Multiple sequence alignment - TraesCS7D01G477300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G477300 chr7D 100.000 2429 0 0 1 2429 588433518 588431090 0.000000e+00 4486
1 TraesCS7D01G477300 chr7D 91.480 1162 75 10 278 1430 588540261 588541407 0.000000e+00 1576
2 TraesCS7D01G477300 chr7D 90.396 833 66 7 607 1430 588538591 588539418 0.000000e+00 1083
3 TraesCS7D01G477300 chr7D 83.776 715 71 25 726 1430 596092623 596093302 9.470000e-179 636
4 TraesCS7D01G477300 chr7D 88.636 440 46 3 130 569 588537488 588537923 1.280000e-147 532
5 TraesCS7D01G477300 chr7D 91.463 246 18 3 1 246 588540022 588540264 3.870000e-88 335
6 TraesCS7D01G477300 chr7D 90.580 138 13 0 1 138 588528803 588528940 1.480000e-42 183
7 TraesCS7D01G477300 chr7D 90.517 116 10 1 1711 1825 588409930 588410045 4.180000e-33 152
8 TraesCS7D01G477300 chr7B 84.000 1350 131 42 666 1944 662465364 662466699 0.000000e+00 1218
9 TraesCS7D01G477300 chr7B 86.278 1115 78 34 953 2034 662010009 662008937 0.000000e+00 1142
10 TraesCS7D01G477300 chr7B 90.931 816 57 10 642 1447 662651028 662651836 0.000000e+00 1081
11 TraesCS7D01G477300 chr7B 79.342 1186 136 67 745 1878 661716439 661717567 0.000000e+00 732
12 TraesCS7D01G477300 chr7B 90.612 490 22 13 952 1430 662311532 662311056 1.590000e-176 628
13 TraesCS7D01G477300 chr7B 82.730 718 81 31 727 1430 674194077 674194765 1.240000e-167 599
14 TraesCS7D01G477300 chr7B 88.339 283 30 2 271 553 662464930 662465209 1.080000e-88 337
15 TraesCS7D01G477300 chr7B 92.444 225 15 2 1 225 662464707 662464929 1.080000e-83 320
16 TraesCS7D01G477300 chr7B 91.753 97 8 0 1812 1908 661999745 661999841 4.210000e-28 135
17 TraesCS7D01G477300 chr7A 92.270 815 47 8 628 1430 680324934 680325744 0.000000e+00 1142
18 TraesCS7D01G477300 chr7A 81.864 1180 122 52 728 1871 680264795 680263672 0.000000e+00 909
19 TraesCS7D01G477300 chr4D 90.226 133 13 0 101 233 30747054 30746922 8.930000e-40 174
20 TraesCS7D01G477300 chr5D 88.000 150 11 2 91 233 289502850 289502999 1.150000e-38 171
21 TraesCS7D01G477300 chr3A 88.732 142 13 3 94 233 746684191 746684051 1.150000e-38 171
22 TraesCS7D01G477300 chr6D 91.129 124 8 3 112 233 49847170 49847048 5.370000e-37 165
23 TraesCS7D01G477300 chr3D 90.984 122 11 0 112 233 297246916 297246795 5.370000e-37 165
24 TraesCS7D01G477300 chr5B 87.234 141 16 2 94 233 382667510 382667371 2.500000e-35 159
25 TraesCS7D01G477300 chr3B 93.407 91 5 1 1 91 637519172 637519083 1.520000e-27 134


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G477300 chr7D 588431090 588433518 2428 True 4486.0 4486 100.00000 1 2429 1 chr7D.!!$R1 2428
1 TraesCS7D01G477300 chr7D 588537488 588541407 3919 False 881.5 1576 90.49375 1 1430 4 chr7D.!!$F4 1429
2 TraesCS7D01G477300 chr7D 596092623 596093302 679 False 636.0 636 83.77600 726 1430 1 chr7D.!!$F3 704
3 TraesCS7D01G477300 chr7B 662008937 662010009 1072 True 1142.0 1142 86.27800 953 2034 1 chr7B.!!$R1 1081
4 TraesCS7D01G477300 chr7B 662651028 662651836 808 False 1081.0 1081 90.93100 642 1447 1 chr7B.!!$F3 805
5 TraesCS7D01G477300 chr7B 661716439 661717567 1128 False 732.0 732 79.34200 745 1878 1 chr7B.!!$F1 1133
6 TraesCS7D01G477300 chr7B 662464707 662466699 1992 False 625.0 1218 88.26100 1 1944 3 chr7B.!!$F5 1943
7 TraesCS7D01G477300 chr7B 674194077 674194765 688 False 599.0 599 82.73000 727 1430 1 chr7B.!!$F4 703
8 TraesCS7D01G477300 chr7A 680324934 680325744 810 False 1142.0 1142 92.27000 628 1430 1 chr7A.!!$F1 802
9 TraesCS7D01G477300 chr7A 680263672 680264795 1123 True 909.0 909 81.86400 728 1871 1 chr7A.!!$R1 1143

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
527 3072 0.031721 CCGTCCGCCTGTACCTATTC 59.968 60.0 0.0 0.0 0.0 1.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2386 5209 0.035881 CAGTTGAGCCAGCAGAAGGA 59.964 55.0 0.0 0.0 0.0 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 2574 1.893137 TGCTCGTGACATTCTACCTGT 59.107 47.619 0.00 0.00 0.00 4.00
91 2626 5.111293 GCTTTGCCTGCACATAATACATTT 58.889 37.500 0.00 0.00 0.00 2.32
92 2627 5.581874 GCTTTGCCTGCACATAATACATTTT 59.418 36.000 0.00 0.00 0.00 1.82
97 2632 7.606349 TGCCTGCACATAATACATTTTTGTTA 58.394 30.769 0.00 0.00 0.00 2.41
99 2634 7.973388 GCCTGCACATAATACATTTTTGTTAGA 59.027 33.333 0.00 0.00 0.00 2.10
172 2707 2.160615 TGCATAAACGGTTTGGATCACG 59.839 45.455 16.05 0.00 0.00 4.35
208 2743 1.743958 GAGTAGCAGCGGAAGTAGACA 59.256 52.381 0.00 0.00 0.00 3.41
225 2760 7.400599 AGTAGACAAATCGGTGTAGATTGTA 57.599 36.000 0.00 0.00 40.39 2.41
226 2761 7.256286 AGTAGACAAATCGGTGTAGATTGTAC 58.744 38.462 0.00 0.00 40.39 2.90
227 2762 6.282199 AGACAAATCGGTGTAGATTGTACT 57.718 37.500 0.00 0.00 40.39 2.73
228 2763 6.698380 AGACAAATCGGTGTAGATTGTACTT 58.302 36.000 0.00 0.00 40.39 2.24
229 2764 6.590292 AGACAAATCGGTGTAGATTGTACTTG 59.410 38.462 0.00 0.00 40.39 3.16
230 2765 5.642063 ACAAATCGGTGTAGATTGTACTTGG 59.358 40.000 0.00 0.00 40.39 3.61
231 2766 5.670792 AATCGGTGTAGATTGTACTTGGA 57.329 39.130 0.00 0.00 39.19 3.53
232 2767 4.713824 TCGGTGTAGATTGTACTTGGAG 57.286 45.455 0.00 0.00 0.00 3.86
233 2768 3.119245 TCGGTGTAGATTGTACTTGGAGC 60.119 47.826 0.00 0.00 0.00 4.70
234 2769 3.368013 CGGTGTAGATTGTACTTGGAGCA 60.368 47.826 0.00 0.00 0.00 4.26
235 2770 4.680708 CGGTGTAGATTGTACTTGGAGCAT 60.681 45.833 0.00 0.00 0.00 3.79
236 2771 4.572389 GGTGTAGATTGTACTTGGAGCATG 59.428 45.833 0.00 0.00 0.00 4.06
237 2772 4.572389 GTGTAGATTGTACTTGGAGCATGG 59.428 45.833 0.00 0.00 0.00 3.66
238 2773 4.469586 TGTAGATTGTACTTGGAGCATGGA 59.530 41.667 0.00 0.00 0.00 3.41
239 2774 4.148128 AGATTGTACTTGGAGCATGGAG 57.852 45.455 0.00 0.00 0.00 3.86
240 2775 3.776969 AGATTGTACTTGGAGCATGGAGA 59.223 43.478 0.00 0.00 0.00 3.71
241 2776 3.616956 TTGTACTTGGAGCATGGAGAG 57.383 47.619 0.00 0.00 0.00 3.20
242 2777 1.833630 TGTACTTGGAGCATGGAGAGG 59.166 52.381 0.00 0.00 0.00 3.69
243 2778 1.139853 GTACTTGGAGCATGGAGAGGG 59.860 57.143 0.00 0.00 0.00 4.30
244 2779 0.252881 ACTTGGAGCATGGAGAGGGA 60.253 55.000 0.00 0.00 0.00 4.20
245 2780 0.469070 CTTGGAGCATGGAGAGGGAG 59.531 60.000 0.00 0.00 0.00 4.30
246 2781 0.043183 TTGGAGCATGGAGAGGGAGA 59.957 55.000 0.00 0.00 0.00 3.71
247 2782 0.043183 TGGAGCATGGAGAGGGAGAA 59.957 55.000 0.00 0.00 0.00 2.87
248 2783 1.207791 GGAGCATGGAGAGGGAGAAA 58.792 55.000 0.00 0.00 0.00 2.52
249 2784 1.773653 GGAGCATGGAGAGGGAGAAAT 59.226 52.381 0.00 0.00 0.00 2.17
250 2785 2.486907 GGAGCATGGAGAGGGAGAAATG 60.487 54.545 0.00 0.00 0.00 2.32
251 2786 1.493871 AGCATGGAGAGGGAGAAATGG 59.506 52.381 0.00 0.00 0.00 3.16
252 2787 1.478288 GCATGGAGAGGGAGAAATGGG 60.478 57.143 0.00 0.00 0.00 4.00
253 2788 1.144503 CATGGAGAGGGAGAAATGGGG 59.855 57.143 0.00 0.00 0.00 4.96
254 2789 0.624500 TGGAGAGGGAGAAATGGGGG 60.625 60.000 0.00 0.00 0.00 5.40
255 2790 1.534203 GAGAGGGAGAAATGGGGGC 59.466 63.158 0.00 0.00 0.00 5.80
256 2791 1.230281 AGAGGGAGAAATGGGGGCA 60.230 57.895 0.00 0.00 0.00 5.36
257 2792 0.850883 AGAGGGAGAAATGGGGGCAA 60.851 55.000 0.00 0.00 0.00 4.52
258 2793 0.684479 GAGGGAGAAATGGGGGCAAC 60.684 60.000 0.00 0.00 0.00 4.17
375 2920 4.324991 GGTCCCGCCCGTCAGTTT 62.325 66.667 0.00 0.00 0.00 2.66
378 2923 2.046314 CCCGCCCGTCAGTTTGAT 60.046 61.111 0.00 0.00 0.00 2.57
442 2987 1.001120 TGAGTATGAGGGGTGCCGA 59.999 57.895 0.00 0.00 0.00 5.54
449 2994 1.749258 GAGGGGTGCCGAACAATCC 60.749 63.158 0.00 0.00 0.00 3.01
452 2997 2.700773 GGGTGCCGAACAATCCAGC 61.701 63.158 0.00 0.00 0.00 4.85
456 3001 2.750888 GCCGAACAATCCAGCCGTC 61.751 63.158 0.00 0.00 0.00 4.79
517 3062 2.767505 GATTTTATGATCCGTCCGCCT 58.232 47.619 0.00 0.00 0.00 5.52
519 3064 0.828022 TTTATGATCCGTCCGCCTGT 59.172 50.000 0.00 0.00 0.00 4.00
527 3072 0.031721 CCGTCCGCCTGTACCTATTC 59.968 60.000 0.00 0.00 0.00 1.75
545 3090 5.013183 CCTATTCGGGAGGTTTGAGGAATAT 59.987 44.000 0.00 0.00 0.00 1.28
546 3091 6.212791 CCTATTCGGGAGGTTTGAGGAATATA 59.787 42.308 0.00 0.00 0.00 0.86
547 3092 4.950205 TCGGGAGGTTTGAGGAATATAC 57.050 45.455 0.00 0.00 0.00 1.47
548 3093 3.319972 TCGGGAGGTTTGAGGAATATACG 59.680 47.826 0.00 0.00 0.00 3.06
549 3094 3.319972 CGGGAGGTTTGAGGAATATACGA 59.680 47.826 0.00 0.00 0.00 3.43
550 3095 4.021368 CGGGAGGTTTGAGGAATATACGAT 60.021 45.833 0.00 0.00 0.00 3.73
552 3097 6.294899 CGGGAGGTTTGAGGAATATACGATTA 60.295 42.308 0.00 0.00 0.00 1.75
553 3098 6.872547 GGGAGGTTTGAGGAATATACGATTAC 59.127 42.308 0.00 0.00 0.00 1.89
563 3108 5.972382 GGAATATACGATTACGGATGCTCTC 59.028 44.000 0.00 0.00 43.42 3.20
