.86
1401 1473 5.036117 ACAACTCCGGCTGTTCATATATT 57.964 39.130 9.25 0.00 0.00 1.28
1402 1474 5.437060 ACAACTCCGGCTGTTCATATATTT 58.563 37.500 9.25 0.00 0.00 1.40
1403 1475 6.588204 ACAACTCCGGCTGTTCATATATTTA 58.412 36.000 9.25 0.00 0.00 1.40
1407 1479 8.691661 ACTCCGGCTGTTCATATATTTATTTT 57.308 30.769 0.00 0.00 0.00 1.82
1451 1546 3.374042 TGTGGTTGGTTTCTCTTTCCA 57.626 42.857 0.00 0.00 0.00 3.53
1452 1547 3.909732 TGTGGTTGGTTTCTCTTTCCAT 58.090 40.909 0.00 0.00 0.00 3.41
1453 1548 3.888930 TGTGGTTGGTTTCTCTTTCCATC 59.111 43.478 0.00 0.00 0.00 3.51
1454 1549 3.255888 GTGGTTGGTTTCTCTTTCCATCC 59.744 47.826 0.00 0.00 39.92 3.51
1455 1550 2.826128 GGTTGGTTTCTCTTTCCATCCC 59.174 50.000 0.00 0.00 35.96 3.85
1512 1798 3.208884 GACGAGTCGGTGCTGTGGT 62.209 63.158 18.30 0.00 0.00 4.16
1819 2108 6.827586 TGACAAACAAGTCAGTTAACCTTT 57.172 33.333 0.88 0.00 43.18 3.11
1914 2280 5.186797 CAGAGGTAGGAGAAAGAAGACACAT 59.813 44.000 0.00 0.00 0.00 3.21
1917 2283 4.938226 GGTAGGAGAAAGAAGACACATTGG 59.062 45.833 0.00 0.00 0.00 3.16
1933 2299 6.337356 ACACATTGGACACGAAGAAATTTTT 58.663 32.000 0.00 0.00 0.00 1.94
2041 2407 2.223876 GGTACAAACACACTCGAGGTCA 60.224 50.000 18.41 0.00 0.00 4.02
2042 2408 2.225068 ACAAACACACTCGAGGTCAG 57.775 50.000 18.41 6.15 0.00 3.51
2043 2409 1.202533 ACAAACACACTCGAGGTCAGG 60.203 52.381 18.41 3.92 0.00 3.86
2044 2410 0.249911 AAACACACTCGAGGTCAGGC 60.250 55.000 18.41 0.00 0.00 4.85
2045 2411 2.100879 AACACACTCGAGGTCAGGCC 62.101 60.000 18.41 0.00 37.58 5.19
2057 2423 2.100197 GGTCAGGCCTTTTGTATTCCC 58.900 52.381 0.00 0.00 0.00 3.97
2058 2424 2.556559 GGTCAGGCCTTTTGTATTCCCA 60.557 50.000 0.00 0.00 0.00 4.37
2059 2425 2.492088 GTCAGGCCTTTTGTATTCCCAC 59.508 50.000 0.00 0.00 0.00 4.61
2060 2426 1.472480 CAGGCCTTTTGTATTCCCACG 59.528 52.381 0.00 0.00 0.00 4.94
2061 2427 0.815095 GGCCTTTTGTATTCCCACGG 59.185 55.000 0.00 0.00 0.00 4.94
2062 2428 0.172578 GCCTTTTGTATTCCCACGGC 59.827 55.000 0.00 0.00 0.00 5.68
2063 2429 1.540267 CCTTTTGTATTCCCACGGCA 58.460 50.000 0.00 0.00 0.00 5.69
2064 2430 1.472480 CCTTTTGTATTCCCACGGCAG 59.528 52.381 0.00 0.00 0.00 4.85
2065 2431 0.885196 TTTTGTATTCCCACGGCAGC 59.115 50.000 0.00 0.00 0.00 5.25
2066 2432 1.302383 TTTGTATTCCCACGGCAGCG 61.302 55.000 0.00 0.00 0.00 5.18
2067 2433 3.573491 GTATTCCCACGGCAGCGC 61.573 66.667 0.00 0.00 0.00 5.92
2068 2434 4.089239 TATTCCCACGGCAGCGCA 62.089 61.111 11.47 0.00 0.00 6.09
2082 2448 2.813908 CGCAGCTCCCACGTTACC 60.814 66.667 0.00 0.00 0.00 2.85
2083 2449 2.663196 GCAGCTCCCACGTTACCT 59.337 61.111 0.00 0.00 0.00 3.08
2084 2450 1.741770 GCAGCTCCCACGTTACCTG 60.742 63.158 0.00 0.00 0.00 4.00
2085 2451 1.671742 CAGCTCCCACGTTACCTGT 59.328 57.895 0.00 0.00 0.00 4.00
2086 2452 0.670546 CAGCTCCCACGTTACCTGTG 60.671 60.000 0.00 0.00 37.09 3.66
2087 2453 2.033194 GCTCCCACGTTACCTGTGC 61.033 63.158 0.00 0.00 36.01 4.57
2088 2454 1.736645 CTCCCACGTTACCTGTGCG 60.737 63.158 0.00 0.00 36.01 5.34
2089 2455 3.419759 CCCACGTTACCTGTGCGC 61.420 66.667 0.00 0.00 36.01 6.09
2090 2456 2.663520 CCACGTTACCTGTGCGCA 60.664 61.111 5.66 5.66 36.01 6.09
2091 2457 2.549282 CACGTTACCTGTGCGCAC 59.451 61.111 33.11 33.11 0.00 5.34
2092 2458 2.107343 ACGTTACCTGTGCGCACA 59.893 55.556 38.28 38.28 39.32 4.57
2093 2459 1.301401 ACGTTACCTGTGCGCACAT 60.301 52.632 40.50 29.64 41.01 3.21
2094 2460 0.038067 ACGTTACCTGTGCGCACATA 60.038 50.000 40.50 28.55 41.01 2.29
2095 2461 0.368907 CGTTACCTGTGCGCACATAC 59.631 55.000 40.50 30.41 41.01 2.39
2096 2462 0.368907 GTTACCTGTGCGCACATACG 59.631 55.000 40.50 30.61 41.01 3.06
2104 2470 4.550965 CGCACATACGCACGAATG 57.449 55.556 0.00 0.00 0.00 2.67
2113 2479 2.482374 GCACGAATGCCTGCAGAC 59.518 61.111 17.39 3.38 46.97 3.51
2114 2480 2.037136 GCACGAATGCCTGCAGACT 61.037 57.895 17.39 0.00 46.97 3.24
2115 2481 1.975363 GCACGAATGCCTGCAGACTC 61.975 60.000 17.39 4.40 46.97 3.36
2116 2482 1.078848 ACGAATGCCTGCAGACTCC 60.079 57.895 17.39 0.80 0.00 3.85
2117 2483 2.169789 CGAATGCCTGCAGACTCCG 61.170 63.158 17.39 8.12 0.00 4.63
2118 2484 2.437359 AATGCCTGCAGACTCCGC 60.437 61.111 17.39 10.31 0.00 5.54
2119 2485 2.866085 GAATGCCTGCAGACTCCGCT 62.866 60.000 17.39 0.00 0.00 5.52
2120 2486 3.677284 ATGCCTGCAGACTCCGCTG 62.677 63.158 17.39 0.00 38.91 5.18
2126 2492 2.505777 CAGACTCCGCTGCTCACG 60.506 66.667 0.00 0.00 0.00 4.35
2127 2493 2.673341 AGACTCCGCTGCTCACGA 60.673 61.111 0.00 0.00 0.00 4.35
2128 2494 2.202544 GACTCCGCTGCTCACGAG 60.203 66.667 0.00 0.00 0.00 4.18
2353 4009 0.172803 GGACTCGACCGTGCACTTAT 59.827 55.000 16.19 0.00 0.00 1.73
2527 4366 0.439985 CTCGTTCGTGCTGGTCAATG 59.560 55.000 0.00 0.00 0.00 2.82
2541 4380 1.304052 CAATGAGGCCACCGGGAAA 60.304 57.895 6.32 0.00 35.59 3.13
2691 5450 2.404995 CGACCTCGGCTACGTCCTT 61.405 63.158 0.00 0.00 41.85 3.36
2756 5515 2.106683 CGCCCGTCATCTTGTTCCC 61.107 63.158 0.00 0.00 0.00 3.97
2799 5558 0.389948 AGTGGAAGATGACGCCGTTC 60.390 55.000 0.00 0.00 0.00 3.95
2849 5624 1.780025 GCTCTTGCATTAGCTCGGGC 61.780 60.000 0.00 0.00 42.74 6.13
2910 5752 9.342308 CTTTCCTTGAATTAGCCTGATTATGTA 57.658 33.333 0.00 0.00 0.00 2.29
2915 5757 9.276590 CTTGAATTAGCCTGATTATGTACATCA 57.723 33.333 12.68 0.98 0.00 3.07
2942 6583 6.433404 ACGAAGTTCTACTTGATGACCTCTTA 59.567 38.462 0.56 0.00 37.78 2.10
2952 6595 8.641498 ACTTGATGACCTCTTAAACATTGAAT 57.359 30.769 0.00 0.00 0.00 2.57
2958 6601 9.739276 ATGACCTCTTAAACATTGAATTACTCA 57.261 29.630 0.00 0.00 0.00 3.41
2971 6614 6.716934 TGAATTACTCACAGATCTCCCTAC 57.283 41.667 0.00 0.00 0.00 3.18
2972 6615 5.598830 TGAATTACTCACAGATCTCCCTACC 59.401 44.000 0.00 0.00 0.00 3.18
2973 6616 2.463047 ACTCACAGATCTCCCTACCC 57.537 55.000 0.00 0.00 0.00 3.69
2974 6617 1.323412 CTCACAGATCTCCCTACCCG 58.677 60.000 0.00 0.00 0.00 5.28
2975 6618 0.924090 TCACAGATCTCCCTACCCGA 59.076 55.000 0.00 0.00 0.00 5.14
2976 6619 1.286849 TCACAGATCTCCCTACCCGAA 59.713 52.381 0.00 0.00 0.00 4.30
2977 6620 2.108168 CACAGATCTCCCTACCCGAAA 58.892 52.381 0.00 0.00 0.00 3.46
2978 6621 2.500098 CACAGATCTCCCTACCCGAAAA 59.500 50.000 0.00 0.00 0.00 2.29
2979 6622 3.134804 CACAGATCTCCCTACCCGAAAAT 59.865 47.826 0.00 0.00 0.00 1.82
2980 6623 3.134804 ACAGATCTCCCTACCCGAAAATG 59.865 47.826 0.00 0.00 0.00 2.32
2981 6624 3.134804 CAGATCTCCCTACCCGAAAATGT 59.865 47.826 0.00 0.00 0.00 2.71
2982 6625 3.780850 AGATCTCCCTACCCGAAAATGTT 59.219 43.478 0.00 0.00 0.00 2.71
2983 6626 3.343941 TCTCCCTACCCGAAAATGTTG 57.656 47.619 0.00 0.00 0.00 3.33
2984 6627 2.640826 TCTCCCTACCCGAAAATGTTGT 59.359 45.455 0.00 0.00 0.00 3.32
2985 6628 3.839490 TCTCCCTACCCGAAAATGTTGTA 59.161 43.478 0.00 0.00 0.00 2.41
2986 6629 3.937079 CTCCCTACCCGAAAATGTTGTAC 59.063 47.826 0.00 0.00 0.00 2.90
2987 6630 2.674357 CCCTACCCGAAAATGTTGTACG 59.326 50.000 0.00 0.00 0.00 3.67
2988 6631 2.674357 CCTACCCGAAAATGTTGTACGG 59.326 50.000 0.00 0.00 42.67 4.02
2989 6632 2.547299 ACCCGAAAATGTTGTACGGA 57.453 45.000 0.00 0.00 45.31 4.69
2990 6633 2.848691 ACCCGAAAATGTTGTACGGAA 58.151 42.857 0.00 0.00 45.31 4.30
2991 6634 2.549329 ACCCGAAAATGTTGTACGGAAC 59.451 45.455 0.00 0.00 45.31 3.62
2992 6635 2.095617 CCCGAAAATGTTGTACGGAACC 60.096 50.000 0.00 0.00 45.31 3.62
2993 6636 2.548904 CCGAAAATGTTGTACGGAACCA 59.451 45.455 0.00 0.00 45.31 3.67
2994 6637 3.189702 CCGAAAATGTTGTACGGAACCAT 59.810 43.478 0.00 0.00 45.31 3.55
2995 6638 4.155449 CGAAAATGTTGTACGGAACCATG 58.845 43.478 0.00 0.00 0.00 3.66
2996 6639 4.481463 GAAAATGTTGTACGGAACCATGG 58.519 43.478 11.19 11.19 0.00 3.66
2997 6640 2.871096 ATGTTGTACGGAACCATGGT 57.129 45.000 13.00 13.00 0.00 3.55
2998 6641 2.642154 TGTTGTACGGAACCATGGTT 57.358 45.000 30.23 30.23 41.54 3.67
3014 6657 3.908737 GTTCAGCCGAACCTACACT 57.091 52.632 1.04 0.00 44.92 3.55
