Multiple sequence alignment - TraesCS7D01G480000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G480000 chr7D 100.000 3835 0 0 1 3835 591004210 591008044 0.000000e+00 7083.0
1 TraesCS7D01G480000 chr7D 91.975 486 24 3 1622 2106 591013987 591014458 0.000000e+00 667.0
2 TraesCS7D01G480000 chr7D 86.932 528 32 14 2123 2648 591016001 591016493 3.350000e-155 558.0
3 TraesCS7D01G480000 chr7D 84.843 574 51 12 2780 3347 591093946 591094489 2.610000e-151 545.0
4 TraesCS7D01G480000 chr7D 85.887 496 50 6 2779 3268 591074030 591074511 9.500000e-141 510.0
5 TraesCS7D01G480000 chr7D 89.362 141 11 3 2648 2785 591091418 591091557 1.420000e-39 174.0
6 TraesCS7D01G480000 chr7D 89.362 141 11 3 2648 2785 591092195 591092334 1.420000e-39 174.0
7 TraesCS7D01G480000 chr7D 88.652 141 12 3 2648 2785 591090679 591090818 6.590000e-38 169.0
8 TraesCS7D01G480000 chr7D 88.571 140 12 3 2648 2784 591072052 591072190 2.370000e-37 167.0
9 TraesCS7D01G480000 chr7B 88.180 1709 137 43 1670 3344 666503704 666505381 0.000000e+00 1977.0
10 TraesCS7D01G480000 chr7B 88.993 1490 108 35 1670 3128 666551071 666552535 0.000000e+00 1792.0
11 TraesCS7D01G480000 chr7B 86.545 825 69 25 780 1575 666502860 666503671 0.000000e+00 870.0
12 TraesCS7D01G480000 chr7B 92.979 527 28 8 1 527 666501700 666502217 0.000000e+00 760.0
13 TraesCS7D01G480000 chr7B 96.753 154 2 3 3684 3835 666510427 666510579 1.770000e-63 254.0
14 TraesCS7D01G480000 chr7B 89.375 160 10 4 3483 3636 666505436 666505594 1.090000e-45 195.0
15 TraesCS7D01G480000 chr7B 92.437 119 8 1 519 636 666502429 666502547 6.590000e-38 169.0
16 TraesCS7D01G480000 chr7B 90.909 77 4 3 657 732 666502690 666502764 2.440000e-17 100.0
17 TraesCS7D01G480000 chr7B 94.872 39 2 0 3763 3801 666505594 666505632 1.150000e-05 62.1
18 TraesCS7D01G480000 chr4B 89.873 395 34 3 1565 1956 219273606 219273215 1.590000e-138 503.0
19 TraesCS7D01G480000 chr2B 88.861 395 37 4 1565 1956 320514994 320514604 2.680000e-131 479.0
20 TraesCS7D01G480000 chr5D 91.061 358 23 6 1603 1956 481667145 481666793 3.470000e-130 475.0
21 TraesCS7D01G480000 chr5B 89.071 366 34 3 1594 1956 37322182 37322544 2.100000e-122 449.0
22 TraesCS7D01G480000 chr5B 95.000 120 6 0 1150 1269 624163609 624163490 5.060000e-44 189.0
23 TraesCS7D01G480000 chr5B 95.000 120 6 0 1150 1269 627763540 627763421 5.060000e-44 189.0
24 TraesCS7D01G480000 chr5B 94.167 120 7 0 1150 1269 325637549 325637430 2.350000e-42 183.0
25 TraesCS7D01G480000 chr5A 89.489 352 29 5 1603 1950 486769200 486768853 4.550000e-119 438.0
26 TraesCS7D01G480000 chr5A 87.089 395 42 5 1565 1956 699209135 699209523 4.550000e-119 438.0
27 TraesCS7D01G480000 chr1D 84.392 378 33 15 986 1353 94414766 94415127 7.890000e-92 348.0
28 TraesCS7D01G480000 chr1D 94.245 139 7 1 1150 1287 403563414 403563552 1.080000e-50 211.0
29 TraesCS7D01G480000 chr1A 95.833 120 5 0 1150 1269 498809556 498809675 1.090000e-45 195.0
30 TraesCS7D01G480000 chr1B 91.367 139 11 1 1150 1287 542929291 542929429 5.060000e-44 189.0
31 TraesCS7D01G480000 chr7A 94.167 120 7 0 1150 1269 704398921 704398802 2.350000e-42 183.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G480000 chr7D 591004210 591008044 3834 False 7083.000000 7083 100.000000 1 3835 1 chr7D.!!$F1 3834
1 TraesCS7D01G480000 chr7D 591013987 591016493 2506 False 612.500000 667 89.453500 1622 2648 2 chr7D.!!$F2 1026
2 TraesCS7D01G480000 chr7D 591072052 591074511 2459 False 338.500000 510 87.229000 2648 3268 2 chr7D.!!$F3 620
3 TraesCS7D01G480000 chr7D 591090679 591094489 3810 False 265.500000 545 88.054750 2648 3347 4 chr7D.!!$F4 699
4 TraesCS7D01G480000 chr7B 666551071 666552535 1464 False 1792.000000 1792 88.993000 1670 3128 1 chr7B.!!$F2 1458
5 TraesCS7D01G480000 chr7B 666501700 666505632 3932 False 590.442857 1977 90.756714 1 3801 7 chr7B.!!$F3 3800

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
236 237 0.251165 CCGAGGATTGTGGGGTTGTT 60.251 55.0 0.0 0.0 0.00 2.83 F
1363 1774 0.039617 TTCGTTTGCTGAAATGCGGG 60.040 50.0 0.0 0.0 35.36 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1387 1812 0.035458 ACTCTACACAACAGCCAGGC 59.965 55.0 1.84 1.84 0.0 4.85 R
3063 8428 0.036010 CCGTTTCACTGGAGGAGCAT 60.036 55.0 0.00 0.00 0.0 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 9.278734 GAGAGCATTAACAATTAACTTACTTGC 57.721 33.333 0.05 0.00 0.00 4.01
70 71 9.927668 AGCATTAACAATTAACTTACTTGCATT 57.072 25.926 0.00 0.00 30.22 3.56
71 72 9.956797 GCATTAACAATTAACTTACTTGCATTG 57.043 29.630 0.00 0.00 0.00 2.82
134 135 8.751335 CATTAATATAACAAAAATCACCGTGCC 58.249 33.333 0.00 0.00 0.00 5.01
232 233 3.728373 GGCCGAGGATTGTGGGGT 61.728 66.667 0.00 0.00 0.00 4.95
236 237 0.251165 CCGAGGATTGTGGGGTTGTT 60.251 55.000 0.00 0.00 0.00 2.83
274 275 2.228822 AGAAAATGTTGCCGTGGATGAC 59.771 45.455 0.00 0.00 0.00 3.06
403 404 4.518970 TGGGAAGATGCAAAAGTAGTGTTC 59.481 41.667 0.00 0.00 0.00 3.18
404 405 4.762251 GGGAAGATGCAAAAGTAGTGTTCT 59.238 41.667 0.00 0.00 0.00 3.01
405 406 5.335191 GGGAAGATGCAAAAGTAGTGTTCTG 60.335 44.000 0.00 0.00 0.00 3.02
410 411 8.480643 AGATGCAAAAGTAGTGTTCTGTATAC 57.519 34.615 0.00 0.00 0.00 1.47
413 414 6.987404 TGCAAAAGTAGTGTTCTGTATACACA 59.013 34.615 0.08 0.00 46.42 3.72
435 436 9.874205 ACACATAACATGCTTAAATGCTTAAAT 57.126 25.926 0.00 0.00 0.00 1.40
437 438 8.819974 ACATAACATGCTTAAATGCTTAAATGC 58.180 29.630 0.00 0.00 0.00 3.56
438 439 9.037737 CATAACATGCTTAAATGCTTAAATGCT 57.962 29.630 0.00 0.00 0.00 3.79
439 440 7.910441 AACATGCTTAAATGCTTAAATGCTT 57.090 28.000 0.00 0.00 0.00 3.91
449 450 7.591006 AATGCTTAAATGCTTTCATCACAAG 57.409 32.000 0.00 0.00 31.27 3.16
493 494 2.095853 GCTGGATGTGTTTATGGACGTG 59.904 50.000 0.00 0.00 0.00 4.49
500 501 6.293516 GGATGTGTTTATGGACGTGTTTTACA 60.294 38.462 0.00 0.00 0.00 2.41
501 502 6.621316 TGTGTTTATGGACGTGTTTTACAT 57.379 33.333 0.00 0.00 0.00 2.29
513 514 8.928733 GGACGTGTTTTACATGAGTAATTAGAA 58.071 33.333 0.00 0.00 39.78 2.10
536 757 2.884639 ACAAAACTTCCTCATCCAACGG 59.115 45.455 0.00 0.00 0.00 4.44
545 766 2.874701 CCTCATCCAACGGCAAAGATAG 59.125 50.000 0.00 0.00 0.00 2.08
553 774 1.227973 GGCAAAGATAGGGCTCGGG 60.228 63.158 0.00 0.00 0.00 5.14
618 839 3.058016 ACTCGCAACATGACAAATCAAGG 60.058 43.478 0.00 0.00 38.69 3.61
626 847 2.212900 GACAAATCAAGGCCACCCGC 62.213 60.000 5.01 0.00 35.76 6.13
691 1034 1.933853 GGTGTTGTCATCGCCACTATC 59.066 52.381 8.37 0.00 35.75 2.08
706 1049 4.825422 CCACTATCTCTGCAGAACTTTGA 58.175 43.478 18.85 11.43 30.24 2.69
715 1058 6.319658 TCTCTGCAGAACTTTGAAATGAAACT 59.680 34.615 18.85 0.00 0.00 2.66
717 1060 6.753279 TCTGCAGAACTTTGAAATGAAACTTG 59.247 34.615 15.67 0.00 0.00 3.16
718 1061 5.291614 TGCAGAACTTTGAAATGAAACTTGC 59.708 36.000 0.00 0.00 0.00 4.01
719 1062 5.291614 GCAGAACTTTGAAATGAAACTTGCA 59.708 36.000 0.00 0.00 0.00 4.08
721 1064 7.169645 GCAGAACTTTGAAATGAAACTTGCATA 59.830 33.333 0.00 0.00 0.00 3.14
723 1066 9.415544 AGAACTTTGAAATGAAACTTGCATATC 57.584 29.630 0.00 0.00 0.00 1.63
753 1096 8.761575 TTTTGAGAATGAAACCTGCATATTTC 57.238 30.769 13.37 13.37 35.73 2.17
754 1097 6.122850 TGAGAATGAAACCTGCATATTTCG 57.877 37.500 14.65 0.00 37.59 3.46
755 1098 5.066375 TGAGAATGAAACCTGCATATTTCGG 59.934 40.000 14.65 2.69 37.59 4.30
756 1099 5.192927 AGAATGAAACCTGCATATTTCGGA 58.807 37.500 14.65 3.12 37.59 4.55
757 1100 4.900635 ATGAAACCTGCATATTTCGGAC 57.099 40.909 14.65 0.00 37.59 4.79
759 1102 3.689161 TGAAACCTGCATATTTCGGACTG 59.311 43.478 14.65 0.00 37.59 3.51
770 1142 2.833631 TTCGGACTGGAGAGAAAACC 57.166 50.000 0.00 0.00 0.00 3.27
783 1155 2.801111 GAGAAAACCGTTGTCCTGAGTC 59.199 50.000 0.00 0.00 0.00 3.36
786 1158 2.432628 CCGTTGTCCTGAGTCGGC 60.433 66.667 0.00 0.00 35.01 5.54
814 1206 0.323087 TGAATCGGTCTGGTCGAGGA 60.323 55.000 0.00 0.00 40.09 3.71
824 1216 2.266055 GTCGAGGACCAGCAAGGG 59.734 66.667 0.00 0.00 43.89 3.95
874 1266 0.513820 ACCACGTAATTTCAACCGCG 59.486 50.000 0.00 0.00 0.00 6.46
899 1291 3.363627 CCGAACCCTATATACTCCCTCC 58.636 54.545 0.00 0.00 0.00 4.30
942 1334 4.426313 CCCCCGAAGAAGCCACCC 62.426 72.222 0.00 0.00 0.00 4.61
943 1335 4.778143 CCCCGAAGAAGCCACCCG 62.778 72.222 0.00 0.00 0.00 5.28
967 1359 4.150454 CCGCCTCCTCCTCCTCCT 62.150 72.222 0.00 0.00 0.00 3.69
968 1360 2.042435 CGCCTCCTCCTCCTCCTT 60.042 66.667 0.00 0.00 0.00 3.36
969 1361 2.430610 CGCCTCCTCCTCCTCCTTG 61.431 68.421 0.00 0.00 0.00 3.61
971 1363 1.306482 CCTCCTCCTCCTCCTTGCA 60.306 63.158 0.00 0.00 0.00 4.08
1039 1439 2.283388 TACGAACCGCACCCCTCT 60.283 61.111 0.00 0.00 0.00 3.69
1047 1447 4.741239 GCACCCCTCTCCCTCCCA 62.741 72.222 0.00 0.00 0.00 4.37
1053 1453 2.041405 CTCTCCCTCCCACTCCCC 60.041 72.222 0.00 0.00 0.00 4.81
1055 1455 3.700350 CTCCCTCCCACTCCCCCT 61.700 72.222 0.00 0.00 0.00 4.79
1058 1458 4.825679 CCTCCCACTCCCCCTCCC 62.826 77.778 0.00 0.00 0.00 4.30
1089 1499 1.667154 CCGAGCTGATTCTGTCCCGA 61.667 60.000 0.00 0.00 0.00 5.14
1092 1502 0.534412 AGCTGATTCTGTCCCGAGTG 59.466 55.000 0.00 0.00 0.00 3.51
