Multiple sequence alignment - TraesCS7D01G480900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G480900 chr7D 100.000 5522 0 0 1 5522 591451209 591445688 0.000000e+00 10198.0
1 TraesCS7D01G480900 chr7B 89.995 2029 123 38 2885 4882 672388001 672389980 0.000000e+00 2549.0
2 TraesCS7D01G480900 chr7B 84.360 1413 101 46 36 1414 672385218 672386544 0.000000e+00 1275.0
3 TraesCS7D01G480900 chr7B 91.141 587 40 6 1963 2545 672386909 672387487 0.000000e+00 785.0
4 TraesCS7D01G480900 chr7B 87.421 318 21 7 2564 2879 672387517 672387817 1.140000e-91 348.0
5 TraesCS7D01G480900 chr7A 94.316 1214 56 6 3669 4882 681993294 681992094 0.000000e+00 1847.0
6 TraesCS7D01G480900 chr7A 86.551 1435 99 55 37 1427 681997523 681996139 0.000000e+00 1495.0
7 TraesCS7D01G480900 chr7A 90.713 883 68 7 1657 2534 681995832 681994959 0.000000e+00 1164.0
8 TraesCS7D01G480900 chr7A 91.589 749 46 11 2885 3630 681994029 681993295 0.000000e+00 1018.0
9 TraesCS7D01G480900 chr7A 91.973 299 20 2 5041 5336 681992099 681991802 3.080000e-112 416.0
10 TraesCS7D01G480900 chr7A 90.909 297 19 4 2583 2879 681994501 681994213 5.190000e-105 392.0
11 TraesCS7D01G480900 chr7A 86.463 229 14 8 5309 5522 681991712 681991486 9.250000e-58 235.0
12 TraesCS7D01G480900 chr7A 91.329 173 9 2 4874 5046 430764116 430764282 1.200000e-56 231.0
13 TraesCS7D01G480900 chr7A 89.720 107 9 2 1546 1650 681996094 681995988 9.650000e-28 135.0
14 TraesCS7D01G480900 chr7A 86.364 110 10 5 306 412 40351435 40351542 1.260000e-21 115.0
15 TraesCS7D01G480900 chr4B 89.101 367 37 3 1701 2066 132877004 132877368 2.350000e-123 453.0
16 TraesCS7D01G480900 chr4B 89.787 235 19 1 2088 2322 132877357 132877586 4.180000e-76 296.0
17 TraesCS7D01G480900 chr4B 80.861 418 42 15 1270 1650 132875216 132875632 1.500000e-75 294.0
18 TraesCS7D01G480900 chr6B 80.096 417 37 17 1270 1650 34440818 34440412 9.120000e-68 268.0
19 TraesCS7D01G480900 chr6B 84.293 191 26 4 19 209 519846224 519846038 3.400000e-42 183.0
20 TraesCS7D01G480900 chr6B 94.118 102 6 0 2221 2322 34440296 34440195 7.410000e-34 156.0
21 TraesCS7D01G480900 chr5B 87.831 189 18 4 4869 5053 550433219 550433406 3.350000e-52 217.0
22 TraesCS7D01G480900 chr2B 84.456 193 21 5 20 211 742175117 742175301 1.220000e-41 182.0
23 TraesCS7D01G480900 chr2B 82.648 219 23 9 1 211 139806509 139806298 4.390000e-41 180.0
24 TraesCS7D01G480900 chr2B 84.277 159 16 8 54 206 100345451 100345606 4.460000e-31 147.0
25 TraesCS7D01G480900 chr2B 80.460 174 23 4 4880 5053 638148118 638148280 7.510000e-24 122.0
26 TraesCS7D01G480900 chr6D 83.010 206 22 11 6 209 344304534 344304340 2.040000e-39 174.0
27 TraesCS7D01G480900 chr6D 78.707 263 35 12 270 516 42152470 42152727 7.410000e-34 156.0
28 TraesCS7D01G480900 chr6A 83.240 179 25 5 31 209 484851896 484851723 5.730000e-35 159.0
29 TraesCS7D01G480900 chr4A 80.189 212 22 13 278 470 646903189 646903399 2.070000e-29 141.0
30 TraesCS7D01G480900 chr4A 83.871 93 10 4 306 395 647038977 647039067 3.540000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G480900 chr7D 591445688 591451209 5521 True 10198.000000 10198 100.00000 1 5522 1 chr7D.!!$R1 5521
1 TraesCS7D01G480900 chr7B 672385218 672389980 4762 False 1239.250000 2549 88.22925 36 4882 4 chr7B.!!$F1 4846
2 TraesCS7D01G480900 chr7A 681991486 681997523 6037 True 837.750000 1847 90.27925 37 5522 8 chr7A.!!$R1 5485
3 TraesCS7D01G480900 chr4B 132875216 132877586 2370 False 347.666667 453 86.58300 1270 2322 3 chr4B.!!$F1 1052
4 TraesCS7D01G480900 chr6B 34440195 34440818 623 True 212.000000 268 87.10700 1270 2322 2 chr6B.!!$R2 1052

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
627 651 0.096976 CAATTGCCATCGTCGGTGTC 59.903 55.0 4.52 0.0 0.00 3.67 F
1820 3275 0.176910 TAGGCGATTGTGATGGCGAA 59.823 50.0 0.00 0.0 37.82 4.70 F
1934 3389 0.391130 GACGGTACAGAGCATGCCAA 60.391 55.0 15.66 0.0 0.00 4.52 F
3316 5379 0.466189 ATAAACCCAGGCATCAGGCG 60.466 55.0 0.00 0.0 46.16 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2553 4012 0.035458 GTATGATTCTGCCGGGGAGG 59.965 60.0 16.05 0.00 44.97 4.30 R
2991 5046 0.250640 CTGACTGCCTCAGTGCCTTT 60.251 55.0 3.98 0.00 45.44 3.11 R
3366 5429 0.324943 CTGGTTGGGGAGTTGATCGT 59.675 55.0 0.00 0.00 0.00 3.73 R
4723 6796 0.036010 ATCTGGGGTTTGTGCTCGAG 60.036 55.0 8.45 8.45 0.00 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 6.985653 TTTGGAGGTAACATTTGGAATTCA 57.014 33.333 7.93 0.00 41.41 2.57
50 51 6.208599 TGGAGGTAACATTTGGAATTCAACTC 59.791 38.462 7.93 1.38 41.41 3.01
52 53 4.857037 GGTAACATTTGGAATTCAACTCGC 59.143 41.667 7.93 0.00 34.67 5.03
57 58 6.048509 ACATTTGGAATTCAACTCGCTTTTT 58.951 32.000 7.93 0.00 34.67 1.94
58 59 7.206687 ACATTTGGAATTCAACTCGCTTTTTA 58.793 30.769 7.93 0.00 34.67 1.52
63 64 7.601856 TGGAATTCAACTCGCTTTTTATTCAT 58.398 30.769 7.93 0.00 0.00 2.57
102 103 5.693961 AGTTTTTCCCCTGAAAATTTGCAT 58.306 33.333 0.00 0.00 46.76 3.96
105 106 3.681593 TCCCCTGAAAATTTGCATGTG 57.318 42.857 0.00 0.00 0.00 3.21
106 107 2.971330 TCCCCTGAAAATTTGCATGTGT 59.029 40.909 0.00 0.00 0.00 3.72
130 131 4.319139 TTTGGGTGTGACAATGAACATG 57.681 40.909 0.00 0.00 0.00 3.21
174 181 5.914085 TTGTAAAATCCATTTTTGGCACG 57.086 34.783 2.68 0.00 40.24 5.34
176 183 2.540265 AAATCCATTTTTGGCACGCA 57.460 40.000 0.00 0.00 0.00 5.24
211 218 5.341169 TCCCTAAGAGCCAAAATGGATTTT 58.659 37.500 0.00 0.00 35.51 1.82
212 219 5.422012 TCCCTAAGAGCCAAAATGGATTTTC 59.578 40.000 0.00 0.00 35.51 2.29
216 223 3.193479 AGAGCCAAAATGGATTTTCGTCC 59.807 43.478 0.00 0.00 35.51 4.79
255 262 0.384230 CAAAAGCACGCACAGGTACG 60.384 55.000 0.00 0.00 0.00 3.67
277 287 5.163353 ACGGAACTAGTAGTAGTACTCCCTC 60.163 48.000 13.60 8.46 38.66 4.30
278 288 5.620206 GGAACTAGTAGTAGTACTCCCTCC 58.380 50.000 13.60 13.01 38.66 4.30
284 294 4.704057 AGTAGTAGTACTCCCTCCGTTTTG 59.296 45.833 5.96 0.00 34.00 2.44
291 301 4.360951 ACTCCCTCCGTTTTGATTTACA 57.639 40.909 0.00 0.00 0.00 2.41
312 325 2.963782 ACCCCGTATTAGCTCCTAAGTG 59.036 50.000 0.00 0.00 29.02 3.16
317 330 5.394883 CCCGTATTAGCTCCTAAGTGAAACA 60.395 44.000 0.00 0.00 41.43 2.83
350 363 9.313118 AGTTTGACCAAGTTTATCAAAACAATC 57.687 29.630 11.21 2.31 46.18 2.67
351 364 9.313118 GTTTGACCAAGTTTATCAAAACAATCT 57.687 29.630 11.21 0.00 46.18 2.40
430 452 8.274322 TCTAATGGATTGACTTGTGGATGTTAT 58.726 33.333 0.00 0.00 0.00 1.89
431 453 9.559732 CTAATGGATTGACTTGTGGATGTTATA 57.440 33.333 0.00 0.00 0.00 0.98
483 507 4.799564 AAGTTTGACCTGAAACAAAGCA 57.200 36.364 0.00 0.00 38.14 3.91
545 569 1.753848 CAATGGGCGGCCAAGATCA 60.754 57.895 36.08 10.90 0.00 2.92
580 604 0.606401 CGTGCCAACCTCAGAACCAT 60.606 55.000 0.00 0.00 0.00 3.55
585 609 1.171308 CAACCTCAGAACCATGCCAG 58.829 55.000 0.00 0.00 0.00 4.85
608 632 1.316706 CCCGTCCTCACTGTCCTCTC 61.317 65.000 0.00 0.00 0.00 3.20
610 634 1.248486 CGTCCTCACTGTCCTCTCAA 58.752 55.000 0.00 0.00 0.00 3.02
612 636 2.232452 CGTCCTCACTGTCCTCTCAATT 59.768 50.000 0.00 0.00 0.00 2.32
614 638 2.027745 TCCTCACTGTCCTCTCAATTGC 60.028 50.000 0.00 0.00 0.00 3.56
615 639 2.354259 CTCACTGTCCTCTCAATTGCC 58.646 52.381 0.00 0.00 0.00 4.52
616 640 1.699083 TCACTGTCCTCTCAATTGCCA 59.301 47.619 0.00 0.00 0.00 4.92
627 651 0.096976 CAATTGCCATCGTCGGTGTC 59.903 55.000 4.52 0.00 0.00 3.67
681 705 4.039366 AGAAGACGCTTACAAGAGGAAGTT 59.961 41.667 0.00 0.00 0.00 2.66
702 727 1.194322 GCGGCGACAAATGCAATTTTT 59.806 42.857 12.98 0.00 46.10 1.94
728 753 3.077484 ACCACTGACCCATCATCTTTG 57.923 47.619 0.00 0.00 33.22 2.77
729 754 2.291153 ACCACTGACCCATCATCTTTGG 60.291 50.000 0.00 0.00 33.22 3.28
730 755 2.291153 CCACTGACCCATCATCTTTGGT 60.291 50.000 0.00 0.00 33.22 3.67
731 756 3.012518 CACTGACCCATCATCTTTGGTC 58.987 50.000 0.00 0.00 45.99 4.02
777 806 3.370061 CGATAGCTATACATGTCGGACGA 59.630 47.826 6.13 0.00 0.00 4.20
