Multiple sequence alignment - TraesCS7D01G476300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G476300 chr7D 100.000 4893 0 0 1 4893 587854179 587849287 0.000000e+00 9036.0
1 TraesCS7D01G476300 chr7A 94.056 1329 58 9 3531 4849 679818645 679817328 0.000000e+00 1997.0
2 TraesCS7D01G476300 chr7A 94.331 1129 36 13 2369 3470 679819780 679818653 0.000000e+00 1705.0
3 TraesCS7D01G476300 chr7A 84.272 941 66 33 1415 2321 679820671 679819779 0.000000e+00 843.0
4 TraesCS7D01G476300 chr7A 80.379 581 59 37 823 1370 679821223 679820665 1.650000e-104 390.0
5 TraesCS7D01G476300 chr7A 75.949 474 71 26 193 630 679822141 679821675 2.310000e-48 204.0
6 TraesCS7D01G476300 chr7B 84.262 1741 121 72 746 2402 659655773 659654102 0.000000e+00 1555.0
7 TraesCS7D01G476300 chr7B 91.706 1061 44 15 2437 3480 659654102 659653069 0.000000e+00 1432.0
8 TraesCS7D01G476300 chr7B 84.655 1375 139 36 3531 4849 659653069 659651711 0.000000e+00 1304.0
9 TraesCS7D01G476300 chr7B 96.226 53 1 1 1 53 570314296 570314347 8.730000e-13 86.1
10 TraesCS7D01G476300 chr7B 94.737 38 2 0 607 644 707611479 707611442 5.290000e-05 60.2
11 TraesCS7D01G476300 chr2B 88.015 1068 64 18 1320 2338 124150746 124151798 0.000000e+00 1205.0
12 TraesCS7D01G476300 chr5B 90.433 669 37 9 1684 2338 16395475 16394820 0.000000e+00 856.0
13 TraesCS7D01G476300 chr5B 84.075 427 26 11 1318 1704 16405263 16404839 1.660000e-99 374.0
14 TraesCS7D01G476300 chr2A 93.220 59 2 2 1 58 719476833 719476890 8.730000e-13 86.1
15 TraesCS7D01G476300 chrUn 92.453 53 3 1 1 53 95230030 95229979 1.890000e-09 75.0
16 TraesCS7D01G476300 chr1B 92.453 53 3 1 1 53 150605213 150605162 1.890000e-09 75.0
17 TraesCS7D01G476300 chr3D 85.938 64 7 2 1 63 250919217 250919279 3.160000e-07 67.6
18 TraesCS7D01G476300 chr5A 88.889 54 5 1 1 54 426588428 426588376 1.140000e-06 65.8
19 TraesCS7D01G476300 chr3B 95.122 41 2 0 17 57 800599028 800598988 1.140000e-06 65.8
20 TraesCS7D01G476300 chr5D 93.182 44 1 2 13 54 258258361 258258404 4.090000e-06 63.9
21 TraesCS7D01G476300 chr6A 86.792 53 6 1 1 53 510873519 510873570 1.900000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G476300 chr7D 587849287 587854179 4892 True 9036.000000 9036 100.000000 1 4893 1 chr7D.!!$R1 4892
1 TraesCS7D01G476300 chr7A 679817328 679822141 4813 True 1027.800000 1997 85.797400 193 4849 5 chr7A.!!$R1 4656
2 TraesCS7D01G476300 chr7B 659651711 659655773 4062 True 1430.333333 1555 86.874333 746 4849 3 chr7B.!!$R2 4103
3 TraesCS7D01G476300 chr2B 124150746 124151798 1052 False 1205.000000 1205 88.015000 1320 2338 1 chr2B.!!$F1 1018
4 TraesCS7D01G476300 chr5B 16394820 16395475 655 True 856.000000 856 90.433000 1684 2338 1 chr5B.!!$R1 654

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
247 248 0.024619 GTTTCGCTACGCCGTTGATC 59.975 55.000 2.16 0.00 0.0 2.92 F
249 250 0.108992 TTCGCTACGCCGTTGATCTT 60.109 50.000 2.16 0.00 0.0 2.40 F
357 363 0.110486 ATGGGCTTTCTTGACGGTGT 59.890 50.000 0.00 0.00 0.0 4.16 F
421 427 0.179215 GTTTCTTGCGCTGATGGTCG 60.179 55.000 9.73 0.00 0.0 4.79 F
438 449 0.250793 TCGCGGGTATCATGTTGGTT 59.749 50.000 6.13 0.00 0.0 3.67 F
1459 1927 0.803768 AGATGCGTGTCAGTCGATGC 60.804 55.000 0.00 0.00 0.0 3.91 F
3186 3738 1.902508 TCATCACCTTCGGAAGCTTCT 59.097 47.619 25.05 1.91 0.0 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1179 1576 0.108138 CCACTAACCAGAGGCCGAAG 60.108 60.000 0.00 0.0 0.00 3.79 R