1094 1504 0.460987 CTGATTCTGTCCCGAGTGGC 60.461 60.000 0.00 0.00 0.00 5.01
1097 1507 1.194781 ATTCTGTCCCGAGTGGCTGT 61.195 55.000 0.00 0.00 0.00 4.40
1099 1509 2.842462 TGTCCCGAGTGGCTGTGT 60.842 61.111 0.00 0.00 0.00 3.72
1103 1513 2.639286 CCGAGTGGCTGTGTTTGC 59.361 61.111 0.00 0.00 0.00 3.68
1104 1514 2.249309 CGAGTGGCTGTGTTTGCG 59.751 61.111 0.00 0.00 0.00 4.85
1106 1516 3.542629 GAGTGGCTGTGTTTGCGGC 62.543 63.158 0.00 0.00 39.88 6.53
1107 1517 3.595758 GTGGCTGTGTTTGCGGCT 61.596 61.111 0.00 0.00 40.42 5.52
1108 1518 3.594775 TGGCTGTGTTTGCGGCTG 61.595 61.111 0.00 0.00 40.42 4.85
1110 1520 2.353839 GCTGTGTTTGCGGCTGTG 60.354 61.111 0.00 0.00 37.74 3.66
1111 1521 2.332514 CTGTGTTTGCGGCTGTGG 59.667 61.111 0.00 0.00 0.00 4.17
1112 1522 2.439338 TGTGTTTGCGGCTGTGGT 60.439 55.556 0.00 0.00 0.00 4.16
1113 1523 2.331451 GTGTTTGCGGCTGTGGTC 59.669 61.111 0.00 0.00 0.00 4.02
1114 1524 3.276091 TGTTTGCGGCTGTGGTCG 61.276 61.111 0.00 0.00 44.16 4.79
1147 1557 2.933495 TTCGATTCGATTCCGACTGT 57.067 45.000 9.96 0.00 45.50 3.55
1148 1558 2.188837 TCGATTCGATTCCGACTGTG 57.811 50.000 4.29 0.00 45.50 3.66
1149 1559 1.471287 TCGATTCGATTCCGACTGTGT 59.529 47.619 4.29 0.00 45.50 3.72
1150 1560 1.583856 CGATTCGATTCCGACTGTGTG 59.416 52.381 0.00 0.00 45.50 3.82
1274 1684 3.756963 CTCCAAGGGTATGTATCGATCGA 59.243 47.826 21.86 21.86 0.00 3.59
1287 1697 2.683968 TCGATCGACCCTCTGTTTTTG 58.316 47.619 15.15 0.00 0.00 2.44
1294 1704 0.041312 CCCTCTGTTTTTGTCACGCG 60.041 55.000 3.53 3.53 0.00 6.01
1295 1705 0.655733 CCTCTGTTTTTGTCACGCGT 59.344 50.000 5.58 5.58 0.00 6.01
1329 1739 1.141019 CCGATCCGACGTGGTGAAT 59.859 57.895 0.00 0.00 39.52 2.57
1332 1742 1.429148 GATCCGACGTGGTGAATGGC 61.429 60.000 0.00 0.00 39.52 4.40
1339 1749 0.802494 CGTGGTGAATGGCTGGTTAC 59.198 55.000 0.00 0.00 0.00 2.50
1355 1766 0.106335 TTACCCCGTTCGTTTGCTGA 59.894 50.000 0.00 0.00 0.00 4.26
1357 1768 0.748729 ACCCCGTTCGTTTGCTGAAA 60.749 50.000 0.00 0.00 0.00 2.69
1358 1769 0.596082 CCCCGTTCGTTTGCTGAAAT 59.404 50.000 0.00 0.00 0.00 2.17
1359 1770 1.665735 CCCCGTTCGTTTGCTGAAATG 60.666 52.381 0.00 0.00 0.00 2.32
1360 1771 1.052287 CCGTTCGTTTGCTGAAATGC 58.948 50.000 0.00 0.00 0.00 3.56
1361 1772 0.697010 CGTTCGTTTGCTGAAATGCG 59.303 50.000 0.00 0.00 35.36 4.73
1363 1774 0.039617 TTCGTTTGCTGAAATGCGGG 60.040 50.000 0.00 0.00 35.36 6.13
1364 1775 1.444212 CGTTTGCTGAAATGCGGGG 60.444 57.895 0.00 0.00 35.36 5.73
1365 1776 1.665442 GTTTGCTGAAATGCGGGGT 59.335 52.632 0.00 0.00 35.36 4.95
1367 1778 0.825425 TTTGCTGAAATGCGGGGTCA 60.825 50.000 0.00 0.00 35.36 4.02
1368 1779 0.825425 TTGCTGAAATGCGGGGTCAA 60.825 50.000 0.00 0.00 35.36 3.18
1369 1780 0.611618 TGCTGAAATGCGGGGTCAAT 60.612 50.000 0.00 0.00 35.36 2.57
1385 1810 1.827344 TCAATCGGCTCACAGATCTGT 59.173 47.619 22.89 22.89 46.17 3.41
1401 1826 2.519302 GTGGCCTGGCTGTTGTGT 60.519 61.111 19.68 0.00 0.00 3.72
1409 1834 1.344438 CTGGCTGTTGTGTAGAGTGGA 59.656 52.381 0.00 0.00 0.00 4.02
1412 1837 1.001406 GCTGTTGTGTAGAGTGGAGCT 59.999 52.381 0.00 0.00 0.00 4.09
1413 1838 2.681706 CTGTTGTGTAGAGTGGAGCTG 58.318 52.381 0.00 0.00 0.00 4.24
1416 1841 2.802816 GTTGTGTAGAGTGGAGCTGTTG 59.197 50.000 0.00 0.00 0.00 3.33
1417 1842 2.316108 TGTGTAGAGTGGAGCTGTTGA 58.684 47.619 0.00 0.00 0.00 3.18
1428 1853 1.873591 GAGCTGTTGATGGTTGTCGTT 59.126 47.619 0.00 0.00 0.00 3.85
1431 1856 2.858260 GCTGTTGATGGTTGTCGTTTGG 60.858 50.000 0.00 0.00 0.00 3.28
1454 1879 2.254546 TTTGTGTCTGGAACTGCGAT 57.745 45.000 0.00 0.00 0.00 4.58
1455 1880 2.254546 TTGTGTCTGGAACTGCGATT 57.745 45.000 0.00 0.00 0.00 3.34
1467 1892 3.314541 ACTGCGATTCCGTTAGAAGTT 57.685 42.857 0.00 0.00 38.07 2.66
1502 1927 8.256356 AGCTCTACATAGATTGTTTGTAGGAT 57.744 34.615 10.20 0.71 41.90 3.24
1511 1936 5.653769 AGATTGTTTGTAGGATGGTCAATGG 59.346 40.000 0.00 0.00 0.00 3.16
1517 1942 0.260816 AGGATGGTCAATGGCATGCT 59.739 50.000 18.92 0.00 0.00 3.79
1524 1949 2.223735 GGTCAATGGCATGCTCTGAATG 60.224 50.000 18.92 8.63 0.00 2.67
1526 1951 3.093814 TCAATGGCATGCTCTGAATGTT 58.906 40.909 18.92 0.00 0.00 2.71
1530 1955 1.952296 GGCATGCTCTGAATGTTAGGG 59.048 52.381 18.92 0.00 0.00 3.53
1537 1962 3.559171 GCTCTGAATGTTAGGGTGGTCAA 60.559 47.826 0.00 0.00 0.00 3.18
1538 1963 4.848357 CTCTGAATGTTAGGGTGGTCAAT 58.152 43.478 0.00 0.00 0.00 2.57
1539 1964 4.588899 TCTGAATGTTAGGGTGGTCAATG 58.411 43.478 0.00 0.00 0.00 2.82
1540 1965 3.088532 TGAATGTTAGGGTGGTCAATGC 58.911 45.455 0.00 0.00 0.00 3.56
1541 1966 2.143876 ATGTTAGGGTGGTCAATGCC 57.856 50.000 0.00 0.00 0.00 4.40
1542 1967 0.774276 TGTTAGGGTGGTCAATGCCA 59.226 50.000 0.00 0.00 35.93 4.92
1543 1968 1.357420 TGTTAGGGTGGTCAATGCCAT 59.643 47.619 0.18 0.00 41.08 4.40
1544 1969 1.750778 GTTAGGGTGGTCAATGCCATG 59.249 52.381 0.18 0.00 41.08 3.66
1545 1970 0.395586 TAGGGTGGTCAATGCCATGC 60.396 55.000 0.18 0.00 41.08 4.06
1546 1971 2.724273 GGGTGGTCAATGCCATGCC 61.724 63.158 0.18 0.00 41.08 4.40
1547 1972 2.491152 GTGGTCAATGCCATGCCG 59.509 61.111 0.18 0.00 41.08 5.69
1548 1973 2.045708 GTGGTCAATGCCATGCCGA 61.046 57.895 0.18 0.00 41.08 5.54
1549 1974 1.076850 TGGTCAATGCCATGCCGAT 60.077 52.632 0.00 0.00 32.81 4.18
1550 1975 0.683828 TGGTCAATGCCATGCCGATT 60.684 50.000 0.00 0.00 32.81 3.34
1551 1976 0.461135 GGTCAATGCCATGCCGATTT 59.539 50.000 0.00 0.00 0.00 2.17
1552 1977 1.563111 GTCAATGCCATGCCGATTTG 58.437 50.000 0.00 0.00 0.00 2.32
1553 1978 0.460722 TCAATGCCATGCCGATTTGG 59.539 50.000 0.00 0.00 42.50 3.28
1554 1979 0.460722 CAATGCCATGCCGATTTGGA 59.539 50.000 0.00 0.00 42.00 3.53
1555 1980 0.748450 AATGCCATGCCGATTTGGAG 59.252 50.000 0.00 0.00 42.00 3.86
1556 1981 1.741327 ATGCCATGCCGATTTGGAGC 61.741 55.000 0.00 0.00 42.00 4.70
1557 1982 2.123428 GCCATGCCGATTTGGAGCT 61.123 57.895 0.00 0.00 42.00 4.09
1558 1983 1.669999 GCCATGCCGATTTGGAGCTT 61.670 55.000 0.00 0.00 42.00 3.74
1559 1984 1.679139 CCATGCCGATTTGGAGCTTA 58.321 50.000 0.00 0.00 42.00 3.09
1560 1985 2.023673 CCATGCCGATTTGGAGCTTAA 58.976 47.619 0.00 0.00 42.00 1.85
1561 1986 2.624838 CCATGCCGATTTGGAGCTTAAT 59.375 45.455 0.00 0.00 42.00 1.40
1562 1987 3.068590 CCATGCCGATTTGGAGCTTAATT 59.931 43.478 0.00 0.00 42.00 1.40
1563 1988 4.278170 CCATGCCGATTTGGAGCTTAATTA 59.722 41.667 0.00 0.00 42.00 1.40
1564 1989 4.893424 TGCCGATTTGGAGCTTAATTAC 57.107 40.909 0.00 0.00 42.00 1.89
1565 1990 4.265893 TGCCGATTTGGAGCTTAATTACA 58.734 39.130 0.00 0.00 42.00 2.41
1579 2004 5.528043 TTAATTACAATGCCATGCCGATT 57.472 34.783 0.00 0.00 0.00 3.34
1582 2007 0.176219 ACAATGCCATGCCGATTTGG 59.824 50.000 0.00 0.00 42.50 3.28
1585 2010 1.741327 ATGCCATGCCGATTTGGAGC 61.741 55.000 0.00 0.00 42.00 4.70
1587 2012 1.669999 GCCATGCCGATTTGGAGCTT 61.670 55.000 0.00 0.00 42.00 3.74
1606 2031 4.891756 AGCTTAATTACAATGCCATGCTCT 59.108 37.500 0.00 0.00 0.00 4.09
1608 2033 5.221106 GCTTAATTACAATGCCATGCTCTGA 60.221 40.000 0.00 0.00 0.00 3.27
1614 2039 3.186909 CAATGCCATGCTCTGAATGTTG 58.813 45.455 0.00 0.00 0.00 3.33
1620 2045 2.133281 TGCTCTGAATGTTGGGATGG 57.867 50.000 0.00 0.00 0.00 3.51
1633 2058 1.312815 GGGATGGTCAATGCAGTAGC 58.687 55.000 0.00 0.00 42.57 3.58
1635 2060 1.133976 GGATGGTCAATGCAGTAGCCT 60.134 52.381 7.51 0.00 41.13 4.58
1667 2092 4.342665 GTGTAGGGTTTTGGATTGGAAACA 59.657 41.667 0.00 0.00 37.46 2.83
1681 2106 5.975693 TTGGAAACAGAGTGTGAAGTTTT 57.024 34.783 0.00 0.00 44.54 2.43
1696 2121 1.889170 AGTTTTGCTCTTAGGCTTGCC 59.111 47.619 2.97 2.97 0.00 4.52
1736 2163 5.864418 AATTGATGAATGTAGCTGCCATT 57.136 34.783 11.85 11.85 35.30 3.16
1760 2187 6.897706 TTCTGATTGATCCAAAATGTCACA 57.102 33.333 0.00 0.00 0.00 3.58
1795 2222 4.154015 GCAATGGGAGGTTAAAATGTTTGC 59.846 41.667 0.00 0.00 0.00 3.68
1853 2280 8.700722 TGTATTGTTTGTATGGAATTTGCATC 57.299 30.769 6.67 0.90 29.08 3.91
1956 2395 5.355350 CCAGCCTCTTTATTAACACTTCCAG 59.645 44.000 0.00 0.00 0.00 3.86
2010 2449 5.185056 GGTTGGGATACTTGTATTTTGCTGT 59.815 40.000 0.00 0.00 0.00 4.40
2039 2479 2.884012 TCCCACTGTTGTGTAGCAATTG 59.116 45.455 0.00 0.00 42.34 2.32
2106 2546 6.127479 GGAATTTGTAGGTGGATTGTGCATTA 60.127 38.462 0.00 0.00 0.00 1.90
2109 2549 4.917385 TGTAGGTGGATTGTGCATTAGTT 58.083 39.130 0.00 0.00 0.00 2.24
2111 2551 3.356290 AGGTGGATTGTGCATTAGTTCC 58.644 45.455 0.00 0.00 0.00 3.62
2112 2552 2.427095 GGTGGATTGTGCATTAGTTCCC 59.573 50.000 0.00 0.00 0.00 3.97
2114 2554 3.088532 TGGATTGTGCATTAGTTCCCAC 58.911 45.455 0.00 0.00 0.00 4.61
2115 2555 2.427095 GGATTGTGCATTAGTTCCCACC 59.573 50.000 0.00 0.00 0.00 4.61
2116 2556 2.969821 TTGTGCATTAGTTCCCACCT 57.030 45.000 0.00 0.00 0.00 4.00
2117 2557 2.489938 TGTGCATTAGTTCCCACCTC 57.510 50.000 0.00 0.00 0.00 3.85
2118 2558 1.985159 TGTGCATTAGTTCCCACCTCT 59.015 47.619 0.00 0.00 0.00 3.69
2119 2559 2.375174 TGTGCATTAGTTCCCACCTCTT 59.625 45.455 0.00 0.00 0.00 2.85
2121 2561 3.191371 GTGCATTAGTTCCCACCTCTTTG 59.809 47.826 0.00 0.00 0.00 2.77
2147 4113 2.094545 GCAGTTTGGTGCTTCCTTATGG 60.095 50.000 0.00 0.00 40.54 2.74
2156 4122 1.065126 GCTTCCTTATGGTCCAGCACT 60.065 52.381 0.00 0.00 34.43 4.40
