Multiple sequence alignment - TraesCS7D01G488900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G488900 chr7D 100.000 3657 0 0 1 3657 598667262 598663606 0.000000e+00 6754.0
1 TraesCS7D01G488900 chr7D 77.735 521 68 24 21 523 599462172 599461682 3.600000e-70 276.0
2 TraesCS7D01G488900 chr7D 92.941 85 4 1 651 735 598585737 598585819 4.960000e-24 122.0
3 TraesCS7D01G488900 chr7B 86.216 2735 244 65 1 2670 678284235 678281569 0.000000e+00 2839.0
4 TraesCS7D01G488900 chr7B 84.926 471 45 14 2848 3303 678281392 678280933 1.550000e-123 453.0
5 TraesCS7D01G488900 chr7B 76.977 430 63 21 21 426 677922294 677922711 2.860000e-51 213.0
6 TraesCS7D01G488900 chr7B 92.754 69 5 0 2149 2217 678282203 678282135 2.320000e-17 100.0
7 TraesCS7D01G488900 chr7A 86.913 2598 224 47 124 2665 691260944 691258407 0.000000e+00 2808.0
8 TraesCS7D01G488900 chr7A 83.684 190 15 8 3095 3279 691257920 691257742 8.120000e-37 165.0
9 TraesCS7D01G488900 chr7A 86.232 138 12 1 103 240 691266144 691266014 3.810000e-30 143.0
10 TraesCS7D01G488900 chr7A 90.909 77 5 1 659 735 691059603 691059677 6.460000e-18 102.0
11 TraesCS7D01G488900 chr7A 94.828 58 3 0 2149 2206 691259023 691258966 1.400000e-14 91.6
12 TraesCS7D01G488900 chr2D 82.639 144 16 3 27 164 47682757 47682897 6.420000e-23 119.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G488900 chr7D 598663606 598667262 3656 True 6754.000000 6754 100.000000 1 3657 1 chr7D.!!$R1 3656
1 TraesCS7D01G488900 chr7B 678280933 678284235 3302 True 1130.666667 2839 87.965333 1 3303 3 chr7B.!!$R1 3302
2 TraesCS7D01G488900 chr7A 691257742 691260944 3202 True 1021.533333 2808 88.475000 124 3279 3 chr7A.!!$R2 3155

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
942 1010 0.391661 ACGCATACAAGGCACAGGAG 60.392 55.0 0.0 0.0 0.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2776 2949 0.095245 CACGCGATTCTGCAACGATT 59.905 50.0 15.93 0.0 34.15 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 9.073475 AGATAGATGTATGGAGAACAGAGTAAC 57.927 37.037 0.00 0.00 0.00 2.50
101 104 2.670934 CCAGTGGCACCAGCAGAC 60.671 66.667 15.27 0.00 44.61 3.51
139 142 4.767928 AGAACTCTAGAACGATTCTGTGGT 59.232 41.667 9.58 4.20 40.94 4.16
213 221 2.281484 TGGCCAAGAACTCCACGC 60.281 61.111 0.61 0.00 0.00 5.34
249 257 3.033184 CAGCCGCACTTGCTTTGA 58.967 55.556 0.00 0.00 36.81 2.69
254 262 0.454957 CCGCACTTGCTTTGATTCCG 60.455 55.000 0.00 0.00 39.32 4.30
255 263 1.067199 CGCACTTGCTTTGATTCCGC 61.067 55.000 0.00 0.00 39.32 5.54
275 283 2.034879 CGGTGCACCTTGCCTACTG 61.035 63.158 32.28 10.68 44.23 2.74
295 303 2.225467 GCAGAATCCCAGCCTGTAATC 58.775 52.381 0.00 0.00 0.00 1.75
301 309 3.366052 TCCCAGCCTGTAATCCTTTTC 57.634 47.619 0.00 0.00 0.00 2.29
302 310 2.025321 TCCCAGCCTGTAATCCTTTTCC 60.025 50.000 0.00 0.00 0.00 3.13
303 311 2.024941 CCCAGCCTGTAATCCTTTTCCT 60.025 50.000 0.00 0.00 0.00 3.36
309 317 7.559897 CCAGCCTGTAATCCTTTTCCTTTAATA 59.440 37.037 0.00 0.00 0.00 0.98
310 318 9.136323 CAGCCTGTAATCCTTTTCCTTTAATAT 57.864 33.333 0.00 0.00 0.00 1.28
356 373 8.547069 GCTTTTATCATTCTTAGCTACTGTCAG 58.453 37.037 0.00 0.00 0.00 3.51
361 378 7.939784 TCATTCTTAGCTACTGTCAGAGTTA 57.060 36.000 6.91 0.00 35.96 2.24
362 379 7.763356 TCATTCTTAGCTACTGTCAGAGTTAC 58.237 38.462 6.91 0.00 35.96 2.50
363 380 7.393515 TCATTCTTAGCTACTGTCAGAGTTACA 59.606 37.037 6.91 0.00 35.96 2.41
366 383 6.940867 TCTTAGCTACTGTCAGAGTTACAGAA 59.059 38.462 6.91 0.00 45.89 3.02
367 384 7.612244 TCTTAGCTACTGTCAGAGTTACAGAAT 59.388 37.037 6.91 0.00 45.89 2.40
368 385 5.960113 AGCTACTGTCAGAGTTACAGAATG 58.040 41.667 6.91 1.67 45.89 2.67
369 386 5.478679 AGCTACTGTCAGAGTTACAGAATGT 59.521 40.000 6.91 0.00 45.89 2.71
398 415 6.546403 AGCATCAGCATCAAATGTATTCTTCT 59.454 34.615 0.00 0.00 45.49 2.85
404 421 5.970023 GCATCAAATGTATTCTTCTGCTCAC 59.030 40.000 0.00 0.00 0.00 3.51
414 431 5.679734 TTCTTCTGCTCACATGAAAACTC 57.320 39.130 0.00 0.00 0.00 3.01
421 438 4.821260 TGCTCACATGAAAACTCTTTGCTA 59.179 37.500 0.00 0.00 0.00 3.49
423 440 5.049129 GCTCACATGAAAACTCTTTGCTAGT 60.049 40.000 0.00 0.00 0.00 2.57
431 448 4.837896 AACTCTTTGCTAGTTTTCCTGC 57.162 40.909 0.00 0.00 33.39 4.85
448 465 5.369409 TCCTGCATTCTTCAGATGAGATT 57.631 39.130 0.00 0.00 33.54 2.40
460 477 8.756927 TCTTCAGATGAGATTCAAACTAGATGT 58.243 33.333 0.00 0.00 0.00 3.06
466 483 9.809096 GATGAGATTCAAACTAGATGTACTTCA 57.191 33.333 11.02 0.97 0.00 3.02
496 513 8.771920 TTAGTTGTTACAGGACATACTTGATG 57.228 34.615 0.00 0.00 41.79 3.07
498 515 7.624549 AGTTGTTACAGGACATACTTGATGAT 58.375 34.615 0.00 0.00 39.06 2.45
501 518 6.756542 TGTTACAGGACATACTTGATGATTCG 59.243 38.462 0.00 0.00 39.06 3.34
531 552 7.041167 CCAAGTTCTTGCGATGATATATTGGAA 60.041 37.037 7.00 0.00 35.44 3.53
532 553 7.664082 AGTTCTTGCGATGATATATTGGAAG 57.336 36.000 0.00 0.00 33.69 3.46
533 554 6.148480 AGTTCTTGCGATGATATATTGGAAGC 59.852 38.462 0.00 0.00 32.81 3.86
534 555 5.550290 TCTTGCGATGATATATTGGAAGCA 58.450 37.500 0.00 0.00 32.81 3.91
535 556 5.640783 TCTTGCGATGATATATTGGAAGCAG 59.359 40.000 0.00 0.00 32.81 4.24
536 557 3.686241 TGCGATGATATATTGGAAGCAGC 59.314 43.478 0.00 0.00 0.00 5.25
537 558 3.686241 GCGATGATATATTGGAAGCAGCA 59.314 43.478 0.00 0.00 0.00 4.41
538 559 4.201792 GCGATGATATATTGGAAGCAGCAG 60.202 45.833 0.00 0.00 0.00 4.24
543 564 6.591001 TGATATATTGGAAGCAGCAGTTGTA 58.409 36.000 0.00 0.00 0.00 2.41
545 566 5.762825 ATATTGGAAGCAGCAGTTGTATG 57.237 39.130 0.00 0.00 0.00 2.39
546 567 2.566833 TGGAAGCAGCAGTTGTATGT 57.433 45.000 0.00 0.00 0.00 2.29
547 568 3.694043 TGGAAGCAGCAGTTGTATGTA 57.306 42.857 0.00 0.00 0.00 2.29
548 569 3.334691 TGGAAGCAGCAGTTGTATGTAC 58.665 45.455 0.00 0.00 0.00 2.90
549 570 3.007940 TGGAAGCAGCAGTTGTATGTACT 59.992 43.478 0.00 0.00 0.00 2.73
550 571 3.372206 GGAAGCAGCAGTTGTATGTACTG 59.628 47.826 0.00 0.00 44.55 2.74
551 572 3.685139 AGCAGCAGTTGTATGTACTGT 57.315 42.857 0.00 0.00 43.81 3.55
552 573 4.008074 AGCAGCAGTTGTATGTACTGTT 57.992 40.909 0.00 0.00 43.81 3.16
553 574 5.147330 AGCAGCAGTTGTATGTACTGTTA 57.853 39.130 0.00 0.00 43.81 2.41
554 575 5.171476 AGCAGCAGTTGTATGTACTGTTAG 58.829 41.667 0.00 0.00 43.81 2.34
555 576 5.047306 AGCAGCAGTTGTATGTACTGTTAGA 60.047 40.000 0.00 0.00 43.81 2.10
556 577 5.637810 GCAGCAGTTGTATGTACTGTTAGAA 59.362 40.000 0.00 0.00 43.81 2.10
557 578 6.183360 GCAGCAGTTGTATGTACTGTTAGAAG 60.183 42.308 0.00 0.00 43.81 2.85
558 579 5.869888 AGCAGTTGTATGTACTGTTAGAAGC 59.130 40.000 0.00 0.00 43.81 3.86
565 587 8.534333 TGTATGTACTGTTAGAAGCTGAAAAG 57.466 34.615 0.00 0.00 0.00 2.27
580 633 9.387123 GAAGCTGAAAAGTGTTTACTGAATTAG 57.613 33.333 0.00 0.00 37.19 1.73
590 643 9.236006 AGTGTTTACTGAATTAGATTGCAGAAT 57.764 29.630 0.00 0.00 35.34 2.40
605 658 7.501559 AGATTGCAGAATATTCAACATGCTACT 59.498 33.333 21.27 15.90 34.80 2.57
626 684 5.675538 ACTATGCTTACAGAGTCCATTTCC 58.324 41.667 0.00 0.00 45.03 3.13
627 685 4.574674 ATGCTTACAGAGTCCATTTCCA 57.425 40.909 0.00 0.00 0.00 3.53
628 686 3.942829 TGCTTACAGAGTCCATTTCCAG 58.057 45.455 0.00 0.00 0.00 3.86
629 687 2.680339 GCTTACAGAGTCCATTTCCAGC 59.320 50.000 0.00 0.00 0.00 4.85
647 705 1.479323 AGCCAGCGATGCATTTTCATT 59.521 42.857 0.00 0.00 0.00 2.57
649 707 2.480759 GCCAGCGATGCATTTTCATTCT 60.481 45.455 0.00 0.00 0.00 2.40
652 720 3.018856 AGCGATGCATTTTCATTCTGGA 58.981 40.909 0.00 0.00 0.00 3.86
676 744 3.430929 CCCAGTCTAGAAACTTCCATCCG 60.431 52.174 0.00 0.00 0.00 4.18
685 753 1.196012 ACTTCCATCCGGAACTCTCC 58.804 55.000 9.01 0.00 46.79 3.71
694 762 1.132643 CCGGAACTCTCCAGAAGTACG 59.867 57.143 0.00 0.00 42.58 3.67
902 970 3.769536 GTGCCACCAATACATTAAGCAC 58.230 45.455 0.00 0.00 42.06 4.40
932 1000 4.150980 GCGGCTATATAAACACGCATACAA 59.849 41.667 12.31 0.00 45.57 2.41
942 1010 0.391661 ACGCATACAAGGCACAGGAG 60.392 55.000 0.00 0.00 0.00 3.69
969 1037 4.080129 ACACCTCATCAGCAAAGACCATAT 60.080 41.667 0.00 0.00 0.00 1.78
970 1038 5.130975 ACACCTCATCAGCAAAGACCATATA 59.869 40.000 0.00 0.00 0.00 0.86
971 1039 6.183361 ACACCTCATCAGCAAAGACCATATAT 60.183 38.462 0.00 0.00 0.00 0.86
972 1040 7.016563 ACACCTCATCAGCAAAGACCATATATA 59.983 37.037 0.00 0.00 0.00 0.86
973 1041 7.332926 CACCTCATCAGCAAAGACCATATATAC 59.667 40.741 0.00 0.00 0.00 1.47
1055 1138 1.151221 TGGTGTCAATGGCAGCAGT 59.849 52.632 16.18 0.00 39.10 4.40
1113 1196 1.304134 GGGTTTAGGTGGTGGGCTG 60.304 63.158 0.00 0.00 0.00 4.85
1155 1250 4.851179 GGTGGATCGGGTTCGGCC 62.851 72.222 0.00 0.00 36.95 6.13
1156 1251 3.782443 GTGGATCGGGTTCGGCCT 61.782 66.667 0.00 0.00 37.43 5.19
1157 1252 3.467226 TGGATCGGGTTCGGCCTC 61.467 66.667 0.00 0.00 37.43 4.70
1158 1253 3.155167 GGATCGGGTTCGGCCTCT 61.155 66.667 0.00 0.00 37.43 3.69
1159 1254 2.107141 GATCGGGTTCGGCCTCTG 59.893 66.667 0.00 0.00 37.43 3.35
1160 1255 3.447025 GATCGGGTTCGGCCTCTGG 62.447 68.421 0.00 0.00 37.43 3.86