1227 1633 1.153628 GGCGTCGTGCTACTGGATT 60.154 57.895 0.00 0.0 45.43 3.01 R
1799 2309 1.460743 CACTCATTGTACACGCCACTG 59.539 52.381 0.00 0.0 0.00 3.66 R
2223 2750 1.876156 GGAATTGGACATCTGATCGCC 59.124 52.381 0.00 0.0 0.00 5.54 R
2340 2867 5.522315 TCAAGACCATGGTGGGTTTATAA 57.478 39.130 25.52 0.0 43.37 0.98 R
3426 3983 0.482446 AACAGCCAATGGGTTCCAGA 59.518 50.000 0.00 0.0 36.75 3.86 R
4464 5076 0.033781 TGCAGGCCATCTTTTTGCAC 59.966 50.000 5.01 0.0 39.61 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 9.490379 AACGCTCTTATATTAGTTTATGAAGGG 57.510 33.333 0.00 0.00 0.00 3.95
49 50 8.867097 ACGCTCTTATATTAGTTTATGAAGGGA 58.133 33.333 0.00 0.00 0.00 4.20
50 51 9.360093 CGCTCTTATATTAGTTTATGAAGGGAG 57.640 37.037 0.00 0.00 0.00 4.30
100 101 2.271944 AAAAAGCGAGTTAGGCCACT 57.728 45.000 5.01 0.00 0.00 4.00
101 102 3.412237 AAAAAGCGAGTTAGGCCACTA 57.588 42.857 5.01 0.00 0.00 2.74
102 103 3.412237 AAAAGCGAGTTAGGCCACTAA 57.588 42.857 5.01 0.00 36.86 2.24
103 104 3.629142 AAAGCGAGTTAGGCCACTAAT 57.371 42.857 5.01 0.00 41.00 1.73
104 105 4.748277 AAAGCGAGTTAGGCCACTAATA 57.252 40.909 5.01 0.00 41.00 0.98
105 106 4.748277 AAGCGAGTTAGGCCACTAATAA 57.252 40.909 5.01 0.00 41.00 1.40
106 107 4.748277 AGCGAGTTAGGCCACTAATAAA 57.252 40.909 5.01 0.00 41.00 1.40
107 108 5.291905 AGCGAGTTAGGCCACTAATAAAT 57.708 39.130 5.01 0.00 41.00 1.40
108 109 5.298347 AGCGAGTTAGGCCACTAATAAATC 58.702 41.667 5.01 2.06 41.00 2.17
109 110 5.054477 GCGAGTTAGGCCACTAATAAATCA 58.946 41.667 5.01 0.00 41.00 2.57
110 111 5.526111 GCGAGTTAGGCCACTAATAAATCAA 59.474 40.000 5.01 0.00 41.00 2.57
111 112 6.037830 GCGAGTTAGGCCACTAATAAATCAAA 59.962 38.462 5.01 0.00 41.00 2.69
112 113 7.414762 GCGAGTTAGGCCACTAATAAATCAAAA 60.415 37.037 5.01 0.00 41.00 2.44
113 114 8.455682 CGAGTTAGGCCACTAATAAATCAAAAA 58.544 33.333 5.01 0.00 41.00 1.94
114 115 9.788960 GAGTTAGGCCACTAATAAATCAAAAAG 57.211 33.333 5.01 0.00 41.00 2.27
115 116 8.749354 AGTTAGGCCACTAATAAATCAAAAAGG 58.251 33.333 5.01 0.00 41.00 3.11
116 117 8.745590 GTTAGGCCACTAATAAATCAAAAAGGA 58.254 33.333 5.01 0.00 41.00 3.36
117 118 7.410120 AGGCCACTAATAAATCAAAAAGGAG 57.590 36.000 5.01 0.00 0.00 3.69
118 119 6.381133 AGGCCACTAATAAATCAAAAAGGAGG 59.619 38.462 5.01 0.00 0.00 4.30
119 120 6.406961 GGCCACTAATAAATCAAAAAGGAGGG 60.407 42.308 0.00 0.00 0.00 4.30
120 121 6.379988 GCCACTAATAAATCAAAAAGGAGGGA 59.620 38.462 0.00 0.00 0.00 4.20
121 122 7.416777 GCCACTAATAAATCAAAAAGGAGGGAG 60.417 40.741 0.00 0.00 0.00 4.30
122 123 7.615757 CCACTAATAAATCAAAAAGGAGGGAGT 59.384 37.037 0.00 0.00 0.00 3.85
123 124 9.681062 CACTAATAAATCAAAAAGGAGGGAGTA 57.319 33.333 0.00 0.00 0.00 2.59
124 125 9.682465 ACTAATAAATCAAAAAGGAGGGAGTAC 57.318 33.333 0.00 0.00 0.00 2.73
125 126 9.681062 CTAATAAATCAAAAAGGAGGGAGTACA 57.319 33.333 0.00 0.00 0.00 2.90
126 127 8.950007 AATAAATCAAAAAGGAGGGAGTACAA 57.050 30.769 0.00 0.00 0.00 2.41
127 128 6.650427 AAATCAAAAAGGAGGGAGTACAAC 57.350 37.500 0.00 0.00 0.00 3.32
128 129 4.781775 TCAAAAAGGAGGGAGTACAACA 57.218 40.909 0.00 0.00 0.00 3.33
129 130 5.319043 TCAAAAAGGAGGGAGTACAACAT 57.681 39.130 0.00 0.00 0.00 2.71
130 131 6.442541 TCAAAAAGGAGGGAGTACAACATA 57.557 37.500 0.00 0.00 0.00 2.29
131 132 7.027874 TCAAAAAGGAGGGAGTACAACATAT 57.972 36.000 0.00 0.00 0.00 1.78
132 133 7.466804 TCAAAAAGGAGGGAGTACAACATATT 58.533 34.615 0.00 0.00 0.00 1.28