571 3116 5.163652 CGATTACGGATGCTCTCATACCATA 60.164 44.000 0.00 0.00 35.72 2.74
574 3119 4.825422 ACGGATGCTCTCATACCATATTG 58.175 43.478 0.00 0.00 31.96 1.90
593 3138 5.545658 ATTGTCATTGCGTCTTATTTCGT 57.454 34.783 0.00 0.00 0.00 3.85
594 3139 5.351233 TTGTCATTGCGTCTTATTTCGTT 57.649 34.783 0.00 0.00 0.00 3.85
595 3140 4.707563 TGTCATTGCGTCTTATTTCGTTG 58.292 39.130 0.00 0.00 0.00 4.10
596 3141 4.449405 TGTCATTGCGTCTTATTTCGTTGA 59.551 37.500 0.00 0.00 0.00 3.18
597 3142 5.121611 TGTCATTGCGTCTTATTTCGTTGAT 59.878 36.000 0.00 0.00 0.00 2.57
598 3143 6.021596 GTCATTGCGTCTTATTTCGTTGATT 58.978 36.000 0.00 0.00 0.00 2.57
618 3163 4.695217 TTTTGATTTGCTCCGGTATGAC 57.305 40.909 0.00 0.00 0.00 3.06
670 3301 1.802136 GCTCTTCGTCAGCTGAGATGG 60.802 57.143 18.89 8.43 33.75 3.51
688 3319 2.449464 TGGCAGATGGATGGAAAACAG 58.551 47.619 0.00 0.00 0.00 3.16
708 3339 0.178975 TCACACCCAAAATTCCCGCT 60.179 50.000 0.00 0.00 0.00 5.52
828 3460 4.837972 TGATATCTCTCGATCGATCACCT 58.162 43.478 24.40 5.50 0.00 4.00
878 3510 0.392193 CTCCAATCAGAGCGCACCTT 60.392 55.000 11.47 0.00 0.00 3.50
881 3513 1.446907 CAATCAGAGCGCACCTTCTT 58.553 50.000 11.47 0.00 0.00 2.52
968 3615 1.890041 CACCTTCCGGCGAAACACA 60.890 57.895 9.30 0.00 0.00 3.72
1314 3997 0.605319 CCCGCTACAACAAGAAGCCA 60.605 55.000 0.00 0.00 32.50 4.75
1347 4030 3.823369 GGAGATCCAGACCTCCGTA 57.177 57.895 0.00 0.00 39.49 4.02
1431 4114 2.498078 CAAGTTCACCTCCTCCTAGACC 59.502 54.545 0.00 0.00 0.00 3.85
1455 4163 3.921021 CGATGGTTCTCTGTAACAGTCAC 59.079 47.826 0.00 0.00 32.61 3.67
1559 4268 3.755378 GCTTCTTTGATCTGTGTCATGGT 59.245 43.478 0.00 0.00 0.00 3.55
1561 4270 5.412594 GCTTCTTTGATCTGTGTCATGGTTA 59.587 40.000 0.00 0.00 0.00 2.85
1581 4296 8.267620 TGGTTATGTATCATGTTCAGTTCTTG 57.732 34.615 0.00 0.00 0.00 3.02
1601 4322 1.079127 CCCCGTCGCTTCACTTGAT 60.079 57.895 0.00 0.00 0.00 2.57
1602 4323 1.084370 CCCCGTCGCTTCACTTGATC 61.084 60.000 0.00 0.00 0.00 2.92
1604 4325 0.994995 CCGTCGCTTCACTTGATCTG 59.005 55.000 0.00 0.00 0.00 2.90
1605 4326 1.670087 CCGTCGCTTCACTTGATCTGT 60.670 52.381 0.00 0.00 0.00 3.41
1606 4327 1.388093 CGTCGCTTCACTTGATCTGTG 59.612 52.381 11.47 11.47 36.82 3.66
1607 4328 2.408050 GTCGCTTCACTTGATCTGTGT 58.592 47.619 15.41 0.94 36.83 3.72
1608 4329 2.410053 GTCGCTTCACTTGATCTGTGTC 59.590 50.000 15.41 8.21 36.83 3.67
1609 4330 2.035832 TCGCTTCACTTGATCTGTGTCA 59.964 45.455 15.41 6.61 36.83 3.58
1610 4331 2.998670 CGCTTCACTTGATCTGTGTCAT 59.001 45.455 15.41 0.00 36.83 3.06
1611 4332 3.181523 CGCTTCACTTGATCTGTGTCATG 60.182 47.826 15.41 0.00 36.83 3.07
1616 4337 3.438087 CACTTGATCTGTGTCATGGTTCC 59.562 47.826 10.05 0.00 0.00 3.62
1627 4351 3.713248 TGTCATGGTTCCTGCTATGATCT 59.287 43.478 0.00 0.00 38.34 2.75
1650 4392 5.991328 TGTTTGTGTGAGTTCTGAATCTC 57.009 39.130 10.90 10.90 0.00 2.75
1651 4393 4.816385 TGTTTGTGTGAGTTCTGAATCTCC 59.184 41.667 13.60 8.35 0.00 3.71
1652 4394 4.687901 TTGTGTGAGTTCTGAATCTCCA 57.312 40.909 13.60 9.99 0.00 3.86
1653 4395 4.687901 TGTGTGAGTTCTGAATCTCCAA 57.312 40.909 13.60 4.01 0.00 3.53
1654 4396 4.380531 TGTGTGAGTTCTGAATCTCCAAC 58.619 43.478 13.60 12.22 0.00 3.77
1655 4397 4.101585 TGTGTGAGTTCTGAATCTCCAACT 59.898 41.667 13.60 0.00 0.00 3.16
1656 4398 5.059833 GTGTGAGTTCTGAATCTCCAACTT 58.940 41.667 13.60 0.00 0.00 2.66
1657 4399 5.178438 GTGTGAGTTCTGAATCTCCAACTTC 59.822 44.000 13.60 0.00 0.00 3.01
1658 4400 5.070981 TGTGAGTTCTGAATCTCCAACTTCT 59.929 40.000 13.60 0.00 0.00 2.85
1659 4401 5.994668 GTGAGTTCTGAATCTCCAACTTCTT 59.005 40.000 13.60 0.00 0.00 2.52
1660 4402 6.484977 GTGAGTTCTGAATCTCCAACTTCTTT 59.515 38.462 13.60 0.00 0.00 2.52
1661 4403 7.012799 GTGAGTTCTGAATCTCCAACTTCTTTT 59.987 37.037 13.60 0.00 0.00 2.27
1662 4404 8.210946 TGAGTTCTGAATCTCCAACTTCTTTTA 58.789 33.333 13.60 0.00 0.00 1.52
1663 4405 9.225436 GAGTTCTGAATCTCCAACTTCTTTTAT 57.775 33.333 0.00 0.00 0.00 1.40
1664 4406 9.007901 AGTTCTGAATCTCCAACTTCTTTTATG 57.992 33.333 0.00 0.00 0.00 1.90
1665 4407 7.383102 TCTGAATCTCCAACTTCTTTTATGC 57.617 36.000 0.00 0.00 0.00 3.14
1666 4408 7.170965 TCTGAATCTCCAACTTCTTTTATGCT 58.829 34.615 0.00 0.00 0.00 3.79
1667 4409 8.321353 TCTGAATCTCCAACTTCTTTTATGCTA 58.679 33.333 0.00 0.00 0.00 3.49
1668 4410 9.118300 CTGAATCTCCAACTTCTTTTATGCTAT 57.882 33.333 0.00 0.00 0.00 2.97
1676 4418 8.243426 CCAACTTCTTTTATGCTATGCAACTTA 58.757 33.333 0.00 0.00 43.62 2.24
1682 4424 8.955388 TCTTTTATGCTATGCAACTTATGTTCA 58.045 29.630 0.00 0.00 43.62 3.18
1693 4443 5.570589 GCAACTTATGTTCAGATTTGTGAGC 59.429 40.000 0.00 0.00 33.52 4.26
1707 4459 1.561076 TGTGAGCATGGCCTCTGTAAT 59.439 47.619 3.32 0.00 33.02 1.89
1752 4510 6.919662 TGAATTTGCAAAGATGTTTCTCTGTC 59.080 34.615 18.19 0.00 0.00 3.51
1753 4511 6.645790 ATTTGCAAAGATGTTTCTCTGTCT 57.354 33.333 18.19 0.00 0.00 3.41
1754 4512 5.428496 TTGCAAAGATGTTTCTCTGTCTG 57.572 39.130 0.00 0.00 0.00 3.51
1786 4545 6.385649 TTTCAGTTTTCAGCTATCGGTTTT 57.614 33.333 0.00 0.00 0.00 2.43
1787 4546 7.499321 TTTCAGTTTTCAGCTATCGGTTTTA 57.501 32.000 0.00 0.00 0.00 1.52
1795 4554 3.031736 AGCTATCGGTTTTAGAGGCTGA 58.968 45.455 0.00 0.00 32.43 4.26
1797 4556 4.101741 AGCTATCGGTTTTAGAGGCTGATT 59.898 41.667 0.00 0.00 32.43 2.57
1945 4768 5.598830 GGAGATAGACCCAGTTTCAGTCATA 59.401 44.000 0.00 0.00 32.82 2.15
1963 4786 1.271840 TAGGATGGCCGTCCTTGCTT 61.272 55.000 44.06 26.36 46.45 3.91
1973 4796 0.962855 GTCCTTGCTTCAGCCCTTCC 60.963 60.000 0.00 0.00 41.18 3.46
1974 4797 1.136329 TCCTTGCTTCAGCCCTTCCT 61.136 55.000 0.00 0.00 41.18 3.36
1975 4798 0.251519 CCTTGCTTCAGCCCTTCCTT 60.252 55.000 0.00 0.00 41.18 3.36
1977 4800 0.773644 TTGCTTCAGCCCTTCCTTCT 59.226 50.000 0.00 0.00 41.18 2.85
1981 4804 0.326264 TTCAGCCCTTCCTTCTGCTC 59.674 55.000 0.00 0.00 30.08 4.26
1985 4808 1.449246 CCCTTCCTTCTGCTCGCTG 60.449 63.158 0.00 0.00 0.00 5.18
1986 4809 2.105466 CCTTCCTTCTGCTCGCTGC 61.105 63.158 0.00 0.00 43.25 5.25
1987 4810 1.079266 CTTCCTTCTGCTCGCTGCT 60.079 57.895 0.00 0.00 43.37 4.24
1990 4813 1.375140 CCTTCTGCTCGCTGCTCAA 60.375 57.895 0.00 0.00 43.37 3.02
1991 4814 1.633852 CCTTCTGCTCGCTGCTCAAC 61.634 60.000 0.00 0.00 43.37 3.18
1992 4815 0.669932 CTTCTGCTCGCTGCTCAACT 60.670 55.000 0.00 0.00 43.37 3.16
1993 4816 0.947660 TTCTGCTCGCTGCTCAACTG 60.948 55.000 0.00 0.00 43.37 3.16
1994 4817 3.024782 CTGCTCGCTGCTCAACTGC 62.025 63.158 0.00 0.00 43.37 4.40
1995 4818 3.797546 GCTCGCTGCTCAACTGCC 61.798 66.667 0.00 0.00 39.93 4.85
1996 4819 2.357881 CTCGCTGCTCAACTGCCA 60.358 61.111 0.00 0.00 39.93 4.92
1997 4820 1.744368 CTCGCTGCTCAACTGCCAT 60.744 57.895 0.00 0.00 39.93 4.40
2034 4857 1.779683 GTTACGGTCTGCTCGTTGC 59.220 57.895 0.00 0.00 41.38 4.17
2043 4866 2.721231 GCTCGTTGCAGGCACAAA 59.279 55.556 0.00 0.00 42.31 2.83
2044 4867 1.370900 GCTCGTTGCAGGCACAAAG 60.371 57.895 0.00 0.00 42.31 2.77
2045 4868 1.283793 CTCGTTGCAGGCACAAAGG 59.716 57.895 0.00 0.00 31.06 3.11
2046 4869 2.133742 CTCGTTGCAGGCACAAAGGG 62.134 60.000 0.00 0.19 31.06 3.95
2047 4870 2.029518 GTTGCAGGCACAAAGGGC 59.970 61.111 0.00 0.00 0.00 5.19
2048 4871 3.604667 TTGCAGGCACAAAGGGCG 61.605 61.111 0.00 0.00 38.57 6.13
2049 4872 4.892965 TGCAGGCACAAAGGGCGT 62.893 61.111 0.00 0.00 38.57 5.68
2050 4873 4.347453 GCAGGCACAAAGGGCGTG 62.347 66.667 9.37 9.37 46.68 5.34
2051 4874 2.906897 CAGGCACAAAGGGCGTGT 60.907 61.111 5.83 0.00 41.00 4.49
2052 4875 2.594592 AGGCACAAAGGGCGTGTC 60.595 61.111 0.00 0.00 39.30 3.67
2053 4876 3.670377 GGCACAAAGGGCGTGTCC 61.670 66.667 0.00 0.00 36.71 4.02
2054 4877 4.025401 GCACAAAGGGCGTGTCCG 62.025 66.667 0.00 0.00 36.71 4.79
2055 4878 2.590575 CACAAAGGGCGTGTCCGT 60.591 61.111 0.00 0.00 36.15 4.69
2056 4879 2.280592 ACAAAGGGCGTGTCCGTC 60.281 61.111 0.00 0.00 38.17 4.79
2057 4880 2.030562 CAAAGGGCGTGTCCGTCT 59.969 61.111 0.00 0.00 39.11 4.18
2058 4881 2.030562 AAAGGGCGTGTCCGTCTG 59.969 61.111 0.00 0.00 39.11 3.51
2059 4882 4.681978 AAGGGCGTGTCCGTCTGC 62.682 66.667 0.00 0.00 39.11 4.26
2062 4885 4.664677 GGCGTGTCCGTCTGCTGT 62.665 66.667 0.00 0.00 35.32 4.40
2063 4886 2.661866 GCGTGTCCGTCTGCTGTT 60.662 61.111 0.00 0.00 36.15 3.16
2064 4887 2.244651 GCGTGTCCGTCTGCTGTTT 61.245 57.895 0.00 0.00 36.15 2.83
2065 4888 0.942410 GCGTGTCCGTCTGCTGTTTA 60.942 55.000 0.00 0.00 36.15 2.01
2066 4889 1.060713 CGTGTCCGTCTGCTGTTTAG 58.939 55.000 0.00 0.00 0.00 1.85
2067 4890 1.429463 GTGTCCGTCTGCTGTTTAGG 58.571 55.000 0.00 0.00 0.00 2.69