3015 6658 1.711206 GTTCAGCCGAACCTACACTC 58.289 55.000 1.04 0.00 44.92 3.51
3016 6659 0.242825 TTCAGCCGAACCTACACTCG 59.757 55.000 0.00 0.00 34.83 4.18
3017 6660 0.607217 TCAGCCGAACCTACACTCGA 60.607 55.000 0.00 0.00 37.23 4.04
3018 6661 0.456312 CAGCCGAACCTACACTCGAC 60.456 60.000 0.00 0.00 37.23 4.20
3019 6662 0.892358 AGCCGAACCTACACTCGACA 60.892 55.000 0.00 0.00 37.23 4.35
3020 6663 0.731855 GCCGAACCTACACTCGACAC 60.732 60.000 0.00 0.00 37.23 3.67
3021 6664 0.109412 CCGAACCTACACTCGACACC 60.109 60.000 0.00 0.00 37.23 4.16
3022 6665 0.594602 CGAACCTACACTCGACACCA 59.405 55.000 0.00 0.00 37.23 4.17
3023 6666 1.201647 CGAACCTACACTCGACACCAT 59.798 52.381 0.00 0.00 37.23 3.55
3024 6667 2.352421 CGAACCTACACTCGACACCATT 60.352 50.000 0.00 0.00 37.23 3.16
3025 6668 2.743636 ACCTACACTCGACACCATTG 57.256 50.000 0.00 0.00 0.00 2.82
3026 6669 2.244695 ACCTACACTCGACACCATTGA 58.755 47.619 0.00 0.00 0.00 2.57
3027 6670 2.832129 ACCTACACTCGACACCATTGAT 59.168 45.455 0.00 0.00 0.00 2.57
3028 6671 3.260884 ACCTACACTCGACACCATTGATT 59.739 43.478 0.00 0.00 0.00 2.57
3029 6672 4.253685 CCTACACTCGACACCATTGATTT 58.746 43.478 0.00 0.00 0.00 2.17
3030 6673 4.330074 CCTACACTCGACACCATTGATTTC 59.670 45.833 0.00 0.00 0.00 2.17
3031 6674 4.008074 ACACTCGACACCATTGATTTCT 57.992 40.909 0.00 0.00 0.00 2.52
3032 6675 5.147330 ACACTCGACACCATTGATTTCTA 57.853 39.130 0.00 0.00 0.00 2.10
3033 6676 5.171476 ACACTCGACACCATTGATTTCTAG 58.829 41.667 0.00 0.00 0.00 2.43
3034 6677 5.047306 ACACTCGACACCATTGATTTCTAGA 60.047 40.000 0.00 0.00 0.00 2.43
3035 6678 5.289675 CACTCGACACCATTGATTTCTAGAC 59.710 44.000 0.00 0.00 0.00 2.59
3036 6679 5.047306 ACTCGACACCATTGATTTCTAGACA 60.047 40.000 0.00 0.00 0.00 3.41
3037 6680 5.168569 TCGACACCATTGATTTCTAGACAC 58.831 41.667 0.00 0.00 0.00 3.67
3038 6681 5.047306 TCGACACCATTGATTTCTAGACACT 60.047 40.000 0.00 0.00 0.00 3.55
3039 6682 6.152154 TCGACACCATTGATTTCTAGACACTA 59.848 38.462 0.00 0.00 0.00 2.74
3040 6683 6.980978 CGACACCATTGATTTCTAGACACTAT 59.019 38.462 0.00 0.00 0.00 2.12
3041 6684 7.492669 CGACACCATTGATTTCTAGACACTATT 59.507 37.037 0.00 0.00 0.00 1.73
3042 6685 8.723942 ACACCATTGATTTCTAGACACTATTC 57.276 34.615 0.00 0.00 0.00 1.75
3043 6686 8.321353 ACACCATTGATTTCTAGACACTATTCA 58.679 33.333 0.00 0.00 0.00 2.57
3044 6687 9.334947 CACCATTGATTTCTAGACACTATTCAT 57.665 33.333 0.00 0.00 0.00 2.57
3045 6688 9.334947 ACCATTGATTTCTAGACACTATTCATG 57.665 33.333 0.00 0.00 0.00 3.07
3046 6689 9.551734 CCATTGATTTCTAGACACTATTCATGA 57.448 33.333 0.00 0.00 0.00 3.07
3048 6691 9.775854 ATTGATTTCTAGACACTATTCATGAGG 57.224 33.333 0.00 0.00 0.00 3.86
3049 6692 8.539117 TGATTTCTAGACACTATTCATGAGGA 57.461 34.615 0.00 0.00 0.00 3.71
3050 6693 9.152327 TGATTTCTAGACACTATTCATGAGGAT 57.848 33.333 0.00 0.00 0.00 3.24
3051 6694 9.638239 GATTTCTAGACACTATTCATGAGGATC 57.362 37.037 0.00 0.00 0.00 3.36
3052 6695 7.531857 TTCTAGACACTATTCATGAGGATCC 57.468 40.000 2.48 2.48 0.00 3.36
3053 6696 6.614657 TCTAGACACTATTCATGAGGATCCA 58.385 40.000 15.82 0.00 0.00 3.41
3054 6697 7.244558 TCTAGACACTATTCATGAGGATCCAT 58.755 38.462 15.82 0.00 0.00 3.41
3055 6698 8.394040 TCTAGACACTATTCATGAGGATCCATA 58.606 37.037 15.82 1.97 0.00 2.74
3056 6699 7.238486 AGACACTATTCATGAGGATCCATAC 57.762 40.000 15.82 5.60 0.00 2.39
3057 6700 6.784473 AGACACTATTCATGAGGATCCATACA 59.216 38.462 15.82 11.40 0.00 2.29
3058 6701 7.457218 AGACACTATTCATGAGGATCCATACAT 59.543 37.037 15.82 13.20 0.00 2.29
3059 6702 7.392418 ACACTATTCATGAGGATCCATACATG 58.608 38.462 26.36 26.36 40.65 3.21
3060 6703 7.236225 ACACTATTCATGAGGATCCATACATGA 59.764 37.037 28.71 28.71 44.40 3.07
3061 6704 8.265764 CACTATTCATGAGGATCCATACATGAT 58.734 37.037 30.77 25.01 45.05 2.45
3062 6705 8.833734 ACTATTCATGAGGATCCATACATGATT 58.166 33.333 30.77 28.66 45.05 2.57
3063 6706 7.939784 ATTCATGAGGATCCATACATGATTG 57.060 36.000 30.77 17.36 45.05 2.67
3064 6707 6.691255 TCATGAGGATCCATACATGATTGA 57.309 37.500 28.71 17.40 42.31 2.57
3065 6708 7.266905 TCATGAGGATCCATACATGATTGAT 57.733 36.000 28.71 3.69 42.31 2.57
3066 6709 7.696017 TCATGAGGATCCATACATGATTGATT 58.304 34.615 28.71 3.31 42.31 2.57
3067 6710 8.828751 TCATGAGGATCCATACATGATTGATTA 58.171 33.333 28.71 15.50 42.31 1.75
3068 6711 9.457436 CATGAGGATCCATACATGATTGATTAA 57.543 33.333 27.38 0.00 41.45 1.40
3070 6713 9.865152 TGAGGATCCATACATGATTGATTAAAA 57.135 29.630 15.82 0.00 0.00 1.52
3103 6746 5.300411 ACATGCATGTCTATTCATGAGGA 57.700 39.130 26.61 0.00 45.41 3.71
3104 6747 5.877491 ACATGCATGTCTATTCATGAGGAT 58.123 37.500 26.61 0.00 45.41 3.24
3105 6748 5.938710 ACATGCATGTCTATTCATGAGGATC 59.061 40.000 26.61 0.00 45.41 3.36
3106 6749 4.903054 TGCATGTCTATTCATGAGGATCC 58.097 43.478 2.48 2.48 45.41 3.36
3107 6750 4.348754 TGCATGTCTATTCATGAGGATCCA 59.651 41.667 15.82 0.00 45.41 3.41
3108 6751 5.013808 TGCATGTCTATTCATGAGGATCCAT 59.986 40.000 15.82 0.00 45.41 3.41
3109 6752 5.354513 GCATGTCTATTCATGAGGATCCATG 59.645 44.000 15.82 10.15 45.41 3.66
3110 6753 4.903054 TGTCTATTCATGAGGATCCATGC 58.097 43.478 15.82 3.29 42.63 4.06
3111 6754 4.348754 TGTCTATTCATGAGGATCCATGCA 59.651 41.667 15.82 9.47 42.63 3.96
3112 6755 5.013808 TGTCTATTCATGAGGATCCATGCAT 59.986 40.000 15.82 11.45 42.63 3.96
3113 6756 5.354513 GTCTATTCATGAGGATCCATGCATG 59.645 44.000 24.86 24.86 42.63 4.06
3145 6788 4.489249 GCAGTTGGCATGCATGTC 57.511 55.556 24.40 24.40 43.31 3.06
3146 6789 1.587568 GCAGTTGGCATGCATGTCA 59.412 52.632 29.45 29.45 43.31 3.58
3147 6790 0.734942 GCAGTTGGCATGCATGTCAC 60.735 55.000 32.61 25.01 42.90 3.67
3148 6791 0.599060 CAGTTGGCATGCATGTCACA 59.401 50.000 32.61 22.14 42.90 3.58
3149 6792 0.885879 AGTTGGCATGCATGTCACAG 59.114 50.000 32.61 4.10 42.90 3.66
3150 6793 0.883153 GTTGGCATGCATGTCACAGA 59.117 50.000 32.61 16.64 42.90 3.41
3151 6794 1.475280 GTTGGCATGCATGTCACAGAT 59.525 47.619 32.61 0.00 42.90 2.90
3152 6795 1.385528 TGGCATGCATGTCACAGATC 58.614 50.000 29.45 8.91 37.51 2.75
3153 6796 0.666913 GGCATGCATGTCACAGATCC 59.333 55.000 26.04 12.69 31.41 3.36
3154 6797 1.385528 GCATGCATGTCACAGATCCA 58.614 50.000 26.79 0.00 0.00 3.41
3155 6798 1.065102 GCATGCATGTCACAGATCCAC 59.935 52.381 26.79 2.80 0.00 4.02
3156 6799 2.361789 CATGCATGTCACAGATCCACA 58.638 47.619 18.91 0.00 0.00 4.17
3157 6800 2.793288 TGCATGTCACAGATCCACAT 57.207 45.000 0.00 0.00 0.00 3.21
3158 6801 2.361789 TGCATGTCACAGATCCACATG 58.638 47.619 15.45 15.45 46.86 3.21
3159 6802 2.290450 TGCATGTCACAGATCCACATGT 60.290 45.455 18.61 0.00 46.17 3.21
3160 6803 3.055240 TGCATGTCACAGATCCACATGTA 60.055 43.478 18.61 14.43 46.17 2.29
3161 6804 3.558829 GCATGTCACAGATCCACATGTAG 59.441 47.826 18.61 0.00 46.17 2.74
3162 6805 4.763073 CATGTCACAGATCCACATGTAGT 58.237 43.478 0.00 0.00 41.64 2.73
3163 6806 5.682212 GCATGTCACAGATCCACATGTAGTA 60.682 44.000 18.61 0.00 46.17 1.82
3164 6807 5.582689 TGTCACAGATCCACATGTAGTAG 57.417 43.478 0.00 0.00 0.00 2.57
3165 6808 4.402474 TGTCACAGATCCACATGTAGTAGG 59.598 45.833 0.00 0.00 0.00 3.18
3166 6809 4.645136 GTCACAGATCCACATGTAGTAGGA 59.355 45.833 0.00 0.75 33.79 2.94
3167 6810 5.303078 GTCACAGATCCACATGTAGTAGGAT 59.697 44.000 13.74 13.74 39.37 3.24
3168 6811 5.302823 TCACAGATCCACATGTAGTAGGATG 59.697 44.000 17.66 10.05 37.88 3.51
3169 6812 5.069648 CACAGATCCACATGTAGTAGGATGT 59.930 44.000 17.66 12.17 37.88 3.06
3170 6813 5.663106 ACAGATCCACATGTAGTAGGATGTT 59.337 40.000 17.66 5.71 37.88 2.71
3171 6814 6.839134 ACAGATCCACATGTAGTAGGATGTTA 59.161 38.462 17.66 0.00 37.88 2.41
3172 6815 7.344612 ACAGATCCACATGTAGTAGGATGTTAA 59.655 37.037 17.66 0.00 37.88 2.01
3173 6816 8.204160 CAGATCCACATGTAGTAGGATGTTAAA 58.796 37.037 17.66 0.00 37.88 1.52
3174 6817 8.938883 AGATCCACATGTAGTAGGATGTTAAAT 58.061 33.333 17.66 0.00 37.88 1.40
