Multiple sequence alignment - TraesCS7D01G488700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G488700 chr7D 100.000 3779 0 0 1 3779 598611948 598615726 0.000000e+00 6979.0
1 TraesCS7D01G488700 chr7D 74.554 672 157 11 29 693 567291080 567291744 7.990000e-72 281.0
2 TraesCS7D01G488700 chr7D 94.505 91 4 1 2066 2155 22964251 22964341 5.090000e-29 139.0
3 TraesCS7D01G488700 chr7D 89.720 107 8 2 2064 2168 448337053 448336948 2.370000e-27 134.0
4 TraesCS7D01G488700 chr7A 89.081 2079 188 22 6 2074 691128019 691130068 0.000000e+00 2545.0
5 TraesCS7D01G488700 chr7A 93.723 462 21 5 2605 3065 691130462 691130916 0.000000e+00 686.0
6 TraesCS7D01G488700 chr7A 78.512 484 101 3 82 563 16296288 16296770 7.880000e-82 315.0
7 TraesCS7D01G488700 chr7B 91.915 705 38 6 805 1499 678028481 678029176 0.000000e+00 968.0
8 TraesCS7D01G488700 chr7B 85.530 774 54 19 2605 3333 678030310 678031070 0.000000e+00 756.0
9 TraesCS7D01G488700 chr7B 79.310 609 73 25 1492 2074 678029348 678029929 9.910000e-101 377.0
10 TraesCS7D01G488700 chr7B 74.298 677 132 24 29 691 621000069 621000717 8.110000e-62 248.0
11 TraesCS7D01G488700 chr5B 88.251 732 67 8 1353 2074 499899438 499898716 0.000000e+00 857.0
12 TraesCS7D01G488700 chr5B 77.427 443 93 7 154 593 223132147 223131709 1.350000e-64 257.0
13 TraesCS7D01G488700 chr5B 96.512 86 3 0 2154 2239 499898719 499898634 3.930000e-30 143.0
14 TraesCS7D01G488700 chr4B 88.251 732 67 8 1353 2074 668535671 668534949 0.000000e+00 857.0
15 TraesCS7D01G488700 chr4B 87.978 732 69 9 1353 2074 669494743 669494021 0.000000e+00 846.0
16 TraesCS7D01G488700 chr4B 87.671 730 71 8 1353 2072 668916472 668915752 0.000000e+00 832.0
17 TraesCS7D01G488700 chr4B 86.343 659 58 14 999 1632 41177252 41177903 0.000000e+00 689.0
18 TraesCS7D01G488700 chr4B 87.021 470 51 8 2608 3075 81364247 81363786 4.330000e-144 521.0
19 TraesCS7D01G488700 chr4B 75.370 540 118 12 156 687 3707499 3708031 2.920000e-61 246.0
20 TraesCS7D01G488700 chr4B 92.908 141 6 4 1101 1239 81365491 81365353 6.400000e-48 202.0
21 TraesCS7D01G488700 chr4B 97.674 86 2 0 2154 2239 668534952 668534867 8.460000e-32 148.0
22 TraesCS7D01G488700 chr4B 97.674 86 2 0 2154 2239 669494024 669493939 8.460000e-32 148.0
23 TraesCS7D01G488700 chr4B 97.590 83 2 0 2157 2239 668915750 668915668 3.930000e-30 143.0
24 TraesCS7D01G488700 chr4B 95.455 88 4 0 2071 2158 106975942 106975855 1.420000e-29 141.0
25 TraesCS7D01G488700 chr4B 90.909 77 7 0 1237 1313 668535754 668535678 1.860000e-18 104.0
26 TraesCS7D01G488700 chr4B 89.610 77 8 0 1237 1313 668916555 668916479 8.640000e-17 99.0
27 TraesCS7D01G488700 chr4B 89.610 77 8 0 1237 1313 669494826 669494750 8.640000e-17 99.0
28 TraesCS7D01G488700 chr5D 87.860 659 50 15 999 1632 12360657 12361310 0.000000e+00 747.0
29 TraesCS7D01G488700 chr2D 87.613 662 52 15 999 1635 29677344 29676688 0.000000e+00 741.0
30 TraesCS7D01G488700 chr2D 84.037 545 66 13 1534 2062 462618269 462618808 4.360000e-139 505.0
31 TraesCS7D01G488700 chr2D 97.701 87 2 0 2071 2157 14895276 14895362 2.350000e-32 150.0
32 TraesCS7D01G488700 chr1D 87.595 661 54 15 999 1635 359551135 359550479 0.000000e+00 741.0
33 TraesCS7D01G488700 chr1D 77.279 735 128 26 19 737 49433732 49434443 2.740000e-106 396.0
34 TraesCS7D01G488700 chr1D 78.809 571 110 9 29 594 235988175 235987611 1.280000e-99 374.0
35 TraesCS7D01G488700 chr4D 88.699 469 43 7 2608 3075 54807696 54808155 7.090000e-157 564.0
36 TraesCS7D01G488700 chr4D 85.000 280 36 5 1740 2015 54807002 54807279 2.870000e-71 279.0
37 TraesCS7D01G488700 chr4D 92.806 139 8 2 1101 1239 54806424 54806560 2.300000e-47 200.0
38 TraesCS7D01G488700 chr4D 75.599 459 76 28 2153 2599 54807321 54807755 1.070000e-45 195.0
39 TraesCS7D01G488700 chr4D 96.629 89 3 0 2068 2156 478671939 478671851 8.460000e-32 148.0
40 TraesCS7D01G488700 chr4D 79.333 150 22 5 1 144 64209795 64209649 3.110000e-16 97.1
41 TraesCS7D01G488700 chr4A 84.829 468 43 8 2608 3075 542264790 542264351 2.680000e-121 446.0
42 TraesCS7D01G488700 chr4A 81.341 343 49 9 1741 2074 542265498 542265162 8.050000e-67 265.0
43 TraesCS7D01G488700 chr4A 94.928 138 5 2 1101 1238 542266091 542265956 8.220000e-52 215.0
44 TraesCS7D01G488700 chr1A 75.403 496 110 11 76 563 14649516 14650007 2.940000e-56 230.0
45 TraesCS7D01G488700 chr1A 74.141 495 118 9 76 562 14651153 14651645 2.980000e-46 196.0
46 TraesCS7D01G488700 chr6D 91.589 107 7 2 2071 2177 340997474 340997370 3.040000e-31 147.0
47 TraesCS7D01G488700 chr6D 93.684 95 6 0 2065 2159 309072498 309072592 3.930000e-30 143.0
48 TraesCS7D01G488700 chr3D 97.647 85 2 0 2071 2155 384726625 384726709 3.040000e-31 147.0
49 TraesCS7D01G488700 chr2A 93.548 93 6 0 2071 2163 338279379 338279287 5.090000e-29 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G488700 chr7D 598611948 598615726 3778 False 6979.000000 6979 100.000000 1 3779 1 chr7D.!!$F3 3778
1 TraesCS7D01G488700 chr7D 567291080 567291744 664 False 281.000000 281 74.554000 29 693 1 chr7D.!!$F2 664
2 TraesCS7D01G488700 chr7A 691128019 691130916 2897 False 1615.500000 2545 91.402000 6 3065 2 chr7A.!!$F2 3059
3 TraesCS7D01G488700 chr7B 678028481 678031070 2589 False 700.333333 968 85.585000 805 3333 3 chr7B.!!$F2 2528
4 TraesCS7D01G488700 chr7B 621000069 621000717 648 False 248.000000 248 74.298000 29 691 1 chr7B.!!$F1 662
5 TraesCS7D01G488700 chr5B 499898634 499899438 804 True 500.000000 857 92.381500 1353 2239 2 chr5B.!!$R2 886
6 TraesCS7D01G488700 chr4B 41177252 41177903 651 False 689.000000 689 86.343000 999 1632 1 chr4B.!!$F2 633
7 TraesCS7D01G488700 chr4B 668534867 668535754 887 True 369.666667 857 92.278000 1237 2239 3 chr4B.!!$R3 1002
8 TraesCS7D01G488700 chr4B 669493939 669494826 887 True 364.333333 846 91.754000 1237 2239 3 chr4B.!!$R5 1002
9 TraesCS7D01G488700 chr4B 81363786 81365491 1705 True 361.500000 521 89.964500 1101 3075 2 chr4B.!!$R2 1974
10 TraesCS7D01G488700 chr4B 668915668 668916555 887 True 358.000000 832 91.623667 1237 2239 3 chr4B.!!$R4 1002
11 TraesCS7D01G488700 chr4B 3707499 3708031 532 False 246.000000 246 75.370000 156 687 1 chr4B.!!$F1 531
12 TraesCS7D01G488700 chr5D 12360657 12361310 653 False 747.000000 747 87.860000 999 1632 1 chr5D.!!$F1 633
13 TraesCS7D01G488700 chr2D 29676688 29677344 656 True 741.000000 741 87.613000 999 1635 1 chr2D.!!$R1 636
14 TraesCS7D01G488700 chr2D 462618269 462618808 539 False 505.000000 505 84.037000 1534 2062 1 chr2D.!!$F2 528
15 TraesCS7D01G488700 chr1D 359550479 359551135 656 True 741.000000 741 87.595000 999 1635 1 chr1D.!!$R2 636
16 TraesCS7D01G488700 chr1D 49433732 49434443 711 False 396.000000 396 77.279000 19 737 1 chr1D.!!$F1 718
17 TraesCS7D01G488700 chr1D 235987611 235988175 564 True 374.000000 374 78.809000 29 594 1 chr1D.!!$R1 565
18 TraesCS7D01G488700 chr4D 54806424 54808155 1731 False 309.500000 564 85.526000 1101 3075 4 chr4D.!!$F1 1974
19 TraesCS7D01G488700 chr4A 542264351 542266091 1740 True 308.666667 446 87.032667 1101 3075 3 chr4A.!!$R1 1974
20 TraesCS7D01G488700 chr1A 14649516 14651645 2129 False 213.000000 230 74.772000 76 563 2 chr1A.!!$F1 487

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
74 75 0.248907 TCGACGAGGCGATCAATTCC 60.249 55.0 0.00 0.00 35.01 3.01 F
2035 4027 0.250727 GTGAGTGGGCTGCCAAGTAA 60.251 55.0 22.05 1.52 0.00 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2071 4063 0.042131 TGTTATGGGACGGAGGGAGT 59.958 55.0 0.00 0.00 0.00 3.85 R
3691 5812 0.040958 CACCTCAACGAGCAACTTGC 60.041 55.0 5.55 5.55 45.46 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 0.248907 TCGACGAGGCGATCAATTCC 60.249 55.000 0.00 0.00 35.01 3.01
79 80 0.595095 GAGGCGATCAATTCCATGGC 59.405 55.000 6.96 0.00 0.00 4.40
93 94 0.670162 CATGGCCGGTGATGGATTTC 59.330 55.000 1.90 0.00 0.00 2.17
120 121 1.527433 GCCTGTTCAAGTGGGGAAGC 61.527 60.000 0.00 0.00 0.00 3.86
193 194 1.897137 TGACGACGTCTGCTCCAGT 60.897 57.895 26.86 1.48 33.15 4.00
340 356 1.883084 CGTCTTAGTCATGCGGGGC 60.883 63.158 0.00 0.00 0.00 5.80
350 366 0.886490 CATGCGGGGCTGTTAGATCC 60.886 60.000 0.00 0.00 0.00 3.36
369 411 1.459592 CCGGAGTTTGATGACGTGTTC 59.540 52.381 0.00 0.00 0.00 3.18
370 412 1.124297 CGGAGTTTGATGACGTGTTCG 59.876 52.381 0.00 0.00 43.34 3.95
386 2058 1.138266 GTTCGAAGTGCTGCCCCTATA 59.862 52.381 0.00 0.00 0.00 1.31
440 2112 3.717294 GTCACCATGGAGGCCCGT 61.717 66.667 21.47 0.00 43.14 5.28
514 2186 6.953520 TGATCCATCATTTTTCCTTTAGTGGT 59.046 34.615 0.00 0.00 0.00 4.16
516 2188 5.414454 TCCATCATTTTTCCTTTAGTGGTCG 59.586 40.000 0.00 0.00 0.00 4.79
546 2218 4.742201 CGAGGCAGGTGACGGGTG 62.742 72.222 0.00 0.00 0.00 4.61
554 2226 1.890510 GGTGACGGGTGTTGGTGTC 60.891 63.158 0.00 0.00 0.00 3.67
560 2232 0.661020 CGGGTGTTGGTGTCAAACTC 59.339 55.000 0.00 0.00 34.28 3.01
561 2233 1.757682 GGGTGTTGGTGTCAAACTCA 58.242 50.000 0.00 0.00 34.28 3.41
569 2241 2.176798 TGGTGTCAAACTCAGGGGATTT 59.823 45.455 0.00 0.00 0.00 2.17