2068 4891 0.320421 TGTCCGTCTGCTGTTTAGGC 60.320 55.000 0.00 0.00 0.00 3.93
2069 4892 0.320421 GTCCGTCTGCTGTTTAGGCA 60.320 55.000 0.00 0.00 38.10 4.75
2070 4893 0.613260 TCCGTCTGCTGTTTAGGCAT 59.387 50.000 0.00 0.00 39.07 4.40
2071 4894 1.009829 CCGTCTGCTGTTTAGGCATC 58.990 55.000 0.00 0.00 39.07 3.91
2072 4895 1.406069 CCGTCTGCTGTTTAGGCATCT 60.406 52.381 0.00 0.00 39.07 2.90
2073 4896 1.662629 CGTCTGCTGTTTAGGCATCTG 59.337 52.381 0.00 0.00 39.07 2.90
2074 4897 2.704572 GTCTGCTGTTTAGGCATCTGT 58.295 47.619 0.00 0.00 39.07 3.41
2075 4898 3.077359 GTCTGCTGTTTAGGCATCTGTT 58.923 45.455 0.00 0.00 39.07 3.16
2076 4899 3.076621 TCTGCTGTTTAGGCATCTGTTG 58.923 45.455 0.00 0.00 39.07 3.33
2077 4900 2.816087 CTGCTGTTTAGGCATCTGTTGT 59.184 45.455 0.00 0.00 39.07 3.32
2078 4901 3.221771 TGCTGTTTAGGCATCTGTTGTT 58.778 40.909 0.00 0.00 34.56 2.83
2079 4902 3.253188 TGCTGTTTAGGCATCTGTTGTTC 59.747 43.478 0.00 0.00 34.56 3.18
2080 4903 3.503748 GCTGTTTAGGCATCTGTTGTTCT 59.496 43.478 0.00 0.00 0.00 3.01
2081 4904 4.614535 GCTGTTTAGGCATCTGTTGTTCTG 60.615 45.833 0.00 0.00 0.00 3.02
2082 4905 4.713553 TGTTTAGGCATCTGTTGTTCTGA 58.286 39.130 0.00 0.00 0.00 3.27
2083 4906 4.515191 TGTTTAGGCATCTGTTGTTCTGAC 59.485 41.667 0.00 0.00 0.00 3.51
2084 4907 4.623932 TTAGGCATCTGTTGTTCTGACT 57.376 40.909 0.00 0.00 0.00 3.41
2085 4908 3.051081 AGGCATCTGTTGTTCTGACTC 57.949 47.619 0.00 0.00 0.00 3.36
2086 4909 1.728971 GGCATCTGTTGTTCTGACTCG 59.271 52.381 0.00 0.00 0.00 4.18
2087 4910 1.728971 GCATCTGTTGTTCTGACTCGG 59.271 52.381 0.00 0.00 0.00 4.63
2088 4911 2.868044 GCATCTGTTGTTCTGACTCGGT 60.868 50.000 0.00 0.00 0.00 4.69
2089 4912 3.614150 GCATCTGTTGTTCTGACTCGGTA 60.614 47.826 0.00 0.00 0.00 4.02
2090 4913 3.917329 TCTGTTGTTCTGACTCGGTAG 57.083 47.619 0.00 0.00 0.00 3.18
2091 4914 3.220110 TCTGTTGTTCTGACTCGGTAGT 58.780 45.455 0.00 0.00 39.21 2.73
2092 4915 4.392047 TCTGTTGTTCTGACTCGGTAGTA 58.608 43.478 0.00 0.00 35.56 1.82
2093 4916 5.008331 TCTGTTGTTCTGACTCGGTAGTAT 58.992 41.667 0.00 0.00 35.56 2.12
2094 4917 5.055642 TGTTGTTCTGACTCGGTAGTATG 57.944 43.478 0.00 0.00 35.56 2.39
2095 4918 4.082408 TGTTGTTCTGACTCGGTAGTATGG 60.082 45.833 0.00 0.00 35.56 2.74
2096 4919 2.426024 TGTTCTGACTCGGTAGTATGGC 59.574 50.000 0.00 0.00 35.56 4.40
2097 4920 1.688772 TCTGACTCGGTAGTATGGCC 58.311 55.000 0.00 0.00 35.56 5.36
2102 4925 4.412933 CGGTAGTATGGCCGTGTG 57.587 61.111 8.05 0.00 42.73 3.82
2103 4926 1.514087 CGGTAGTATGGCCGTGTGT 59.486 57.895 8.05 0.00 42.73 3.72
2104 4927 0.740149 CGGTAGTATGGCCGTGTGTA 59.260 55.000 8.05 0.00 42.73 2.90
2105 4928 1.134753 CGGTAGTATGGCCGTGTGTAA 59.865 52.381 8.05 0.00 42.73 2.41
2106 4929 2.417107 CGGTAGTATGGCCGTGTGTAAA 60.417 50.000 8.05 0.00 42.73 2.01
2107 4930 3.738899 CGGTAGTATGGCCGTGTGTAAAT 60.739 47.826 8.05 0.00 42.73 1.40
2108 4931 3.805971 GGTAGTATGGCCGTGTGTAAATC 59.194 47.826 8.05 0.00 0.00 2.17
2109 4932 3.906720 AGTATGGCCGTGTGTAAATCT 57.093 42.857 8.05 0.00 0.00 2.40
2110 4933 3.793559 AGTATGGCCGTGTGTAAATCTC 58.206 45.455 8.05 0.00 0.00 2.75
2111 4934 3.451178 AGTATGGCCGTGTGTAAATCTCT 59.549 43.478 8.05 0.00 0.00 3.10
2112 4935 2.093306 TGGCCGTGTGTAAATCTCTG 57.907 50.000 0.00 0.00 0.00 3.35
2113 4936 0.727398 GGCCGTGTGTAAATCTCTGC 59.273 55.000 0.00 0.00 0.00 4.26
2114 4937 1.438651 GCCGTGTGTAAATCTCTGCA 58.561 50.000 0.00 0.00 0.00 4.41
2115 4938 1.394917 GCCGTGTGTAAATCTCTGCAG 59.605 52.381 7.63 7.63 0.00 4.41
2116 4939 2.930887 GCCGTGTGTAAATCTCTGCAGA 60.931 50.000 17.19 17.19 0.00 4.26
2117 4940 2.668457 CCGTGTGTAAATCTCTGCAGAC 59.332 50.000 13.74 2.83 0.00 3.51
2118 4941 3.317150 CGTGTGTAAATCTCTGCAGACA 58.683 45.455 13.74 2.30 0.00 3.41
2119 4942 3.740832 CGTGTGTAAATCTCTGCAGACAA 59.259 43.478 13.74 4.21 0.00 3.18
2120 4943 4.376413 CGTGTGTAAATCTCTGCAGACAAC 60.376 45.833 13.74 7.21 0.00 3.32
2121 4944 3.740832 TGTGTAAATCTCTGCAGACAACG 59.259 43.478 13.74 2.94 0.00 4.10
2122 4945 3.123621 GTGTAAATCTCTGCAGACAACGG 59.876 47.826 13.74 2.51 0.00 4.44
2123 4946 1.160137 AAATCTCTGCAGACAACGGC 58.840 50.000 13.74 0.00 37.70 5.68
2124 4947 0.322975 AATCTCTGCAGACAACGGCT 59.677 50.000 13.74 0.00 38.02 5.52
2125 4948 0.108424 ATCTCTGCAGACAACGGCTC 60.108 55.000 13.74 0.00 38.02 4.70
2126 4949 1.005748 CTCTGCAGACAACGGCTCA 60.006 57.895 13.74 0.00 38.02 4.26
2127 4950 0.390866 CTCTGCAGACAACGGCTCAT 60.391 55.000 13.74 0.00 38.02 2.90
2128 4951 0.894835 TCTGCAGACAACGGCTCATA 59.105 50.000 13.74 0.00 38.02 2.15
2129 4952 1.275010 TCTGCAGACAACGGCTCATAA 59.725 47.619 13.74 0.00 38.02 1.90
2130 4953 1.394917 CTGCAGACAACGGCTCATAAC 59.605 52.381 8.42 0.00 38.02 1.89
2131 4954 1.001974 TGCAGACAACGGCTCATAACT 59.998 47.619 0.00 0.00 38.02 2.24
2132 4955 2.076863 GCAGACAACGGCTCATAACTT 58.923 47.619 0.00 0.00 34.59 2.66
2133 4956 2.159653 GCAGACAACGGCTCATAACTTG 60.160 50.000 0.00 0.00 34.59 3.16
2134 4957 3.325870 CAGACAACGGCTCATAACTTGA 58.674 45.455 0.00 0.00 0.00 3.02
2147 4970 7.301068 CTCATAACTTGAGTGGATGTTTCTC 57.699 40.000 6.32 0.00 45.79 2.87
2148 4971 7.009179 TCATAACTTGAGTGGATGTTTCTCT 57.991 36.000 6.32 0.00 0.00 3.10
2149 4972 6.875726 TCATAACTTGAGTGGATGTTTCTCTG 59.124 38.462 6.32 0.00 0.00 3.35
2150 4973 4.696479 ACTTGAGTGGATGTTTCTCTGT 57.304 40.909 0.00 0.00 0.00 3.41
2151 4974 5.041191 ACTTGAGTGGATGTTTCTCTGTT 57.959 39.130 0.00 0.00 0.00 3.16
2152 4975 5.059833 ACTTGAGTGGATGTTTCTCTGTTC 58.940 41.667 0.00 0.00 0.00 3.18
2153 4976 4.008074 TGAGTGGATGTTTCTCTGTTCC 57.992 45.455 0.00 0.00 0.00 3.62
2154 4977 3.390967 TGAGTGGATGTTTCTCTGTTCCA 59.609 43.478 0.00 0.00 34.18 3.53
2155 4978 4.042062 TGAGTGGATGTTTCTCTGTTCCAT 59.958 41.667 0.00 0.00 38.64 3.41
2156 4979 4.990526 AGTGGATGTTTCTCTGTTCCATT 58.009 39.130 0.00 0.00 38.64 3.16
2157 4980 5.388654 AGTGGATGTTTCTCTGTTCCATTT 58.611 37.500 0.00 0.00 38.64 2.32
2158 4981 5.474876 AGTGGATGTTTCTCTGTTCCATTTC 59.525 40.000 0.00 0.00 38.64 2.17
2159 4982 5.474876 GTGGATGTTTCTCTGTTCCATTTCT 59.525 40.000 0.00 0.00 38.64 2.52
2160 4983 5.707298 TGGATGTTTCTCTGTTCCATTTCTC 59.293 40.000 0.00 0.00 31.67 2.87
2161 4984 5.707298 GGATGTTTCTCTGTTCCATTTCTCA 59.293 40.000 0.00 0.00 0.00 3.27
2162 4985 6.207417 GGATGTTTCTCTGTTCCATTTCTCAA 59.793 38.462 0.00 0.00 0.00 3.02
2163 4986 6.377327 TGTTTCTCTGTTCCATTTCTCAAC 57.623 37.500 0.00 0.00 0.00 3.18
2164 4987 5.885352 TGTTTCTCTGTTCCATTTCTCAACA 59.115 36.000 0.00 0.00 0.00 3.33
2165 4988 6.183360 TGTTTCTCTGTTCCATTTCTCAACAC 60.183 38.462 0.00 0.00 0.00 3.32
2166 4989 5.034852 TCTCTGTTCCATTTCTCAACACA 57.965 39.130 0.00 0.00 0.00 3.72
2167 4990 5.624159 TCTCTGTTCCATTTCTCAACACAT 58.376 37.500 0.00 0.00 0.00 3.21
2168 4991 6.064060 TCTCTGTTCCATTTCTCAACACATT 58.936 36.000 0.00 0.00 0.00 2.71
2169 4992 6.547141 TCTCTGTTCCATTTCTCAACACATTT 59.453 34.615 0.00 0.00 0.00 2.32
2170 4993 7.068593 TCTCTGTTCCATTTCTCAACACATTTT 59.931 33.333 0.00 0.00 0.00 1.82
2171 4994 6.979817 TCTGTTCCATTTCTCAACACATTTTG 59.020 34.615 0.00 0.00 0.00 2.44
2172 4995 6.871844 TGTTCCATTTCTCAACACATTTTGA 58.128 32.000 0.00 0.00 34.30 2.69
2173 4996 6.756074 TGTTCCATTTCTCAACACATTTTGAC 59.244 34.615 0.00 0.00 32.02 3.18
2174 4997 6.713762 TCCATTTCTCAACACATTTTGACT 57.286 33.333 0.00 0.00 32.02 3.41
2175 4998 7.815840 TCCATTTCTCAACACATTTTGACTA 57.184 32.000 0.00 0.00 32.02 2.59
2176 4999 8.408043 TCCATTTCTCAACACATTTTGACTAT 57.592 30.769 0.00 0.00 32.02 2.12
2177 5000 8.298854 TCCATTTCTCAACACATTTTGACTATG 58.701 33.333 0.00 0.00 32.02 2.23
2178 5001 7.543172 CCATTTCTCAACACATTTTGACTATGG 59.457 37.037 0.00 0.00 32.19 2.74
2179 5002 6.573664 TTCTCAACACATTTTGACTATGGG 57.426 37.500 0.00 0.00 32.02 4.00
2180 5003 5.630121 TCTCAACACATTTTGACTATGGGT 58.370 37.500 0.00 0.00 41.24 4.51
2182 5005 7.227873 TCTCAACACATTTTGACTATGGGTTA 58.772 34.615 3.42 0.00 45.31 2.85
2183 5006 7.721842 TCTCAACACATTTTGACTATGGGTTAA 59.278 33.333 3.42 0.00 45.31 2.01
2184 5007 7.653647 TCAACACATTTTGACTATGGGTTAAC 58.346 34.615 3.42 0.00 45.31 2.01
2185 5008 6.249035 ACACATTTTGACTATGGGTTAACG 57.751 37.500 0.00 0.00 36.23 3.18
2186 5009 5.998981 ACACATTTTGACTATGGGTTAACGA 59.001 36.000 0.00 0.00 36.23 3.85
2187 5010 6.148811 ACACATTTTGACTATGGGTTAACGAG 59.851 38.462 0.00 0.00 36.23 4.18
2188 5011 5.646360 ACATTTTGACTATGGGTTAACGAGG 59.354 40.000 0.00 0.00 0.00 4.63
2189 5012 2.973694 TGACTATGGGTTAACGAGGC 57.026 50.000 0.00 0.00 0.00 4.70