779 808 5.616204 CGATAGCTATACATGTCGGACGAAA 60.616 44.000 6.13 0.00 0.00 3.46
780 809 4.380841 AGCTATACATGTCGGACGAAAA 57.619 40.909 0.00 0.00 0.00 2.29
816 851 2.752903 ACCATTGAAGTCGTATTTGGCC 59.247 45.455 0.00 0.00 0.00 5.36
834 869 1.135402 GCCGGCTTTACACAATCCAAG 60.135 52.381 22.15 0.00 0.00 3.61
852 887 1.449778 GCAAGAAGGCGTACTCCCC 60.450 63.158 0.00 0.00 0.00 4.81
877 912 1.731613 CGTAACCGCGAGCTGAACA 60.732 57.895 8.23 0.00 0.00 3.18
878 913 1.779683 GTAACCGCGAGCTGAACAC 59.220 57.895 8.23 0.00 0.00 3.32
879 914 0.942410 GTAACCGCGAGCTGAACACA 60.942 55.000 8.23 0.00 0.00 3.72
880 915 0.942410 TAACCGCGAGCTGAACACAC 60.942 55.000 8.23 0.00 0.00 3.82
881 916 3.414700 CCGCGAGCTGAACACACC 61.415 66.667 8.23 0.00 0.00 4.16
882 917 3.767230 CGCGAGCTGAACACACCG 61.767 66.667 0.00 0.00 0.00 4.94
883 918 3.414700 GCGAGCTGAACACACCGG 61.415 66.667 0.00 0.00 0.00 5.28
884 919 3.414700 CGAGCTGAACACACCGGC 61.415 66.667 0.00 0.00 36.21 6.13
886 921 4.235762 AGCTGAACACACCGGCGT 62.236 61.111 6.01 0.00 40.66 5.68
887 922 2.356553 GCTGAACACACCGGCGTA 60.357 61.111 6.01 0.00 0.00 4.42
888 923 2.664436 GCTGAACACACCGGCGTAC 61.664 63.158 6.01 0.00 0.00 3.67
957 998 2.573083 AAACGAACCCCGCCGTCTA 61.573 57.895 0.00 0.00 43.32 2.59
959 1000 3.446570 CGAACCCCGCCGTCTACT 61.447 66.667 0.00 0.00 0.00 2.57
960 1001 2.493501 GAACCCCGCCGTCTACTC 59.506 66.667 0.00 0.00 0.00 2.59
961 1002 2.283388 AACCCCGCCGTCTACTCA 60.283 61.111 0.00 0.00 0.00 3.41
963 1004 3.834799 CCCCGCCGTCTACTCACC 61.835 72.222 0.00 0.00 0.00 4.02
964 1005 4.189188 CCCGCCGTCTACTCACCG 62.189 72.222 0.00 0.00 0.00 4.94
1177 1234 1.498264 GTAAGTCCCCTCTCCCTTCC 58.502 60.000 0.00 0.00 0.00 3.46
1266 1324 2.260869 GGATGTGGTTGCTGCGTGT 61.261 57.895 0.00 0.00 0.00 4.49
1282 1340 1.132453 CGTGTTCTGGTCTCGCTGATA 59.868 52.381 0.00 0.00 0.00 2.15
1287 1345 1.604278 TCTGGTCTCGCTGATATGACG 59.396 52.381 0.00 0.00 0.00 4.35
1294 1352 1.067416 GCTGATATGACGGTGGCGA 59.933 57.895 0.00 0.00 0.00 5.54
1303 1367 1.940883 GACGGTGGCGATGTAGGACA 61.941 60.000 0.00 0.00 0.00 4.02
1354 1418 3.016971 CCCCATGGCCTGGTCAGA 61.017 66.667 7.25 0.00 44.30 3.27
1401 1467 7.984050 CAGAGATATTAGTTTCTCCTTTGCAGA 59.016 37.037 2.73 0.00 39.36 4.26
1428 1496 9.632638 ATTTCTGTAGTATGGTGATTTATTGCT 57.367 29.630 0.00 0.00 0.00 3.91
1472 1559 2.356135 GAGCGCAGATCCAAACCTTTA 58.644 47.619 11.47 0.00 36.66 1.85
1474 1561 2.945668 AGCGCAGATCCAAACCTTTATC 59.054 45.455 11.47 0.00 0.00 1.75
1500 1591 4.859304 TTGAAACTTACTAGAGCACGGA 57.141 40.909 0.00 0.00 0.00 4.69
1501 1592 4.859304 TGAAACTTACTAGAGCACGGAA 57.141 40.909 0.00 0.00 0.00 4.30
1544 1635 5.872070 TGAACTTGGTCAAAATTGTTTGGAC 59.128 36.000 2.09 2.09 43.70 4.02
1550 1641 4.202070 GGTCAAAATTGTTTGGACGAGGAA 60.202 41.667 0.00 0.00 43.70 3.36
1551 1642 4.738252 GTCAAAATTGTTTGGACGAGGAAC 59.262 41.667 0.00 0.00 43.70 3.62
1588 1693 5.157770 TCCTTTCCAGGATCCTACTGTAT 57.842 43.478 15.67 0.00 45.20 2.29
1590 1695 6.689561 TCCTTTCCAGGATCCTACTGTATTA 58.310 40.000 15.67 0.00 45.20 0.98
1616 1721 6.978080 TGGTGATTTCTTGCTTTCTTTTGTAC 59.022 34.615 0.00 0.00 0.00 2.90
1627 1732 7.703328 TGCTTTCTTTTGTACTAAAACCAGAG 58.297 34.615 4.11 0.81 0.00 3.35
1647 1752 2.070783 GCCGAAATCGTTTGGACTGTA 58.929 47.619 1.79 0.00 40.45 2.74
1648 1753 2.093783 GCCGAAATCGTTTGGACTGTAG 59.906 50.000 1.79 0.00 40.45 2.74
1649 1754 3.581755 CCGAAATCGTTTGGACTGTAGA 58.418 45.455 1.79 0.00 40.45 2.59
1650 1755 3.367025 CCGAAATCGTTTGGACTGTAGAC 59.633 47.826 1.79 0.00 40.45 2.59
1652 1757 4.625742 CGAAATCGTTTGGACTGTAGACAT 59.374 41.667 0.00 0.00 34.11 3.06
1653 1758 5.120208 CGAAATCGTTTGGACTGTAGACATT 59.880 40.000 0.00 0.00 34.11 2.71
1655 1912 4.866508 TCGTTTGGACTGTAGACATTCT 57.133 40.909 0.75 0.00 0.00 2.40
1663 1920 3.929610 GACTGTAGACATTCTTGCTCCAC 59.070 47.826 0.00 0.00 0.00 4.02
1679 1936 3.871594 GCTCCACTACACCATTACATCAC 59.128 47.826 0.00 0.00 0.00 3.06
1709 3164 4.183101 CAGAAACAGTTGTGGCAAACATT 58.817 39.130 12.71 6.06 38.99 2.71
1710 3165 4.033129 CAGAAACAGTTGTGGCAAACATTG 59.967 41.667 12.71 7.39 38.99 2.82
1711 3166 2.600470 ACAGTTGTGGCAAACATTGG 57.400 45.000 12.71 4.70 38.99 3.16
1712 3167 1.830477 ACAGTTGTGGCAAACATTGGT 59.170 42.857 12.71 5.13 38.99 3.67
1713 3168 2.159114 ACAGTTGTGGCAAACATTGGTC 60.159 45.455 12.71 0.00 38.99 4.02
1714 3169 2.101249 CAGTTGTGGCAAACATTGGTCT 59.899 45.455 12.71 0.00 38.99 3.85
1716 3171 1.327303 TGTGGCAAACATTGGTCTCC 58.673 50.000 0.00 0.00 32.36 3.71
1717 3172 1.133513 TGTGGCAAACATTGGTCTCCT 60.134 47.619 0.00 0.00 32.36 3.69
1719 3174 1.177401 GGCAAACATTGGTCTCCTCC 58.823 55.000 0.00 0.00 0.00 4.30
1754 3209 0.683973 CCAGATCATAAGCGCCTCCT 59.316 55.000 2.29 0.00 0.00 3.69
1782 3237 1.721389 CAGTGGAGATGTTGACGAACG 59.279 52.381 0.00 0.00 34.49 3.95
1790 3245 1.155424 TGTTGACGAACGCCACCTTC 61.155 55.000 0.00 0.00 34.49 3.46
1791 3246 1.144276 TTGACGAACGCCACCTTCA 59.856 52.632 0.00 0.00 0.00 3.02
1811 3266 3.643320 TCATCCTCTTCATAGGCGATTGT 59.357 43.478 0.00 0.00 36.51 2.71
1820 3275 0.176910 TAGGCGATTGTGATGGCGAA 59.823 50.000 0.00 0.00 37.82 4.70
1836 3291 3.126831 GGCGAATTCACTATCTCCAGTG 58.873 50.000 6.22 0.00 46.04 3.66
1900 3355 2.363147 GGAGTGAGGCGGAGAGGT 60.363 66.667 0.00 0.00 0.00 3.85
1901 3356 2.716017 GGAGTGAGGCGGAGAGGTG 61.716 68.421 0.00 0.00 0.00 4.00
1903 3358 2.997897 GTGAGGCGGAGAGGTGGT 60.998 66.667 0.00 0.00 0.00 4.16
1904 3359 2.997315 TGAGGCGGAGAGGTGGTG 60.997 66.667 0.00 0.00 0.00 4.17
1917 3372 1.598130 GTGGTGTCAGTGCCAGGAC 60.598 63.158 0.00 0.00 35.14 3.85
1921 3376 1.532078 TGTCAGTGCCAGGACGGTA 60.532 57.895 0.00 0.00 36.83 4.02
1929 3384 1.961180 GCCAGGACGGTACAGAGCAT 61.961 60.000 0.00 0.00 36.97 3.79
1934 3389 0.391130 GACGGTACAGAGCATGCCAA 60.391 55.000 15.66 0.00 0.00 4.52
1959 3414 1.168714 GTTGGAGGATGACAGGTTGC 58.831 55.000 0.00 0.00 0.00 4.17
1988 3443 3.324268 CACCTCCAGCTATCAGATCACAT 59.676 47.826 0.00 0.00 0.00 3.21
1994 3449 4.558178 CAGCTATCAGATCACATCCTGTC 58.442 47.826 0.00 0.00 0.00 3.51
2049 3504 5.532664 TGATTGGAGATCATCTGTGAGAG 57.467 43.478 0.00 0.00 37.87 3.20
2092 3547 6.096001 GGTGATCCTCTTTGAGCATAATTTGT 59.904 38.462 0.00 0.00 32.61 2.83
2097 3552 6.372659 TCCTCTTTGAGCATAATTTGTCACTC 59.627 38.462 0.00 0.00 0.00 3.51
2162 3617 7.172868 TCAGACCATAATGCATTGTTCAAAT 57.827 32.000 22.27 3.17 0.00 2.32
2163 3618 7.259882 TCAGACCATAATGCATTGTTCAAATC 58.740 34.615 22.27 9.79 0.00 2.17
2164 3619 7.036829 CAGACCATAATGCATTGTTCAAATCA 58.963 34.615 22.27 0.00 0.00 2.57
2165 3620 7.546316 CAGACCATAATGCATTGTTCAAATCAA 59.454 33.333 22.27 0.00 0.00 2.57
2166 3621 8.095792 AGACCATAATGCATTGTTCAAATCAAA 58.904 29.630 22.27 0.00 0.00 2.69
2179 3634 8.961294 TGTTCAAATCAAAATGTGAGGATTTT 57.039 26.923 0.00 0.00 40.43 1.82
2301 3756 2.239400 CCTGGAGGTTTCCCAAAGAAC 58.761 52.381 0.00 0.00 43.33 3.01
2342 3798 1.039068 CTTTGGCCACCACACAATCA 58.961 50.000 3.88 0.00 30.78 2.57
2412 3868 8.094548 ACAATCTAAAGGCTTGTTTATTTTCCC 58.905 33.333 0.00 0.00 29.06 3.97
2415 3871 4.890158 AAGGCTTGTTTATTTTCCCCTG 57.110 40.909 0.00 0.00 0.00 4.45
2442 3898 8.579850 TTCAAGATTGTGCCTAGTCATTAATT 57.420 30.769 0.00 0.00 0.00 1.40
2445 3901 9.722056 CAAGATTGTGCCTAGTCATTAATTTAC 57.278 33.333 0.00 0.00 0.00 2.01
2470 3926 2.564947 GTGAGAGGAGCCAGAGAAAGAA 59.435 50.000 0.00 0.00 0.00 2.52
2515 3971 3.955471 TGGAGCAAACAGAGGGAATAAG 58.045 45.455 0.00 0.00 0.00 1.73
2545 4004 5.049129 GCTGAACACCTCTATTAATGATGCC 60.049 44.000 0.00 0.00 0.00 4.40
2546 4005 5.376625 TGAACACCTCTATTAATGATGCCC 58.623 41.667 0.00 0.00 0.00 5.36
2547 4006 4.373156 ACACCTCTATTAATGATGCCCC 57.627 45.455 0.00 0.00 0.00 5.80
2548 4007 3.074538 ACACCTCTATTAATGATGCCCCC 59.925 47.826 0.00 0.00 0.00 5.40