133 134 8.607713 TCAAAAAGGAGGGAGTACAACATATTA 58.392 33.333 0.00 0.00 0.00 0.98
134 135 9.238368 CAAAAAGGAGGGAGTACAACATATTAA 57.762 33.333 0.00 0.00 0.00 1.40
135 136 9.462606 AAAAAGGAGGGAGTACAACATATTAAG 57.537 33.333 0.00 0.00 0.00 1.85
136 137 7.989947 AAGGAGGGAGTACAACATATTAAGA 57.010 36.000 0.00 0.00 0.00 2.10
137 138 8.568617 AAGGAGGGAGTACAACATATTAAGAT 57.431 34.615 0.00 0.00 0.00 2.40
138 139 9.670442 AAGGAGGGAGTACAACATATTAAGATA 57.330 33.333 0.00 0.00 0.00 1.98
139 140 9.845214 AGGAGGGAGTACAACATATTAAGATAT 57.155 33.333 0.00 0.00 0.00 1.63
167 168 9.793259 ATTAGTCAAAACAAAGACCTAATCTGA 57.207 29.630 0.00 0.00 37.88 3.27
168 169 7.736447 AGTCAAAACAAAGACCTAATCTGAG 57.264 36.000 0.00 0.00 37.88 3.35
169 170 6.712547 AGTCAAAACAAAGACCTAATCTGAGG 59.287 38.462 0.00 0.00 42.89 3.86
170 171 6.003950 TCAAAACAAAGACCTAATCTGAGGG 58.996 40.000 0.00 0.00 41.36 4.30
171 172 5.843019 AAACAAAGACCTAATCTGAGGGA 57.157 39.130 0.00 0.00 41.36 4.20
172 173 5.428184 AACAAAGACCTAATCTGAGGGAG 57.572 43.478 0.00 0.00 41.36 4.30
173 174 4.430441 ACAAAGACCTAATCTGAGGGAGT 58.570 43.478 0.00 0.00 41.36 3.85
174 175 5.590818 ACAAAGACCTAATCTGAGGGAGTA 58.409 41.667 0.00 0.00 41.36 2.59
175 176 5.659079 ACAAAGACCTAATCTGAGGGAGTAG 59.341 44.000 0.00 0.00 41.36 2.57
176 177 5.475398 AAGACCTAATCTGAGGGAGTAGT 57.525 43.478 0.00 0.00 39.97 2.73
177 178 6.593759 AAGACCTAATCTGAGGGAGTAGTA 57.406 41.667 0.00 0.00 39.97 1.82
178 179 6.593759 AGACCTAATCTGAGGGAGTAGTAA 57.406 41.667 0.00 0.00 39.97 2.24
179 180 6.607019 AGACCTAATCTGAGGGAGTAGTAAG 58.393 44.000 0.00 0.00 39.97 2.34
180 181 6.390461 AGACCTAATCTGAGGGAGTAGTAAGA 59.610 42.308 0.00 0.00 39.97 2.10
181 182 6.982899 ACCTAATCTGAGGGAGTAGTAAGAA 58.017 40.000 0.00 0.00 39.97 2.52
182 183 7.597327 ACCTAATCTGAGGGAGTAGTAAGAAT 58.403 38.462 0.00 0.00 39.97 2.40
183 184 8.068733 ACCTAATCTGAGGGAGTAGTAAGAATT 58.931 37.037 0.00 0.00 39.97 2.17
184 185 8.581578 CCTAATCTGAGGGAGTAGTAAGAATTC 58.418 40.741 0.00 0.00 39.97 2.17
185 186 6.987403 ATCTGAGGGAGTAGTAAGAATTCC 57.013 41.667 0.65 0.00 0.00 3.01
186 187 5.838955 TCTGAGGGAGTAGTAAGAATTCCA 58.161 41.667 0.65 0.00 0.00 3.53
187 188 5.894393 TCTGAGGGAGTAGTAAGAATTCCAG 59.106 44.000 0.65 0.00 0.00 3.86
188 189 5.590818 TGAGGGAGTAGTAAGAATTCCAGT 58.409 41.667 0.65 0.00 0.00 4.00
189 190 5.422331 TGAGGGAGTAGTAAGAATTCCAGTG 59.578 44.000 0.65 0.00 0.00 3.66
190 191 4.717280 AGGGAGTAGTAAGAATTCCAGTGG 59.283 45.833 1.40 1.40 0.00 4.00
191 192 4.715297 GGGAGTAGTAAGAATTCCAGTGGA 59.285 45.833 8.12 8.12 0.00 4.02
192 193 5.189145 GGGAGTAGTAAGAATTCCAGTGGAA 59.811 44.000 26.54 26.54 46.39 3.53
211 212 8.879759 CAGTGGAATAGTACGTTGTGATTAAAT 58.120 33.333 0.00 0.00 0.00 1.40
212 213 9.095065 AGTGGAATAGTACGTTGTGATTAAATC 57.905 33.333 0.00 0.00 0.00 2.17
226 227 7.394016 TGTGATTAAATCTAGAAGGTTGAGCA 58.606 34.615 0.00 0.00 0.00 4.26
227 228 8.049117 TGTGATTAAATCTAGAAGGTTGAGCAT 58.951 33.333 0.00 0.00 0.00 3.79
228 229 8.341173 GTGATTAAATCTAGAAGGTTGAGCATG 58.659 37.037 0.00 0.00 0.00 4.06
229 230 8.049117 TGATTAAATCTAGAAGGTTGAGCATGT 58.951 33.333 0.00 0.00 0.00 3.21
233 234 4.245660 TCTAGAAGGTTGAGCATGTTTCG 58.754 43.478 0.00 0.00 0.00 3.46
234 235 1.537202 AGAAGGTTGAGCATGTTTCGC 59.463 47.619 0.00 0.00 0.00 4.70
236 237 2.472695 AGGTTGAGCATGTTTCGCTA 57.527 45.000 0.00 0.00 40.63 4.26
239 240 0.442310 TTGAGCATGTTTCGCTACGC 59.558 50.000 0.00 0.00 40.63 4.42