570 2242 3.396276 TGGTGTCAAACTCAGGGGATTTA 59.604 43.478 0.00 0.00 0.00 1.40
611 2283 8.885494 TTTTATTTCCCTTTTTGACTGATGTG 57.115 30.769 0.00 0.00 0.00 3.21
613 2285 5.514274 TTTCCCTTTTTGACTGATGTGTC 57.486 39.130 0.00 0.00 37.47 3.67
620 2296 3.969117 TTGACTGATGTGTCTTTGTGC 57.031 42.857 0.00 0.00 37.79 4.57
633 2309 0.591170 TTTGTGCAAAGACTAGCGGC 59.409 50.000 0.00 0.00 0.00 6.53
637 2313 2.754995 GCAAAGACTAGCGGCCTGC 61.755 63.158 11.02 11.02 46.98 4.85
650 2326 1.409064 CGGCCTGCTGTCTTATGAGTA 59.591 52.381 0.00 0.00 0.00 2.59
657 2333 5.752472 CCTGCTGTCTTATGAGTATTGTCAG 59.248 44.000 0.00 0.00 0.00 3.51
670 2346 1.991121 TTGTCAGGTCGGTGTCTACT 58.009 50.000 0.00 0.00 0.00 2.57
673 2349 1.067776 GTCAGGTCGGTGTCTACTTGG 60.068 57.143 0.00 0.00 0.00 3.61
771 2449 7.669089 TGGTTTGATTTTTCTAGAGGGTTTT 57.331 32.000 0.00 0.00 0.00 2.43
773 2451 6.929049 GGTTTGATTTTTCTAGAGGGTTTTGG 59.071 38.462 0.00 0.00 0.00 3.28
776 2454 7.669089 TGATTTTTCTAGAGGGTTTTGGTTT 57.331 32.000 0.00 0.00 0.00 3.27
790 2468 6.478673 GGGTTTTGGTTTGATTTTGTAGTGAG 59.521 38.462 0.00 0.00 0.00 3.51
847 2525 2.708325 GAGGACAAGGCCCATTAGATCT 59.292 50.000 0.00 0.00 0.00 2.75
859 2537 2.281539 TTAGATCTATCGGACGGCCA 57.718 50.000 8.76 0.00 0.00 5.36
905 2591 1.136500 CGCTACCTCAACCCTAACCTC 59.864 57.143 0.00 0.00 0.00 3.85
919 2605 3.841255 CCTAACCTCTTCCAGTTTCTCCT 59.159 47.826 0.00 0.00 0.00 3.69
975 2661 1.450491 CGGAGAGACGCCAGAGAGA 60.450 63.158 0.00 0.00 0.00 3.10
1090 2782 3.214328 GTGATTCTTCTTGTGTGGTGGT 58.786 45.455 0.00 0.00 0.00 4.16
1393 3106 1.034838 TTGCTTCGGTTGGCTGTTGT 61.035 50.000 0.00 0.00 0.00 3.32
1418 3131 1.610522 GCTGAGTGATTGTGCCTGTTT 59.389 47.619 0.00 0.00 0.00 2.83
1561 3473 5.062809 GGTATGCGAAAATCTCTATGCTAGC 59.937 44.000 8.10 8.10 0.00 3.42
1574 3486 3.572632 ATGCTAGCACCAATGTCTGAT 57.427 42.857 22.07 0.00 0.00 2.90
1632 3551 6.364568 TCTGTGGATCCATCGAATCATATT 57.635 37.500 19.62 0.00 0.00 1.28
1643 3563 6.591834 CCATCGAATCATATTTCTACTGGACC 59.408 42.308 0.00 0.00 0.00 4.46
1647 3567 7.069455 TCGAATCATATTTCTACTGGACCTTCA 59.931 37.037 0.00 0.00 0.00 3.02
1680 3621 2.745281 GTGCTGCCACGTTCCTTTTATA 59.255 45.455 0.00 0.00 31.34 0.98
1681 3622 3.377172 GTGCTGCCACGTTCCTTTTATAT 59.623 43.478 0.00 0.00 31.34 0.86
1682 3623 4.573201 GTGCTGCCACGTTCCTTTTATATA 59.427 41.667 0.00 0.00 31.34 0.86
1685 3626 6.320164 TGCTGCCACGTTCCTTTTATATAATT 59.680 34.615 0.00 0.00 0.00 1.40
1706 3649 7.452880 AATTTAAGCTGCTGATTGTCTTGTA 57.547 32.000 1.35 0.00 0.00 2.41
1840 3818 2.806244 GTGTTATCTGTTGCAGGACGTT 59.194 45.455 0.00 0.00 31.51 3.99
1947 3927 7.158021 GCTACTGGATTAGCATTAGATGTTCT 58.842 38.462 0.00 0.00 43.52 3.01
1966 3946 5.691305 TGTTCTTTTGCTAACATCACATTGC 59.309 36.000 0.00 0.00 30.88 3.56
2015 4004 7.094805 TGCTATTTTTGTAAGTGAGCTGGTAAG 60.095 37.037 0.00 0.00 0.00 2.34
2035 4027 0.250727 GTGAGTGGGCTGCCAAGTAA 60.251 55.000 22.05 1.52 0.00 2.24
2037 4029 1.133637 TGAGTGGGCTGCCAAGTAAAA 60.134 47.619 22.05 0.00 0.00 1.52
2047 4039 4.726416 CTGCCAAGTAAAAGTGCATAGTG 58.274 43.478 0.00 0.00 0.00 2.74
2069 4061 7.417612 AGTGTATTCTACTGCTTTGTGTTTTG 58.582 34.615 0.00 0.00 0.00 2.44
2070 4062 7.067008 AGTGTATTCTACTGCTTTGTGTTTTGT 59.933 33.333 0.00 0.00 0.00 2.83
2071 4063 8.339714 GTGTATTCTACTGCTTTGTGTTTTGTA 58.660 33.333 0.00 0.00 0.00 2.41
2072 4064 8.339714 TGTATTCTACTGCTTTGTGTTTTGTAC 58.660 33.333 0.00 0.00 0.00 2.90
2073 4065 6.995511 TTCTACTGCTTTGTGTTTTGTACT 57.004 33.333 0.00 0.00 0.00 2.73
2074 4066 6.598753 TCTACTGCTTTGTGTTTTGTACTC 57.401 37.500 0.00 0.00 0.00 2.59
2075 4067 4.632538 ACTGCTTTGTGTTTTGTACTCC 57.367 40.909 0.00 0.00 0.00 3.85
2076 4068 3.380320 ACTGCTTTGTGTTTTGTACTCCC 59.620 43.478 0.00 0.00 0.00 4.30
2077 4069 3.626930 TGCTTTGTGTTTTGTACTCCCT 58.373 40.909 0.00 0.00 0.00 4.20
2078 4070 3.630312 TGCTTTGTGTTTTGTACTCCCTC 59.370 43.478 0.00 0.00 0.00 4.30
2079 4071 3.004419 GCTTTGTGTTTTGTACTCCCTCC 59.996 47.826 0.00 0.00 0.00 4.30
2080 4072 2.536761 TGTGTTTTGTACTCCCTCCG 57.463 50.000 0.00 0.00 0.00 4.63
2081 4073 1.764134 TGTGTTTTGTACTCCCTCCGT 59.236 47.619 0.00 0.00 0.00 4.69
2082 4074 2.224113 TGTGTTTTGTACTCCCTCCGTC 60.224 50.000 0.00 0.00 0.00 4.79
2083 4075 1.345415 TGTTTTGTACTCCCTCCGTCC 59.655 52.381 0.00 0.00 0.00 4.79
2084 4076 0.978907 TTTTGTACTCCCTCCGTCCC 59.021 55.000 0.00 0.00 0.00 4.46
2085 4077 0.178926 TTTGTACTCCCTCCGTCCCA 60.179 55.000 0.00 0.00 0.00 4.37
2086 4078 0.042131 TTGTACTCCCTCCGTCCCAT 59.958 55.000 0.00 0.00 0.00 4.00
2087 4079 0.928505 TGTACTCCCTCCGTCCCATA 59.071 55.000 0.00 0.00 0.00 2.74
2088 4080 1.288633 TGTACTCCCTCCGTCCCATAA 59.711 52.381 0.00 0.00 0.00 1.90
2089 4081 1.685517 GTACTCCCTCCGTCCCATAAC 59.314 57.143 0.00 0.00 0.00 1.89
2090 4082 0.042131 ACTCCCTCCGTCCCATAACA 59.958 55.000 0.00 0.00 0.00 2.41
2091 4083 1.344087 ACTCCCTCCGTCCCATAACAT 60.344 52.381 0.00 0.00 0.00 2.71
2092 4084 2.090943 ACTCCCTCCGTCCCATAACATA 60.091 50.000 0.00 0.00 0.00 2.29
2093 4085 2.969950 CTCCCTCCGTCCCATAACATAA 59.030 50.000 0.00 0.00 0.00 1.90
2094 4086 2.969950 TCCCTCCGTCCCATAACATAAG 59.030 50.000 0.00 0.00 0.00 1.73
2095 4087 2.969950 CCCTCCGTCCCATAACATAAGA 59.030 50.000 0.00 0.00 0.00 2.10
2096 4088 3.006967 CCCTCCGTCCCATAACATAAGAG 59.993 52.174 0.00 0.00 0.00 2.85
2097 4089 3.555168 CCTCCGTCCCATAACATAAGAGC 60.555 52.174 0.00 0.00 0.00 4.09
2098 4090 2.035449 TCCGTCCCATAACATAAGAGCG 59.965 50.000 0.00 0.00 0.00 5.03
2099 4091 2.223971 CCGTCCCATAACATAAGAGCGT 60.224 50.000 0.00 0.00 0.00 5.07
2100 4092 3.454375 CGTCCCATAACATAAGAGCGTT 58.546 45.455 0.00 0.00 0.00 4.84
2101 4093 3.869246 CGTCCCATAACATAAGAGCGTTT 59.131 43.478 0.00 0.00 0.00 3.60
2102 4094 4.331717 CGTCCCATAACATAAGAGCGTTTT 59.668 41.667 0.00 0.00 0.00 2.43
2103 4095 5.163794 CGTCCCATAACATAAGAGCGTTTTT 60.164 40.000 0.00 0.00 0.00 1.94
2145 4137 6.377327 AAAATGCTCTTATGTTATGGGACG 57.623 37.500 0.00 0.00 0.00 4.79
2146 4138 3.469008 TGCTCTTATGTTATGGGACGG 57.531 47.619 0.00 0.00 0.00 4.79
2147 4139 3.035363 TGCTCTTATGTTATGGGACGGA 58.965 45.455 0.00 0.00 0.00 4.69
2148 4140 3.069586 TGCTCTTATGTTATGGGACGGAG 59.930 47.826 0.00 0.00 0.00 4.63
2149 4141 3.555168 GCTCTTATGTTATGGGACGGAGG 60.555 52.174 0.00 0.00 0.00 4.30
2150 4142 2.969950 TCTTATGTTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
2151 4143 2.779429 TATGTTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
2253 4259 9.606631 ACATATAATTTTGTGTGTTTGTTGGTT 57.393 25.926 0.00 0.00 0.00 3.67
2261 4267 3.932089 GTGTGTTTGTTGGTTCTGCATTT 59.068 39.130 0.00 0.00 0.00 2.32
2262 4268 5.105752 GTGTGTTTGTTGGTTCTGCATTTA 58.894 37.500 0.00 0.00 0.00 1.40
2263 4269 5.005299 GTGTGTTTGTTGGTTCTGCATTTAC 59.995 40.000 0.00 0.00 0.00 2.01
2265 4271 5.810074 GTGTTTGTTGGTTCTGCATTTACTT 59.190 36.000 0.00 0.00 0.00 2.24
2266 4272 5.809562 TGTTTGTTGGTTCTGCATTTACTTG 59.190 36.000 0.00 0.00 0.00 3.16
2267 4273 5.843673 TTGTTGGTTCTGCATTTACTTGA 57.156 34.783 0.00 0.00 0.00 3.02
2268 4274 5.437289 TGTTGGTTCTGCATTTACTTGAG 57.563 39.130 0.00 0.00 0.00 3.02
2269 4275 4.887071 TGTTGGTTCTGCATTTACTTGAGT 59.113 37.500 0.00 0.00 0.00 3.41
2270 4276 5.359576 TGTTGGTTCTGCATTTACTTGAGTT 59.640 36.000 0.00 0.00 0.00 3.01
2275 4284 8.892723 TGGTTCTGCATTTACTTGAGTTATATG 58.107 33.333 0.00 0.00 0.00 1.78
2280 4289 6.543465 TGCATTTACTTGAGTTATATGCTGCT 59.457 34.615 17.59 0.00 36.61 4.24
2289 4298 3.139077 GTTATATGCTGCTGTACACCCC 58.861 50.000 0.00 0.00 0.00 4.95
2322 4332 2.139917 TGCCTTGTAACACGCTAGTTG 58.860 47.619 1.41 0.00 33.07 3.16
2332 4345 8.090250 TGTAACACGCTAGTTGAAACATAATT 57.910 30.769 0.96 0.00 33.07 1.40
2333 4346 8.561212 TGTAACACGCTAGTTGAAACATAATTT 58.439 29.630 0.96 0.00 33.07 1.82
2398 4413 9.673454 CCACAATTGTATCATGAATTATCACTG 57.327 33.333 11.53 0.00 38.69 3.66
2416 4431 4.695455 TCACTGTCCTGTGCTATTTTAAGC 59.305 41.667 0.00 0.00 43.08 3.09
2423 4447 9.456147 TGTCCTGTGCTATTTTAAGCTATTTTA 57.544 29.630 0.00 0.00 43.19 1.52
2477 4501 9.569122 ACATCACATATCATTCATTTCTCATCA 57.431 29.630 0.00 0.00 0.00 3.07
2566 4641 6.839124 TTTTATGATTGATTGCTGACCACT 57.161 33.333 0.00 0.00 0.00 4.00
2567 4642 6.839124 TTTATGATTGATTGCTGACCACTT 57.161 33.333 0.00 0.00 0.00 3.16
2568 4643 6.839124 TTATGATTGATTGCTGACCACTTT 57.161 33.333 0.00 0.00 0.00 2.66
2569 4644 5.733620 ATGATTGATTGCTGACCACTTTT 57.266 34.783 0.00 0.00 0.00 2.27
2570 4645 5.534207 TGATTGATTGCTGACCACTTTTT 57.466 34.783 0.00 0.00 0.00 1.94
2571 4646 5.291178 TGATTGATTGCTGACCACTTTTTG 58.709 37.500 0.00 0.00 0.00 2.44
2572 4647 3.096489 TGATTGCTGACCACTTTTTGC 57.904 42.857 0.00 0.00 0.00 3.68
2573 4648 2.694628 TGATTGCTGACCACTTTTTGCT 59.305 40.909 0.00 0.00 0.00 3.91
2574 4649 2.582728 TTGCTGACCACTTTTTGCTG 57.417 45.000 0.00 0.00 0.00 4.41
2575 4650 1.473258 TGCTGACCACTTTTTGCTGT 58.527 45.000 0.00 0.00 0.00 4.40
2576 4651 1.134753 TGCTGACCACTTTTTGCTGTG 59.865 47.619 0.00 0.00 0.00 3.66