3175 6818 9.209175 GATCCACATGTAGTAGGATGTTAAATC 57.791 37.037 17.66 2.02 37.88 2.17
3176 6819 7.207383 TCCACATGTAGTAGGATGTTAAATCG 58.793 38.462 0.00 0.00 30.14 3.34
3177 6820 6.984474 CCACATGTAGTAGGATGTTAAATCGT 59.016 38.462 0.00 0.00 30.14 3.73
3178 6821 8.139350 CCACATGTAGTAGGATGTTAAATCGTA 58.861 37.037 0.00 0.00 30.14 3.43
3179 6822 8.965172 CACATGTAGTAGGATGTTAAATCGTAC 58.035 37.037 0.00 7.04 38.78 3.67
3180 6823 7.859377 ACATGTAGTAGGATGTTAAATCGTACG 59.141 37.037 9.53 9.53 41.55 3.67
3181 6824 6.728200 TGTAGTAGGATGTTAAATCGTACGG 58.272 40.000 16.52 0.00 41.55 4.02
3182 6825 4.614946 AGTAGGATGTTAAATCGTACGGC 58.385 43.478 16.52 0.16 41.55 5.68
3183 6826 3.530265 AGGATGTTAAATCGTACGGCA 57.470 42.857 16.52 0.00 0.00 5.69
3184 6827 4.067972 AGGATGTTAAATCGTACGGCAT 57.932 40.909 16.52 10.10 0.00 4.40
3185 6828 5.204409 AGGATGTTAAATCGTACGGCATA 57.796 39.130 16.52 3.15 0.00 3.14
3186 6829 5.227908 AGGATGTTAAATCGTACGGCATAG 58.772 41.667 16.52 0.00 0.00 2.23
3187 6830 5.010314 AGGATGTTAAATCGTACGGCATAGA 59.990 40.000 16.52 0.00 0.00 1.98
3188 6831 5.118203 GGATGTTAAATCGTACGGCATAGAC 59.882 44.000 16.52 8.30 0.00 2.59
3189 6832 4.362279 TGTTAAATCGTACGGCATAGACC 58.638 43.478 16.52 0.00 0.00 3.85
3190 6833 4.142204 TGTTAAATCGTACGGCATAGACCA 60.142 41.667 16.52 0.68 0.00 4.02
3191 6834 3.746045 AAATCGTACGGCATAGACCAT 57.254 42.857 16.52 0.00 0.00 3.55
3192 6835 4.859304 AAATCGTACGGCATAGACCATA 57.141 40.909 16.52 0.00 0.00 2.74
3193 6836 4.436242 AATCGTACGGCATAGACCATAG 57.564 45.455 16.52 0.00 0.00 2.23
3194 6837 2.156917 TCGTACGGCATAGACCATAGG 58.843 52.381 16.52 0.00 0.00 2.57
3195 6838 1.884579 CGTACGGCATAGACCATAGGT 59.115 52.381 7.57 0.00 39.44 3.08
3196 6839 2.295349 CGTACGGCATAGACCATAGGTT 59.705 50.000 7.57 0.00 35.25 3.50
3197 6840 3.611057 CGTACGGCATAGACCATAGGTTC 60.611 52.174 7.57 0.00 35.25 3.62
3198 6841 1.340248 ACGGCATAGACCATAGGTTCG 59.660 52.381 0.00 0.00 35.25 3.95
3199 6842 1.336887 CGGCATAGACCATAGGTTCGG 60.337 57.143 0.00 0.00 35.25 4.30
3200 6843 1.692519 GGCATAGACCATAGGTTCGGT 59.307 52.381 0.00 0.00 35.25 4.69
3201 6844 2.104281 GGCATAGACCATAGGTTCGGTT 59.896 50.000 0.00 0.00 35.25 4.44
3202 6845 3.131396 GCATAGACCATAGGTTCGGTTG 58.869 50.000 0.00 0.00 35.25 3.77
3203 6846 3.181469 GCATAGACCATAGGTTCGGTTGA 60.181 47.826 0.00 0.00 35.25 3.18
3204 6847 4.682320 GCATAGACCATAGGTTCGGTTGAA 60.682 45.833 0.00 0.00 35.25 2.69
3213 6856 3.332706 TTCGGTTGAACCATGGTCC 57.667 52.632 20.07 14.14 38.47 4.46
3214 6857 0.768622 TTCGGTTGAACCATGGTCCT 59.231 50.000 20.07 2.47 38.47 3.85
3215 6858 0.036164 TCGGTTGAACCATGGTCCTG 59.964 55.000 20.07 11.58 38.47 3.86
3216 6859 0.036164 CGGTTGAACCATGGTCCTGA 59.964 55.000 20.07 1.71 38.47 3.86
3217 6860 1.544537 CGGTTGAACCATGGTCCTGAA 60.545 52.381 20.07 0.20 38.47 3.02
3218 6861 2.807676 GGTTGAACCATGGTCCTGAAT 58.192 47.619 20.07 0.00 38.42 2.57
3219 6862 2.755103 GGTTGAACCATGGTCCTGAATC 59.245 50.000 20.07 11.54 38.42 2.52
3220 6863 3.420893 GTTGAACCATGGTCCTGAATCA 58.579 45.455 20.07 14.27 0.00 2.57
3221 6864 3.071874 TGAACCATGGTCCTGAATCAC 57.928 47.619 20.07 2.45 0.00 3.06
3222 6865 2.009774 GAACCATGGTCCTGAATCACG 58.990 52.381 20.07 0.00 0.00 4.35
3223 6866 0.984230 ACCATGGTCCTGAATCACGT 59.016 50.000 13.00 0.00 0.00 4.49
3224 6867 1.066143 ACCATGGTCCTGAATCACGTC 60.066 52.381 13.00 0.00 0.00 4.34
3225 6868 1.208052 CCATGGTCCTGAATCACGTCT 59.792 52.381 2.57 0.00 0.00 4.18
3226 6869 2.544685 CATGGTCCTGAATCACGTCTC 58.455 52.381 0.00 0.00 0.00 3.36
3227 6870 1.924731 TGGTCCTGAATCACGTCTCT 58.075 50.000 0.00 0.00 0.00 3.10
3228 6871 1.819288 TGGTCCTGAATCACGTCTCTC 59.181 52.381 0.00 0.00 0.00 3.20
3229 6872 2.096248 GGTCCTGAATCACGTCTCTCT 58.904 52.381 0.00 0.00 0.00 3.10
3230 6873 2.098443 GGTCCTGAATCACGTCTCTCTC 59.902 54.545 0.00 0.00 0.00 3.20
3231 6874 3.013921 GTCCTGAATCACGTCTCTCTCT 58.986 50.000 0.00 0.00 0.00 3.10
3232 6875 3.064820 GTCCTGAATCACGTCTCTCTCTC 59.935 52.174 0.00 0.00 0.00 3.20
3233 6876 2.357637 CCTGAATCACGTCTCTCTCTCC 59.642 54.545 0.00 0.00 0.00 3.71
3234 6877 2.357637 CTGAATCACGTCTCTCTCTCCC 59.642 54.545 0.00 0.00 0.00 4.30
3235 6878 2.025793 TGAATCACGTCTCTCTCTCCCT 60.026 50.000 0.00 0.00 0.00 4.20
3236 6879 3.200165 TGAATCACGTCTCTCTCTCCCTA 59.800 47.826 0.00 0.00 0.00 3.53
3260 6903 5.817816 ACCTTTCAGTTTATAAGCATCCTCG 59.182 40.000 1.97 0.00 0.00 4.63
3261 6904 5.817816 CCTTTCAGTTTATAAGCATCCTCGT 59.182 40.000 1.97 0.00 0.00 4.18
3262 6905 6.984474 CCTTTCAGTTTATAAGCATCCTCGTA 59.016 38.462 1.97 0.00 0.00 3.43
3264 6907 8.958119 TTTCAGTTTATAAGCATCCTCGTATT 57.042 30.769 1.97 0.00 0.00 1.89
3267 6910 8.826710 TCAGTTTATAAGCATCCTCGTATTTTG 58.173 33.333 1.97 0.00 0.00 2.44
3268 6911 8.826710 CAGTTTATAAGCATCCTCGTATTTTGA 58.173 33.333 1.97 0.00 0.00 2.69
3269 6912 9.561069 AGTTTATAAGCATCCTCGTATTTTGAT 57.439 29.630 1.97 0.00 0.00 2.57
3272 6915 2.880890 AGCATCCTCGTATTTTGATGGC 59.119 45.455 0.00 0.00 36.09 4.40
3274 6917 1.948104 TCCTCGTATTTTGATGGCCG 58.052 50.000 0.00 0.00 0.00 6.13
3275 6918 1.208535 TCCTCGTATTTTGATGGCCGT 59.791 47.619 0.00 0.00 0.00 5.68
3276 6919 1.330521 CCTCGTATTTTGATGGCCGTG 59.669 52.381 0.00 0.00 0.00 4.94
3277 6920 2.276201 CTCGTATTTTGATGGCCGTGA 58.724 47.619 0.00 0.00 0.00 4.35
3278 6921 2.675844 CTCGTATTTTGATGGCCGTGAA 59.324 45.455 0.00 0.00 0.00 3.18
3279 6922 3.275143 TCGTATTTTGATGGCCGTGAAT 58.725 40.909 0.00 2.54 0.00 2.57
3281 6924 4.156922 TCGTATTTTGATGGCCGTGAATTT 59.843 37.500 0.00 0.00 0.00 1.82
3282 6925 4.862018 CGTATTTTGATGGCCGTGAATTTT 59.138 37.500 0.00 0.00 0.00 1.82
3283 6926 6.030849 CGTATTTTGATGGCCGTGAATTTTA 58.969 36.000 0.00 0.00 0.00 1.52
3284 6927 6.196353 CGTATTTTGATGGCCGTGAATTTTAG 59.804 38.462 0.00 0.00 0.00 1.85
3285 6928 5.461032 TTTTGATGGCCGTGAATTTTAGT 57.539 34.783 0.00 0.00 0.00 2.24
3286 6929 6.576662 TTTTGATGGCCGTGAATTTTAGTA 57.423 33.333 0.00 0.00 0.00 1.82
3300 6955 7.850982 GTGAATTTTAGTATGAGTTATGTGGCG 59.149 37.037 0.00 0.00 0.00 5.69
3303 6958 6.897259 TTTAGTATGAGTTATGTGGCGAAC 57.103 37.500 0.00 0.00 0.00 3.95
3344 7064 7.755582 AGAGTTCAAAACTTTTGAAAATCGG 57.244 32.000 24.69 0.00 43.03 4.18
3360 7080 7.093992 TGAAAATCGGTGTTTTCTTCAAACTT 58.906 30.769 16.64 0.00 44.68 2.66
3419 7139 3.378512 ACAGGGAGATAGATGAAGTGCA 58.621 45.455 0.00 0.00 0.00 4.57
3461 7181 3.878778 AGAGCACTCCCAATACATTGTC 58.121 45.455 0.00 0.00 36.06 3.18
3466 7186 4.218417 GCACTCCCAATACATTGTCAAGTT 59.782 41.667 0.00 0.00 36.06 2.66
3467 7187 5.702865 CACTCCCAATACATTGTCAAGTTG 58.297 41.667 0.00 0.00 36.06 3.16
3484 7204 2.078392 GTTGTCGAATAAAGCCCGGAA 58.922 47.619 0.73 0.00 0.00 4.30
3505 7261 0.670162 CCGTGGATGGGAAATGATGC 59.330 55.000 0.00 0.00 0.00 3.91
3506 7262 1.683943 CGTGGATGGGAAATGATGCT 58.316 50.000 0.00 0.00 0.00 3.79
3507 7263 1.335810 CGTGGATGGGAAATGATGCTG 59.664 52.381 0.00 0.00 0.00 4.41
3508 7264 2.381911 GTGGATGGGAAATGATGCTGT 58.618 47.619 0.00 0.00 0.00 4.40
3509 7265 2.762327 GTGGATGGGAAATGATGCTGTT 59.238 45.455 0.00 0.00 0.00 3.16
3510 7266 3.953612 GTGGATGGGAAATGATGCTGTTA 59.046 43.478 0.00 0.00 0.00 2.41
3511 7267 4.037208 GTGGATGGGAAATGATGCTGTTAG 59.963 45.833 0.00 0.00 0.00 2.34
3512 7268 4.210331 GGATGGGAAATGATGCTGTTAGT 58.790 43.478 0.00 0.00 0.00 2.24
3513 7269 4.037208 GGATGGGAAATGATGCTGTTAGTG 59.963 45.833 0.00 0.00 0.00 2.74
3514 7270 4.299586 TGGGAAATGATGCTGTTAGTGA 57.700 40.909 0.00 0.00 0.00 3.41
3515 7271 4.858850 TGGGAAATGATGCTGTTAGTGAT 58.141 39.130 0.00 0.00 0.00 3.06
3516 7272 5.263599 TGGGAAATGATGCTGTTAGTGATT 58.736 37.500 0.00 0.00 0.00 2.57
3517 7273 5.716228 TGGGAAATGATGCTGTTAGTGATTT 59.284 36.000 0.00 0.00 0.00 2.17
3518 7274 6.127647 TGGGAAATGATGCTGTTAGTGATTTC 60.128 38.462 0.00 0.00 0.00 2.17
3519 7275 6.096001 GGGAAATGATGCTGTTAGTGATTTCT 59.904 38.462 0.00 0.00 31.80 2.52