2175 4141 7.015292 CCAGCACTATTCTAATCCAGTAGGTAA 59.985 40.741 0.00 0.00 35.89 2.85
2190 4157 4.850386 AGTAGGTAACCCCAAAGAGATGTT 59.150 41.667 0.00 0.00 34.66 2.71
2198 4165 6.901081 ACCCCAAAGAGATGTTTAAGAAAG 57.099 37.500 0.00 0.00 0.00 2.62
2200 4167 5.775195 CCCCAAAGAGATGTTTAAGAAAGGT 59.225 40.000 0.00 0.00 0.00 3.50
2205 4186 6.688073 AGAGATGTTTAAGAAAGGTGGAGA 57.312 37.500 0.00 0.00 0.00 3.71
2209 4190 7.108847 AGATGTTTAAGAAAGGTGGAGATCTG 58.891 38.462 0.00 0.00 0.00 2.90
2226 4207 9.388506 TGGAGATCTGATTTTAGATTTTCAGAC 57.611 33.333 0.00 0.16 45.22 3.51
2246 4229 2.427453 ACTAGACCACGTTCAGGCTATG 59.573 50.000 0.00 0.00 0.00 2.23
2361 4346 9.908152 TGGACTCGTATTATATTGTATTGACTG 57.092 33.333 0.00 0.00 0.00 3.51
2378 4365 4.140536 TGACTGTTATTTGACATGTGGCA 58.859 39.130 1.15 0.00 0.00 4.92
2550 4542 9.807921 TTATTTGATCCTAGTCTGAAACCTTTT 57.192 29.630 0.00 0.00 0.00 2.27
2568 4560 6.872920 ACCTTTTCTCAATGCTTGTTTAACA 58.127 32.000 0.00 0.00 0.00 2.41
2574 4566 7.197071 TCTCAATGCTTGTTTAACATACGTT 57.803 32.000 0.00 0.00 39.24 3.99
2622 4617 0.667993 TTGCGGCCTAATGCTAATGC 59.332 50.000 0.00 0.00 40.92 3.56
2666 4661 1.742761 ATGTGGATCTTGGAACTGCG 58.257 50.000 0.00 0.00 0.00 5.18
2735 4730 4.336153 GGTTCGTCCCTGTTAAACTCAAAA 59.664 41.667 0.00 0.00 0.00 2.44
2741 4736 6.183360 CGTCCCTGTTAAACTCAAAACTCTTT 60.183 38.462 0.00 0.00 0.00 2.52
2743 4738 5.748630 CCCTGTTAAACTCAAAACTCTTTGC 59.251 40.000 0.00 0.00 41.53 3.68
2750 4745 7.529880 AAACTCAAAACTCTTTGCTCATTTG 57.470 32.000 0.00 0.00 41.53 2.32
2760 4755 2.350899 TGCTCATTTGTCATTTGCCG 57.649 45.000 0.00 0.00 0.00 5.69
2761 4756 1.067706 TGCTCATTTGTCATTTGCCGG 60.068 47.619 0.00 0.00 0.00 6.13
2762 4757 1.202114 GCTCATTTGTCATTTGCCGGA 59.798 47.619 5.05 0.00 0.00 5.14
2763 4758 2.733227 GCTCATTTGTCATTTGCCGGAG 60.733 50.000 5.05 0.00 0.00 4.63
2894 8253 1.272769 GGAGAGTCGTGCTTACAAGGT 59.727 52.381 0.00 0.00 0.00 3.50
2908 8269 1.682684 AAGGTCGATGGCCGTCTCT 60.683 57.895 22.53 13.71 39.75 3.10
2909 8270 1.668101 AAGGTCGATGGCCGTCTCTC 61.668 60.000 22.53 11.90 39.75 3.20
2951 8312 4.493872 CCAAATGCAGTTTCAAACCAAACG 60.494 41.667 0.00 0.00 40.60 3.60
3013 8377 8.183104 TGATGAGATGTTTATTCCTATCGTCT 57.817 34.615 0.00 0.00 0.00 4.18
3063 8428 5.359576 AGTTCTGTCAACATTGTTTTGCCTA 59.640 36.000 0.00 0.00 0.00 3.93
3072 8438 2.128771 TGTTTTGCCTATGCTCCTCC 57.871 50.000 0.00 0.00 38.71 4.30
3088 8454 3.170717 TCCTCCAGTGAAACGGAACTAT 58.829 45.455 0.00 0.00 45.86 2.12
3099 8465 8.027771 AGTGAAACGGAACTATAACAACTAGAG 58.972 37.037 0.00 0.00 45.86 2.43
3101 8467 8.362639 TGAAACGGAACTATAACAACTAGAGTT 58.637 33.333 0.00 3.61 43.26 3.01
3136 8505 1.302192 GCGTGAAACTGGCTGGGTA 60.302 57.895 0.00 0.00 31.75 3.69
3147 8516 0.527565 GGCTGGGTAATGCTTGTGTG 59.472 55.000 0.00 0.00 0.00 3.82
3157 8526 4.595762 AATGCTTGTGTGATCTTTGCTT 57.404 36.364 0.00 0.00 0.00 3.91
3158 8527 4.595762 ATGCTTGTGTGATCTTTGCTTT 57.404 36.364 0.00 0.00 0.00 3.51
3159 8528 3.968649 TGCTTGTGTGATCTTTGCTTTC 58.031 40.909 0.00 0.00 0.00 2.62
3169 8538 2.771089 TCTTTGCTTTCAGAGATGCGT 58.229 42.857 0.00 0.00 29.57 5.24
3174 8543 1.328986 GCTTTCAGAGATGCGTAAGGC 59.671 52.381 0.00 0.00 43.96 4.35
3211 8580 4.337555 TCGTTTAGCCATGGTAGAGTAGAC 59.662 45.833 14.67 2.86 0.00 2.59
3246 8618 7.485595 TGTTTGCGATGAAACAATATCATGAAG 59.514 33.333 0.00 0.00 41.70 3.02
3255 8627 1.888215 ATATCATGAAGCCTGGCACG 58.112 50.000 22.65 3.99 0.00 5.34
3287 8659 1.010419 CCGCCAGAACATTGCAAAGC 61.010 55.000 1.71 0.00 0.00 3.51
3289 8661 1.199789 CGCCAGAACATTGCAAAGCTA 59.800 47.619 1.71 0.00 0.00 3.32
3290 8662 2.351641 CGCCAGAACATTGCAAAGCTAA 60.352 45.455 1.71 0.00 0.00 3.09
3292 8664 3.676646 GCCAGAACATTGCAAAGCTAAAG 59.323 43.478 1.71 0.00 0.00 1.85
3347 8719 0.250901 GGCTTGTCTCTCTTGCCCAA 60.251 55.000 0.00 0.00 37.81 4.12
3348 8720 1.609208 GCTTGTCTCTCTTGCCCAAA 58.391 50.000 0.00 0.00 0.00 3.28
3349 8721 1.538950 GCTTGTCTCTCTTGCCCAAAG 59.461 52.381 0.00 0.00 37.22 2.77
3350 8722 2.811873 GCTTGTCTCTCTTGCCCAAAGA 60.812 50.000 0.00 0.00 42.83 2.52
3351 8723 3.480470 CTTGTCTCTCTTGCCCAAAGAA 58.520 45.455 0.00 0.00 44.38 2.52
3354 8726 5.241403 TGTCTCTCTTGCCCAAAGAAATA 57.759 39.130 0.00 0.00 44.38 1.40
3355 8727 5.003804 TGTCTCTCTTGCCCAAAGAAATAC 58.996 41.667 0.00 0.00 44.38 1.89
3357 8729 5.352846 GTCTCTCTTGCCCAAAGAAATACTC 59.647 44.000 0.00 0.00 44.38 2.59
3358 8730 4.589908 TCTCTTGCCCAAAGAAATACTCC 58.410 43.478 0.00 0.00 44.38 3.85
3359 8731 3.696548 CTCTTGCCCAAAGAAATACTCCC 59.303 47.826 0.00 0.00 44.38 4.30
3360 8732 3.075283 TCTTGCCCAAAGAAATACTCCCA 59.925 43.478 0.00 0.00 42.09 4.37
3361 8733 2.802719 TGCCCAAAGAAATACTCCCAC 58.197 47.619 0.00 0.00 0.00 4.61
3362 8734 2.109128 TGCCCAAAGAAATACTCCCACA 59.891 45.455 0.00 0.00 0.00 4.17
3363 8735 3.245586 TGCCCAAAGAAATACTCCCACAT 60.246 43.478 0.00 0.00 0.00 3.21
3364 8736 3.131046 GCCCAAAGAAATACTCCCACATG 59.869 47.826 0.00 0.00 0.00 3.21
3365 8737 4.344104 CCCAAAGAAATACTCCCACATGT 58.656 43.478 0.00 0.00 0.00 3.21
3366 8738 4.158394 CCCAAAGAAATACTCCCACATGTG 59.842 45.833 19.31 19.31 0.00 3.21
3367 8739 4.766891 CCAAAGAAATACTCCCACATGTGT 59.233 41.667 23.79 8.43 0.00 3.72
3368 8740 5.335897 CCAAAGAAATACTCCCACATGTGTG 60.336 44.000 23.79 13.69 45.23 3.82
3369 8741 4.640771 AGAAATACTCCCACATGTGTGT 57.359 40.909 23.79 19.64 44.21 3.72
3370 8742 4.985538 AGAAATACTCCCACATGTGTGTT 58.014 39.130 23.79 7.62 44.21 3.32
3371 8743 5.003804 AGAAATACTCCCACATGTGTGTTC 58.996 41.667 23.79 11.83 44.21 3.18
3372 8744 2.851263 TACTCCCACATGTGTGTTCC 57.149 50.000 23.79 0.00 44.21 3.62
3373 8745 1.140312 ACTCCCACATGTGTGTTCCT 58.860 50.000 23.79 0.00 44.21 3.36
3374 8746 1.494721 ACTCCCACATGTGTGTTCCTT 59.505 47.619 23.79 0.00 44.21 3.36
3375 8747 2.091885 ACTCCCACATGTGTGTTCCTTT 60.092 45.455 23.79 0.00 44.21 3.11
3376 8748 2.554032 CTCCCACATGTGTGTTCCTTTC 59.446 50.000 23.79 0.00 44.21 2.62
3377 8749 1.613437 CCCACATGTGTGTTCCTTTCC 59.387 52.381 23.79 0.00 44.21 3.13
3378 8750 2.586425 CCACATGTGTGTTCCTTTCCT 58.414 47.619 23.79 0.00 44.21 3.36
3379 8751 3.497763 CCCACATGTGTGTTCCTTTCCTA 60.498 47.826 23.79 0.00 44.21 2.94
3380 8752 4.335416 CCACATGTGTGTTCCTTTCCTAT 58.665 43.478 23.79 0.00 44.21 2.57
3381 8753 4.766891 CCACATGTGTGTTCCTTTCCTATT 59.233 41.667 23.79 0.00 44.21 1.73
3382 8754 5.243730 CCACATGTGTGTTCCTTTCCTATTT 59.756 40.000 23.79 0.00 44.21 1.40
3383 8755 6.151691 CACATGTGTGTTCCTTTCCTATTTG 58.848 40.000 18.03 0.00 40.96 2.32
3384 8756 5.833131 ACATGTGTGTTCCTTTCCTATTTGT 59.167 36.000 0.00 0.00 34.01 2.83
3385 8757 6.323739 ACATGTGTGTTCCTTTCCTATTTGTT 59.676 34.615 0.00 0.00 34.01 2.83
3386 8758 6.142818 TGTGTGTTCCTTTCCTATTTGTTG 57.857 37.500 0.00 0.00 0.00 3.33
3387 8759 5.888724 TGTGTGTTCCTTTCCTATTTGTTGA 59.111 36.000 0.00 0.00 0.00 3.18
3388 8760 6.549364 TGTGTGTTCCTTTCCTATTTGTTGAT 59.451 34.615 0.00 0.00 0.00 2.57
3389 8761 6.863126 GTGTGTTCCTTTCCTATTTGTTGATG 59.137 38.462 0.00 0.00 0.00 3.07
3390 8762 6.775142 TGTGTTCCTTTCCTATTTGTTGATGA 59.225 34.615 0.00 0.00 0.00 2.92
3391 8763 7.451255 TGTGTTCCTTTCCTATTTGTTGATGAT 59.549 33.333 0.00 0.00 0.00 2.45
3392 8764 7.756722 GTGTTCCTTTCCTATTTGTTGATGATG 59.243 37.037 0.00 0.00 0.00 3.07
3393 8765 7.669304 TGTTCCTTTCCTATTTGTTGATGATGA 59.331 33.333 0.00 0.00 0.00 2.92
3394 8766 8.689972 GTTCCTTTCCTATTTGTTGATGATGAT 58.310 33.333 0.00 0.00 0.00 2.45
3395 8767 8.229253 TCCTTTCCTATTTGTTGATGATGATG 57.771 34.615 0.00 0.00 0.00 3.07
3396 8768 6.921857 CCTTTCCTATTTGTTGATGATGATGC 59.078 38.462 0.00 0.00 0.00 3.91
3397 8769 7.201884 CCTTTCCTATTTGTTGATGATGATGCT 60.202 37.037 0.00 0.00 0.00 3.79
3398 8770 6.628919 TCCTATTTGTTGATGATGATGCTG 57.371 37.500 0.00 0.00 0.00 4.41
3399 8771 5.533528 TCCTATTTGTTGATGATGATGCTGG 59.466 40.000 0.00 0.00 0.00 4.85
3400 8772 4.665833 ATTTGTTGATGATGATGCTGGG 57.334 40.909 0.00 0.00 0.00 4.45
3401 8773 2.061509 TGTTGATGATGATGCTGGGG 57.938 50.000 0.00 0.00 0.00 4.96
3402 8774 0.672342 GTTGATGATGATGCTGGGGC 59.328 55.000 0.00 0.00 39.26 5.80
3403 8775 0.468585 TTGATGATGATGCTGGGGCC 60.469 55.000 0.00 0.00 37.74 5.80
3404 8776 1.605738 GATGATGATGCTGGGGCCC 60.606 63.158 18.17 18.17 37.74 5.80
3405 8777 2.361865 GATGATGATGCTGGGGCCCA 62.362 60.000 26.87 26.87 37.74 5.36
3406 8778 1.736491 ATGATGATGCTGGGGCCCAT 61.736 55.000 28.95 12.30 37.74 4.00
3407 8779 1.605738 GATGATGCTGGGGCCCATC 60.606 63.158 28.95 23.93 38.91 3.51
3408 8780 2.077842 GATGATGCTGGGGCCCATCT 62.078 60.000 28.95 13.91 40.73 2.90
3409 8781 2.077842 ATGATGCTGGGGCCCATCTC 62.078 60.000 28.95 21.99 38.84 2.75
3413 8785 2.429058 CTGGGGCCCATCTCGATG 59.571 66.667 28.95 8.78 38.51 3.84
3416 8788 4.996434 GGGCCCATCTCGATGCCG 62.996 72.222 19.95 0.00 44.96 5.69
3450 8822 4.883083 GTTTGCCACGAGATATATCCTCA 58.117 43.478 9.18 0.00 0.00 3.86
3451 8823 5.297547 GTTTGCCACGAGATATATCCTCAA 58.702 41.667 9.18 2.84 0.00 3.02
3452 8824 4.521130 TGCCACGAGATATATCCTCAAC 57.479 45.455 9.18 0.00 0.00 3.18