2577 4652 1.405105 GCTGACCACTTTTTGCTGTGA 59.595 47.619 0.00 0.00 36.38 3.58
2578 4653 2.035066 GCTGACCACTTTTTGCTGTGAT 59.965 45.455 0.00 0.00 36.38 3.06
2579 4654 3.491447 GCTGACCACTTTTTGCTGTGATT 60.491 43.478 0.00 0.00 36.38 2.57
2580 4655 4.044336 TGACCACTTTTTGCTGTGATTG 57.956 40.909 0.00 0.00 36.38 2.67
2581 4656 2.796593 GACCACTTTTTGCTGTGATTGC 59.203 45.455 0.00 0.00 36.38 3.56
2582 4657 2.168106 ACCACTTTTTGCTGTGATTGCA 59.832 40.909 0.00 0.00 38.80 4.08
2583 4658 2.798283 CCACTTTTTGCTGTGATTGCAG 59.202 45.455 0.00 0.00 41.71 4.41
2593 4668 3.754955 CTGTGATTGCAGCACTATTGTG 58.245 45.455 18.66 2.65 46.37 3.33
2594 4669 3.148412 TGTGATTGCAGCACTATTGTGT 58.852 40.909 18.66 0.00 45.44 3.72
2595 4670 3.569277 TGTGATTGCAGCACTATTGTGTT 59.431 39.130 18.66 0.00 45.44 3.32
2596 4671 4.161333 GTGATTGCAGCACTATTGTGTTC 58.839 43.478 12.84 0.03 45.44 3.18
2597 4672 3.819902 TGATTGCAGCACTATTGTGTTCA 59.180 39.130 9.05 2.43 45.44 3.18
2598 4673 3.902261 TTGCAGCACTATTGTGTTCAG 57.098 42.857 9.05 0.00 45.44 3.02
2599 4674 2.849942 TGCAGCACTATTGTGTTCAGT 58.150 42.857 9.05 0.00 45.44 3.41
2600 4675 4.001618 TGCAGCACTATTGTGTTCAGTA 57.998 40.909 9.05 0.00 45.44 2.74
2601 4676 4.578871 TGCAGCACTATTGTGTTCAGTAT 58.421 39.130 9.05 0.00 45.44 2.12
2602 4677 4.392754 TGCAGCACTATTGTGTTCAGTATG 59.607 41.667 9.05 0.00 45.44 2.39
2603 4678 4.201851 GCAGCACTATTGTGTTCAGTATGG 60.202 45.833 9.05 0.00 45.44 2.74
2604 4679 3.941483 AGCACTATTGTGTTCAGTATGGC 59.059 43.478 9.05 0.00 45.44 4.40
2605 4680 3.065371 GCACTATTGTGTTCAGTATGGCC 59.935 47.826 9.05 0.00 45.44 5.36
2606 4681 3.627577 CACTATTGTGTTCAGTATGGCCC 59.372 47.826 0.00 0.00 39.24 5.80
2607 4682 3.523564 ACTATTGTGTTCAGTATGGCCCT 59.476 43.478 0.00 0.00 36.16 5.19
2608 4683 2.969821 TTGTGTTCAGTATGGCCCTT 57.030 45.000 0.00 0.00 36.16 3.95
2609 4684 2.969821 TGTGTTCAGTATGGCCCTTT 57.030 45.000 0.00 0.00 36.16 3.11
2610 4685 3.237268 TGTGTTCAGTATGGCCCTTTT 57.763 42.857 0.00 0.00 36.16 2.27
2611 4686 3.571590 TGTGTTCAGTATGGCCCTTTTT 58.428 40.909 0.00 0.00 36.16 1.94
2796 4871 5.504337 CGACTAAACCTCCGAAGTCTATCTG 60.504 48.000 0.00 0.00 36.94 2.90
2908 4985 8.797438 TGGTAATGTGATATCTAGCTTGAGTAG 58.203 37.037 3.82 0.00 0.00 2.57
3027 5105 0.955428 TCTGATGTTGCTTGCCGTCC 60.955 55.000 0.00 0.00 0.00 4.79
3028 5106 0.957395 CTGATGTTGCTTGCCGTCCT 60.957 55.000 0.00 0.00 0.00 3.85
3041 5119 2.769663 TGCCGTCCTTGGTATATGACTT 59.230 45.455 0.00 0.00 0.00 3.01
3061 5139 8.939201 TGACTTTTGAAATGTTTATTGCTTGA 57.061 26.923 0.00 0.00 0.00 3.02
3071 5149 6.528014 TGTTTATTGCTTGAATTTGCTGTG 57.472 33.333 0.00 0.00 0.00 3.66
3088 5172 8.709386 TTTGCTGTGTGTTACATTATTTGTTT 57.291 26.923 0.00 0.00 39.87 2.83
3089 5173 7.691430 TGCTGTGTGTTACATTATTTGTTTG 57.309 32.000 0.00 0.00 39.87 2.93
3090 5174 7.261325 TGCTGTGTGTTACATTATTTGTTTGT 58.739 30.769 0.00 0.00 39.87 2.83
3091 5175 7.761704 TGCTGTGTGTTACATTATTTGTTTGTT 59.238 29.630 0.00 0.00 39.87 2.83
3092 5176 8.055402 GCTGTGTGTTACATTATTTGTTTGTTG 58.945 33.333 0.00 0.00 39.87 3.33
3094 5178 7.545615 TGTGTGTTACATTATTTGTTTGTTGCA 59.454 29.630 0.00 0.00 39.87 4.08
3095 5179 7.843686 GTGTGTTACATTATTTGTTTGTTGCAC 59.156 33.333 0.00 0.00 39.87 4.57
3098 5182 7.223582 TGTTACATTATTTGTTTGTTGCACCTG 59.776 33.333 0.00 0.00 39.87 4.00
3099 5183 4.511082 ACATTATTTGTTTGTTGCACCTGC 59.489 37.500 0.00 0.00 33.74 4.85
3100 5184 5.913983 ACATTATTTGTTTGTTGCACCTGCA 60.914 36.000 0.00 0.00 42.37 4.41
3128 5234 3.731728 CCCCAGGCTGCCTTGCTA 61.732 66.667 20.79 0.00 0.00 3.49
3130 5236 2.673523 CCAGGCTGCCTTGCTACT 59.326 61.111 20.79 0.00 0.00 2.57
3146 5252 2.417719 CTACTGCTTGCCGTCTTCTTT 58.582 47.619 0.00 0.00 0.00 2.52
3157 5266 5.412640 TGCCGTCTTCTTTACGAATAATCA 58.587 37.500 0.00 0.00 42.90 2.57
3162 5271 8.269424 CCGTCTTCTTTACGAATAATCAATCTG 58.731 37.037 0.00 0.00 42.90 2.90
3173 5294 6.854892 CGAATAATCAATCTGATGCCTTTGTC 59.145 38.462 0.00 0.00 37.15 3.18
3177 5298 1.645034 ATCTGATGCCTTTGTCGTCG 58.355 50.000 0.00 0.00 0.00 5.12
3188 5309 0.665068 TTGTCGTCGACCATCCAACG 60.665 55.000 22.05 0.00 36.50 4.10
3202 5323 1.009829 CCAACGGTATGCTCTTCTGC 58.990 55.000 0.00 0.00 0.00 4.26
3205 5326 1.320344 ACGGTATGCTCTTCTGCGGA 61.320 55.000 0.00 0.00 35.36 5.54
3208 5329 1.281899 GTATGCTCTTCTGCGGACAC 58.718 55.000 0.00 0.00 35.36 3.67
3214 5335 2.223923 GCTCTTCTGCGGACACAGATAT 60.224 50.000 0.00 0.00 45.75 1.63
3215 5336 3.739519 GCTCTTCTGCGGACACAGATATT 60.740 47.826 0.00 0.00 45.75 1.28
3223 5344 3.067106 CGGACACAGATATTGTATGCCC 58.933 50.000 0.00 0.00 38.16 5.36
3224 5345 3.494223 CGGACACAGATATTGTATGCCCA 60.494 47.826 0.00 0.00 38.16 5.36
3225 5346 4.460263 GGACACAGATATTGTATGCCCAA 58.540 43.478 0.00 0.00 38.16 4.12
3227 5348 5.536161 GGACACAGATATTGTATGCCCAAAT 59.464 40.000 0.00 0.00 38.16 2.32
3231 5352 6.698329 CACAGATATTGTATGCCCAAATGTTG 59.302 38.462 0.00 0.00 38.16 3.33
3234 5355 4.888326 ATTGTATGCCCAAATGTTGTGT 57.112 36.364 0.00 0.00 0.00 3.72
3235 5356 3.657015 TGTATGCCCAAATGTTGTGTG 57.343 42.857 0.00 0.00 0.00 3.82
3236 5357 2.961741 TGTATGCCCAAATGTTGTGTGT 59.038 40.909 0.00 0.00 0.00 3.72
3238 5359 0.179089 TGCCCAAATGTTGTGTGTGC 60.179 50.000 0.00 0.00 0.00 4.57
3261 5382 7.376601 GTGCATTTGAATGAAATTGAACAAACC 59.623 33.333 7.86 0.00 36.07 3.27
3266 5387 5.925397 TGAATGAAATTGAACAAACCGGATG 59.075 36.000 9.46 9.74 36.07 3.51
3272 5393 7.497249 TGAAATTGAACAAACCGGATGAATTTT 59.503 29.630 9.46 0.00 0.00 1.82
3278 5399 5.788450 ACAAACCGGATGAATTTTATGCAA 58.212 33.333 9.46 0.00 0.00 4.08
3286 5407 6.625740 CGGATGAATTTTATGCAAACTGGACT 60.626 38.462 0.00 0.00 0.00 3.85
3287 5408 6.532657 GGATGAATTTTATGCAAACTGGACTG 59.467 38.462 0.00 0.00 0.00 3.51
3302 5423 5.263599 ACTGGACTGAATTTGCAATATCCA 58.736 37.500 0.00 6.80 33.97 3.41
3316 5437 9.500785 TTTGCAATATCCATACTCATTATTCGA 57.499 29.630 0.00 0.00 0.00 3.71
3347 5468 4.150897 TGGATACAGGATGGTAGTTTGC 57.849 45.455 0.00 0.00 46.17 3.68
3348 5469 3.118038 TGGATACAGGATGGTAGTTTGCC 60.118 47.826 0.00 0.00 46.17 4.52
3349 5470 3.118038 GGATACAGGATGGTAGTTTGCCA 60.118 47.826 0.00 0.00 43.62 4.92
3350 5471 6.879316 TGGATACAGGATGGTAGTTTGCCAT 61.879 44.000 0.00 0.00 45.96 4.40
3351 5472 3.456380 ACAGGATGGTAGTTTGCCATT 57.544 42.857 0.22 0.00 45.87 3.16
3352 5473 3.356290 ACAGGATGGTAGTTTGCCATTC 58.644 45.455 0.22 0.00 45.87 2.67
3353 5474 3.245229 ACAGGATGGTAGTTTGCCATTCA 60.245 43.478 7.15 0.00 45.87 2.57
3354 5475 3.763360 CAGGATGGTAGTTTGCCATTCAA 59.237 43.478 7.15 0.00 45.87 2.69
3355 5476 3.763897 AGGATGGTAGTTTGCCATTCAAC 59.236 43.478 7.15 0.00 45.87 3.18
3356 5477 3.119137 GGATGGTAGTTTGCCATTCAACC 60.119 47.826 0.22 0.00 45.87 3.77
3357 5478 1.883275 TGGTAGTTTGCCATTCAACCG 59.117 47.619 0.00 0.00 33.73 4.44
3358 5479 1.883926 GGTAGTTTGCCATTCAACCGT 59.116 47.619 0.00 0.00 33.73 4.83
3359 5480 3.075884 GGTAGTTTGCCATTCAACCGTA 58.924 45.455 0.00 0.00 33.73 4.02
3360 5481 3.692593 GGTAGTTTGCCATTCAACCGTAT 59.307 43.478 0.00 0.00 33.73 3.06
3361 5482 4.877251 GGTAGTTTGCCATTCAACCGTATA 59.123 41.667 0.00 0.00 33.73 1.47
3362 5483 5.354792 GGTAGTTTGCCATTCAACCGTATAA 59.645 40.000 0.00 0.00 33.73 0.98
3363 5484 5.305139 AGTTTGCCATTCAACCGTATAAC 57.695 39.130 0.00 0.00 33.73 1.89
3364 5485 5.007682 AGTTTGCCATTCAACCGTATAACT 58.992 37.500 0.00 0.00 33.73 2.24
3365 5486 6.174760 AGTTTGCCATTCAACCGTATAACTA 58.825 36.000 0.00 0.00 33.73 2.24
3366 5487 6.826741 AGTTTGCCATTCAACCGTATAACTAT 59.173 34.615 0.00 0.00 33.73 2.12
3367 5488 6.854496 TTGCCATTCAACCGTATAACTATC 57.146 37.500 0.00 0.00 0.00 2.08
3368 5489 4.986034 TGCCATTCAACCGTATAACTATCG 59.014 41.667 0.00 0.00 0.00 2.92
3369 5490 4.143179 GCCATTCAACCGTATAACTATCGC 60.143 45.833 0.00 0.00 0.00 4.58
3370 5491 5.227908 CCATTCAACCGTATAACTATCGCT 58.772 41.667 0.00 0.00 0.00 4.93
3371 5492 6.384224 CCATTCAACCGTATAACTATCGCTA 58.616 40.000 0.00 0.00 0.00 4.26
3372 5493 6.527023 CCATTCAACCGTATAACTATCGCTAG 59.473 42.308 0.00 0.00 0.00 3.42
3373 5494 5.039480 TCAACCGTATAACTATCGCTAGC 57.961 43.478 4.06 4.06 0.00 3.42
3374 5495 4.516321 TCAACCGTATAACTATCGCTAGCA 59.484 41.667 16.45 2.17 0.00 3.49
3375 5496 5.182570 TCAACCGTATAACTATCGCTAGCAT 59.817 40.000 16.45 9.93 0.00 3.79
3376 5497 5.640189 ACCGTATAACTATCGCTAGCATT 57.360 39.130 16.45 3.41 0.00 3.56
3377 5498 6.022163 ACCGTATAACTATCGCTAGCATTT 57.978 37.500 16.45 0.65 0.00 2.32
3378 5499 6.453092 ACCGTATAACTATCGCTAGCATTTT 58.547 36.000 16.45 2.60 0.00 1.82
3379 5500 6.365247 ACCGTATAACTATCGCTAGCATTTTG 59.635 38.462 16.45 2.97 0.00 2.44
3380 5501 6.365247 CCGTATAACTATCGCTAGCATTTTGT 59.635 38.462 16.45 3.62 0.00 2.83
3381 5502 7.539710 CCGTATAACTATCGCTAGCATTTTGTA 59.460 37.037 16.45 0.06 0.00 2.41
3382 5503 9.073368 CGTATAACTATCGCTAGCATTTTGTAT 57.927 33.333 16.45 7.69 0.00 2.29
3385 5506 7.786178 AACTATCGCTAGCATTTTGTATGAA 57.214 32.000 16.45 0.00 0.00 2.57
3386 5507 7.786178 ACTATCGCTAGCATTTTGTATGAAA 57.214 32.000 16.45 0.00 0.00 2.69
3387 5508 8.208718 ACTATCGCTAGCATTTTGTATGAAAA 57.791 30.769 16.45 0.00 0.00 2.29