3520 7276 7.192232 GGAAATGATGCTGTTAGTGATTTCTC 58.808 38.462 0.00 0.00 31.80 2.87
3521 7277 5.980698 ATGATGCTGTTAGTGATTTCTCG 57.019 39.130 0.00 0.00 0.00 4.04
3522 7278 4.820897 TGATGCTGTTAGTGATTTCTCGT 58.179 39.130 0.00 0.00 0.00 4.18
3523 7279 5.961272 TGATGCTGTTAGTGATTTCTCGTA 58.039 37.500 0.00 0.00 0.00 3.43
3524 7280 5.805486 TGATGCTGTTAGTGATTTCTCGTAC 59.195 40.000 0.00 0.00 0.00 3.67
3525 7281 5.128992 TGCTGTTAGTGATTTCTCGTACA 57.871 39.130 0.00 0.00 0.00 2.90
3526 7282 5.161358 TGCTGTTAGTGATTTCTCGTACAG 58.839 41.667 0.00 0.00 0.00 2.74
3527 7283 5.162075 GCTGTTAGTGATTTCTCGTACAGT 58.838 41.667 0.00 0.00 0.00 3.55
3528 7284 5.634020 GCTGTTAGTGATTTCTCGTACAGTT 59.366 40.000 0.00 0.00 0.00 3.16
3529 7285 6.145696 GCTGTTAGTGATTTCTCGTACAGTTT 59.854 38.462 0.00 0.00 0.00 2.66
3530 7286 7.402811 TGTTAGTGATTTCTCGTACAGTTTG 57.597 36.000 0.00 0.00 0.00 2.93
3531 7287 6.982141 TGTTAGTGATTTCTCGTACAGTTTGT 59.018 34.615 0.00 0.00 0.00 2.83
3532 7288 7.493320 TGTTAGTGATTTCTCGTACAGTTTGTT 59.507 33.333 0.00 0.00 0.00 2.83
3533 7289 6.287107 AGTGATTTCTCGTACAGTTTGTTG 57.713 37.500 0.00 0.00 0.00 3.33
3534 7290 5.236478 AGTGATTTCTCGTACAGTTTGTTGG 59.764 40.000 0.00 0.00 0.00 3.77
3535 7291 4.513692 TGATTTCTCGTACAGTTTGTTGGG 59.486 41.667 0.00 0.00 0.00 4.12
3536 7292 1.873698 TCTCGTACAGTTTGTTGGGC 58.126 50.000 0.00 0.00 0.00 5.36
3537 7293 1.139256 TCTCGTACAGTTTGTTGGGCA 59.861 47.619 0.00 0.00 0.00 5.36
3538 7294 1.944024 CTCGTACAGTTTGTTGGGCAA 59.056 47.619 0.00 0.00 34.87 4.52
3539 7295 1.671845 TCGTACAGTTTGTTGGGCAAC 59.328 47.619 0.00 0.00 41.50 4.17
3540 7296 1.673920 CGTACAGTTTGTTGGGCAACT 59.326 47.619 0.00 0.00 41.67 3.16
3541 7297 2.098443 CGTACAGTTTGTTGGGCAACTT 59.902 45.455 0.00 0.00 41.67 2.66
3542 7298 3.428316 CGTACAGTTTGTTGGGCAACTTT 60.428 43.478 0.00 0.00 41.67 2.66
3543 7299 3.694043 ACAGTTTGTTGGGCAACTTTT 57.306 38.095 0.00 0.00 41.67 2.27
3544 7300 4.810191 ACAGTTTGTTGGGCAACTTTTA 57.190 36.364 0.00 0.00 41.67 1.52
3545 7301 5.351948 ACAGTTTGTTGGGCAACTTTTAT 57.648 34.783 0.00 0.00 41.67 1.40
3546 7302 6.472686 ACAGTTTGTTGGGCAACTTTTATA 57.527 33.333 0.00 0.00 41.67 0.98
3547 7303 6.512297 ACAGTTTGTTGGGCAACTTTTATAG 58.488 36.000 0.00 0.00 41.67 1.31
3548 7304 6.322712 ACAGTTTGTTGGGCAACTTTTATAGA 59.677 34.615 0.00 0.00 41.67 1.98
3549 7305 6.863126 CAGTTTGTTGGGCAACTTTTATAGAG 59.137 38.462 0.00 0.00 41.67 2.43
3550 7306 6.549736 AGTTTGTTGGGCAACTTTTATAGAGT 59.450 34.615 0.00 0.00 41.67 3.24
3551 7307 7.722285 AGTTTGTTGGGCAACTTTTATAGAGTA 59.278 33.333 0.00 0.00 41.67 2.59
3552 7308 7.681939 TTGTTGGGCAACTTTTATAGAGTAG 57.318 36.000 0.00 0.00 41.67 2.57
3553 7309 7.011499 TGTTGGGCAACTTTTATAGAGTAGA 57.989 36.000 0.00 0.00 41.67 2.59
3554 7310 6.877322 TGTTGGGCAACTTTTATAGAGTAGAC 59.123 38.462 0.00 0.00 41.67 2.59
3555 7311 6.614694 TGGGCAACTTTTATAGAGTAGACA 57.385 37.500 0.00 0.00 0.00 3.41
3556 7312 7.195374 TGGGCAACTTTTATAGAGTAGACAT 57.805 36.000 0.00 0.00 0.00 3.06
3557 7313 7.630082 TGGGCAACTTTTATAGAGTAGACATT 58.370 34.615 0.00 0.00 0.00 2.71
3558 7314 7.552687 TGGGCAACTTTTATAGAGTAGACATTG 59.447 37.037 0.00 0.00 0.00 2.82
3559 7315 7.410485 GGCAACTTTTATAGAGTAGACATTGC 58.590 38.462 0.00 0.00 0.00 3.56
3560 7316 7.065803 GGCAACTTTTATAGAGTAGACATTGCA 59.934 37.037 0.00 0.00 29.47 4.08
3561 7317 8.616076 GCAACTTTTATAGAGTAGACATTGCAT 58.384 33.333 0.00 0.00 0.00 3.96
3564 7320 9.113838 ACTTTTATAGAGTAGACATTGCATTGG 57.886 33.333 12.87 0.00 0.00 3.16
3565 7321 9.330063 CTTTTATAGAGTAGACATTGCATTGGA 57.670 33.333 12.87 0.00 0.00 3.53
3566 7322 8.893219 TTTATAGAGTAGACATTGCATTGGAG 57.107 34.615 12.87 0.00 0.00 3.86
3567 7323 3.539604 AGAGTAGACATTGCATTGGAGC 58.460 45.455 12.87 2.64 0.00 4.70
3568 7324 3.054875 AGAGTAGACATTGCATTGGAGCA 60.055 43.478 12.87 0.00 43.99 4.26
3569 7325 3.012518 AGTAGACATTGCATTGGAGCAC 58.987 45.455 12.87 5.47 45.61 4.40
3570 7326 1.180029 AGACATTGCATTGGAGCACC 58.820 50.000 12.87 0.00 45.61 5.01
3571 7327 0.174162 GACATTGCATTGGAGCACCC 59.826 55.000 12.87 0.00 45.61 4.61
3572 7328 0.542467 ACATTGCATTGGAGCACCCA 60.542 50.000 12.87 0.00 45.61 4.51
3579 7335 2.600164 TGGAGCACCCAACTTGCA 59.400 55.556 0.00 0.00 43.29 4.08
3580 7336 1.827789 TGGAGCACCCAACTTGCAC 60.828 57.895 0.00 0.00 43.29 4.57
3581 7337 2.564721 GGAGCACCCAACTTGCACC 61.565 63.158 0.00 0.00 42.41 5.01
3582 7338 1.529244 GAGCACCCAACTTGCACCT 60.529 57.895 0.00 0.00 42.83 4.00
3583 7339 1.518903 GAGCACCCAACTTGCACCTC 61.519 60.000 0.00 0.00 42.83 3.85
3584 7340 1.529244 GCACCCAACTTGCACCTCT 60.529 57.895 0.00 0.00 39.93 3.69
3585 7341 1.799258 GCACCCAACTTGCACCTCTG 61.799 60.000 0.00 0.00 39.93 3.35
3586 7342 1.529244 ACCCAACTTGCACCTCTGC 60.529 57.895 0.00 0.00 44.52 4.26
3587 7343 2.270986 CCCAACTTGCACCTCTGCC 61.271 63.158 0.00 0.00 43.51 4.85
3588 7344 2.620112 CCAACTTGCACCTCTGCCG 61.620 63.158 0.00 0.00 43.51 5.69
3589 7345 1.893808 CAACTTGCACCTCTGCCGT 60.894 57.895 0.00 0.00 43.51 5.68
3590 7346 1.893808 AACTTGCACCTCTGCCGTG 60.894 57.895 0.00 0.00 43.51 4.94
3591 7347 2.031012 CTTGCACCTCTGCCGTGA 59.969 61.111 0.00 0.00 43.51 4.35
3592 7348 1.376424 CTTGCACCTCTGCCGTGAT 60.376 57.895 0.00 0.00 43.51 3.06
3593 7349 1.364626 CTTGCACCTCTGCCGTGATC 61.365 60.000 0.00 0.00 43.51 2.92
3594 7350 2.512515 GCACCTCTGCCGTGATCC 60.513 66.667 0.00 0.00 37.45 3.36
3595 7351 3.023949 GCACCTCTGCCGTGATCCT 62.024 63.158 0.00 0.00 37.45 3.24
3596 7352 1.676678 GCACCTCTGCCGTGATCCTA 61.677 60.000 0.00 0.00 37.45 2.94
3597 7353 1.043816 CACCTCTGCCGTGATCCTAT 58.956 55.000 0.00 0.00 32.77 2.57
3598 7354 1.000283 CACCTCTGCCGTGATCCTATC 60.000 57.143 0.00 0.00 32.77 2.08
3599 7355 1.133325 ACCTCTGCCGTGATCCTATCT 60.133 52.381 0.00 0.00 0.00 1.98
3600 7356 1.543802 CCTCTGCCGTGATCCTATCTC 59.456 57.143 0.00 0.00 0.00 2.75
3601 7357 2.513753 CTCTGCCGTGATCCTATCTCT 58.486 52.381 0.00 0.00 0.00 3.10
3602 7358 2.487762 CTCTGCCGTGATCCTATCTCTC 59.512 54.545 0.00 0.00 0.00 3.20
3603 7359 1.198867 CTGCCGTGATCCTATCTCTCG 59.801 57.143 0.00 0.00 0.00 4.04
3604 7360 0.523966 GCCGTGATCCTATCTCTCGG 59.476 60.000 8.89 8.89 39.56 4.63
3605 7361 1.169577 CCGTGATCCTATCTCTCGGG 58.830 60.000 6.04 0.00 36.21 5.14
3606 7362 1.271434 CCGTGATCCTATCTCTCGGGA 60.271 57.143 6.04 0.00 36.21 5.14
3607 7363 1.807742 CGTGATCCTATCTCTCGGGAC 59.192 57.143 0.00 0.00 31.48 4.46
3608 7364 2.551287 CGTGATCCTATCTCTCGGGACT 60.551 54.545 0.00 0.00 31.48 3.85
3632 7388 4.082845 TGTCACTAAGTTCCCTCTCTCTG 58.917 47.826 0.00 0.00 0.00 3.35
3663 7419 1.484653 TGGACATTCCTACGGTGGATG 59.515 52.381 0.00 4.00 37.46 3.51
3671 7427 0.245539 CTACGGTGGATGTTGACGGT 59.754 55.000 0.00 0.00 0.00 4.83
3673 7429 0.179040 ACGGTGGATGTTGACGGTTT 60.179 50.000 0.00 0.00 0.00 3.27
3676 7432 2.548904 CGGTGGATGTTGACGGTTTAAA 59.451 45.455 0.00 0.00 0.00 1.52
3695 7451 7.363793 GGTTTAAATATGAATGCTGAGGTTGGT 60.364 37.037 0.00 0.00 0.00 3.67
3699 7455 6.747414 ATATGAATGCTGAGGTTGGTACTA 57.253 37.500 0.00 0.00 0.00 1.82
3721 7477 1.071699 TGTAGTGAGAAAAAGGGCGCT 59.928 47.619 7.64 0.00 0.00 5.92
3757 7513 9.598517 GTAAATTCCAGCAATCAAATCCAATAA 57.401 29.630 0.00 0.00 0.00 1.40
3773 7529 8.871686 AATCCAATAACTTCTGTTTTCAACAC 57.128 30.769 0.00 0.00 36.25 3.32
3880 7844 5.183713 TGGTCATTTCTCCATCAAATGTGAC 59.816 40.000 0.00 0.00 40.63 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
192 194 2.342406 TCCACATGAGGAGGAGGAAA 57.658 50.000 7.91 0.00 32.77 3.13
557 587 3.102972 CTCCTGTTCCTCTCTCCAATGA 58.897 50.000 0.00 0.00 0.00 2.57
561 591 0.616111 GCCTCCTGTTCCTCTCTCCA 60.616 60.000 0.00 0.00 0.00 3.86
591 621 1.335051 CCATACATCACGCTCGATCGT 60.335 52.381 15.94 8.75 44.35 3.73
672 702 1.135632 CGAGAGAACTTCACGAGGGTC 60.136 57.143 0.00 0.00 41.62 4.46