1162 1257 4.016706 CGGGTTCGGCCTCTGGTT 62.017 66.667 0.00 0.00 37.43 3.67
1163 1258 2.046217 GGGTTCGGCCTCTGGTTC 60.046 66.667 0.00 0.00 37.43 3.62
1164 1259 2.434359 GGTTCGGCCTCTGGTTCG 60.434 66.667 0.00 0.00 0.00 3.95
1165 1260 2.434359 GTTCGGCCTCTGGTTCGG 60.434 66.667 0.00 0.00 0.00 4.30
1194 1289 0.250124 CGGGTTACAGTGCTTGGTCA 60.250 55.000 0.00 0.00 0.00 4.02
1197 1292 0.875059 GTTACAGTGCTTGGTCAGGC 59.125 55.000 0.00 0.00 0.00 4.85
1287 1382 1.453669 CTCTGCTAATGGGGGCTCC 59.546 63.158 0.00 0.00 0.00 4.70
1407 1508 4.169696 TCGAATGGCGGGGCGAAT 62.170 61.111 0.00 0.00 41.33 3.34
1464 1565 4.452733 GGTTCCGGAGTGGGCTCG 62.453 72.222 3.34 0.00 42.53 5.03
1465 1566 4.452733 GTTCCGGAGTGGGCTCGG 62.453 72.222 3.34 0.00 42.53 4.63
1469 1570 4.452733 CGGAGTGGGCTCGGGTTC 62.453 72.222 0.00 0.00 42.53 3.62
1512 1619 3.630311 GGTCTAGTGGAGGTTCATACCCT 60.630 52.174 0.00 0.00 46.28 4.34
1551 1658 0.461339 CTGGTATTGGGTCGGGTTCG 60.461 60.000 0.00 0.00 37.82 3.95
1566 1673 0.529378 GTTCGGGTGTATCGTCTGGT 59.471 55.000 0.00 0.00 0.00 4.00
1625 1732 0.036388 TCATCTTGTGGTTCCGGCTC 60.036 55.000 0.00 0.00 0.00 4.70
1657 1770 1.519455 GGTGGCTCCTCGTCGAATG 60.519 63.158 0.00 0.00 0.00 2.67
1678 1791 1.582610 GAATTCGGGCGCTGGTTCAA 61.583 55.000 7.64 0.00 0.00 2.69
1689 1802 1.544314 GCTGGTTCAAGCTCCAACTCT 60.544 52.381 7.48 0.00 40.20 3.24
1692 1805 3.740115 TGGTTCAAGCTCCAACTCTTAC 58.260 45.455 7.48 0.00 0.00 2.34
1773 1886 3.055240 GCTCAGGATATGATTCCTCTGGG 60.055 52.174 0.00 0.00 44.54 4.45
1776 1889 4.140591 TCAGGATATGATTCCTCTGGGTCT 60.141 45.833 0.00 0.00 44.54 3.85
1819 1932 2.036733 TCTGGGTCAGGTTAGTGTTTCG 59.963 50.000 0.00 0.00 31.51 3.46
1820 1933 1.764134 TGGGTCAGGTTAGTGTTTCGT 59.236 47.619 0.00 0.00 0.00 3.85
1823 1936 2.798847 GGTCAGGTTAGTGTTTCGTGTC 59.201 50.000 0.00 0.00 0.00 3.67
1824 1937 3.450578 GTCAGGTTAGTGTTTCGTGTCA 58.549 45.455 0.00 0.00 0.00 3.58
1838 1951 5.365403 TTCGTGTCATGTTTGGTTATTCC 57.635 39.130 0.00 0.00 0.00 3.01
1855 1968 6.456988 GGTTATTCCTCTCGTTGCTAACATTG 60.457 42.308 0.00 0.00 0.00 2.82
1860 1973 1.459209 CTCGTTGCTAACATTGACGCA 59.541 47.619 0.00 0.00 34.04 5.24
1937 2052 1.635663 GGATCACGTGGCGGTTCAAG 61.636 60.000 17.00 0.00 0.00 3.02
1953 2068 0.676151 CAAGCTCCAACTCTGGCTCC 60.676 60.000 0.00 0.00 43.17 4.70
1955 2070 0.913451 AGCTCCAACTCTGGCTCCAT 60.913 55.000 0.00 0.00 43.17 3.41
1998 2113 3.865929 CTCTGGTGCGTTCGGTGCT 62.866 63.158 0.00 0.00 0.00 4.40
2004 2119 4.090057 GCGTTCGGTGCTTCAGGC 62.090 66.667 0.00 0.00 42.22 4.85
2019 2134 1.081892 CAGGCAGTGGATCAAACTCG 58.918 55.000 0.00 0.00 0.00 4.18
2037 2152 1.635663 CGATGTCGGGTGCAAACTCC 61.636 60.000 0.00 0.00 35.37 3.85
2128 2243 0.390603 TATGTCGGGTGCAAACTCGG 60.391 55.000 0.00 0.00 0.00 4.63
2129 2244 2.029964 GTCGGGTGCAAACTCGGA 59.970 61.111 0.00 0.00 0.00 4.55
2130 2245 1.375523 GTCGGGTGCAAACTCGGAT 60.376 57.895 0.00 0.00 0.00 4.18
2131 2246 1.375396 TCGGGTGCAAACTCGGATG 60.375 57.895 0.00 0.00 0.00 3.51
2132 2247 2.877691 GGGTGCAAACTCGGATGC 59.122 61.111 0.00 0.00 42.86 3.91
2135 2250 1.503542 GTGCAAACTCGGATGCTGG 59.496 57.895 3.97 0.00 42.97 4.85
2151 2266 2.811317 GGTGCTGGTTCGAGCTCG 60.811 66.667 30.03 30.03 39.90 5.03
2208 2323 0.764890 TGTCTGGTTCAGGTTCAGGG 59.235 55.000 0.00 0.00 31.51 4.45
2212 2327 1.142870 CTGGTTCAGGTTCAGGGTCAA 59.857 52.381 0.00 0.00 0.00 3.18
2255 2382 5.622460 GCTCAGGTTCGATCTTTACTTCTCA 60.622 44.000 0.00 0.00 0.00 3.27
2256 2383 6.340962 TCAGGTTCGATCTTTACTTCTCAA 57.659 37.500 0.00 0.00 0.00 3.02
2257 2384 6.390721 TCAGGTTCGATCTTTACTTCTCAAG 58.609 40.000 0.00 0.00 0.00 3.02
2258 2385 6.015350 TCAGGTTCGATCTTTACTTCTCAAGT 60.015 38.462 0.00 0.00 45.40 3.16
2260 2387 6.869388 AGGTTCGATCTTTACTTCTCAAGTTC 59.131 38.462 0.00 0.00 42.81 3.01
2265 2392 7.971168 TCGATCTTTACTTCTCAAGTTCTCATC 59.029 37.037 0.00 0.00 42.81 2.92
2267 2394 9.598517 GATCTTTACTTCTCAAGTTCTCATCAT 57.401 33.333 0.00 0.00 42.81 2.45
2268 2395 8.994429 TCTTTACTTCTCAAGTTCTCATCATC 57.006 34.615 0.00 0.00 42.81 2.92
2270 2397 9.381033 CTTTACTTCTCAAGTTCTCATCATCAT 57.619 33.333 0.00 0.00 42.81 2.45
2271 2398 8.939201 TTACTTCTCAAGTTCTCATCATCATC 57.061 34.615 0.00 0.00 42.81 2.92
2286 2413 8.797350 TCATCATCATCACTTTACTCAATTGT 57.203 30.769 5.13 0.00 0.00 2.71
2287 2414 8.671028 TCATCATCATCACTTTACTCAATTGTG 58.329 33.333 5.13 5.59 0.00 3.33
2292 2419 5.090652 TCACTTTACTCAATTGTGCGTTC 57.909 39.130 5.13 0.00 0.00 3.95
2301 2428 5.357878 ACTCAATTGTGCGTTCATATGGAAT 59.642 36.000 5.13 0.00 37.93 3.01
2304 2431 7.584108 TCAATTGTGCGTTCATATGGAATATC 58.416 34.615 5.13 0.00 37.44 1.63
2305 2432 5.940192 TTGTGCGTTCATATGGAATATCC 57.060 39.130 2.13 0.00 37.44 2.59
2342 2469 0.183014 TCCTACGTTTGCAACCCCAA 59.817 50.000 0.00 0.00 0.00 4.12
2344 2471 1.269361 CCTACGTTTGCAACCCCAAAC 60.269 52.381 0.00 7.50 46.82 2.93
2355 2482 5.119694 TGCAACCCCAAACAAAGTTTTATC 58.880 37.500 0.00 0.00 0.00 1.75
2410 2538 5.354513 GCTTGATTTTTCTACAGGGTCTACC 59.645 44.000 0.00 0.00 40.67 3.18
2423 2551 2.629051 GGTCTACCGGATTTGGTTCTG 58.371 52.381 9.46 0.00 43.56 3.02
2655 2783 2.756400 CTGGGGCAAGCACCACTA 59.244 61.111 12.92 0.00 45.95 2.74
2660 2788 1.623311 GGGGCAAGCACCACTAAAAAT 59.377 47.619 8.81 0.00 39.85 1.82
2667 2795 4.192429 AGCACCACTAAAAATTGATGCC 57.808 40.909 0.00 0.00 32.19 4.40
2669 2797 3.055891 GCACCACTAAAAATTGATGCCCT 60.056 43.478 0.00 0.00 0.00 5.19
2671 2799 5.550290 CACCACTAAAAATTGATGCCCTTT 58.450 37.500 0.00 0.00 0.00 3.11
2672 2800 5.997129 CACCACTAAAAATTGATGCCCTTTT 59.003 36.000 0.00 0.00 0.00 2.27
2673 2801 5.997129 ACCACTAAAAATTGATGCCCTTTTG 59.003 36.000 0.00 0.00 0.00 2.44
2674 2802 5.997129 CCACTAAAAATTGATGCCCTTTTGT 59.003 36.000 0.00 0.00 0.00 2.83
2675 2803 6.073112 CCACTAAAAATTGATGCCCTTTTGTG 60.073 38.462 0.00 0.00 0.00 3.33
2709 2873 5.572896 CGTGATATTTTCCTTTGTTTCTGGC 59.427 40.000 0.00 0.00 0.00 4.85
2747 2919 5.950758 TGCACCATTGTATTTTACGTCTT 57.049 34.783 0.00 0.00 0.00 3.01
2776 2949 4.523813 GAGTTGCGTTTTCTTTCGAATGA 58.476 39.130 9.50 9.50 0.00 2.57
2791 2965 3.275020 CGAATGAATCGTTGCAGAATCG 58.725 45.455 0.00 0.00 46.52 3.34
2792 2966 2.744787 ATGAATCGTTGCAGAATCGC 57.255 45.000 0.00 0.00 0.00 4.58
2797 2971 1.507713 CGTTGCAGAATCGCGTGTG 60.508 57.895 5.77 0.00 33.35 3.82
2799 2973 0.041312 GTTGCAGAATCGCGTGTGTT 60.041 50.000 5.77 0.00 33.35 3.32
2801 2975 0.599991 TGCAGAATCGCGTGTGTTCT 60.600 50.000 5.77 9.29 32.70 3.01
2802 2976 0.512952 GCAGAATCGCGTGTGTTCTT 59.487 50.000 5.77 0.00 30.19 2.52
2803 2977 1.722751 GCAGAATCGCGTGTGTTCTTG 60.723 52.381 5.77 8.19 30.19 3.02
2804 2978 1.792367 CAGAATCGCGTGTGTTCTTGA 59.208 47.619 5.77 0.00 30.19 3.02
2807 2981 3.311322 AGAATCGCGTGTGTTCTTGAAAA 59.689 39.130 5.77 0.00 0.00 2.29
2851 3025 6.720012 TTTTTCTTTTTGAACACAGAAGCC 57.280 33.333 0.00 0.00 33.88 4.35
2852 3026 5.398603 TTTCTTTTTGAACACAGAAGCCA 57.601 34.783 0.00 0.00 33.88 4.75
2853 3027 5.596836 TTCTTTTTGAACACAGAAGCCAT 57.403 34.783 0.00 0.00 0.00 4.40
2854 3028 4.935702 TCTTTTTGAACACAGAAGCCATG 58.064 39.130 0.00 0.00 0.00 3.66
2855 3029 3.731652 TTTTGAACACAGAAGCCATGG 57.268 42.857 7.63 7.63 0.00 3.66
2863 3037 2.886523 CACAGAAGCCATGGAAGTTGAA 59.113 45.455 18.40 0.00 0.00 2.69
2865 3039 2.886523 CAGAAGCCATGGAAGTTGAACA 59.113 45.455 18.40 0.00 0.00 3.18
2872 3046 5.070847 AGCCATGGAAGTTGAACAAAATTCT 59.929 36.000 18.40 0.00 41.52 2.40
2876 3050 6.443934 TGGAAGTTGAACAAAATTCTTCGA 57.556 33.333 0.00 0.00 41.52 3.71
2886 3060 3.521524 AAATTCTTCGACAAGTCACGC 57.478 42.857 0.72 0.00 0.00 5.34
2924 3098 2.014064 TTGTCGGGTCGTCGAAACCA 62.014 55.000 17.44 0.00 41.05 3.67
2949 3127 1.070601 TGCTTGAGCTCTTGTGCTACA 59.929 47.619 16.19 0.00 44.17 2.74
2955 3133 4.582869 TGAGCTCTTGTGCTACATGATTT 58.417 39.130 16.19 0.00 44.17 2.17
2958 3136 3.065925 GCTCTTGTGCTACATGATTTCCC 59.934 47.826 0.00 0.00 32.80 3.97
2965 3143 2.299503 TACATGATTTCCCGCCGCGA 62.300 55.000 15.93 0.00 0.00 5.87
2966 3144 2.895372 ATGATTTCCCGCCGCGAC 60.895 61.111 15.93 0.00 0.00 5.19
3016 3198 4.602259 GATCCGGCCGGCGAATGA 62.602 66.667 39.89 22.17 34.68 2.57
3094 3342 2.176889 GGGCACGGAAGCTATCCTATA 58.823 52.381 11.56 0.00 46.98 1.31
3095 3343 2.766828 GGGCACGGAAGCTATCCTATAT 59.233 50.000 11.56 0.00 46.98 0.86
3102 3350 4.294347 GGAAGCTATCCTATATCTGGGCT 58.706 47.826 7.46 0.00 45.56 5.19
3103 3351 4.343814 GGAAGCTATCCTATATCTGGGCTC 59.656 50.000 7.46 0.00 45.56 4.70
3106 3354 1.490574 ATCCTATATCTGGGCTCGCC 58.509 55.000 0.00 0.00 0.00 5.54
3158 3406 3.723348 GCACAAGACGGGCGTTCC 61.723 66.667 0.00 0.00 0.00 3.62
3159 3407 2.030562 CACAAGACGGGCGTTCCT 59.969 61.111 0.00 0.00 0.00 3.36
3160 3408 1.597027 CACAAGACGGGCGTTCCTT 60.597 57.895 0.00 0.00 0.00 3.36
3161 3409 1.301479 ACAAGACGGGCGTTCCTTC 60.301 57.895 0.00 0.00 34.29 3.46