2190 5013 2.463752 TGACTATGGGTTAACGAGGCT 58.536 47.619 0.00 0.00 0.00 4.58
2191 5014 3.634504 TGACTATGGGTTAACGAGGCTA 58.365 45.455 0.00 0.00 0.00 3.93
2192 5015 4.220724 TGACTATGGGTTAACGAGGCTAT 58.779 43.478 0.00 0.00 0.00 2.97
2193 5016 4.652421 TGACTATGGGTTAACGAGGCTATT 59.348 41.667 0.00 0.00 0.00 1.73
2194 5017 4.957296 ACTATGGGTTAACGAGGCTATTG 58.043 43.478 0.00 0.00 0.00 1.90
2195 5018 2.702592 TGGGTTAACGAGGCTATTGG 57.297 50.000 0.00 0.00 0.00 3.16
2196 5019 1.306148 GGGTTAACGAGGCTATTGGC 58.694 55.000 0.00 0.00 40.90 4.52
2205 5028 3.813596 GCTATTGGCCGTGTGGAG 58.186 61.111 0.00 0.00 37.49 3.86
2206 5029 1.819632 GCTATTGGCCGTGTGGAGG 60.820 63.158 0.00 0.00 37.49 4.30
2207 5030 1.153168 CTATTGGCCGTGTGGAGGG 60.153 63.158 0.00 0.00 37.49 4.30
2208 5031 2.608970 CTATTGGCCGTGTGGAGGGG 62.609 65.000 0.00 0.00 37.49 4.79
2214 5037 4.087892 CGTGTGGAGGGGAGGCTG 62.088 72.222 0.00 0.00 0.00 4.85
2215 5038 2.930562 GTGTGGAGGGGAGGCTGT 60.931 66.667 0.00 0.00 0.00 4.40
2216 5039 1.612442 GTGTGGAGGGGAGGCTGTA 60.612 63.158 0.00 0.00 0.00 2.74
2217 5040 1.306141 TGTGGAGGGGAGGCTGTAG 60.306 63.158 0.00 0.00 0.00 2.74
2218 5041 2.365635 TGGAGGGGAGGCTGTAGC 60.366 66.667 0.00 0.00 41.14 3.58
2219 5042 2.365635 GGAGGGGAGGCTGTAGCA 60.366 66.667 6.18 0.00 44.36 3.49
2220 5043 2.439104 GGAGGGGAGGCTGTAGCAG 61.439 68.421 6.18 0.00 44.36 4.24
2221 5044 1.381872 GAGGGGAGGCTGTAGCAGA 60.382 63.158 6.18 0.00 44.36 4.26
2222 5045 1.681486 GAGGGGAGGCTGTAGCAGAC 61.681 65.000 6.18 0.00 44.36 3.51
2223 5046 2.496817 GGGAGGCTGTAGCAGACG 59.503 66.667 6.18 0.00 45.59 4.18
2224 5047 2.052690 GGGAGGCTGTAGCAGACGA 61.053 63.158 6.18 0.00 45.59 4.20
2225 5048 1.435515 GGAGGCTGTAGCAGACGAG 59.564 63.158 6.18 0.00 45.59 4.18
2226 5049 1.316706 GGAGGCTGTAGCAGACGAGT 61.317 60.000 6.18 0.00 45.59 4.18
2227 5050 1.380524 GAGGCTGTAGCAGACGAGTA 58.619 55.000 6.18 0.00 45.59 2.59
2228 5051 1.064357 GAGGCTGTAGCAGACGAGTAC 59.936 57.143 6.18 0.00 45.59 2.73
2229 5052 0.809385 GGCTGTAGCAGACGAGTACA 59.191 55.000 6.18 0.00 44.36 2.90
2230 5053 1.405821 GGCTGTAGCAGACGAGTACAT 59.594 52.381 6.18 0.00 44.36 2.29
2231 5054 2.455032 GCTGTAGCAGACGAGTACATG 58.545 52.381 0.00 0.00 41.59 3.21
2232 5055 2.159366 GCTGTAGCAGACGAGTACATGT 60.159 50.000 2.69 2.69 41.59 3.21
2233 5056 3.064958 GCTGTAGCAGACGAGTACATGTA 59.935 47.826 0.08 0.08 41.59 2.29
2234 5057 4.589252 CTGTAGCAGACGAGTACATGTAC 58.411 47.826 25.51 25.51 32.44 2.90
2235 5058 4.004982 TGTAGCAGACGAGTACATGTACA 58.995 43.478 32.02 11.51 38.48 2.90
2236 5059 4.638865 TGTAGCAGACGAGTACATGTACAT 59.361 41.667 32.02 19.66 38.48 2.29
2237 5060 4.033990 AGCAGACGAGTACATGTACATG 57.966 45.455 32.02 29.97 44.15 3.21
2238 5061 3.116300 GCAGACGAGTACATGTACATGG 58.884 50.000 33.32 22.99 42.91 3.66
2239 5062 3.428999 GCAGACGAGTACATGTACATGGT 60.429 47.826 33.32 25.46 42.91 3.55
2240 5063 4.105486 CAGACGAGTACATGTACATGGTG 58.895 47.826 33.32 21.32 42.91 4.17
2241 5064 3.130516 AGACGAGTACATGTACATGGTGG 59.869 47.826 33.32 22.00 42.91 4.61
2242 5065 2.829720 ACGAGTACATGTACATGGTGGT 59.170 45.455 33.32 22.53 42.91 4.16
2243 5066 3.186909 CGAGTACATGTACATGGTGGTG 58.813 50.000 33.32 19.09 42.91 4.17
2244 5067 3.531538 GAGTACATGTACATGGTGGTGG 58.468 50.000 33.32 12.28 42.91 4.61
2245 5068 2.014128 GTACATGTACATGGTGGTGGC 58.986 52.381 33.32 14.78 42.91 5.01
2246 5069 0.676466 ACATGTACATGGTGGTGGCG 60.676 55.000 33.32 10.94 42.91 5.69
2247 5070 1.748879 ATGTACATGGTGGTGGCGC 60.749 57.895 7.78 0.00 0.00 6.53
2248 5071 3.496131 GTACATGGTGGTGGCGCG 61.496 66.667 0.00 0.00 0.00 6.86
2249 5072 4.769063 TACATGGTGGTGGCGCGG 62.769 66.667 8.83 0.00 0.00 6.46
2270 5093 3.847602 CTGGGGCTCGAGGCAGAG 61.848 72.222 36.07 26.56 44.01 3.35
2273 5096 4.154347 GGGCTCGAGGCAGAGGTG 62.154 72.222 36.07 0.00 44.01 4.00
2274 5097 3.071206 GGCTCGAGGCAGAGGTGA 61.071 66.667 31.94 0.00 44.01 4.02
2275 5098 2.493973 GCTCGAGGCAGAGGTGAG 59.506 66.667 15.58 0.00 41.35 3.51
2276 5099 3.074999 GCTCGAGGCAGAGGTGAGG 62.075 68.421 15.58 0.00 41.35 3.86
2277 5100 1.680651 CTCGAGGCAGAGGTGAGGT 60.681 63.158 3.91 0.00 34.74 3.85
2278 5101 1.943116 CTCGAGGCAGAGGTGAGGTG 61.943 65.000 3.91 0.00 34.74 4.00
2279 5102 2.985456 GAGGCAGAGGTGAGGTGG 59.015 66.667 0.00 0.00 0.00 4.61
2280 5103 3.322318 GAGGCAGAGGTGAGGTGGC 62.322 68.421 0.00 0.00 37.03 5.01
2281 5104 4.767255 GGCAGAGGTGAGGTGGCG 62.767 72.222 0.00 0.00 0.00 5.69
2282 5105 4.008933 GCAGAGGTGAGGTGGCGT 62.009 66.667 0.00 0.00 0.00 5.68
2283 5106 2.262915 CAGAGGTGAGGTGGCGTC 59.737 66.667 0.00 0.00 0.00 5.19
2284 5107 2.118513 AGAGGTGAGGTGGCGTCT 59.881 61.111 0.00 0.00 0.00 4.18
2285 5108 2.262915 GAGGTGAGGTGGCGTCTG 59.737 66.667 0.00 0.00 0.00 3.51
2286 5109 2.203640 AGGTGAGGTGGCGTCTGA 60.204 61.111 0.00 0.00 0.00 3.27
2287 5110 2.048127 GGTGAGGTGGCGTCTGAC 60.048 66.667 0.00 0.00 0.00 3.51
2288 5111 2.430921 GTGAGGTGGCGTCTGACG 60.431 66.667 24.78 24.78 45.88 4.35
2289 5112 2.596338 TGAGGTGGCGTCTGACGA 60.596 61.111 32.07 10.94 46.05 4.20
2290 5113 2.179517 GAGGTGGCGTCTGACGAG 59.820 66.667 32.07 6.36 46.05 4.18
2291 5114 2.282251 AGGTGGCGTCTGACGAGA 60.282 61.111 32.07 15.12 46.05 4.04
2292 5115 2.179517 GGTGGCGTCTGACGAGAG 59.820 66.667 32.07 5.22 46.05 3.20
2314 5137 9.737427 GAGAGTGTCGATTTCTTCAGATATAAA 57.263 33.333 0.00 0.00 0.00 1.40
2326 5149 9.871238 TTCTTCAGATATAAATATAGGTTCGCC 57.129 33.333 0.00 0.00 37.60 5.54
2328 5151 9.522804 CTTCAGATATAAATATAGGTTCGCCTC 57.477 37.037 0.00 0.00 46.86 4.70
2329 5152 8.008513 TCAGATATAAATATAGGTTCGCCTCC 57.991 38.462 0.00 0.00 46.86 4.30
2330 5153 7.839705 TCAGATATAAATATAGGTTCGCCTCCT 59.160 37.037 0.00 0.00 46.86 3.69
2331 5154 8.138712 CAGATATAAATATAGGTTCGCCTCCTC 58.861 40.741 0.00 0.00 46.86 3.71
2332 5155 5.678955 ATAAATATAGGTTCGCCTCCTCC 57.321 43.478 0.00 0.00 46.86 4.30
2333 5156 3.261818 AATATAGGTTCGCCTCCTCCT 57.738 47.619 0.00 0.00 46.86 3.69
2334 5157 4.399483 AATATAGGTTCGCCTCCTCCTA 57.601 45.455 0.00 0.00 46.86 2.94
2335 5158 2.769602 ATAGGTTCGCCTCCTCCTAA 57.230 50.000 0.00 0.00 46.86 2.69
2336 5159 2.769602 TAGGTTCGCCTCCTCCTAAT 57.230 50.000 0.00 0.00 46.86 1.73
2337 5160 1.880941 AGGTTCGCCTCCTCCTAATT 58.119 50.000 0.00 0.00 46.86 1.40
2338 5161 3.042059 AGGTTCGCCTCCTCCTAATTA 57.958 47.619 0.00 0.00 46.86 1.40
2339 5162 2.966516 AGGTTCGCCTCCTCCTAATTAG 59.033 50.000 5.43 5.43 46.86 1.73
2340 5163 2.037381 GGTTCGCCTCCTCCTAATTAGG 59.963 54.545 23.54 23.54 45.02 2.69
2346 5169 4.545208 CCTCCTCCTAATTAGGCTAAGC 57.455 50.000 24.52 0.00 43.31 3.09
2347 5170 4.164204 CCTCCTCCTAATTAGGCTAAGCT 58.836 47.826 24.52 5.12 43.31 3.74
2348 5171 4.020662 CCTCCTCCTAATTAGGCTAAGCTG 60.021 50.000 24.52 12.22 43.31 4.24
2349 5172 4.557705 TCCTCCTAATTAGGCTAAGCTGT 58.442 43.478 24.52 1.03 43.31 4.40
2350 5173 4.969359 TCCTCCTAATTAGGCTAAGCTGTT 59.031 41.667 24.52 4.73 43.31 3.16
2351 5174 5.070580 TCCTCCTAATTAGGCTAAGCTGTTC 59.929 44.000 24.52 0.00 43.31 3.18
2352 5175 5.291905 TCCTAATTAGGCTAAGCTGTTCC 57.708 43.478 24.52 0.00 43.31 3.62
2353 5176 4.102681 TCCTAATTAGGCTAAGCTGTTCCC 59.897 45.833 24.52 0.00 43.31 3.97
2354 5177 4.103311 CCTAATTAGGCTAAGCTGTTCCCT 59.897 45.833 18.52 0.00 36.53 4.20
2355 5178 3.567478 ATTAGGCTAAGCTGTTCCCTG 57.433 47.619 13.15 0.00 0.00 4.45
2356 5179 1.952621 TAGGCTAAGCTGTTCCCTGT 58.047 50.000 0.00 0.00 0.00 4.00
2357 5180 0.615850 AGGCTAAGCTGTTCCCTGTC 59.384 55.000 0.00 0.00 0.00 3.51
2358 5181 0.324943 GGCTAAGCTGTTCCCTGTCA 59.675 55.000 0.00 0.00 0.00 3.58
2359 5182 1.677217 GGCTAAGCTGTTCCCTGTCAG 60.677 57.143 0.00 0.00 35.12 3.51
2360 5183 1.276421 GCTAAGCTGTTCCCTGTCAGA 59.724 52.381 0.00 0.00 34.02 3.27
2361 5184 2.676463 GCTAAGCTGTTCCCTGTCAGAG 60.676 54.545 0.00 0.00 34.02 3.35
2362 5185 0.689623 AAGCTGTTCCCTGTCAGAGG 59.310 55.000 0.00 1.10 42.38 3.69
2363 5186 0.178921 AGCTGTTCCCTGTCAGAGGA 60.179 55.000 0.00 3.69 46.33 3.71
2364 5187 0.908198 GCTGTTCCCTGTCAGAGGAT 59.092 55.000 0.00 0.00 46.33 3.24
2365 5188 1.406614 GCTGTTCCCTGTCAGAGGATG 60.407 57.143 0.00 2.35 46.33 3.51
2366 5189 1.209019 CTGTTCCCTGTCAGAGGATGG 59.791 57.143 0.00 0.00 46.33 3.51
2367 5190 0.107459 GTTCCCTGTCAGAGGATGGC 60.107 60.000 0.00 0.00 46.33 4.40
2368 5191 0.547471 TTCCCTGTCAGAGGATGGCA 60.547 55.000 0.00 0.00 46.33 4.92
2372 5195 2.290847 TGTCAGAGGATGGCAGTCC 58.709 57.895 7.60 7.60 39.05 3.85
2384 5207 3.993535 CAGTCCTTGCTTCAGCCC 58.006 61.111 0.00 0.00 41.18 5.19