673 703 0.882474 CGAGAGAACTTCACGAGGGT 59.118 55.000 0.00 0.00 41.62 4.34
712 742 5.402054 AAGTCCAGGGCCATCAAATTATA 57.598 39.130 6.18 0.00 0.00 0.98
713 743 3.979501 AGTCCAGGGCCATCAAATTAT 57.020 42.857 6.18 0.00 0.00 1.28
714 744 3.756082 AAGTCCAGGGCCATCAAATTA 57.244 42.857 6.18 0.00 0.00 1.40
716 746 2.852449 TCTAAGTCCAGGGCCATCAAAT 59.148 45.455 6.18 0.00 0.00 2.32
717 747 2.274542 TCTAAGTCCAGGGCCATCAAA 58.725 47.619 6.18 0.00 0.00 2.69
718 748 1.965414 TCTAAGTCCAGGGCCATCAA 58.035 50.000 6.18 0.00 0.00 2.57
721 751 1.492176 CACATCTAAGTCCAGGGCCAT 59.508 52.381 6.18 0.00 0.00 4.40
722 752 0.911769 CACATCTAAGTCCAGGGCCA 59.088 55.000 6.18 0.00 0.00 5.36
723 753 1.134371 GTCACATCTAAGTCCAGGGCC 60.134 57.143 0.00 0.00 0.00 5.80
728 758 6.867519 TTAAGGATGTCACATCTAAGTCCA 57.132 37.500 17.46 0.00 0.00 4.02
754 784 9.717942 GGAATTGCTAACTCACATCTAGATAAT 57.282 33.333 4.54 0.00 0.00 1.28
756 786 7.014326 ACGGAATTGCTAACTCACATCTAGATA 59.986 37.037 4.54 0.00 0.00 1.98
757 787 6.183360 ACGGAATTGCTAACTCACATCTAGAT 60.183 38.462 0.00 0.00 0.00 1.98
758 788 5.127194 ACGGAATTGCTAACTCACATCTAGA 59.873 40.000 0.00 0.00 0.00 2.43
760 790 5.339008 ACGGAATTGCTAACTCACATCTA 57.661 39.130 0.00 0.00 0.00 1.98
761 791 4.207891 ACGGAATTGCTAACTCACATCT 57.792 40.909 0.00 0.00 0.00 2.90
763 793 7.250569 CAATTAACGGAATTGCTAACTCACAT 58.749 34.615 10.85 0.00 45.97 3.21
775 805 4.567159 GCGAGTCTCTCAATTAACGGAATT 59.433 41.667 0.00 0.00 38.34 2.17
776 806 4.113354 GCGAGTCTCTCAATTAACGGAAT 58.887 43.478 0.00 0.00 0.00 3.01
777 807 3.508762 GCGAGTCTCTCAATTAACGGAA 58.491 45.455 0.00 0.00 0.00 4.30
778 808 2.159282 GGCGAGTCTCTCAATTAACGGA 60.159 50.000 0.00 0.00 0.00 4.69
781 811 2.877335 ACGGCGAGTCTCTCAATTAAC 58.123 47.619 16.62 0.00 0.00 2.01
808 838 5.291614 GGAAATGTATACCGTCGCTTGTTAA 59.708 40.000 0.00 0.00 0.00 2.01
904 934 9.740710 ATGGAAGTTGAATTAAAACTACTAGCT 57.259 29.630 6.46 0.00 36.87 3.32
954 998 1.361668 ATCGAACGACTGGTGCATGC 61.362 55.000 11.82 11.82 0.00 4.06
960 1004 4.022935 TGTTACTACAATCGAACGACTGGT 60.023 41.667 10.15 6.56 0.00 4.00
1221 1284 1.375523 ATCGAACCGCACAGGGAAC 60.376 57.895 0.00 0.00 46.96 3.62
1233 1296 2.023741 CCGCTGCATGCATCGAAC 59.976 61.111 37.40 17.37 43.06 3.95
1402 1474 9.603921 GGTACTACTATTGCACCAGTAAAAATA 57.396 33.333 7.74 0.00 0.00 1.40
1403 1475 8.104566 TGGTACTACTATTGCACCAGTAAAAAT 58.895 33.333 7.74 0.00 34.40 1.82
1407 1479 6.801718 ATGGTACTACTATTGCACCAGTAA 57.198 37.500 7.74 0.00 42.26 2.24
1411 1483 5.182487 CACAATGGTACTACTATTGCACCA 58.818 41.667 19.86 0.78 46.79 4.17
1451 1546 0.259065 TCGCTCTCACCTGTAGGGAT 59.741 55.000 2.53 0.00 40.27 3.85
1452 1547 0.259065 ATCGCTCTCACCTGTAGGGA 59.741 55.000 2.53 0.00 40.27 4.20
1453 1548 1.609555 GTATCGCTCTCACCTGTAGGG 59.390 57.143 2.53 0.00 40.27 3.53
1454 1549 1.264557 CGTATCGCTCTCACCTGTAGG 59.735 57.143 0.00 0.00 42.17 3.18
1455 1550 1.264557 CCGTATCGCTCTCACCTGTAG 59.735 57.143 0.00 0.00 0.00 2.74
1512 1798 3.062466 CACGTCCCTGCTCTCCGA 61.062 66.667 0.00 0.00 0.00 4.55
1779 2065 0.397675 TCATCCTCCAGATCCGTGCT 60.398 55.000 0.00 0.00 30.59 4.40
1914 2280 4.498345 CCGGAAAAATTTCTTCGTGTCCAA 60.498 41.667 0.00 0.00 37.35 3.53
1917 2283 2.977829 GCCGGAAAAATTTCTTCGTGTC 59.022 45.455 5.05 0.00 37.35 3.67
2041 2407 1.615919 CCGTGGGAATACAAAAGGCCT 60.616 52.381 0.00 0.00 0.00 5.19
2042 2408 0.815095 CCGTGGGAATACAAAAGGCC 59.185 55.000 0.00 0.00 0.00 5.19
2043 2409 0.172578 GCCGTGGGAATACAAAAGGC 59.827 55.000 0.00 0.00 36.32 4.35
2044 2410 1.472480 CTGCCGTGGGAATACAAAAGG 59.528 52.381 0.00 0.00 0.00 3.11
2045 2411 1.135402 GCTGCCGTGGGAATACAAAAG 60.135 52.381 0.00 0.00 0.00 2.27
2046 2412 0.885196 GCTGCCGTGGGAATACAAAA 59.115 50.000 0.00 0.00 0.00 2.44
2047 2413 1.302383 CGCTGCCGTGGGAATACAAA 61.302 55.000 0.00 0.00 0.00 2.83
2048 2414 1.743623 CGCTGCCGTGGGAATACAA 60.744 57.895 0.00 0.00 0.00 2.41
2049 2415 2.125310 CGCTGCCGTGGGAATACA 60.125 61.111 0.00 0.00 0.00 2.29
2050 2416 3.573491 GCGCTGCCGTGGGAATAC 61.573 66.667 0.00 0.00 36.67 1.89
2051 2417 4.089239 TGCGCTGCCGTGGGAATA 62.089 61.111 9.73 0.00 36.67 1.75
2062 2428 3.932580 TAACGTGGGAGCTGCGCTG 62.933 63.158 9.73 10.04 39.88 5.18
2063 2429 3.691342 TAACGTGGGAGCTGCGCT 61.691 61.111 9.73 2.68 43.88 5.92
2064 2430 3.488090 GTAACGTGGGAGCTGCGC 61.488 66.667 0.00 0.00 0.00 6.09
2065 2431 2.813908 GGTAACGTGGGAGCTGCG 60.814 66.667 0.00 0.00 0.00 5.18
2066 2432 1.741770 CAGGTAACGTGGGAGCTGC 60.742 63.158 10.47 0.00 46.39 5.25
2067 2433 0.670546 CACAGGTAACGTGGGAGCTG 60.671 60.000 17.96 17.96 44.80 4.24
2068 2434 1.671742 CACAGGTAACGTGGGAGCT 59.328 57.895 0.00 0.00 46.39 4.09
2069 2435 2.033194 GCACAGGTAACGTGGGAGC 61.033 63.158 0.00 0.00 46.39 4.70
2070 2436 4.278956 GCACAGGTAACGTGGGAG 57.721 61.111 0.00 0.00 46.39 4.30
2073 2439 2.663520 TGCGCACAGGTAACGTGG 60.664 61.111 5.66 0.00 46.39 4.94
2074 2440 1.565156 ATGTGCGCACAGGTAACGTG 61.565 55.000 41.77 0.00 45.48 4.49
2075 2441 0.038067 TATGTGCGCACAGGTAACGT 60.038 50.000 41.77 28.11 45.48 3.99
2076 2442 0.368907 GTATGTGCGCACAGGTAACG 59.631 55.000 41.77 0.00 45.48 3.18
2077 2443 0.368907 CGTATGTGCGCACAGGTAAC 59.631 55.000 41.77 32.60 45.48 2.50
2078 2444 2.744461 CGTATGTGCGCACAGGTAA 58.256 52.632 41.77 26.50 45.48 2.85
2079 2445 4.487401 CGTATGTGCGCACAGGTA 57.513 55.556 41.77 29.80 45.48 3.08
2087 2453 1.648165 GCATTCGTGCGTATGTGCG 60.648 57.895 11.58 0.00 37.81 5.34
2088 2454 1.297598 GGCATTCGTGCGTATGTGC 60.298 57.895 11.58 0.52 35.24 4.57
2089 2455 0.026674 CAGGCATTCGTGCGTATGTG 59.973 55.000 11.58 1.69 35.24 3.21
2090 2456 1.705337 GCAGGCATTCGTGCGTATGT 61.705 55.000 11.58 0.00 43.03 2.29
2091 2457 1.010797 GCAGGCATTCGTGCGTATG 60.011 57.895 6.80 6.80 43.03 2.39
2092 2458 3.409856 GCAGGCATTCGTGCGTAT 58.590 55.556 0.00 0.00 43.03 3.06
2097 2463 1.364626 GGAGTCTGCAGGCATTCGTG 61.365 60.000 22.50 0.00 0.00 4.35
2098 2464 1.078848 GGAGTCTGCAGGCATTCGT 60.079 57.895 22.50 0.00 0.00 3.85
2099 2465 2.169789 CGGAGTCTGCAGGCATTCG 61.170 63.158 22.50 16.43 0.00 3.34
2100 2466 2.467826 GCGGAGTCTGCAGGCATTC 61.468 63.158 22.50 10.22 0.00 2.67
2101 2467 2.437359 GCGGAGTCTGCAGGCATT 60.437 61.111 22.50 0.00 0.00 3.56
2102 2468 3.397439 AGCGGAGTCTGCAGGCAT 61.397 61.111 25.51 5.45 33.85 4.40
2103 2469 4.383861 CAGCGGAGTCTGCAGGCA 62.384 66.667 25.51 0.00 33.85 4.75
2109 2475 2.505777 CGTGAGCAGCGGAGTCTG 60.506 66.667 0.00 0.00 35.40 3.51
2110 2476 2.673341 TCGTGAGCAGCGGAGTCT 60.673 61.111 0.00 0.00 0.00 3.24
2111 2477 2.202544 CTCGTGAGCAGCGGAGTC 60.203 66.667 0.00 0.00 0.00 3.36
2353 4009 1.717791 CGTGATAGTGGCGACCGGTA 61.718 60.000 7.34 0.00 0.00 4.02
2516 4355 1.303561 GTGGCCTCATTGACCAGCA 60.304 57.895 3.32 0.00 33.12 4.41
2631 5390 2.679342 CCCTTCCCCAAGATCGCCA 61.679 63.158 0.00 0.00 0.00 5.69
2766 5525 1.452108 CCACTTCTGATTCGGGCCC 60.452 63.158 13.57 13.57 0.00 5.80
2799 5558 4.509970 TGTAACAAACTCTGTCGTCAATGG 59.490 41.667 0.00 0.00 37.23 3.16
2884 5726 8.230472 ACATAATCAGGCTAATTCAAGGAAAG 57.770 34.615 0.00 0.00 0.00 2.62
2910 5752 5.707242 TCAAGTAGAACTTCGTCTGATGT 57.293 39.130 0.00 0.00 36.03 3.06
2915 5757 4.767928 AGGTCATCAAGTAGAACTTCGTCT 59.232 41.667 0.00 0.00 36.03 4.18
2923 6564 9.219603 CAATGTTTAAGAGGTCATCAAGTAGAA 57.780 33.333 0.00 0.00 0.00 2.10
2925 6566 8.777865 TCAATGTTTAAGAGGTCATCAAGTAG 57.222 34.615 0.00 0.00 0.00 2.57
2927 6568 8.641498 ATTCAATGTTTAAGAGGTCATCAAGT 57.359 30.769 0.00 0.00 0.00 3.16
2942 6583 7.337942 GGGAGATCTGTGAGTAATTCAATGTTT 59.662 37.037 0.00 0.00 37.61 2.83
2952 6595 3.687551 CGGGTAGGGAGATCTGTGAGTAA 60.688 52.174 0.00 0.00 0.00 2.24
2958 6601 2.544844 TTTCGGGTAGGGAGATCTGT 57.455 50.000 0.00 0.00 0.00 3.41