3176 3424 1.081108 CTTCCGGCGATCGATCCTC 60.081 63.158 21.57 11.25 42.43 3.71
3179 3427 2.721859 CGGCGATCGATCCTCACA 59.278 61.111 21.57 0.00 42.43 3.58
3218 3470 2.470286 GTTTCGTTGCTCTCGGCG 59.530 61.111 0.00 0.00 45.43 6.46
3303 3555 4.876828 CGCCCGGCCGTCGAATTA 62.877 66.667 26.37 0.00 42.43 1.40
3304 3556 2.965462 GCCCGGCCGTCGAATTAG 60.965 66.667 26.12 5.50 42.43 1.73
3305 3557 2.497770 CCCGGCCGTCGAATTAGT 59.502 61.111 26.12 0.00 42.43 2.24
3306 3558 1.881252 CCCGGCCGTCGAATTAGTG 60.881 63.158 26.12 3.84 42.43 2.74
3307 3559 2.522638 CCGGCCGTCGAATTAGTGC 61.523 63.158 26.12 0.00 42.43 4.40
3308 3560 2.522638 CGGCCGTCGAATTAGTGCC 61.523 63.158 19.50 0.00 42.43 5.01
3309 3561 1.448893 GGCCGTCGAATTAGTGCCA 60.449 57.895 0.00 0.00 38.73 4.92
3310 3562 1.429148 GGCCGTCGAATTAGTGCCAG 61.429 60.000 0.00 0.00 38.73 4.85
3311 3563 0.459585 GCCGTCGAATTAGTGCCAGA 60.460 55.000 0.00 0.00 0.00 3.86
3312 3564 1.806623 GCCGTCGAATTAGTGCCAGAT 60.807 52.381 0.00 0.00 0.00 2.90
3313 3565 1.860950 CCGTCGAATTAGTGCCAGATG 59.139 52.381 0.00 0.00 0.00 2.90
3314 3566 2.540515 CGTCGAATTAGTGCCAGATGT 58.459 47.619 0.00 0.00 0.00 3.06
3315 3567 2.535984 CGTCGAATTAGTGCCAGATGTC 59.464 50.000 0.00 0.00 0.00 3.06
3316 3568 2.866762 GTCGAATTAGTGCCAGATGTCC 59.133 50.000 0.00 0.00 0.00 4.02
3317 3569 2.499693 TCGAATTAGTGCCAGATGTCCA 59.500 45.455 0.00 0.00 0.00 4.02
3318 3570 2.868583 CGAATTAGTGCCAGATGTCCAG 59.131 50.000 0.00 0.00 0.00 3.86
3319 3571 2.338577 ATTAGTGCCAGATGTCCAGC 57.661 50.000 0.00 0.00 0.00 4.85
3320 3572 0.108186 TTAGTGCCAGATGTCCAGCG 60.108 55.000 0.00 0.00 0.00 5.18
3321 3573 1.257750 TAGTGCCAGATGTCCAGCGT 61.258 55.000 0.00 0.00 0.00 5.07
3322 3574 2.046988 TGCCAGATGTCCAGCGTG 60.047 61.111 0.00 0.00 0.00 5.34
3323 3575 2.821366 GCCAGATGTCCAGCGTGG 60.821 66.667 0.00 0.00 39.43 4.94
3324 3576 2.821366 CCAGATGTCCAGCGTGGC 60.821 66.667 0.00 0.00 37.47 5.01
3325 3577 2.821366 CAGATGTCCAGCGTGGCC 60.821 66.667 0.00 0.00 37.47 5.36
3326 3578 3.005539 AGATGTCCAGCGTGGCCT 61.006 61.111 3.32 0.00 37.47 5.19
3327 3579 2.512515 GATGTCCAGCGTGGCCTC 60.513 66.667 3.32 0.00 37.47 4.70
3328 3580 3.315142 GATGTCCAGCGTGGCCTCA 62.315 63.158 3.32 0.00 37.47 3.86
3329 3581 3.320879 ATGTCCAGCGTGGCCTCAG 62.321 63.158 3.32 0.00 37.47 3.35
3330 3582 3.695606 GTCCAGCGTGGCCTCAGA 61.696 66.667 3.32 0.00 37.47 3.27
3331 3583 2.685017 TCCAGCGTGGCCTCAGAT 60.685 61.111 3.32 0.00 37.47 2.90
3332 3584 1.381191 TCCAGCGTGGCCTCAGATA 60.381 57.895 3.32 0.00 37.47 1.98
3333 3585 0.975556 TCCAGCGTGGCCTCAGATAA 60.976 55.000 3.32 0.00 37.47 1.75
3334 3586 0.811616 CCAGCGTGGCCTCAGATAAC 60.812 60.000 3.32 0.00 0.00 1.89
3335 3587 1.141881 AGCGTGGCCTCAGATAACG 59.858 57.895 3.32 4.47 37.32 3.18
3336 3588 1.153628 GCGTGGCCTCAGATAACGT 60.154 57.895 3.32 0.00 36.65 3.99
3337 3589 1.421410 GCGTGGCCTCAGATAACGTG 61.421 60.000 3.32 0.00 36.65 4.49
3338 3590 0.806102 CGTGGCCTCAGATAACGTGG 60.806 60.000 3.32 0.00 0.00 4.94
3339 3591 1.090052 GTGGCCTCAGATAACGTGGC 61.090 60.000 3.32 2.35 42.56 5.01
3340 3592 4.126524 GCCTCAGATAACGTGGCC 57.873 61.111 0.00 0.00 37.81 5.36
3341 3593 1.883084 GCCTCAGATAACGTGGCCG 60.883 63.158 0.00 0.00 37.81 6.13
3358 3610 6.814343 CGTGGCCGTATTTATATCTAAACAC 58.186 40.000 0.00 0.00 29.85 3.32
3359 3611 6.421501 CGTGGCCGTATTTATATCTAAACACA 59.578 38.462 0.00 0.00 29.85 3.72
3360 3612 7.117236 CGTGGCCGTATTTATATCTAAACACAT 59.883 37.037 0.00 0.00 29.85 3.21
3361 3613 8.227791 GTGGCCGTATTTATATCTAAACACATG 58.772 37.037 0.00 0.00 29.85 3.21
3362 3614 7.094975 TGGCCGTATTTATATCTAAACACATGC 60.095 37.037 0.00 0.00 29.85 4.06
3363 3615 7.094975 GGCCGTATTTATATCTAAACACATGCA 60.095 37.037 0.00 0.00 29.74 3.96
3364 3616 8.450964 GCCGTATTTATATCTAAACACATGCAT 58.549 33.333 0.00 0.00 29.16 3.96
3365 3617 9.973246 CCGTATTTATATCTAAACACATGCATC 57.027 33.333 0.00 0.00 29.85 3.91
3366 3618 9.675553 CGTATTTATATCTAAACACATGCATCG 57.324 33.333 0.00 0.00 29.85 3.84
3371 3623 4.833469 TCTAAACACATGCATCGTTACG 57.167 40.909 10.62 0.00 0.00 3.18
3372 3624 4.487019 TCTAAACACATGCATCGTTACGA 58.513 39.130 10.62 10.62 41.13 3.43
3373 3625 3.449322 AAACACATGCATCGTTACGAC 57.551 42.857 10.39 0.00 39.18 4.34
3374 3626 2.363788 ACACATGCATCGTTACGACT 57.636 45.000 10.39 0.00 39.18 4.18
3375 3627 2.683968 ACACATGCATCGTTACGACTT 58.316 42.857 10.39 0.00 39.18 3.01
3376 3628 2.666508 ACACATGCATCGTTACGACTTC 59.333 45.455 10.39 2.69 39.18 3.01
3377 3629 2.923655 CACATGCATCGTTACGACTTCT 59.076 45.455 10.39 0.00 39.18 2.85
3378 3630 3.000674 CACATGCATCGTTACGACTTCTC 60.001 47.826 10.39 0.00 39.18 2.87
3379 3631 2.273370 TGCATCGTTACGACTTCTCC 57.727 50.000 10.39 0.00 39.18 3.71
3380 3632 1.542472 TGCATCGTTACGACTTCTCCA 59.458 47.619 10.39 0.00 39.18 3.86
3381 3633 2.029739 TGCATCGTTACGACTTCTCCAA 60.030 45.455 10.39 0.00 39.18 3.53
3382 3634 2.344741 GCATCGTTACGACTTCTCCAAC 59.655 50.000 10.39 0.00 39.18 3.77
3383 3635 3.834610 CATCGTTACGACTTCTCCAACT 58.165 45.455 10.39 0.00 39.18 3.16
3384 3636 3.996150 TCGTTACGACTTCTCCAACTT 57.004 42.857 2.33 0.00 0.00 2.66
3385 3637 3.635331 TCGTTACGACTTCTCCAACTTG 58.365 45.455 2.33 0.00 0.00 3.16
3386 3638 3.067180 TCGTTACGACTTCTCCAACTTGT 59.933 43.478 2.33 0.00 0.00 3.16
3387 3639 3.424529 CGTTACGACTTCTCCAACTTGTC 59.575 47.826 0.00 0.00 0.00 3.18
3388 3640 2.528041 ACGACTTCTCCAACTTGTCC 57.472 50.000 0.00 0.00 0.00 4.02
3389 3641 1.760613 ACGACTTCTCCAACTTGTCCA 59.239 47.619 0.00 0.00 0.00 4.02
3390 3642 2.169769 ACGACTTCTCCAACTTGTCCAA 59.830 45.455 0.00 0.00 0.00 3.53
3391 3643 3.202906 CGACTTCTCCAACTTGTCCAAA 58.797 45.455 0.00 0.00 0.00 3.28
3392 3644 3.248602 CGACTTCTCCAACTTGTCCAAAG 59.751 47.826 0.00 0.00 0.00 2.77
3393 3645 4.200092 GACTTCTCCAACTTGTCCAAAGT 58.800 43.478 0.00 0.00 0.00 2.66
3394 3646 4.200092 ACTTCTCCAACTTGTCCAAAGTC 58.800 43.478 0.00 0.00 0.00 3.01
3395 3647 3.924114 TCTCCAACTTGTCCAAAGTCA 57.076 42.857 0.00 0.00 0.00 3.41
3396 3648 3.541632 TCTCCAACTTGTCCAAAGTCAC 58.458 45.455 0.00 0.00 0.00 3.67
3397 3649 3.054728 TCTCCAACTTGTCCAAAGTCACA 60.055 43.478 0.00 0.00 0.00 3.58
3398 3650 3.691575 TCCAACTTGTCCAAAGTCACAA 58.308 40.909 0.00 0.00 0.00 3.33
3399 3651 3.442273 TCCAACTTGTCCAAAGTCACAAC 59.558 43.478 0.00 0.00 0.00 3.32
3400 3652 3.428862 CCAACTTGTCCAAAGTCACAACC 60.429 47.826 0.00 0.00 0.00 3.77
3401 3653 2.014128 ACTTGTCCAAAGTCACAACCG 58.986 47.619 0.00 0.00 0.00 4.44
3402 3654 2.285083 CTTGTCCAAAGTCACAACCGA 58.715 47.619 0.00 0.00 0.00 4.69
3403 3655 2.404923 TGTCCAAAGTCACAACCGAA 57.595 45.000 0.00 0.00 0.00 4.30
3404 3656 2.712709 TGTCCAAAGTCACAACCGAAA 58.287 42.857 0.00 0.00 0.00 3.46
3405 3657 3.283751 TGTCCAAAGTCACAACCGAAAT 58.716 40.909 0.00 0.00 0.00 2.17
3406 3658 4.452825 TGTCCAAAGTCACAACCGAAATA 58.547 39.130 0.00 0.00 0.00 1.40
3407 3659 4.273969 TGTCCAAAGTCACAACCGAAATAC 59.726 41.667 0.00 0.00 0.00 1.89
3408 3660 3.816523 TCCAAAGTCACAACCGAAATACC 59.183 43.478 0.00 0.00 0.00 2.73
3409 3661 3.566322 CCAAAGTCACAACCGAAATACCA 59.434 43.478 0.00 0.00 0.00 3.25
3410 3662 4.036971 CCAAAGTCACAACCGAAATACCAA 59.963 41.667 0.00 0.00 0.00 3.67
3411 3663 4.823790 AAGTCACAACCGAAATACCAAC 57.176 40.909 0.00 0.00 0.00 3.77
3412 3664 3.811083 AGTCACAACCGAAATACCAACA 58.189 40.909 0.00 0.00 0.00 3.33
3413 3665 3.813166 AGTCACAACCGAAATACCAACAG 59.187 43.478 0.00 0.00 0.00 3.16
3414 3666 3.810941 GTCACAACCGAAATACCAACAGA 59.189 43.478 0.00 0.00 0.00 3.41
3415 3667 4.273969 GTCACAACCGAAATACCAACAGAA 59.726 41.667 0.00 0.00 0.00 3.02
3416 3668 4.882427 TCACAACCGAAATACCAACAGAAA 59.118 37.500 0.00 0.00 0.00 2.52
3417 3669 5.533154 TCACAACCGAAATACCAACAGAAAT 59.467 36.000 0.00 0.00 0.00 2.17
3418 3670 5.856455 CACAACCGAAATACCAACAGAAATC 59.144 40.000 0.00 0.00 0.00 2.17
3419 3671 5.533154 ACAACCGAAATACCAACAGAAATCA 59.467 36.000 0.00 0.00 0.00 2.57
3420 3672 5.622770 ACCGAAATACCAACAGAAATCAC 57.377 39.130 0.00 0.00 0.00 3.06
3421 3673 5.067273 ACCGAAATACCAACAGAAATCACA 58.933 37.500 0.00 0.00 0.00 3.58
3422 3674 5.710099 ACCGAAATACCAACAGAAATCACAT 59.290 36.000 0.00 0.00 0.00 3.21
3423 3675 6.208599 ACCGAAATACCAACAGAAATCACATT 59.791 34.615 0.00 0.00 0.00 2.71
3424 3676 7.090173 CCGAAATACCAACAGAAATCACATTT 58.910 34.615 0.00 0.00 34.64 2.32
3425 3677 7.273381 CCGAAATACCAACAGAAATCACATTTC 59.727 37.037 1.37 1.37 46.90 2.17
3437 3689 7.727331 GAAATCACATTTCTAGCTCTAGCAT 57.273 36.000 4.54 0.00 44.00 3.79
3438 3690 7.727331 AAATCACATTTCTAGCTCTAGCATC 57.273 36.000 4.54 0.00 45.16 3.91
3439 3691 5.859205 TCACATTTCTAGCTCTAGCATCA 57.141 39.130 4.54 0.00 45.16 3.07
3440 3692 6.225981 TCACATTTCTAGCTCTAGCATCAA 57.774 37.500 4.54 0.00 45.16 2.57
3441 3693 6.643388 TCACATTTCTAGCTCTAGCATCAAA 58.357 36.000 4.54 0.35 45.16 2.69
3442 3694 7.105588 TCACATTTCTAGCTCTAGCATCAAAA 58.894 34.615 4.54 0.34 45.16 2.44