240 241 1.348594 GAGCATGTTTCGCTACGCC 59.651 57.895 0.00 0.00 40.63 5.68
245 246 0.668096 ATGTTTCGCTACGCCGTTGA 60.668 50.000 2.16 0.00 0.00 3.18
247 248 0.024619 GTTTCGCTACGCCGTTGATC 59.975 55.000 2.16 0.00 0.00 2.92
249 250 0.108992 TTCGCTACGCCGTTGATCTT 60.109 50.000 2.16 0.00 0.00 2.40
252 253 0.645868 GCTACGCCGTTGATCTTGTC 59.354 55.000 2.16 0.00 0.00 3.18
253 254 0.914551 CTACGCCGTTGATCTTGTCG 59.085 55.000 0.00 0.00 0.00 4.35
266 267 7.467267 CGTTGATCTTGTCGGGATTTCATAATT 60.467 37.037 0.00 0.00 0.00 1.40
277 278 8.768955 TCGGGATTTCATAATTTTTGTTTGTTG 58.231 29.630 0.00 0.00 0.00 3.33
289 291 4.974103 TTGTTTGTTGTTTGGTTTCACG 57.026 36.364 0.00 0.00 0.00 4.35
290 292 3.978687 TGTTTGTTGTTTGGTTTCACGT 58.021 36.364 0.00 0.00 0.00 4.49
297 299 1.668101 TTTGGTTTCACGTGTGGGGC 61.668 55.000 16.51 2.89 0.00 5.80
304 306 3.249189 ACGTGTGGGGCAGATGGT 61.249 61.111 0.00 0.00 0.00 3.55
307 309 1.613317 CGTGTGGGGCAGATGGTCTA 61.613 60.000 0.00 0.00 0.00 2.59
313 315 1.475751 GGGGCAGATGGTCTATGTGTG 60.476 57.143 0.00 0.00 32.84 3.82
315 317 2.283298 GGCAGATGGTCTATGTGTGTG 58.717 52.381 0.00 0.00 32.84 3.82
317 319 2.932614 GCAGATGGTCTATGTGTGTGTC 59.067 50.000 0.00 0.00 32.84 3.67
318 320 3.617288 GCAGATGGTCTATGTGTGTGTCA 60.617 47.826 0.00 0.00 32.84 3.58
320 322 5.181009 CAGATGGTCTATGTGTGTGTCATT 58.819 41.667 0.00 0.00 0.00 2.57
322 324 6.818142 CAGATGGTCTATGTGTGTGTCATTTA 59.182 38.462 0.00 0.00 0.00 1.40
327 333 9.108284 TGGTCTATGTGTGTGTCATTTATAATG 57.892 33.333 0.00 0.00 0.00 1.90
328 334 8.070171 GGTCTATGTGTGTGTCATTTATAATGC 58.930 37.037 0.00 0.00 0.00 3.56
329 335 7.793888 GTCTATGTGTGTGTCATTTATAATGCG 59.206 37.037 0.00 0.00 0.00 4.73
335 341 6.371825 TGTGTGTCATTTATAATGCGGTGTTA 59.628 34.615 0.00 0.00 0.00 2.41
338 344 7.281100 TGTGTCATTTATAATGCGGTGTTATGA 59.719 33.333 0.00 0.00 0.00 2.15
342 348 6.567687 TTTATAATGCGGTGTTATGATGGG 57.432 37.500 0.00 0.00 0.00 4.00
347 353 1.065551 GCGGTGTTATGATGGGCTTTC 59.934 52.381 0.00 0.00 0.00 2.62
352 358 4.142381 GGTGTTATGATGGGCTTTCTTGAC 60.142 45.833 0.00 0.00 0.00 3.18
353 359 3.689161 TGTTATGATGGGCTTTCTTGACG 59.311 43.478 0.00 0.00 0.00 4.35
357 363 0.110486 ATGGGCTTTCTTGACGGTGT 59.890 50.000 0.00 0.00 0.00 4.16
362 368 2.293399 GGCTTTCTTGACGGTGTGATTT 59.707 45.455 0.00 0.00 0.00 2.17
363 369 3.555518 GCTTTCTTGACGGTGTGATTTC 58.444 45.455 0.00 0.00 0.00 2.17
365 371 4.451096 GCTTTCTTGACGGTGTGATTTCTA 59.549 41.667 0.00 0.00 0.00 2.10
366 372 5.122396 GCTTTCTTGACGGTGTGATTTCTAT 59.878 40.000 0.00 0.00 0.00 1.98
369 375 5.547465 TCTTGACGGTGTGATTTCTATGTT 58.453 37.500 0.00 0.00 0.00 2.71
370 376 6.693466 TCTTGACGGTGTGATTTCTATGTTA 58.307 36.000 0.00 0.00 0.00 2.41
373 379 6.873997 TGACGGTGTGATTTCTATGTTATCT 58.126 36.000 0.00 0.00 0.00 1.98
374 380 6.756542 TGACGGTGTGATTTCTATGTTATCTG 59.243 38.462 0.00 0.00 0.00 2.90
376 382 5.755375 CGGTGTGATTTCTATGTTATCTGCT 59.245 40.000 0.00 0.00 0.00 4.24
399 405 6.420008 GCTAACCAACTCATACTTATACGTGG 59.580 42.308 0.00 0.00 0.00 4.94
401 407 6.726490 ACCAACTCATACTTATACGTGGAT 57.274 37.500 0.00 0.00 0.00 3.41
404 410 6.984474 CCAACTCATACTTATACGTGGATGTT 59.016 38.462 0.00 0.00 0.00 2.71
411 417 4.328983 ACTTATACGTGGATGTTTCTTGCG 59.671 41.667 0.00 0.00 0.00 4.85
415 421 0.874390 GTGGATGTTTCTTGCGCTGA 59.126 50.000 9.73 3.98 0.00 4.26
416 422 1.470098 GTGGATGTTTCTTGCGCTGAT 59.530 47.619 9.73 0.00 0.00 2.90
417 423 1.469703 TGGATGTTTCTTGCGCTGATG 59.530 47.619 9.73 0.00 0.00 3.07