3388 5509 8.840321 ACTATCGCTAGCATTTTGTATGAAAAT 58.160 29.630 16.45 0.00 0.00 1.82
3389 5510 9.669353 CTATCGCTAGCATTTTGTATGAAAATT 57.331 29.630 16.45 0.00 0.00 1.82
3390 5511 7.739022 TCGCTAGCATTTTGTATGAAAATTG 57.261 32.000 16.45 0.00 0.00 2.32
3391 5512 7.534282 TCGCTAGCATTTTGTATGAAAATTGA 58.466 30.769 16.45 0.00 0.00 2.57
3392 5513 7.484641 TCGCTAGCATTTTGTATGAAAATTGAC 59.515 33.333 16.45 0.00 0.00 3.18
3393 5514 7.253750 CGCTAGCATTTTGTATGAAAATTGACC 60.254 37.037 16.45 0.00 0.00 4.02
3394 5515 7.545265 GCTAGCATTTTGTATGAAAATTGACCA 59.455 33.333 10.63 0.00 0.00 4.02
3395 5516 7.656707 AGCATTTTGTATGAAAATTGACCAC 57.343 32.000 0.00 0.00 0.00 4.16
3396 5517 7.215789 AGCATTTTGTATGAAAATTGACCACA 58.784 30.769 0.00 0.00 0.00 4.17
3397 5518 7.171337 AGCATTTTGTATGAAAATTGACCACAC 59.829 33.333 0.00 0.00 0.00 3.82
3398 5519 7.500691 CATTTTGTATGAAAATTGACCACACG 58.499 34.615 0.00 0.00 0.00 4.49
3399 5520 6.378710 TTTGTATGAAAATTGACCACACGA 57.621 33.333 0.00 0.00 0.00 4.35
3400 5521 5.605564 TGTATGAAAATTGACCACACGAG 57.394 39.130 0.00 0.00 0.00 4.18
3401 5522 5.301555 TGTATGAAAATTGACCACACGAGA 58.698 37.500 0.00 0.00 0.00 4.04
3402 5523 5.937540 TGTATGAAAATTGACCACACGAGAT 59.062 36.000 0.00 0.00 0.00 2.75
3403 5524 4.747540 TGAAAATTGACCACACGAGATG 57.252 40.909 0.00 0.00 0.00 2.90
3404 5525 4.384940 TGAAAATTGACCACACGAGATGA 58.615 39.130 0.00 0.00 0.00 2.92
3405 5526 4.819088 TGAAAATTGACCACACGAGATGAA 59.181 37.500 0.00 0.00 0.00 2.57
3406 5527 5.473162 TGAAAATTGACCACACGAGATGAAT 59.527 36.000 0.00 0.00 0.00 2.57
3407 5528 5.964958 AAATTGACCACACGAGATGAATT 57.035 34.783 0.00 0.00 0.00 2.17
3408 5529 5.964958 AATTGACCACACGAGATGAATTT 57.035 34.783 0.00 0.00 0.00 1.82
3409 5530 5.551760 ATTGACCACACGAGATGAATTTC 57.448 39.130 0.00 0.00 0.00 2.17
3410 5531 4.001618 TGACCACACGAGATGAATTTCA 57.998 40.909 0.75 0.75 0.00 2.69
3411 5532 4.578871 TGACCACACGAGATGAATTTCAT 58.421 39.130 11.64 11.64 40.34 2.57
3412 5533 4.392754 TGACCACACGAGATGAATTTCATG 59.607 41.667 16.41 6.06 37.20 3.07
3413 5534 3.127548 ACCACACGAGATGAATTTCATGC 59.872 43.478 16.41 7.52 37.20 4.06
3414 5535 3.127376 CCACACGAGATGAATTTCATGCA 59.873 43.478 16.41 0.00 37.20 3.96
3415 5536 4.379708 CCACACGAGATGAATTTCATGCAA 60.380 41.667 16.41 0.00 37.20 4.08
3416 5537 4.791676 CACACGAGATGAATTTCATGCAAG 59.208 41.667 16.41 7.65 37.20 4.01
3417 5538 4.142534 ACACGAGATGAATTTCATGCAAGG 60.143 41.667 16.41 6.12 37.20 3.61
3418 5539 3.181493 ACGAGATGAATTTCATGCAAGGC 60.181 43.478 16.41 1.48 37.20 4.35
3419 5540 3.369385 GAGATGAATTTCATGCAAGGCG 58.631 45.455 16.41 0.00 37.20 5.52
3420 5541 3.018856 AGATGAATTTCATGCAAGGCGA 58.981 40.909 16.41 0.00 37.20 5.54
3421 5542 3.444742 AGATGAATTTCATGCAAGGCGAA 59.555 39.130 16.41 0.00 37.20 4.70
3422 5543 3.872511 TGAATTTCATGCAAGGCGAAT 57.127 38.095 0.00 0.00 0.00 3.34
3423 5544 3.513662 TGAATTTCATGCAAGGCGAATG 58.486 40.909 0.00 0.00 0.00 2.67
3424 5545 3.193056 TGAATTTCATGCAAGGCGAATGA 59.807 39.130 0.00 0.00 0.00 2.57
3425 5546 3.872511 ATTTCATGCAAGGCGAATGAA 57.127 38.095 0.00 0.00 0.00 2.57
3426 5547 3.872511 TTTCATGCAAGGCGAATGAAT 57.127 38.095 0.00 0.00 32.22 2.57
3427 5548 3.872511 TTCATGCAAGGCGAATGAATT 57.127 38.095 0.00 0.00 0.00 2.17
3428 5549 3.872511 TCATGCAAGGCGAATGAATTT 57.127 38.095 0.00 0.00 0.00 1.82
3429 5550 4.979943 TCATGCAAGGCGAATGAATTTA 57.020 36.364 0.00 0.00 0.00 1.40
3430 5551 5.321959 TCATGCAAGGCGAATGAATTTAA 57.678 34.783 0.00 0.00 0.00 1.52
3431 5552 5.904941 TCATGCAAGGCGAATGAATTTAAT 58.095 33.333 0.00 0.00 0.00 1.40
3432 5553 5.749588 TCATGCAAGGCGAATGAATTTAATG 59.250 36.000 0.00 0.00 0.00 1.90
3433 5554 3.864583 TGCAAGGCGAATGAATTTAATGC 59.135 39.130 0.00 0.00 0.00 3.56
3434 5555 3.864583 GCAAGGCGAATGAATTTAATGCA 59.135 39.130 0.00 0.00 0.00 3.96
3435 5556 4.329528 GCAAGGCGAATGAATTTAATGCAA 59.670 37.500 0.00 0.00 0.00 4.08
3436 5557 5.163874 GCAAGGCGAATGAATTTAATGCAAA 60.164 36.000 0.00 0.00 0.00 3.68
3437 5558 6.457257 GCAAGGCGAATGAATTTAATGCAAAT 60.457 34.615 0.00 0.00 38.54 2.32
3439 5560 7.007313 AGGCGAATGAATTTAATGCAAATTG 57.993 32.000 0.00 0.00 44.98 2.32
3440 5561 6.037391 AGGCGAATGAATTTAATGCAAATTGG 59.963 34.615 0.00 0.00 44.98 3.16
3441 5562 6.036953 GGCGAATGAATTTAATGCAAATTGGA 59.963 34.615 0.00 0.00 44.98 3.53
3442 5563 6.901357 GCGAATGAATTTAATGCAAATTGGAC 59.099 34.615 0.00 0.00 44.98 4.02
3443 5564 7.401080 CGAATGAATTTAATGCAAATTGGACC 58.599 34.615 0.00 0.00 44.98 4.46
3444 5565 7.278424 CGAATGAATTTAATGCAAATTGGACCT 59.722 33.333 0.00 0.00 44.98 3.85
3445 5566 9.598517 GAATGAATTTAATGCAAATTGGACCTA 57.401 29.630 0.00 0.00 44.98 3.08
3446 5567 9.956640 AATGAATTTAATGCAAATTGGACCTAA 57.043 25.926 0.00 0.00 44.98 2.69
3448 5569 9.956640 TGAATTTAATGCAAATTGGACCTAATT 57.043 25.926 0.00 0.00 44.98 1.40
3450 5571 9.956640 AATTTAATGCAAATTGGACCTAATTCA 57.043 25.926 0.00 0.00 43.65 2.57
3452 5573 8.945481 TTAATGCAAATTGGACCTAATTCATG 57.055 30.769 0.00 0.00 30.33 3.07
3453 5574 5.999205 TGCAAATTGGACCTAATTCATGT 57.001 34.783 0.00 0.00 30.33 3.21
3454 5575 6.357579 TGCAAATTGGACCTAATTCATGTT 57.642 33.333 0.00 0.00 30.33 2.71
3455 5576 7.473735 TGCAAATTGGACCTAATTCATGTTA 57.526 32.000 0.00 0.00 30.33 2.41
3456 5577 7.319646 TGCAAATTGGACCTAATTCATGTTAC 58.680 34.615 0.00 0.00 30.33 2.50
3457 5578 7.039434 TGCAAATTGGACCTAATTCATGTTACA 60.039 33.333 0.00 0.00 30.33 2.41
3458 5579 7.981225 GCAAATTGGACCTAATTCATGTTACAT 59.019 33.333 0.00 0.00 30.33 2.29
3487 5608 9.995003 TTACATTAAAATTGGACAAATTCAGCT 57.005 25.926 0.00 0.00 37.51 4.24
3488 5609 8.907222 ACATTAAAATTGGACAAATTCAGCTT 57.093 26.923 0.00 0.00 37.51 3.74
3489 5610 9.995003 ACATTAAAATTGGACAAATTCAGCTTA 57.005 25.926 0.00 0.00 37.51 3.09
3537 5658 3.245518 ACGCTAGTGACAATGTATGCA 57.754 42.857 10.99 0.00 0.00 3.96
3538 5659 3.797039 ACGCTAGTGACAATGTATGCAT 58.203 40.909 10.99 3.79 36.80 3.96
3539 5660 3.557185 ACGCTAGTGACAATGTATGCATG 59.443 43.478 10.16 0.00 35.15 4.06
3540 5661 3.605461 CGCTAGTGACAATGTATGCATGC 60.605 47.826 11.82 11.82 35.15 4.06
3541 5662 3.562973 GCTAGTGACAATGTATGCATGCT 59.437 43.478 20.33 7.07 35.15 3.79
3542 5663 4.319333 GCTAGTGACAATGTATGCATGCTC 60.319 45.833 20.33 9.94 35.15 4.26
3543 5664 2.610833 AGTGACAATGTATGCATGCTCG 59.389 45.455 20.33 6.71 35.15 5.03
3544 5665 1.331447 TGACAATGTATGCATGCTCGC 59.669 47.619 20.33 8.98 35.15 5.03
3545 5666 1.600957 GACAATGTATGCATGCTCGCT 59.399 47.619 20.33 3.63 35.15 4.93
3546 5667 1.600957 ACAATGTATGCATGCTCGCTC 59.399 47.619 20.33 5.70 35.15 5.03
3547 5668 1.871676 CAATGTATGCATGCTCGCTCT 59.128 47.619 20.33 0.00 35.15 4.09
3548 5669 1.509703 ATGTATGCATGCTCGCTCTG 58.490 50.000 20.33 0.00 33.37 3.35
3549 5670 1.156034 TGTATGCATGCTCGCTCTGC 61.156 55.000 20.33 9.17 36.45 4.26
3550 5671 0.879400 GTATGCATGCTCGCTCTGCT 60.879 55.000 20.33 6.48 36.84 4.24
3551 5672 0.675633 TATGCATGCTCGCTCTGCTA 59.324 50.000 20.33 0.00 36.84 3.49
3552 5673 0.600518 ATGCATGCTCGCTCTGCTAG 60.601 55.000 20.33 0.00 36.84 3.42
3553 5674 1.227205 GCATGCTCGCTCTGCTAGT 60.227 57.895 11.37 0.00 33.15 2.57
3554 5675 0.809241 GCATGCTCGCTCTGCTAGTT 60.809 55.000 11.37 0.00 33.15 2.24
3555 5676 0.928922 CATGCTCGCTCTGCTAGTTG 59.071 55.000 0.00 0.00 0.00 3.16
3556 5677 0.809241 ATGCTCGCTCTGCTAGTTGC 60.809 55.000 0.00 0.00 43.25 4.17
3557 5678 2.170434 GCTCGCTCTGCTAGTTGCC 61.170 63.158 0.00 0.00 42.00 4.52
3558 5679 1.515020 CTCGCTCTGCTAGTTGCCT 59.485 57.895 0.00 0.00 42.00 4.75
3559 5680 0.741326 CTCGCTCTGCTAGTTGCCTA 59.259 55.000 0.00 0.00 42.00 3.93
3560 5681 0.456221 TCGCTCTGCTAGTTGCCTAC 59.544 55.000 0.00 0.00 42.00 3.18
3561 5682 0.457851 CGCTCTGCTAGTTGCCTACT 59.542 55.000 0.00 0.00 42.00 2.57
3562 5683 1.800655 CGCTCTGCTAGTTGCCTACTG 60.801 57.143 0.00 0.00 42.00 2.74
3563 5684 1.933247 CTCTGCTAGTTGCCTACTGC 58.067 55.000 0.00 2.43 42.00 4.40
3564 5685 1.480137 CTCTGCTAGTTGCCTACTGCT 59.520 52.381 0.00 0.00 42.00 4.24
3565 5686 1.478510 TCTGCTAGTTGCCTACTGCTC 59.521 52.381 0.00 0.00 42.00 4.26
3566 5687 0.173481 TGCTAGTTGCCTACTGCTCG 59.827 55.000 0.00 0.00 42.00 5.03
3567 5688 0.173708 GCTAGTTGCCTACTGCTCGT 59.826 55.000 0.00 0.00 42.00 4.18
3568 5689 1.914634 CTAGTTGCCTACTGCTCGTG 58.085 55.000 0.00 0.00 42.00 4.35
3569 5690 0.530744 TAGTTGCCTACTGCTCGTGG 59.469 55.000 0.00 0.00 42.00 4.94
3570 5691 2.047274 TTGCCTACTGCTCGTGGC 60.047 61.111 0.00 0.00 45.10 5.01
3591 5712 2.653115 GCCACTGGCTTCCTTTGC 59.347 61.111 13.28 0.00 46.69 3.68
3592 5713 1.905354 GCCACTGGCTTCCTTTGCT 60.905 57.895 13.28 0.00 46.69 3.91
3593 5714 1.962144 CCACTGGCTTCCTTTGCTG 59.038 57.895 0.00 0.00 0.00 4.41
3594 5715 1.288127 CACTGGCTTCCTTTGCTGC 59.712 57.895 0.00 0.00 0.00 5.25
3595 5716 1.905354 ACTGGCTTCCTTTGCTGCC 60.905 57.895 0.00 0.00 45.10 4.85
3597 5718 2.653115 GGCTTCCTTTGCTGCCAC 59.347 61.111 0.00 0.00 44.34 5.01
3598 5719 1.905354 GGCTTCCTTTGCTGCCACT 60.905 57.895 0.00 0.00 44.34 4.00