3443 3695 7.279536 TCACATTTCTAGCTCTAGCATCAAAAG 59.720 37.037 4.54 0.16 45.16 2.27
3444 3696 7.065563 CACATTTCTAGCTCTAGCATCAAAAGT 59.934 37.037 4.54 0.72 45.16 2.66
3445 3697 6.974932 TTTCTAGCTCTAGCATCAAAAGTG 57.025 37.500 4.54 0.00 45.16 3.16
3446 3698 5.667539 TCTAGCTCTAGCATCAAAAGTGT 57.332 39.130 4.54 0.00 45.16 3.55
3447 3699 6.042638 TCTAGCTCTAGCATCAAAAGTGTT 57.957 37.500 4.54 0.00 45.16 3.32
3448 3700 6.467677 TCTAGCTCTAGCATCAAAAGTGTTT 58.532 36.000 4.54 0.00 45.16 2.83
3449 3701 5.619625 AGCTCTAGCATCAAAAGTGTTTC 57.380 39.130 4.54 0.00 45.16 2.78
3450 3702 5.312079 AGCTCTAGCATCAAAAGTGTTTCT 58.688 37.500 4.54 0.00 45.16 2.52
3451 3703 5.767168 AGCTCTAGCATCAAAAGTGTTTCTT 59.233 36.000 4.54 0.00 45.16 2.52
3452 3704 6.264067 AGCTCTAGCATCAAAAGTGTTTCTTT 59.736 34.615 4.54 0.00 44.77 2.52
3453 3705 6.920210 GCTCTAGCATCAAAAGTGTTTCTTTT 59.080 34.615 0.00 0.55 46.45 2.27
3454 3706 7.436376 GCTCTAGCATCAAAAGTGTTTCTTTTT 59.564 33.333 0.00 0.00 45.06 1.94
3476 3728 8.785329 TTTTTCCTTTTTAGCATCAAAAGTGT 57.215 26.923 11.75 0.00 38.90 3.55
3477 3729 8.785329 TTTTCCTTTTTAGCATCAAAAGTGTT 57.215 26.923 11.75 0.00 38.90 3.32
3478 3730 7.769272 TTCCTTTTTAGCATCAAAAGTGTTG 57.231 32.000 11.75 0.00 38.90 3.33
3479 3731 7.106439 TCCTTTTTAGCATCAAAAGTGTTGA 57.894 32.000 0.00 0.00 38.90 3.18
3480 3732 6.978080 TCCTTTTTAGCATCAAAAGTGTTGAC 59.022 34.615 0.00 0.00 38.90 3.18
3481 3733 6.756074 CCTTTTTAGCATCAAAAGTGTTGACA 59.244 34.615 0.00 0.00 38.90 3.58
3482 3734 7.043192 CCTTTTTAGCATCAAAAGTGTTGACAG 60.043 37.037 0.00 0.00 38.90 3.51
3483 3735 6.691754 TTTAGCATCAAAAGTGTTGACAGA 57.308 33.333 0.00 0.00 0.00 3.41
3484 3736 6.882610 TTAGCATCAAAAGTGTTGACAGAT 57.117 33.333 0.00 0.00 0.00 2.90
3485 3737 7.977789 TTAGCATCAAAAGTGTTGACAGATA 57.022 32.000 0.00 0.00 0.00 1.98
3486 3738 8.565896 TTAGCATCAAAAGTGTTGACAGATAT 57.434 30.769 0.00 0.00 0.00 1.63
3487 3739 7.458409 AGCATCAAAAGTGTTGACAGATATT 57.542 32.000 0.00 0.00 0.00 1.28
3488 3740 7.889469 AGCATCAAAAGTGTTGACAGATATTT 58.111 30.769 0.00 0.00 0.00 1.40
3489 3741 9.013229 AGCATCAAAAGTGTTGACAGATATTTA 57.987 29.630 0.00 0.00 0.00 1.40
3490 3742 9.065871 GCATCAAAAGTGTTGACAGATATTTAC 57.934 33.333 0.00 0.00 0.00 2.01
3491 3743 9.559958 CATCAAAAGTGTTGACAGATATTTACC 57.440 33.333 0.00 0.00 0.00 2.85
3492 3744 8.106247 TCAAAAGTGTTGACAGATATTTACCC 57.894 34.615 0.00 0.00 0.00 3.69
3493 3745 6.737254 AAAGTGTTGACAGATATTTACCCG 57.263 37.500 0.00 0.00 0.00 5.28
3494 3746 5.670792 AGTGTTGACAGATATTTACCCGA 57.329 39.130 0.00 0.00 0.00 5.14
3495 3747 5.661458 AGTGTTGACAGATATTTACCCGAG 58.339 41.667 0.00 0.00 0.00 4.63
3496 3748 5.421056 AGTGTTGACAGATATTTACCCGAGA 59.579 40.000 0.00 0.00 0.00 4.04
3497 3749 5.519206 GTGTTGACAGATATTTACCCGAGAC 59.481 44.000 0.00 0.00 0.00 3.36
3498 3750 5.186215 TGTTGACAGATATTTACCCGAGACA 59.814 40.000 0.00 0.00 0.00 3.41
3499 3751 5.925506 TGACAGATATTTACCCGAGACAA 57.074 39.130 0.00 0.00 0.00 3.18
3500 3752 6.288941 TGACAGATATTTACCCGAGACAAA 57.711 37.500 0.00 0.00 0.00 2.83
3501 3753 6.703319 TGACAGATATTTACCCGAGACAAAA 58.297 36.000 0.00 0.00 0.00 2.44
3502 3754 7.335627 TGACAGATATTTACCCGAGACAAAAT 58.664 34.615 0.00 0.00 0.00 1.82
3503 3755 8.479689 TGACAGATATTTACCCGAGACAAAATA 58.520 33.333 0.00 0.00 0.00 1.40
3504 3756 9.321562 GACAGATATTTACCCGAGACAAAATAA 57.678 33.333 0.00 0.00 30.12 1.40
3505 3757 9.847224 ACAGATATTTACCCGAGACAAAATAAT 57.153 29.630 0.00 0.00 30.12 1.28
3508 3760 9.394477 GATATTTACCCGAGACAAAATAATTGC 57.606 33.333 0.00 0.00 30.12 3.56
3509 3761 6.827586 TTTACCCGAGACAAAATAATTGCT 57.172 33.333 0.00 0.00 0.00 3.91
3510 3762 7.925043 TTTACCCGAGACAAAATAATTGCTA 57.075 32.000 0.00 0.00 0.00 3.49
3511 3763 5.813080 ACCCGAGACAAAATAATTGCTAC 57.187 39.130 0.00 0.00 0.00 3.58
3512 3764 5.250200 ACCCGAGACAAAATAATTGCTACA 58.750 37.500 0.00 0.00 0.00 2.74
3513 3765 5.885912 ACCCGAGACAAAATAATTGCTACAT 59.114 36.000 0.00 0.00 0.00 2.29
3514 3766 6.038271 ACCCGAGACAAAATAATTGCTACATC 59.962 38.462 0.00 0.00 0.00 3.06
3515 3767 6.260936 CCCGAGACAAAATAATTGCTACATCT 59.739 38.462 0.00 0.00 0.00 2.90
3516 3768 7.201732 CCCGAGACAAAATAATTGCTACATCTT 60.202 37.037 0.00 0.00 0.00 2.40
3517 3769 8.184192 CCGAGACAAAATAATTGCTACATCTTT 58.816 33.333 0.00 0.00 0.00 2.52
3518 3770 9.559958 CGAGACAAAATAATTGCTACATCTTTT 57.440 29.630 0.00 0.00 0.00 2.27
3522 3774 9.128107 ACAAAATAATTGCTACATCTTTTGTCG 57.872 29.630 0.00 0.00 39.70 4.35
3523 3775 9.128107 CAAAATAATTGCTACATCTTTTGTCGT 57.872 29.630 0.00 0.00 39.87 4.34
3524 3776 8.673626 AAATAATTGCTACATCTTTTGTCGTG 57.326 30.769 0.00 0.00 39.87 4.35
3525 3777 5.689383 AATTGCTACATCTTTTGTCGTGT 57.311 34.783 0.00 0.00 39.87 4.49
3526 3778 5.689383 ATTGCTACATCTTTTGTCGTGTT 57.311 34.783 0.00 0.00 39.87 3.32
3527 3779 6.795098 ATTGCTACATCTTTTGTCGTGTTA 57.205 33.333 0.00 0.00 39.87 2.41
3528 3780 6.795098 TTGCTACATCTTTTGTCGTGTTAT 57.205 33.333 0.00 0.00 39.87 1.89
3529 3781 6.795098 TGCTACATCTTTTGTCGTGTTATT 57.205 33.333 0.00 0.00 39.87 1.40
3530 3782 6.598525 TGCTACATCTTTTGTCGTGTTATTG 58.401 36.000 0.00 0.00 39.87 1.90
3531 3783 6.425417 TGCTACATCTTTTGTCGTGTTATTGA 59.575 34.615 0.00 0.00 39.87 2.57
3532 3784 7.119116 TGCTACATCTTTTGTCGTGTTATTGAT 59.881 33.333 0.00 0.00 39.87 2.57
3533 3785 7.426456 GCTACATCTTTTGTCGTGTTATTGATG 59.574 37.037 0.00 0.00 39.87 3.07
3534 3786 7.433708 ACATCTTTTGTCGTGTTATTGATGA 57.566 32.000 0.00 0.00 30.89 2.92
3535 3787 7.298122 ACATCTTTTGTCGTGTTATTGATGAC 58.702 34.615 0.00 0.00 30.89 3.06
3536 3788 5.911421 TCTTTTGTCGTGTTATTGATGACG 58.089 37.500 0.00 0.00 32.83 4.35
3537 3789 5.464057 TCTTTTGTCGTGTTATTGATGACGT 59.536 36.000 0.00 0.00 32.83 4.34
3538 3790 5.660629 TTTGTCGTGTTATTGATGACGTT 57.339 34.783 0.00 0.00 32.83 3.99
3539 3791 6.766452 TTTGTCGTGTTATTGATGACGTTA 57.234 33.333 0.00 0.00 32.83 3.18
3540 3792 5.750484 TGTCGTGTTATTGATGACGTTAC 57.250 39.130 0.00 0.00 32.83 2.50
3541 3793 4.622313 TGTCGTGTTATTGATGACGTTACC 59.378 41.667 0.00 0.00 32.83 2.85
3542 3794 3.853103 TCGTGTTATTGATGACGTTACCG 59.147 43.478 0.00 0.00 40.83 4.02
3543 3795 3.000476 CGTGTTATTGATGACGTTACCGG 60.000 47.826 0.00 0.00 38.78 5.28
3544 3796 2.931325 TGTTATTGATGACGTTACCGGC 59.069 45.455 0.00 0.00 44.55 6.13
3550 3802 4.167483 GACGTTACCGGCGCTAAA 57.833 55.556 7.64 0.00 38.78 1.85
3551 3803 2.444210 GACGTTACCGGCGCTAAAA 58.556 52.632 7.64 0.00 38.78 1.52
3552 3804 0.367887 GACGTTACCGGCGCTAAAAG 59.632 55.000 7.64 0.00 38.78 2.27
3553 3805 0.319813 ACGTTACCGGCGCTAAAAGT 60.320 50.000 7.64 0.44 38.78 2.66
3554 3806 1.067915 ACGTTACCGGCGCTAAAAGTA 60.068 47.619 7.64 0.00 38.78 2.24
3555 3807 2.195922 CGTTACCGGCGCTAAAAGTAT 58.804 47.619 7.64 0.00 0.00 2.12
3556 3808 2.034339 CGTTACCGGCGCTAAAAGTATG 60.034 50.000 7.64 0.00 0.00 2.39
3557 3809 3.189285 GTTACCGGCGCTAAAAGTATGA 58.811 45.455 7.64 0.00 0.00 2.15
3558 3810 2.389962 ACCGGCGCTAAAAGTATGAA 57.610 45.000 7.64 0.00 0.00 2.57
3559 3811 2.702261 ACCGGCGCTAAAAGTATGAAA 58.298 42.857 7.64 0.00 0.00 2.69
3560 3812 2.417586 ACCGGCGCTAAAAGTATGAAAC 59.582 45.455 7.64 0.00 0.00 2.78
3561 3813 2.676342 CCGGCGCTAAAAGTATGAAACT 59.324 45.455 7.64 0.00 41.49 2.66
3562 3814 3.485216 CCGGCGCTAAAAGTATGAAACTG 60.485 47.826 7.64 0.00 38.88 3.16
3563 3815 3.485216 CGGCGCTAAAAGTATGAAACTGG 60.485 47.826 7.64 0.00 38.88 4.00
3564 3816 3.439129 GGCGCTAAAAGTATGAAACTGGT 59.561 43.478 7.64 0.00 38.88 4.00
3565 3817 4.082949 GGCGCTAAAAGTATGAAACTGGTT 60.083 41.667 7.64 0.00 38.88 3.67
3566 3818 5.458015 GCGCTAAAAGTATGAAACTGGTTT 58.542 37.500 0.00 0.00 38.88 3.27
3567 3819 5.918576 GCGCTAAAAGTATGAAACTGGTTTT 59.081 36.000 0.00 0.00 38.88 2.43
3568 3820 6.087687 GCGCTAAAAGTATGAAACTGGTTTTC 59.912 38.462 0.00 0.00 43.63 2.29
3583 3835 9.612066 AAACTGGTTTTCAAAATGACATAATGT 57.388 25.926 0.00 0.00 0.00 2.71
3585 3837 9.691362 ACTGGTTTTCAAAATGACATAATGTAC 57.309 29.630 0.00 0.00 0.00 2.90
3586 3838 9.689976 CTGGTTTTCAAAATGACATAATGTACA 57.310 29.630 0.00 0.00 0.00 2.90
3623 3875 8.655935 ATTGATTAAAGGAAAGTCCAATGAGT 57.344 30.769 0.00 0.00 39.61 3.41
3624 3876 7.687941 TGATTAAAGGAAAGTCCAATGAGTC 57.312 36.000 0.00 0.00 39.61 3.36
3625 3877 6.659242 TGATTAAAGGAAAGTCCAATGAGTCC 59.341 38.462 0.00 0.00 39.61 3.85
3626 3878 4.731313 AAAGGAAAGTCCAATGAGTCCT 57.269 40.909 0.00 0.00 39.61 3.85
3627 3879 3.990959 AGGAAAGTCCAATGAGTCCTC 57.009 47.619 0.00 0.00 39.61 3.71
3628 3880 2.234908 AGGAAAGTCCAATGAGTCCTCG 59.765 50.000 0.00 0.00 39.61 4.63
3629 3881 2.028020 GGAAAGTCCAATGAGTCCTCGT 60.028 50.000 0.00 0.00 36.28 4.18
3630 3882 2.751166 AAGTCCAATGAGTCCTCGTG 57.249 50.000 0.00 0.00 0.00 4.35
3631 3883 1.924731 AGTCCAATGAGTCCTCGTGA 58.075 50.000 0.00 0.00 0.00 4.35
3632 3884 2.461695 AGTCCAATGAGTCCTCGTGAT 58.538 47.619 0.00 0.00 0.00 3.06
3633 3885 2.167281 AGTCCAATGAGTCCTCGTGATG 59.833 50.000 0.00 0.00 0.00 3.07