418 424 1.202222 GGATGTTTCTTGCGCTGATGG 60.202 52.381 9.73 0.00 0.00 3.51
419 425 1.470098 GATGTTTCTTGCGCTGATGGT 59.530 47.619 9.73 0.00 0.00 3.55
420 426 0.874390 TGTTTCTTGCGCTGATGGTC 59.126 50.000 9.73 0.00 0.00 4.02
421 427 0.179215 GTTTCTTGCGCTGATGGTCG 60.179 55.000 9.73 0.00 0.00 4.79
430 441 1.739667 CTGATGGTCGCGGGTATCA 59.260 57.895 6.13 12.51 0.00 2.15
438 449 0.250793 TCGCGGGTATCATGTTGGTT 59.749 50.000 6.13 0.00 0.00 3.67
466 479 5.588648 CGGTGTCATATATTGGTGTTCCTTT 59.411 40.000 0.00 0.00 34.23 3.11
489 502 1.068895 TCTCTAGGTAGCGAGAGGACG 59.931 57.143 25.58 7.30 39.79 4.79
492 505 1.094073 TAGGTAGCGAGAGGACGTGC 61.094 60.000 0.00 0.00 35.59 5.34
498 511 3.063084 GAGAGGACGTGCGGGACT 61.063 66.667 0.00 0.03 0.00 3.85
501 514 3.222354 GAGGACGTGCGGGACTGTT 62.222 63.158 0.00 0.00 0.00 3.16
502 515 3.041940 GGACGTGCGGGACTGTTG 61.042 66.667 0.00 0.00 0.00 3.33
503 516 2.028484 GACGTGCGGGACTGTTGA 59.972 61.111 0.00 0.00 0.00 3.18
504 517 2.022129 GACGTGCGGGACTGTTGAG 61.022 63.158 0.00 0.00 0.00 3.02
508 521 1.021968 GTGCGGGACTGTTGAGTTTT 58.978 50.000 0.00 0.00 30.16 2.43
509 522 1.404035 GTGCGGGACTGTTGAGTTTTT 59.596 47.619 0.00 0.00 30.16 1.94
510 523 2.614983 GTGCGGGACTGTTGAGTTTTTA 59.385 45.455 0.00 0.00 30.16 1.52
511 524 2.875933 TGCGGGACTGTTGAGTTTTTAG 59.124 45.455 0.00 0.00 30.16 1.85
512 525 2.225727 GCGGGACTGTTGAGTTTTTAGG 59.774 50.000 0.00 0.00 30.16 2.69
513 526 3.473625 CGGGACTGTTGAGTTTTTAGGT 58.526 45.455 0.00 0.00 30.16 3.08
514 527 3.881089 CGGGACTGTTGAGTTTTTAGGTT 59.119 43.478 0.00 0.00 30.16 3.50
516 529 5.588240 GGGACTGTTGAGTTTTTAGGTTTG 58.412 41.667 0.00 0.00 30.16 2.93
519 532 6.203808 ACTGTTGAGTTTTTAGGTTTGGTC 57.796 37.500 0.00 0.00 0.00 4.02
520 533 5.949952 ACTGTTGAGTTTTTAGGTTTGGTCT 59.050 36.000 0.00 0.00 0.00 3.85
525 558 6.859017 TGAGTTTTTAGGTTTGGTCTTTGAC 58.141 36.000 0.00 0.00 0.00 3.18
539 572 3.769300 GTCTTTGACCCAGCCCAAATTAT 59.231 43.478 0.00 0.00 32.60 1.28
542 575 3.464720 TGACCCAGCCCAAATTATGAA 57.535 42.857 0.00 0.00 0.00 2.57
553 586 7.063780 CAGCCCAAATTATGAATCAAACTCAAC 59.936 37.037 0.00 0.00 0.00 3.18
567 600 7.589958 TCAAACTCAACATTAAAGGCCTTAA 57.410 32.000 20.84 13.58 34.00 1.85
583 616 9.625747 AAAGGCCTTAAAATTGATTCTTGAAAA 57.374 25.926 20.84 0.00 0.00 2.29
593 626 3.316868 TGATTCTTGAAAACCGTTGACCC 59.683 43.478 0.00 0.00 0.00 4.46
594 627 1.301423 TCTTGAAAACCGTTGACCCG 58.699 50.000 0.00 0.00 0.00 5.28
605 638 1.604755 CGTTGACCCGGTTTGAATCAA 59.395 47.619 0.00 0.00 0.00 2.57
606 639 2.033550 CGTTGACCCGGTTTGAATCAAA 59.966 45.455 4.03 4.03 31.45 2.69
630 663 8.518430 AAAAGCAAATCCAAAATTAAACACCT 57.482 26.923 0.00 0.00 0.00 4.00
631 664 7.728847 AAGCAAATCCAAAATTAAACACCTC 57.271 32.000 0.00 0.00 0.00 3.85
632 665 6.825610 AGCAAATCCAAAATTAAACACCTCA 58.174 32.000 0.00 0.00 0.00 3.86
633 666 7.278875 AGCAAATCCAAAATTAAACACCTCAA 58.721 30.769 0.00 0.00 0.00 3.02
634 667 7.938490 AGCAAATCCAAAATTAAACACCTCAAT 59.062 29.630 0.00 0.00 0.00 2.57
635 668 8.567104 GCAAATCCAAAATTAAACACCTCAATT 58.433 29.630 0.00 0.00 0.00 2.32
651 684 9.965824 ACACCTCAATTAAATTAAACACAAGAG 57.034 29.630 0.00 0.00 0.00 2.85
652 685 8.915654 CACCTCAATTAAATTAAACACAAGAGC 58.084 33.333 0.00 0.00 0.00 4.09
653 686 8.860088 ACCTCAATTAAATTAAACACAAGAGCT 58.140 29.630 0.00 0.00 0.00 4.09
654 687 9.696917 CCTCAATTAAATTAAACACAAGAGCTT 57.303 29.630 0.00 0.00 0.00 3.74