3599 5720 1.466851 GGCTTCCTTTGCTGCCACTT 61.467 55.000 0.00 0.00 44.34 3.16
3600 5721 0.319297 GCTTCCTTTGCTGCCACTTG 60.319 55.000 0.00 0.00 0.00 3.16
3601 5722 0.316204 CTTCCTTTGCTGCCACTTGG 59.684 55.000 0.00 0.00 38.53 3.61
3621 5742 4.452733 GCGAACCCCTCCTCGGTG 62.453 72.222 0.00 0.00 35.60 4.94
3622 5743 2.995574 CGAACCCCTCCTCGGTGT 60.996 66.667 0.00 0.00 32.55 4.16
3623 5744 2.663196 GAACCCCTCCTCGGTGTG 59.337 66.667 0.00 0.00 32.55 3.82
3624 5745 3.607370 GAACCCCTCCTCGGTGTGC 62.607 68.421 0.00 0.00 32.55 4.57
3644 5765 4.372999 GCCCCTCTTGCCCTTGCT 62.373 66.667 0.00 0.00 38.71 3.91
3645 5766 2.362120 CCCCTCTTGCCCTTGCTG 60.362 66.667 0.00 0.00 38.71 4.41
3646 5767 2.759114 CCCTCTTGCCCTTGCTGA 59.241 61.111 0.00 0.00 38.71 4.26
3647 5768 1.676967 CCCTCTTGCCCTTGCTGAC 60.677 63.158 0.00 0.00 38.71 3.51
3648 5769 1.073722 CCTCTTGCCCTTGCTGACA 59.926 57.895 0.00 0.00 38.71 3.58
3649 5770 0.538057 CCTCTTGCCCTTGCTGACAA 60.538 55.000 0.00 0.00 38.71 3.18
3650 5771 1.542492 CTCTTGCCCTTGCTGACAAT 58.458 50.000 0.00 0.00 38.71 2.71
3651 5772 1.201647 CTCTTGCCCTTGCTGACAATG 59.798 52.381 0.00 0.00 38.71 2.82
3652 5773 1.202915 TCTTGCCCTTGCTGACAATGA 60.203 47.619 0.00 0.00 38.71 2.57
3653 5774 1.201647 CTTGCCCTTGCTGACAATGAG 59.798 52.381 0.00 0.00 38.71 2.90
3654 5775 0.609957 TGCCCTTGCTGACAATGAGG 60.610 55.000 0.00 0.00 38.71 3.86
3655 5776 1.318158 GCCCTTGCTGACAATGAGGG 61.318 60.000 10.83 10.83 40.28 4.30
3656 5777 1.318158 CCCTTGCTGACAATGAGGGC 61.318 60.000 4.30 0.00 33.42 5.19
3657 5778 1.318158 CCTTGCTGACAATGAGGGCC 61.318 60.000 0.00 0.00 34.61 5.80
3658 5779 1.651240 CTTGCTGACAATGAGGGCCG 61.651 60.000 0.00 0.00 34.61 6.13
3659 5780 3.512516 GCTGACAATGAGGGCCGC 61.513 66.667 0.00 0.00 0.00 6.53
3660 5781 3.197790 CTGACAATGAGGGCCGCG 61.198 66.667 0.00 0.00 0.00 6.46
3661 5782 4.776322 TGACAATGAGGGCCGCGG 62.776 66.667 24.05 24.05 0.00 6.46
3679 5800 4.662961 CACGCACTGACTCGGCCA 62.663 66.667 2.24 0.00 0.00 5.36
3680 5801 4.664677 ACGCACTGACTCGGCCAC 62.665 66.667 2.24 0.00 0.00 5.01
3681 5802 4.662961 CGCACTGACTCGGCCACA 62.663 66.667 2.24 0.00 0.00 4.17
3682 5803 3.044305 GCACTGACTCGGCCACAC 61.044 66.667 2.24 0.00 0.00 3.82
3683 5804 2.357517 CACTGACTCGGCCACACC 60.358 66.667 2.24 0.00 0.00 4.16
3684 5805 2.842462 ACTGACTCGGCCACACCA 60.842 61.111 2.24 0.00 39.03 4.17
3685 5806 2.425592 CTGACTCGGCCACACCAA 59.574 61.111 2.24 0.00 39.03 3.67
3686 5807 1.003355 CTGACTCGGCCACACCAAT 60.003 57.895 2.24 0.00 39.03 3.16
3687 5808 1.003839 TGACTCGGCCACACCAATC 60.004 57.895 2.24 0.00 39.03 2.67
3688 5809 1.296715 GACTCGGCCACACCAATCT 59.703 57.895 2.24 0.00 39.03 2.40
3689 5810 0.321653 GACTCGGCCACACCAATCTT 60.322 55.000 2.24 0.00 39.03 2.40
3690 5811 0.110486 ACTCGGCCACACCAATCTTT 59.890 50.000 2.24 0.00 39.03 2.52
3691 5812 0.523072 CTCGGCCACACCAATCTTTG 59.477 55.000 2.24 0.00 39.03 2.77
3692 5813 1.080569 CGGCCACACCAATCTTTGC 60.081 57.895 2.24 0.00 39.03 3.68
3693 5814 1.804396 CGGCCACACCAATCTTTGCA 61.804 55.000 2.24 0.00 39.03 4.08
3694 5815 0.392336 GGCCACACCAATCTTTGCAA 59.608 50.000 0.00 0.00 38.86 4.08
3695 5816 1.606224 GGCCACACCAATCTTTGCAAG 60.606 52.381 0.00 0.00 38.86 4.01
3696 5817 1.069049 GCCACACCAATCTTTGCAAGT 59.931 47.619 0.00 0.00 0.00 3.16
3697 5818 2.483538 GCCACACCAATCTTTGCAAGTT 60.484 45.455 0.00 0.00 0.00 2.66
3698 5819 3.125316 CCACACCAATCTTTGCAAGTTG 58.875 45.455 0.00 6.76 0.00 3.16
3699 5820 2.540931 CACACCAATCTTTGCAAGTTGC 59.459 45.455 21.17 21.17 45.29 4.17
3700 5821 2.431782 ACACCAATCTTTGCAAGTTGCT 59.568 40.909 27.17 5.03 45.31 3.91
3701 5822 3.054878 CACCAATCTTTGCAAGTTGCTC 58.945 45.455 27.17 1.38 45.31 4.26
3702 5823 2.287788 ACCAATCTTTGCAAGTTGCTCG 60.288 45.455 27.17 15.47 45.31 5.03
3703 5824 2.287788 CCAATCTTTGCAAGTTGCTCGT 60.288 45.455 27.17 7.55 45.31 4.18
3704 5825 3.374745 CAATCTTTGCAAGTTGCTCGTT 58.625 40.909 27.17 12.61 45.31 3.85
3705 5826 2.473530 TCTTTGCAAGTTGCTCGTTG 57.526 45.000 27.17 13.30 45.31 4.10
3706 5827 2.013400 TCTTTGCAAGTTGCTCGTTGA 58.987 42.857 27.17 15.12 45.31 3.18
3707 5828 2.032054 TCTTTGCAAGTTGCTCGTTGAG 59.968 45.455 27.17 15.13 45.31 3.02
3708 5829 0.662619 TTGCAAGTTGCTCGTTGAGG 59.337 50.000 27.17 0.00 45.31 3.86
3709 5830 0.463654 TGCAAGTTGCTCGTTGAGGT 60.464 50.000 27.17 0.00 45.31 3.85
3710 5831 0.040958 GCAAGTTGCTCGTTGAGGTG 60.041 55.000 20.71 0.00 40.96 4.00
3711 5832 0.588252 CAAGTTGCTCGTTGAGGTGG 59.412 55.000 0.00 0.00 0.00 4.61
3712 5833 1.166531 AAGTTGCTCGTTGAGGTGGC 61.167 55.000 0.00 0.00 0.00 5.01
3713 5834 2.281484 TTGCTCGTTGAGGTGGCC 60.281 61.111 0.00 0.00 0.00 5.36
3714 5835 3.842925 TTGCTCGTTGAGGTGGCCC 62.843 63.158 0.00 0.00 0.00 5.80
3716 5837 4.760047 CTCGTTGAGGTGGCCCCG 62.760 72.222 0.00 0.00 38.74 5.73
3734 5855 3.490759 CGCCGCGCAAATGTCTCT 61.491 61.111 8.75 0.00 0.00 3.10
3735 5856 2.099062 GCCGCGCAAATGTCTCTG 59.901 61.111 8.75 0.00 0.00 3.35
3736 5857 2.099062 CCGCGCAAATGTCTCTGC 59.901 61.111 8.75 0.00 35.14 4.26
3741 5862 1.503542 GCAAATGTCTCTGCGGTGG 59.496 57.895 0.00 0.00 0.00 4.61
3742 5863 1.503542 CAAATGTCTCTGCGGTGGC 59.496 57.895 0.00 0.00 40.52 5.01
3743 5864 1.675641 AAATGTCTCTGCGGTGGCC 60.676 57.895 0.00 0.00 38.85 5.36
3744 5865 3.628646 AATGTCTCTGCGGTGGCCC 62.629 63.158 0.00 0.00 38.85 5.80
3746 5867 4.767255 GTCTCTGCGGTGGCCCTG 62.767 72.222 0.00 0.00 38.85 4.45
3758 5879 3.483869 GCCCTGGGCTGGTCTAGG 61.484 72.222 30.42 0.00 46.69 3.02
3759 5880 2.770048 CCCTGGGCTGGTCTAGGG 60.770 72.222 9.17 9.17 43.56 3.53
3760 5881 3.483869 CCTGGGCTGGTCTAGGGC 61.484 72.222 0.00 0.00 0.00 5.19
3761 5882 3.483869 CTGGGCTGGTCTAGGGCC 61.484 72.222 0.00 0.00 46.56 5.80
3765 5886 3.483869 GCTGGTCTAGGGCCCAGG 61.484 72.222 27.56 16.44 46.83 4.45
3766 5887 3.483869 CTGGTCTAGGGCCCAGGC 61.484 72.222 27.56 20.28 43.74 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.864029 GCCAAAGCCAAGACGTCAAAC 60.864 52.381 19.50 4.01 0.00 2.93
1 2 0.383949 GCCAAAGCCAAGACGTCAAA 59.616 50.000 19.50 0.00 0.00 2.69
3 4 2.250939 CGCCAAAGCCAAGACGTCA 61.251 57.895 19.50 0.00 34.57 4.35
7 8 3.273080 CTGCCGCCAAAGCCAAGAC 62.273 63.158 0.00 0.00 34.57 3.01
27 28 6.488715 AGGAATTGGAGCTTCTTTATTCAGT 58.511 36.000 13.50 2.52 0.00 3.41
74 75 0.670162 GAAATCCATCACCGGCCATG 59.330 55.000 0.00 3.39 0.00 3.66
79 80 1.014352 GTTCCGAAATCCATCACCGG 58.986 55.000 0.00 0.00 41.36 5.28
93 94 2.069273 CACTTGAACAGGCTAGTTCCG 58.931 52.381 19.85 15.19 45.62 4.30
120 121 4.697756 ATGTCGCCACCACCACGG 62.698 66.667 0.00 0.00 42.50 4.94
172 173 1.442857 GGAGCAGACGTCGTCACAG 60.443 63.158 26.17 16.23 34.60 3.66
193 194 2.664851 CCAAGCTTCACGTCGGCA 60.665 61.111 0.00 0.00 0.00 5.69
269 278 1.648720 CACAAACCCAGCACACGAG 59.351 57.895 0.00 0.00 0.00 4.18
340 356 4.806247 GTCATCAAACTCCGGATCTAACAG 59.194 45.833 3.57 0.00 0.00 3.16
350 366 1.124297 CGAACACGTCATCAAACTCCG 59.876 52.381 0.00 0.00 0.00 4.63
369 411 1.344438 TCATATAGGGGCAGCACTTCG 59.656 52.381 0.00 0.00 0.00 3.79
370 412 3.710209 ATCATATAGGGGCAGCACTTC 57.290 47.619 0.00 0.00 0.00 3.01
386 2058 5.452078 ACCATTGTTGTTGAACGAATCAT 57.548 34.783 0.00 0.00 38.03 2.45
440 2112 3.070878 TCCATCGCTGATATGCAGGTTTA 59.929 43.478 0.00 0.00 45.03 2.01
514 2186 3.800685 CTCGGCACCACCACAACGA 62.801 63.158 0.00 0.00 39.03 3.85
516 2188 2.978010 CCTCGGCACCACCACAAC 60.978 66.667 0.00 0.00 39.03 3.32
543 2215 1.676006 CCTGAGTTTGACACCAACACC 59.324 52.381 0.00 0.00 30.88 4.16
545 2217 1.409521 CCCCTGAGTTTGACACCAACA 60.410 52.381 0.00 0.00 30.88 3.33
546 2218 1.133915 TCCCCTGAGTTTGACACCAAC 60.134 52.381 0.00 0.00 30.88 3.77
554 2226 2.618709 GCCGATAAATCCCCTGAGTTTG 59.381 50.000 0.00 0.00 30.29 2.93
560 2232 1.142870 TCAAGGCCGATAAATCCCCTG 59.857 52.381 0.00 0.00 0.00 4.45
561 2233 1.518367 TCAAGGCCGATAAATCCCCT 58.482 50.000 0.00 0.00 0.00 4.79
569 2241 9.974980 GGAAATAAAATAAAATCAAGGCCGATA 57.025 29.630 0.00 0.00 0.00 2.92
570 2242 7.931407 GGGAAATAAAATAAAATCAAGGCCGAT 59.069 33.333 0.00 0.00 0.00 4.18
613 2285 1.400242 GCCGCTAGTCTTTGCACAAAG 60.400 52.381 15.45 15.45 46.82 2.77
620 2296 3.490890 GCAGGCCGCTAGTCTTTG 58.509 61.111 11.61 0.00 37.77 2.77
633 2309 5.664457 TGACAATACTCATAAGACAGCAGG 58.336 41.667 0.00 0.00 0.00 4.85
637 2313 5.974158 CGACCTGACAATACTCATAAGACAG 59.026 44.000 0.00 0.00 0.00 3.51
644 2320 2.832129 ACACCGACCTGACAATACTCAT 59.168 45.455 0.00 0.00 0.00 2.90
650 2326 2.526432 AGTAGACACCGACCTGACAAT 58.474 47.619 0.00 0.00 0.00 2.71
657 2333 2.140717 CAAACCAAGTAGACACCGACC 58.859 52.381 0.00 0.00 0.00 4.79
742 2420 7.508977 ACCCTCTAGAAAAATCAAACCAAATCA 59.491 33.333 0.00 0.00 0.00 2.57
754 2432 7.669089 TCAAACCAAAACCCTCTAGAAAAAT 57.331 32.000 0.00 0.00 0.00 1.82
756 2434 7.669089 AATCAAACCAAAACCCTCTAGAAAA 57.331 32.000 0.00 0.00 0.00 2.29
760 2438 6.816136 ACAAAATCAAACCAAAACCCTCTAG 58.184 36.000 0.00 0.00 0.00 2.43
764 2442 6.155393 TCACTACAAAATCAAACCAAAACCCT 59.845 34.615 0.00 0.00 0.00 4.34