3634 3886 2.166459 GTCCAATGAGTCCTCGTGATGA 59.834 50.000 0.00 0.00 0.00 2.92
3635 3887 3.033909 TCCAATGAGTCCTCGTGATGAT 58.966 45.455 0.00 0.00 0.00 2.45
3636 3888 4.038042 GTCCAATGAGTCCTCGTGATGATA 59.962 45.833 0.00 0.00 0.00 2.15
3637 3889 4.649218 TCCAATGAGTCCTCGTGATGATAA 59.351 41.667 0.00 0.00 0.00 1.75
3638 3890 5.305386 TCCAATGAGTCCTCGTGATGATAAT 59.695 40.000 0.00 0.00 0.00 1.28
3639 3891 5.994054 CCAATGAGTCCTCGTGATGATAATT 59.006 40.000 0.00 0.00 0.00 1.40
3640 3892 6.484643 CCAATGAGTCCTCGTGATGATAATTT 59.515 38.462 0.00 0.00 0.00 1.82
3641 3893 7.012704 CCAATGAGTCCTCGTGATGATAATTTT 59.987 37.037 0.00 0.00 0.00 1.82
3642 3894 6.908870 TGAGTCCTCGTGATGATAATTTTG 57.091 37.500 0.00 0.00 0.00 2.44
3643 3895 6.639563 TGAGTCCTCGTGATGATAATTTTGA 58.360 36.000 0.00 0.00 0.00 2.69
3644 3896 7.102993 TGAGTCCTCGTGATGATAATTTTGAA 58.897 34.615 0.00 0.00 0.00 2.69
3645 3897 7.064609 TGAGTCCTCGTGATGATAATTTTGAAC 59.935 37.037 0.00 0.00 0.00 3.18
3646 3898 6.316390 AGTCCTCGTGATGATAATTTTGAACC 59.684 38.462 0.00 0.00 0.00 3.62
3647 3899 6.093495 GTCCTCGTGATGATAATTTTGAACCA 59.907 38.462 0.00 0.00 0.00 3.67
3648 3900 6.316140 TCCTCGTGATGATAATTTTGAACCAG 59.684 38.462 0.00 0.00 0.00 4.00
3649 3901 5.879237 TCGTGATGATAATTTTGAACCAGC 58.121 37.500 0.00 0.00 0.00 4.85
3650 3902 4.730042 CGTGATGATAATTTTGAACCAGCG 59.270 41.667 0.00 0.00 0.00 5.18
3651 3903 5.640732 GTGATGATAATTTTGAACCAGCGT 58.359 37.500 0.00 0.00 0.00 5.07
3652 3904 6.092748 GTGATGATAATTTTGAACCAGCGTT 58.907 36.000 0.00 0.00 33.88 4.84
3653 3905 6.586082 GTGATGATAATTTTGAACCAGCGTTT 59.414 34.615 0.00 0.00 30.30 3.60
3654 3906 6.585702 TGATGATAATTTTGAACCAGCGTTTG 59.414 34.615 0.00 0.00 30.30 2.93
3655 3907 4.683781 TGATAATTTTGAACCAGCGTTTGC 59.316 37.500 0.00 0.00 43.24 3.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 9.907229 TTCTCCATACATCTATCTATGATACGT 57.093 33.333 0.00 0.00 0.00 3.57
23 24 9.073475 AGTTACTCTGTTCTCCATACATCTATC 57.927 37.037 0.00 0.00 0.00 2.08
35 36 5.415221 AGCATTAGCAGTTACTCTGTTCTC 58.585 41.667 0.00 0.00 45.23 2.87
48 49 4.877823 TGTTTCAGTATGGAGCATTAGCAG 59.122 41.667 0.00 0.00 39.42 4.24
90 93 0.035630 AATCCTCAGTCTGCTGGTGC 60.036 55.000 10.26 0.00 42.78 5.01
92 95 1.004044 CCAAATCCTCAGTCTGCTGGT 59.996 52.381 10.26 0.00 42.78 4.00
94 97 2.082231 CACCAAATCCTCAGTCTGCTG 58.918 52.381 0.00 0.00 43.87 4.41
97 100 2.082231 CTGCACCAAATCCTCAGTCTG 58.918 52.381 0.00 0.00 0.00 3.51
101 104 2.746362 GAGTTCTGCACCAAATCCTCAG 59.254 50.000 0.00 0.00 0.00 3.35
139 142 4.801330 TTATCTTTGTCTTCAGAGCCGA 57.199 40.909 0.00 0.00 0.00 5.54
213 221 1.202452 TGCATGATGACTGGACGCTAG 60.202 52.381 0.00 0.00 0.00 3.42
240 248 1.864750 CGCGCGGAATCAAAGCAAG 60.865 57.895 24.84 0.00 0.00 4.01
275 283 2.225467 GATTACAGGCTGGGATTCTGC 58.775 52.381 20.34 0.00 39.26 4.26
331 339 9.809096 TCTGACAGTAGCTAAGAATGATAAAAG 57.191 33.333 1.59 0.00 0.00 2.27
333 341 8.972127 ACTCTGACAGTAGCTAAGAATGATAAA 58.028 33.333 1.59 0.00 31.37 1.40
334 342 8.526667 ACTCTGACAGTAGCTAAGAATGATAA 57.473 34.615 1.59 0.00 31.37 1.75
335 343 8.526667 AACTCTGACAGTAGCTAAGAATGATA 57.473 34.615 1.59 0.00 32.30 2.15
340 357 6.940867 TCTGTAACTCTGACAGTAGCTAAGAA 59.059 38.462 1.59 0.00 43.95 2.52
346 363 5.715070 ACATTCTGTAACTCTGACAGTAGC 58.285 41.667 1.59 0.00 43.95 3.58
361 378 3.678289 TGCTGATGCTGTTACATTCTGT 58.322 40.909 0.00 0.00 40.48 3.41
362 379 4.334481 TGATGCTGATGCTGTTACATTCTG 59.666 41.667 0.00 0.00 40.48 3.02
363 380 4.520179 TGATGCTGATGCTGTTACATTCT 58.480 39.130 0.00 0.00 40.48 2.40
364 381 4.888038 TGATGCTGATGCTGTTACATTC 57.112 40.909 0.00 0.00 40.48 2.67
366 383 5.126545 ACATTTGATGCTGATGCTGTTACAT 59.873 36.000 0.00 0.00 40.48 2.29
367 384 4.460034 ACATTTGATGCTGATGCTGTTACA 59.540 37.500 0.00 0.00 40.48 2.41
368 385 4.990257 ACATTTGATGCTGATGCTGTTAC 58.010 39.130 0.00 0.00 40.48 2.50
369 386 6.947644 ATACATTTGATGCTGATGCTGTTA 57.052 33.333 0.00 0.00 40.48 2.41
370 387 5.847111 ATACATTTGATGCTGATGCTGTT 57.153 34.783 0.00 0.00 40.48 3.16
398 415 3.633525 AGCAAAGAGTTTTCATGTGAGCA 59.366 39.130 0.00 0.00 0.00 4.26
414 431 5.382618 AGAATGCAGGAAAACTAGCAAAG 57.617 39.130 0.00 0.00 37.00 2.77
421 438 5.319453 TCATCTGAAGAATGCAGGAAAACT 58.681 37.500 0.00 0.00 44.09 2.66
423 440 5.563592 TCTCATCTGAAGAATGCAGGAAAA 58.436 37.500 0.00 0.00 44.09 2.29
426 443 5.104652 TGAATCTCATCTGAAGAATGCAGGA 60.105 40.000 0.00 0.00 44.09 3.86
427 444 5.123936 TGAATCTCATCTGAAGAATGCAGG 58.876 41.667 0.00 0.00 44.09 4.85
428 445 6.679327 TTGAATCTCATCTGAAGAATGCAG 57.321 37.500 0.00 0.00 45.89 4.41
429 446 6.657966 AGTTTGAATCTCATCTGAAGAATGCA 59.342 34.615 0.00 0.00 0.00 3.96
430 447 7.086230 AGTTTGAATCTCATCTGAAGAATGC 57.914 36.000 0.00 0.00 0.00 3.56
431 448 9.597170 TCTAGTTTGAATCTCATCTGAAGAATG 57.403 33.333 0.00 0.00 0.00 2.67
469 486 9.959721 ATCAAGTATGTCCTGTAACAACTAAAT 57.040 29.630 0.00 0.00 31.81 1.40
470 487 9.214957 CATCAAGTATGTCCTGTAACAACTAAA 57.785 33.333 0.00 0.00 31.81 1.85
475 492 7.277760 CGAATCATCAAGTATGTCCTGTAACAA 59.722 37.037 0.00 0.00 36.89 2.83
484 501 7.225538 ACTTGGAATCGAATCATCAAGTATGTC 59.774 37.037 18.04 0.00 41.70 3.06
486 503 7.488187 ACTTGGAATCGAATCATCAAGTATG 57.512 36.000 18.04 1.22 41.70 2.39
490 507 6.674694 AGAACTTGGAATCGAATCATCAAG 57.325 37.500 14.34 14.34 37.98 3.02
496 513 3.674423 CGCAAGAACTTGGAATCGAATC 58.326 45.455 14.95 0.00 40.74 2.52
531 552 3.685139 ACAGTACATACAACTGCTGCT 57.315 42.857 0.00 0.00 46.73 4.24
532 553 5.168569 TCTAACAGTACATACAACTGCTGC 58.831 41.667 3.24 0.00 46.73 5.25
533 554 6.183360 GCTTCTAACAGTACATACAACTGCTG 60.183 42.308 3.24 0.00 46.73 4.41
534 555 5.869888 GCTTCTAACAGTACATACAACTGCT 59.130 40.000 3.24 0.00 46.73 4.24
535 556 5.869888 AGCTTCTAACAGTACATACAACTGC 59.130 40.000 3.24 0.00 46.73 4.40
537 558 7.228314 TCAGCTTCTAACAGTACATACAACT 57.772 36.000 0.00 0.00 0.00 3.16
538 559 7.884816 TTCAGCTTCTAACAGTACATACAAC 57.115 36.000 0.00 0.00 0.00 3.32
543 564 6.992715 ACACTTTTCAGCTTCTAACAGTACAT 59.007 34.615 0.00 0.00 0.00 2.29
545 566 6.846325 ACACTTTTCAGCTTCTAACAGTAC 57.154 37.500 0.00 0.00 0.00 2.73
546 567 7.859325 AAACACTTTTCAGCTTCTAACAGTA 57.141 32.000 0.00 0.00 0.00 2.74
547 568 6.759497 AAACACTTTTCAGCTTCTAACAGT 57.241 33.333 0.00 0.00 0.00 3.55
548 569 7.852945 CAGTAAACACTTTTCAGCTTCTAACAG 59.147 37.037 0.00 0.00 0.00 3.16
549 570 7.551262 TCAGTAAACACTTTTCAGCTTCTAACA 59.449 33.333 0.00 0.00 0.00 2.41
550 571 7.916552 TCAGTAAACACTTTTCAGCTTCTAAC 58.083 34.615 0.00 0.00 0.00 2.34
551 572 8.500753 TTCAGTAAACACTTTTCAGCTTCTAA 57.499 30.769 0.00 0.00 0.00 2.10
552 573 8.677148 ATTCAGTAAACACTTTTCAGCTTCTA 57.323 30.769 0.00 0.00 0.00 2.10
553 574 7.573968 ATTCAGTAAACACTTTTCAGCTTCT 57.426 32.000 0.00 0.00 0.00 2.85
554 575 9.387123 CTAATTCAGTAAACACTTTTCAGCTTC 57.613 33.333 0.00 0.00 0.00 3.86
555 576 9.120538 TCTAATTCAGTAAACACTTTTCAGCTT 57.879 29.630 0.00 0.00 0.00 3.74
556 577 8.677148 TCTAATTCAGTAAACACTTTTCAGCT 57.323 30.769 0.00 0.00 0.00 4.24
557 578 9.899226 AATCTAATTCAGTAAACACTTTTCAGC 57.101 29.630 0.00 0.00 0.00 4.26
580 633 7.646314 AGTAGCATGTTGAATATTCTGCAATC 58.354 34.615 22.26 14.37 32.18 2.67
590 643 8.421002 TCTGTAAGCATAGTAGCATGTTGAATA 58.579 33.333 0.00 0.00 36.85 1.75
595 648 6.227298 ACTCTGTAAGCATAGTAGCATGTT 57.773 37.500 0.00 0.00 36.85 2.71
596 649 5.221342 GGACTCTGTAAGCATAGTAGCATGT 60.221 44.000 0.00 0.00 33.05 3.21
605 658 5.674525 CTGGAAATGGACTCTGTAAGCATA 58.325 41.667 0.00 0.00 0.00 3.14
626 684 0.171679 TGAAAATGCATCGCTGGCTG 59.828 50.000 0.00 0.00 0.00 4.85
627 685 1.108776 ATGAAAATGCATCGCTGGCT 58.891 45.000 0.00 0.00 0.00 4.75
628 686 1.856597 GAATGAAAATGCATCGCTGGC 59.143 47.619 0.00 0.00 0.00 4.85
629 687 3.113322 CAGAATGAAAATGCATCGCTGG 58.887 45.455 0.00 0.00 39.69 4.85
649 707 3.326880 GGAAGTTTCTAGACTGGGTTCCA 59.673 47.826 11.20 0.00 0.00 3.53
652 720 4.019231 GGATGGAAGTTTCTAGACTGGGTT 60.019 45.833 0.00 0.00 0.00 4.11
676 744 3.083293 ACTCGTACTTCTGGAGAGTTCC 58.917 50.000 2.23 0.00 44.31 3.62
694 762 9.706691 TTGCCAGTTTGCTAATACTATATACTC 57.293 33.333 0.00 0.00 0.00 2.59
908 976 1.133407 TGCGTGTTTATATAGCCGCG 58.867 50.000 0.00 0.00 43.68 6.46
942 1010 0.953727 TTTGCTGATGAGGTGTGCAC 59.046 50.000 10.75 10.75 33.13 4.57
950 1018 9.579768 GTAGTATATATGGTCTTTGCTGATGAG 57.420 37.037 0.00 0.00 0.00 2.90
969 1037 7.412853 TTGATGTGGCTGTGTTAGTAGTATA 57.587 36.000 0.00 0.00 0.00 1.47
970 1038 5.932619 TGATGTGGCTGTGTTAGTAGTAT 57.067 39.130 0.00 0.00 0.00 2.12
971 1039 5.731957 TTGATGTGGCTGTGTTAGTAGTA 57.268 39.130 0.00 0.00 0.00 1.82
972 1040 4.617253 TTGATGTGGCTGTGTTAGTAGT 57.383 40.909 0.00 0.00 0.00 2.73
973 1041 4.268644 CGATTGATGTGGCTGTGTTAGTAG 59.731 45.833 0.00 0.00 0.00 2.57
985 1053 0.249155 GCCATTGGCGATTGATGTGG 60.249 55.000 12.82 0.00 39.62 4.17