3453 8825 3.895041 TGCCACGAGATATATCCTCAACA 59.105 43.478 9.18 0.00 0.00 3.33
3454 8826 4.343814 TGCCACGAGATATATCCTCAACAA 59.656 41.667 9.18 0.00 0.00 2.83
3455 8827 5.012046 TGCCACGAGATATATCCTCAACAAT 59.988 40.000 9.18 0.00 0.00 2.71
3456 8828 6.210584 TGCCACGAGATATATCCTCAACAATA 59.789 38.462 9.18 0.00 0.00 1.90
3457 8829 6.754209 GCCACGAGATATATCCTCAACAATAG 59.246 42.308 9.18 0.00 0.00 1.73
3458 8830 7.577807 GCCACGAGATATATCCTCAACAATAGT 60.578 40.741 9.18 0.00 0.00 2.12
3459 8831 8.957466 CCACGAGATATATCCTCAACAATAGTA 58.043 37.037 9.18 0.00 0.00 1.82
3460 8832 9.776158 CACGAGATATATCCTCAACAATAGTAC 57.224 37.037 9.18 0.00 0.00 2.73
3461 8833 9.516546 ACGAGATATATCCTCAACAATAGTACA 57.483 33.333 9.18 0.00 0.00 2.90
3467 8839 6.560003 ATCCTCAACAATAGTACATGACCA 57.440 37.500 0.00 0.00 0.00 4.02
3468 8840 5.977635 TCCTCAACAATAGTACATGACCAG 58.022 41.667 0.00 0.00 0.00 4.00
3469 8841 5.719563 TCCTCAACAATAGTACATGACCAGA 59.280 40.000 0.00 0.00 0.00 3.86
3470 8842 6.384015 TCCTCAACAATAGTACATGACCAGAT 59.616 38.462 0.00 0.00 0.00 2.90
3471 8843 7.050377 CCTCAACAATAGTACATGACCAGATT 58.950 38.462 0.00 0.00 0.00 2.40
3472 8844 7.554118 CCTCAACAATAGTACATGACCAGATTT 59.446 37.037 0.00 0.00 0.00 2.17
3473 8845 8.862325 TCAACAATAGTACATGACCAGATTTT 57.138 30.769 0.00 0.00 0.00 1.82
3474 8846 9.295825 TCAACAATAGTACATGACCAGATTTTT 57.704 29.630 0.00 0.00 0.00 1.94
3492 8864 4.572985 TTTTTCTTGAGACATGCACAGG 57.427 40.909 0.00 0.00 0.00 4.00
3508 8880 0.745845 CAGGTGTATGGCTGCTGGTC 60.746 60.000 0.00 0.00 0.00 4.02
3550 8922 3.810941 GGTCCAAAGACGTACACAATTCA 59.189 43.478 0.00 0.00 44.54 2.57
3586 8958 3.516578 GCCTCGGCCATGTATAGTC 57.483 57.895 2.24 0.00 34.56 2.59
3587 8959 0.679505 GCCTCGGCCATGTATAGTCA 59.320 55.000 2.24 0.00 34.56 3.41
3592 8970 1.605457 CGGCCATGTATAGTCATGCGT 60.605 52.381 2.24 0.00 42.44 5.24
3600 8978 1.091771 ATAGTCATGCGTGGTGCTGC 61.092 55.000 5.98 0.00 46.63 5.25
3608 8986 2.111878 GTGGTGCTGCTCTGGTGT 59.888 61.111 0.00 0.00 0.00 4.16
3609 8987 1.526917 GTGGTGCTGCTCTGGTGTT 60.527 57.895 0.00 0.00 0.00 3.32
3610 8988 1.103398 GTGGTGCTGCTCTGGTGTTT 61.103 55.000 0.00 0.00 0.00 2.83
3616 8994 3.619038 GTGCTGCTCTGGTGTTTATCTAC 59.381 47.826 0.00 0.00 0.00 2.59
3631 9009 6.092122 TGTTTATCTACAAGCTGACCATTTCG 59.908 38.462 0.00 0.00 0.00 3.46
3636 9014 3.270877 ACAAGCTGACCATTTCGGATAC 58.729 45.455 0.00 0.00 38.63 2.24
3638 9016 3.845781 AGCTGACCATTTCGGATACAT 57.154 42.857 0.00 0.00 38.63 2.29
3639 9017 4.955811 AGCTGACCATTTCGGATACATA 57.044 40.909 0.00 0.00 38.63 2.29
3640 9018 5.290493 AGCTGACCATTTCGGATACATAA 57.710 39.130 0.00 0.00 38.63 1.90
3641 9019 5.300752 AGCTGACCATTTCGGATACATAAG 58.699 41.667 0.00 0.00 38.63 1.73
3642 9020 5.057149 GCTGACCATTTCGGATACATAAGT 58.943 41.667 0.00 0.00 38.63 2.24
3643 9021 5.527582 GCTGACCATTTCGGATACATAAGTT 59.472 40.000 0.00 0.00 38.63 2.66
3644 9022 6.511767 GCTGACCATTTCGGATACATAAGTTG 60.512 42.308 0.00 0.00 38.63 3.16
3645 9023 6.411376 TGACCATTTCGGATACATAAGTTGT 58.589 36.000 0.00 0.00 39.36 3.32
3646 9024 7.557724 TGACCATTTCGGATACATAAGTTGTA 58.442 34.615 0.00 0.00 40.86 2.41
3647 9025 8.041919 TGACCATTTCGGATACATAAGTTGTAA 58.958 33.333 0.00 0.00 40.35 2.41
3648 9026 8.974060 ACCATTTCGGATACATAAGTTGTAAT 57.026 30.769 0.00 0.00 40.35 1.89
3649 9027 9.052759 ACCATTTCGGATACATAAGTTGTAATC 57.947 33.333 0.00 0.00 40.35 1.75
3650 9028 8.221100 CCATTTCGGATACATAAGTTGTAATCG 58.779 37.037 0.00 0.00 43.84 3.34
3651 9029 8.761497 CATTTCGGATACATAAGTTGTAATCGT 58.239 33.333 9.31 0.00 43.84 3.73
3652 9030 7.919313 TTCGGATACATAAGTTGTAATCGTC 57.081 36.000 9.31 0.00 43.84 4.20
3653 9031 7.030075 TCGGATACATAAGTTGTAATCGTCA 57.970 36.000 9.31 0.00 43.84 4.35
3654 9032 7.654568 TCGGATACATAAGTTGTAATCGTCAT 58.345 34.615 9.31 0.00 43.84 3.06
3655 9033 7.806487 TCGGATACATAAGTTGTAATCGTCATC 59.194 37.037 9.31 0.00 43.84 2.92
3656 9034 7.593644 CGGATACATAAGTTGTAATCGTCATCA 59.406 37.037 0.00 0.00 43.84 3.07
3657 9035 8.916654 GGATACATAAGTTGTAATCGTCATCAG 58.083 37.037 0.00 0.00 43.84 2.90
3658 9036 9.678941 GATACATAAGTTGTAATCGTCATCAGA 57.321 33.333 0.00 0.00 43.84 3.27
3659 9037 7.993821 ACATAAGTTGTAATCGTCATCAGAG 57.006 36.000 0.00 0.00 36.57 3.35
3660 9038 7.772166 ACATAAGTTGTAATCGTCATCAGAGA 58.228 34.615 0.00 0.00 36.57 3.10
3661 9039 8.251026 ACATAAGTTGTAATCGTCATCAGAGAA 58.749 33.333 0.00 0.00 36.57 2.87
3662 9040 9.087424 CATAAGTTGTAATCGTCATCAGAGAAA 57.913 33.333 0.00 0.00 0.00 2.52
3663 9041 7.588143 AAGTTGTAATCGTCATCAGAGAAAG 57.412 36.000 0.00 0.00 0.00 2.62
3664 9042 6.692486 AGTTGTAATCGTCATCAGAGAAAGT 58.308 36.000 0.00 0.00 0.00 2.66
3665 9043 7.827701 AGTTGTAATCGTCATCAGAGAAAGTA 58.172 34.615 0.00 0.00 0.00 2.24
3666 9044 7.971168 AGTTGTAATCGTCATCAGAGAAAGTAG 59.029 37.037 0.00 0.00 0.00 2.57
3667 9045 7.392494 TGTAATCGTCATCAGAGAAAGTAGT 57.608 36.000 0.00 0.00 0.00 2.73
3668 9046 8.502105 TGTAATCGTCATCAGAGAAAGTAGTA 57.498 34.615 0.00 0.00 0.00 1.82
3669 9047 9.121658 TGTAATCGTCATCAGAGAAAGTAGTAT 57.878 33.333 0.00 0.00 0.00 2.12
3674 9052 9.338622 TCGTCATCAGAGAAAGTAGTATATTCA 57.661 33.333 0.00 0.00 0.00 2.57
3695 9073 7.918536 TTCATTCGTCTCTAGTAAGTGTACT 57.081 36.000 0.00 0.00 43.27 2.73
3696 9074 7.918536 TCATTCGTCTCTAGTAAGTGTACTT 57.081 36.000 2.51 2.51 41.06 2.24
3697 9075 9.440773 TTCATTCGTCTCTAGTAAGTGTACTTA 57.559 33.333 0.50 0.50 41.06 2.24
3698 9076 9.096160 TCATTCGTCTCTAGTAAGTGTACTTAG 57.904 37.037 4.79 0.00 41.06 2.18
3699 9077 7.840342 TTCGTCTCTAGTAAGTGTACTTAGG 57.160 40.000 4.79 0.42 41.06 2.69
3700 9078 7.175347 TCGTCTCTAGTAAGTGTACTTAGGA 57.825 40.000 4.79 4.11 41.06 2.94
3701 9079 7.615403 TCGTCTCTAGTAAGTGTACTTAGGAA 58.385 38.462 4.79 0.00 41.06 3.36
3702 9080 8.097038 TCGTCTCTAGTAAGTGTACTTAGGAAA 58.903 37.037 4.79 0.00 41.06 3.13
3703 9081 8.389603 CGTCTCTAGTAAGTGTACTTAGGAAAG 58.610 40.741 4.79 2.52 41.06 2.62
3704 9082 8.676401 GTCTCTAGTAAGTGTACTTAGGAAAGG 58.324 40.741 4.79 0.00 41.06 3.11
3705 9083 7.833183 TCTCTAGTAAGTGTACTTAGGAAAGGG 59.167 40.741 4.79 1.84 41.06 3.95
3706 9084 7.702785 TCTAGTAAGTGTACTTAGGAAAGGGA 58.297 38.462 4.79 0.00 41.06 4.20
3707 9085 8.172741 TCTAGTAAGTGTACTTAGGAAAGGGAA 58.827 37.037 4.79 0.00 41.06 3.97
3708 9086 7.622502 AGTAAGTGTACTTAGGAAAGGGAAA 57.377 36.000 4.79 0.00 37.25 3.13
3709 9087 8.037723 AGTAAGTGTACTTAGGAAAGGGAAAA 57.962 34.615 4.79 0.00 37.25 2.29
3710 9088 8.496916 AGTAAGTGTACTTAGGAAAGGGAAAAA 58.503 33.333 4.79 0.00 37.25 1.94
3711 9089 9.293404 GTAAGTGTACTTAGGAAAGGGAAAAAT 57.707 33.333 4.79 0.00 38.94 1.82
3712 9090 7.997773 AGTGTACTTAGGAAAGGGAAAAATC 57.002 36.000 0.00 0.00 37.01 2.17
3713 9091 6.946583 AGTGTACTTAGGAAAGGGAAAAATCC 59.053 38.462 0.00 0.00 37.01 3.01
3714 9092 5.941647 TGTACTTAGGAAAGGGAAAAATCCG 59.058 40.000 0.00 0.00 37.01 4.18
3715 9093 5.251182 ACTTAGGAAAGGGAAAAATCCGA 57.749 39.130 0.00 0.00 37.01 4.55
3716 9094 5.637127 ACTTAGGAAAGGGAAAAATCCGAA 58.363 37.500 0.00 0.00 37.01 4.30
3717 9095 5.475909 ACTTAGGAAAGGGAAAAATCCGAAC 59.524 40.000 0.00 0.00 37.01 3.95
3718 9096 3.839778 AGGAAAGGGAAAAATCCGAACA 58.160 40.909 0.00 0.00 37.05 3.18
3719 9097 3.572682 AGGAAAGGGAAAAATCCGAACAC 59.427 43.478 0.00 0.00 37.05 3.32
3720 9098 3.319689 GGAAAGGGAAAAATCCGAACACA 59.680 43.478 0.00 0.00 0.00 3.72
3721 9099 4.202172 GGAAAGGGAAAAATCCGAACACAA 60.202 41.667 0.00 0.00 0.00 3.33
3722 9100 5.510690 GGAAAGGGAAAAATCCGAACACAAT 60.511 40.000 0.00 0.00 0.00 2.71
3723 9101 6.294843 GGAAAGGGAAAAATCCGAACACAATA 60.295 38.462 0.00 0.00 0.00 1.90
3724 9102 6.850752 AAGGGAAAAATCCGAACACAATAT 57.149 33.333 0.00 0.00 0.00 1.28
3725 9103 6.850752 AGGGAAAAATCCGAACACAATATT 57.149 33.333 0.00 0.00 0.00 1.28
3726 9104 7.948034 AGGGAAAAATCCGAACACAATATTA 57.052 32.000 0.00 0.00 0.00 0.98
3727 9105 7.996385 AGGGAAAAATCCGAACACAATATTAG 58.004 34.615 0.00 0.00 0.00 1.73
3728 9106 7.832187 AGGGAAAAATCCGAACACAATATTAGA 59.168 33.333 0.00 0.00 0.00 2.10
3729 9107 8.463607 GGGAAAAATCCGAACACAATATTAGAA 58.536 33.333 0.00 0.00 0.00 2.10
3730 9108 9.503427 GGAAAAATCCGAACACAATATTAGAAG 57.497 33.333 0.00 0.00 0.00 2.85
3731 9109 8.911247 AAAAATCCGAACACAATATTAGAAGC 57.089 30.769 0.00 0.00 0.00 3.86
3732 9110 6.619801 AATCCGAACACAATATTAGAAGCC 57.380 37.500 0.00 0.00 0.00 4.35
3733 9111 4.116961 TCCGAACACAATATTAGAAGCCG 58.883 43.478 0.00 0.00 0.00 5.52
3734 9112 3.247648 CCGAACACAATATTAGAAGCCGG 59.752 47.826 0.00 0.00 0.00 6.13
3735 9113 4.116961 CGAACACAATATTAGAAGCCGGA 58.883 43.478 5.05 0.00 0.00 5.14
3736 9114 4.750098 CGAACACAATATTAGAAGCCGGAT 59.250 41.667 5.05 0.00 0.00 4.18
3737 9115 5.924254 CGAACACAATATTAGAAGCCGGATA 59.076 40.000 5.05 0.00 0.00 2.59
3738 9116 6.422701 CGAACACAATATTAGAAGCCGGATAA 59.577 38.462 5.05 0.00 0.00 1.75
3739 9117 7.117812 CGAACACAATATTAGAAGCCGGATAAT 59.882 37.037 5.05 6.27 0.00 1.28
3740 9118 9.431887 GAACACAATATTAGAAGCCGGATAATA 57.568 33.333 5.05 8.37 0.00 0.98
3741 9119 9.959721 AACACAATATTAGAAGCCGGATAATAT 57.040 29.630 5.05 10.30 34.90 1.28