656 689 9.393249 TCAATTAAATTAAACACAAGAGCTTCG 57.607 29.630 0.00 0.00 0.00 3.79
657 690 9.393249 CAATTAAATTAAACACAAGAGCTTCGA 57.607 29.630 0.00 0.00 0.00 3.71
658 691 9.959749 AATTAAATTAAACACAAGAGCTTCGAA 57.040 25.926 0.00 0.00 0.00 3.71
659 692 9.959749 ATTAAATTAAACACAAGAGCTTCGAAA 57.040 25.926 0.00 0.00 0.00 3.46
660 693 9.959749 TTAAATTAAACACAAGAGCTTCGAAAT 57.040 25.926 0.00 0.00 0.00 2.17
661 694 8.871686 AAATTAAACACAAGAGCTTCGAAATT 57.128 26.923 0.00 0.00 0.00 1.82
662 695 9.959749 AAATTAAACACAAGAGCTTCGAAATTA 57.040 25.926 0.00 0.00 0.00 1.40
663 696 9.959749 AATTAAACACAAGAGCTTCGAAATTAA 57.040 25.926 0.00 0.00 0.00 1.40
664 697 9.959749 ATTAAACACAAGAGCTTCGAAATTAAA 57.040 25.926 0.00 0.00 0.00 1.52
665 698 7.914537 AAACACAAGAGCTTCGAAATTAAAG 57.085 32.000 0.00 0.00 0.00 1.85
705 1056 4.811969 TCCTTCTTCCTTGCACGTATAA 57.188 40.909 0.00 0.00 0.00 0.98
706 1057 5.353394 TCCTTCTTCCTTGCACGTATAAT 57.647 39.130 0.00 0.00 0.00 1.28
707 1058 6.474140 TCCTTCTTCCTTGCACGTATAATA 57.526 37.500 0.00 0.00 0.00 0.98
708 1059 7.062749 TCCTTCTTCCTTGCACGTATAATAT 57.937 36.000 0.00 0.00 0.00 1.28
709 1060 7.152645 TCCTTCTTCCTTGCACGTATAATATC 58.847 38.462 0.00 0.00 0.00 1.63
710 1061 6.929049 CCTTCTTCCTTGCACGTATAATATCA 59.071 38.462 0.00 0.00 0.00 2.15
711 1062 7.095607 CCTTCTTCCTTGCACGTATAATATCAC 60.096 40.741 0.00 0.00 0.00 3.06
712 1063 6.220930 TCTTCCTTGCACGTATAATATCACC 58.779 40.000 0.00 0.00 0.00 4.02
713 1064 5.538849 TCCTTGCACGTATAATATCACCA 57.461 39.130 0.00 0.00 0.00 4.17
717 1068 8.318412 TCCTTGCACGTATAATATCACCATATT 58.682 33.333 0.00 0.00 38.52 1.28
732 1083 6.770542 TCACCATATTAGTACCACACACAAA 58.229 36.000 0.00 0.00 0.00 2.83
736 1087 4.986054 ATTAGTACCACACACAAAGGGA 57.014 40.909 0.00 0.00 0.00 4.20
974 1345 1.348036 GGCCAGATAAATACCTCGGCT 59.652 52.381 0.00 0.00 38.16 5.52
1173 1570 3.452786 CTCGCGCCTCCTTCTCCA 61.453 66.667 0.00 0.00 0.00 3.86
1179 1576 0.813210 CGCCTCCTTCTCCATCTTGC 60.813 60.000 0.00 0.00 0.00 4.01
1182 1579 2.916640 CCTCCTTCTCCATCTTGCTTC 58.083 52.381 0.00 0.00 0.00 3.86
1183 1580 2.548875 CTCCTTCTCCATCTTGCTTCG 58.451 52.381 0.00 0.00 0.00 3.79
1196 1602 1.192146 TGCTTCGGCCTCTGGTTAGT 61.192 55.000 0.00 0.00 40.91 2.24
1236 1642 3.100545 ATTGCGCCCAATCCAGTAG 57.899 52.632 4.18 0.00 37.04 2.57
1237 1643 1.103398 ATTGCGCCCAATCCAGTAGC 61.103 55.000 4.18 0.00 37.04 3.58
1238 1644 2.124736 GCGCCCAATCCAGTAGCA 60.125 61.111 0.00 0.00 0.00 3.49
1239 1645 2.472909 GCGCCCAATCCAGTAGCAC 61.473 63.158 0.00 0.00 0.00 4.40
1240 1646 2.173669 CGCCCAATCCAGTAGCACG 61.174 63.158 0.00 0.00 0.00 5.34
1241 1647 1.220749 GCCCAATCCAGTAGCACGA 59.779 57.895 0.00 0.00 0.00 4.35
1242 1648 1.090052 GCCCAATCCAGTAGCACGAC 61.090 60.000 0.00 0.00 0.00 4.34
1243 1649 0.806102 CCCAATCCAGTAGCACGACG 60.806 60.000 0.00 0.00 0.00 5.12
1244 1650 1.421410 CCAATCCAGTAGCACGACGC 61.421 60.000 0.00 0.00 42.91 5.19
1245 1651 1.153628 AATCCAGTAGCACGACGCC 60.154 57.895 0.00 0.00 44.04 5.68
1246 1652 2.884087 AATCCAGTAGCACGACGCCG 62.884 60.000 0.00 0.00 44.04 6.46
1248 1654 4.778415 CAGTAGCACGACGCCGCT 62.778 66.667 15.64 15.64 44.04 5.52
1249 1655 4.052229 AGTAGCACGACGCCGCTT 62.052 61.111 16.41 0.00 44.04 4.68
1250 1656 3.542742 GTAGCACGACGCCGCTTC 61.543 66.667 16.41 8.84 44.04 3.86
1251 1657 4.789075 TAGCACGACGCCGCTTCC 62.789 66.667 16.41 0.00 44.04 3.46
1261 1667 2.436115 CCGCTTCCGTTCCCTTCC 60.436 66.667 0.00 0.00 0.00 3.46