2385 5208 1.377994 CAGTCCTTGCTTCAGCCCT 59.622 57.895 0.00 0.00 41.18 5.19
2386 5209 0.251077 CAGTCCTTGCTTCAGCCCTT 60.251 55.000 0.00 0.00 41.18 3.95
2387 5210 0.037447 AGTCCTTGCTTCAGCCCTTC 59.963 55.000 0.00 0.00 41.18 3.46
2388 5211 0.962855 GTCCTTGCTTCAGCCCTTCC 60.963 60.000 0.00 0.00 41.18 3.46
2389 5212 1.136329 TCCTTGCTTCAGCCCTTCCT 61.136 55.000 0.00 0.00 41.18 3.36
2390 5213 0.251519 CCTTGCTTCAGCCCTTCCTT 60.252 55.000 0.00 0.00 41.18 3.36
2391 5214 1.172175 CTTGCTTCAGCCCTTCCTTC 58.828 55.000 0.00 0.00 41.18 3.46
2392 5215 0.773644 TTGCTTCAGCCCTTCCTTCT 59.226 50.000 0.00 0.00 41.18 2.85
2393 5216 0.037303 TGCTTCAGCCCTTCCTTCTG 59.963 55.000 0.00 0.00 41.18 3.02
2394 5217 1.311651 GCTTCAGCCCTTCCTTCTGC 61.312 60.000 0.00 0.00 34.31 4.26
2395 5218 0.327591 CTTCAGCCCTTCCTTCTGCT 59.672 55.000 0.00 0.00 33.52 4.24
2396 5219 4.315588 CAGCCCTTCCTTCTGCTG 57.684 61.111 0.00 0.00 44.43 4.41
2397 5220 1.378250 CAGCCCTTCCTTCTGCTGG 60.378 63.158 2.52 0.00 45.69 4.85
2398 5221 2.753446 GCCCTTCCTTCTGCTGGC 60.753 66.667 0.00 0.00 0.00 4.85
2399 5222 3.085223 CCCTTCCTTCTGCTGGCT 58.915 61.111 0.00 0.00 0.00 4.75
2400 5223 1.077858 CCCTTCCTTCTGCTGGCTC 60.078 63.158 0.00 0.00 0.00 4.70
2401 5224 1.681666 CCTTCCTTCTGCTGGCTCA 59.318 57.895 0.00 0.00 0.00 4.26
2402 5225 0.037303 CCTTCCTTCTGCTGGCTCAA 59.963 55.000 0.00 0.00 0.00 3.02
2403 5226 1.163554 CTTCCTTCTGCTGGCTCAAC 58.836 55.000 0.00 0.00 0.00 3.18
2404 5227 0.767375 TTCCTTCTGCTGGCTCAACT 59.233 50.000 0.00 0.00 0.00 3.16
2405 5228 0.035881 TCCTTCTGCTGGCTCAACTG 59.964 55.000 0.00 0.00 0.00 3.16
2406 5229 1.584380 CCTTCTGCTGGCTCAACTGC 61.584 60.000 0.00 0.00 36.07 4.40
2414 5237 3.805267 GCTCAACTGCCAGGATCG 58.195 61.111 0.00 0.00 0.00 3.69
2415 5238 2.467826 GCTCAACTGCCAGGATCGC 61.468 63.158 0.00 0.00 0.00 4.58
2416 5239 1.817099 CTCAACTGCCAGGATCGCC 60.817 63.158 0.00 0.00 0.00 5.54
2418 5241 0.975556 TCAACTGCCAGGATCGCCTA 60.976 55.000 0.00 0.00 44.80 3.93
2419 5242 0.107703 CAACTGCCAGGATCGCCTAA 60.108 55.000 0.00 0.00 44.80 2.69
2420 5243 0.618458 AACTGCCAGGATCGCCTAAA 59.382 50.000 0.00 0.00 44.80 1.85
2421 5244 0.618458 ACTGCCAGGATCGCCTAAAA 59.382 50.000 0.00 0.00 44.80 1.52
2422 5245 1.017387 CTGCCAGGATCGCCTAAAAC 58.983 55.000 0.00 0.00 44.80 2.43
2423 5246 0.742990 TGCCAGGATCGCCTAAAACG 60.743 55.000 0.00 0.00 44.80 3.60
2424 5247 2.014594 CCAGGATCGCCTAAAACGC 58.985 57.895 0.00 0.00 44.80 4.84
2425 5248 1.436983 CCAGGATCGCCTAAAACGCC 61.437 60.000 0.00 0.00 44.80 5.68
2426 5249 0.462047 CAGGATCGCCTAAAACGCCT 60.462 55.000 0.00 0.00 44.80 5.52
2427 5250 1.117150 AGGATCGCCTAAAACGCCTA 58.883 50.000 0.00 0.00 44.74 3.93
2428 5251 1.483415 AGGATCGCCTAAAACGCCTAA 59.517 47.619 0.00 0.00 44.74 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 2549 4.122776 GGTAGAATGTCACGAGCATTGAT 58.877 43.478 7.09 0.00 36.77 2.57
117 2652 3.830192 GGGTGACCGTACGGCGAT 61.830 66.667 33.62 15.42 43.64 4.58
208 2743 6.045072 TCCAAGTACAATCTACACCGATTT 57.955 37.500 0.00 0.00 31.52 2.17
225 2760 0.252881 TCCCTCTCCATGCTCCAAGT 60.253 55.000 0.00 0.00 0.00 3.16
226 2761 0.469070 CTCCCTCTCCATGCTCCAAG 59.531 60.000 0.00 0.00 0.00 3.61
227 2762 0.043183 TCTCCCTCTCCATGCTCCAA 59.957 55.000 0.00 0.00 0.00 3.53
228 2763 0.043183 TTCTCCCTCTCCATGCTCCA 59.957 55.000 0.00 0.00 0.00 3.86
229 2764 1.207791 TTTCTCCCTCTCCATGCTCC 58.792 55.000 0.00 0.00 0.00 4.70
230 2765 2.486907 CCATTTCTCCCTCTCCATGCTC 60.487 54.545 0.00 0.00 0.00 4.26
231 2766 1.493871 CCATTTCTCCCTCTCCATGCT 59.506 52.381 0.00 0.00 0.00 3.79
232 2767 1.478288 CCCATTTCTCCCTCTCCATGC 60.478 57.143 0.00 0.00 0.00 4.06
233 2768 1.144503 CCCCATTTCTCCCTCTCCATG 59.855 57.143 0.00 0.00 0.00 3.66
234 2769 1.527457 CCCCATTTCTCCCTCTCCAT 58.473 55.000 0.00 0.00 0.00 3.41
235 2770 0.624500 CCCCCATTTCTCCCTCTCCA 60.625 60.000 0.00 0.00 0.00 3.86
236 2771 2.000825 GCCCCCATTTCTCCCTCTCC 62.001 65.000 0.00 0.00 0.00 3.71
237 2772 1.281925 TGCCCCCATTTCTCCCTCTC 61.282 60.000 0.00 0.00 0.00 3.20
238 2773 0.850883 TTGCCCCCATTTCTCCCTCT 60.851 55.000 0.00 0.00 0.00 3.69
239 2774 0.684479 GTTGCCCCCATTTCTCCCTC 60.684 60.000 0.00 0.00 0.00 4.30
240 2775 1.388133 GTTGCCCCCATTTCTCCCT 59.612 57.895 0.00 0.00 0.00 4.20
241 2776 1.685765 GGTTGCCCCCATTTCTCCC 60.686 63.158 0.00 0.00 0.00 4.30
242 2777 0.972471 CTGGTTGCCCCCATTTCTCC 60.972 60.000 0.00 0.00 33.00 3.71
243 2778 0.972471 CCTGGTTGCCCCCATTTCTC 60.972 60.000 0.00 0.00 33.00 2.87
244 2779 1.079073 CCTGGTTGCCCCCATTTCT 59.921 57.895 0.00 0.00 33.00 2.52
245 2780 1.989508 CCCTGGTTGCCCCCATTTC 60.990 63.158 0.00 0.00 33.00 2.17
246 2781 2.122504 CCCTGGTTGCCCCCATTT 59.877 61.111 0.00 0.00 33.00 2.32
247 2782 2.339462 AAACCCTGGTTGCCCCCATT 62.339 55.000 1.58 0.00 38.47 3.16
248 2783 1.447964 TAAACCCTGGTTGCCCCCAT 61.448 55.000 1.58 0.00 38.47 4.00
249 2784 1.665948 TTAAACCCTGGTTGCCCCCA 61.666 55.000 1.58 0.00 38.47 4.96
250 2785 1.156566 TTAAACCCTGGTTGCCCCC 59.843 57.895 1.58 0.00 38.47 5.40
251 2786 1.189524 GGTTAAACCCTGGTTGCCCC 61.190 60.000 1.58 0.00 38.47 5.80
252 2787 2.358039 GGTTAAACCCTGGTTGCCC 58.642 57.895 1.58 0.00 38.47 5.36
262 2797 1.025113 GCTCCAGCGAGGGTTAAACC 61.025 60.000 0.00 0.00 36.55 3.27
263 2798 2.467962 GCTCCAGCGAGGGTTAAAC 58.532 57.895 0.00 0.00 36.55 2.01
375 2920 2.049435 AGACACGTCTGCCACATCA 58.951 52.632 0.00 0.00 38.75 3.07
452 2997 0.108138 CTCAAACCTAGCCCAGACGG 60.108 60.000 0.00 0.00 0.00 4.79
456 3001 0.698818 AACCCTCAAACCTAGCCCAG 59.301 55.000 0.00 0.00 0.00 4.45
496 3041 1.459592 GGCGGACGGATCATAAAATCG 59.540 52.381 0.00 0.00 0.00 3.34
517 3062 3.443052 TCAAACCTCCCGAATAGGTACA 58.557 45.455 4.08 0.00 46.85 2.90
519 3064 3.036091 CCTCAAACCTCCCGAATAGGTA 58.964 50.000 4.08 0.00 46.85 3.08
527 3072 3.319972 TCGTATATTCCTCAAACCTCCCG 59.680 47.826 0.00 0.00 0.00 5.14
545 3090 4.155462 GGTATGAGAGCATCCGTAATCGTA 59.845 45.833 0.00 0.00 35.94 3.43
546 3091 3.057456 GGTATGAGAGCATCCGTAATCGT 60.057 47.826 0.00 0.00 35.94 3.73
547 3092 3.057526 TGGTATGAGAGCATCCGTAATCG 60.058 47.826 0.00 0.00 35.94 3.34
548 3093 4.521130 TGGTATGAGAGCATCCGTAATC 57.479 45.455 0.00 0.00 35.94 1.75
549 3094 6.798427 ATATGGTATGAGAGCATCCGTAAT 57.202 37.500 0.00 0.00 42.79 1.89
550 3095 6.014584 ACAATATGGTATGAGAGCATCCGTAA 60.015 38.462 0.00 0.00 42.79 3.18
552 3097 4.284490 ACAATATGGTATGAGAGCATCCGT 59.716 41.667 0.00 0.00 42.79 4.69
553 3098 4.825422 ACAATATGGTATGAGAGCATCCG 58.175 43.478 0.00 0.00 42.79 4.18
563 3108 5.929697 AGACGCAATGACAATATGGTATG 57.070 39.130 0.00 0.00 0.00 2.39
571 3116 5.545658 ACGAAATAAGACGCAATGACAAT 57.454 34.783 0.00 0.00 0.00 2.71
574 3119 4.953269 TCAACGAAATAAGACGCAATGAC 58.047 39.130 0.00 0.00 0.00 3.06
593 3138 5.417266 TCATACCGGAGCAAATCAAAATCAA 59.583 36.000 9.46 0.00 0.00 2.57
594 3139 4.946772 TCATACCGGAGCAAATCAAAATCA 59.053 37.500 9.46 0.00 0.00 2.57
595 3140 5.066505 AGTCATACCGGAGCAAATCAAAATC 59.933 40.000 9.46 0.00 0.00 2.17
596 3141 4.949856 AGTCATACCGGAGCAAATCAAAAT 59.050 37.500 9.46 0.00 0.00 1.82
597 3142 4.331968 AGTCATACCGGAGCAAATCAAAA 58.668 39.130 9.46 0.00 0.00 2.44
598 3143 3.950397 AGTCATACCGGAGCAAATCAAA 58.050 40.909 9.46 0.00 0.00 2.69
618 3163 4.774124 TCCTGGCTTCACATTATCAGAAG 58.226 43.478 0.00 0.00 41.20 2.85
670 3301 3.084039 TGACTGTTTTCCATCCATCTGC 58.916 45.455 0.00 0.00 0.00 4.26
688 3319 0.038618 GCGGGAATTTTGGGTGTGAC 60.039 55.000 0.00 0.00 0.00 3.67
708 3339 3.700038 GGGGAGATCAAACTCTCTTCGTA 59.300 47.826 0.00 0.00 41.23 3.43
747 3379 4.923710 CGGCGCGGATCGATGACA 62.924 66.667 9.72 0.00 41.67 3.58
799 3431 2.474410 TCGAGAGATATCAGCCGCTA 57.526 50.000 5.32 0.00 33.31 4.26
813 3445 0.938008 CGTCAGGTGATCGATCGAGA 59.062 55.000 23.84 11.01 0.00 4.04
814 3446 0.658368 ACGTCAGGTGATCGATCGAG 59.342 55.000 23.84 8.67 0.00 4.04
851 3483 1.692762 GCTCTGATTGGAGGAGGGGTA 60.693 57.143 0.00 0.00 34.21 3.69
878 3510 5.523916 GCGACTTTATTTATGCAGAGGAAGA 59.476 40.000 0.00 0.00 0.00 2.87
881 3513 4.127171 GGCGACTTTATTTATGCAGAGGA 58.873 43.478 0.00 0.00 0.00 3.71
1098 3778 2.990479 CCCTCCTTGGACTTCGGG 59.010 66.667 0.00 0.00 38.35 5.14
1314 3997 0.544357 TCTCCCTGGACGTGATGGTT 60.544 55.000 0.00 0.00 0.00 3.67
1383 4066 2.847234 TTGGTGCCCTCGGACACT 60.847 61.111 2.45 0.00 36.99 3.55
1431 4114 3.914312 ACTGTTACAGAGAACCATCGTG 58.086 45.455 20.07 0.00 35.18 4.35
1455 4163 3.594603 AGACGACATGGTCTAAACAGG 57.405 47.619 3.08 0.00 45.14 4.00