766 2444 6.019075 GCTCACTACAAAATCAAACCAAAACC 60.019 38.462 0.00 0.00 0.00 3.27
771 2449 3.304391 GCGCTCACTACAAAATCAAACCA 60.304 43.478 0.00 0.00 0.00 3.67
773 2451 3.908382 CAGCGCTCACTACAAAATCAAAC 59.092 43.478 7.13 0.00 0.00 2.93
776 2454 1.464608 GCAGCGCTCACTACAAAATCA 59.535 47.619 7.13 0.00 0.00 2.57
847 2525 1.469335 GGGATCTTGGCCGTCCGATA 61.469 60.000 0.00 0.00 32.71 2.92
859 2537 1.383248 CCGAGGGTGAGGGGATCTT 60.383 63.158 0.00 0.00 0.00 2.40
905 2591 1.988846 AGGGGAAGGAGAAACTGGAAG 59.011 52.381 0.00 0.00 42.29 3.46
975 2661 0.036294 GAGGTTAGGGTTTGCTCGCT 60.036 55.000 0.00 0.00 34.99 4.93
1393 3106 2.038952 AGGCACAATCACTCAGCTACAA 59.961 45.455 0.00 0.00 0.00 2.41
1561 3473 6.748333 ATAGTGTTCAATCAGACATTGGTG 57.252 37.500 0.00 0.00 0.00 4.17
1598 3514 3.136443 TGGATCCACAGAAACAACTCAGT 59.864 43.478 11.44 0.00 0.00 3.41
1632 3551 2.313317 ACACGTGAAGGTCCAGTAGAA 58.687 47.619 25.01 0.00 0.00 2.10
1643 3563 3.120991 GCAGCACTAAGTAACACGTGAAG 60.121 47.826 25.01 11.21 0.00 3.02
1647 3567 1.069513 TGGCAGCACTAAGTAACACGT 59.930 47.619 0.00 0.00 0.00 4.49
1680 3621 8.059798 ACAAGACAATCAGCAGCTTAAATTAT 57.940 30.769 0.00 0.00 0.00 1.28
1681 3622 7.452880 ACAAGACAATCAGCAGCTTAAATTA 57.547 32.000 0.00 0.00 0.00 1.40
1682 3623 6.336842 ACAAGACAATCAGCAGCTTAAATT 57.663 33.333 0.00 0.00 0.00 1.82
1691 3632 9.591792 GCTATGATATATACAAGACAATCAGCA 57.408 33.333 0.00 0.00 0.00 4.41
1840 3818 1.002134 GAAGCAGCCCTGGCACTTA 60.002 57.895 11.38 0.00 44.88 2.24
1947 3927 4.597404 TGGCAATGTGATGTTAGCAAAA 57.403 36.364 0.00 0.00 0.00 2.44
1966 3946 6.616260 GCAAGAACGTTTTAAAAGCATCATGG 60.616 38.462 0.46 0.00 0.00 3.66
2015 4004 2.124507 TACTTGGCAGCCCACTCACC 62.125 60.000 9.64 0.00 41.97 4.02
2035 4027 6.644347 AGCAGTAGAATACACTATGCACTTT 58.356 36.000 0.00 0.00 46.26 2.66
2037 4029 5.860941 AGCAGTAGAATACACTATGCACT 57.139 39.130 0.00 0.00 46.26 4.40
2047 4039 8.557029 AGTACAAAACACAAAGCAGTAGAATAC 58.443 33.333 0.00 0.00 43.47 1.89
2069 4061 1.685517 GTTATGGGACGGAGGGAGTAC 59.314 57.143 0.00 0.00 0.00 2.73
2070 4062 1.288633 TGTTATGGGACGGAGGGAGTA 59.711 52.381 0.00 0.00 0.00 2.59
2071 4063 0.042131 TGTTATGGGACGGAGGGAGT 59.958 55.000 0.00 0.00 0.00 3.85
2072 4064 1.424638 ATGTTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
2073 4065 2.779429 TATGTTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
2074 4066 2.969950 TCTTATGTTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
2075 4067 3.555168 GCTCTTATGTTATGGGACGGAGG 60.555 52.174 0.00 0.00 0.00 4.30
2076 4068 3.654414 GCTCTTATGTTATGGGACGGAG 58.346 50.000 0.00 0.00 0.00 4.63
2077 4069 2.035449 CGCTCTTATGTTATGGGACGGA 59.965 50.000 0.00 0.00 0.00 4.69
2078 4070 2.223971 ACGCTCTTATGTTATGGGACGG 60.224 50.000 0.00 0.00 0.00 4.79
2079 4071 3.093717 ACGCTCTTATGTTATGGGACG 57.906 47.619 0.00 0.00 0.00 4.79
2080 4072 5.813080 AAAACGCTCTTATGTTATGGGAC 57.187 39.130 0.00 0.00 0.00 4.46
2121 4113 6.183360 CCGTCCCATAACATAAGAGCATTTTT 60.183 38.462 0.00 0.00 0.00 1.94
2122 4114 5.299279 CCGTCCCATAACATAAGAGCATTTT 59.701 40.000 0.00 0.00 0.00 1.82
2123 4115 4.821805 CCGTCCCATAACATAAGAGCATTT 59.178 41.667 0.00 0.00 0.00 2.32
2124 4116 4.102524 TCCGTCCCATAACATAAGAGCATT 59.897 41.667 0.00 0.00 0.00 3.56
2125 4117 3.646162 TCCGTCCCATAACATAAGAGCAT 59.354 43.478 0.00 0.00 0.00 3.79
2126 4118 3.035363 TCCGTCCCATAACATAAGAGCA 58.965 45.455 0.00 0.00 0.00 4.26
2127 4119 3.555168 CCTCCGTCCCATAACATAAGAGC 60.555 52.174 0.00 0.00 0.00 4.09
2128 4120 3.006967 CCCTCCGTCCCATAACATAAGAG 59.993 52.174 0.00 0.00 0.00 2.85
2129 4121 2.969950 CCCTCCGTCCCATAACATAAGA 59.030 50.000 0.00 0.00 0.00 2.10
2130 4122 2.969950 TCCCTCCGTCCCATAACATAAG 59.030 50.000 0.00 0.00 0.00 1.73
2131 4123 2.969950 CTCCCTCCGTCCCATAACATAA 59.030 50.000 0.00 0.00 0.00 1.90
2132 4124 2.090943 ACTCCCTCCGTCCCATAACATA 60.091 50.000 0.00 0.00 0.00 2.29
2133 4125 1.344087 ACTCCCTCCGTCCCATAACAT 60.344 52.381 0.00 0.00 0.00 2.71
2134 4126 0.042131 ACTCCCTCCGTCCCATAACA 59.958 55.000 0.00 0.00 0.00 2.41
2135 4127 1.685517 GTACTCCCTCCGTCCCATAAC 59.314 57.143 0.00 0.00 0.00 1.89
2136 4128 1.572415 AGTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
2137 4129 1.229131 AGTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
2138 4130 0.338814 AAGTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
2139 4131 0.115745 AAAGTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
2140 4132 2.030371 CTAAAGTACTCCCTCCGTCCC 58.970 57.143 0.00 0.00 0.00 4.46
2141 4133 2.732763 ACTAAAGTACTCCCTCCGTCC 58.267 52.381 0.00 0.00 0.00 4.79
2142 4134 4.891627 GTACTAAAGTACTCCCTCCGTC 57.108 50.000 12.10 0.00 45.47 4.79
2247 4252 5.438761 ACTCAAGTAAATGCAGAACCAAC 57.561 39.130 0.00 0.00 0.00 3.77
2253 4259 7.254898 GCAGCATATAACTCAAGTAAATGCAGA 60.255 37.037 18.56 0.00 38.71 4.26
2261 4267 6.978659 GTGTACAGCAGCATATAACTCAAGTA 59.021 38.462 0.00 0.00 0.00 2.24
2262 4268 5.812642 GTGTACAGCAGCATATAACTCAAGT 59.187 40.000 0.00 0.00 0.00 3.16
2263 4269 5.235186 GGTGTACAGCAGCATATAACTCAAG 59.765 44.000 19.87 0.00 44.44 3.02
2265 4271 4.442893 GGGTGTACAGCAGCATATAACTCA 60.443 45.833 25.23 0.00 46.68 3.41
2266 4272 4.058817 GGGTGTACAGCAGCATATAACTC 58.941 47.826 25.23 0.95 46.68 3.01
2267 4273 3.181454 GGGGTGTACAGCAGCATATAACT 60.181 47.826 25.23 0.00 46.68 2.24
2268 4274 3.139077 GGGGTGTACAGCAGCATATAAC 58.861 50.000 25.23 5.61 46.68 1.89
2269 4275 2.774809 TGGGGTGTACAGCAGCATATAA 59.225 45.455 25.23 0.11 46.68 0.98
2270 4276 2.368548 CTGGGGTGTACAGCAGCATATA 59.631 50.000 25.23 3.73 46.68 0.86
2275 4284 1.073199 AACTGGGGTGTACAGCAGC 59.927 57.895 25.23 9.80 44.33 5.25
2280 4289 2.553466 GGTAATGCAACTGGGGTGTACA 60.553 50.000 0.00 0.00 0.00 2.90
2336 4349 9.667107 AGCAGTAAGTAAGCAGTGATTTATTAA 57.333 29.630 0.00 0.00 0.00 1.40
2337 4350 9.098355 CAGCAGTAAGTAAGCAGTGATTTATTA 57.902 33.333 0.00 0.00 0.00 0.98
2338 4351 7.607991 ACAGCAGTAAGTAAGCAGTGATTTATT 59.392 33.333 0.00 0.00 0.00 1.40
2339 4352 7.106239 ACAGCAGTAAGTAAGCAGTGATTTAT 58.894 34.615 0.00 0.00 0.00 1.40
2351 4364 7.429636 GTGGAACAATTACAGCAGTAAGTAA 57.570 36.000 7.79 0.00 44.16 2.24
2380 4393 7.307632 GCACAGGACAGTGATAATTCATGATAC 60.308 40.741 0.00 0.00 42.05 2.24
2381 4394 6.707608 GCACAGGACAGTGATAATTCATGATA 59.292 38.462 0.00 0.00 42.05 2.15
2385 4400 5.108187 AGCACAGGACAGTGATAATTCAT 57.892 39.130 0.00 0.00 42.05 2.57
2391 4406 6.538742 GCTTAAAATAGCACAGGACAGTGATA 59.461 38.462 0.00 0.00 43.56 2.15
2396 4411 7.559590 AATAGCTTAAAATAGCACAGGACAG 57.440 36.000 0.00 0.00 43.68 3.51
2471 4495 8.512956 GGTCCAAATGAGATGATAAATGATGAG 58.487 37.037 0.00 0.00 0.00 2.90
2472 4496 8.000127 TGGTCCAAATGAGATGATAAATGATGA 59.000 33.333 0.00 0.00 0.00 2.92
2473 4497 8.173542 TGGTCCAAATGAGATGATAAATGATG 57.826 34.615 0.00 0.00 0.00 3.07
2474 4498 8.803235 CATGGTCCAAATGAGATGATAAATGAT 58.197 33.333 0.00 0.00 0.00 2.45
2475 4499 8.000127 TCATGGTCCAAATGAGATGATAAATGA 59.000 33.333 0.00 0.00 30.61 2.57
2477 4501 8.951614 ATCATGGTCCAAATGAGATGATAAAT 57.048 30.769 0.00 0.00 37.46 1.40
2478 4502 8.771521 AATCATGGTCCAAATGAGATGATAAA 57.228 30.769 0.00 0.00 37.46 1.40
2479 4503 8.771521 AAATCATGGTCCAAATGAGATGATAA 57.228 30.769 0.00 0.00 37.46 1.75
2562 4637 2.798283 CTGCAATCACAGCAAAAAGTGG 59.202 45.455 0.00 0.00 42.17 4.00
2572 4647 3.754955 CACAATAGTGCTGCAATCACAG 58.245 45.455 5.62 0.00 39.21 3.66
2573 4648 3.835378 CACAATAGTGCTGCAATCACA 57.165 42.857 5.62 0.00 39.21 3.58
2585 4660 3.523564 AGGGCCATACTGAACACAATAGT 59.476 43.478 6.18 0.00 0.00 2.12
2586 4661 4.156455 AGGGCCATACTGAACACAATAG 57.844 45.455 6.18 0.00 0.00 1.73
2587 4662 4.584638 AAGGGCCATACTGAACACAATA 57.415 40.909 6.18 0.00 0.00 1.90
2588 4663 3.456380 AAGGGCCATACTGAACACAAT 57.544 42.857 6.18 0.00 0.00 2.71
2589 4664 2.969821 AAGGGCCATACTGAACACAA 57.030 45.000 6.18 0.00 0.00 3.33
2590 4665 2.969821 AAAGGGCCATACTGAACACA 57.030 45.000 6.18 0.00 0.00 3.72
2615 4690 9.354673 AGAAAAGAGAAATTCAGTAATCAACCA 57.645 29.630 0.00 0.00 0.00 3.67
2616 4691 9.617975 CAGAAAAGAGAAATTCAGTAATCAACC 57.382 33.333 0.00 0.00 0.00 3.77
2619 4694 9.559732 TCACAGAAAAGAGAAATTCAGTAATCA 57.440 29.630 0.00 0.00 0.00 2.57
2623 4698 8.292448 GCAATCACAGAAAAGAGAAATTCAGTA 58.708 33.333 0.00 0.00 0.00 2.74
2624 4699 7.144000 GCAATCACAGAAAAGAGAAATTCAGT 58.856 34.615 0.00 0.00 0.00 3.41
2625 4700 7.143340 TGCAATCACAGAAAAGAGAAATTCAG 58.857 34.615 0.00 0.00 0.00 3.02
2626 4701 7.041635 TGCAATCACAGAAAAGAGAAATTCA 57.958 32.000 0.00 0.00 0.00 2.57
2627 4702 6.089150 GCTGCAATCACAGAAAAGAGAAATTC 59.911 38.462 0.00 0.00 40.25 2.17
2628 4703 5.924825 GCTGCAATCACAGAAAAGAGAAATT 59.075 36.000 0.00 0.00 40.25 1.82
2629 4704 5.010314 TGCTGCAATCACAGAAAAGAGAAAT 59.990 36.000 0.00 0.00 40.25 2.17
2630 4705 4.338964 TGCTGCAATCACAGAAAAGAGAAA 59.661 37.500 0.00 0.00 40.25 2.52
2631 4706 3.884693 TGCTGCAATCACAGAAAAGAGAA 59.115 39.130 0.00 0.00 40.25 2.87
2632 4707 3.251729 GTGCTGCAATCACAGAAAAGAGA 59.748 43.478 2.77 0.00 40.25 3.10