1087 1170 0.328258 CCACCTAAACCCAGACCCAG 59.672 60.000 0.00 0.00 0.00 4.45
1113 1196 1.613836 CAAGATCAAGCCCTATGCCC 58.386 55.000 0.00 0.00 42.71 5.36
1165 1260 4.105553 GTAACCCGACCCCTGGCC 62.106 72.222 0.00 0.00 0.00 5.36
1287 1382 3.047877 GAACCACACCCGGAAGCG 61.048 66.667 0.73 0.00 0.00 4.68
1296 1391 1.730547 CGACGTACCCGAACCACAC 60.731 63.158 0.00 0.00 37.88 3.82
1299 1394 1.172180 AAGACGACGTACCCGAACCA 61.172 55.000 0.00 0.00 37.88 3.67
1380 1475 2.579201 CCATTCGAGCCGACACCT 59.421 61.111 0.00 0.00 34.89 4.00
1407 1508 1.116536 TGTTACAGTCAGGACCGCCA 61.117 55.000 0.00 0.00 36.29 5.69
1410 1511 0.388134 CCGTGTTACAGTCAGGACCG 60.388 60.000 0.00 0.00 0.00 4.79
1416 1517 0.597568 CGGTACCCGTGTTACAGTCA 59.402 55.000 6.25 0.00 42.73 3.41
1466 1567 4.452733 CAGAGCCCGACCCCGAAC 62.453 72.222 0.00 0.00 38.22 3.95
1512 1619 0.246360 ATGACTCACGACCATGCGAA 59.754 50.000 0.00 0.00 34.83 4.70
1551 1658 2.433239 ACCATAACCAGACGATACACCC 59.567 50.000 0.00 0.00 0.00 4.61
1566 1673 0.462937 CATTCGACCCGCCACCATAA 60.463 55.000 0.00 0.00 0.00 1.90
1625 1732 2.015227 GCCACCAACAACACCACCAG 62.015 60.000 0.00 0.00 0.00 4.00
1678 1791 1.187087 CCTCCGTAAGAGTTGGAGCT 58.813 55.000 1.95 0.00 46.42 4.09
1689 1802 2.568090 GCGTTCGACCCTCCGTAA 59.432 61.111 0.00 0.00 0.00 3.18
1773 1886 2.158813 TGAACCTGAACCTGAACCAGAC 60.159 50.000 0.00 0.00 32.44 3.51
1776 1889 2.711009 AGATGAACCTGAACCTGAACCA 59.289 45.455 0.00 0.00 0.00 3.67
1819 1932 5.163854 CGAGAGGAATAACCAAACATGACAC 60.164 44.000 0.00 0.00 42.04 3.67
1820 1933 4.935205 CGAGAGGAATAACCAAACATGACA 59.065 41.667 0.00 0.00 42.04 3.58
1823 1936 5.631026 CAACGAGAGGAATAACCAAACATG 58.369 41.667 0.00 0.00 42.04 3.21
1824 1937 4.156008 GCAACGAGAGGAATAACCAAACAT 59.844 41.667 0.00 0.00 42.04 2.71
1838 1951 2.222596 GCGTCAATGTTAGCAACGAGAG 60.223 50.000 6.48 0.00 35.45 3.20
1953 2068 0.518636 CTGAGTTTGCACCCGACATG 59.481 55.000 0.00 0.00 0.00 3.21
1955 2070 1.227823 CCTGAGTTTGCACCCGACA 60.228 57.895 0.00 0.00 0.00 4.35
1998 2113 2.783135 GAGTTTGATCCACTGCCTGAA 58.217 47.619 0.00 0.00 0.00 3.02
2004 2119 2.600420 CGACATCGAGTTTGATCCACTG 59.400 50.000 0.00 0.00 43.02 3.66
2019 2134 1.635663 CGGAGTTTGCACCCGACATC 61.636 60.000 9.59 0.00 45.58 3.06
2037 2152 4.659874 GTTGCACCGAACGCACCG 62.660 66.667 0.00 0.00 39.59 4.94
2053 2168 0.321653 GAGTTTGATCCACCGCCTGT 60.322 55.000 0.00 0.00 0.00 4.00
2128 2243 1.364626 CTCGAACCAGCACCAGCATC 61.365 60.000 0.00 0.00 45.49 3.91
2129 2244 1.376424 CTCGAACCAGCACCAGCAT 60.376 57.895 0.00 0.00 45.49 3.79
2130 2245 2.031012 CTCGAACCAGCACCAGCA 59.969 61.111 0.00 0.00 45.49 4.41
2131 2246 3.426568 GCTCGAACCAGCACCAGC 61.427 66.667 0.00 0.00 39.43 4.85
2132 2247 1.739562 GAGCTCGAACCAGCACCAG 60.740 63.158 0.00 0.00 42.40 4.00
2135 2250 2.811317 CCGAGCTCGAACCAGCAC 60.811 66.667 36.59 0.00 42.40 4.40
2151 2266 3.799755 GATGCACCGAACGCACCC 61.800 66.667 0.00 0.00 43.35 4.61
2208 2323 0.108424 AGTCGGATGCAGAGCTTGAC 60.108 55.000 0.00 0.00 0.00 3.18
2212 2327 1.723608 CTCGAGTCGGATGCAGAGCT 61.724 60.000 13.54 0.00 0.00 4.09
2244 2371 8.768957 TGATGATGAGAACTTGAGAAGTAAAG 57.231 34.615 0.00 0.00 41.91 1.85
2255 2382 8.316946 TGAGTAAAGTGATGATGATGAGAACTT 58.683 33.333 0.00 0.00 0.00 2.66
2256 2383 7.845037 TGAGTAAAGTGATGATGATGAGAACT 58.155 34.615 0.00 0.00 0.00 3.01
2257 2384 8.484641 TTGAGTAAAGTGATGATGATGAGAAC 57.515 34.615 0.00 0.00 0.00 3.01
2258 2385 9.676861 AATTGAGTAAAGTGATGATGATGAGAA 57.323 29.630 0.00 0.00 0.00 2.87
2260 2387 8.890718 ACAATTGAGTAAAGTGATGATGATGAG 58.109 33.333 13.59 0.00 37.30 2.90
2265 2392 5.735892 CGCACAATTGAGTAAAGTGATGATG 59.264 40.000 13.59 0.00 37.30 3.07
2267 2394 4.754618 ACGCACAATTGAGTAAAGTGATGA 59.245 37.500 13.59 0.00 37.30 2.92
2268 2395 5.034554 ACGCACAATTGAGTAAAGTGATG 57.965 39.130 13.59 0.00 37.30 3.07
2270 2397 4.572795 TGAACGCACAATTGAGTAAAGTGA 59.427 37.500 13.59 0.00 37.30 3.41
2271 2398 4.843147 TGAACGCACAATTGAGTAAAGTG 58.157 39.130 13.59 0.00 39.75 3.16
2286 2413 4.265904 ACGGATATTCCATATGAACGCA 57.734 40.909 3.65 0.00 35.91 5.24
2287 2414 5.165676 TGTACGGATATTCCATATGAACGC 58.834 41.667 3.65 0.00 35.91 4.84
2292 2419 9.869757 TTAGAACATGTACGGATATTCCATATG 57.130 33.333 0.00 0.00 35.91 1.78
2301 2428 8.701908 AGGATTAGTTAGAACATGTACGGATA 57.298 34.615 0.00 0.00 0.00 2.59
2304 2431 6.854892 CGTAGGATTAGTTAGAACATGTACGG 59.145 42.308 0.00 0.00 0.00 4.02
2305 2432 7.412853 ACGTAGGATTAGTTAGAACATGTACG 58.587 38.462 0.00 2.43 0.00 3.67
2342 2469 6.018016 GCAGTTGCAATGGATAAAACTTTGTT 60.018 34.615 0.59 0.00 41.59 2.83
2344 2471 5.919196 GCAGTTGCAATGGATAAAACTTTG 58.081 37.500 0.59 0.00 41.59 2.77
2370 2498 1.396648 CAAGCACGTGTCACACTTGAA 59.603 47.619 18.19 0.00 40.06 2.69
2379 2507 5.090652 TGTAGAAAAATCAAGCACGTGTC 57.909 39.130 18.38 9.62 0.00 3.67
2410 2538 1.501741 CGTGCCAGAACCAAATCCG 59.498 57.895 0.00 0.00 0.00 4.18
2584 2712 3.847602 CCTGCTCCTCCTCCGCTG 61.848 72.222 0.00 0.00 0.00 5.18
2614 2742 3.145551 CCACCTCCGGACCCGTAG 61.146 72.222 0.00 0.60 37.81 3.51
2667 2795 1.007387 GCGTGAAGGCCACAAAAGG 60.007 57.895 5.01 0.00 45.98 3.11
2669 2797 2.115911 ACGCGTGAAGGCCACAAAA 61.116 52.632 12.93 0.00 45.98 2.44
2671 2799 3.276091 CACGCGTGAAGGCCACAA 61.276 61.111 34.93 0.00 45.98 3.33
2672 2800 2.161078 TATCACGCGTGAAGGCCACA 62.161 55.000 41.74 20.11 45.98 4.17
2673 2801 0.810031 ATATCACGCGTGAAGGCCAC 60.810 55.000 41.74 0.00 43.58 5.01
2674 2802 0.107897 AATATCACGCGTGAAGGCCA 60.108 50.000 41.74 24.99 43.58 5.36
2675 2803 1.014352 AAATATCACGCGTGAAGGCC 58.986 50.000 41.74 0.00 43.58 5.19
2677 2805 2.936498 AGGAAAATATCACGCGTGAAGG 59.064 45.455 41.74 17.19 43.58 3.46
2709 2873 0.608856 TGCATGCTTACACCACCCAG 60.609 55.000 20.33 0.00 0.00 4.45
2776 2949 0.095245 CACGCGATTCTGCAACGATT 59.905 50.000 15.93 0.00 34.15 3.34
2828 3002 6.226787 TGGCTTCTGTGTTCAAAAAGAAAAA 58.773 32.000 0.00 0.00 38.13 1.94
2829 3003 5.788450 TGGCTTCTGTGTTCAAAAAGAAAA 58.212 33.333 0.00 0.00 38.13 2.29
2830 3004 5.398603 TGGCTTCTGTGTTCAAAAAGAAA 57.601 34.783 0.00 0.00 38.13 2.52
2831 3005 5.350633 CATGGCTTCTGTGTTCAAAAAGAA 58.649 37.500 0.00 0.00 0.00 2.52
2832 3006 4.202141 CCATGGCTTCTGTGTTCAAAAAGA 60.202 41.667 0.00 0.00 0.00 2.52
2833 3007 4.053295 CCATGGCTTCTGTGTTCAAAAAG 58.947 43.478 0.00 0.00 0.00 2.27
2834 3008 3.703556 TCCATGGCTTCTGTGTTCAAAAA 59.296 39.130 6.96 0.00 0.00 1.94
2835 3009 3.295093 TCCATGGCTTCTGTGTTCAAAA 58.705 40.909 6.96 0.00 0.00 2.44
2836 3010 2.942804 TCCATGGCTTCTGTGTTCAAA 58.057 42.857 6.96 0.00 0.00 2.69
2837 3011 2.655090 TCCATGGCTTCTGTGTTCAA 57.345 45.000 6.96 0.00 0.00 2.69
2838 3012 2.158623 ACTTCCATGGCTTCTGTGTTCA 60.159 45.455 6.96 0.00 0.00 3.18
2839 3013 2.508526 ACTTCCATGGCTTCTGTGTTC 58.491 47.619 6.96 0.00 0.00 3.18
2840 3014 2.624838 CAACTTCCATGGCTTCTGTGTT 59.375 45.455 6.96 1.34 0.00 3.32
2841 3015 2.158623 TCAACTTCCATGGCTTCTGTGT 60.159 45.455 6.96 0.00 0.00 3.72
2842 3016 2.507484 TCAACTTCCATGGCTTCTGTG 58.493 47.619 6.96 0.22 0.00 3.66
2843 3017 2.887152 GTTCAACTTCCATGGCTTCTGT 59.113 45.455 6.96 0.00 0.00 3.41
2844 3018 2.886523 TGTTCAACTTCCATGGCTTCTG 59.113 45.455 6.96 2.05 0.00 3.02
2845 3019 3.228188 TGTTCAACTTCCATGGCTTCT 57.772 42.857 6.96 0.00 0.00 2.85
2846 3020 4.320608 TTTGTTCAACTTCCATGGCTTC 57.679 40.909 6.96 0.00 0.00 3.86
2847 3021 4.751767 TTTTGTTCAACTTCCATGGCTT 57.248 36.364 6.96 0.00 0.00 4.35
2848 3022 4.961438 ATTTTGTTCAACTTCCATGGCT 57.039 36.364 6.96 0.00 0.00 4.75
2849 3023 5.299949 AGAATTTTGTTCAACTTCCATGGC 58.700 37.500 6.96 0.00 0.00 4.40
2850 3024 6.144402 CGAAGAATTTTGTTCAACTTCCATGG 59.856 38.462 4.97 4.97 32.83 3.66
2851 3025 6.917477 TCGAAGAATTTTGTTCAACTTCCATG 59.083 34.615 0.00 0.00 32.83 3.66
2852 3026 6.918022 GTCGAAGAATTTTGTTCAACTTCCAT 59.082 34.615 0.00 0.00 39.69 3.41
2853 3027 6.127869 TGTCGAAGAATTTTGTTCAACTTCCA 60.128 34.615 0.00 0.00 39.69 3.53
2854 3028 6.262601 TGTCGAAGAATTTTGTTCAACTTCC 58.737 36.000 0.00 0.00 39.69 3.46
2855 3029 7.484959 ACTTGTCGAAGAATTTTGTTCAACTTC 59.515 33.333 0.00 0.00 39.69 3.01
2863 3037 4.785341 GCGTGACTTGTCGAAGAATTTTGT 60.785 41.667 0.00 0.00 39.69 2.83
2865 3039 3.560068 AGCGTGACTTGTCGAAGAATTTT 59.440 39.130 0.00 0.00 39.69 1.82
2872 3046 1.954146 GGCAGCGTGACTTGTCGAA 60.954 57.895 0.00 0.00 0.00 3.71
2924 3098 1.540267 CACAAGAGCTCAAGCAATGCT 59.460 47.619 17.77 0.00 45.16 3.79
2949 3127 2.895372 GTCGCGGCGGGAAATCAT 60.895 61.111 28.40 0.00 0.00 2.45
3013 3195 0.101399 GTGACGTCTCATCCGCTCAT 59.899 55.000 17.92 0.00 0.00 2.90
3014 3196 1.506718 GTGACGTCTCATCCGCTCA 59.493 57.895 17.92 0.00 0.00 4.26
3015 3197 1.226717 GGTGACGTCTCATCCGCTC 60.227 63.158 17.92 0.00 0.00 5.03
3016 3198 2.885861 GGTGACGTCTCATCCGCT 59.114 61.111 17.92 0.00 0.00 5.52
3042 3229 0.742505 TTCGCCACGGACGATCTAAT 59.257 50.000 0.00 0.00 39.65 1.73