3742 9120 9.601217 ACACAATATTAGAAGCCGGATAATATC 57.399 33.333 5.05 0.00 33.19 1.63
3743 9121 9.823647 CACAATATTAGAAGCCGGATAATATCT 57.176 33.333 5.05 0.00 33.19 1.98
3747 9125 4.640789 AGAAGCCGGATAATATCTAGCG 57.359 45.455 5.05 0.00 34.14 4.26
3748 9126 4.017808 AGAAGCCGGATAATATCTAGCGT 58.982 43.478 5.05 2.32 34.14 5.07
3749 9127 3.784701 AGCCGGATAATATCTAGCGTG 57.215 47.619 5.05 0.00 34.14 5.34
3750 9128 2.427453 AGCCGGATAATATCTAGCGTGG 59.573 50.000 5.05 0.00 34.14 4.94
3751 9129 2.165845 GCCGGATAATATCTAGCGTGGT 59.834 50.000 5.05 0.00 0.00 4.16
3752 9130 3.379372 GCCGGATAATATCTAGCGTGGTA 59.621 47.826 5.05 0.00 0.00 3.25
3753 9131 4.497674 GCCGGATAATATCTAGCGTGGTAG 60.498 50.000 5.05 0.00 0.00 3.18
3754 9132 4.880120 CCGGATAATATCTAGCGTGGTAGA 59.120 45.833 10.85 10.85 33.52 2.59
3755 9133 5.007823 CCGGATAATATCTAGCGTGGTAGAG 59.992 48.000 13.51 0.00 32.49 2.43
3756 9134 5.585445 CGGATAATATCTAGCGTGGTAGAGT 59.415 44.000 13.51 3.64 32.49 3.24
3757 9135 6.238157 CGGATAATATCTAGCGTGGTAGAGTC 60.238 46.154 13.51 7.09 32.49 3.36
3758 9136 6.238157 GGATAATATCTAGCGTGGTAGAGTCG 60.238 46.154 13.51 0.00 32.49 4.18
3762 9140 2.875485 GCGTGGTAGAGTCGCTGA 59.125 61.111 0.00 0.00 45.29 4.26
3763 9141 1.433879 GCGTGGTAGAGTCGCTGAT 59.566 57.895 0.00 0.00 45.29 2.90
3764 9142 0.867753 GCGTGGTAGAGTCGCTGATG 60.868 60.000 0.00 0.00 45.29 3.07
3793 9171 6.690194 AATTCTTGCTCCAAGCTATAACAG 57.310 37.500 0.11 0.00 42.97 3.16
3801 9179 4.662278 TCCAAGCTATAACAGTTTTGGCT 58.338 39.130 8.51 8.51 39.26 4.75
3802 9180 5.076873 TCCAAGCTATAACAGTTTTGGCTT 58.923 37.500 17.78 17.78 39.26 4.35
3803 9181 5.183140 TCCAAGCTATAACAGTTTTGGCTTC 59.817 40.000 19.81 0.00 39.26 3.86
3804 9182 5.183904 CCAAGCTATAACAGTTTTGGCTTCT 59.816 40.000 19.81 3.19 36.59 2.85
3805 9183 6.317857 CAAGCTATAACAGTTTTGGCTTCTC 58.682 40.000 19.81 0.00 36.59 2.87
3806 9184 5.810095 AGCTATAACAGTTTTGGCTTCTCT 58.190 37.500 8.51 0.00 0.00 3.10
3807 9185 5.877564 AGCTATAACAGTTTTGGCTTCTCTC 59.122 40.000 8.51 0.00 0.00 3.20
3808 9186 5.220491 GCTATAACAGTTTTGGCTTCTCTCG 60.220 44.000 5.06 0.00 0.00 4.04
3809 9187 1.884235 ACAGTTTTGGCTTCTCTCGG 58.116 50.000 0.00 0.00 0.00 4.63
3810 9188 1.416401 ACAGTTTTGGCTTCTCTCGGA 59.584 47.619 0.00 0.00 0.00 4.55
3811 9189 2.158813 ACAGTTTTGGCTTCTCTCGGAA 60.159 45.455 0.00 0.00 0.00 4.30
3824 9202 4.437239 TCTCTCGGAAGATGAATTTGAGC 58.563 43.478 0.00 0.00 40.84 4.26
3825 9203 4.161189 TCTCTCGGAAGATGAATTTGAGCT 59.839 41.667 0.00 0.00 40.84 4.09
3826 9204 4.836825 TCTCGGAAGATGAATTTGAGCTT 58.163 39.130 0.00 0.00 40.84 3.74
3827 9205 4.872691 TCTCGGAAGATGAATTTGAGCTTC 59.127 41.667 5.44 5.44 40.84 3.86
3829 9207 4.645762 GGAAGATGAATTTGAGCTTCCC 57.354 45.455 18.61 4.65 46.14 3.97
3830 9208 4.019174 GGAAGATGAATTTGAGCTTCCCA 58.981 43.478 18.61 0.00 46.14 4.37
3831 9209 4.142293 GGAAGATGAATTTGAGCTTCCCAC 60.142 45.833 18.61 0.00 46.14 4.61
3832 9210 3.359950 AGATGAATTTGAGCTTCCCACC 58.640 45.455 0.00 0.00 0.00 4.61
3833 9211 2.978156 TGAATTTGAGCTTCCCACCT 57.022 45.000 0.00 0.00 0.00 4.00
3834 9212 3.243359 TGAATTTGAGCTTCCCACCTT 57.757 42.857 0.00 0.00 0.00 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 7.945033 AATTGGTTGCTTTGTAACTACAATG 57.055 32.000 3.25 7.04 44.72 2.82
70 71 8.132362 CAGTTAATTGGTTGCTTTGTAACTACA 58.868 33.333 0.00 0.00 31.06 2.74
71 72 8.347035 TCAGTTAATTGGTTGCTTTGTAACTAC 58.653 33.333 0.00 0.00 31.06 2.73
126 127 3.327404 ACCCCCTAAGGCACGGTG 61.327 66.667 3.15 3.15 0.00 4.94
134 135 1.709994 GGATCTGGCCACCCCCTAAG 61.710 65.000 0.00 0.00 0.00 2.18
189 190 1.483004 TGTCGTCCTTCAAAGACACCA 59.517 47.619 0.00 0.00 38.52 4.17
218 219 1.165270 GAACAACCCCACAATCCTCG 58.835 55.000 0.00 0.00 0.00 4.63
339 340 8.497554 GCTTTGCATCTAATCATTTGACAAAAA 58.502 29.630 4.41 0.00 0.00 1.94
343 344 6.270156 TGCTTTGCATCTAATCATTTGACA 57.730 33.333 0.00 0.00 31.71 3.58
385 386 8.094548 TGTATACAGAACACTACTTTTGCATCT 58.905 33.333 0.08 0.00 0.00 2.90
403 404 9.385902 GCATTTAAGCATGTTATGTGTATACAG 57.614 33.333 5.62 0.00 40.79 2.74
404 405 9.119418 AGCATTTAAGCATGTTATGTGTATACA 57.881 29.630 0.08 0.08 37.92 2.29
405 406 9.950680 AAGCATTTAAGCATGTTATGTGTATAC 57.049 29.630 0.00 0.00 36.85 1.47
413 414 9.603921 AAGCATTTAAGCATTTAAGCATGTTAT 57.396 25.926 0.00 0.00 36.85 1.89
434 435 8.627403 CCAAATATACTCTTGTGATGAAAGCAT 58.373 33.333 0.00 0.00 30.84 3.79
435 436 7.415541 GCCAAATATACTCTTGTGATGAAAGCA 60.416 37.037 0.00 0.00 0.00 3.91
436 437 6.914757 GCCAAATATACTCTTGTGATGAAAGC 59.085 38.462 0.00 0.00 0.00 3.51
437 438 7.988737 TGCCAAATATACTCTTGTGATGAAAG 58.011 34.615 0.00 0.00 0.00 2.62
438 439 7.611467 ACTGCCAAATATACTCTTGTGATGAAA 59.389 33.333 0.00 0.00 0.00 2.69
439 440 7.066163 CACTGCCAAATATACTCTTGTGATGAA 59.934 37.037 0.00 0.00 0.00 2.57
449 450 5.007136 GCTTCAGACACTGCCAAATATACTC 59.993 44.000 0.00 0.00 0.00 2.59
513 514 4.202111 CCGTTGGATGAGGAAGTTTTGTTT 60.202 41.667 0.00 0.00 0.00 2.83
520 521 0.400213 TTGCCGTTGGATGAGGAAGT 59.600 50.000 0.00 0.00 0.00 3.01
528 749 1.750682 GCCCTATCTTTGCCGTTGGAT 60.751 52.381 0.00 0.00 0.00 3.41
536 757 0.107165 AACCCGAGCCCTATCTTTGC 60.107 55.000 0.00 0.00 0.00 3.68
562 783 5.193930 TCAGGACTAGAATCTTAGGGTGAGA 59.806 44.000 0.00 0.00 0.00 3.27
632 883 6.201517 CAGTTGTCTTGATTCGTCATGTTTT 58.798 36.000 0.00 0.00 0.00 2.43
642 893 4.775236 AGCTATCCCAGTTGTCTTGATTC 58.225 43.478 0.00 0.00 0.00 2.52
691 1034 6.501781 AGTTTCATTTCAAAGTTCTGCAGAG 58.498 36.000 17.43 4.96 0.00 3.35
732 1075 5.296780 TCCGAAATATGCAGGTTTCATTCTC 59.703 40.000 20.14 1.13 34.76 2.87
733 1076 5.066505 GTCCGAAATATGCAGGTTTCATTCT 59.933 40.000 20.14 0.00 34.76 2.40
734 1077 5.066505 AGTCCGAAATATGCAGGTTTCATTC 59.933 40.000 20.14 12.10 34.76 2.67
735 1078 4.949856 AGTCCGAAATATGCAGGTTTCATT 59.050 37.500 20.14 5.79 34.76 2.57
736 1079 4.336433 CAGTCCGAAATATGCAGGTTTCAT 59.664 41.667 20.14 6.27 34.76 2.57
737 1080 3.689161 CAGTCCGAAATATGCAGGTTTCA 59.311 43.478 20.14 5.43 34.76 2.69
738 1081 3.065371 CCAGTCCGAAATATGCAGGTTTC 59.935 47.826 13.70 13.70 0.00 2.78
739 1082 3.016736 CCAGTCCGAAATATGCAGGTTT 58.983 45.455 0.00 0.00 0.00 3.27
741 1084 1.837439 TCCAGTCCGAAATATGCAGGT 59.163 47.619 0.00 0.00 0.00 4.00
742 1085 2.103094 TCTCCAGTCCGAAATATGCAGG 59.897 50.000 0.00 0.00 0.00 4.85
743 1086 3.068732 TCTCTCCAGTCCGAAATATGCAG 59.931 47.826 0.00 0.00 0.00 4.41
744 1087 3.031013 TCTCTCCAGTCCGAAATATGCA 58.969 45.455 0.00 0.00 0.00 3.96
745 1088 3.735237 TCTCTCCAGTCCGAAATATGC 57.265 47.619 0.00 0.00 0.00 3.14
746 1089 5.294552 GGTTTTCTCTCCAGTCCGAAATATG 59.705 44.000 0.00 0.00 0.00 1.78
747 1090 5.429130 GGTTTTCTCTCCAGTCCGAAATAT 58.571 41.667 0.00 0.00 0.00 1.28
748 1091 4.619863 CGGTTTTCTCTCCAGTCCGAAATA 60.620 45.833 0.00 0.00 38.96 1.40
749 1092 3.676093 GGTTTTCTCTCCAGTCCGAAAT 58.324 45.455 0.00 0.00 0.00 2.17
750 1093 2.547218 CGGTTTTCTCTCCAGTCCGAAA 60.547 50.000 0.00 0.00 38.96 3.46
753 1096 0.317479 ACGGTTTTCTCTCCAGTCCG 59.683 55.000 0.00 0.00 41.77 4.79
754 1097 2.143925 CAACGGTTTTCTCTCCAGTCC 58.856 52.381 0.00 0.00 0.00 3.85
755 1098 2.801111 GACAACGGTTTTCTCTCCAGTC 59.199 50.000 0.00 0.00 0.00 3.51
756 1099 2.484947 GGACAACGGTTTTCTCTCCAGT 60.485 50.000 6.95 0.00 0.00 4.00
757 1100 2.143925 GGACAACGGTTTTCTCTCCAG 58.856 52.381 6.95 0.00 0.00 3.86
759 1102 2.143925 CAGGACAACGGTTTTCTCTCC 58.856 52.381 6.95 0.02 0.00 3.71
770 1142 2.432628 GGCCGACTCAGGACAACG 60.433 66.667 0.00 0.00 39.73 4.10
794 1166 0.179134 CCTCGACCAGACCGATTCAC 60.179 60.000 0.00 0.00 35.35 3.18
798 1170 3.921521 GTCCTCGACCAGACCGAT 58.078 61.111 0.00 0.00 35.35 4.18
808 1200 3.706373 GCCCTTGCTGGTCCTCGA 61.706 66.667 0.00 0.00 33.53 4.04
814 1206 2.531685 TGGTAGGCCCTTGCTGGT 60.532 61.111 0.00 0.00 37.74 4.00
827 1219 2.897207 CCGAATGGTCGCCTGGTA 59.103 61.111 0.00 0.00 46.28 3.25
855 1247 0.513820 CGCGGTTGAAATTACGTGGT 59.486 50.000 0.00 0.00 33.65 4.16
874 1266 0.893447 AGTATATAGGGTTCGGCCGC 59.107 55.000 23.51 7.37 38.44 6.53
899 1291 4.157120 CGGTAGGGTTGGGAGCGG 62.157 72.222 0.00 0.00 0.00 5.52
950 1342 3.687828 AAGGAGGAGGAGGAGGCGG 62.688 68.421 0.00 0.00 0.00 6.13
951 1343 2.042435 AAGGAGGAGGAGGAGGCG 60.042 66.667 0.00 0.00 0.00 5.52
1039 1439 3.695825 GAGGGGGAGTGGGAGGGA 61.696 72.222 0.00 0.00 0.00 4.20
1072 1482 0.820871 ACTCGGGACAGAATCAGCTC 59.179 55.000 0.00 0.00 0.00 4.09
1089 1499 3.595758 GCCGCAAACACAGCCACT 61.596 61.111 0.00 0.00 0.00 4.00
1092 1502 3.595758 ACAGCCGCAAACACAGCC 61.596 61.111 0.00 0.00 0.00 4.85
1094 1504 2.332514 CCACAGCCGCAAACACAG 59.667 61.111 0.00 0.00 0.00 3.66
1097 1507 3.276091 CGACCACAGCCGCAAACA 61.276 61.111 0.00 0.00 0.00 2.83
1118 1528 1.556564 TCGAATCGAAATCCGTCAGC 58.443 50.000 1.57 0.00 39.75 4.26
1149 1559 0.037882 CTCCGTGCTCTTCTTCTGCA 60.038 55.000 0.00 0.00 0.00 4.41
1150 1560 0.244994 TCTCCGTGCTCTTCTTCTGC 59.755 55.000 0.00 0.00 0.00 4.26
1274 1684 1.021968 GCGTGACAAAAACAGAGGGT 58.978 50.000 0.00 0.00 0.00 4.34