2593 4458 5.030874 ACTGCCGAAAAAGAGAATTTACG 57.969 39.130 0.00 0.00 0.00 3.18
2621 4486 2.229792 TGAGTGACAAGCCCATGAAAC 58.770 47.619 0.00 0.00 0.00 2.78
2665 4530 5.587844 TGGCTCTATCTGCTTCAAAATTCTC 59.412 40.000 0.00 0.00 0.00 2.87
2733 4598 4.209703 CAGCTATTTGTTGTTGCCTTGTTG 59.790 41.667 0.00 0.00 0.00 3.33
2751 4616 3.452990 TGTTGGTACTGAACTGAACAGGA 59.547 43.478 6.76 0.00 39.38 3.86
2779 4646 2.032965 TCTGGCCTTACCTGGTGTTA 57.967 50.000 10.23 0.00 40.22 2.41
2793 4662 6.053650 ACCTGGTGTTAGTGTTCTAAGTTTC 58.946 40.000 0.00 0.00 36.90 2.78
2874 4743 4.578928 ACACTGCTTGTTTTATCCGAAACT 59.421 37.500 2.68 0.00 39.62 2.66
2879 4748 6.205784 TGCTTGTTTTATCCGAAACTGAAAG 58.794 36.000 2.68 0.28 39.62 2.62
2912 4959 9.233232 CTAAACTTAAATGGTTGTGTGAAGTTC 57.767 33.333 0.00 0.00 35.26 3.01
2942 4989 1.209128 CGCGAACACTTGTGAAGAGT 58.791 50.000 0.00 0.00 33.62 3.24
2961 5008 2.595463 CATGGCTATGCGGGGTGG 60.595 66.667 0.00 0.00 0.00 4.61
2962 5009 4.586235 ATGGCTATGCGGGGTGGC 62.586 66.667 0.00 0.00 0.00 5.01
3002 5057 6.506500 AATATGAAACTGAAAGGCACTGAG 57.493 37.500 0.00 0.00 40.86 3.35
3004 5059 1.268079 GAAACTGAAAGGCACTGAGGC 59.732 52.381 0.00 0.00 40.86 4.70
3051 5108 3.323751 TGATGATGATGCCCATAGTCG 57.676 47.619 0.00 0.00 35.17 4.18
3126 5183 6.135290 TGGCGTAAATGAGTACGTATTACT 57.865 37.500 0.00 0.00 46.74 2.24
3146 5203 5.995565 ACTGTATTAGGTGTAAGTGCAGA 57.004 39.130 0.00 0.00 0.00 4.26
3189 5246 2.125753 CTGGCTGACTGGAGCGAC 60.126 66.667 0.00 0.00 40.13 5.19
3227 5284 3.005261 ACATCTCTATGACTCCACGCATC 59.995 47.826 0.00 0.00 36.54 3.91
3258 5315 5.452496 GCTAGCACCAGAGATTTATGACTCA 60.452 44.000 10.63 0.00 35.83 3.41
3259 5316 5.627182 AGCACCAGAGATTTATGACTCAT 57.373 39.130 0.00 0.00 35.83 2.90
3284 5344 4.788925 TCTTGTCTTTCCCCTCTCAAAA 57.211 40.909 0.00 0.00 0.00 2.44
3316 5379 0.466189 ATAAACCCAGGCATCAGGCG 60.466 55.000 0.00 0.00 46.16 5.52
3334 5397 2.514592 GCAGGCCAGCAGCGATTA 60.515 61.111 16.36 0.00 45.17 1.75
3392 5455 1.062488 ACTCCCCAACCAGCTGTTCT 61.062 55.000 13.81 0.00 34.00 3.01
3408 5471 4.158394 GCTGTTCTCCAATTTAGCCATTCA 59.842 41.667 0.00 0.00 0.00 2.57
3643 5706 5.574891 TTGTAACACAAAGCAGAACACAT 57.425 34.783 0.00 0.00 34.76 3.21
3807 5875 7.276658 GTGTGTGTTGTTTGATATTTGGTGAAA 59.723 33.333 0.00 0.00 0.00 2.69
3808 5876 7.819415 TGTGTGTTGTTTGATATTTGGTGAAAA 59.181 29.630 0.00 0.00 0.00 2.29
3809 5877 8.660373 GTGTGTTGTTTGATATTTGGTGAAAAA 58.340 29.630 0.00 0.00 0.00 1.94
3901 5969 4.349930 ACCCAACTACTGTCAACTTACCAT 59.650 41.667 0.00 0.00 0.00 3.55
3929 5997 4.209288 CAGTGTTTTCGTACTGTCTGAAGG 59.791 45.833 0.00 0.00 39.48 3.46
3964 6032 9.177304 GTTTAAGTACTCAATTTTTGCAGGTAC 57.823 33.333 0.00 0.00 34.43 3.34
4244 6312 9.709495 TTCAATGAAAAGATTTATTCTGGTTGG 57.291 29.630 0.00 0.00 33.93 3.77
4423 6491 4.061131 TCTTGTTCCATCCTGACTCCTA 57.939 45.455 0.00 0.00 0.00 2.94
4424 6492 3.769844 TCTTGTTCCATCCTGACTCCTAC 59.230 47.826 0.00 0.00 0.00 3.18
4455 6528 3.565307 TCATGGGGAAAATGCAGATACC 58.435 45.455 0.00 0.00 0.00 2.73
4497 6570 3.265791 CGAGCTGGCTAAACTTCTGAAT 58.734 45.455 0.00 0.00 0.00 2.57
4500 6573 5.525378 CGAGCTGGCTAAACTTCTGAATATT 59.475 40.000 0.00 0.00 0.00 1.28
4557 6630 5.795441 GCACAAATATCGTCCTTCTTGTTTC 59.205 40.000 0.00 0.00 0.00 2.78
4610 6683 4.338118 TGGATTATCATTTTCGCAGAACCC 59.662 41.667 0.00 0.00 45.90 4.11
4723 6796 5.220381 CCTTGCATACTGATTGATTGCATC 58.780 41.667 0.00 0.00 42.34 3.91
4726 6799 4.212636 TGCATACTGATTGATTGCATCTCG 59.787 41.667 0.00 0.00 38.32 4.04
4782 6855 5.521372 TCATATGCAGCGAATACAGATATGC 59.479 40.000 0.00 0.00 0.00 3.14
4795 6868 9.869844 GAATACAGATATGCTTCAATTGTACAC 57.130 33.333 5.13 0.00 0.00 2.90
4796 6869 8.962884 ATACAGATATGCTTCAATTGTACACA 57.037 30.769 5.13 0.80 0.00 3.72
4803 6891 6.884096 TGCTTCAATTGTACACAGTTTTTG 57.116 33.333 5.13 0.00 0.00 2.44
4813 6901 4.273005 ACACAGTTTTTGAAGTACGCAG 57.727 40.909 0.00 0.00 0.00 5.18
4864 6953 1.364626 GCTCAGCATCGTGACTTGGG 61.365 60.000 0.00 0.00 0.00 4.12
4876 6965 4.960469 TCGTGACTTGGGAGGTAAGAATAT 59.040 41.667 0.00 0.00 0.00 1.28
4877 6966 5.068723 TCGTGACTTGGGAGGTAAGAATATC 59.931 44.000 0.00 0.00 0.00 1.63
4878 6967 5.069251 CGTGACTTGGGAGGTAAGAATATCT 59.931 44.000 0.00 0.00 0.00 1.98
4879 6968 6.264744 CGTGACTTGGGAGGTAAGAATATCTA 59.735 42.308 0.00 0.00 0.00 1.98
4880 6969 7.201884 CGTGACTTGGGAGGTAAGAATATCTAA 60.202 40.741 0.00 0.00 0.00 2.10
4881 6970 8.145122 GTGACTTGGGAGGTAAGAATATCTAAG 58.855 40.741 0.00 0.00 0.00 2.18
4882 6971 7.290248 TGACTTGGGAGGTAAGAATATCTAAGG 59.710 40.741 0.00 0.00 0.00 2.69
4883 6972 6.043358 ACTTGGGAGGTAAGAATATCTAAGGC 59.957 42.308 0.00 0.00 0.00 4.35
4884 6973 4.844655 TGGGAGGTAAGAATATCTAAGGCC 59.155 45.833 0.00 0.00 0.00 5.19
4885 6974 4.225492 GGGAGGTAAGAATATCTAAGGCCC 59.775 50.000 0.00 0.00 0.00 5.80
4886 6975 4.225492 GGAGGTAAGAATATCTAAGGCCCC 59.775 50.000 0.00 0.00 0.00 5.80
4887 6976 3.838903 AGGTAAGAATATCTAAGGCCCCG 59.161 47.826 0.00 0.00 0.00 5.73
4888 6977 3.581770 GGTAAGAATATCTAAGGCCCCGT 59.418 47.826 0.00 0.00 0.00 5.28
4889 6978 4.041321 GGTAAGAATATCTAAGGCCCCGTT 59.959 45.833 0.00 0.00 0.00 4.44
4890 6979 4.790718 AAGAATATCTAAGGCCCCGTTT 57.209 40.909 0.00 0.00 0.00 3.60
4891 6980 4.086706 AGAATATCTAAGGCCCCGTTTG 57.913 45.455 0.00 0.00 0.00 2.93
4892 6981 2.951229 ATATCTAAGGCCCCGTTTGG 57.049 50.000 0.00 0.00 0.00 3.28
4893 6982 1.882308 TATCTAAGGCCCCGTTTGGA 58.118 50.000 0.00 0.00 37.49 3.53
4894 6983 1.222567 ATCTAAGGCCCCGTTTGGAT 58.777 50.000 0.00 0.00 37.49 3.41
4895 6984 0.996583 TCTAAGGCCCCGTTTGGATT 59.003 50.000 0.00 0.00 37.49 3.01
4896 6985 2.198336 TCTAAGGCCCCGTTTGGATTA 58.802 47.619 0.00 0.00 37.49 1.75
4897 6986 2.781174 TCTAAGGCCCCGTTTGGATTAT 59.219 45.455 0.00 0.00 37.49 1.28
4898 6987 2.067365 AAGGCCCCGTTTGGATTATC 57.933 50.000 0.00 0.00 37.49 1.75
4899 6988 0.179029 AGGCCCCGTTTGGATTATCG 60.179 55.000 0.00 0.00 37.49 2.92
4900 6989 0.464916 GGCCCCGTTTGGATTATCGT 60.465 55.000 0.00 0.00 37.49 3.73
4901 6990 1.385528 GCCCCGTTTGGATTATCGTT 58.614 50.000 0.00 0.00 37.49 3.85
4902 6991 1.746787 GCCCCGTTTGGATTATCGTTT 59.253 47.619 0.00 0.00 37.49 3.60
4903 6992 2.944349 GCCCCGTTTGGATTATCGTTTA 59.056 45.455 0.00 0.00 37.49 2.01
4904 6993 3.002965 GCCCCGTTTGGATTATCGTTTAG 59.997 47.826 0.00 0.00 37.49 1.85
4905 6994 3.002965 CCCCGTTTGGATTATCGTTTAGC 59.997 47.826 0.00 0.00 37.49 3.09
4906 6995 3.875134 CCCGTTTGGATTATCGTTTAGCT 59.125 43.478 0.00 0.00 37.49 3.32
4907 6996 4.025145 CCCGTTTGGATTATCGTTTAGCTC 60.025 45.833 0.00 0.00 37.49 4.09
4908 6997 4.025145 CCGTTTGGATTATCGTTTAGCTCC 60.025 45.833 0.00 0.00 37.49 4.70
4909 6998 4.809426 CGTTTGGATTATCGTTTAGCTCCT 59.191 41.667 0.00 0.00 0.00 3.69
4910 6999 5.981315 CGTTTGGATTATCGTTTAGCTCCTA 59.019 40.000 0.00 0.00 0.00 2.94
4911 7000 6.477688 CGTTTGGATTATCGTTTAGCTCCTAA 59.522 38.462 0.00 0.00 0.00 2.69
4912 7001 7.010738 CGTTTGGATTATCGTTTAGCTCCTAAA 59.989 37.037 0.00 0.00 34.12 1.85
4913 7002 8.837389 GTTTGGATTATCGTTTAGCTCCTAAAT 58.163 33.333 0.00 0.00 38.07 1.40
4915 7004 9.485206 TTGGATTATCGTTTAGCTCCTAAATAC 57.515 33.333 0.00 0.00 38.07 1.89
4916 7005 8.092687 TGGATTATCGTTTAGCTCCTAAATACC 58.907 37.037 0.00 0.00 38.07 2.73
4917 7006 7.548427 GGATTATCGTTTAGCTCCTAAATACCC 59.452 40.741 0.00 0.00 38.07 3.69
4918 7007 4.677673 TCGTTTAGCTCCTAAATACCCC 57.322 45.455 0.00 0.00 38.07 4.95
4919 7008 4.292643 TCGTTTAGCTCCTAAATACCCCT 58.707 43.478 0.00 0.00 38.07 4.79
4920 7009 4.100498 TCGTTTAGCTCCTAAATACCCCTG 59.900 45.833 0.00 0.00 38.07 4.45
4921 7010 4.141779 CGTTTAGCTCCTAAATACCCCTGT 60.142 45.833 0.00 0.00 38.07 4.00
4922 7011 5.069516 CGTTTAGCTCCTAAATACCCCTGTA 59.930 44.000 0.00 0.00 38.07 2.74
4923 7012 6.407299 CGTTTAGCTCCTAAATACCCCTGTAA 60.407 42.308 0.00 0.00 38.07 2.41