3045 3232 1.153823 CTTTCGCCACGGACGATCT 60.154 57.895 0.00 0.00 39.65 2.75
3158 3406 1.081108 GAGGATCGATCGCCGGAAG 60.081 63.158 18.81 0.00 39.14 3.46
3159 3407 1.826487 TGAGGATCGATCGCCGGAA 60.826 57.895 18.81 0.00 38.61 4.30
3160 3408 2.203294 TGAGGATCGATCGCCGGA 60.203 61.111 18.81 0.00 38.61 5.14
3161 3409 2.049985 GTGAGGATCGATCGCCGG 60.050 66.667 18.81 0.00 38.61 6.13
3176 3424 2.944557 CGGATCGAGTCGCGTGTG 60.945 66.667 7.92 0.00 41.80 3.82
3202 3450 3.411351 GCGCCGAGAGCAACGAAA 61.411 61.111 0.00 0.00 44.04 3.46
3303 3555 2.267006 CGCTGGACATCTGGCACT 59.733 61.111 0.00 0.00 0.00 4.40
3304 3556 2.046892 ACGCTGGACATCTGGCAC 60.047 61.111 0.00 0.00 0.00 5.01
3305 3557 2.046988 CACGCTGGACATCTGGCA 60.047 61.111 0.00 0.00 0.00 4.92
3306 3558 2.821366 CCACGCTGGACATCTGGC 60.821 66.667 0.00 0.00 40.96 4.85
3307 3559 2.821366 GCCACGCTGGACATCTGG 60.821 66.667 8.04 0.00 40.96 3.86
3314 3566 0.975556 TTATCTGAGGCCACGCTGGA 60.976 55.000 5.01 0.00 40.96 3.86
3315 3567 0.811616 GTTATCTGAGGCCACGCTGG 60.812 60.000 5.01 0.25 41.55 4.85
3316 3568 1.148157 CGTTATCTGAGGCCACGCTG 61.148 60.000 5.01 0.00 0.00 5.18
3317 3569 1.141881 CGTTATCTGAGGCCACGCT 59.858 57.895 5.01 0.00 0.00 5.07
3318 3570 1.153628 ACGTTATCTGAGGCCACGC 60.154 57.895 5.01 0.00 34.14 5.34
3319 3571 0.806102 CCACGTTATCTGAGGCCACG 60.806 60.000 5.01 6.77 36.91 4.94
3320 3572 1.090052 GCCACGTTATCTGAGGCCAC 61.090 60.000 5.01 0.00 39.42 5.01
3321 3573 1.220749 GCCACGTTATCTGAGGCCA 59.779 57.895 5.01 0.00 39.42 5.36
3322 3574 4.126524 GCCACGTTATCTGAGGCC 57.873 61.111 0.00 0.00 39.42 5.19
3323 3575 1.883084 CGGCCACGTTATCTGAGGC 60.883 63.158 2.24 2.35 44.48 4.70
3324 3576 4.420143 CGGCCACGTTATCTGAGG 57.580 61.111 2.24 0.00 34.81 3.86
3335 3587 7.718272 TGTGTTTAGATATAAATACGGCCAC 57.282 36.000 13.00 8.09 34.93 5.01
3336 3588 7.094975 GCATGTGTTTAGATATAAATACGGCCA 60.095 37.037 17.51 3.74 34.93 5.36
3337 3589 7.094975 TGCATGTGTTTAGATATAAATACGGCC 60.095 37.037 21.71 0.00 35.38 6.13
3338 3590 7.802738 TGCATGTGTTTAGATATAAATACGGC 58.197 34.615 19.66 19.66 34.93 5.68
3339 3591 9.973246 GATGCATGTGTTTAGATATAAATACGG 57.027 33.333 2.46 9.69 34.93 4.02
3340 3592 9.675553 CGATGCATGTGTTTAGATATAAATACG 57.324 33.333 2.46 3.75 34.93 3.06
3345 3597 8.696175 CGTAACGATGCATGTGTTTAGATATAA 58.304 33.333 16.52 0.00 0.00 0.98
3346 3598 8.077386 TCGTAACGATGCATGTGTTTAGATATA 58.923 33.333 16.52 0.00 0.00 0.86
3347 3599 6.921307 TCGTAACGATGCATGTGTTTAGATAT 59.079 34.615 16.52 0.00 0.00 1.63
3348 3600 6.197655 GTCGTAACGATGCATGTGTTTAGATA 59.802 38.462 16.52 0.00 38.42 1.98
3349 3601 5.005394 GTCGTAACGATGCATGTGTTTAGAT 59.995 40.000 16.52 0.00 38.42 1.98
3350 3602 4.325204 GTCGTAACGATGCATGTGTTTAGA 59.675 41.667 16.52 13.49 38.42 2.10
3351 3603 4.326278 AGTCGTAACGATGCATGTGTTTAG 59.674 41.667 16.52 11.90 38.42 1.85
3352 3604 4.239304 AGTCGTAACGATGCATGTGTTTA 58.761 39.130 16.52 1.59 38.42 2.01
3353 3605 3.064207 AGTCGTAACGATGCATGTGTTT 58.936 40.909 16.52 2.44 38.42 2.83
3354 3606 2.683968 AGTCGTAACGATGCATGTGTT 58.316 42.857 2.46 11.52 38.42 3.32
3355 3607 2.363788 AGTCGTAACGATGCATGTGT 57.636 45.000 2.46 0.00 38.42 3.72
3356 3608 2.923655 AGAAGTCGTAACGATGCATGTG 59.076 45.455 2.46 0.00 38.42 3.21
3357 3609 3.179830 GAGAAGTCGTAACGATGCATGT 58.820 45.455 2.46 0.00 38.42 3.21
3358 3610 2.535984 GGAGAAGTCGTAACGATGCATG 59.464 50.000 2.46 0.00 38.42 4.06
3359 3611 2.165641 TGGAGAAGTCGTAACGATGCAT 59.834 45.455 0.00 0.00 38.42 3.96
3360 3612 1.542472 TGGAGAAGTCGTAACGATGCA 59.458 47.619 0.00 0.00 38.42 3.96
3361 3613 2.273370 TGGAGAAGTCGTAACGATGC 57.727 50.000 0.00 0.00 38.42 3.91
3362 3614 3.834610 AGTTGGAGAAGTCGTAACGATG 58.165 45.455 0.00 0.00 38.42 3.84
3363 3615 4.235360 CAAGTTGGAGAAGTCGTAACGAT 58.765 43.478 0.00 0.00 38.42 3.73
3364 3616 3.067180 ACAAGTTGGAGAAGTCGTAACGA 59.933 43.478 7.96 0.00 0.00 3.85
3365 3617 3.378339 ACAAGTTGGAGAAGTCGTAACG 58.622 45.455 7.96 0.00 0.00 3.18
3366 3618 3.739810 GGACAAGTTGGAGAAGTCGTAAC 59.260 47.826 7.96 0.00 0.00 2.50
3367 3619 3.385433 TGGACAAGTTGGAGAAGTCGTAA 59.615 43.478 7.96 0.00 0.00 3.18
3368 3620 2.960384 TGGACAAGTTGGAGAAGTCGTA 59.040 45.455 7.96 0.00 0.00 3.43
3369 3621 1.760613 TGGACAAGTTGGAGAAGTCGT 59.239 47.619 7.96 0.00 0.00 4.34
3370 3622 2.526304 TGGACAAGTTGGAGAAGTCG 57.474 50.000 7.96 0.00 0.00 4.18
3371 3623 4.200092 ACTTTGGACAAGTTGGAGAAGTC 58.800 43.478 7.96 0.00 0.00 3.01
3372 3624 4.200092 GACTTTGGACAAGTTGGAGAAGT 58.800 43.478 7.96 10.99 0.00 3.01
3373 3625 4.035675 GTGACTTTGGACAAGTTGGAGAAG 59.964 45.833 7.96 8.12 0.00 2.85
3374 3626 3.945285 GTGACTTTGGACAAGTTGGAGAA 59.055 43.478 7.96 0.00 0.00 2.87
3375 3627 3.054728 TGTGACTTTGGACAAGTTGGAGA 60.055 43.478 7.96 0.00 0.00 3.71
3376 3628 3.278574 TGTGACTTTGGACAAGTTGGAG 58.721 45.455 7.96 0.06 0.00 3.86
3377 3629 3.358111 TGTGACTTTGGACAAGTTGGA 57.642 42.857 7.96 0.00 0.00 3.53
3378 3630 3.428862 GGTTGTGACTTTGGACAAGTTGG 60.429 47.826 7.96 0.00 32.81 3.77
3379 3631 3.730662 CGGTTGTGACTTTGGACAAGTTG 60.731 47.826 0.00 0.00 32.81 3.16
3380 3632 2.422127 CGGTTGTGACTTTGGACAAGTT 59.578 45.455 0.00 0.00 32.81 2.66
3381 3633 2.014128 CGGTTGTGACTTTGGACAAGT 58.986 47.619 0.00 0.00 32.81 3.16
3382 3634 2.285083 TCGGTTGTGACTTTGGACAAG 58.715 47.619 0.00 0.00 32.81 3.16
3383 3635 2.404923 TCGGTTGTGACTTTGGACAA 57.595 45.000 0.00 0.00 0.00 3.18
3384 3636 2.404923 TTCGGTTGTGACTTTGGACA 57.595 45.000 0.00 0.00 0.00 4.02
3385 3637 3.982576 ATTTCGGTTGTGACTTTGGAC 57.017 42.857 0.00 0.00 0.00 4.02
3386 3638 3.816523 GGTATTTCGGTTGTGACTTTGGA 59.183 43.478 0.00 0.00 0.00 3.53
3387 3639 3.566322 TGGTATTTCGGTTGTGACTTTGG 59.434 43.478 0.00 0.00 0.00 3.28
3388 3640 4.822036 TGGTATTTCGGTTGTGACTTTG 57.178 40.909 0.00 0.00 0.00 2.77
3389 3641 4.641094 TGTTGGTATTTCGGTTGTGACTTT 59.359 37.500 0.00 0.00 0.00 2.66
3390 3642 4.200874 TGTTGGTATTTCGGTTGTGACTT 58.799 39.130 0.00 0.00 0.00 3.01
3391 3643 3.811083 TGTTGGTATTTCGGTTGTGACT 58.189 40.909 0.00 0.00 0.00 3.41
3392 3644 3.810941 TCTGTTGGTATTTCGGTTGTGAC 59.189 43.478 0.00 0.00 0.00 3.67
3393 3645 4.074627 TCTGTTGGTATTTCGGTTGTGA 57.925 40.909 0.00 0.00 0.00 3.58
3394 3646 4.822036 TTCTGTTGGTATTTCGGTTGTG 57.178 40.909 0.00 0.00 0.00 3.33
3395 3647 5.533154 TGATTTCTGTTGGTATTTCGGTTGT 59.467 36.000 0.00 0.00 0.00 3.32
3396 3648 5.856455 GTGATTTCTGTTGGTATTTCGGTTG 59.144 40.000 0.00 0.00 0.00 3.77
3397 3649 5.533154 TGTGATTTCTGTTGGTATTTCGGTT 59.467 36.000 0.00 0.00 0.00 4.44
3398 3650 5.067273 TGTGATTTCTGTTGGTATTTCGGT 58.933 37.500 0.00 0.00 0.00 4.69
3399 3651 5.621197 TGTGATTTCTGTTGGTATTTCGG 57.379 39.130 0.00 0.00 0.00 4.30
3400 3652 8.161754 GAAATGTGATTTCTGTTGGTATTTCG 57.838 34.615 0.00 0.00 44.00 3.46
3413 3665 7.440556 TGATGCTAGAGCTAGAAATGTGATTTC 59.559 37.037 8.65 0.00 43.96 2.17
3414 3666 7.278135 TGATGCTAGAGCTAGAAATGTGATTT 58.722 34.615 8.65 0.00 42.66 2.17
3415 3667 6.824553 TGATGCTAGAGCTAGAAATGTGATT 58.175 36.000 8.65 0.00 42.66 2.57
3416 3668 6.416631 TGATGCTAGAGCTAGAAATGTGAT 57.583 37.500 8.65 0.00 42.66 3.06
3417 3669 5.859205 TGATGCTAGAGCTAGAAATGTGA 57.141 39.130 8.65 0.00 42.66 3.58
3418 3670 6.915544 TTTGATGCTAGAGCTAGAAATGTG 57.084 37.500 8.65 0.00 42.66 3.21
3419 3671 7.065563 CACTTTTGATGCTAGAGCTAGAAATGT 59.934 37.037 8.65 5.73 42.66 2.71
3420 3672 7.065563 ACACTTTTGATGCTAGAGCTAGAAATG 59.934 37.037 8.65 5.22 42.66 2.32
3421 3673 7.108847 ACACTTTTGATGCTAGAGCTAGAAAT 58.891 34.615 8.65 1.50 42.66 2.17
3422 3674 6.467677 ACACTTTTGATGCTAGAGCTAGAAA 58.532 36.000 8.65 0.00 42.66 2.52
3423 3675 6.042638 ACACTTTTGATGCTAGAGCTAGAA 57.957 37.500 8.65 0.00 42.66 2.10
3424 3676 5.667539 ACACTTTTGATGCTAGAGCTAGA 57.332 39.130 8.65 0.00 42.66 2.43
3425 3677 6.593382 AGAAACACTTTTGATGCTAGAGCTAG 59.407 38.462 2.72 0.13 42.66 3.42
3426 3678 6.467677 AGAAACACTTTTGATGCTAGAGCTA 58.532 36.000 2.72 0.00 42.66 3.32
3427 3679 5.312079 AGAAACACTTTTGATGCTAGAGCT 58.688 37.500 2.72 0.00 42.66 4.09
3428 3680 5.619625 AGAAACACTTTTGATGCTAGAGC 57.380 39.130 0.00 0.00 42.50 4.09
3451 3703 8.785329 ACACTTTTGATGCTAAAAAGGAAAAA 57.215 26.923 17.47 0.00 45.02 1.94
3452 3704 8.663911 CAACACTTTTGATGCTAAAAAGGAAAA 58.336 29.630 17.47 0.00 45.02 2.29
3453 3705 8.037758 TCAACACTTTTGATGCTAAAAAGGAAA 58.962 29.630 17.47 0.00 45.02 3.13
3454 3706 7.491048 GTCAACACTTTTGATGCTAAAAAGGAA 59.509 33.333 17.47 2.83 45.02 3.36
3455 3707 6.978080 GTCAACACTTTTGATGCTAAAAAGGA 59.022 34.615 17.47 7.38 45.02 3.36
3456 3708 6.756074 TGTCAACACTTTTGATGCTAAAAAGG 59.244 34.615 17.47 11.56 45.02 3.11
3457 3709 7.701924 TCTGTCAACACTTTTGATGCTAAAAAG 59.298 33.333 13.85 13.85 45.80 2.27
3458 3710 7.542890 TCTGTCAACACTTTTGATGCTAAAAA 58.457 30.769 0.00 0.00 0.00 1.94
3459 3711 7.094508 TCTGTCAACACTTTTGATGCTAAAA 57.905 32.000 0.00 0.00 0.00 1.52