1287 1697 2.081212 CCGAGACAAGACGCGTGAC 61.081 63.158 20.70 2.09 0.00 3.67
1294 1704 3.104014 GGACGAACCGAGACAAGAC 57.896 57.895 0.00 0.00 0.00 3.01
1319 1729 0.398696 TAACCAGCCATTCACCACGT 59.601 50.000 0.00 0.00 0.00 4.49
1339 1749 0.596082 ATTTCAGCAAACGAACGGGG 59.404 50.000 0.00 0.00 0.00 5.73
1355 1766 2.414785 GCCGATTGACCCCGCATTT 61.415 57.895 0.00 0.00 0.00 2.32
1357 1768 3.757248 GAGCCGATTGACCCCGCAT 62.757 63.158 0.00 0.00 0.00 4.73
1358 1769 4.467084 GAGCCGATTGACCCCGCA 62.467 66.667 0.00 0.00 0.00 5.69
1359 1770 4.467084 TGAGCCGATTGACCCCGC 62.467 66.667 0.00 0.00 0.00 6.13
1360 1771 2.511600 GTGAGCCGATTGACCCCG 60.512 66.667 0.00 0.00 0.00 5.73
1361 1772 1.450312 CTGTGAGCCGATTGACCCC 60.450 63.158 0.00 0.00 0.00 4.95
1363 1774 1.137872 AGATCTGTGAGCCGATTGACC 59.862 52.381 0.00 0.00 0.00 4.02
1364 1775 2.200067 CAGATCTGTGAGCCGATTGAC 58.800 52.381 14.95 0.00 0.00 3.18
1365 1776 1.827344 ACAGATCTGTGAGCCGATTGA 59.173 47.619 27.37 0.00 43.11 2.57
1385 1810 1.073025 CTACACAACAGCCAGGCCA 59.927 57.895 8.22 0.00 0.00 5.36
1387 1812 0.035458 ACTCTACACAACAGCCAGGC 59.965 55.000 1.84 1.84 0.00 4.85
1401 1826 2.540383 ACCATCAACAGCTCCACTCTA 58.460 47.619 0.00 0.00 0.00 2.43
1409 1834 1.967319 AACGACAACCATCAACAGCT 58.033 45.000 0.00 0.00 0.00 4.24
1412 1837 2.370349 ACCAAACGACAACCATCAACA 58.630 42.857 0.00 0.00 0.00 3.33
1413 1838 3.430333 AACCAAACGACAACCATCAAC 57.570 42.857 0.00 0.00 0.00 3.18
1416 1841 5.401079 CACAAATAACCAAACGACAACCATC 59.599 40.000 0.00 0.00 0.00 3.51
1417 1842 5.163499 ACACAAATAACCAAACGACAACCAT 60.163 36.000 0.00 0.00 0.00 3.55
1428 1853 4.037446 GCAGTTCCAGACACAAATAACCAA 59.963 41.667 0.00 0.00 0.00 3.67
1431 1856 3.496884 TCGCAGTTCCAGACACAAATAAC 59.503 43.478 0.00 0.00 0.00 1.89
1454 1879 3.746045 AGCTGTCAACTTCTAACGGAA 57.254 42.857 0.00 0.00 0.00 4.30
1455 1880 3.746045 AAGCTGTCAACTTCTAACGGA 57.254 42.857 0.00 0.00 0.00 4.69
1467 1892 7.147828 ACAATCTATGTAGAGCTAAAGCTGTCA 60.148 37.037 9.68 6.48 46.54 3.58
1481 1906 8.204160 TGACCATCCTACAAACAATCTATGTAG 58.796 37.037 5.42 5.42 42.99 2.74
1483 1908 6.957631 TGACCATCCTACAAACAATCTATGT 58.042 36.000 0.00 0.00 46.82 2.29
1484 1909 7.864108 TTGACCATCCTACAAACAATCTATG 57.136 36.000 0.00 0.00 0.00 2.23
1502 1927 0.328926 TCAGAGCATGCCATTGACCA 59.671 50.000 15.66 0.00 0.00 4.02
1511 1936 2.357009 CACCCTAACATTCAGAGCATGC 59.643 50.000 10.51 10.51 0.00 4.06
1517 1942 4.588899 CATTGACCACCCTAACATTCAGA 58.411 43.478 0.00 0.00 0.00 3.27
1524 1949 1.750778 CATGGCATTGACCACCCTAAC 59.249 52.381 0.00 0.00 44.17 2.34
1526 1951 0.395586 GCATGGCATTGACCACCCTA 60.396 55.000 0.00 0.00 44.17 3.53
1530 1955 1.386525 ATCGGCATGGCATTGACCAC 61.387 55.000 20.37 0.00 44.17 4.16
1537 1962 1.741327 GCTCCAAATCGGCATGGCAT 61.741 55.000 20.37 9.05 36.62 4.40
1538 1963 2.417257 GCTCCAAATCGGCATGGCA 61.417 57.895 20.37 6.96 36.62 4.92
1539 1964 1.669999 AAGCTCCAAATCGGCATGGC 61.670 55.000 9.69 9.69 36.62 4.40
1540 1965 1.679139 TAAGCTCCAAATCGGCATGG 58.321 50.000 0.00 0.00 38.09 3.66
1541 1966 3.996150 ATTAAGCTCCAAATCGGCATG 57.004 42.857 0.00 0.00 33.14 4.06
1542 1967 4.887071 TGTAATTAAGCTCCAAATCGGCAT 59.113 37.500 0.00 0.00 33.14 4.40
1543 1968 4.265893 TGTAATTAAGCTCCAAATCGGCA 58.734 39.130 0.00 0.00 33.14 5.69
1544 1969 4.893424 TGTAATTAAGCTCCAAATCGGC 57.107 40.909 0.00 0.00 33.14 5.54
1545 1970 5.687285 GCATTGTAATTAAGCTCCAAATCGG 59.313 40.000 0.00 0.00 0.00 4.18
1546 1971 5.687285 GGCATTGTAATTAAGCTCCAAATCG 59.313 40.000 0.00 0.00 0.00 3.34
1547 1972 6.572519 TGGCATTGTAATTAAGCTCCAAATC 58.427 36.000 0.00 0.00 0.00 2.17
1548 1973 6.543430 TGGCATTGTAATTAAGCTCCAAAT 57.457 33.333 0.00 0.00 0.00 2.32
1549 1974 5.991933 TGGCATTGTAATTAAGCTCCAAA 57.008 34.783 0.00 0.00 0.00 3.28
1550 1975 5.681954 GCATGGCATTGTAATTAAGCTCCAA 60.682 40.000 0.00 0.00 0.00 3.53
1551 1976 4.202141 GCATGGCATTGTAATTAAGCTCCA 60.202 41.667 0.00 0.00 0.00 3.86
1552 1977 4.301628 GCATGGCATTGTAATTAAGCTCC 58.698 43.478 0.00 0.00 0.00 4.70
1553 1978 4.301628 GGCATGGCATTGTAATTAAGCTC 58.698 43.478 15.47 0.00 0.00 4.09
1554 1979 3.243501 CGGCATGGCATTGTAATTAAGCT 60.244 43.478 20.37 0.00 0.00 3.74
1555 1980 3.052036 CGGCATGGCATTGTAATTAAGC 58.948 45.455 20.37 0.00 0.00 3.09
1556 1981 4.566545 TCGGCATGGCATTGTAATTAAG 57.433 40.909 20.37 0.00 0.00 1.85
1557 1982 5.528043 AATCGGCATGGCATTGTAATTAA 57.472 34.783 20.37 0.00 0.00 1.40
1558 1983 5.288015 CAAATCGGCATGGCATTGTAATTA 58.712 37.500 20.37 0.00 0.00 1.40
1559 1984 4.121317 CAAATCGGCATGGCATTGTAATT 58.879 39.130 20.37 5.75 0.00 1.40
1560 1985 3.493002 CCAAATCGGCATGGCATTGTAAT 60.493 43.478 20.37 0.00 0.00 1.89
1561 1986 2.159128 CCAAATCGGCATGGCATTGTAA 60.159 45.455 20.37 0.00 0.00 2.41
1562 1987 1.408340 CCAAATCGGCATGGCATTGTA 59.592 47.619 20.37 0.00 0.00 2.41
1563 1988 0.176219 CCAAATCGGCATGGCATTGT 59.824 50.000 20.37 0.00 0.00 2.71
1564 1989 0.460722 TCCAAATCGGCATGGCATTG 59.539 50.000 20.37 18.57 36.62 2.82
1565 1990 0.748450 CTCCAAATCGGCATGGCATT 59.252 50.000 20.37 14.30 36.62 3.56
1579 2004 5.681954 GCATGGCATTGTAATTAAGCTCCAA 60.682 40.000 0.00 0.00 0.00 3.53
1582 2007 5.009410 AGAGCATGGCATTGTAATTAAGCTC 59.991 40.000 17.80 17.80 43.59 4.09
1585 2010 6.381481 TCAGAGCATGGCATTGTAATTAAG 57.619 37.500 0.00 0.00 0.00 1.85
1587 2012 6.321945 ACATTCAGAGCATGGCATTGTAATTA 59.678 34.615 0.00 0.00 0.00 1.40
1606 2031 2.496871 GCATTGACCATCCCAACATTCA 59.503 45.455 0.00 0.00 0.00 2.57
1608 2033 2.498481 CTGCATTGACCATCCCAACATT 59.502 45.455 0.00 0.00 0.00 2.71
1614 2039 1.312815 GCTACTGCATTGACCATCCC 58.687 55.000 0.00 0.00 39.41 3.85
1620 2045 3.118956 ACAGACTAGGCTACTGCATTGAC 60.119 47.826 0.00 0.00 41.91 3.18
1633 2058 5.337330 CCAAAACCCTACACTACAGACTAGG 60.337 48.000 0.00 0.00 0.00 3.02
1635 2060 5.396485 TCCAAAACCCTACACTACAGACTA 58.604 41.667 0.00 0.00 0.00 2.59
1667 2092 5.059833 CCTAAGAGCAAAACTTCACACTCT 58.940 41.667 0.00 0.00 36.08 3.24
1713 2138 6.964807 AATGGCAGCTACATTCATCAATTA 57.035 33.333 9.37 0.00 33.51 1.40
1714 2139 5.864418 AATGGCAGCTACATTCATCAATT 57.136 34.783 9.37 0.00 33.51 2.32
1726 2151 4.581824 GGATCAATCAGAAAATGGCAGCTA 59.418 41.667 0.00 0.00 0.00 3.32
1736 2163 7.287512 TGTGACATTTTGGATCAATCAGAAA 57.712 32.000 0.00 0.00 0.00 2.52
1760 2187 4.910304 ACCTCCCATTGCACTAGAGATAAT 59.090 41.667 0.00 0.00 0.00 1.28
1795 2222 5.685068 CGTAGCATGAACTCTATTGTCTGAG 59.315 44.000 0.00 0.00 36.47 3.35
1853 2280 4.941873 GGTAAACTTCAGTCCCATTACAGG 59.058 45.833 0.00 0.00 0.00 4.00
2010 2449 4.431416 ACACAACAGTGGGAACTAATGA 57.569 40.909 0.00 0.00 37.58 2.57
2081 2521 3.509575 TGCACAATCCACCTACAAATTCC 59.490 43.478 0.00 0.00 0.00 3.01
2106 2546 0.853530 AAGCCAAAGAGGTGGGAACT 59.146 50.000 0.00 0.00 39.26 3.01
2109 2549 1.228552 GCAAGCCAAAGAGGTGGGA 60.229 57.895 0.00 0.00 39.26 4.37
2111 2551 0.825010 ACTGCAAGCCAAAGAGGTGG 60.825 55.000 0.00 0.00 42.05 4.61
2112 2552 1.035139 AACTGCAAGCCAAAGAGGTG 58.965 50.000 0.00 0.00 40.61 4.00
2114 2554 1.269936 CCAAACTGCAAGCCAAAGAGG 60.270 52.381 0.00 0.00 37.60 3.69
2115 2555 1.410153 ACCAAACTGCAAGCCAAAGAG 59.590 47.619 0.00 0.00 37.60 2.85
2116 2556 1.136695 CACCAAACTGCAAGCCAAAGA 59.863 47.619 0.00 0.00 37.60 2.52
2117 2557 1.574134 CACCAAACTGCAAGCCAAAG 58.426 50.000 0.00 0.00 37.60 2.77
2118 2558 0.461693 GCACCAAACTGCAAGCCAAA 60.462 50.000 0.00 0.00 37.60 3.28
2119 2559 1.143620 GCACCAAACTGCAAGCCAA 59.856 52.632 0.00 0.00 37.60 4.52
2121 2561 0.598419 GAAGCACCAAACTGCAAGCC 60.598 55.000 0.00 0.00 39.86 4.35
2147 4113 5.283457 ACTGGATTAGAATAGTGCTGGAC 57.717 43.478 0.00 0.00 0.00 4.02
2156 4122 6.695624 TGGGGTTACCTACTGGATTAGAATA 58.304 40.000 0.00 0.00 41.11 1.75
2175 4141 5.775195 CCTTTCTTAAACATCTCTTTGGGGT 59.225 40.000 0.00 0.00 0.00 4.95
2190 4157 9.672673 CTAAAATCAGATCTCCACCTTTCTTAA 57.327 33.333 0.00 0.00 0.00 1.85
2198 4165 8.511604 TGAAAATCTAAAATCAGATCTCCACC 57.488 34.615 0.00 0.00 34.08 4.61
2200 4167 9.388506 GTCTGAAAATCTAAAATCAGATCTCCA 57.611 33.333 7.50 0.00 46.97 3.86
2209 4190 8.596380 CGTGGTCTAGTCTGAAAATCTAAAATC 58.404 37.037 0.00 0.00 0.00 2.17
2226 4207 2.688446 TCATAGCCTGAACGTGGTCTAG 59.312 50.000 0.00 0.00 0.00 2.43
2264 4249 8.519526 CCAAAAAGGTTATAAGCATTACACAGA 58.480 33.333 16.53 0.00 30.46 3.41
2265 4250 7.759433 CCCAAAAAGGTTATAAGCATTACACAG 59.241 37.037 16.53 1.56 30.53 3.66
2359 4344 4.771590 AGTGCCACATGTCAAATAACAG 57.228 40.909 0.00 0.00 31.50 3.16
2361 4346 5.982516 TGAAAAGTGCCACATGTCAAATAAC 59.017 36.000 0.00 0.00 0.00 1.89
2364 4349 4.669206 TGAAAAGTGCCACATGTCAAAT 57.331 36.364 0.00 0.00 0.00 2.32
2366 4351 4.462508 TTTGAAAAGTGCCACATGTCAA 57.537 36.364 1.65 1.65 0.00 3.18
2367 4352 4.669206 ATTTGAAAAGTGCCACATGTCA 57.331 36.364 0.00 0.00 0.00 3.58
2368 4353 5.772521 ACTATTTGAAAAGTGCCACATGTC 58.227 37.500 0.00 0.00 0.00 3.06
2550 4542 7.075121 CAACGTATGTTAAACAAGCATTGAGA 58.925 34.615 0.00 0.00 42.58 3.27
2568 4560 9.953697 TTGATAAAAACAAGCTAAACAACGTAT 57.046 25.926 0.00 0.00 0.00 3.06
2622 4617 4.023707 GTCTGAAAGGGACAAAGACACATG 60.024 45.833 0.00 0.00 37.72 3.21