4924 7013 6.742559 TTAGCTCCTAAATACCCCTGTAAG 57.257 41.667 0.00 0.00 0.00 2.34
4925 7014 4.892198 AGCTCCTAAATACCCCTGTAAGA 58.108 43.478 0.00 0.00 34.07 2.10
4926 7015 4.654724 AGCTCCTAAATACCCCTGTAAGAC 59.345 45.833 0.00 0.00 34.07 3.01
4927 7016 4.501058 GCTCCTAAATACCCCTGTAAGACG 60.501 50.000 0.00 0.00 34.07 4.18
4928 7017 4.870636 TCCTAAATACCCCTGTAAGACGA 58.129 43.478 0.00 0.00 34.07 4.20
4929 7018 5.461327 TCCTAAATACCCCTGTAAGACGAT 58.539 41.667 0.00 0.00 34.07 3.73
4930 7019 6.613699 TCCTAAATACCCCTGTAAGACGATA 58.386 40.000 0.00 0.00 34.07 2.92
4931 7020 6.491403 TCCTAAATACCCCTGTAAGACGATAC 59.509 42.308 0.00 0.00 34.07 2.24
4932 7021 6.266103 CCTAAATACCCCTGTAAGACGATACA 59.734 42.308 0.00 0.00 34.07 2.29
4933 7022 5.526506 AATACCCCTGTAAGACGATACAC 57.473 43.478 0.00 0.00 34.07 2.90
4935 7024 1.535437 CCCCTGTAAGACGATACACGC 60.535 57.143 0.00 0.00 46.94 5.34
4936 7025 1.535437 CCCTGTAAGACGATACACGCC 60.535 57.143 0.00 0.00 46.94 5.68
4937 7026 1.133598 CCTGTAAGACGATACACGCCA 59.866 52.381 0.00 0.00 46.94 5.69
4938 7027 2.182825 CTGTAAGACGATACACGCCAC 58.817 52.381 0.00 0.00 46.94 5.01
4939 7028 1.135315 TGTAAGACGATACACGCCACC 60.135 52.381 0.00 0.00 46.94 4.61
4940 7029 1.135315 GTAAGACGATACACGCCACCA 60.135 52.381 0.00 0.00 46.94 4.17
4941 7030 0.108804 AAGACGATACACGCCACCAG 60.109 55.000 0.00 0.00 46.94 4.00
4942 7031 2.125673 ACGATACACGCCACCAGC 60.126 61.111 0.00 0.00 46.94 4.85
4943 7032 2.890474 CGATACACGCCACCAGCC 60.890 66.667 0.00 0.00 38.78 4.85
4944 7033 2.890474 GATACACGCCACCAGCCG 60.890 66.667 0.00 0.00 38.78 5.52
4945 7034 3.659089 GATACACGCCACCAGCCGT 62.659 63.158 0.00 0.00 38.78 5.68
4946 7035 3.659089 ATACACGCCACCAGCCGTC 62.659 63.158 0.00 0.00 38.78 4.79
4951 7040 3.284449 GCCACCAGCCGTCGTTTT 61.284 61.111 0.00 0.00 34.35 2.43
4952 7041 2.637025 CCACCAGCCGTCGTTTTG 59.363 61.111 0.00 0.00 0.00 2.44
4953 7042 1.890041 CCACCAGCCGTCGTTTTGA 60.890 57.895 0.00 0.00 0.00 2.69
4954 7043 1.234615 CCACCAGCCGTCGTTTTGAT 61.235 55.000 0.00 0.00 0.00 2.57
4955 7044 0.591170 CACCAGCCGTCGTTTTGATT 59.409 50.000 0.00 0.00 0.00 2.57
4956 7045 0.872388 ACCAGCCGTCGTTTTGATTC 59.128 50.000 0.00 0.00 0.00 2.52
4957 7046 0.168128 CCAGCCGTCGTTTTGATTCC 59.832 55.000 0.00 0.00 0.00 3.01
4958 7047 0.871722 CAGCCGTCGTTTTGATTCCA 59.128 50.000 0.00 0.00 0.00 3.53
4959 7048 1.135972 CAGCCGTCGTTTTGATTCCAG 60.136 52.381 0.00 0.00 0.00 3.86
4960 7049 0.168128 GCCGTCGTTTTGATTCCAGG 59.832 55.000 0.00 0.00 0.00 4.45
4961 7050 0.168128 CCGTCGTTTTGATTCCAGGC 59.832 55.000 0.00 0.00 0.00 4.85
4962 7051 0.179225 CGTCGTTTTGATTCCAGGCG 60.179 55.000 0.00 0.00 0.00 5.52
4963 7052 1.153353 GTCGTTTTGATTCCAGGCGA 58.847 50.000 0.00 0.00 0.00 5.54
4964 7053 1.533731 GTCGTTTTGATTCCAGGCGAA 59.466 47.619 0.00 0.00 34.14 4.70
4965 7054 2.031508 GTCGTTTTGATTCCAGGCGAAA 60.032 45.455 0.00 0.00 33.08 3.46
4966 7055 2.225491 TCGTTTTGATTCCAGGCGAAAG 59.775 45.455 0.00 0.00 33.08 2.62
4967 7056 2.031157 CGTTTTGATTCCAGGCGAAAGT 60.031 45.455 0.00 0.00 33.08 2.66
4968 7057 3.550030 CGTTTTGATTCCAGGCGAAAGTT 60.550 43.478 0.00 0.00 33.08 2.66
4969 7058 4.319911 CGTTTTGATTCCAGGCGAAAGTTA 60.320 41.667 0.00 0.00 33.08 2.24
4970 7059 4.759516 TTTGATTCCAGGCGAAAGTTAC 57.240 40.909 0.00 0.00 33.08 2.50
4971 7060 2.343101 TGATTCCAGGCGAAAGTTACG 58.657 47.619 0.00 0.00 33.08 3.18
4979 7068 1.993706 CGAAAGTTACGCTACGGCC 59.006 57.895 0.00 0.00 34.44 6.13
4980 7069 0.457337 CGAAAGTTACGCTACGGCCT 60.457 55.000 0.00 0.00 34.44 5.19
4981 7070 0.997196 GAAAGTTACGCTACGGCCTG 59.003 55.000 0.00 0.00 34.44 4.85
4982 7071 0.319405 AAAGTTACGCTACGGCCTGT 59.681 50.000 0.00 2.95 34.44 4.00
4983 7072 1.176527 AAGTTACGCTACGGCCTGTA 58.823 50.000 0.00 4.13 34.44 2.74
4984 7073 1.176527 AGTTACGCTACGGCCTGTAA 58.823 50.000 0.00 0.00 31.20 2.41
4985 7074 1.753073 AGTTACGCTACGGCCTGTAAT 59.247 47.619 0.00 0.00 31.00 1.89
4986 7075 2.951642 AGTTACGCTACGGCCTGTAATA 59.048 45.455 0.00 0.00 31.00 0.98
4987 7076 3.571401 AGTTACGCTACGGCCTGTAATAT 59.429 43.478 0.00 0.00 31.00 1.28
4988 7077 4.761739 AGTTACGCTACGGCCTGTAATATA 59.238 41.667 0.00 0.00 31.00 0.86
4989 7078 3.565905 ACGCTACGGCCTGTAATATAC 57.434 47.619 0.00 0.00 31.20 1.47
4990 7079 2.886523 ACGCTACGGCCTGTAATATACA 59.113 45.455 0.00 0.00 37.13 2.29
4991 7080 3.240069 CGCTACGGCCTGTAATATACAC 58.760 50.000 0.00 0.00 34.46 2.90
4992 7081 3.582780 GCTACGGCCTGTAATATACACC 58.417 50.000 0.00 0.00 34.46 4.16
4993 7082 3.257624 GCTACGGCCTGTAATATACACCT 59.742 47.826 0.00 0.00 34.46 4.00
4994 7083 3.746045 ACGGCCTGTAATATACACCTG 57.254 47.619 0.00 0.00 34.46 4.00
4995 7084 3.036091 ACGGCCTGTAATATACACCTGT 58.964 45.455 0.00 0.00 34.46 4.00
4996 7085 4.217510 ACGGCCTGTAATATACACCTGTA 58.782 43.478 0.00 0.00 34.46 2.74
4997 7086 4.650588 ACGGCCTGTAATATACACCTGTAA 59.349 41.667 0.00 0.00 34.46 2.41
4998 7087 5.129155 ACGGCCTGTAATATACACCTGTAAA 59.871 40.000 0.00 0.00 34.46 2.01
4999 7088 6.183361 ACGGCCTGTAATATACACCTGTAAAT 60.183 38.462 0.00 0.00 34.46 1.40
5000 7089 6.147164 CGGCCTGTAATATACACCTGTAAATG 59.853 42.308 0.00 0.00 34.46 2.32
5001 7090 7.221450 GGCCTGTAATATACACCTGTAAATGA 58.779 38.462 0.00 0.00 34.46 2.57
5002 7091 7.717875 GGCCTGTAATATACACCTGTAAATGAA 59.282 37.037 0.00 0.00 34.46 2.57
5003 7092 9.116067 GCCTGTAATATACACCTGTAAATGAAA 57.884 33.333 0.00 0.00 34.46 2.69
5008 7097 7.979444 ATATACACCTGTAAATGAAATCCGG 57.021 36.000 0.00 0.00 33.76 5.14
5009 7098 4.295141 ACACCTGTAAATGAAATCCGGA 57.705 40.909 6.61 6.61 0.00 5.14
5010 7099 4.007659 ACACCTGTAAATGAAATCCGGAC 58.992 43.478 6.12 0.00 0.00 4.79
5011 7100 3.063452 CACCTGTAAATGAAATCCGGACG 59.937 47.826 6.12 0.00 0.00 4.79
5012 7101 3.267483 CCTGTAAATGAAATCCGGACGT 58.733 45.455 6.12 0.00 0.00 4.34
5013 7102 4.081531 ACCTGTAAATGAAATCCGGACGTA 60.082 41.667 6.12 0.00 0.00 3.57
5014 7103 5.054477 CCTGTAAATGAAATCCGGACGTAT 58.946 41.667 6.12 0.00 0.00 3.06
5015 7104 5.176958 CCTGTAAATGAAATCCGGACGTATC 59.823 44.000 6.12 3.23 0.00 2.24
5016 7105 5.662456 TGTAAATGAAATCCGGACGTATCA 58.338 37.500 6.12 9.63 0.00 2.15
5017 7106 6.107343 TGTAAATGAAATCCGGACGTATCAA 58.893 36.000 6.12 0.00 0.00 2.57
5018 7107 5.479716 AAATGAAATCCGGACGTATCAAC 57.520 39.130 6.12 0.00 0.00 3.18
5019 7108 3.880047 TGAAATCCGGACGTATCAACT 57.120 42.857 6.12 0.00 0.00 3.16
5020 7109 4.196626 TGAAATCCGGACGTATCAACTT 57.803 40.909 6.12 0.00 0.00 2.66
5021 7110 5.327616 TGAAATCCGGACGTATCAACTTA 57.672 39.130 6.12 0.00 0.00 2.24
5022 7111 5.104374 TGAAATCCGGACGTATCAACTTAC 58.896 41.667 6.12 0.00 0.00 2.34
5023 7112 4.724074 AATCCGGACGTATCAACTTACA 57.276 40.909 6.12 0.00 0.00 2.41
5024 7113 3.770263 TCCGGACGTATCAACTTACAG 57.230 47.619 0.00 0.00 0.00 2.74
5025 7114 2.159338 TCCGGACGTATCAACTTACAGC 60.159 50.000 0.00 0.00 0.00 4.40
5026 7115 1.844357 CGGACGTATCAACTTACAGCG 59.156 52.381 0.00 0.00 0.00 5.18
5027 7116 2.476686 CGGACGTATCAACTTACAGCGA 60.477 50.000 0.00 0.00 0.00 4.93
5028 7117 3.703420 GGACGTATCAACTTACAGCGAT 58.297 45.455 0.00 0.00 0.00 4.58
5029 7118 4.110482 GGACGTATCAACTTACAGCGATT 58.890 43.478 0.00 0.00 0.00 3.34
5030 7119 4.206609 GGACGTATCAACTTACAGCGATTC 59.793 45.833 0.00 0.00 0.00 2.52
5031 7120 4.110482 ACGTATCAACTTACAGCGATTCC 58.890 43.478 0.00 0.00 0.00 3.01
5032 7121 4.109766 CGTATCAACTTACAGCGATTCCA 58.890 43.478 0.00 0.00 0.00 3.53
5033 7122 4.565166 CGTATCAACTTACAGCGATTCCAA 59.435 41.667 0.00 0.00 0.00 3.53
5034 7123 5.276395 CGTATCAACTTACAGCGATTCCAAG 60.276 44.000 0.00 0.00 0.00 3.61
5035 7124 2.742053 TCAACTTACAGCGATTCCAAGC 59.258 45.455 0.00 0.00 0.00 4.01
5036 7125 1.359848 ACTTACAGCGATTCCAAGCG 58.640 50.000 0.00 0.00 41.38 4.68
5037 7126 0.652592 CTTACAGCGATTCCAAGCGG 59.347 55.000 0.00 0.00 38.41 5.52