2971 6614 2.095617 GGTTCCGTACAACATTTTCGGG 60.096 50.000 0.00 0.00 41.27 5.14
2972 6615 2.548904 TGGTTCCGTACAACATTTTCGG 59.451 45.455 0.00 0.00 42.12 4.30
2973 6616 3.881780 TGGTTCCGTACAACATTTTCG 57.118 42.857 0.00 0.00 0.00 3.46
2974 6617 4.022676 ACCATGGTTCCGTACAACATTTTC 60.023 41.667 13.00 0.00 0.00 2.29
2975 6618 3.892588 ACCATGGTTCCGTACAACATTTT 59.107 39.130 13.00 0.00 0.00 1.82
2976 6619 3.492337 ACCATGGTTCCGTACAACATTT 58.508 40.909 13.00 0.00 0.00 2.32
2977 6620 3.149005 ACCATGGTTCCGTACAACATT 57.851 42.857 13.00 0.00 0.00 2.71
2978 6621 2.871096 ACCATGGTTCCGTACAACAT 57.129 45.000 13.00 0.00 0.00 2.71
2979 6622 2.496111 GAACCATGGTTCCGTACAACA 58.504 47.619 37.55 0.00 46.21 3.33
2997 6640 0.242825 CGAGTGTAGGTTCGGCTGAA 59.757 55.000 3.13 3.13 33.39 3.02
2998 6641 0.607217 TCGAGTGTAGGTTCGGCTGA 60.607 55.000 0.00 0.00 37.42 4.26
2999 6642 0.456312 GTCGAGTGTAGGTTCGGCTG 60.456 60.000 0.00 0.00 38.33 4.85
3000 6643 0.892358 TGTCGAGTGTAGGTTCGGCT 60.892 55.000 0.21 0.00 41.65 5.52
3001 6644 0.731855 GTGTCGAGTGTAGGTTCGGC 60.732 60.000 0.00 0.00 41.49 5.54
3002 6645 0.109412 GGTGTCGAGTGTAGGTTCGG 60.109 60.000 0.00 0.00 37.42 4.30
3003 6646 0.594602 TGGTGTCGAGTGTAGGTTCG 59.405 55.000 0.00 0.00 38.13 3.95
3004 6647 2.993899 CAATGGTGTCGAGTGTAGGTTC 59.006 50.000 0.00 0.00 0.00 3.62
3005 6648 2.631062 TCAATGGTGTCGAGTGTAGGTT 59.369 45.455 0.00 0.00 0.00 3.50
3006 6649 2.244695 TCAATGGTGTCGAGTGTAGGT 58.755 47.619 0.00 0.00 0.00 3.08
3007 6650 3.526931 ATCAATGGTGTCGAGTGTAGG 57.473 47.619 0.00 0.00 0.00 3.18
3008 6651 5.171476 AGAAATCAATGGTGTCGAGTGTAG 58.829 41.667 0.00 0.00 0.00 2.74
3009 6652 5.147330 AGAAATCAATGGTGTCGAGTGTA 57.853 39.130 0.00 0.00 0.00 2.90
3010 6653 4.008074 AGAAATCAATGGTGTCGAGTGT 57.992 40.909 0.00 0.00 0.00 3.55
3011 6654 5.289675 GTCTAGAAATCAATGGTGTCGAGTG 59.710 44.000 0.00 0.00 0.00 3.51
3012 6655 5.047306 TGTCTAGAAATCAATGGTGTCGAGT 60.047 40.000 0.00 0.00 0.00 4.18
3013 6656 5.289675 GTGTCTAGAAATCAATGGTGTCGAG 59.710 44.000 0.00 0.00 0.00 4.04
3014 6657 5.047306 AGTGTCTAGAAATCAATGGTGTCGA 60.047 40.000 0.00 0.00 0.00 4.20
3015 6658 5.171476 AGTGTCTAGAAATCAATGGTGTCG 58.829 41.667 0.00 0.00 0.00 4.35
3016 6659 8.723942 AATAGTGTCTAGAAATCAATGGTGTC 57.276 34.615 0.00 0.00 0.00 3.67
3017 6660 8.321353 TGAATAGTGTCTAGAAATCAATGGTGT 58.679 33.333 0.00 0.00 0.00 4.16
3018 6661 8.722480 TGAATAGTGTCTAGAAATCAATGGTG 57.278 34.615 0.00 0.00 0.00 4.17
3019 6662 9.334947 CATGAATAGTGTCTAGAAATCAATGGT 57.665 33.333 0.00 0.00 0.00 3.55
3020 6663 9.551734 TCATGAATAGTGTCTAGAAATCAATGG 57.448 33.333 0.00 0.00 0.00 3.16
3022 6665 9.775854 CCTCATGAATAGTGTCTAGAAATCAAT 57.224 33.333 0.00 0.00 0.00 2.57
3023 6666 8.981659 TCCTCATGAATAGTGTCTAGAAATCAA 58.018 33.333 0.00 0.00 0.00 2.57
3024 6667 8.539117 TCCTCATGAATAGTGTCTAGAAATCA 57.461 34.615 0.00 0.00 0.00 2.57
3025 6668 9.638239 GATCCTCATGAATAGTGTCTAGAAATC 57.362 37.037 0.00 0.00 0.00 2.17
3026 6669 8.592809 GGATCCTCATGAATAGTGTCTAGAAAT 58.407 37.037 3.84 0.00 0.00 2.17
3027 6670 7.565029 TGGATCCTCATGAATAGTGTCTAGAAA 59.435 37.037 14.23 0.00 0.00 2.52
3028 6671 7.069344 TGGATCCTCATGAATAGTGTCTAGAA 58.931 38.462 14.23 0.00 0.00 2.10
3029 6672 6.614657 TGGATCCTCATGAATAGTGTCTAGA 58.385 40.000 14.23 0.00 0.00 2.43
3030 6673 6.907853 TGGATCCTCATGAATAGTGTCTAG 57.092 41.667 14.23 0.00 0.00 2.43
3031 6674 7.950124 TGTATGGATCCTCATGAATAGTGTCTA 59.050 37.037 14.23 0.00 0.00 2.59
3032 6675 6.784473 TGTATGGATCCTCATGAATAGTGTCT 59.216 38.462 14.23 0.00 0.00 3.41
3033 6676 6.997655 TGTATGGATCCTCATGAATAGTGTC 58.002 40.000 14.23 0.00 0.00 3.67
3034 6677 7.236225 TCATGTATGGATCCTCATGAATAGTGT 59.764 37.037 28.18 5.10 42.01 3.55
3035 6678 7.618137 TCATGTATGGATCCTCATGAATAGTG 58.382 38.462 28.18 14.32 42.01 2.74
3036 6679 7.803487 TCATGTATGGATCCTCATGAATAGT 57.197 36.000 28.18 6.17 42.01 2.12
3037 6680 9.110502 CAATCATGTATGGATCCTCATGAATAG 57.889 37.037 30.96 23.96 45.83 1.73
3038 6681 8.828751 TCAATCATGTATGGATCCTCATGAATA 58.171 33.333 30.96 22.56 45.83 1.75
3039 6682 7.696017 TCAATCATGTATGGATCCTCATGAAT 58.304 34.615 30.96 25.53 45.83 2.57
3040 6683 7.081857 TCAATCATGTATGGATCCTCATGAA 57.918 36.000 30.96 21.14 45.83 2.57
3041 6684 6.691255 TCAATCATGTATGGATCCTCATGA 57.309 37.500 30.20 30.20 46.43 3.07
3042 6685 7.939784 AATCAATCATGTATGGATCCTCATG 57.060 36.000 25.06 25.06 38.96 3.07
3044 6687 9.865152 TTTTAATCAATCATGTATGGATCCTCA 57.135 29.630 14.23 10.04 0.00 3.86
3081 6724 5.300411 TCCTCATGAATAGACATGCATGT 57.700 39.130 31.82 31.82 45.35 3.21
3082 6725 5.354513 GGATCCTCATGAATAGACATGCATG 59.645 44.000 25.09 25.09 46.18 4.06
3083 6726 5.013808 TGGATCCTCATGAATAGACATGCAT 59.986 40.000 14.23 0.00 44.79 3.96
3084 6727 4.348754 TGGATCCTCATGAATAGACATGCA 59.651 41.667 14.23 0.00 44.79 3.96
3085 6728 4.903054 TGGATCCTCATGAATAGACATGC 58.097 43.478 14.23 0.00 44.79 4.06
3086 6729 5.354513 GCATGGATCCTCATGAATAGACATG 59.645 44.000 14.23 17.94 45.30 3.21
3087 6730 5.013808 TGCATGGATCCTCATGAATAGACAT 59.986 40.000 14.23 0.00 45.30 3.06
3088 6731 4.348754 TGCATGGATCCTCATGAATAGACA 59.651 41.667 14.23 0.00 45.30 3.41
3089 6732 4.903054 TGCATGGATCCTCATGAATAGAC 58.097 43.478 14.23 0.00 45.30 2.59
3090 6733 5.497474 CATGCATGGATCCTCATGAATAGA 58.503 41.667 24.98 0.00 45.30 1.98
3091 6734 5.819825 CATGCATGGATCCTCATGAATAG 57.180 43.478 24.98 10.24 45.30 1.73
3128 6771 0.734942 GTGACATGCATGCCAACTGC 60.735 55.000 26.53 6.09 40.10 4.40
3129 6772 0.599060 TGTGACATGCATGCCAACTG 59.401 50.000 26.53 9.94 0.00 3.16
3130 6773 0.885879 CTGTGACATGCATGCCAACT 59.114 50.000 26.53 6.52 0.00 3.16
3131 6774 0.883153 TCTGTGACATGCATGCCAAC 59.117 50.000 26.53 20.50 0.00 3.77
3132 6775 1.746787 GATCTGTGACATGCATGCCAA 59.253 47.619 26.53 7.48 0.00 4.52
3133 6776 1.385528 GATCTGTGACATGCATGCCA 58.614 50.000 26.53 19.63 0.00 4.92
3134 6777 0.666913 GGATCTGTGACATGCATGCC 59.333 55.000 26.53 16.86 0.00 4.40
3135 6778 1.065102 GTGGATCTGTGACATGCATGC 59.935 52.381 26.53 18.59 0.00 4.06
3136 6779 2.361789 TGTGGATCTGTGACATGCATG 58.638 47.619 25.09 25.09 0.00 4.06
3137 6780 2.793288 TGTGGATCTGTGACATGCAT 57.207 45.000 0.00 0.00 0.00 3.96
3138 6781 2.361789 CATGTGGATCTGTGACATGCA 58.638 47.619 11.86 0.00 40.27 3.96
3141 6784 5.069648 CCTACTACATGTGGATCTGTGACAT 59.930 44.000 16.98 0.00 0.00 3.06
3142 6785 4.402474 CCTACTACATGTGGATCTGTGACA 59.598 45.833 16.98 0.00 0.00 3.58
3143 6786 4.645136 TCCTACTACATGTGGATCTGTGAC 59.355 45.833 16.98 0.00 0.00 3.67
3144 6787 4.867086 TCCTACTACATGTGGATCTGTGA 58.133 43.478 16.98 1.02 0.00 3.58
3145 6788 5.069648 ACATCCTACTACATGTGGATCTGTG 59.930 44.000 16.98 10.78 35.72 3.66
3146 6789 5.211973 ACATCCTACTACATGTGGATCTGT 58.788 41.667 16.98 9.38 35.72 3.41
3147 6790 5.798125 ACATCCTACTACATGTGGATCTG 57.202 43.478 16.98 8.78 35.72 2.90
3148 6791 7.914427 TTAACATCCTACTACATGTGGATCT 57.086 36.000 16.98 7.55 35.72 2.75
3149 6792 9.209175 GATTTAACATCCTACTACATGTGGATC 57.791 37.037 16.98 0.15 35.72 3.36
3150 6793 7.872993 CGATTTAACATCCTACTACATGTGGAT 59.127 37.037 16.98 12.59 37.19 3.41
3151 6794 7.147794 ACGATTTAACATCCTACTACATGTGGA 60.148 37.037 16.98 10.67 33.38 4.02
3152 6795 6.984474 ACGATTTAACATCCTACTACATGTGG 59.016 38.462 9.11 8.41 33.38 4.17
3153 6796 8.965172 GTACGATTTAACATCCTACTACATGTG 58.035 37.037 9.11 0.93 33.38 3.21
3154 6797 7.859377 CGTACGATTTAACATCCTACTACATGT 59.141 37.037 10.44 2.69 34.58 3.21
3155 6798 7.325338 CCGTACGATTTAACATCCTACTACATG 59.675 40.741 18.76 0.00 0.00 3.21
3156 6799 7.365741 CCGTACGATTTAACATCCTACTACAT 58.634 38.462 18.76 0.00 0.00 2.29
3157 6800 6.728200 CCGTACGATTTAACATCCTACTACA 58.272 40.000 18.76 0.00 0.00 2.74
3158 6801 5.626955 GCCGTACGATTTAACATCCTACTAC 59.373 44.000 18.76 0.00 0.00 2.73
3159 6802 5.299028 TGCCGTACGATTTAACATCCTACTA 59.701 40.000 18.76 0.00 0.00 1.82