1528 4237 4.702131 ACAGATCAAAGAAGCACCATTACC 59.298 41.667 0.00 0.00 0.00 2.85
1559 4268 7.552687 GGGACAAGAACTGAACATGATACATAA 59.447 37.037 0.00 0.00 0.00 1.90
1561 4270 5.882557 GGGACAAGAACTGAACATGATACAT 59.117 40.000 0.00 0.00 0.00 2.29
1581 4296 2.027625 CAAGTGAAGCGACGGGGAC 61.028 63.158 0.00 0.00 0.00 4.46
1601 4322 1.059098 AGCAGGAACCATGACACAGA 58.941 50.000 0.00 0.00 0.00 3.41
1602 4323 2.768253 TAGCAGGAACCATGACACAG 57.232 50.000 0.00 0.00 0.00 3.66
1604 4325 3.266510 TCATAGCAGGAACCATGACAC 57.733 47.619 0.00 0.00 0.00 3.67
1605 4326 3.713248 AGATCATAGCAGGAACCATGACA 59.287 43.478 0.00 0.00 30.64 3.58
1606 4327 4.348863 AGATCATAGCAGGAACCATGAC 57.651 45.455 0.00 0.00 30.64 3.06
1607 4328 4.164796 ACAAGATCATAGCAGGAACCATGA 59.835 41.667 0.00 0.00 32.32 3.07
1608 4329 4.458397 ACAAGATCATAGCAGGAACCATG 58.542 43.478 0.00 0.00 0.00 3.66
1609 4330 4.785346 ACAAGATCATAGCAGGAACCAT 57.215 40.909 0.00 0.00 0.00 3.55
1610 4331 4.574674 AACAAGATCATAGCAGGAACCA 57.425 40.909 0.00 0.00 0.00 3.67
1611 4332 4.702131 ACAAACAAGATCATAGCAGGAACC 59.298 41.667 0.00 0.00 0.00 3.62
1616 4337 5.410746 ACTCACACAAACAAGATCATAGCAG 59.589 40.000 0.00 0.00 0.00 4.24
1627 4351 5.296780 GGAGATTCAGAACTCACACAAACAA 59.703 40.000 12.19 0.00 35.17 2.83
1650 4392 6.624423 AGTTGCATAGCATAAAAGAAGTTGG 58.376 36.000 0.00 0.00 38.76 3.77
1651 4393 9.793252 ATAAGTTGCATAGCATAAAAGAAGTTG 57.207 29.630 0.00 0.00 38.76 3.16
1652 4394 9.793252 CATAAGTTGCATAGCATAAAAGAAGTT 57.207 29.630 0.00 0.00 38.76 2.66
1653 4395 8.960591 ACATAAGTTGCATAGCATAAAAGAAGT 58.039 29.630 0.00 0.00 38.76 3.01
1654 4396 9.793252 AACATAAGTTGCATAGCATAAAAGAAG 57.207 29.630 0.00 0.00 38.76 2.85
1655 4397 9.787532 GAACATAAGTTGCATAGCATAAAAGAA 57.212 29.630 0.00 0.00 38.76 2.52
1656 4398 8.955388 TGAACATAAGTTGCATAGCATAAAAGA 58.045 29.630 0.00 0.00 38.76 2.52
1657 4399 9.229784 CTGAACATAAGTTGCATAGCATAAAAG 57.770 33.333 0.00 0.00 38.76 2.27
1658 4400 8.955388 TCTGAACATAAGTTGCATAGCATAAAA 58.045 29.630 0.00 0.00 38.76 1.52
1659 4401 8.504812 TCTGAACATAAGTTGCATAGCATAAA 57.495 30.769 0.00 0.00 38.76 1.40
1660 4402 8.681486 ATCTGAACATAAGTTGCATAGCATAA 57.319 30.769 0.00 0.00 38.76 1.90
1661 4403 8.681486 AATCTGAACATAAGTTGCATAGCATA 57.319 30.769 0.00 0.00 38.76 3.14
1662 4404 7.578310 AATCTGAACATAAGTTGCATAGCAT 57.422 32.000 0.00 0.00 38.76 3.79
1663 4405 7.094248 ACAAATCTGAACATAAGTTGCATAGCA 60.094 33.333 0.00 0.00 38.30 3.49
1664 4406 7.219535 CACAAATCTGAACATAAGTTGCATAGC 59.780 37.037 0.00 0.00 38.30 2.97
1665 4407 8.453320 TCACAAATCTGAACATAAGTTGCATAG 58.547 33.333 0.00 0.00 38.30 2.23
1666 4408 8.334263 TCACAAATCTGAACATAAGTTGCATA 57.666 30.769 0.00 0.00 38.30 3.14
1667 4409 7.218228 TCACAAATCTGAACATAAGTTGCAT 57.782 32.000 0.00 0.00 38.30 3.96
1668 4410 6.631971 TCACAAATCTGAACATAAGTTGCA 57.368 33.333 0.00 0.00 38.30 4.08
1676 4418 3.119245 GCCATGCTCACAAATCTGAACAT 60.119 43.478 0.00 0.00 28.83 2.71
1682 4424 1.284198 AGAGGCCATGCTCACAAATCT 59.716 47.619 5.01 0.00 0.00 2.40
1693 4443 3.070734 AGCAGAGTATTACAGAGGCCATG 59.929 47.826 5.01 5.87 0.00 3.66
1707 4459 3.506067 TCAGAATCGTTGTCAGCAGAGTA 59.494 43.478 0.00 0.00 0.00 2.59
1752 4510 8.862550 AGCTGAAAACTGAAATTAAGAAACAG 57.137 30.769 0.00 0.00 35.14 3.16
1921 4744 3.769844 TGACTGAAACTGGGTCTATCTCC 59.230 47.826 0.00 0.00 0.00 3.71
1924 4747 5.598830 TCCTATGACTGAAACTGGGTCTATC 59.401 44.000 0.00 0.00 0.00 2.08
1931 4754 3.209410 GCCATCCTATGACTGAAACTGG 58.791 50.000 0.00 0.00 0.00 4.00
1963 4786 1.892819 CGAGCAGAAGGAAGGGCTGA 61.893 60.000 0.00 0.00 36.59 4.26
1981 4804 2.483745 CATGGCAGTTGAGCAGCG 59.516 61.111 0.00 0.00 35.83 5.18
1985 4808 2.707849 CCTGGCATGGCAGTTGAGC 61.708 63.158 37.95 2.87 0.00 4.26
1986 4809 0.395311 ATCCTGGCATGGCAGTTGAG 60.395 55.000 37.95 26.37 0.00 3.02
1987 4810 0.394762 GATCCTGGCATGGCAGTTGA 60.395 55.000 37.95 30.68 0.00 3.18
1990 4813 2.191375 CGATCCTGGCATGGCAGT 59.809 61.111 37.95 26.05 0.00 4.40
1991 4814 3.285215 GCGATCCTGGCATGGCAG 61.285 66.667 35.71 35.71 0.00 4.85
1992 4815 4.881440 GGCGATCCTGGCATGGCA 62.881 66.667 21.97 21.97 0.00 4.92
1993 4816 2.680974 TTAGGCGATCCTGGCATGGC 62.681 60.000 13.29 13.29 44.08 4.40
1994 4817 0.179020 TTTAGGCGATCCTGGCATGG 60.179 55.000 0.00 0.00 44.08 3.66
1995 4818 1.334869 GTTTTAGGCGATCCTGGCATG 59.665 52.381 0.00 0.00 44.08 4.06
1996 4819 1.680338 GTTTTAGGCGATCCTGGCAT 58.320 50.000 0.00 0.00 44.08 4.40
1997 4820 0.742990 CGTTTTAGGCGATCCTGGCA 60.743 55.000 0.00 0.00 44.08 4.92
2010 4833 2.287547 ACGAGCAGACCGTAACGTTTTA 60.288 45.455 5.91 0.00 38.61 1.52
2034 4857 2.906897 ACACGCCCTTTGTGCCTG 60.907 61.111 0.00 0.00 41.03 4.85
2035 4858 2.594592 GACACGCCCTTTGTGCCT 60.595 61.111 0.00 0.00 41.03 4.75
2036 4859 3.670377 GGACACGCCCTTTGTGCC 61.670 66.667 0.00 0.00 41.03 5.01
2037 4860 4.025401 CGGACACGCCCTTTGTGC 62.025 66.667 0.00 0.00 41.03 4.57
2038 4861 2.590575 ACGGACACGCCCTTTGTG 60.591 61.111 0.00 0.00 46.04 3.33
2039 4862 2.280592 GACGGACACGCCCTTTGT 60.281 61.111 0.00 0.00 46.04 2.83
2040 4863 2.030562 AGACGGACACGCCCTTTG 59.969 61.111 0.00 0.00 46.04 2.77
2041 4864 2.030562 CAGACGGACACGCCCTTT 59.969 61.111 0.00 0.00 46.04 3.11
2042 4865 4.681978 GCAGACGGACACGCCCTT 62.682 66.667 0.00 0.00 46.04 3.95
2045 4868 4.664677 ACAGCAGACGGACACGCC 62.665 66.667 0.00 0.00 46.04 5.68
2046 4869 0.942410 TAAACAGCAGACGGACACGC 60.942 55.000 0.00 0.00 46.04 5.34
2048 4871 1.429463 CCTAAACAGCAGACGGACAC 58.571 55.000 0.00 0.00 0.00 3.67
2049 4872 0.320421 GCCTAAACAGCAGACGGACA 60.320 55.000 0.00 0.00 0.00 4.02
2050 4873 0.320421 TGCCTAAACAGCAGACGGAC 60.320 55.000 0.00 0.00 34.69 4.79
2051 4874 0.613260 ATGCCTAAACAGCAGACGGA 59.387 50.000 0.00 0.00 44.90 4.69
2052 4875 1.009829 GATGCCTAAACAGCAGACGG 58.990 55.000 0.00 0.00 44.90 4.79
2053 4876 1.662629 CAGATGCCTAAACAGCAGACG 59.337 52.381 0.00 0.00 44.90 4.18
2054 4877 2.704572 ACAGATGCCTAAACAGCAGAC 58.295 47.619 0.00 0.00 44.90 3.51
2055 4878 3.076621 CAACAGATGCCTAAACAGCAGA 58.923 45.455 0.00 0.00 44.90 4.26
2056 4879 2.816087 ACAACAGATGCCTAAACAGCAG 59.184 45.455 0.00 0.00 44.90 4.24
2057 4880 2.862541 ACAACAGATGCCTAAACAGCA 58.137 42.857 0.00 0.00 45.94 4.41
2058 4881 3.503748 AGAACAACAGATGCCTAAACAGC 59.496 43.478 0.00 0.00 0.00 4.40
2059 4882 4.756642 TCAGAACAACAGATGCCTAAACAG 59.243 41.667 0.00 0.00 0.00 3.16
2060 4883 4.515191 GTCAGAACAACAGATGCCTAAACA 59.485 41.667 0.00 0.00 0.00 2.83
2061 4884 4.757149 AGTCAGAACAACAGATGCCTAAAC 59.243 41.667 0.00 0.00 0.00 2.01
2062 4885 4.973168 AGTCAGAACAACAGATGCCTAAA 58.027 39.130 0.00 0.00 0.00 1.85
2063 4886 4.569943 GAGTCAGAACAACAGATGCCTAA 58.430 43.478 0.00 0.00 0.00 2.69
2064 4887 3.367395 CGAGTCAGAACAACAGATGCCTA 60.367 47.826 0.00 0.00 0.00 3.93
2065 4888 2.611473 CGAGTCAGAACAACAGATGCCT 60.611 50.000 0.00 0.00 0.00 4.75
2066 4889 1.728971 CGAGTCAGAACAACAGATGCC 59.271 52.381 0.00 0.00 0.00 4.40
2067 4890 1.728971 CCGAGTCAGAACAACAGATGC 59.271 52.381 0.00 0.00 0.00 3.91
2068 4891 3.032017 ACCGAGTCAGAACAACAGATG 57.968 47.619 0.00 0.00 0.00 2.90
2069 4892 3.827302 ACTACCGAGTCAGAACAACAGAT 59.173 43.478 0.00 0.00 0.00 2.90
2070 4893 3.220110 ACTACCGAGTCAGAACAACAGA 58.780 45.455 0.00 0.00 0.00 3.41
2071 4894 3.644884 ACTACCGAGTCAGAACAACAG 57.355 47.619 0.00 0.00 0.00 3.16
2072 4895 4.082408 CCATACTACCGAGTCAGAACAACA 60.082 45.833 0.00 0.00 37.10 3.33
2073 4896 4.421948 CCATACTACCGAGTCAGAACAAC 58.578 47.826 0.00 0.00 37.10 3.32
2074 4897 3.119245 GCCATACTACCGAGTCAGAACAA 60.119 47.826 0.00 0.00 37.10 2.83
2075 4898 2.426024 GCCATACTACCGAGTCAGAACA 59.574 50.000 0.00 0.00 37.10 3.18
2076 4899 2.223758 GGCCATACTACCGAGTCAGAAC 60.224 54.545 0.00 0.00 37.10 3.01
2077 4900 2.029623 GGCCATACTACCGAGTCAGAA 58.970 52.381 0.00 0.00 37.10 3.02
2078 4901 1.688772 GGCCATACTACCGAGTCAGA 58.311 55.000 0.00 0.00 37.10 3.27
2086 4909 2.965572 TTACACACGGCCATACTACC 57.034 50.000 2.24 0.00 0.00 3.18
2087 4910 4.690122 AGATTTACACACGGCCATACTAC 58.310 43.478 2.24 0.00 0.00 2.73
2088 4911 4.647853 AGAGATTTACACACGGCCATACTA 59.352 41.667 2.24 0.00 0.00 1.82
2089 4912 3.451178 AGAGATTTACACACGGCCATACT 59.549 43.478 2.24 0.00 0.00 2.12
2090 4913 3.555956 CAGAGATTTACACACGGCCATAC 59.444 47.826 2.24 0.00 0.00 2.39
2091 4914 3.792401 CAGAGATTTACACACGGCCATA 58.208 45.455 2.24 0.00 0.00 2.74
2092 4915 2.632377 CAGAGATTTACACACGGCCAT 58.368 47.619 2.24 0.00 0.00 4.40
2093 4916 1.943968 GCAGAGATTTACACACGGCCA 60.944 52.381 2.24 0.00 0.00 5.36