2666 4661 1.808390 CCGGTAGTACTTGCCGCAC 60.808 63.158 24.47 7.65 43.70 5.34
2735 4730 4.986659 GCAAATGACAAATGAGCAAAGAGT 59.013 37.500 0.00 0.00 0.00 3.24
2741 4736 1.067706 CCGGCAAATGACAAATGAGCA 60.068 47.619 0.00 0.00 0.00 4.26
2743 4738 2.489329 ACTCCGGCAAATGACAAATGAG 59.511 45.455 0.00 0.00 0.00 2.90
2750 4745 2.812011 ACAAGTTACTCCGGCAAATGAC 59.188 45.455 0.00 0.00 0.00 3.06
2760 4755 3.572604 ACGCTCAGTACAAGTTACTCC 57.427 47.619 0.00 0.00 0.00 3.85
2761 4756 6.148264 AGTAAACGCTCAGTACAAGTTACTC 58.852 40.000 0.00 0.00 29.98 2.59
2762 4757 6.081872 AGTAAACGCTCAGTACAAGTTACT 57.918 37.500 0.00 0.75 30.64 2.24
2763 4758 6.031833 CGTAGTAAACGCTCAGTACAAGTTAC 59.968 42.308 0.00 0.00 46.10 2.50
2908 8269 2.719979 GCTCCGGCTCGATAACGA 59.280 61.111 0.00 0.00 46.56 3.85
2951 8312 2.880963 TGCCTTACAAAAACAGCCAC 57.119 45.000 0.00 0.00 0.00 5.01
3009 8373 2.376915 TTGCGCACAGTAAAAAGACG 57.623 45.000 11.12 0.00 0.00 4.18
3013 8377 3.717400 TCCAATTGCGCACAGTAAAAA 57.283 38.095 11.12 0.00 0.00 1.94
3020 8385 3.016031 ACTAATCATCCAATTGCGCACA 58.984 40.909 11.12 1.31 0.00 4.57
3063 8428 0.036010 CCGTTTCACTGGAGGAGCAT 60.036 55.000 0.00 0.00 0.00 3.79
3072 8438 6.780706 AGTTGTTATAGTTCCGTTTCACTG 57.219 37.500 0.00 0.00 0.00 3.66
3099 8465 4.379793 CACGCAATTCTTCACTTTAGCAAC 59.620 41.667 0.00 0.00 0.00 4.17
3101 8467 3.812609 TCACGCAATTCTTCACTTTAGCA 59.187 39.130 0.00 0.00 0.00 3.49
3108 8474 3.300009 CCAGTTTCACGCAATTCTTCAC 58.700 45.455 0.00 0.00 0.00 3.18
3136 8505 4.595762 AAGCAAAGATCACACAAGCATT 57.404 36.364 0.00 0.00 0.00 3.56
3147 8516 3.373439 ACGCATCTCTGAAAGCAAAGATC 59.627 43.478 0.00 0.00 0.00 2.75
3157 8526 0.815095 TCGCCTTACGCATCTCTGAA 59.185 50.000 0.00 0.00 43.23 3.02
3158 8527 1.032794 ATCGCCTTACGCATCTCTGA 58.967 50.000 0.00 0.00 43.23 3.27
3159 8528 2.226674 TCTATCGCCTTACGCATCTCTG 59.773 50.000 0.00 0.00 43.23 3.35
3169 8538 3.181397 CGAAAACCGTTCTATCGCCTTA 58.819 45.455 2.42 0.00 0.00 2.69
3194 8563 3.389329 CCAATGTCTACTCTACCATGGCT 59.611 47.826 13.04 1.45 0.00 4.75
3198 8567 6.779860 ACAAAACCAATGTCTACTCTACCAT 58.220 36.000 0.00 0.00 0.00 3.55
3199 8568 6.182507 ACAAAACCAATGTCTACTCTACCA 57.817 37.500 0.00 0.00 0.00 3.25
3211 8580 5.196825 GTTTCATCGCAAACAAAACCAATG 58.803 37.500 0.00 0.00 36.44 2.82
3238 8610 2.117156 GCGTGCCAGGCTTCATGAT 61.117 57.895 14.15 0.00 0.00 2.45
3246 8618 0.179163 GTGAAATTAGCGTGCCAGGC 60.179 55.000 3.66 3.66 0.00 4.85
3255 8627 2.901249 TCTGGCGGTAGTGAAATTAGC 58.099 47.619 0.00 0.00 0.00 3.09
3287 8659 3.807622 TCGTCAGTTTGGTGAAGCTTTAG 59.192 43.478 0.00 0.00 0.00 1.85
3289 8661 2.639065 TCGTCAGTTTGGTGAAGCTTT 58.361 42.857 0.00 0.00 0.00 3.51
3290 8662 2.325583 TCGTCAGTTTGGTGAAGCTT 57.674 45.000 0.00 0.00 0.00 3.74
3292 8664 1.197721 CCATCGTCAGTTTGGTGAAGC 59.802 52.381 0.00 0.00 0.00 3.86
3294 8666 2.631160 ACCATCGTCAGTTTGGTGAA 57.369 45.000 0.00 0.00 42.09 3.18
3297 8669 2.631160 TTCACCATCGTCAGTTTGGT 57.369 45.000 0.00 0.00 44.49 3.67
3298 8670 4.229096 CAAATTCACCATCGTCAGTTTGG 58.771 43.478 0.00 0.00 36.56 3.28
3299 8671 4.858935 ACAAATTCACCATCGTCAGTTTG 58.141 39.130 0.00 0.00 0.00 2.93
3300 8672 5.514274 AACAAATTCACCATCGTCAGTTT 57.486 34.783 0.00 0.00 0.00 2.66
3301 8673 5.048991 GGTAACAAATTCACCATCGTCAGTT 60.049 40.000 0.00 0.00 32.32 3.16
3302 8674 4.454504 GGTAACAAATTCACCATCGTCAGT 59.545 41.667 0.00 0.00 32.32 3.41
3303 8675 4.435518 CGGTAACAAATTCACCATCGTCAG 60.436 45.833 0.00 0.00 32.32 3.51
3304 8676 3.433957 CGGTAACAAATTCACCATCGTCA 59.566 43.478 0.00 0.00 32.32 4.35
3360 8732 5.833131 ACAAATAGGAAAGGAACACACATGT 59.167 36.000 0.00 0.00 42.46 3.21
3361 8733 6.331369 ACAAATAGGAAAGGAACACACATG 57.669 37.500 0.00 0.00 0.00 3.21
3362 8734 6.549364 TCAACAAATAGGAAAGGAACACACAT 59.451 34.615 0.00 0.00 0.00 3.21
3363 8735 5.888724 TCAACAAATAGGAAAGGAACACACA 59.111 36.000 0.00 0.00 0.00 3.72
3364 8736 6.385649 TCAACAAATAGGAAAGGAACACAC 57.614 37.500 0.00 0.00 0.00 3.82
3365 8737 6.775142 TCATCAACAAATAGGAAAGGAACACA 59.225 34.615 0.00 0.00 0.00 3.72
3366 8738 7.214467 TCATCAACAAATAGGAAAGGAACAC 57.786 36.000 0.00 0.00 0.00 3.32
3367 8739 7.669304 TCATCATCAACAAATAGGAAAGGAACA 59.331 33.333 0.00 0.00 0.00 3.18
3368 8740 8.055279 TCATCATCAACAAATAGGAAAGGAAC 57.945 34.615 0.00 0.00 0.00 3.62
3369 8741 8.689061 CATCATCATCAACAAATAGGAAAGGAA 58.311 33.333 0.00 0.00 0.00 3.36
3370 8742 7.201848 GCATCATCATCAACAAATAGGAAAGGA 60.202 37.037 0.00 0.00 0.00 3.36
3371 8743 6.921857 GCATCATCATCAACAAATAGGAAAGG 59.078 38.462 0.00 0.00 0.00 3.11
3372 8744 7.648112 CAGCATCATCATCAACAAATAGGAAAG 59.352 37.037 0.00 0.00 0.00 2.62
3373 8745 7.417003 CCAGCATCATCATCAACAAATAGGAAA 60.417 37.037 0.00 0.00 0.00 3.13
3374 8746 6.040054 CCAGCATCATCATCAACAAATAGGAA 59.960 38.462 0.00 0.00 0.00 3.36
3375 8747 5.533528 CCAGCATCATCATCAACAAATAGGA 59.466 40.000 0.00 0.00 0.00 2.94
3376 8748 5.278808 CCCAGCATCATCATCAACAAATAGG 60.279 44.000 0.00 0.00 0.00 2.57
3377 8749 5.278808 CCCCAGCATCATCATCAACAAATAG 60.279 44.000 0.00 0.00 0.00 1.73
3378 8750 4.585581 CCCCAGCATCATCATCAACAAATA 59.414 41.667 0.00 0.00 0.00 1.40
3379 8751 3.386726 CCCCAGCATCATCATCAACAAAT 59.613 43.478 0.00 0.00 0.00 2.32
3380 8752 2.761767 CCCCAGCATCATCATCAACAAA 59.238 45.455 0.00 0.00 0.00 2.83
3381 8753 2.380941 CCCCAGCATCATCATCAACAA 58.619 47.619 0.00 0.00 0.00 2.83
3382 8754 2.025344 GCCCCAGCATCATCATCAACA 61.025 52.381 0.00 0.00 39.53 3.33
3383 8755 0.672342 GCCCCAGCATCATCATCAAC 59.328 55.000 0.00 0.00 39.53 3.18
3384 8756 0.468585 GGCCCCAGCATCATCATCAA 60.469 55.000 0.00 0.00 42.56 2.57
3385 8757 1.152138 GGCCCCAGCATCATCATCA 59.848 57.895 0.00 0.00 42.56 3.07
3386 8758 1.605738 GGGCCCCAGCATCATCATC 60.606 63.158 12.23 0.00 42.56 2.92
3387 8759 1.736491 ATGGGCCCCAGCATCATCAT 61.736 55.000 22.27 0.00 42.56 2.45
3388 8760 2.361865 GATGGGCCCCAGCATCATCA 62.362 60.000 22.27 0.00 44.12 3.07
3389 8761 1.605738 GATGGGCCCCAGCATCATC 60.606 63.158 22.27 10.02 40.02 2.92
3390 8762 2.077842 GAGATGGGCCCCAGCATCAT 62.078 60.000 22.21 3.12 43.12 2.45
3391 8763 2.697263 AGATGGGCCCCAGCATCA 60.697 61.111 22.21 0.00 43.12 3.07
3392 8764 2.114838 GAGATGGGCCCCAGCATC 59.885 66.667 22.21 15.82 43.12 3.91
3393 8765 3.882326 CGAGATGGGCCCCAGCAT 61.882 66.667 22.21 5.46 43.12 3.79
3395 8767 3.564218 ATCGAGATGGGCCCCAGC 61.564 66.667 22.27 10.91 40.67 4.85
3396 8768 2.429058 CATCGAGATGGGCCCCAG 59.571 66.667 22.27 5.99 36.75 4.45
3397 8769 3.877450 GCATCGAGATGGGCCCCA 61.877 66.667 22.27 4.05 39.16 4.96
3398 8770 4.650377 GGCATCGAGATGGGCCCC 62.650 72.222 22.27 4.15 40.55 5.80
3399 8771 4.996434 CGGCATCGAGATGGGCCC 62.996 72.222 17.59 17.59 43.50 5.80
3400 8772 3.928779 TCGGCATCGAGATGGGCC 61.929 66.667 14.13 9.27 40.88 5.80
3401 8773 2.663188 GTCGGCATCGAGATGGGC 60.663 66.667 14.13 7.00 46.91 5.36
3402 8774 2.029666 GGTCGGCATCGAGATGGG 59.970 66.667 14.13 0.00 46.91 4.00
3403 8775 2.029666 GGGTCGGCATCGAGATGG 59.970 66.667 14.13 0.00 46.91 3.51
3404 8776 0.250038 AATGGGTCGGCATCGAGATG 60.250 55.000 8.62 8.62 46.91 2.90
3405 8777 1.000955 GTAATGGGTCGGCATCGAGAT 59.999 52.381 0.00 0.00 46.91 2.75
3406 8778 0.387929 GTAATGGGTCGGCATCGAGA 59.612 55.000 0.00 0.00 46.91 4.04
3407 8779 0.600255 GGTAATGGGTCGGCATCGAG 60.600 60.000 0.00 0.00 46.91 4.04
3408 8780 1.444250 GGTAATGGGTCGGCATCGA 59.556 57.895 0.00 0.00 43.86 3.59
3409 8781 1.597027 GGGTAATGGGTCGGCATCG 60.597 63.158 0.00 0.00 37.82 3.84
3413 8785 1.377594 AAACGGGTAATGGGTCGGC 60.378 57.895 0.00 0.00 0.00 5.54
3416 8788 0.609681 TGGCAAACGGGTAATGGGTC 60.610 55.000 0.00 0.00 0.00 4.46
3471 8843 3.953612 ACCTGTGCATGTCTCAAGAAAAA 59.046 39.130 0.00 0.00 0.00 1.94
3472 8844 3.316029 CACCTGTGCATGTCTCAAGAAAA 59.684 43.478 0.00 0.00 0.00 2.29
3473 8845 2.880268 CACCTGTGCATGTCTCAAGAAA 59.120 45.455 0.00 0.00 0.00 2.52
3474 8846 2.158769 ACACCTGTGCATGTCTCAAGAA 60.159 45.455 0.00 0.00 0.00 2.52
3475 8847 1.417517 ACACCTGTGCATGTCTCAAGA 59.582 47.619 0.00 0.00 0.00 3.02
3476 8848 1.888215 ACACCTGTGCATGTCTCAAG 58.112 50.000 0.00 0.00 0.00 3.02
3477 8849 3.337358 CATACACCTGTGCATGTCTCAA 58.663 45.455 2.88 0.00 31.41 3.02
3478 8850 2.355007 CCATACACCTGTGCATGTCTCA 60.355 50.000 9.11 0.00 33.56 3.27
3479 8851 2.283298 CCATACACCTGTGCATGTCTC 58.717 52.381 9.11 0.00 33.56 3.36
3480 8852 1.679944 GCCATACACCTGTGCATGTCT 60.680 52.381 9.11 0.00 33.56 3.41
3481 8853 0.734889 GCCATACACCTGTGCATGTC 59.265 55.000 9.11 0.00 33.56 3.06
3485 8857 1.675310 GCAGCCATACACCTGTGCA 60.675 57.895 0.00 0.00 0.00 4.57
3492 8864 0.179073 ATCGACCAGCAGCCATACAC 60.179 55.000 0.00 0.00 0.00 2.90
3508 8880 5.398603 ACCAGATGCTATTCTAGGAATCG 57.601 43.478 0.00 0.00 0.00 3.34
3585 8957 2.743538 GAGCAGCACCACGCATGA 60.744 61.111 0.00 0.00 46.13 3.07
3586 8958 2.745100 AGAGCAGCACCACGCATG 60.745 61.111 0.00 0.00 46.13 4.06
3587 8959 2.745100 CAGAGCAGCACCACGCAT 60.745 61.111 0.00 0.00 46.13 4.73
3592 8970 0.472044 TAAACACCAGAGCAGCACCA 59.528 50.000 0.00 0.00 0.00 4.17