3160 6803 4.098349 TGCCGTACGATTTAACATCCTACT 59.902 41.667 18.76 0.00 0.00 2.57
3161 6804 4.362279 TGCCGTACGATTTAACATCCTAC 58.638 43.478 18.76 0.00 0.00 3.18
3162 6805 4.652421 TGCCGTACGATTTAACATCCTA 57.348 40.909 18.76 0.00 0.00 2.94
3163 6806 3.530265 TGCCGTACGATTTAACATCCT 57.470 42.857 18.76 0.00 0.00 3.24
3164 6807 5.118203 GTCTATGCCGTACGATTTAACATCC 59.882 44.000 18.76 0.02 0.00 3.51
3165 6808 5.118203 GGTCTATGCCGTACGATTTAACATC 59.882 44.000 18.76 0.00 0.00 3.06
3166 6809 4.986659 GGTCTATGCCGTACGATTTAACAT 59.013 41.667 18.76 11.95 0.00 2.71
3167 6810 4.142204 TGGTCTATGCCGTACGATTTAACA 60.142 41.667 18.76 5.25 0.00 2.41
3168 6811 4.362279 TGGTCTATGCCGTACGATTTAAC 58.638 43.478 18.76 7.41 0.00 2.01
3169 6812 4.652421 TGGTCTATGCCGTACGATTTAA 57.348 40.909 18.76 0.00 0.00 1.52
3170 6813 4.859304 ATGGTCTATGCCGTACGATTTA 57.141 40.909 18.76 3.95 0.00 1.40
3171 6814 3.746045 ATGGTCTATGCCGTACGATTT 57.254 42.857 18.76 2.85 0.00 2.17
3172 6815 3.192844 CCTATGGTCTATGCCGTACGATT 59.807 47.826 18.76 3.24 0.00 3.34
3173 6816 2.753452 CCTATGGTCTATGCCGTACGAT 59.247 50.000 18.76 5.70 0.00 3.73
3174 6817 2.156917 CCTATGGTCTATGCCGTACGA 58.843 52.381 18.76 0.00 0.00 3.43
3175 6818 1.884579 ACCTATGGTCTATGCCGTACG 59.115 52.381 8.69 8.69 0.00 3.67
3176 6819 3.611057 CGAACCTATGGTCTATGCCGTAC 60.611 52.174 0.00 0.00 33.12 3.67
3177 6820 2.555325 CGAACCTATGGTCTATGCCGTA 59.445 50.000 0.00 0.00 33.12 4.02
3178 6821 1.340248 CGAACCTATGGTCTATGCCGT 59.660 52.381 0.00 0.00 33.12 5.68
3179 6822 1.336887 CCGAACCTATGGTCTATGCCG 60.337 57.143 0.00 0.00 33.12 5.69
3180 6823 1.692519 ACCGAACCTATGGTCTATGCC 59.307 52.381 0.00 0.00 33.12 4.40
3181 6824 3.131396 CAACCGAACCTATGGTCTATGC 58.869 50.000 0.00 0.00 37.54 3.14
3182 6825 4.665833 TCAACCGAACCTATGGTCTATG 57.334 45.455 0.00 0.00 37.54 2.23
3183 6826 5.019785 GTTCAACCGAACCTATGGTCTAT 57.980 43.478 0.00 0.00 44.92 1.98
3184 6827 4.460948 GTTCAACCGAACCTATGGTCTA 57.539 45.455 0.00 0.00 44.92 2.59
3185 6828 3.329929 GTTCAACCGAACCTATGGTCT 57.670 47.619 0.00 0.00 44.92 3.85
3195 6838 0.768622 AGGACCATGGTTCAACCGAA 59.231 50.000 25.54 0.00 42.58 4.30
3196 6839 0.036164 CAGGACCATGGTTCAACCGA 59.964 55.000 25.54 0.00 42.58 4.69
3197 6840 0.036164 TCAGGACCATGGTTCAACCG 59.964 55.000 25.54 14.03 42.58 4.44
3198 6841 2.286365 TTCAGGACCATGGTTCAACC 57.714 50.000 25.54 18.22 39.22 3.77
3199 6842 3.191371 GTGATTCAGGACCATGGTTCAAC 59.809 47.826 25.54 13.00 0.00 3.18
3200 6843 3.420893 GTGATTCAGGACCATGGTTCAA 58.579 45.455 25.54 12.05 0.00 2.69
3201 6844 2.615240 CGTGATTCAGGACCATGGTTCA 60.615 50.000 25.54 17.34 0.00 3.18
3202 6845 2.009774 CGTGATTCAGGACCATGGTTC 58.990 52.381 20.85 18.49 0.00 3.62
3203 6846 1.351017 ACGTGATTCAGGACCATGGTT 59.649 47.619 20.85 0.38 0.00 3.67
3204 6847 0.984230 ACGTGATTCAGGACCATGGT 59.016 50.000 19.89 19.89 0.00 3.55
3205 6848 1.208052 AGACGTGATTCAGGACCATGG 59.792 52.381 11.19 11.19 0.00 3.66
3206 6849 2.167281 AGAGACGTGATTCAGGACCATG 59.833 50.000 13.00 0.00 0.00 3.66
3207 6850 2.428890 GAGAGACGTGATTCAGGACCAT 59.571 50.000 13.00 0.00 0.00 3.55
3208 6851 1.819288 GAGAGACGTGATTCAGGACCA 59.181 52.381 13.00 0.00 0.00 4.02
3209 6852 2.096248 AGAGAGACGTGATTCAGGACC 58.904 52.381 13.00 4.78 0.00 4.46
3210 6853 3.013921 AGAGAGAGACGTGATTCAGGAC 58.986 50.000 13.00 7.00 0.00 3.85
3211 6854 3.275143 GAGAGAGAGACGTGATTCAGGA 58.725 50.000 13.00 0.00 0.00 3.86
3212 6855 2.357637 GGAGAGAGAGACGTGATTCAGG 59.642 54.545 0.00 4.86 0.00 3.86
3213 6856 2.357637 GGGAGAGAGAGACGTGATTCAG 59.642 54.545 0.00 0.00 0.00 3.02
3214 6857 2.025793 AGGGAGAGAGAGACGTGATTCA 60.026 50.000 0.00 0.00 0.00 2.57
3215 6858 2.650322 AGGGAGAGAGAGACGTGATTC 58.350 52.381 0.00 0.00 0.00 2.52
3216 6859 2.818751 AGGGAGAGAGAGACGTGATT 57.181 50.000 0.00 0.00 0.00 2.57
3217 6860 2.158726 GGTAGGGAGAGAGAGACGTGAT 60.159 54.545 0.00 0.00 0.00 3.06
3218 6861 1.209990 GGTAGGGAGAGAGAGACGTGA 59.790 57.143 0.00 0.00 0.00 4.35
3219 6862 1.210967 AGGTAGGGAGAGAGAGACGTG 59.789 57.143 0.00 0.00 0.00 4.49
3220 6863 1.587066 AGGTAGGGAGAGAGAGACGT 58.413 55.000 0.00 0.00 0.00 4.34
3221 6864 2.721425 AAGGTAGGGAGAGAGAGACG 57.279 55.000 0.00 0.00 0.00 4.18
3222 6865 3.951680 CTGAAAGGTAGGGAGAGAGAGAC 59.048 52.174 0.00 0.00 0.00 3.36
3223 6866 3.594232 ACTGAAAGGTAGGGAGAGAGAGA 59.406 47.826 0.00 0.00 39.30 3.10
3224 6867 3.976015 ACTGAAAGGTAGGGAGAGAGAG 58.024 50.000 0.00 0.00 39.30 3.20
3225 6868 4.405756 AACTGAAAGGTAGGGAGAGAGA 57.594 45.455 0.00 0.00 39.30 3.10
3226 6869 6.800072 ATAAACTGAAAGGTAGGGAGAGAG 57.200 41.667 0.00 0.00 39.30 3.20
3227 6870 7.147707 GCTTATAAACTGAAAGGTAGGGAGAGA 60.148 40.741 0.00 0.00 39.30 3.10
3228 6871 6.987404 GCTTATAAACTGAAAGGTAGGGAGAG 59.013 42.308 0.00 0.00 39.30 3.20
3229 6872 6.442564 TGCTTATAAACTGAAAGGTAGGGAGA 59.557 38.462 0.00 0.00 39.30 3.71
3230 6873 6.650120 TGCTTATAAACTGAAAGGTAGGGAG 58.350 40.000 0.00 0.00 39.30 4.30
3231 6874 6.630203 TGCTTATAAACTGAAAGGTAGGGA 57.370 37.500 0.00 0.00 39.30 4.20
3232 6875 6.486993 GGATGCTTATAAACTGAAAGGTAGGG 59.513 42.308 0.00 0.00 39.30 3.53
3233 6876 7.283329 AGGATGCTTATAAACTGAAAGGTAGG 58.717 38.462 0.00 0.00 39.30 3.18
3234 6877 7.169982 CGAGGATGCTTATAAACTGAAAGGTAG 59.830 40.741 0.00 0.00 39.30 3.18
3235 6878 6.984474 CGAGGATGCTTATAAACTGAAAGGTA 59.016 38.462 0.00 0.00 39.30 3.08
3236 6879 5.817816 CGAGGATGCTTATAAACTGAAAGGT 59.182 40.000 0.00 0.00 39.30 3.50
3260 6903 7.033185 ACTAAAATTCACGGCCATCAAAATAC 58.967 34.615 2.24 0.00 0.00 1.89
3261 6904 7.164230 ACTAAAATTCACGGCCATCAAAATA 57.836 32.000 2.24 0.00 0.00 1.40
3262 6905 6.036577 ACTAAAATTCACGGCCATCAAAAT 57.963 33.333 2.24 0.00 0.00 1.82
3264 6907 6.375736 TCATACTAAAATTCACGGCCATCAAA 59.624 34.615 2.24 0.00 0.00 2.69
3267 6910 5.527582 ACTCATACTAAAATTCACGGCCATC 59.472 40.000 2.24 0.00 0.00 3.51
3268 6911 5.437060 ACTCATACTAAAATTCACGGCCAT 58.563 37.500 2.24 0.00 0.00 4.40
3269 6912 4.839121 ACTCATACTAAAATTCACGGCCA 58.161 39.130 2.24 0.00 0.00 5.36
3272 6915 8.335356 CCACATAACTCATACTAAAATTCACGG 58.665 37.037 0.00 0.00 0.00 4.94
3274 6917 7.850982 CGCCACATAACTCATACTAAAATTCAC 59.149 37.037 0.00 0.00 0.00 3.18
3275 6918 7.766738 TCGCCACATAACTCATACTAAAATTCA 59.233 33.333 0.00 0.00 0.00 2.57
3276 6919 8.138365 TCGCCACATAACTCATACTAAAATTC 57.862 34.615 0.00 0.00 0.00 2.17
3277 6920 8.395633 GTTCGCCACATAACTCATACTAAAATT 58.604 33.333 0.00 0.00 0.00 1.82
3278 6921 7.551262 TGTTCGCCACATAACTCATACTAAAAT 59.449 33.333 0.00 0.00 0.00 1.82
3279 6922 6.874664 TGTTCGCCACATAACTCATACTAAAA 59.125 34.615 0.00 0.00 0.00 1.52
3281 6924 5.968254 TGTTCGCCACATAACTCATACTAA 58.032 37.500 0.00 0.00 0.00 2.24
3282 6925 5.585820 TGTTCGCCACATAACTCATACTA 57.414 39.130 0.00 0.00 0.00 1.82
3283 6926 4.465632 TGTTCGCCACATAACTCATACT 57.534 40.909 0.00 0.00 0.00 2.12
3284 6927 5.064707 ACAATGTTCGCCACATAACTCATAC 59.935 40.000 0.99 0.00 46.23 2.39
3285 6928 5.064579 CACAATGTTCGCCACATAACTCATA 59.935 40.000 0.99 0.00 46.23 2.15
3286 6929 4.009675 ACAATGTTCGCCACATAACTCAT 58.990 39.130 0.99 0.00 46.23 2.90
3300 6955 7.448748 ACTCTAAAATGGTACCACAATGTTC 57.551 36.000 19.09 0.00 0.00 3.18
3303 6958 7.447374 TGAACTCTAAAATGGTACCACAATG 57.553 36.000 19.09 7.06 0.00 2.82
3360 7080 6.457355 CCAAAAATCATCACATTTGAGGTCA 58.543 36.000 0.00 0.00 34.98 4.02
3419 7139 2.863809 ACAGCCACGAGGAATTTTCTT 58.136 42.857 1.86 0.00 36.89 2.52
3461 7181 2.159572 CCGGGCTTTATTCGACAACTTG 60.160 50.000 0.00 0.00 0.00 3.16
3466 7186 2.557317 GATTCCGGGCTTTATTCGACA 58.443 47.619 0.00 0.00 0.00 4.35
3467 7187 1.871676 GGATTCCGGGCTTTATTCGAC 59.128 52.381 0.00 0.00 0.00 4.20
3484 7204 2.867624 CATCATTTCCCATCCACGGAT 58.132 47.619 0.00 0.00 34.81 4.18