2094 4917 0.727398 GCAGAGATTTACACACGGCC 59.273 55.000 0.00 0.00 0.00 6.13
2095 4918 1.394917 CTGCAGAGATTTACACACGGC 59.605 52.381 8.42 0.00 0.00 5.68
2096 4919 2.668457 GTCTGCAGAGATTTACACACGG 59.332 50.000 18.89 0.00 0.00 4.94
2097 4920 3.317150 TGTCTGCAGAGATTTACACACG 58.683 45.455 18.89 0.00 0.00 4.49
2098 4921 4.376413 CGTTGTCTGCAGAGATTTACACAC 60.376 45.833 18.89 8.08 0.00 3.82
2099 4922 3.740832 CGTTGTCTGCAGAGATTTACACA 59.259 43.478 18.89 6.59 0.00 3.72
2100 4923 3.123621 CCGTTGTCTGCAGAGATTTACAC 59.876 47.826 18.89 9.60 0.00 2.90
2101 4924 3.325870 CCGTTGTCTGCAGAGATTTACA 58.674 45.455 18.89 8.23 0.00 2.41
2102 4925 2.094417 GCCGTTGTCTGCAGAGATTTAC 59.906 50.000 18.89 10.38 0.00 2.01
2103 4926 2.028112 AGCCGTTGTCTGCAGAGATTTA 60.028 45.455 18.89 0.00 0.00 1.40
2104 4927 1.160137 GCCGTTGTCTGCAGAGATTT 58.840 50.000 18.89 0.00 0.00 2.17
2105 4928 0.322975 AGCCGTTGTCTGCAGAGATT 59.677 50.000 18.89 0.00 0.00 2.40
2106 4929 0.108424 GAGCCGTTGTCTGCAGAGAT 60.108 55.000 18.89 2.98 0.00 2.75
2107 4930 1.290324 GAGCCGTTGTCTGCAGAGA 59.710 57.895 18.89 14.32 0.00 3.10
2108 4931 0.390866 ATGAGCCGTTGTCTGCAGAG 60.391 55.000 18.89 6.06 0.00 3.35
2109 4932 0.894835 TATGAGCCGTTGTCTGCAGA 59.105 50.000 13.74 13.74 0.00 4.26
2110 4933 1.394917 GTTATGAGCCGTTGTCTGCAG 59.605 52.381 7.63 7.63 0.00 4.41
2111 4934 1.001974 AGTTATGAGCCGTTGTCTGCA 59.998 47.619 0.00 0.00 0.00 4.41
2112 4935 1.726853 AGTTATGAGCCGTTGTCTGC 58.273 50.000 0.00 0.00 0.00 4.26
2113 4936 3.325870 TCAAGTTATGAGCCGTTGTCTG 58.674 45.455 0.00 0.00 33.04 3.51
2114 4937 3.678056 TCAAGTTATGAGCCGTTGTCT 57.322 42.857 0.00 0.00 33.04 3.41
2124 4947 6.875726 CAGAGAAACATCCACTCAAGTTATGA 59.124 38.462 8.52 0.00 36.38 2.15
2125 4948 6.652481 ACAGAGAAACATCCACTCAAGTTATG 59.348 38.462 0.00 2.25 33.69 1.90
2126 4949 6.773638 ACAGAGAAACATCCACTCAAGTTAT 58.226 36.000 0.00 0.00 33.69 1.89
2127 4950 6.174720 ACAGAGAAACATCCACTCAAGTTA 57.825 37.500 0.00 0.00 33.69 2.24
2128 4951 5.041191 ACAGAGAAACATCCACTCAAGTT 57.959 39.130 0.00 0.00 33.69 2.66
2129 4952 4.696479 ACAGAGAAACATCCACTCAAGT 57.304 40.909 0.00 0.00 33.69 3.16
2130 4953 4.453819 GGAACAGAGAAACATCCACTCAAG 59.546 45.833 0.00 0.00 33.69 3.02
2131 4954 4.141505 TGGAACAGAGAAACATCCACTCAA 60.142 41.667 0.00 0.00 35.33 3.02
2132 4955 3.390967 TGGAACAGAGAAACATCCACTCA 59.609 43.478 0.00 0.00 35.33 3.41
2133 4956 4.008074 TGGAACAGAGAAACATCCACTC 57.992 45.455 0.00 0.00 35.33 3.51
2146 4969 7.147932 TCAAAATGTGTTGAGAAATGGAACAGA 60.148 33.333 0.00 0.00 35.29 3.41
2147 4970 6.979817 TCAAAATGTGTTGAGAAATGGAACAG 59.020 34.615 0.00 0.00 35.29 3.16
2148 4971 6.756074 GTCAAAATGTGTTGAGAAATGGAACA 59.244 34.615 0.00 0.00 39.85 3.18
2149 4972 6.980397 AGTCAAAATGTGTTGAGAAATGGAAC 59.020 34.615 0.00 0.00 38.17 3.62
2150 4973 7.111247 AGTCAAAATGTGTTGAGAAATGGAA 57.889 32.000 0.00 0.00 38.17 3.53
2151 4974 6.713762 AGTCAAAATGTGTTGAGAAATGGA 57.286 33.333 0.00 0.00 38.17 3.41
2152 4975 7.543172 CCATAGTCAAAATGTGTTGAGAAATGG 59.457 37.037 6.68 6.68 38.17 3.16
2153 4976 7.543172 CCCATAGTCAAAATGTGTTGAGAAATG 59.457 37.037 0.00 0.00 38.17 2.32
2154 4977 7.233348 ACCCATAGTCAAAATGTGTTGAGAAAT 59.767 33.333 0.00 0.00 38.17 2.17
2155 4978 6.549364 ACCCATAGTCAAAATGTGTTGAGAAA 59.451 34.615 0.00 0.00 38.17 2.52
2156 4979 6.068010 ACCCATAGTCAAAATGTGTTGAGAA 58.932 36.000 0.00 0.00 38.17 2.87
2157 4980 5.630121 ACCCATAGTCAAAATGTGTTGAGA 58.370 37.500 0.00 0.00 38.17 3.27
2158 4981 5.964958 ACCCATAGTCAAAATGTGTTGAG 57.035 39.130 0.00 0.00 38.17 3.02
2159 4982 7.520776 CGTTAACCCATAGTCAAAATGTGTTGA 60.521 37.037 0.00 0.00 35.14 3.18
2160 4983 6.580791 CGTTAACCCATAGTCAAAATGTGTTG 59.419 38.462 0.00 0.00 29.54 3.33
2161 4984 6.487331 TCGTTAACCCATAGTCAAAATGTGTT 59.513 34.615 0.00 0.00 31.30 3.32
2162 4985 5.998981 TCGTTAACCCATAGTCAAAATGTGT 59.001 36.000 0.00 0.00 0.00 3.72
2163 4986 6.403200 CCTCGTTAACCCATAGTCAAAATGTG 60.403 42.308 0.00 0.00 0.00 3.21
2164 4987 5.646360 CCTCGTTAACCCATAGTCAAAATGT 59.354 40.000 0.00 0.00 0.00 2.71
2165 4988 5.448632 GCCTCGTTAACCCATAGTCAAAATG 60.449 44.000 0.00 0.00 0.00 2.32
2166 4989 4.638865 GCCTCGTTAACCCATAGTCAAAAT 59.361 41.667 0.00 0.00 0.00 1.82
2167 4990 4.004982 GCCTCGTTAACCCATAGTCAAAA 58.995 43.478 0.00 0.00 0.00 2.44
2168 4991 3.262405 AGCCTCGTTAACCCATAGTCAAA 59.738 43.478 0.00 0.00 0.00 2.69
2169 4992 2.835764 AGCCTCGTTAACCCATAGTCAA 59.164 45.455 0.00 0.00 0.00 3.18
2170 4993 2.463752 AGCCTCGTTAACCCATAGTCA 58.536 47.619 0.00 0.00 0.00 3.41
2171 4994 4.868314 ATAGCCTCGTTAACCCATAGTC 57.132 45.455 0.00 0.00 0.00 2.59
2172 4995 4.202326 CCAATAGCCTCGTTAACCCATAGT 60.202 45.833 0.00 0.00 0.00 2.12
2173 4996 4.315803 CCAATAGCCTCGTTAACCCATAG 58.684 47.826 0.00 0.00 0.00 2.23
2174 4997 3.495453 GCCAATAGCCTCGTTAACCCATA 60.495 47.826 0.00 0.00 34.35 2.74
2175 4998 2.748465 GCCAATAGCCTCGTTAACCCAT 60.748 50.000 0.00 0.00 34.35 4.00
2176 4999 1.407712 GCCAATAGCCTCGTTAACCCA 60.408 52.381 0.00 0.00 34.35 4.51
2177 5000 1.306148 GCCAATAGCCTCGTTAACCC 58.694 55.000 0.00 0.00 34.35 4.11
2188 5011 1.819632 CCTCCACACGGCCAATAGC 60.820 63.158 2.24 0.00 42.60 2.97
2189 5012 1.153168 CCCTCCACACGGCCAATAG 60.153 63.158 2.24 0.00 0.00 1.73
2190 5013 2.675242 CCCCTCCACACGGCCAATA 61.675 63.158 2.24 0.00 0.00 1.90
2191 5014 4.047125 CCCCTCCACACGGCCAAT 62.047 66.667 2.24 0.00 0.00 3.16
2197 5020 4.087892 CAGCCTCCCCTCCACACG 62.088 72.222 0.00 0.00 0.00 4.49
2198 5021 1.612442 TACAGCCTCCCCTCCACAC 60.612 63.158 0.00 0.00 0.00 3.82
2199 5022 1.306141 CTACAGCCTCCCCTCCACA 60.306 63.158 0.00 0.00 0.00 4.17
2200 5023 2.736826 GCTACAGCCTCCCCTCCAC 61.737 68.421 0.00 0.00 34.31 4.02
2201 5024 2.365635 GCTACAGCCTCCCCTCCA 60.366 66.667 0.00 0.00 34.31 3.86
2202 5025 2.365635 TGCTACAGCCTCCCCTCC 60.366 66.667 0.00 0.00 41.18 4.30
2203 5026 1.381872 TCTGCTACAGCCTCCCCTC 60.382 63.158 0.00 0.00 41.18 4.30
2204 5027 1.687493 GTCTGCTACAGCCTCCCCT 60.687 63.158 0.00 0.00 41.18 4.79
2205 5028 2.904131 GTCTGCTACAGCCTCCCC 59.096 66.667 0.00 0.00 41.18 4.81
2206 5029 2.010582 CTCGTCTGCTACAGCCTCCC 62.011 65.000 0.00 0.00 41.18 4.30
2207 5030 1.316706 ACTCGTCTGCTACAGCCTCC 61.317 60.000 0.00 0.00 41.18 4.30
2208 5031 1.064357 GTACTCGTCTGCTACAGCCTC 59.936 57.143 0.00 0.00 41.18 4.70
2209 5032 1.096416 GTACTCGTCTGCTACAGCCT 58.904 55.000 0.00 0.00 41.18 4.58
2210 5033 0.809385 TGTACTCGTCTGCTACAGCC 59.191 55.000 0.00 0.00 41.18 4.85
2211 5034 2.159366 ACATGTACTCGTCTGCTACAGC 60.159 50.000 0.00 0.00 42.50 4.40
2212 5035 3.766676 ACATGTACTCGTCTGCTACAG 57.233 47.619 0.00 0.00 0.00 2.74
2213 5036 4.004982 TGTACATGTACTCGTCTGCTACA 58.995 43.478 30.69 10.94 37.00 2.74
2214 5037 4.611310 TGTACATGTACTCGTCTGCTAC 57.389 45.455 30.69 8.54 37.00 3.58
2215 5038 4.036380 CCATGTACATGTACTCGTCTGCTA 59.964 45.833 30.69 12.33 37.11 3.49
2216 5039 3.181486 CCATGTACATGTACTCGTCTGCT 60.181 47.826 30.69 7.90 37.11 4.24
2217 5040 3.116300 CCATGTACATGTACTCGTCTGC 58.884 50.000 30.69 8.02 37.11 4.26
2218 5041 4.105486 CACCATGTACATGTACTCGTCTG 58.895 47.826 30.69 20.16 37.11 3.51
2219 5042 3.130516 CCACCATGTACATGTACTCGTCT 59.869 47.826 30.69 11.99 37.11 4.18
2220 5043 3.119245 ACCACCATGTACATGTACTCGTC 60.119 47.826 30.69 10.03 37.11 4.20
2221 5044 2.829720 ACCACCATGTACATGTACTCGT 59.170 45.455 30.69 21.65 37.11 4.18
2222 5045 3.186909 CACCACCATGTACATGTACTCG 58.813 50.000 30.69 22.21 37.11 4.18
2223 5046 3.531538 CCACCACCATGTACATGTACTC 58.468 50.000 30.69 11.39 37.11 2.59
2224 5047 2.355716 GCCACCACCATGTACATGTACT 60.356 50.000 30.69 16.95 37.11 2.73
2225 5048 2.014128 GCCACCACCATGTACATGTAC 58.986 52.381 29.25 25.99 37.11 2.90
2226 5049 1.406205 CGCCACCACCATGTACATGTA 60.406 52.381 29.25 0.08 37.11 2.29
2227 5050 0.676466 CGCCACCACCATGTACATGT 60.676 55.000 29.25 17.22 37.11 3.21
2228 5051 1.992233 GCGCCACCACCATGTACATG 61.992 60.000 26.02 26.02 38.51 3.21
2229 5052 1.748879 GCGCCACCACCATGTACAT 60.749 57.895 1.41 1.41 0.00 2.29
2230 5053 2.359354 GCGCCACCACCATGTACA 60.359 61.111 0.00 0.00 0.00 2.90
2231 5054 3.496131 CGCGCCACCACCATGTAC 61.496 66.667 0.00 0.00 0.00 2.90
2232 5055 4.769063 CCGCGCCACCACCATGTA 62.769 66.667 0.00 0.00 0.00 2.29
2253 5076 3.847602 CTCTGCCTCGAGCCCCAG 61.848 72.222 6.99 12.59 42.71 4.45
2256 5079 4.154347 CACCTCTGCCTCGAGCCC 62.154 72.222 6.99 0.16 42.71 5.19
2257 5080 3.071206 TCACCTCTGCCTCGAGCC 61.071 66.667 6.99 0.00 42.71 4.70