2796 4871 2.535331 TCAACAACGGCTTGCTTTTTC 58.465 42.857 0.00 0.00 0.00 2.29
2908 4985 9.982651 AACATAGTACAGTGGTCATCATAATAC 57.017 33.333 0.00 0.00 0.00 1.89
3041 5119 9.448294 GCAAATTCAAGCAATAAACATTTCAAA 57.552 25.926 0.00 0.00 0.00 2.69
3061 5139 8.885494 ACAAATAATGTAACACACAGCAAATT 57.115 26.923 0.00 0.00 41.63 1.82
3071 5149 7.223777 AGGTGCAACAAACAAATAATGTAACAC 59.776 33.333 3.64 0.00 39.54 3.32
3099 5183 2.593978 CTGGGGAGGCATCAGGTG 59.406 66.667 0.00 0.00 0.00 4.00
3100 5184 2.693864 CCTGGGGAGGCATCAGGT 60.694 66.667 0.00 0.00 42.17 4.00
3128 5234 2.143925 GTAAAGAAGACGGCAAGCAGT 58.856 47.619 0.00 0.00 0.00 4.40
3130 5236 1.144969 CGTAAAGAAGACGGCAAGCA 58.855 50.000 0.00 0.00 36.66 3.91
3146 5252 7.498900 ACAAAGGCATCAGATTGATTATTCGTA 59.501 33.333 0.00 0.00 34.28 3.43
3157 5266 2.002586 CGACGACAAAGGCATCAGATT 58.997 47.619 0.00 0.00 0.00 2.40
3162 5271 0.669318 TGGTCGACGACAAAGGCATC 60.669 55.000 27.77 9.64 33.68 3.91
3173 5294 0.101759 ATACCGTTGGATGGTCGACG 59.898 55.000 9.92 0.00 38.67 5.12
3177 5298 1.139058 AGAGCATACCGTTGGATGGTC 59.861 52.381 8.55 8.55 46.27 4.02
3188 5309 0.175760 TGTCCGCAGAAGAGCATACC 59.824 55.000 0.00 0.00 0.00 2.73
3202 5323 3.067106 GGGCATACAATATCTGTGTCCG 58.933 50.000 0.00 0.00 39.20 4.79
3205 5326 5.893255 ACATTTGGGCATACAATATCTGTGT 59.107 36.000 0.00 0.00 39.20 3.72
3208 5329 6.698329 CACAACATTTGGGCATACAATATCTG 59.302 38.462 0.00 0.00 34.12 2.90
3214 5335 3.386078 ACACACAACATTTGGGCATACAA 59.614 39.130 0.00 0.00 37.68 2.41
3215 5336 2.961741 ACACACAACATTTGGGCATACA 59.038 40.909 0.00 0.00 37.68 2.29
3224 5345 5.816258 TCATTCAAATGCACACACAACATTT 59.184 32.000 0.00 0.00 43.01 2.32
3225 5346 5.358090 TCATTCAAATGCACACACAACATT 58.642 33.333 0.00 0.00 36.36 2.71
3227 5348 4.382345 TCATTCAAATGCACACACAACA 57.618 36.364 0.00 0.00 36.36 3.33
3231 5352 6.528014 TCAATTTCATTCAAATGCACACAC 57.472 33.333 0.00 0.00 34.69 3.82
3234 5355 7.549615 TTGTTCAATTTCATTCAAATGCACA 57.450 28.000 0.00 0.00 34.69 4.57
3235 5356 7.376601 GGTTTGTTCAATTTCATTCAAATGCAC 59.623 33.333 0.00 0.00 34.69 4.57
3236 5357 7.416022 GGTTTGTTCAATTTCATTCAAATGCA 58.584 30.769 0.00 0.00 34.69 3.96
3238 5359 7.042187 TCCGGTTTGTTCAATTTCATTCAAATG 60.042 33.333 0.00 0.00 34.69 2.32
3261 5382 5.516339 GTCCAGTTTGCATAAAATTCATCCG 59.484 40.000 0.00 0.00 0.00 4.18
3266 5387 8.538409 AATTCAGTCCAGTTTGCATAAAATTC 57.462 30.769 0.00 0.00 0.00 2.17
3278 5399 5.716228 TGGATATTGCAAATTCAGTCCAGTT 59.284 36.000 1.71 0.00 31.39 3.16
3296 5417 8.260818 CCAAGGTCGAATAATGAGTATGGATAT 58.739 37.037 0.00 0.00 0.00 1.63
3297 5418 7.453439 TCCAAGGTCGAATAATGAGTATGGATA 59.547 37.037 0.00 0.00 0.00 2.59
3298 5419 6.270000 TCCAAGGTCGAATAATGAGTATGGAT 59.730 38.462 0.00 0.00 0.00 3.41
3299 5420 5.600898 TCCAAGGTCGAATAATGAGTATGGA 59.399 40.000 0.00 0.00 0.00 3.41
3302 5423 6.479972 TGTCCAAGGTCGAATAATGAGTAT 57.520 37.500 0.00 0.00 0.00 2.12
3311 5432 3.454447 TGTATCCATGTCCAAGGTCGAAT 59.546 43.478 0.00 0.00 0.00 3.34
3313 5434 2.430694 CTGTATCCATGTCCAAGGTCGA 59.569 50.000 0.00 0.00 0.00 4.20
3316 5437 2.845659 TCCTGTATCCATGTCCAAGGT 58.154 47.619 0.00 0.00 0.00 3.50
3337 5458 1.883275 CGGTTGAATGGCAAACTACCA 59.117 47.619 20.13 0.00 42.15 3.25
3338 5459 1.883926 ACGGTTGAATGGCAAACTACC 59.116 47.619 14.11 14.11 42.15 3.18
3339 5460 4.957759 ATACGGTTGAATGGCAAACTAC 57.042 40.909 0.00 0.00 42.15 2.73
3340 5461 6.174760 AGTTATACGGTTGAATGGCAAACTA 58.825 36.000 0.00 0.00 42.15 2.24
3341 5462 5.007682 AGTTATACGGTTGAATGGCAAACT 58.992 37.500 0.00 0.00 42.15 2.66
3342 5463 5.305139 AGTTATACGGTTGAATGGCAAAC 57.695 39.130 0.00 0.00 40.89 2.93
3343 5464 6.018588 CGATAGTTATACGGTTGAATGGCAAA 60.019 38.462 0.00 0.00 38.44 3.68
3344 5465 5.464057 CGATAGTTATACGGTTGAATGGCAA 59.536 40.000 0.00 0.00 0.00 4.52
3345 5466 4.986034 CGATAGTTATACGGTTGAATGGCA 59.014 41.667 0.00 0.00 0.00 4.92
3346 5467 4.143179 GCGATAGTTATACGGTTGAATGGC 60.143 45.833 0.00 0.00 39.35 4.40
3347 5468 5.227908 AGCGATAGTTATACGGTTGAATGG 58.772 41.667 0.00 0.00 34.20 3.16
3348 5469 6.033619 GCTAGCGATAGTTATACGGTTGAATG 59.966 42.308 9.80 0.00 38.59 2.67
3349 5470 6.091437 GCTAGCGATAGTTATACGGTTGAAT 58.909 40.000 9.80 0.00 38.59 2.57
3350 5471 5.008911 TGCTAGCGATAGTTATACGGTTGAA 59.991 40.000 10.77 0.00 38.59 2.69
3351 5472 4.516321 TGCTAGCGATAGTTATACGGTTGA 59.484 41.667 10.77 0.00 38.59 3.18
3352 5473 4.790878 TGCTAGCGATAGTTATACGGTTG 58.209 43.478 10.77 0.00 38.59 3.77
3353 5474 5.640189 ATGCTAGCGATAGTTATACGGTT 57.360 39.130 10.77 0.00 38.59 4.44
3354 5475 5.640189 AATGCTAGCGATAGTTATACGGT 57.360 39.130 10.77 0.00 40.60 4.83
3355 5476 6.365247 ACAAAATGCTAGCGATAGTTATACGG 59.635 38.462 10.77 0.00 39.35 4.02
3356 5477 7.334574 ACAAAATGCTAGCGATAGTTATACG 57.665 36.000 10.77 0.00 39.35 3.06
3359 5480 9.489084 TTCATACAAAATGCTAGCGATAGTTAT 57.511 29.630 10.77 1.85 39.35 1.89
3360 5481 8.880878 TTCATACAAAATGCTAGCGATAGTTA 57.119 30.769 10.77 0.00 39.35 2.24
3361 5482 7.786178 TTCATACAAAATGCTAGCGATAGTT 57.214 32.000 10.77 0.00 39.35 2.24
3362 5483 7.786178 TTTCATACAAAATGCTAGCGATAGT 57.214 32.000 10.77 7.49 39.35 2.12
3363 5484 9.669353 AATTTTCATACAAAATGCTAGCGATAG 57.331 29.630 10.77 2.61 30.94 2.08
3364 5485 9.449550 CAATTTTCATACAAAATGCTAGCGATA 57.550 29.630 10.77 0.00 30.94 2.92
3365 5486 8.190122 TCAATTTTCATACAAAATGCTAGCGAT 58.810 29.630 10.77 1.95 30.94 4.58
3366 5487 7.484641 GTCAATTTTCATACAAAATGCTAGCGA 59.515 33.333 10.77 0.00 30.94 4.93
3367 5488 7.253750 GGTCAATTTTCATACAAAATGCTAGCG 60.254 37.037 10.77 0.00 30.94 4.26
3368 5489 7.545265 TGGTCAATTTTCATACAAAATGCTAGC 59.455 33.333 8.10 8.10 30.94 3.42
3369 5490 8.863049 GTGGTCAATTTTCATACAAAATGCTAG 58.137 33.333 0.00 0.00 30.94 3.42
3370 5491 8.363390 TGTGGTCAATTTTCATACAAAATGCTA 58.637 29.630 0.00 0.00 30.94 3.49
3371 5492 7.171337 GTGTGGTCAATTTTCATACAAAATGCT 59.829 33.333 0.00 0.00 30.94 3.79
3372 5493 7.290118 GTGTGGTCAATTTTCATACAAAATGC 58.710 34.615 0.00 0.00 30.94 3.56
3373 5494 7.380870 TCGTGTGGTCAATTTTCATACAAAATG 59.619 33.333 0.00 0.00 30.94 2.32
3374 5495 7.429633 TCGTGTGGTCAATTTTCATACAAAAT 58.570 30.769 0.00 0.00 0.00 1.82
3375 5496 6.796426 TCGTGTGGTCAATTTTCATACAAAA 58.204 32.000 0.00 0.00 0.00 2.44
3376 5497 6.261158 TCTCGTGTGGTCAATTTTCATACAAA 59.739 34.615 0.00 0.00 0.00 2.83
3377 5498 5.760743 TCTCGTGTGGTCAATTTTCATACAA 59.239 36.000 0.00 0.00 0.00 2.41
3378 5499 5.301555 TCTCGTGTGGTCAATTTTCATACA 58.698 37.500 0.00 0.00 0.00 2.29
3379 5500 5.856126 TCTCGTGTGGTCAATTTTCATAC 57.144 39.130 0.00 0.00 0.00 2.39
3380 5501 6.169800 TCATCTCGTGTGGTCAATTTTCATA 58.830 36.000 0.00 0.00 0.00 2.15
3381 5502 5.003160 TCATCTCGTGTGGTCAATTTTCAT 58.997 37.500 0.00 0.00 0.00 2.57
3382 5503 4.384940 TCATCTCGTGTGGTCAATTTTCA 58.615 39.130 0.00 0.00 0.00 2.69
3383 5504 5.356882 TTCATCTCGTGTGGTCAATTTTC 57.643 39.130 0.00 0.00 0.00 2.29
3384 5505 5.964958 ATTCATCTCGTGTGGTCAATTTT 57.035 34.783 0.00 0.00 0.00 1.82
3385 5506 5.964958 AATTCATCTCGTGTGGTCAATTT 57.035 34.783 0.00 0.00 0.00 1.82
3386 5507 5.473162 TGAAATTCATCTCGTGTGGTCAATT 59.527 36.000 0.00 0.00 0.00 2.32
3387 5508 5.003160 TGAAATTCATCTCGTGTGGTCAAT 58.997 37.500 0.00 0.00 0.00 2.57
3388 5509 4.384940 TGAAATTCATCTCGTGTGGTCAA 58.615 39.130 0.00 0.00 0.00 3.18
3389 5510 4.001618 TGAAATTCATCTCGTGTGGTCA 57.998 40.909 0.00 0.00 0.00 4.02
3390 5511 4.728882 GCATGAAATTCATCTCGTGTGGTC 60.729 45.833 5.36 0.00 34.28 4.02
3391 5512 3.127548 GCATGAAATTCATCTCGTGTGGT 59.872 43.478 5.36 0.00 34.28 4.16
3392 5513 3.127376 TGCATGAAATTCATCTCGTGTGG 59.873 43.478 5.36 0.00 34.28 4.17
3393 5514 4.345271 TGCATGAAATTCATCTCGTGTG 57.655 40.909 5.36 0.00 34.28 3.82
3394 5515 4.142534 CCTTGCATGAAATTCATCTCGTGT 60.143 41.667 5.36 0.00 34.28 4.49
3395 5516 4.348656 CCTTGCATGAAATTCATCTCGTG 58.651 43.478 5.36 0.00 34.28 4.35
3396 5517 3.181493 GCCTTGCATGAAATTCATCTCGT 60.181 43.478 5.36 0.00 34.28 4.18
3397 5518 3.369385 GCCTTGCATGAAATTCATCTCG 58.631 45.455 5.36 0.00 34.28 4.04
3398 5519 3.065786 TCGCCTTGCATGAAATTCATCTC 59.934 43.478 5.36 2.01 34.28 2.75
3399 5520 3.018856 TCGCCTTGCATGAAATTCATCT 58.981 40.909 5.36 0.00 34.28 2.90
3400 5521 3.425577 TCGCCTTGCATGAAATTCATC 57.574 42.857 5.36 2.47 34.28 2.92
3401 5522 3.872511 TTCGCCTTGCATGAAATTCAT 57.127 38.095 2.07 2.07 37.65 2.57
3402 5523 3.193056 TCATTCGCCTTGCATGAAATTCA 59.807 39.130 0.00 0.00 0.00 2.57
3403 5524 3.772932 TCATTCGCCTTGCATGAAATTC 58.227 40.909 0.00 0.00 0.00 2.17
3404 5525 3.872511 TCATTCGCCTTGCATGAAATT 57.127 38.095 0.00 0.00 0.00 1.82
3405 5526 3.872511 TTCATTCGCCTTGCATGAAAT 57.127 38.095 0.00 0.00 0.00 2.17
3406 5527 3.872511 ATTCATTCGCCTTGCATGAAA 57.127 38.095 0.00 0.00 35.28 2.69
3407 5528 3.872511 AATTCATTCGCCTTGCATGAA 57.127 38.095 0.00 0.00 35.97 2.57
3408 5529 3.872511 AAATTCATTCGCCTTGCATGA 57.127 38.095 0.00 0.00 0.00 3.07
3409 5530 5.557514 GCATTAAATTCATTCGCCTTGCATG 60.558 40.000 0.00 0.00 0.00 4.06
3410 5531 4.508861 GCATTAAATTCATTCGCCTTGCAT 59.491 37.500 0.00 0.00 0.00 3.96