5038 7127 0.742990 TTACAGCGATTCCAAGCGGG 60.743 55.000 0.00 0.00 38.41 6.13
5039 7128 2.587322 TACAGCGATTCCAAGCGGGG 62.587 60.000 0.00 0.00 38.41 5.73
5058 7147 4.945543 CGGGGCCTAAGTTAGTTTACAAAT 59.054 41.667 0.84 0.00 0.00 2.32
5061 7150 6.037500 GGGGCCTAAGTTAGTTTACAAATACG 59.962 42.308 0.84 0.00 0.00 3.06
5076 7165 3.754188 AATACGCGTCGTCTTTAGTCT 57.246 42.857 18.63 0.00 41.54 3.24
5132 7224 6.983890 CCACTTTTGGTATTTGTATATTGCCC 59.016 38.462 0.00 0.00 38.23 5.36
5135 7227 6.627395 TTTGGTATTTGTATATTGCCCGAG 57.373 37.500 0.00 0.00 0.00 4.63
5156 7248 6.238374 CCGAGAAAAGTTTTTAGCTTCAGTCA 60.238 38.462 1.64 0.00 0.00 3.41
5158 7250 7.696453 CGAGAAAAGTTTTTAGCTTCAGTCAAA 59.304 33.333 1.64 0.00 0.00 2.69
5159 7251 9.353999 GAGAAAAGTTTTTAGCTTCAGTCAAAA 57.646 29.630 1.64 0.00 0.00 2.44
5167 7259 9.665719 TTTTTAGCTTCAGTCAAAATTTTCCTT 57.334 25.926 0.00 0.00 0.00 3.36
5218 7310 3.365265 GGCCTTGAACAGCCCACG 61.365 66.667 0.00 0.00 43.76 4.94
5225 7317 3.845625 GAACAGCCCACGTTCAAAG 57.154 52.632 0.00 0.00 41.92 2.77
5232 7324 1.444836 CCCACGTTCAAAGGCGATAA 58.555 50.000 0.00 0.00 0.00 1.75
5263 7355 4.411136 CAAACACGGTGGGTTTGC 57.589 55.556 13.48 0.00 45.73 3.68
5315 7407 0.383231 GGCAGAGGCACATAACATGC 59.617 55.000 0.00 0.00 43.71 4.06
5381 7590 3.986442 TGTGTGTTTCCATGTGTGATG 57.014 42.857 0.00 0.00 0.00 3.07
5421 7630 0.790495 CATGTGTGCTTGCTTACGCG 60.790 55.000 3.53 3.53 39.65 6.01
5427 7636 2.769617 CTTGCTTACGCGTGTCCG 59.230 61.111 24.59 8.27 39.65 4.79
5453 7677 0.880441 TGTTAACTGCACATGCGCAT 59.120 45.000 19.28 19.28 45.83 4.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 9.500785 CCAAATGTTACCTCCAAATGTTAAATT 57.499 29.630 0.00 0.00 0.00 1.82
15 16 8.875168 TCCAAATGTTACCTCCAAATGTTAAAT 58.125 29.630 0.00 0.00 0.00 1.40
16 17 8.251383 TCCAAATGTTACCTCCAAATGTTAAA 57.749 30.769 0.00 0.00 0.00 1.52
17 18 7.841282 TCCAAATGTTACCTCCAAATGTTAA 57.159 32.000 0.00 0.00 0.00 2.01
18 19 7.841282 TTCCAAATGTTACCTCCAAATGTTA 57.159 32.000 0.00 0.00 0.00 2.41
19 20 6.739331 TTCCAAATGTTACCTCCAAATGTT 57.261 33.333 0.00 0.00 0.00 2.71
20 21 6.933514 ATTCCAAATGTTACCTCCAAATGT 57.066 33.333 0.00 0.00 0.00 2.71
21 22 7.385267 TGAATTCCAAATGTTACCTCCAAATG 58.615 34.615 2.27 0.00 0.00 2.32
22 23 7.552050 TGAATTCCAAATGTTACCTCCAAAT 57.448 32.000 2.27 0.00 0.00 2.32
23 24 6.985653 TGAATTCCAAATGTTACCTCCAAA 57.014 33.333 2.27 0.00 0.00 3.28
24 25 6.553100 AGTTGAATTCCAAATGTTACCTCCAA 59.447 34.615 2.27 0.00 36.36 3.53
25 26 6.074648 AGTTGAATTCCAAATGTTACCTCCA 58.925 36.000 2.27 0.00 36.36 3.86
26 27 6.590234 AGTTGAATTCCAAATGTTACCTCC 57.410 37.500 2.27 0.00 36.36 4.30
27 28 6.314784 CGAGTTGAATTCCAAATGTTACCTC 58.685 40.000 2.27 0.00 36.36 3.85
28 29 5.335661 GCGAGTTGAATTCCAAATGTTACCT 60.336 40.000 2.27 0.00 36.36 3.08
29 30 4.857037 GCGAGTTGAATTCCAAATGTTACC 59.143 41.667 2.27 0.00 36.36 2.85
30 31 5.699839 AGCGAGTTGAATTCCAAATGTTAC 58.300 37.500 2.27 0.00 36.36 2.50
31 32 5.957842 AGCGAGTTGAATTCCAAATGTTA 57.042 34.783 2.27 0.00 36.36 2.41
32 33 4.853924 AGCGAGTTGAATTCCAAATGTT 57.146 36.364 2.27 0.00 36.36 2.71
33 34 4.853924 AAGCGAGTTGAATTCCAAATGT 57.146 36.364 2.27 0.00 36.36 2.71
34 35 6.529463 AAAAAGCGAGTTGAATTCCAAATG 57.471 33.333 2.27 0.00 36.36 2.32
46 47 7.681939 TTGACCTATGAATAAAAAGCGAGTT 57.318 32.000 0.00 0.00 0.00 3.01
50 51 7.489113 AGCATTTTGACCTATGAATAAAAAGCG 59.511 33.333 0.00 0.00 38.90 4.68
63 64 7.438564 GGGAAAAACTTAAGCATTTTGACCTA 58.561 34.615 18.88 0.00 31.50 3.08
105 106 4.202101 TGTTCATTGTCACACCCAAATGAC 60.202 41.667 0.00 0.00 44.56 3.06
106 107 3.956848 TGTTCATTGTCACACCCAAATGA 59.043 39.130 0.00 0.00 0.00 2.57
161 168 0.388907 CTCCTGCGTGCCAAAAATGG 60.389 55.000 0.00 0.00 0.00 3.16
194 201 3.193479 GGACGAAAATCCATTTTGGCTCT 59.807 43.478 1.94 0.00 39.97 4.09
211 218 5.717078 AGTTTAACACTCTGTATGGACGA 57.283 39.130 0.00 0.00 0.00 4.20
236 243 0.384230 CGTACCTGTGCGTGCTTTTG 60.384 55.000 0.00 0.00 34.04 2.44
255 262 5.620206 GGAGGGAGTACTACTACTAGTTCC 58.380 50.000 4.77 0.00 34.79 3.62
277 287 1.881324 ACGGGGTGTAAATCAAAACGG 59.119 47.619 0.00 0.00 0.00 4.44
278 288 4.950434 ATACGGGGTGTAAATCAAAACG 57.050 40.909 0.00 0.00 36.44 3.60
284 294 4.040095 AGGAGCTAATACGGGGTGTAAATC 59.960 45.833 0.00 0.00 36.44 2.17
291 301 2.963782 CACTTAGGAGCTAATACGGGGT 59.036 50.000 0.00 0.00 0.00 4.95
519 543 2.672651 CCGCCCATTGTGCTGTGA 60.673 61.111 0.00 0.00 0.00 3.58
520 544 4.424566 GCCGCCCATTGTGCTGTG 62.425 66.667 0.00 0.00 0.00 3.66
523 547 4.992740 TTGGCCGCCCATTGTGCT 62.993 61.111 7.03 0.00 41.78 4.40
524 548 4.440127 CTTGGCCGCCCATTGTGC 62.440 66.667 7.03 0.00 41.78 4.57
545 569 1.645034 CACGTGGCTTCTGATCGATT 58.355 50.000 7.95 0.00 0.00 3.34
559 583 1.507141 GGTTCTGAGGTTGGCACGTG 61.507 60.000 12.28 12.28 0.00 4.49
599 623 1.938577 CGATGGCAATTGAGAGGACAG 59.061 52.381 10.34 0.00 0.00 3.51
608 632 0.096976 GACACCGACGATGGCAATTG 59.903 55.000 0.00 0.00 0.00 2.32
610 634 1.449601 GGACACCGACGATGGCAAT 60.450 57.895 0.00 0.00 0.00 3.56
642 666 7.603651 AGCGTCTTCTATTTTCTTTACAGAGA 58.396 34.615 0.00 0.00 0.00 3.10
659 683 3.915536 ACTTCCTCTTGTAAGCGTCTTC 58.084 45.455 0.00 0.00 0.00 2.87
681 705 0.319383 AAATTGCATTTGTCGCCGCA 60.319 45.000 0.00 0.00 0.00 5.69
702 727 2.058705 TGATGGGTCAGTGGTACCAAA 58.941 47.619 18.31 2.06 38.87 3.28
728 753 1.468736 GGTAATCAGTGACGACCGACC 60.469 57.143 9.04 1.53 0.00 4.79
729 754 1.905449 GGTAATCAGTGACGACCGAC 58.095 55.000 9.04 0.00 0.00 4.79
731 756 2.939782 CGGTAATCAGTGACGACCG 58.060 57.895 25.21 25.21 46.16 4.79
816 851 1.539388 TGCTTGGATTGTGTAAAGCCG 59.461 47.619 3.99 0.00 43.46 5.52
834 869 1.449778 GGGGAGTACGCCTTCTTGC 60.450 63.158 15.73 0.00 44.32 4.01
852 887 1.480219 GCTCGCGGTTACGGAATCAG 61.480 60.000 6.13 0.00 41.36 2.90
883 918 2.135933 CCTTTGCTATAGGCTGTACGC 58.864 52.381 0.00 1.61 42.39 4.42
919 960 0.812549 GGGGTCTGACGAGTCTTCTC 59.187 60.000 1.07 0.00 37.35 2.87
1104 1161 1.671379 GGCCTTGACGGTGGACTTC 60.671 63.158 0.00 0.00 34.25 3.01
1177 1234 2.844839 GATCGAGGGGTGGGGAGG 60.845 72.222 0.00 0.00 0.00 4.30
1266 1324 2.033424 CGTCATATCAGCGAGACCAGAA 59.967 50.000 0.00 0.00 0.00 3.02
1282 1340 1.040893 TCCTACATCGCCACCGTCAT 61.041 55.000 0.00 0.00 35.54 3.06
1287 1345 3.290776 GATGTCCTACATCGCCACC 57.709 57.895 4.41 0.00 44.55 4.61
1294 1352 5.955355 GCCCTAGAATCTAGATGTCCTACAT 59.045 44.000 18.25 0.00 42.43 2.29
1303 1367 3.868062 AGCAAGGCCCTAGAATCTAGAT 58.132 45.455 18.25 0.00 0.00 1.98
1353 1417 9.196552 CTCTGTTCCTTGACCAAAATAAATTTC 57.803 33.333 0.00 0.00 0.00 2.17
1354 1418 8.923270 TCTCTGTTCCTTGACCAAAATAAATTT 58.077 29.630 0.00 0.00 0.00 1.82
1428 1496 2.327568 GGTACGGACGATTCAAACGAA 58.672 47.619 0.00 0.00 34.70 3.85
1472 1559 7.755822 CGTGCTCTAGTAAGTTTCAAAGTAGAT 59.244 37.037 0.00 0.00 0.00 1.98
1474 1561 6.308282 CCGTGCTCTAGTAAGTTTCAAAGTAG 59.692 42.308 0.00 0.00 0.00 2.57
1489 1580 5.613358 AATTTCAGTTTTCCGTGCTCTAG 57.387 39.130 0.00 0.00 0.00 2.43
1490 1581 5.529430 TCAAATTTCAGTTTTCCGTGCTCTA 59.471 36.000 0.00 0.00 0.00 2.43
1492 1583 4.606961 TCAAATTTCAGTTTTCCGTGCTC 58.393 39.130 0.00 0.00 0.00 4.26
1493 1584 4.647424 TCAAATTTCAGTTTTCCGTGCT 57.353 36.364 0.00 0.00 0.00 4.40
1494 1585 4.803613 ACTTCAAATTTCAGTTTTCCGTGC 59.196 37.500 0.00 0.00 0.00 5.34
1544 1635 4.561735 GAGACTATTCTCTGGTTCCTCG 57.438 50.000 2.94 0.00 44.54 4.63
1581 1686 9.461312 AAAGCAAGAAATCACCATAATACAGTA 57.539 29.630 0.00 0.00 0.00 2.74
1588 1693 8.203485 ACAAAAGAAAGCAAGAAATCACCATAA 58.797 29.630 0.00 0.00 0.00 1.90
1590 1695 6.585416 ACAAAAGAAAGCAAGAAATCACCAT 58.415 32.000 0.00 0.00 0.00 3.55
1616 1721 3.000727 ACGATTTCGGCTCTGGTTTTAG 58.999 45.455 4.84 0.00 44.95 1.85
1627 1732 0.872388 ACAGTCCAAACGATTTCGGC 59.128 50.000 4.84 0.00 44.95 5.54