1305 1711 2.180769 CCGCCGTCGTGAGATTGA 59.819 61.111 0.00 0.00 45.19 2.57
1448 1916 1.806542 AGGTGTTTGCTAAGATGCGTG 59.193 47.619 0.00 0.00 35.36 5.34
1459 1927 0.803768 AGATGCGTGTCAGTCGATGC 60.804 55.000 0.00 0.00 0.00 3.91
1513 1984 6.961554 GGTTGAATTTTACGATTCTGTAGCAG 59.038 38.462 0.00 0.00 37.04 4.24
1514 1985 6.106877 TGAATTTTACGATTCTGTAGCAGC 57.893 37.500 0.00 0.00 37.04 5.25
1515 1986 5.641636 TGAATTTTACGATTCTGTAGCAGCA 59.358 36.000 0.00 0.00 37.04 4.41
1519 1990 2.977914 ACGATTCTGTAGCAGCATGTT 58.022 42.857 0.00 0.00 39.31 2.71
1604 2097 8.414778 ACTAAGTGTAGTTATGCAGAATACCTC 58.585 37.037 0.00 0.00 37.25 3.85
1678 2174 7.392673 ACTGAGGCAGGATTAATTATTATGCTG 59.607 37.037 12.09 12.09 35.51 4.41
1729 2230 8.109705 TGAAGCAGAACTAATTCTTAAATGCA 57.890 30.769 0.00 0.00 42.91 3.96
1779 2289 8.409371 TGTGTACAACATGCTCAAAGAATTTTA 58.591 29.630 0.00 0.00 31.36 1.52
1780 2290 9.243637 GTGTACAACATGCTCAAAGAATTTTAA 57.756 29.630 0.00 0.00 35.03 1.52
1781 2291 9.979578 TGTACAACATGCTCAAAGAATTTTAAT 57.020 25.926 0.00 0.00 35.03 1.40
1980 2500 5.010012 GCATCTTCCTTCCTTTTTCTGACAA 59.990 40.000 0.00 0.00 0.00 3.18
2030 2550 3.782523 TGAATCCTTCATCAGGTTAGCCT 59.217 43.478 0.00 0.00 44.37 4.58
2157 2684 4.154375 GGAACGATGGAGGAAAAGAAAGAC 59.846 45.833 0.00 0.00 0.00 3.01
2223 2750 2.486472 ACACAGAAAGCAGAGATGGG 57.514 50.000 0.00 0.00 0.00 4.00
2311 2838 4.924305 TTTACTACGGTTCACACTCTGT 57.076 40.909 0.00 0.00 0.00 3.41
2317 2844 3.914312 ACGGTTCACACTCTGTATCTTG 58.086 45.455 0.00 0.00 0.00 3.02
2318 2845 3.321111 ACGGTTCACACTCTGTATCTTGT 59.679 43.478 0.00 0.00 0.00 3.16
2361 2888 7.559897 AGTTATTATAAACCCACCATGGTCTTG 59.440 37.037 16.53 8.88 37.76 3.02
2654 3193 4.159135 TCTTTATTCAGACCGTACAGGGAC 59.841 45.833 8.31 0.00 46.96 4.46
2779 3328 7.807977 TCCAGTCATAGGCTATTTCATTTTC 57.192 36.000 3.76 0.00 0.00 2.29
2979 3531 3.689347 CAATCCCCTTGTCAATGACAGA 58.311 45.455 16.10 10.47 43.69 3.41
3186 3738 1.902508 TCATCACCTTCGGAAGCTTCT 59.097 47.619 25.05 1.91 0.00 2.85
3385 3941 4.136796 GCCATGTTAATCTGTGCTGGATA 58.863 43.478 0.00 0.00 0.00 2.59
3426 3983 5.997385 AGCTGTTTTTCGTCACGATAATTT 58.003 33.333 0.00 0.00 35.23 1.82
3440 4000 4.644685 ACGATAATTTCTGGAACCCATTGG 59.355 41.667 0.00 0.00 30.82 3.16
3447 4007 0.187117 TGGAACCCATTGGCTGTTGA 59.813 50.000 0.00 0.00 33.59 3.18
3449 4009 2.042297 TGGAACCCATTGGCTGTTGATA 59.958 45.455 0.00 0.00 33.59 2.15
3454 4014 4.526970 ACCCATTGGCTGTTGATAAGTAG 58.473 43.478 0.00 0.00 33.59 2.57
3467 4027 5.207110 TGATAAGTAGAGCAAGATCAGGC 57.793 43.478 0.00 0.00 0.00 4.85
3477 4037 3.265479 AGCAAGATCAGGCTCCTTAGTTT 59.735 43.478 5.40 0.00 34.76 2.66
3478 4038 4.013050 GCAAGATCAGGCTCCTTAGTTTT 58.987 43.478 0.00 0.00 0.00 2.43
3479 4039 4.142513 GCAAGATCAGGCTCCTTAGTTTTG 60.143 45.833 0.00 0.00 0.00 2.44
3480 4040 5.248640 CAAGATCAGGCTCCTTAGTTTTGA 58.751 41.667 0.00 0.00 0.00 2.69
3481 4041 5.505181 AGATCAGGCTCCTTAGTTTTGAA 57.495 39.130 0.00 0.00 0.00 2.69
3482 4042 5.880901 AGATCAGGCTCCTTAGTTTTGAAA 58.119 37.500 0.00 0.00 0.00 2.69
3483 4043 5.942826 AGATCAGGCTCCTTAGTTTTGAAAG 59.057 40.000 0.00 0.00 0.00 2.62
3484 4044 5.304686 TCAGGCTCCTTAGTTTTGAAAGA 57.695 39.130 0.00 0.00 0.00 2.52
3485 4045 5.880901 TCAGGCTCCTTAGTTTTGAAAGAT 58.119 37.500 0.00 0.00 0.00 2.40
3486 4046 7.016153 TCAGGCTCCTTAGTTTTGAAAGATA 57.984 36.000 0.00 0.00 0.00 1.98