3411 5532 3.864583 GCATTAAATTCATTCGCCTTGCA 59.135 39.130 0.00 0.00 0.00 4.08
3412 5533 3.864583 TGCATTAAATTCATTCGCCTTGC 59.135 39.130 0.00 0.00 0.00 4.01
3413 5534 6.406093 TTTGCATTAAATTCATTCGCCTTG 57.594 33.333 0.00 0.00 0.00 3.61
3414 5535 7.414319 CCAATTTGCATTAAATTCATTCGCCTT 60.414 33.333 0.00 0.00 44.93 4.35
3415 5536 6.037391 CCAATTTGCATTAAATTCATTCGCCT 59.963 34.615 0.00 0.00 44.93 5.52
3416 5537 6.036953 TCCAATTTGCATTAAATTCATTCGCC 59.963 34.615 0.00 0.00 44.93 5.54
3417 5538 6.901357 GTCCAATTTGCATTAAATTCATTCGC 59.099 34.615 0.00 0.00 44.93 4.70
3418 5539 7.278424 AGGTCCAATTTGCATTAAATTCATTCG 59.722 33.333 0.00 0.00 44.93 3.34
3419 5540 8.496707 AGGTCCAATTTGCATTAAATTCATTC 57.503 30.769 0.00 0.00 44.93 2.67
3420 5541 9.956640 TTAGGTCCAATTTGCATTAAATTCATT 57.043 25.926 0.00 0.00 44.93 2.57
3422 5543 9.956640 AATTAGGTCCAATTTGCATTAAATTCA 57.043 25.926 0.00 0.00 44.93 2.57
3426 5547 9.381033 CATGAATTAGGTCCAATTTGCATTAAA 57.619 29.630 0.00 0.00 0.00 1.52
3427 5548 8.538701 ACATGAATTAGGTCCAATTTGCATTAA 58.461 29.630 0.00 0.00 0.00 1.40
3428 5549 8.076910 ACATGAATTAGGTCCAATTTGCATTA 57.923 30.769 0.00 0.00 0.00 1.90
3429 5550 6.949715 ACATGAATTAGGTCCAATTTGCATT 58.050 32.000 0.00 0.00 0.00 3.56
3430 5551 6.549433 ACATGAATTAGGTCCAATTTGCAT 57.451 33.333 0.00 0.00 0.00 3.96
3431 5552 5.999205 ACATGAATTAGGTCCAATTTGCA 57.001 34.783 0.00 0.00 0.00 4.08
3432 5553 7.319646 TGTAACATGAATTAGGTCCAATTTGC 58.680 34.615 0.00 0.00 0.00 3.68
3461 5582 9.995003 AGCTGAATTTGTCCAATTTTAATGTAA 57.005 25.926 0.00 0.00 35.02 2.41
3462 5583 9.995003 AAGCTGAATTTGTCCAATTTTAATGTA 57.005 25.926 0.00 0.00 35.02 2.29
3463 5584 8.907222 AAGCTGAATTTGTCCAATTTTAATGT 57.093 26.923 0.00 0.00 35.02 2.71
3510 5631 3.630312 ACATTGTCACTAGCGTGGTTTTT 59.370 39.130 0.00 0.00 41.53 1.94
3511 5632 3.211045 ACATTGTCACTAGCGTGGTTTT 58.789 40.909 0.00 0.00 41.53 2.43
3512 5633 2.846193 ACATTGTCACTAGCGTGGTTT 58.154 42.857 0.00 0.00 41.53 3.27
3513 5634 2.543777 ACATTGTCACTAGCGTGGTT 57.456 45.000 0.00 0.00 41.53 3.67
3514 5635 3.521560 CATACATTGTCACTAGCGTGGT 58.478 45.455 0.00 0.00 41.53 4.16
3515 5636 2.285220 GCATACATTGTCACTAGCGTGG 59.715 50.000 0.00 0.00 41.53 4.94
3516 5637 2.929398 TGCATACATTGTCACTAGCGTG 59.071 45.455 0.00 0.00 42.59 5.34
3517 5638 3.245518 TGCATACATTGTCACTAGCGT 57.754 42.857 0.00 0.00 0.00 5.07
3518 5639 3.605461 GCATGCATACATTGTCACTAGCG 60.605 47.826 14.21 0.00 32.87 4.26
3519 5640 3.562973 AGCATGCATACATTGTCACTAGC 59.437 43.478 21.98 0.00 32.87 3.42
3520 5641 4.084693 CGAGCATGCATACATTGTCACTAG 60.085 45.833 21.98 0.00 32.87 2.57
3521 5642 3.803778 CGAGCATGCATACATTGTCACTA 59.196 43.478 21.98 0.00 32.87 2.74
3522 5643 2.610833 CGAGCATGCATACATTGTCACT 59.389 45.455 21.98 0.00 32.87 3.41
3523 5644 2.852143 GCGAGCATGCATACATTGTCAC 60.852 50.000 21.98 0.00 32.87 3.67
3524 5645 1.331447 GCGAGCATGCATACATTGTCA 59.669 47.619 21.98 0.00 32.87 3.58
3525 5646 1.600957 AGCGAGCATGCATACATTGTC 59.399 47.619 21.98 4.78 37.31 3.18
3526 5647 1.600957 GAGCGAGCATGCATACATTGT 59.399 47.619 21.98 0.00 37.31 2.71
3527 5648 1.871676 AGAGCGAGCATGCATACATTG 59.128 47.619 21.98 3.43 37.31 2.82
3528 5649 1.871676 CAGAGCGAGCATGCATACATT 59.128 47.619 21.98 0.00 37.31 2.71
3529 5650 1.509703 CAGAGCGAGCATGCATACAT 58.490 50.000 21.98 0.00 37.31 2.29
3530 5651 1.156034 GCAGAGCGAGCATGCATACA 61.156 55.000 21.98 0.00 39.75 2.29
3531 5652 0.879400 AGCAGAGCGAGCATGCATAC 60.879 55.000 21.98 8.15 42.45 2.39
3532 5653 0.675633 TAGCAGAGCGAGCATGCATA 59.324 50.000 21.98 11.52 42.45 3.14
3533 5654 0.600518 CTAGCAGAGCGAGCATGCAT 60.601 55.000 21.98 4.75 42.45 3.96
3534 5655 1.227176 CTAGCAGAGCGAGCATGCA 60.227 57.895 21.98 0.00 42.45 3.96
3535 5656 0.809241 AACTAGCAGAGCGAGCATGC 60.809 55.000 10.51 10.51 40.29 4.06
3536 5657 0.928922 CAACTAGCAGAGCGAGCATG 59.071 55.000 0.00 0.00 34.73 4.06
3537 5658 0.809241 GCAACTAGCAGAGCGAGCAT 60.809 55.000 0.00 0.00 44.79 3.79
3538 5659 1.446792 GCAACTAGCAGAGCGAGCA 60.447 57.895 0.00 0.00 44.79 4.26
3539 5660 3.393509 GCAACTAGCAGAGCGAGC 58.606 61.111 0.00 0.00 44.79 5.03
3575 5696 1.962144 CAGCAAAGGAAGCCAGTGG 59.038 57.895 4.20 4.20 0.00 4.00
3576 5697 1.288127 GCAGCAAAGGAAGCCAGTG 59.712 57.895 0.00 0.00 0.00 3.66
3577 5698 1.905354 GGCAGCAAAGGAAGCCAGT 60.905 57.895 0.00 0.00 46.26 4.00
3578 5699 2.968206 GGCAGCAAAGGAAGCCAG 59.032 61.111 0.00 0.00 46.26 4.85
3581 5702 0.319297 CAAGTGGCAGCAAAGGAAGC 60.319 55.000 0.00 0.00 0.00 3.86
3582 5703 0.316204 CCAAGTGGCAGCAAAGGAAG 59.684 55.000 0.00 0.00 0.00 3.46
3583 5704 2.428834 CCAAGTGGCAGCAAAGGAA 58.571 52.632 0.00 0.00 0.00 3.36
3584 5705 4.179361 CCAAGTGGCAGCAAAGGA 57.821 55.556 0.00 0.00 0.00 3.36
3604 5725 4.452733 CACCGAGGAGGGGTTCGC 62.453 72.222 0.00 0.00 46.96 4.70
3627 5748 4.372999 AGCAAGGGCAAGAGGGGC 62.373 66.667 0.00 0.00 44.61 5.80
3628 5749 2.362120 CAGCAAGGGCAAGAGGGG 60.362 66.667 0.00 0.00 44.61 4.79
3629 5750 1.676967 GTCAGCAAGGGCAAGAGGG 60.677 63.158 0.00 0.00 44.61 4.30
3630 5751 0.538057 TTGTCAGCAAGGGCAAGAGG 60.538 55.000 0.00 0.00 44.61 3.69
3631 5752 1.201647 CATTGTCAGCAAGGGCAAGAG 59.798 52.381 0.00 0.00 44.61 2.85
3632 5753 1.202915 TCATTGTCAGCAAGGGCAAGA 60.203 47.619 0.00 0.00 44.61 3.02
3633 5754 1.201647 CTCATTGTCAGCAAGGGCAAG 59.798 52.381 0.00 0.00 44.61 4.01
3634 5755 1.250328 CTCATTGTCAGCAAGGGCAA 58.750 50.000 0.00 0.00 44.61 4.52
3635 5756 0.609957 CCTCATTGTCAGCAAGGGCA 60.610 55.000 0.00 0.00 44.61 5.36
3636 5757 1.318158 CCCTCATTGTCAGCAAGGGC 61.318 60.000 3.35 0.00 38.10 5.19
3637 5758 1.318158 GCCCTCATTGTCAGCAAGGG 61.318 60.000 9.94 9.94 39.37 3.95
3638 5759 1.318158 GGCCCTCATTGTCAGCAAGG 61.318 60.000 0.00 0.00 38.10 3.61
3639 5760 1.651240 CGGCCCTCATTGTCAGCAAG 61.651 60.000 0.00 0.00 38.10 4.01
3640 5761 1.675310 CGGCCCTCATTGTCAGCAA 60.675 57.895 0.00 0.00 39.16 3.91
3641 5762 2.046023 CGGCCCTCATTGTCAGCA 60.046 61.111 0.00 0.00 0.00 4.41
3642 5763 3.512516 GCGGCCCTCATTGTCAGC 61.513 66.667 0.00 0.00 0.00 4.26
3643 5764 3.197790 CGCGGCCCTCATTGTCAG 61.198 66.667 0.00 0.00 0.00 3.51
3644 5765 4.776322 CCGCGGCCCTCATTGTCA 62.776 66.667 14.67 0.00 0.00 3.58
3662 5783 4.662961 TGGCCGAGTCAGTGCGTG 62.663 66.667 0.00 0.00 0.00 5.34
3663 5784 4.664677 GTGGCCGAGTCAGTGCGT 62.665 66.667 0.00 0.00 0.00 5.24
3664 5785 4.662961 TGTGGCCGAGTCAGTGCG 62.663 66.667 0.00 0.00 0.00 5.34
3665 5786 3.044305 GTGTGGCCGAGTCAGTGC 61.044 66.667 0.00 0.00 0.00 4.40
3666 5787 2.357517 GGTGTGGCCGAGTCAGTG 60.358 66.667 0.00 0.00 0.00 3.66
3667 5788 1.768684 ATTGGTGTGGCCGAGTCAGT 61.769 55.000 0.00 0.00 41.21 3.41
3668 5789 1.003355 ATTGGTGTGGCCGAGTCAG 60.003 57.895 0.00 0.00 41.21 3.51
3669 5790 1.003839 GATTGGTGTGGCCGAGTCA 60.004 57.895 0.00 0.00 41.21 3.41
3670 5791 0.321653 AAGATTGGTGTGGCCGAGTC 60.322 55.000 0.00 0.00 41.21 3.36
3671 5792 0.110486 AAAGATTGGTGTGGCCGAGT 59.890 50.000 0.00 0.00 41.21 4.18
3672 5793 0.523072 CAAAGATTGGTGTGGCCGAG 59.477 55.000 0.00 0.00 41.21 4.63
3673 5794 1.523154 GCAAAGATTGGTGTGGCCGA 61.523 55.000 0.00 0.00 41.21 5.54
3674 5795 1.080569 GCAAAGATTGGTGTGGCCG 60.081 57.895 0.00 0.00 41.21 6.13
3675 5796 0.392336 TTGCAAAGATTGGTGTGGCC 59.608 50.000 0.00 0.00 37.90 5.36
3676 5797 3.984838 TTGCAAAGATTGGTGTGGC 57.015 47.368 0.00 0.00 0.00 5.01
3691 5812 0.040958 CACCTCAACGAGCAACTTGC 60.041 55.000 5.55 5.55 45.46 4.01
3692 5813 0.588252 CCACCTCAACGAGCAACTTG 59.412 55.000 0.00 0.00 0.00 3.16
3693 5814 1.166531 GCCACCTCAACGAGCAACTT 61.167 55.000 0.00 0.00 0.00 2.66
3694 5815 1.598130 GCCACCTCAACGAGCAACT 60.598 57.895 0.00 0.00 0.00 3.16
3695 5816 2.617274 GGCCACCTCAACGAGCAAC 61.617 63.158 0.00 0.00 0.00 4.17
3696 5817 2.281484 GGCCACCTCAACGAGCAA 60.281 61.111 0.00 0.00 0.00 3.91
3697 5818 4.329545 GGGCCACCTCAACGAGCA 62.330 66.667 4.39 0.00 0.00 4.26
3699 5820 4.760047 CGGGGCCACCTCAACGAG 62.760 72.222 4.39 0.00 36.97 4.18
3717 5838 3.490759 AGAGACATTTGCGCGGCG 61.491 61.111 19.62 19.62 0.00 6.46
3718 5839 2.099062 CAGAGACATTTGCGCGGC 59.901 61.111 8.83 0.00 0.00 6.53
3719 5840 2.099062 GCAGAGACATTTGCGCGG 59.901 61.111 8.83 0.00 0.00 6.46
3723 5844 1.503542 CCACCGCAGAGACATTTGC 59.496 57.895 0.00 0.00 36.97 3.68
3724 5845 1.503542 GCCACCGCAGAGACATTTG 59.496 57.895 0.00 0.00 34.03 2.32
3725 5846 1.675641 GGCCACCGCAGAGACATTT 60.676 57.895 0.00 0.00 36.38 2.32
3726 5847 2.045926 GGCCACCGCAGAGACATT 60.046 61.111 0.00 0.00 36.38 2.71
3727 5848 4.101448 GGGCCACCGCAGAGACAT 62.101 66.667 4.39 0.00 36.38 3.06
3729 5850 4.767255 CAGGGCCACCGCAGAGAC 62.767 72.222 6.18 0.00 43.47 3.36
3742 5863 2.770048 CCCTAGACCAGCCCAGGG 60.770 72.222 0.00 0.00 41.83 4.45
3743 5864 3.483869 GCCCTAGACCAGCCCAGG 61.484 72.222 0.00 0.00 0.00 4.45
3744 5865 3.483869 GGCCCTAGACCAGCCCAG 61.484 72.222 0.00 0.00 41.00 4.45
3747 5868 3.483869 CTGGGCCCTAGACCAGCC 61.484 72.222 25.70 9.10 46.78 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.