2258 5081 2.493973 CTCACCTCTGCCTCGAGC 59.506 66.667 6.99 3.23 44.14 5.03
2259 5082 1.680651 ACCTCACCTCTGCCTCGAG 60.681 63.158 5.13 5.13 0.00 4.04
2260 5083 1.979155 CACCTCACCTCTGCCTCGA 60.979 63.158 0.00 0.00 0.00 4.04
2261 5084 2.575993 CACCTCACCTCTGCCTCG 59.424 66.667 0.00 0.00 0.00 4.63
2262 5085 2.985456 CCACCTCACCTCTGCCTC 59.015 66.667 0.00 0.00 0.00 4.70
2263 5086 3.325753 GCCACCTCACCTCTGCCT 61.326 66.667 0.00 0.00 0.00 4.75
2264 5087 4.767255 CGCCACCTCACCTCTGCC 62.767 72.222 0.00 0.00 0.00 4.85
2265 5088 3.941657 GACGCCACCTCACCTCTGC 62.942 68.421 0.00 0.00 0.00 4.26
2266 5089 2.262915 GACGCCACCTCACCTCTG 59.737 66.667 0.00 0.00 0.00 3.35
2267 5090 2.118513 AGACGCCACCTCACCTCT 59.881 61.111 0.00 0.00 0.00 3.69
2268 5091 2.262915 CAGACGCCACCTCACCTC 59.737 66.667 0.00 0.00 0.00 3.85
2269 5092 2.203640 TCAGACGCCACCTCACCT 60.204 61.111 0.00 0.00 0.00 4.00
2270 5093 2.048127 GTCAGACGCCACCTCACC 60.048 66.667 0.00 0.00 0.00 4.02
2271 5094 2.430921 CGTCAGACGCCACCTCAC 60.431 66.667 10.66 0.00 33.65 3.51
2272 5095 2.596338 TCGTCAGACGCCACCTCA 60.596 61.111 18.62 0.00 42.21 3.86
2273 5096 2.179517 CTCGTCAGACGCCACCTC 59.820 66.667 18.62 0.00 42.21 3.85
2274 5097 2.282251 TCTCGTCAGACGCCACCT 60.282 61.111 18.62 0.00 42.21 4.00
2275 5098 2.179517 CTCTCGTCAGACGCCACC 59.820 66.667 18.62 0.00 42.21 4.61
2276 5099 1.442857 CACTCTCGTCAGACGCCAC 60.443 63.158 18.62 0.00 42.21 5.01
2277 5100 1.853114 GACACTCTCGTCAGACGCCA 61.853 60.000 18.62 5.82 42.21 5.69
2278 5101 1.154188 GACACTCTCGTCAGACGCC 60.154 63.158 18.62 0.00 42.21 5.68
2279 5102 1.510204 CGACACTCTCGTCAGACGC 60.510 63.158 18.62 1.26 42.21 5.19
2280 5103 0.722282 ATCGACACTCTCGTCAGACG 59.278 55.000 17.33 17.33 43.45 4.18
2281 5104 2.904011 AATCGACACTCTCGTCAGAC 57.096 50.000 0.00 0.00 43.45 3.51
2282 5105 3.075148 AGAAATCGACACTCTCGTCAGA 58.925 45.455 0.00 0.00 43.45 3.27
2283 5106 3.479505 AGAAATCGACACTCTCGTCAG 57.520 47.619 0.00 0.00 43.45 3.51
2284 5107 3.252458 TGAAGAAATCGACACTCTCGTCA 59.748 43.478 0.00 0.00 43.45 4.35
2285 5108 3.822996 TGAAGAAATCGACACTCTCGTC 58.177 45.455 0.00 0.00 43.45 4.20
2286 5109 3.502595 TCTGAAGAAATCGACACTCTCGT 59.497 43.478 0.00 0.00 43.45 4.18
2287 5110 4.084889 TCTGAAGAAATCGACACTCTCG 57.915 45.455 0.00 0.00 44.44 4.04
2288 5111 9.737427 TTTATATCTGAAGAAATCGACACTCTC 57.263 33.333 0.00 0.00 0.00 3.20
2300 5123 9.871238 GGCGAACCTATATTTATATCTGAAGAA 57.129 33.333 0.00 0.00 0.00 2.52
2314 5137 8.294538 CCTAATTAGGAGGAGGCGAACCTATAT 61.295 44.444 24.99 0.00 46.63 0.86
2315 5138 7.031969 CCTAATTAGGAGGAGGCGAACCTATA 61.032 46.154 24.99 0.00 46.63 1.31
2316 5139 6.279709 CCTAATTAGGAGGAGGCGAACCTAT 61.280 48.000 24.99 0.00 46.63 2.57
2317 5140 4.995881 CCTAATTAGGAGGAGGCGAACCTA 60.996 50.000 24.99 0.00 46.63 3.08
2319 5142 2.037381 CCTAATTAGGAGGAGGCGAACC 59.963 54.545 24.99 0.00 46.63 3.62
2320 5143 2.548280 GCCTAATTAGGAGGAGGCGAAC 60.548 54.545 31.78 8.88 46.63 3.95
2321 5144 1.692519 GCCTAATTAGGAGGAGGCGAA 59.307 52.381 31.78 0.00 46.63 4.70
2322 5145 1.339097 GCCTAATTAGGAGGAGGCGA 58.661 55.000 31.78 0.00 46.63 5.54
2323 5146 3.917072 GCCTAATTAGGAGGAGGCG 57.083 57.895 31.78 6.26 46.63 5.52
2325 5148 4.020662 CAGCTTAGCCTAATTAGGAGGAGG 60.021 50.000 31.78 17.36 46.63 4.30
2326 5149 4.591072 ACAGCTTAGCCTAATTAGGAGGAG 59.409 45.833 31.78 23.45 46.63 3.69
2327 5150 4.557705 ACAGCTTAGCCTAATTAGGAGGA 58.442 43.478 31.78 14.59 46.63 3.71
2328 5151 4.965200 ACAGCTTAGCCTAATTAGGAGG 57.035 45.455 31.78 18.42 46.63 4.30
2329 5152 5.301555 GGAACAGCTTAGCCTAATTAGGAG 58.698 45.833 31.78 21.37 46.63 3.69
2330 5153 4.102681 GGGAACAGCTTAGCCTAATTAGGA 59.897 45.833 31.78 11.92 46.63 2.94
2331 5154 4.103311 AGGGAACAGCTTAGCCTAATTAGG 59.897 45.833 24.90 24.90 46.42 2.69
2332 5155 5.059833 CAGGGAACAGCTTAGCCTAATTAG 58.940 45.833 5.43 5.43 0.00 1.73
2333 5156 4.473559 ACAGGGAACAGCTTAGCCTAATTA 59.526 41.667 0.00 0.00 0.00 1.40
2334 5157 3.267031 ACAGGGAACAGCTTAGCCTAATT 59.733 43.478 0.00 0.00 0.00 1.40
2335 5158 2.846827 ACAGGGAACAGCTTAGCCTAAT 59.153 45.455 0.00 0.00 0.00 1.73
2336 5159 2.236395 GACAGGGAACAGCTTAGCCTAA 59.764 50.000 0.00 0.00 0.00 2.69
2337 5160 1.831736 GACAGGGAACAGCTTAGCCTA 59.168 52.381 0.00 0.00 0.00 3.93
2338 5161 0.615850 GACAGGGAACAGCTTAGCCT 59.384 55.000 0.00 0.00 0.00 4.58
2339 5162 0.324943 TGACAGGGAACAGCTTAGCC 59.675 55.000 0.00 0.00 0.00 3.93
2340 5163 1.276421 TCTGACAGGGAACAGCTTAGC 59.724 52.381 1.81 0.00 34.57 3.09
2341 5164 2.093764 CCTCTGACAGGGAACAGCTTAG 60.094 54.545 3.10 0.00 38.91 2.18
2342 5165 1.902508 CCTCTGACAGGGAACAGCTTA 59.097 52.381 3.10 0.00 38.91 3.09
2343 5166 0.689623 CCTCTGACAGGGAACAGCTT 59.310 55.000 3.10 0.00 38.91 3.74
2344 5167 0.178921 TCCTCTGACAGGGAACAGCT 60.179 55.000 3.10 0.00 43.67 4.24
2345 5168 0.908198 ATCCTCTGACAGGGAACAGC 59.092 55.000 3.10 0.00 43.67 4.40
2346 5169 1.209019 CCATCCTCTGACAGGGAACAG 59.791 57.143 3.10 4.22 43.67 3.16
2347 5170 1.279496 CCATCCTCTGACAGGGAACA 58.721 55.000 3.10 0.00 43.67 3.18
2348 5171 0.107459 GCCATCCTCTGACAGGGAAC 60.107 60.000 3.10 0.53 43.67 3.62
2349 5172 0.547471 TGCCATCCTCTGACAGGGAA 60.547 55.000 3.10 0.00 43.67 3.97
2350 5173 0.979709 CTGCCATCCTCTGACAGGGA 60.980 60.000 3.10 9.42 43.67 4.20
2351 5174 1.270414 ACTGCCATCCTCTGACAGGG 61.270 60.000 1.81 0.00 43.67 4.45
2352 5175 0.177604 GACTGCCATCCTCTGACAGG 59.822 60.000 1.81 0.00 45.15 4.00
2353 5176 0.177604 GGACTGCCATCCTCTGACAG 59.822 60.000 0.00 0.00 35.68 3.51
2354 5177 0.252421 AGGACTGCCATCCTCTGACA 60.252 55.000 0.00 0.00 46.92 3.58
2355 5178 2.601664 AGGACTGCCATCCTCTGAC 58.398 57.895 0.00 0.00 46.92 3.51
2367 5190 0.251077 AAGGGCTGAAGCAAGGACTG 60.251 55.000 4.43 0.00 44.36 3.51
2368 5191 0.037447 GAAGGGCTGAAGCAAGGACT 59.963 55.000 4.43 0.00 44.36 3.85
2369 5192 0.962855 GGAAGGGCTGAAGCAAGGAC 60.963 60.000 4.43 0.00 44.36 3.85
2370 5193 1.136329 AGGAAGGGCTGAAGCAAGGA 61.136 55.000 4.43 0.00 44.36 3.36
2371 5194 0.251519 AAGGAAGGGCTGAAGCAAGG 60.252 55.000 4.43 0.00 44.36 3.61
2372 5195 1.172175 GAAGGAAGGGCTGAAGCAAG 58.828 55.000 4.43 0.00 44.36 4.01
2373 5196 0.773644 AGAAGGAAGGGCTGAAGCAA 59.226 50.000 4.43 0.00 44.36 3.91
2374 5197 0.037303 CAGAAGGAAGGGCTGAAGCA 59.963 55.000 4.43 0.00 44.36 3.91
2375 5198 1.311651 GCAGAAGGAAGGGCTGAAGC 61.312 60.000 0.00 0.00 41.14 3.86
2376 5199 0.327591 AGCAGAAGGAAGGGCTGAAG 59.672 55.000 0.00 0.00 34.83 3.02
2377 5200 2.468015 AGCAGAAGGAAGGGCTGAA 58.532 52.632 0.00 0.00 34.83 3.02
2378 5201 4.239991 AGCAGAAGGAAGGGCTGA 57.760 55.556 0.00 0.00 34.83 4.26
2379 5202 4.315588 CAGCAGAAGGAAGGGCTG 57.684 61.111 0.00 0.00 46.47 4.85
2380 5203 3.085223 CCAGCAGAAGGAAGGGCT 58.915 61.111 0.00 0.00 36.99 5.19
2381 5204 2.753446 GCCAGCAGAAGGAAGGGC 60.753 66.667 0.00 0.00 0.00 5.19
2382 5205 1.077858 GAGCCAGCAGAAGGAAGGG 60.078 63.158 0.00 0.00 0.00 3.95
2383 5206 0.037303 TTGAGCCAGCAGAAGGAAGG 59.963 55.000 0.00 0.00 0.00 3.46
2384 5207 1.163554 GTTGAGCCAGCAGAAGGAAG 58.836 55.000 0.00 0.00 0.00 3.46
2385 5208 0.767375 AGTTGAGCCAGCAGAAGGAA 59.233 50.000 0.00 0.00 0.00 3.36
2386 5209 0.035881 CAGTTGAGCCAGCAGAAGGA 59.964 55.000 0.00 0.00 0.00 3.36
2387 5210 1.584380 GCAGTTGAGCCAGCAGAAGG 61.584 60.000 0.00 0.00 0.00 3.46
2388 5211 1.874562 GCAGTTGAGCCAGCAGAAG 59.125 57.895 0.00 0.00 0.00 2.85
2389 5212 4.069869 GCAGTTGAGCCAGCAGAA 57.930 55.556 0.00 0.00 0.00 3.02
2397 5220 2.467826 GCGATCCTGGCAGTTGAGC 61.468 63.158 14.43 9.88 0.00 4.26
2398 5221 1.817099 GGCGATCCTGGCAGTTGAG 60.817 63.158 14.43 3.43 0.00 3.02
2399 5222 0.975556 TAGGCGATCCTGGCAGTTGA 60.976 55.000 14.43 4.74 44.08 3.18
2400 5223 0.107703 TTAGGCGATCCTGGCAGTTG 60.108 55.000 14.43 0.58 44.08 3.16
2401 5224 0.618458 TTTAGGCGATCCTGGCAGTT 59.382 50.000 14.43 0.00 44.08 3.16
2402 5225 0.618458 TTTTAGGCGATCCTGGCAGT 59.382 50.000 14.43 0.00 44.08 4.40
2403 5226 1.017387 GTTTTAGGCGATCCTGGCAG 58.983 55.000 7.75 7.75 44.08 4.85
2404 5227 0.742990 CGTTTTAGGCGATCCTGGCA 60.743 55.000 0.00 0.00 44.08 4.92
2405 5228 2.014594 CGTTTTAGGCGATCCTGGC 58.985 57.895 0.00 0.00 44.08 4.85
2406 5229 1.436983 GGCGTTTTAGGCGATCCTGG 61.437 60.000 0.00 0.00 44.08 4.45
2407 5230 0.462047 AGGCGTTTTAGGCGATCCTG 60.462 55.000 0.00 0.00 44.08 3.86
2408 5231 1.117150 TAGGCGTTTTAGGCGATCCT 58.883 50.000 0.00 0.00 46.57 3.24
2409 5232 1.944032 TTAGGCGTTTTAGGCGATCC 58.056 50.000 0.00 0.00 41.99 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.