3600 8978 5.578727 GTCAGCTTGTAGATAAACACCAGAG 59.421 44.000 0.00 0.00 0.00 3.35
3608 8986 5.584649 CCGAAATGGTCAGCTTGTAGATAAA 59.415 40.000 0.00 0.00 0.00 1.40
3609 8987 5.105106 TCCGAAATGGTCAGCTTGTAGATAA 60.105 40.000 0.00 0.00 39.52 1.75
3610 8988 4.404394 TCCGAAATGGTCAGCTTGTAGATA 59.596 41.667 0.00 0.00 39.52 1.98
3616 8994 3.270027 TGTATCCGAAATGGTCAGCTTG 58.730 45.455 0.00 0.00 39.52 4.01
3631 9009 8.812147 TGATGACGATTACAACTTATGTATCC 57.188 34.615 0.00 0.00 43.84 2.59
3636 9014 8.634475 TTCTCTGATGACGATTACAACTTATG 57.366 34.615 0.00 0.00 0.00 1.90
3638 9016 8.304596 ACTTTCTCTGATGACGATTACAACTTA 58.695 33.333 0.00 0.00 0.00 2.24
3639 9017 7.155328 ACTTTCTCTGATGACGATTACAACTT 58.845 34.615 0.00 0.00 0.00 2.66
3640 9018 6.692486 ACTTTCTCTGATGACGATTACAACT 58.308 36.000 0.00 0.00 0.00 3.16
3641 9019 6.952935 ACTTTCTCTGATGACGATTACAAC 57.047 37.500 0.00 0.00 0.00 3.32
3642 9020 7.827701 ACTACTTTCTCTGATGACGATTACAA 58.172 34.615 0.00 0.00 0.00 2.41
3643 9021 7.392494 ACTACTTTCTCTGATGACGATTACA 57.608 36.000 0.00 0.00 0.00 2.41
3648 9026 9.338622 TGAATATACTACTTTCTCTGATGACGA 57.661 33.333 0.00 0.00 0.00 4.20
3669 9047 9.610705 AGTACACTTACTAGAGACGAATGAATA 57.389 33.333 0.00 0.00 36.73 1.75
3670 9048 8.508883 AGTACACTTACTAGAGACGAATGAAT 57.491 34.615 0.00 0.00 36.73 2.57
3671 9049 7.918536 AGTACACTTACTAGAGACGAATGAA 57.081 36.000 0.00 0.00 36.73 2.57
3672 9050 7.918536 AAGTACACTTACTAGAGACGAATGA 57.081 36.000 0.00 0.00 37.59 2.57
3673 9051 8.336806 CCTAAGTACACTTACTAGAGACGAATG 58.663 40.741 0.00 0.00 37.59 2.67
3674 9052 8.263640 TCCTAAGTACACTTACTAGAGACGAAT 58.736 37.037 0.00 0.00 37.59 3.34
3675 9053 7.615403 TCCTAAGTACACTTACTAGAGACGAA 58.385 38.462 0.00 0.00 37.59 3.85
3676 9054 7.175347 TCCTAAGTACACTTACTAGAGACGA 57.825 40.000 0.00 0.00 37.59 4.20
3677 9055 7.840342 TTCCTAAGTACACTTACTAGAGACG 57.160 40.000 0.00 0.00 37.59 4.18
3678 9056 8.676401 CCTTTCCTAAGTACACTTACTAGAGAC 58.324 40.741 0.00 0.00 37.59 3.36
3679 9057 7.833183 CCCTTTCCTAAGTACACTTACTAGAGA 59.167 40.741 0.00 0.00 37.59 3.10
3680 9058 7.833183 TCCCTTTCCTAAGTACACTTACTAGAG 59.167 40.741 0.00 0.00 37.59 2.43
3681 9059 7.702785 TCCCTTTCCTAAGTACACTTACTAGA 58.297 38.462 0.00 0.00 37.59 2.43
3682 9060 7.951347 TCCCTTTCCTAAGTACACTTACTAG 57.049 40.000 0.00 0.00 37.59 2.57
3683 9061 8.725606 TTTCCCTTTCCTAAGTACACTTACTA 57.274 34.615 0.00 0.00 37.59 1.82
3684 9062 7.622502 TTTCCCTTTCCTAAGTACACTTACT 57.377 36.000 0.00 0.00 40.55 2.24
3685 9063 8.681486 TTTTTCCCTTTCCTAAGTACACTTAC 57.319 34.615 0.00 0.00 37.40 2.34
3686 9064 9.511272 GATTTTTCCCTTTCCTAAGTACACTTA 57.489 33.333 0.00 2.07 37.40 2.24
3687 9065 7.450634 GGATTTTTCCCTTTCCTAAGTACACTT 59.549 37.037 0.00 0.00 39.85 3.16
3688 9066 6.946583 GGATTTTTCCCTTTCCTAAGTACACT 59.053 38.462 0.00 0.00 0.00 3.55
3689 9067 6.128090 CGGATTTTTCCCTTTCCTAAGTACAC 60.128 42.308 0.00 0.00 0.00 2.90
3690 9068 5.941647 CGGATTTTTCCCTTTCCTAAGTACA 59.058 40.000 0.00 0.00 0.00 2.90
3691 9069 6.175471 TCGGATTTTTCCCTTTCCTAAGTAC 58.825 40.000 0.00 0.00 0.00 2.73
3692 9070 6.377245 TCGGATTTTTCCCTTTCCTAAGTA 57.623 37.500 0.00 0.00 0.00 2.24
3693 9071 5.251182 TCGGATTTTTCCCTTTCCTAAGT 57.749 39.130 0.00 0.00 0.00 2.24
3694 9072 5.475564 TGTTCGGATTTTTCCCTTTCCTAAG 59.524 40.000 0.00 0.00 0.00 2.18
3695 9073 5.242171 GTGTTCGGATTTTTCCCTTTCCTAA 59.758 40.000 0.00 0.00 0.00 2.69
3696 9074 4.763279 GTGTTCGGATTTTTCCCTTTCCTA 59.237 41.667 0.00 0.00 0.00 2.94
3697 9075 3.572682 GTGTTCGGATTTTTCCCTTTCCT 59.427 43.478 0.00 0.00 0.00 3.36
3698 9076 3.319689 TGTGTTCGGATTTTTCCCTTTCC 59.680 43.478 0.00 0.00 0.00 3.13
3699 9077 4.577834 TGTGTTCGGATTTTTCCCTTTC 57.422 40.909 0.00 0.00 0.00 2.62
3700 9078 5.545063 ATTGTGTTCGGATTTTTCCCTTT 57.455 34.783 0.00 0.00 0.00 3.11
3701 9079 6.850752 ATATTGTGTTCGGATTTTTCCCTT 57.149 33.333 0.00 0.00 0.00 3.95
3702 9080 6.850752 AATATTGTGTTCGGATTTTTCCCT 57.149 33.333 0.00 0.00 0.00 4.20
3703 9081 7.992008 TCTAATATTGTGTTCGGATTTTTCCC 58.008 34.615 0.00 0.00 0.00 3.97
3704 9082 9.503427 CTTCTAATATTGTGTTCGGATTTTTCC 57.497 33.333 0.00 0.00 0.00 3.13
3705 9083 9.010366 GCTTCTAATATTGTGTTCGGATTTTTC 57.990 33.333 0.00 0.00 0.00 2.29
3706 9084 7.973944 GGCTTCTAATATTGTGTTCGGATTTTT 59.026 33.333 0.00 0.00 0.00 1.94
3707 9085 7.480810 GGCTTCTAATATTGTGTTCGGATTTT 58.519 34.615 0.00 0.00 0.00 1.82
3708 9086 6.238374 CGGCTTCTAATATTGTGTTCGGATTT 60.238 38.462 0.00 0.00 0.00 2.17
3709 9087 5.236478 CGGCTTCTAATATTGTGTTCGGATT 59.764 40.000 0.00 0.00 0.00 3.01
3710 9088 4.750098 CGGCTTCTAATATTGTGTTCGGAT 59.250 41.667 0.00 0.00 0.00 4.18
3711 9089 4.116961 CGGCTTCTAATATTGTGTTCGGA 58.883 43.478 0.00 0.00 0.00 4.55
3712 9090 3.247648 CCGGCTTCTAATATTGTGTTCGG 59.752 47.826 0.00 1.44 0.00 4.30
3713 9091 4.116961 TCCGGCTTCTAATATTGTGTTCG 58.883 43.478 0.00 0.00 0.00 3.95
3714 9092 7.724305 TTATCCGGCTTCTAATATTGTGTTC 57.276 36.000 0.00 0.00 0.00 3.18
3715 9093 9.959721 ATATTATCCGGCTTCTAATATTGTGTT 57.040 29.630 0.00 0.00 28.38 3.32
3716 9094 9.601217 GATATTATCCGGCTTCTAATATTGTGT 57.399 33.333 0.00 0.00 31.44 3.72
3717 9095 9.823647 AGATATTATCCGGCTTCTAATATTGTG 57.176 33.333 0.00 0.00 31.44 3.33
3721 9099 8.516234 CGCTAGATATTATCCGGCTTCTAATAT 58.484 37.037 0.00 7.27 33.08 1.28
3722 9100 7.501559 ACGCTAGATATTATCCGGCTTCTAATA 59.498 37.037 0.00 2.56 0.00 0.98
3723 9101 6.321690 ACGCTAGATATTATCCGGCTTCTAAT 59.678 38.462 0.00 0.21 0.00 1.73
3724 9102 5.651139 ACGCTAGATATTATCCGGCTTCTAA 59.349 40.000 0.00 0.00 0.00 2.10
3725 9103 5.066117 CACGCTAGATATTATCCGGCTTCTA 59.934 44.000 0.00 0.00 0.00 2.10
3726 9104 4.017808 ACGCTAGATATTATCCGGCTTCT 58.982 43.478 0.00 0.00 0.00 2.85
3727 9105 4.106197 CACGCTAGATATTATCCGGCTTC 58.894 47.826 0.00 0.00 0.00 3.86
3728 9106 3.119101 CCACGCTAGATATTATCCGGCTT 60.119 47.826 0.00 0.00 0.00 4.35
3729 9107 2.427453 CCACGCTAGATATTATCCGGCT 59.573 50.000 0.00 0.00 0.00 5.52
3730 9108 2.165845 ACCACGCTAGATATTATCCGGC 59.834 50.000 0.00 4.65 0.00 6.13
3731 9109 4.880120 TCTACCACGCTAGATATTATCCGG 59.120 45.833 0.00 0.00 0.00 5.14
3732 9110 5.585445 ACTCTACCACGCTAGATATTATCCG 59.415 44.000 0.00 0.51 0.00 4.18
3733 9111 6.238157 CGACTCTACCACGCTAGATATTATCC 60.238 46.154 0.00 0.00 0.00 2.59
3734 9112 6.707711 CGACTCTACCACGCTAGATATTATC 58.292 44.000 0.00 0.00 0.00 1.75
3735 9113 6.665474 CGACTCTACCACGCTAGATATTAT 57.335 41.667 0.00 0.00 0.00 1.28
3746 9124 0.733150 TCATCAGCGACTCTACCACG 59.267 55.000 0.00 0.00 0.00 4.94
3747 9125 1.472878 TGTCATCAGCGACTCTACCAC 59.527 52.381 0.00 0.00 36.82 4.16
3748 9126 1.834188 TGTCATCAGCGACTCTACCA 58.166 50.000 0.00 0.00 36.82 3.25
3749 9127 4.569761 TTATGTCATCAGCGACTCTACC 57.430 45.455 0.00 0.00 36.82 3.18
3750 9128 6.920758 AGAATTTATGTCATCAGCGACTCTAC 59.079 38.462 0.00 0.00 36.82 2.59
3751 9129 7.043961 AGAATTTATGTCATCAGCGACTCTA 57.956 36.000 0.00 0.00 36.82 2.43
3752 9130 5.911752 AGAATTTATGTCATCAGCGACTCT 58.088 37.500 0.00 0.00 36.82 3.24
3753 9131 6.417327 CAAGAATTTATGTCATCAGCGACTC 58.583 40.000 0.00 0.00 36.82 3.36
3754 9132 5.220739 GCAAGAATTTATGTCATCAGCGACT 60.221 40.000 0.00 0.00 36.82 4.18
3755 9133 4.966366 GCAAGAATTTATGTCATCAGCGAC 59.034 41.667 0.00 0.00 36.40 5.19
3756 9134 4.877823 AGCAAGAATTTATGTCATCAGCGA 59.122 37.500 0.00 0.00 0.00 4.93
3757 9135 5.165911 AGCAAGAATTTATGTCATCAGCG 57.834 39.130 0.00 0.00 0.00 5.18
3758 9136 5.066893 TGGAGCAAGAATTTATGTCATCAGC 59.933 40.000 0.00 0.00 0.00 4.26
3759 9137 6.688637 TGGAGCAAGAATTTATGTCATCAG 57.311 37.500 0.00 0.00 0.00 2.90
3760 9138 6.405065 GCTTGGAGCAAGAATTTATGTCATCA 60.405 38.462 0.00 0.00 43.42 3.07
3761 9139 5.975939 GCTTGGAGCAAGAATTTATGTCATC 59.024 40.000 0.00 0.00 43.42 2.92
3762 9140 5.655532 AGCTTGGAGCAAGAATTTATGTCAT 59.344 36.000 0.00 0.00 45.56 3.06
3763 9141 5.012239 AGCTTGGAGCAAGAATTTATGTCA 58.988 37.500 0.00 0.00 45.56 3.58
3764 9142 5.573337 AGCTTGGAGCAAGAATTTATGTC 57.427 39.130 0.00 0.00 45.56 3.06
3801 9179 4.872691 GCTCAAATTCATCTTCCGAGAGAA 59.127 41.667 0.00 0.00 34.85 2.87
3802 9180 4.161189 AGCTCAAATTCATCTTCCGAGAGA 59.839 41.667 0.00 0.00 34.85 3.10
3803 9181 4.440880 AGCTCAAATTCATCTTCCGAGAG 58.559 43.478 0.00 0.00 34.85 3.20
3804 9182 4.478206 AGCTCAAATTCATCTTCCGAGA 57.522 40.909 0.00 0.00 36.09 4.04
3805 9183 4.034975 GGAAGCTCAAATTCATCTTCCGAG 59.965 45.833 10.80 0.00 42.05 4.63
3806 9184 3.941483 GGAAGCTCAAATTCATCTTCCGA 59.059 43.478 10.80 0.00 42.05 4.55
3807 9185 4.284378 GGAAGCTCAAATTCATCTTCCG 57.716 45.455 10.80 0.00 42.05 4.30
3809 9187 4.142293 GGTGGGAAGCTCAAATTCATCTTC 60.142 45.833 0.00 0.00 34.12 2.87
3810 9188 3.766051 GGTGGGAAGCTCAAATTCATCTT 59.234 43.478 0.00 0.00 0.00 2.40
3811 9189 3.011032 AGGTGGGAAGCTCAAATTCATCT 59.989 43.478 0.00 0.00 0.00 2.90
3812 9190 3.359950 AGGTGGGAAGCTCAAATTCATC 58.640 45.455 0.00 0.00 0.00 2.92
3813 9191 3.463048 AGGTGGGAAGCTCAAATTCAT 57.537 42.857 0.00 0.00 0.00 2.57
3814 9192 2.978156 AGGTGGGAAGCTCAAATTCA 57.022 45.000 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.