1647 1752 3.307059 GGTGTAGTGGAGCAAGAATGTCT 60.307 47.826 0.00 0.00 0.00 3.41
1648 1753 3.003480 GGTGTAGTGGAGCAAGAATGTC 58.997 50.000 0.00 0.00 0.00 3.06
1649 1754 2.371841 TGGTGTAGTGGAGCAAGAATGT 59.628 45.455 0.00 0.00 0.00 2.71
1650 1755 3.057969 TGGTGTAGTGGAGCAAGAATG 57.942 47.619 0.00 0.00 0.00 2.67
1652 1757 3.788227 AATGGTGTAGTGGAGCAAGAA 57.212 42.857 0.00 0.00 0.00 2.52
1653 1758 3.580895 TGTAATGGTGTAGTGGAGCAAGA 59.419 43.478 0.00 0.00 0.00 3.02
1655 1912 4.019771 TGATGTAATGGTGTAGTGGAGCAA 60.020 41.667 0.00 0.00 0.00 3.91
1663 1920 6.016693 TGGTTTTGTGTGATGTAATGGTGTAG 60.017 38.462 0.00 0.00 0.00 2.74
1679 1936 3.925913 CCACAACTGTTTCTGGTTTTGTG 59.074 43.478 5.48 5.48 42.17 3.33
1709 3164 1.694150 CTGTGAGTTTGGAGGAGACCA 59.306 52.381 0.00 0.00 38.24 4.02
1710 3165 1.609320 GCTGTGAGTTTGGAGGAGACC 60.609 57.143 0.00 0.00 0.00 3.85
1711 3166 1.070758 TGCTGTGAGTTTGGAGGAGAC 59.929 52.381 0.00 0.00 0.00 3.36
1712 3167 1.423584 TGCTGTGAGTTTGGAGGAGA 58.576 50.000 0.00 0.00 0.00 3.71
1713 3168 2.260844 TTGCTGTGAGTTTGGAGGAG 57.739 50.000 0.00 0.00 0.00 3.69
1714 3169 2.297701 GTTTGCTGTGAGTTTGGAGGA 58.702 47.619 0.00 0.00 0.00 3.71
1716 3171 1.338020 GGGTTTGCTGTGAGTTTGGAG 59.662 52.381 0.00 0.00 0.00 3.86
1717 3172 1.341482 TGGGTTTGCTGTGAGTTTGGA 60.341 47.619 0.00 0.00 0.00 3.53
1719 3174 2.023673 TCTGGGTTTGCTGTGAGTTTG 58.976 47.619 0.00 0.00 0.00 2.93
1754 3209 3.578282 TCAACATCTCCACTGTGAAGCTA 59.422 43.478 9.86 0.00 0.00 3.32
1782 3237 2.725221 ATGAAGAGGATGAAGGTGGC 57.275 50.000 0.00 0.00 0.00 5.01
1790 3245 3.744942 CACAATCGCCTATGAAGAGGATG 59.255 47.826 0.00 0.00 39.15 3.51
1791 3246 3.643320 TCACAATCGCCTATGAAGAGGAT 59.357 43.478 0.00 0.00 39.15 3.24
1811 3266 3.387699 TGGAGATAGTGAATTCGCCATCA 59.612 43.478 23.42 6.68 36.98 3.07
1836 3291 0.977395 ACTCTCAGCCCAAGTACACC 59.023 55.000 0.00 0.00 0.00 4.16
1900 3355 2.828868 GTCCTGGCACTGACACCA 59.171 61.111 7.37 0.00 32.58 4.17
1901 3356 2.357517 CGTCCTGGCACTGACACC 60.358 66.667 11.64 0.00 31.99 4.16
1903 3358 1.532078 TACCGTCCTGGCACTGACA 60.532 57.895 11.64 0.00 43.94 3.58
1904 3359 1.080025 GTACCGTCCTGGCACTGAC 60.080 63.158 2.98 2.98 43.94 3.51
1917 3372 0.729116 CTTTGGCATGCTCTGTACCG 59.271 55.000 18.92 0.00 0.00 4.02
1921 3376 1.202855 ACAGTCTTTGGCATGCTCTGT 60.203 47.619 18.92 17.29 0.00 3.41
1929 3384 0.843309 TCCTCCAACAGTCTTTGGCA 59.157 50.000 8.24 0.00 45.12 4.92
1934 3389 2.304180 CCTGTCATCCTCCAACAGTCTT 59.696 50.000 0.00 0.00 38.97 3.01
1959 3414 3.229293 TGATAGCTGGAGGTGAGATGAG 58.771 50.000 0.00 0.00 0.00 2.90
1988 3443 2.920912 GTCGGTGGGGTGACAGGA 60.921 66.667 0.00 0.00 35.20 3.86
1994 3449 4.704833 CCTGCTGTCGGTGGGGTG 62.705 72.222 0.00 0.00 0.00 4.61
2014 3469 3.197549 TCTCCAATCATGTGAATCGACCA 59.802 43.478 0.00 0.00 0.00 4.02
2049 3504 2.349886 CACCTAAAGAGAGCGAATGCAC 59.650 50.000 0.00 0.00 46.23 4.57
2097 3552 7.042658 GGTGGCTGATAACGATTACTCTAAAAG 60.043 40.741 0.00 0.00 0.00 2.27
2111 3566 2.514803 ACAGGTTTGGTGGCTGATAAC 58.485 47.619 0.00 0.00 0.00 1.89
2162 3617 9.541143 GGAAAACTAAAAATCCTCACATTTTGA 57.459 29.630 0.00 0.00 36.33 2.69
2163 3618 9.323985 TGGAAAACTAAAAATCCTCACATTTTG 57.676 29.630 0.00 0.00 36.33 2.44
2164 3619 9.898152 TTGGAAAACTAAAAATCCTCACATTTT 57.102 25.926 0.00 0.00 37.53 1.82
2165 3620 9.898152 TTTGGAAAACTAAAAATCCTCACATTT 57.102 25.926 0.00 0.00 33.02 2.32
2179 3634 4.646945 TCTGTGGTGCATTTGGAAAACTAA 59.353 37.500 0.00 0.00 0.00 2.24
2266 3721 3.560025 CCTCCAGGTGCTGATTACTTGTT 60.560 47.826 0.00 0.00 32.44 2.83
2412 3868 4.074970 ACTAGGCACAATCTTGAAACAGG 58.925 43.478 0.00 0.00 0.00 4.00
2415 3871 5.886960 ATGACTAGGCACAATCTTGAAAC 57.113 39.130 0.00 0.00 0.00 2.78
2442 3898 4.079730 TCTCTGGCTCCTCTCACATAGTAA 60.080 45.833 0.00 0.00 0.00 2.24
2445 3901 2.942804 TCTCTGGCTCCTCTCACATAG 58.057 52.381 0.00 0.00 0.00 2.23
2485 3941 2.813754 TCTGTTTGCTCCATTGTAGTGC 59.186 45.455 0.00 0.00 0.00 4.40
2515 3971 1.255667 TAGAGGTGTTCAGCCCGTCC 61.256 60.000 0.00 0.00 0.00 4.79
2551 4010 3.878667 GATTCTGCCGGGGAGGGG 61.879 72.222 16.05 0.00 41.48 4.79
2552 4011 1.127567 TATGATTCTGCCGGGGAGGG 61.128 60.000 16.05 0.00 41.48 4.30
2553 4012 0.035458 GTATGATTCTGCCGGGGAGG 59.965 60.000 16.05 0.00 44.97 4.30
2554 4013 1.051812 AGTATGATTCTGCCGGGGAG 58.948 55.000 9.61 9.61 0.00 4.30
2556 4015 3.312404 CAGTATGATTCTGCCGGGG 57.688 57.895 2.18 0.00 39.69 5.73
2562 4021 5.582269 TCTCTTTTTCGGCAGTATGATTCTG 59.418 40.000 0.00 0.00 39.69 3.02
2577 4047 9.445786 TCAATGACAACGTAAATTCTCTTTTTC 57.554 29.630 0.00 0.00 0.00 2.29
2578 4048 9.450807 CTCAATGACAACGTAAATTCTCTTTTT 57.549 29.630 0.00 0.00 0.00 1.94
2579 4049 8.621286 ACTCAATGACAACGTAAATTCTCTTTT 58.379 29.630 0.00 0.00 0.00 2.27
2580 4050 8.070171 CACTCAATGACAACGTAAATTCTCTTT 58.930 33.333 0.00 0.00 0.00 2.52
2581 4051 7.441157 TCACTCAATGACAACGTAAATTCTCTT 59.559 33.333 0.00 0.00 29.99 2.85
2621 4486 7.284034 AGAGCCATGGTATGATTTAGAACAAAG 59.716 37.037 14.67 0.00 0.00 2.77
2688 4553 7.775093 AGCTGTTGCCTAAATCTTCATACAATA 59.225 33.333 0.00 0.00 40.80 1.90
2690 4555 5.945784 AGCTGTTGCCTAAATCTTCATACAA 59.054 36.000 0.00 0.00 40.80 2.41
2733 4598 4.602340 TCTTCCTGTTCAGTTCAGTACC 57.398 45.455 0.00 0.00 0.00 3.34
2751 4616 5.852250 ACCAGGTAAGGCCAGATAATATCTT 59.148 40.000 5.01 0.00 37.58 2.40
2821 4690 6.804677 AGTACTGCTACTTTCTCTCATCATG 58.195 40.000 0.00 0.00 27.62 3.07
2874 4743 7.447238 ACCATTTAAGTTTAGCTGCTACTTTCA 59.553 33.333 19.58 9.73 34.26 2.69
2879 4748 6.801862 CACAACCATTTAAGTTTAGCTGCTAC 59.198 38.462 9.27 1.15 0.00 3.58
2880 4749 6.488683 ACACAACCATTTAAGTTTAGCTGCTA 59.511 34.615 5.02 5.02 0.00 3.49
2881 4750 5.301805 ACACAACCATTTAAGTTTAGCTGCT 59.698 36.000 7.57 7.57 0.00 4.24
2882 4751 5.402270 CACACAACCATTTAAGTTTAGCTGC 59.598 40.000 0.00 0.00 0.00 5.25
2883 4752 6.734137 TCACACAACCATTTAAGTTTAGCTG 58.266 36.000 0.00 0.00 0.00 4.24
2991 5046 0.250640 CTGACTGCCTCAGTGCCTTT 60.251 55.000 3.98 0.00 45.44 3.11
3002 5057 1.676746 ATGCACATGATCTGACTGCC 58.323 50.000 0.00 0.00 0.00 4.85
3004 5059 6.613755 TTCATTATGCACATGATCTGACTG 57.386 37.500 10.49 0.00 30.63 3.51
3126 5183 5.012251 TGGTTCTGCACTTACACCTAATACA 59.988 40.000 0.00 0.00 0.00 2.29
3177 5234 2.548480 CACTATATCGTCGCTCCAGTCA 59.452 50.000 0.00 0.00 0.00 3.41
3214 5271 1.296392 CAAGGGATGCGTGGAGTCA 59.704 57.895 0.00 0.00 0.00 3.41
3227 5284 0.392193 CTCTGGTGCTAGCACAAGGG 60.392 60.000 39.49 36.38 45.53 3.95
3258 5315 2.646798 AGAGGGGAAAGACAAGAAGCAT 59.353 45.455 0.00 0.00 0.00 3.79
3259 5316 2.039084 GAGAGGGGAAAGACAAGAAGCA 59.961 50.000 0.00 0.00 0.00 3.91
3284 5344 6.071320 GCCTGGGTTTATGGAGATTAGAAAT 58.929 40.000 0.00 0.00 0.00 2.17
3360 5423 4.501058 GGTTGGGGAGTTGATCGTAGTATC 60.501 50.000 0.00 0.00 0.00 2.24
3361 5424 3.387050 GGTTGGGGAGTTGATCGTAGTAT 59.613 47.826 0.00 0.00 0.00 2.12
3365 5428 1.553248 CTGGTTGGGGAGTTGATCGTA 59.447 52.381 0.00 0.00 0.00 3.43
3366 5429 0.324943 CTGGTTGGGGAGTTGATCGT 59.675 55.000 0.00 0.00 0.00 3.73
3367 5430 1.026718 GCTGGTTGGGGAGTTGATCG 61.027 60.000 0.00 0.00 0.00 3.69
3392 5455 4.081531 CCTTTGCTGAATGGCTAAATTGGA 60.082 41.667 0.00 0.00 0.00 3.53
3408 5471 1.384191 CCTAGGGTTGGCCTTTGCT 59.616 57.895 3.32 0.00 37.74 3.91
3498 5561 4.079970 AGCATGCATCCATCCAAAGATAG 58.920 43.478 21.98 0.00 0.00 2.08
3576 5639 7.699709 TCTTTTGGGTATTATCTATCCACCA 57.300 36.000 0.00 0.00 0.00 4.17
3643 5706 6.230472 TGCTCTTCTCTTTAACAGCACAATA 58.770 36.000 0.00 0.00 32.00 1.90
3658 5721 5.528043 TCCATATTCACTCTGCTCTTCTC 57.472 43.478 0.00 0.00 0.00 2.87
3660 5723 5.851720 TCATCCATATTCACTCTGCTCTTC 58.148 41.667 0.00 0.00 0.00 2.87
3661 5724 5.883685 TCATCCATATTCACTCTGCTCTT 57.116 39.130 0.00 0.00 0.00 2.85
3757 5822 6.437793 ACCATAGTAGGAGCATATTACCACTC 59.562 42.308 0.00 0.00 0.00 3.51