3505 7261 7.169308 ACAAACTGTACGAGAAATCACTAACAG 59.831 37.037 0.00 0.00 39.14 3.16
3506 7262 6.982141 ACAAACTGTACGAGAAATCACTAACA 59.018 34.615 0.00 0.00 0.00 2.41
3507 7263 7.404139 ACAAACTGTACGAGAAATCACTAAC 57.596 36.000 0.00 0.00 0.00 2.34
3508 7264 7.042321 CCAACAAACTGTACGAGAAATCACTAA 60.042 37.037 0.00 0.00 0.00 2.24
3509 7265 6.422701 CCAACAAACTGTACGAGAAATCACTA 59.577 38.462 0.00 0.00 0.00 2.74
3510 7266 5.236478 CCAACAAACTGTACGAGAAATCACT 59.764 40.000 0.00 0.00 0.00 3.41
3511 7267 5.440685 CCAACAAACTGTACGAGAAATCAC 58.559 41.667 0.00 0.00 0.00 3.06
3512 7268 4.513692 CCCAACAAACTGTACGAGAAATCA 59.486 41.667 0.00 0.00 0.00 2.57
3513 7269 4.612939 GCCCAACAAACTGTACGAGAAATC 60.613 45.833 0.00 0.00 0.00 2.17
3514 7270 3.252458 GCCCAACAAACTGTACGAGAAAT 59.748 43.478 0.00 0.00 0.00 2.17
3515 7271 2.614983 GCCCAACAAACTGTACGAGAAA 59.385 45.455 0.00 0.00 0.00 2.52
3516 7272 2.215196 GCCCAACAAACTGTACGAGAA 58.785 47.619 0.00 0.00 0.00 2.87
3517 7273 1.139256 TGCCCAACAAACTGTACGAGA 59.861 47.619 0.00 0.00 0.00 4.04
3518 7274 1.588674 TGCCCAACAAACTGTACGAG 58.411 50.000 0.00 0.00 0.00 4.18
3519 7275 1.671845 GTTGCCCAACAAACTGTACGA 59.328 47.619 6.29 0.00 40.82 3.43
3520 7276 1.673920 AGTTGCCCAACAAACTGTACG 59.326 47.619 13.08 0.00 43.47 3.67
3521 7277 3.793797 AAGTTGCCCAACAAACTGTAC 57.206 42.857 13.08 0.00 43.47 2.90
3522 7278 4.810191 AAAAGTTGCCCAACAAACTGTA 57.190 36.364 13.08 0.00 43.47 2.74
3523 7279 3.694043 AAAAGTTGCCCAACAAACTGT 57.306 38.095 13.08 0.00 43.47 3.55
3524 7280 6.744112 TCTATAAAAGTTGCCCAACAAACTG 58.256 36.000 13.08 0.00 43.47 3.16
3525 7281 6.549736 ACTCTATAAAAGTTGCCCAACAAACT 59.450 34.615 13.08 0.00 43.47 2.66
3526 7282 6.745116 ACTCTATAAAAGTTGCCCAACAAAC 58.255 36.000 13.08 0.00 43.47 2.93
3527 7283 6.969993 ACTCTATAAAAGTTGCCCAACAAA 57.030 33.333 13.08 0.00 43.47 2.83
3528 7284 7.389607 GTCTACTCTATAAAAGTTGCCCAACAA 59.610 37.037 13.08 0.00 43.47 2.83
3529 7285 6.877322 GTCTACTCTATAAAAGTTGCCCAACA 59.123 38.462 13.08 0.00 43.47 3.33
3530 7286 6.877322 TGTCTACTCTATAAAAGTTGCCCAAC 59.123 38.462 3.01 3.01 41.45 3.77
3531 7287 7.011499 TGTCTACTCTATAAAAGTTGCCCAA 57.989 36.000 0.00 0.00 0.00 4.12
3532 7288 6.614694 TGTCTACTCTATAAAAGTTGCCCA 57.385 37.500 0.00 0.00 0.00 5.36
3533 7289 7.467403 GCAATGTCTACTCTATAAAAGTTGCCC 60.467 40.741 0.00 0.00 0.00 5.36
3534 7290 7.065803 TGCAATGTCTACTCTATAAAAGTTGCC 59.934 37.037 0.00 0.00 0.00 4.52
3535 7291 7.974675 TGCAATGTCTACTCTATAAAAGTTGC 58.025 34.615 0.00 0.00 0.00 4.17
3538 7294 9.113838 CCAATGCAATGTCTACTCTATAAAAGT 57.886 33.333 0.21 0.00 0.00 2.66
3539 7295 9.330063 TCCAATGCAATGTCTACTCTATAAAAG 57.670 33.333 0.21 0.00 0.00 2.27
3540 7296 9.330063 CTCCAATGCAATGTCTACTCTATAAAA 57.670 33.333 0.21 0.00 0.00 1.52
3541 7297 7.442364 GCTCCAATGCAATGTCTACTCTATAAA 59.558 37.037 0.21 0.00 0.00 1.40
3542 7298 6.931281 GCTCCAATGCAATGTCTACTCTATAA 59.069 38.462 0.21 0.00 0.00 0.98
3543 7299 6.041979 TGCTCCAATGCAATGTCTACTCTATA 59.958 38.462 0.21 0.00 40.29 1.31
3544 7300 5.163269 TGCTCCAATGCAATGTCTACTCTAT 60.163 40.000 0.21 0.00 40.29 1.98
3545 7301 4.162131 TGCTCCAATGCAATGTCTACTCTA 59.838 41.667 0.21 0.00 40.29 2.43
3546 7302 3.054875 TGCTCCAATGCAATGTCTACTCT 60.055 43.478 0.21 0.00 40.29 3.24
3547 7303 3.064545 GTGCTCCAATGCAATGTCTACTC 59.935 47.826 0.21 0.00 45.12 2.59
3548 7304 3.012518 GTGCTCCAATGCAATGTCTACT 58.987 45.455 0.21 0.00 45.12 2.57
3549 7305 2.098117 GGTGCTCCAATGCAATGTCTAC 59.902 50.000 0.21 0.00 45.12 2.59
3550 7306 2.368439 GGTGCTCCAATGCAATGTCTA 58.632 47.619 0.21 0.00 45.12 2.59
3551 7307 1.180029 GGTGCTCCAATGCAATGTCT 58.820 50.000 0.21 0.00 45.12 3.41
3552 7308 0.174162 GGGTGCTCCAATGCAATGTC 59.826 55.000 7.20 0.00 45.12 3.06
3553 7309 0.542467 TGGGTGCTCCAATGCAATGT 60.542 50.000 7.20 0.00 45.12 2.71
3554 7310 2.278849 TGGGTGCTCCAATGCAATG 58.721 52.632 7.20 0.00 45.12 2.82
3555 7311 4.870069 TGGGTGCTCCAATGCAAT 57.130 50.000 7.20 0.00 45.12 3.56
3562 7318 1.827789 GTGCAAGTTGGGTGCTCCA 60.828 57.895 7.20 0.85 45.43 3.86
3563 7319 2.564721 GGTGCAAGTTGGGTGCTCC 61.565 63.158 4.75 0.00 45.38 4.70
3564 7320 1.518903 GAGGTGCAAGTTGGGTGCTC 61.519 60.000 4.75 0.00 42.69 4.26
3565 7321 1.529244 GAGGTGCAAGTTGGGTGCT 60.529 57.895 4.75 0.00 42.69 4.40
3566 7322 1.529244 AGAGGTGCAAGTTGGGTGC 60.529 57.895 4.75 0.00 42.55 5.01
3567 7323 2.334307 CAGAGGTGCAAGTTGGGTG 58.666 57.895 4.75 0.00 0.00 4.61
3568 7324 4.907457 CAGAGGTGCAAGTTGGGT 57.093 55.556 4.75 0.00 0.00 4.51
3578 7334 1.000283 GATAGGATCACGGCAGAGGTG 60.000 57.143 0.00 0.00 36.74 4.00
3579 7335 1.133325 AGATAGGATCACGGCAGAGGT 60.133 52.381 0.00 0.00 0.00 3.85
3580 7336 1.543802 GAGATAGGATCACGGCAGAGG 59.456 57.143 0.00 0.00 0.00 3.69
3581 7337 2.487762 GAGAGATAGGATCACGGCAGAG 59.512 54.545 0.00 0.00 0.00 3.35
3582 7338 2.509569 GAGAGATAGGATCACGGCAGA 58.490 52.381 0.00 0.00 0.00 4.26
3583 7339 1.198867 CGAGAGATAGGATCACGGCAG 59.801 57.143 0.00 0.00 0.00 4.85
3584 7340 1.239347 CGAGAGATAGGATCACGGCA 58.761 55.000 0.00 0.00 0.00 5.69
3585 7341 0.523966 CCGAGAGATAGGATCACGGC 59.476 60.000 0.00 0.00 36.56 5.68
3586 7342 1.169577 CCCGAGAGATAGGATCACGG 58.830 60.000 5.06 5.06 40.01 4.94
3587 7343 1.807742 GTCCCGAGAGATAGGATCACG 59.192 57.143 0.00 0.00 30.92 4.35
3588 7344 3.149005 AGTCCCGAGAGATAGGATCAC 57.851 52.381 0.00 0.00 30.92 3.06
3589 7345 3.885976 AAGTCCCGAGAGATAGGATCA 57.114 47.619 0.00 0.00 30.92 2.92
3590 7346 3.892588 ACAAAGTCCCGAGAGATAGGATC 59.107 47.826 0.00 0.00 30.92 3.36
3591 7347 3.892588 GACAAAGTCCCGAGAGATAGGAT 59.107 47.826 0.00 0.00 30.92 3.24
3592 7348 3.288964 GACAAAGTCCCGAGAGATAGGA 58.711 50.000 0.00 0.00 0.00 2.94
3593 7349 3.024547 TGACAAAGTCCCGAGAGATAGG 58.975 50.000 0.00 0.00 0.00 2.57
3594 7350 3.697045 AGTGACAAAGTCCCGAGAGATAG 59.303 47.826 0.00 0.00 0.00 2.08
3595 7351 3.698289 AGTGACAAAGTCCCGAGAGATA 58.302 45.455 0.00 0.00 0.00 1.98
3596 7352 2.530701 AGTGACAAAGTCCCGAGAGAT 58.469 47.619 0.00 0.00 0.00 2.75
3597 7353 1.996798 AGTGACAAAGTCCCGAGAGA 58.003 50.000 0.00 0.00 0.00 3.10
3598 7354 3.256136 ACTTAGTGACAAAGTCCCGAGAG 59.744 47.826 0.00 0.00 31.56 3.20
3599 7355 3.228453 ACTTAGTGACAAAGTCCCGAGA 58.772 45.455 0.00 0.00 31.56 4.04
3600 7356 3.662247 ACTTAGTGACAAAGTCCCGAG 57.338 47.619 0.00 0.00 31.56 4.63
3601 7357 3.243975 GGAACTTAGTGACAAAGTCCCGA 60.244 47.826 0.00 0.00 36.17 5.14
3602 7358 3.064931 GGAACTTAGTGACAAAGTCCCG 58.935 50.000 0.00 0.00 36.17 5.14
3603 7359 3.072622 AGGGAACTTAGTGACAAAGTCCC 59.927 47.826 7.72 7.72 40.68 4.46
3604 7360 4.040584 AGAGGGAACTTAGTGACAAAGTCC 59.959 45.833 0.00 0.00 44.43 3.85
3605 7361 5.011227 AGAGAGGGAACTTAGTGACAAAGTC 59.989 44.000 0.00 0.00 44.43 3.01
3606 7362 4.902448 AGAGAGGGAACTTAGTGACAAAGT 59.098 41.667 0.00 0.00 44.43 2.66
3607 7363 5.245075 AGAGAGAGGGAACTTAGTGACAAAG 59.755 44.000 0.00 0.00 44.43 2.77
3608 7364 5.011125 CAGAGAGAGGGAACTTAGTGACAAA 59.989 44.000 0.00 0.00 44.43 2.83
3632 7388 6.157211 CGTAGGAATGTCCATATAGACCAAC 58.843 44.000 0.00 0.00 39.61 3.77
3663 7419 7.247728 TCAGCATTCATATTTAAACCGTCAAC 58.752 34.615 0.00 0.00 0.00 3.18
3671 7427 7.716799 ACCAACCTCAGCATTCATATTTAAA 57.283 32.000 0.00 0.00 0.00 1.52
3673 7429 7.573710 AGTACCAACCTCAGCATTCATATTTA 58.426 34.615 0.00 0.00 0.00 1.40
3676 7432 5.636903 AGTACCAACCTCAGCATTCATAT 57.363 39.130 0.00 0.00 0.00 1.78
3695 7451 6.103997 CGCCCTTTTTCTCACTACATTAGTA 58.896 40.000 0.00 0.00 37.23 1.82
3699 7455 2.488153 GCGCCCTTTTTCTCACTACATT 59.512 45.455 0.00 0.00 0.00 2.71
3721 7477 3.825585 TGCTGGAATTTACATGTGAGCAA 59.174 39.130 9.11 0.00 32.47 3.91
3880 7844 0.595588 TGCAAATAGCCACACCGTTG 59.404 50.000 0.00 0.00 44.83 4.10
3977 7941 9.502091 TTTCTAACATATTTAGCACACTTCAGT 57.498 29.630 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.