3460 3712 6.691754 TCTGTCAACACTTTTGATGCTAAA 57.308 33.333 0.00 0.00 0.00 1.85
3461 3713 6.882610 ATCTGTCAACACTTTTGATGCTAA 57.117 33.333 0.00 0.00 0.00 3.09
3462 3714 8.565896 AATATCTGTCAACACTTTTGATGCTA 57.434 30.769 0.00 0.00 0.00 3.49
3463 3715 7.458409 AATATCTGTCAACACTTTTGATGCT 57.542 32.000 0.00 0.00 0.00 3.79
3464 3716 9.065871 GTAAATATCTGTCAACACTTTTGATGC 57.934 33.333 0.00 0.00 0.00 3.91
3465 3717 9.559958 GGTAAATATCTGTCAACACTTTTGATG 57.440 33.333 0.00 0.00 0.00 3.07
3466 3718 8.739972 GGGTAAATATCTGTCAACACTTTTGAT 58.260 33.333 0.00 0.00 0.00 2.57
3467 3719 7.094975 CGGGTAAATATCTGTCAACACTTTTGA 60.095 37.037 0.00 0.00 0.00 2.69
3468 3720 7.021196 CGGGTAAATATCTGTCAACACTTTTG 58.979 38.462 0.00 0.00 0.00 2.44
3469 3721 6.938030 TCGGGTAAATATCTGTCAACACTTTT 59.062 34.615 0.00 0.00 0.00 2.27
3470 3722 6.469410 TCGGGTAAATATCTGTCAACACTTT 58.531 36.000 0.00 0.00 0.00 2.66
3471 3723 6.045072 TCGGGTAAATATCTGTCAACACTT 57.955 37.500 0.00 0.00 0.00 3.16
3472 3724 5.421056 TCTCGGGTAAATATCTGTCAACACT 59.579 40.000 0.00 0.00 0.00 3.55
3473 3725 5.519206 GTCTCGGGTAAATATCTGTCAACAC 59.481 44.000 0.00 0.00 0.00 3.32
3474 3726 5.186215 TGTCTCGGGTAAATATCTGTCAACA 59.814 40.000 0.00 0.00 0.00 3.33
3475 3727 5.657474 TGTCTCGGGTAAATATCTGTCAAC 58.343 41.667 0.00 0.00 0.00 3.18
3476 3728 5.925506 TGTCTCGGGTAAATATCTGTCAA 57.074 39.130 0.00 0.00 0.00 3.18
3477 3729 5.925506 TTGTCTCGGGTAAATATCTGTCA 57.074 39.130 0.00 0.00 0.00 3.58
3478 3730 7.787725 ATTTTGTCTCGGGTAAATATCTGTC 57.212 36.000 0.00 0.00 0.00 3.51
3479 3731 9.847224 ATTATTTTGTCTCGGGTAAATATCTGT 57.153 29.630 0.00 0.00 0.00 3.41
3482 3734 9.394477 GCAATTATTTTGTCTCGGGTAAATATC 57.606 33.333 0.00 0.00 0.00 1.63
3483 3735 9.131791 AGCAATTATTTTGTCTCGGGTAAATAT 57.868 29.630 0.00 0.00 0.00 1.28
3484 3736 8.514330 AGCAATTATTTTGTCTCGGGTAAATA 57.486 30.769 0.00 0.00 0.00 1.40
3485 3737 7.404671 AGCAATTATTTTGTCTCGGGTAAAT 57.595 32.000 0.00 0.00 0.00 1.40
3486 3738 6.827586 AGCAATTATTTTGTCTCGGGTAAA 57.172 33.333 0.00 0.00 0.00 2.01
3487 3739 6.879993 TGTAGCAATTATTTTGTCTCGGGTAA 59.120 34.615 0.00 0.00 0.00 2.85
3488 3740 6.408035 TGTAGCAATTATTTTGTCTCGGGTA 58.592 36.000 0.00 0.00 0.00 3.69
3489 3741 5.250200 TGTAGCAATTATTTTGTCTCGGGT 58.750 37.500 0.00 0.00 0.00 5.28
3490 3742 5.811399 TGTAGCAATTATTTTGTCTCGGG 57.189 39.130 0.00 0.00 0.00 5.14
3491 3743 7.251704 AGATGTAGCAATTATTTTGTCTCGG 57.748 36.000 0.00 0.00 0.00 4.63
3492 3744 9.559958 AAAAGATGTAGCAATTATTTTGTCTCG 57.440 29.630 0.00 0.00 0.00 4.04
3496 3748 9.128107 CGACAAAAGATGTAGCAATTATTTTGT 57.872 29.630 11.61 11.61 46.33 2.83
3497 3749 9.128107 ACGACAAAAGATGTAGCAATTATTTTG 57.872 29.630 0.00 0.00 44.12 2.44
3498 3750 9.128107 CACGACAAAAGATGTAGCAATTATTTT 57.872 29.630 0.00 0.00 44.12 1.82
3499 3751 8.296713 ACACGACAAAAGATGTAGCAATTATTT 58.703 29.630 0.00 0.00 44.12 1.40
3500 3752 7.816640 ACACGACAAAAGATGTAGCAATTATT 58.183 30.769 0.00 0.00 44.12 1.40
3501 3753 7.377766 ACACGACAAAAGATGTAGCAATTAT 57.622 32.000 0.00 0.00 44.12 1.28
3502 3754 6.795098 ACACGACAAAAGATGTAGCAATTA 57.205 33.333 0.00 0.00 44.12 1.40
3503 3755 5.689383 ACACGACAAAAGATGTAGCAATT 57.311 34.783 0.00 0.00 44.12 2.32
3504 3756 5.689383 AACACGACAAAAGATGTAGCAAT 57.311 34.783 0.00 0.00 44.12 3.56
3505 3757 6.795098 ATAACACGACAAAAGATGTAGCAA 57.205 33.333 0.00 0.00 44.12 3.91
3506 3758 6.425417 TCAATAACACGACAAAAGATGTAGCA 59.575 34.615 0.00 0.00 44.12 3.49
3507 3759 6.827641 TCAATAACACGACAAAAGATGTAGC 58.172 36.000 0.00 0.00 44.12 3.58
3508 3760 8.655970 TCATCAATAACACGACAAAAGATGTAG 58.344 33.333 0.00 0.00 44.12 2.74
3509 3761 8.440059 GTCATCAATAACACGACAAAAGATGTA 58.560 33.333 0.00 0.00 44.12 2.29
3511 3763 6.462636 CGTCATCAATAACACGACAAAAGATG 59.537 38.462 0.00 0.00 34.06 2.90
3512 3764 6.147164 ACGTCATCAATAACACGACAAAAGAT 59.853 34.615 0.00 0.00 36.14 2.40
3513 3765 5.464057 ACGTCATCAATAACACGACAAAAGA 59.536 36.000 0.00 0.00 36.14 2.52
3514 3766 5.675970 ACGTCATCAATAACACGACAAAAG 58.324 37.500 0.00 0.00 36.14 2.27
3515 3767 5.660629 ACGTCATCAATAACACGACAAAA 57.339 34.783 0.00 0.00 36.14 2.44
3516 3768 5.660629 AACGTCATCAATAACACGACAAA 57.339 34.783 0.00 0.00 36.14 2.83
3517 3769 5.118971 GGTAACGTCATCAATAACACGACAA 59.881 40.000 0.00 0.00 36.14 3.18
3518 3770 4.622313 GGTAACGTCATCAATAACACGACA 59.378 41.667 0.00 0.00 36.14 4.35
3519 3771 5.122328 GGTAACGTCATCAATAACACGAC 57.878 43.478 0.00 0.00 36.14 4.34
3536 3788 3.189285 TCATACTTTTAGCGCCGGTAAC 58.811 45.455 8.44 0.00 0.00 2.50
3537 3789 3.523606 TCATACTTTTAGCGCCGGTAA 57.476 42.857 2.29 4.40 0.00 2.85
3538 3790 3.523606 TTCATACTTTTAGCGCCGGTA 57.476 42.857 2.29 0.00 0.00 4.02
3539 3791 2.389962 TTCATACTTTTAGCGCCGGT 57.610 45.000 2.29 0.00 0.00 5.28
3540 3792 2.676342 AGTTTCATACTTTTAGCGCCGG 59.324 45.455 2.29 0.00 31.29 6.13
3541 3793 3.485216 CCAGTTTCATACTTTTAGCGCCG 60.485 47.826 2.29 0.00 33.85 6.46
3542 3794 3.439129 ACCAGTTTCATACTTTTAGCGCC 59.561 43.478 2.29 0.00 33.85 6.53
3543 3795 4.680171 ACCAGTTTCATACTTTTAGCGC 57.320 40.909 0.00 0.00 33.85 5.92
3544 3796 7.548673 GAAAACCAGTTTCATACTTTTAGCG 57.451 36.000 0.00 0.00 44.42 4.26
3557 3809 9.612066 ACATTATGTCATTTTGAAAACCAGTTT 57.388 25.926 0.00 0.00 0.00 2.66
3559 3811 9.691362 GTACATTATGTCATTTTGAAAACCAGT 57.309 29.630 0.00 0.00 0.00 4.00
3560 3812 9.689976 TGTACATTATGTCATTTTGAAAACCAG 57.310 29.630 0.00 0.00 0.00 4.00
3567 3819 9.454859 TGTACCATGTACATTATGTCATTTTGA 57.545 29.630 5.37 0.00 0.00 2.69
3597 3849 9.093458 ACTCATTGGACTTTCCTTTAATCAATT 57.907 29.630 0.00 0.00 37.46 2.32
3598 3850 8.655935 ACTCATTGGACTTTCCTTTAATCAAT 57.344 30.769 0.00 0.00 37.46 2.57
3599 3851 7.176690 GGACTCATTGGACTTTCCTTTAATCAA 59.823 37.037 0.00 0.00 37.46 2.57
3600 3852 6.659242 GGACTCATTGGACTTTCCTTTAATCA 59.341 38.462 0.00 0.00 37.46 2.57
3601 3853 6.887002 AGGACTCATTGGACTTTCCTTTAATC 59.113 38.462 0.00 0.00 37.46 1.75
3602 3854 6.794534 AGGACTCATTGGACTTTCCTTTAAT 58.205 36.000 0.00 0.00 37.46 1.40
3603 3855 6.200878 AGGACTCATTGGACTTTCCTTTAA 57.799 37.500 0.00 0.00 37.46 1.52
3604 3856 5.568825 CGAGGACTCATTGGACTTTCCTTTA 60.569 44.000 0.00 0.00 37.46 1.85
3605 3857 4.657013 GAGGACTCATTGGACTTTCCTTT 58.343 43.478 0.00 0.00 37.46 3.11
3606 3858 3.307059 CGAGGACTCATTGGACTTTCCTT 60.307 47.826 0.00 0.00 37.46 3.36
3607 3859 2.234908 CGAGGACTCATTGGACTTTCCT 59.765 50.000 0.00 0.00 37.46 3.36
3608 3860 2.028020 ACGAGGACTCATTGGACTTTCC 60.028 50.000 0.00 0.00 36.96 3.13
3609 3861 2.996621 CACGAGGACTCATTGGACTTTC 59.003 50.000 0.00 0.00 0.00 2.62
3610 3862 2.632996 TCACGAGGACTCATTGGACTTT 59.367 45.455 0.00 0.00 0.00 2.66
3611 3863 2.248248 TCACGAGGACTCATTGGACTT 58.752 47.619 0.00 0.00 0.00 3.01
3612 3864 1.924731 TCACGAGGACTCATTGGACT 58.075 50.000 0.00 0.00 0.00 3.85
3613 3865 2.166459 TCATCACGAGGACTCATTGGAC 59.834 50.000 0.00 0.00 0.00 4.02
3614 3866 2.456577 TCATCACGAGGACTCATTGGA 58.543 47.619 0.00 0.00 0.00 3.53
3615 3867 2.967599 TCATCACGAGGACTCATTGG 57.032 50.000 0.00 0.00 0.00 3.16
3616 3868 7.488187 AAATTATCATCACGAGGACTCATTG 57.512 36.000 0.00 0.00 0.00 2.82
3617 3869 7.770433 TCAAAATTATCATCACGAGGACTCATT 59.230 33.333 0.00 0.00 0.00 2.57
3618 3870 7.275183 TCAAAATTATCATCACGAGGACTCAT 58.725 34.615 0.00 0.00 0.00 2.90
3619 3871 6.639563 TCAAAATTATCATCACGAGGACTCA 58.360 36.000 0.00 0.00 0.00 3.41
3620 3872 7.402640 GTTCAAAATTATCATCACGAGGACTC 58.597 38.462 0.00 0.00 0.00 3.36
3621 3873 6.316390 GGTTCAAAATTATCATCACGAGGACT 59.684 38.462 0.00 0.00 0.00 3.85
3622 3874 6.093495 TGGTTCAAAATTATCATCACGAGGAC 59.907 38.462 0.00 0.00 0.00 3.85
3623 3875 6.176896 TGGTTCAAAATTATCATCACGAGGA 58.823 36.000 0.00 0.00 0.00 3.71
3624 3876 6.435430 TGGTTCAAAATTATCATCACGAGG 57.565 37.500 0.00 0.00 0.00 4.63
3625 3877 5.967674 GCTGGTTCAAAATTATCATCACGAG 59.032 40.000 0.00 0.00 0.00 4.18
3626 3878 5.447144 CGCTGGTTCAAAATTATCATCACGA 60.447 40.000 0.00 0.00 0.00 4.35
3627 3879 4.730042 CGCTGGTTCAAAATTATCATCACG 59.270 41.667 0.00 0.00 0.00 4.35
3628 3880 5.640732 ACGCTGGTTCAAAATTATCATCAC 58.359 37.500 0.00 0.00 0.00 3.06
3629 3881 5.895636 ACGCTGGTTCAAAATTATCATCA 57.104 34.783 0.00 0.00 0.00 3.07
3630 3882 6.454186 GCAAACGCTGGTTCAAAATTATCATC 60.454 38.462 0.00 0.00 34.62 2.92
3631 3883 5.348451 GCAAACGCTGGTTCAAAATTATCAT 59.652 36.000 0.00 0.00 34.62 2.45
3632 3884 4.683781 GCAAACGCTGGTTCAAAATTATCA 59.316 37.500 0.00 0.00 34.62 2.15
3633 3885 4.923281 AGCAAACGCTGGTTCAAAATTATC 59.077 37.500 0.00 0.00 38.67 1.75
3634 3886 4.881920 AGCAAACGCTGGTTCAAAATTAT 58.118 34.783 0.00 0.00 38.67 1.28
3635 3887 4.314740 AGCAAACGCTGGTTCAAAATTA 57.685 36.364 0.00 0.00 38.67 1.40
3636 3888 3.177997 AGCAAACGCTGGTTCAAAATT 57.822 38.095 0.00 0.00 38.67 1.82
3637 3889 2.888834 AGCAAACGCTGGTTCAAAAT 57.111 40.000 0.00 0.00 38.67 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.