3767 5832 3.107601 ACACACACCATAGTAGGAGCAT 58.892 45.455 0.00 0.00 0.00 3.79
3807 5875 7.309805 GGGGCTAAATTATGATAGGCGAAATTT 60.310 37.037 0.00 0.00 43.50 1.82
3808 5876 6.152831 GGGGCTAAATTATGATAGGCGAAATT 59.847 38.462 0.00 0.00 43.50 1.82
3809 5877 5.652452 GGGGCTAAATTATGATAGGCGAAAT 59.348 40.000 0.00 0.00 43.50 2.17
3813 5881 3.689649 GTGGGGCTAAATTATGATAGGCG 59.310 47.826 3.24 0.00 43.50 5.52
3901 5969 7.204604 TCAGACAGTACGAAAACACTGAAATA 58.795 34.615 8.61 0.00 43.99 1.40
3964 6032 1.963515 ACAGCCTTTGCCCTTTTACAG 59.036 47.619 0.00 0.00 38.69 2.74
3976 6044 4.953579 TCAAGTTCCTTAAACACAGCCTTT 59.046 37.500 0.00 0.00 40.56 3.11
4106 6174 8.694540 ACATAACAGCATAATATTGAAGGCAAA 58.305 29.630 0.00 0.00 37.59 3.68
4244 6312 1.150081 CCCACCATCCTCTGCATCC 59.850 63.158 0.00 0.00 0.00 3.51
4455 6528 3.365832 GCCACTTTCATATGCATCAACG 58.634 45.455 0.19 0.00 0.00 4.10
4497 6570 7.165460 TCAAAGATCGTCCTTGACACTAATA 57.835 36.000 0.00 0.00 32.09 0.98
4500 6573 5.462530 TTCAAAGATCGTCCTTGACACTA 57.537 39.130 3.14 0.00 32.09 2.74
4557 6630 0.521735 GCAAGGCCTTTGTAACCTCG 59.478 55.000 17.61 1.81 39.08 4.63
4610 6683 6.721571 ACTTTAACACGAATACCAGTGATG 57.278 37.500 2.42 0.00 40.56 3.07
4646 6719 2.427095 GGGATTGCCACAAAGTATGGTC 59.573 50.000 0.00 0.00 39.63 4.02
4698 6771 3.382546 GCAATCAATCAGTATGCAAGGGT 59.617 43.478 0.00 0.00 37.00 4.34
4723 6796 0.036010 ATCTGGGGTTTGTGCTCGAG 60.036 55.000 8.45 8.45 0.00 4.04
4726 6799 0.321653 ACGATCTGGGGTTTGTGCTC 60.322 55.000 0.00 0.00 0.00 4.26
4782 6855 8.687824 ACTTCAAAAACTGTGTACAATTGAAG 57.312 30.769 24.86 24.86 35.43 3.02
4795 6868 2.290641 AGGCTGCGTACTTCAAAAACTG 59.709 45.455 0.00 0.00 0.00 3.16
4796 6869 2.548480 GAGGCTGCGTACTTCAAAAACT 59.452 45.455 0.00 0.00 0.00 2.66
4803 6891 2.301577 ATTGAGAGGCTGCGTACTTC 57.698 50.000 0.00 0.00 0.00 3.01
4813 6901 9.643693 TTCTTTATTCAATGAAAATTGAGAGGC 57.356 29.630 0.00 0.00 41.06 4.70
4864 6953 4.081586 CGGGGCCTTAGATATTCTTACCTC 60.082 50.000 0.84 0.00 0.00 3.85
4876 6965 0.996583 AATCCAAACGGGGCCTTAGA 59.003 50.000 0.84 0.00 37.22 2.10
4877 6966 2.721425 TAATCCAAACGGGGCCTTAG 57.279 50.000 0.84 0.00 37.22 2.18
4878 6967 2.485835 CGATAATCCAAACGGGGCCTTA 60.486 50.000 0.84 0.00 37.22 2.69
4879 6968 1.749286 CGATAATCCAAACGGGGCCTT 60.749 52.381 0.84 0.00 37.22 4.35
4880 6969 0.179029 CGATAATCCAAACGGGGCCT 60.179 55.000 0.84 0.00 37.22 5.19
4881 6970 0.464916 ACGATAATCCAAACGGGGCC 60.465 55.000 0.00 0.00 37.22 5.80
4882 6971 1.385528 AACGATAATCCAAACGGGGC 58.614 50.000 0.00 0.00 37.22 5.80
4883 6972 3.002965 GCTAAACGATAATCCAAACGGGG 59.997 47.826 0.00 0.00 37.22 5.73
4884 6973 3.875134 AGCTAAACGATAATCCAAACGGG 59.125 43.478 0.00 0.00 38.37 5.28
4885 6974 4.025145 GGAGCTAAACGATAATCCAAACGG 60.025 45.833 0.00 0.00 0.00 4.44
4886 6975 4.809426 AGGAGCTAAACGATAATCCAAACG 59.191 41.667 0.00 0.00 0.00 3.60
4887 6976 7.781548 TTAGGAGCTAAACGATAATCCAAAC 57.218 36.000 0.00 0.00 0.00 2.93
4888 6977 8.974060 ATTTAGGAGCTAAACGATAATCCAAA 57.026 30.769 0.00 0.00 38.51 3.28
4889 6978 9.485206 GTATTTAGGAGCTAAACGATAATCCAA 57.515 33.333 0.00 0.00 38.51 3.53
4890 6979 8.092687 GGTATTTAGGAGCTAAACGATAATCCA 58.907 37.037 0.00 0.00 38.51 3.41
4891 6980 7.548427 GGGTATTTAGGAGCTAAACGATAATCC 59.452 40.741 0.00 0.00 38.51 3.01
4892 6981 7.548427 GGGGTATTTAGGAGCTAAACGATAATC 59.452 40.741 0.00 0.00 38.51 1.75
4893 6982 7.237055 AGGGGTATTTAGGAGCTAAACGATAAT 59.763 37.037 0.00 0.00 38.51 1.28
4894 6983 6.556116 AGGGGTATTTAGGAGCTAAACGATAA 59.444 38.462 0.00 0.00 38.51 1.75
4895 6984 6.014840 CAGGGGTATTTAGGAGCTAAACGATA 60.015 42.308 0.00 0.00 38.51 2.92
4896 6985 4.906060 AGGGGTATTTAGGAGCTAAACGAT 59.094 41.667 0.00 0.00 38.51 3.73
4897 6986 4.100498 CAGGGGTATTTAGGAGCTAAACGA 59.900 45.833 0.00 0.00 38.51 3.85
4898 6987 4.141779 ACAGGGGTATTTAGGAGCTAAACG 60.142 45.833 0.00 0.00 38.51 3.60
4899 6988 5.369409 ACAGGGGTATTTAGGAGCTAAAC 57.631 43.478 0.00 0.00 38.51 2.01
4900 6989 6.904654 TCTTACAGGGGTATTTAGGAGCTAAA 59.095 38.462 0.00 0.00 39.73 1.85
4901 6990 6.325804 GTCTTACAGGGGTATTTAGGAGCTAA 59.674 42.308 0.00 0.00 0.00 3.09
4902 6991 5.837438 GTCTTACAGGGGTATTTAGGAGCTA 59.163 44.000 0.00 0.00 0.00 3.32
4903 6992 4.654724 GTCTTACAGGGGTATTTAGGAGCT 59.345 45.833 0.00 0.00 0.00 4.09
4904 6993 4.501058 CGTCTTACAGGGGTATTTAGGAGC 60.501 50.000 0.00 0.00 0.00 4.70
4905 6994 4.891756 TCGTCTTACAGGGGTATTTAGGAG 59.108 45.833 0.00 0.00 0.00 3.69
4906 6995 4.870636 TCGTCTTACAGGGGTATTTAGGA 58.129 43.478 0.00 0.00 0.00 2.94
4907 6996 5.803237 ATCGTCTTACAGGGGTATTTAGG 57.197 43.478 0.00 0.00 0.00 2.69
4908 6997 7.144000 GTGTATCGTCTTACAGGGGTATTTAG 58.856 42.308 0.00 0.00 32.92 1.85
4909 6998 6.238731 CGTGTATCGTCTTACAGGGGTATTTA 60.239 42.308 7.34 0.00 35.40 1.40
4910 6999 5.450965 CGTGTATCGTCTTACAGGGGTATTT 60.451 44.000 7.34 0.00 35.40 1.40
4911 7000 4.037208 CGTGTATCGTCTTACAGGGGTATT 59.963 45.833 7.34 0.00 35.40 1.89
4912 7001 3.567164 CGTGTATCGTCTTACAGGGGTAT 59.433 47.826 7.34 0.00 35.40 2.73
4913 7002 2.945008 CGTGTATCGTCTTACAGGGGTA 59.055 50.000 7.34 0.00 35.40 3.69
4914 7003 1.747355 CGTGTATCGTCTTACAGGGGT 59.253 52.381 7.34 0.00 35.40 4.95
4915 7004 1.535437 GCGTGTATCGTCTTACAGGGG 60.535 57.143 13.33 3.12 42.13 4.79
4916 7005 1.535437 GGCGTGTATCGTCTTACAGGG 60.535 57.143 13.33 4.77 41.33 4.45
4917 7006 1.133598 TGGCGTGTATCGTCTTACAGG 59.866 52.381 9.58 9.58 45.15 4.00
4918 7007 2.182825 GTGGCGTGTATCGTCTTACAG 58.817 52.381 0.00 0.00 45.15 2.74
4919 7008 1.135315 GGTGGCGTGTATCGTCTTACA 60.135 52.381 0.00 0.00 45.15 2.41
4920 7009 1.135315 TGGTGGCGTGTATCGTCTTAC 60.135 52.381 0.00 0.00 45.15 2.34
4921 7010 1.133598 CTGGTGGCGTGTATCGTCTTA 59.866 52.381 0.00 0.00 45.15 2.10
4922 7011 0.108804 CTGGTGGCGTGTATCGTCTT 60.109 55.000 0.00 0.00 45.15 3.01
4923 7012 1.511305 CTGGTGGCGTGTATCGTCT 59.489 57.895 0.00 0.00 45.15 4.18
4924 7013 2.165301 GCTGGTGGCGTGTATCGTC 61.165 63.158 0.00 0.00 45.13 4.20
4925 7014 2.125673 GCTGGTGGCGTGTATCGT 60.126 61.111 0.00 0.00 42.13 3.73
4926 7015 2.890474 GGCTGGTGGCGTGTATCG 60.890 66.667 0.00 0.00 42.94 2.92
4934 7023 3.284449 AAAACGACGGCTGGTGGC 61.284 61.111 0.00 0.00 40.90 5.01
4935 7024 1.234615 ATCAAAACGACGGCTGGTGG 61.235 55.000 0.00 0.00 0.00 4.61
4936 7025 0.591170 AATCAAAACGACGGCTGGTG 59.409 50.000 0.00 0.00 0.00 4.17
4937 7026 0.872388 GAATCAAAACGACGGCTGGT 59.128 50.000 0.00 0.00 0.00 4.00
4938 7027 0.168128 GGAATCAAAACGACGGCTGG 59.832 55.000 0.00 0.00 0.00 4.85
4939 7028 0.871722 TGGAATCAAAACGACGGCTG 59.128 50.000 0.00 0.00 0.00 4.85
4940 7029 1.156736 CTGGAATCAAAACGACGGCT 58.843 50.000 0.00 0.00 0.00 5.52
4941 7030 0.168128 CCTGGAATCAAAACGACGGC 59.832 55.000 0.00 0.00 0.00 5.68
4942 7031 0.168128 GCCTGGAATCAAAACGACGG 59.832 55.000 0.00 0.00 0.00 4.79
4943 7032 0.179225 CGCCTGGAATCAAAACGACG 60.179 55.000 0.00 0.00 0.00 5.12
4944 7033 1.153353 TCGCCTGGAATCAAAACGAC 58.847 50.000 0.00 0.00 0.00 4.34
4945 7034 1.885560 TTCGCCTGGAATCAAAACGA 58.114 45.000 0.00 0.00 0.00 3.85
4946 7035 2.031157 ACTTTCGCCTGGAATCAAAACG 60.031 45.455 0.00 0.00 33.85 3.60
4947 7036 3.643159 ACTTTCGCCTGGAATCAAAAC 57.357 42.857 0.00 0.00 33.85 2.43
4948 7037 4.319911 CGTAACTTTCGCCTGGAATCAAAA 60.320 41.667 0.00 0.00 33.85 2.44
4949 7038 3.187637 CGTAACTTTCGCCTGGAATCAAA 59.812 43.478 0.00 0.00 33.85 2.69
4950 7039 2.739913 CGTAACTTTCGCCTGGAATCAA 59.260 45.455 0.00 0.00 33.85 2.57
4951 7040 2.343101 CGTAACTTTCGCCTGGAATCA 58.657 47.619 0.00 0.00 33.85 2.57
4952 7041 1.062148 GCGTAACTTTCGCCTGGAATC 59.938 52.381 0.00 0.00 46.61 2.52
4953 7042 1.084289 GCGTAACTTTCGCCTGGAAT 58.916 50.000 0.00 0.00 46.61 3.01
4954 7043 2.535588 GCGTAACTTTCGCCTGGAA 58.464 52.632 0.00 0.00 46.61 3.53
4955 7044 4.272100 GCGTAACTTTCGCCTGGA 57.728 55.556 0.00 0.00 46.61 3.86
4961 7050 0.457337 AGGCCGTAGCGTAACTTTCG 60.457 55.000 0.00 0.00 41.24 3.46
4962 7051 0.997196 CAGGCCGTAGCGTAACTTTC 59.003 55.000 0.00 0.00 41.24 2.62
4963 7052 0.319405 ACAGGCCGTAGCGTAACTTT 59.681 50.000 0.00 0.00 41.24 2.66
4964 7053 1.176527 TACAGGCCGTAGCGTAACTT 58.823 50.000 0.00 0.00 41.24 2.66
4965 7054 1.176527 TTACAGGCCGTAGCGTAACT 58.823 50.000 0.00 0.00 41.24 2.24
4966 7055 2.214387 ATTACAGGCCGTAGCGTAAC 57.786 50.000 0.00 0.00 41.24 2.50
4967 7056 4.518590 TGTATATTACAGGCCGTAGCGTAA 59.481 41.667 0.00 2.18 34.85 3.18
4968 7057 4.071423 TGTATATTACAGGCCGTAGCGTA 58.929 43.478 0.00 0.00 34.85 4.42
4969 7058 2.886523 TGTATATTACAGGCCGTAGCGT 59.113 45.455 0.00 0.00 34.85 5.07
4970 7059 3.240069 GTGTATATTACAGGCCGTAGCG 58.760 50.000 0.00 0.00 39.77 4.26
4971 7060 3.257624 AGGTGTATATTACAGGCCGTAGC 59.742 47.826 0.00 0.00 39.77 3.58
4972 7061 4.280174 ACAGGTGTATATTACAGGCCGTAG 59.720 45.833 0.00 0.00 39.77 3.51
4973 7062 4.217510 ACAGGTGTATATTACAGGCCGTA 58.782 43.478 0.00 0.00 39.77 4.02
4974 7063 3.036091 ACAGGTGTATATTACAGGCCGT 58.964 45.455 0.00 0.49 39.77 5.68
4975 7064 3.746045 ACAGGTGTATATTACAGGCCG 57.254 47.619 0.00 0.00 39.77 6.13
4976 7065 7.221450 TCATTTACAGGTGTATATTACAGGCC 58.779 38.462 0.00 0.00 39.77 5.19
4977 7066 8.671384 TTCATTTACAGGTGTATATTACAGGC 57.329 34.615 0.00 0.00 39.77 4.85
4982 7071 9.496873 CCGGATTTCATTTACAGGTGTATATTA 57.503 33.333 0.00 0.00 0.00 0.98
4983 7072 8.215050 TCCGGATTTCATTTACAGGTGTATATT 58.785 33.333 0.00 0.00 0.00 1.28
4984 7073 7.660208 GTCCGGATTTCATTTACAGGTGTATAT 59.340 37.037 7.81 0.00 0.00 0.86
4985 7074 6.987992 GTCCGGATTTCATTTACAGGTGTATA 59.012 38.462 7.81 0.00 0.00 1.47
4986 7075 5.820947 GTCCGGATTTCATTTACAGGTGTAT 59.179 40.000 7.81 0.00 0.00 2.29
4987 7076 5.180271 GTCCGGATTTCATTTACAGGTGTA 58.820 41.667 7.81 0.00 0.00 2.90
4988 7077 4.007659 GTCCGGATTTCATTTACAGGTGT 58.992 43.478 7.81 0.00 0.00 4.16
4989 7078 3.063452 CGTCCGGATTTCATTTACAGGTG 59.937 47.826 7.81 0.00 0.00 4.00
4990 7079 3.267483 CGTCCGGATTTCATTTACAGGT 58.733 45.455 7.81 0.00 0.00 4.00
4991 7080 3.267483 ACGTCCGGATTTCATTTACAGG 58.733 45.455 7.81 0.00 0.00 4.00
4992 7081 5.751509 TGATACGTCCGGATTTCATTTACAG 59.248 40.000 7.81 0.00 0.00 2.74
4993 7082 5.662456 TGATACGTCCGGATTTCATTTACA 58.338 37.500 7.81 0.00 0.00 2.41
4994 7083 6.257193 AGTTGATACGTCCGGATTTCATTTAC 59.743 38.462 7.81 4.54 0.00 2.01
4995 7084 6.342906 AGTTGATACGTCCGGATTTCATTTA 58.657 36.000 7.81 0.00 0.00 1.40
4996 7085 5.183228 AGTTGATACGTCCGGATTTCATTT 58.817 37.500 7.81 0.00 0.00 2.32
4997 7086 4.766375 AGTTGATACGTCCGGATTTCATT 58.234 39.130 7.81 0.00 0.00 2.57
4998 7087 4.402056 AGTTGATACGTCCGGATTTCAT 57.598 40.909 7.81 0.00 0.00 2.57
4999 7088 3.880047 AGTTGATACGTCCGGATTTCA 57.120 42.857 7.81 5.95 0.00 2.69
5000 7089 5.104374 TGTAAGTTGATACGTCCGGATTTC 58.896 41.667 7.81 3.08 0.00 2.17
5001 7090 5.075858 TGTAAGTTGATACGTCCGGATTT 57.924 39.130 7.81 0.00 0.00 2.17
5002 7091 4.679662 CTGTAAGTTGATACGTCCGGATT 58.320 43.478 7.81 0.00 0.00 3.01
5003 7092 3.490419 GCTGTAAGTTGATACGTCCGGAT 60.490 47.826 7.81 0.00 35.30 4.18
5004 7093 2.159338 GCTGTAAGTTGATACGTCCGGA 60.159 50.000 0.00 0.00 35.30 5.14
5005 7094 2.190981 GCTGTAAGTTGATACGTCCGG 58.809 52.381 0.00 0.00 35.30 5.14
5006 7095 1.844357 CGCTGTAAGTTGATACGTCCG 59.156 52.381 0.00 0.00 35.30 4.79
5007 7096 3.141002 TCGCTGTAAGTTGATACGTCC 57.859 47.619 0.00 0.00 35.30 4.79
5008 7097 4.206609 GGAATCGCTGTAAGTTGATACGTC 59.793 45.833 0.00 0.00 35.30 4.34
5009 7098 4.110482 GGAATCGCTGTAAGTTGATACGT 58.890 43.478 0.00 0.00 35.30 3.57
5010 7099 4.109766 TGGAATCGCTGTAAGTTGATACG 58.890 43.478 0.00 0.00 35.30 3.06
5011 7100 5.502544 GCTTGGAATCGCTGTAAGTTGATAC 60.503 44.000 0.00 0.00 35.30 2.24
5012 7101 4.570772 GCTTGGAATCGCTGTAAGTTGATA 59.429 41.667 0.00 0.00 35.30 2.15
5013 7102 3.375299 GCTTGGAATCGCTGTAAGTTGAT 59.625 43.478 0.00 0.00 35.30 2.57
5014 7103 2.742053 GCTTGGAATCGCTGTAAGTTGA 59.258 45.455 0.00 0.00 35.30 3.18
5015 7104 2.474526 CGCTTGGAATCGCTGTAAGTTG 60.475 50.000 0.00 0.00 35.30 3.16
5016 7105 1.732259 CGCTTGGAATCGCTGTAAGTT 59.268 47.619 0.00 0.00 35.30 2.66
5017 7106 1.359848 CGCTTGGAATCGCTGTAAGT 58.640 50.000 0.00 0.00 35.30 2.24
5018 7107 0.652592 CCGCTTGGAATCGCTGTAAG 59.347 55.000 0.00 0.00 33.02 2.34
5019 7108 0.742990 CCCGCTTGGAATCGCTGTAA 60.743 55.000 0.00 0.00 35.39 2.41
5020 7109 1.153449 CCCGCTTGGAATCGCTGTA 60.153 57.895 0.00 0.00 35.39 2.74
5021 7110 2.436646 CCCGCTTGGAATCGCTGT 60.437 61.111 0.00 0.00 35.39 4.40
5022 7111 3.204827 CCCCGCTTGGAATCGCTG 61.205 66.667 0.00 0.00 35.39 5.18
5025 7114 2.602746 TTAGGCCCCGCTTGGAATCG 62.603 60.000 0.00 0.00 35.39 3.34
5026 7115 0.819666 CTTAGGCCCCGCTTGGAATC 60.820 60.000 0.00 0.00 35.39 2.52
5027 7116 1.227383 CTTAGGCCCCGCTTGGAAT 59.773 57.895 0.00 0.00 35.39 3.01
5028 7117 1.785353 AACTTAGGCCCCGCTTGGAA 61.785 55.000 0.00 0.00 35.39 3.53
5029 7118 0.910566 TAACTTAGGCCCCGCTTGGA 60.911 55.000 0.00 0.00 35.39 3.53
5030 7119 0.463833 CTAACTTAGGCCCCGCTTGG 60.464 60.000 0.00 0.00 0.00 3.61
5031 7120 0.252197 ACTAACTTAGGCCCCGCTTG 59.748 55.000 0.00 0.00 0.00 4.01
5032 7121 0.989602 AACTAACTTAGGCCCCGCTT 59.010 50.000 0.00 0.00 0.00 4.68
5033 7122 0.989602 AAACTAACTTAGGCCCCGCT 59.010 50.000 0.00 0.00 0.00 5.52
5034 7123 2.283298 GTAAACTAACTTAGGCCCCGC 58.717 52.381 0.00 0.00 0.00 6.13
5035 7124 3.615224 TGTAAACTAACTTAGGCCCCG 57.385 47.619 0.00 0.00 0.00 5.73
5036 7125 6.037500 CGTATTTGTAAACTAACTTAGGCCCC 59.962 42.308 0.00 0.00 0.00 5.80
5037 7126 6.457392 GCGTATTTGTAAACTAACTTAGGCCC 60.457 42.308 0.00 0.00 0.00 5.80
5038 7127 6.481134 GCGTATTTGTAAACTAACTTAGGCC 58.519 40.000 0.00 0.00 0.00 5.19
5039 7128 6.180567 CGCGTATTTGTAAACTAACTTAGGC 58.819 40.000 0.00 0.00 0.00 3.93
5058 7147 3.254060 ACTAGACTAAAGACGACGCGTA 58.746 45.455 13.97 0.00 41.37 4.42
5061 7150 2.677337 AGGACTAGACTAAAGACGACGC 59.323 50.000 0.00 0.00 0.00 5.19
5132 7224 6.715464 TGACTGAAGCTAAAAACTTTTCTCG 58.285 36.000 0.00 0.00 0.00 4.04
5156 7248 7.686859 GCAACAGGTTAGAGGAAGGAAAATTTT 60.687 37.037 2.28 2.28 0.00 1.82
5158 7250 5.243954 GCAACAGGTTAGAGGAAGGAAAATT 59.756 40.000 0.00 0.00 0.00 1.82
5159 7251 4.767409 GCAACAGGTTAGAGGAAGGAAAAT 59.233 41.667 0.00 0.00 0.00 1.82
5167 7259 2.828520 CAGAGAGCAACAGGTTAGAGGA 59.171 50.000 0.00 0.00 0.00 3.71
5209 7301 2.193536 GCCTTTGAACGTGGGCTGT 61.194 57.895 0.00 0.00 41.20 4.40
5218 7310 3.807622 TGGATCGATTATCGCCTTTGAAC 59.192 43.478 10.02 0.00 40.21 3.18
5225 7317 5.856126 TGTTAATTGGATCGATTATCGCC 57.144 39.130 10.02 7.01 40.21 5.54
5232 7324 4.698304 ACCGTGTTTGTTAATTGGATCGAT 59.302 37.500 0.00 0.00 0.00 3.59
5282 7374 2.061061 CTCTGCCTATTTGATCCCCCT 58.939 52.381 0.00 0.00 0.00 4.79
5335 7544 2.343246 CACGCACGAACGTATGTTACAT 59.657 45.455 2.58 2.58 46.34 2.29
5336 7545 1.714990 CACGCACGAACGTATGTTACA 59.285 47.619 0.00 0.00 46.34 2.41
5337 7546 1.523600 GCACGCACGAACGTATGTTAC 60.524 52.381 0.00 0.00 46.34 2.50
5338 7547 0.709467 GCACGCACGAACGTATGTTA 59.291 50.000 0.00 0.00 46.34 2.41
5340 7549 2.377310 GGCACGCACGAACGTATGT 61.377 57.895 7.13 0.00 46.34 2.29
5341 7550 0.799152 TAGGCACGCACGAACGTATG 60.799 55.000 7.13 0.91 46.34 2.39
5345 7554 2.092291 ACATAGGCACGCACGAACG 61.092 57.895 0.00 0.00 39.50 3.95
5419 7628 0.595567 TAACAGACACACGGACACGC 60.596 55.000 0.00 0.00 46.04 5.34
5421 7630 2.538449 CAGTTAACAGACACACGGACAC 59.462 50.000 8.61 0.00 0.00 3.67
5427 7636 3.849645 GCATGTGCAGTTAACAGACACAC 60.850 47.826 22.56 15.62 43.39 3.82
5434 7643 2.325218 TGCGCATGTGCAGTTAACA 58.675 47.368 29.26 5.40 40.62 2.41
5453 7677 3.084786 ACATCTCTCTCGATCACACACA 58.915 45.455 0.00 0.00 0.00 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.