3487 4047 7.458397 TCAGGCTCCTTAGTTTTGAAAGATAA 58.542 34.615 0.00 0.00 0.00 1.75
3488 4048 7.390718 TCAGGCTCCTTAGTTTTGAAAGATAAC 59.609 37.037 0.00 0.00 0.00 1.89
3489 4049 7.174946 CAGGCTCCTTAGTTTTGAAAGATAACA 59.825 37.037 0.00 0.00 0.00 2.41
3490 4050 7.391833 AGGCTCCTTAGTTTTGAAAGATAACAG 59.608 37.037 0.00 0.00 0.00 3.16
3491 4051 7.362142 GGCTCCTTAGTTTTGAAAGATAACAGG 60.362 40.741 0.00 0.00 0.00 4.00
3492 4052 7.390718 GCTCCTTAGTTTTGAAAGATAACAGGA 59.609 37.037 0.00 0.00 0.00 3.86
3493 4053 8.848474 TCCTTAGTTTTGAAAGATAACAGGAG 57.152 34.615 0.00 0.00 0.00 3.69
3494 4054 8.656806 TCCTTAGTTTTGAAAGATAACAGGAGA 58.343 33.333 0.00 0.00 0.00 3.71
3495 4055 9.454859 CCTTAGTTTTGAAAGATAACAGGAGAT 57.545 33.333 0.00 0.00 0.00 2.75
3499 4059 9.225436 AGTTTTGAAAGATAACAGGAGATCTTC 57.775 33.333 0.00 0.00 40.68 2.87
3500 4060 9.003658 GTTTTGAAAGATAACAGGAGATCTTCA 57.996 33.333 3.21 0.00 40.68 3.02
3501 4061 9.745018 TTTTGAAAGATAACAGGAGATCTTCAT 57.255 29.630 3.21 0.00 40.68 2.57
3502 4062 8.728337 TTGAAAGATAACAGGAGATCTTCATG 57.272 34.615 3.21 4.69 40.68 3.07
3503 4063 7.278135 TGAAAGATAACAGGAGATCTTCATGG 58.722 38.462 3.21 0.00 41.79 3.66
3504 4064 6.821616 AAGATAACAGGAGATCTTCATGGT 57.178 37.500 3.21 3.40 41.79 3.55
3505 4065 6.821616 AGATAACAGGAGATCTTCATGGTT 57.178 37.500 3.21 7.29 41.79 3.67
3506 4066 6.590068 AGATAACAGGAGATCTTCATGGTTG 58.410 40.000 3.21 0.00 41.79 3.77
3507 4067 4.916041 AACAGGAGATCTTCATGGTTGA 57.084 40.909 3.21 0.00 41.79 3.18
3508 4068 4.213564 ACAGGAGATCTTCATGGTTGAC 57.786 45.455 3.21 0.00 41.79 3.18
3509 4069 3.054802 ACAGGAGATCTTCATGGTTGACC 60.055 47.826 3.21 0.00 41.79 4.02
3510 4070 3.199508 CAGGAGATCTTCATGGTTGACCT 59.800 47.826 3.21 0.00 34.03 3.85
3511 4071 3.199508 AGGAGATCTTCATGGTTGACCTG 59.800 47.826 3.21 0.00 36.82 4.00
3512 4072 3.198635 GGAGATCTTCATGGTTGACCTGA 59.801 47.826 0.00 0.67 36.82 3.86
3513 4073 4.323792 GGAGATCTTCATGGTTGACCTGAA 60.324 45.833 0.00 7.94 36.82 3.02
3514 4074 5.246981 AGATCTTCATGGTTGACCTGAAA 57.753 39.130 12.72 7.47 34.86 2.69
3515 4075 5.824421 AGATCTTCATGGTTGACCTGAAAT 58.176 37.500 12.72 10.21 34.86 2.17
3516 4076 6.251471 AGATCTTCATGGTTGACCTGAAATT 58.749 36.000 12.72 6.52 34.86 1.82
3517 4077 6.723052 AGATCTTCATGGTTGACCTGAAATTT 59.277 34.615 12.72 0.00 34.86 1.82
3518 4078 6.088016 TCTTCATGGTTGACCTGAAATTTG 57.912 37.500 0.00 0.00 34.86 2.32
3519 4079 4.255833 TCATGGTTGACCTGAAATTTGC 57.744 40.909 0.00 0.00 36.82 3.68
3520 4080 3.006752 TCATGGTTGACCTGAAATTTGCC 59.993 43.478 0.00 0.00 36.82 4.52
3521 4081 2.392662 TGGTTGACCTGAAATTTGCCA 58.607 42.857 0.00 0.00 36.82 4.92
3522 4082 2.971330 TGGTTGACCTGAAATTTGCCAT 59.029 40.909 0.00 0.00 36.82 4.40
3523 4083 4.155709 TGGTTGACCTGAAATTTGCCATA 58.844 39.130 0.00 0.00 36.82 2.74
3524 4084 4.776837 TGGTTGACCTGAAATTTGCCATAT 59.223 37.500 0.00 0.00 36.82 1.78
3525 4085 5.954752 TGGTTGACCTGAAATTTGCCATATA 59.045 36.000 0.00 0.00 36.82 0.86
3526 4086 6.127479 TGGTTGACCTGAAATTTGCCATATAC 60.127 38.462 0.00 0.00 36.82 1.47
3527 4087 6.096846 GGTTGACCTGAAATTTGCCATATACT 59.903 38.462 0.00 0.00 0.00 2.12
3528 4088 6.942532 TGACCTGAAATTTGCCATATACTC 57.057 37.500 0.00 0.00 0.00 2.59
3529 4089 5.827797 TGACCTGAAATTTGCCATATACTCC 59.172 40.000 0.00 0.00 0.00 3.85
3568 4128 7.882791 TCACCTTGTCACTGATACATACATTTT 59.117 33.333 0.00 0.00 0.00 1.82
3571 4131 8.612619 CCTTGTCACTGATACATACATTTTACC 58.387 37.037 0.00 0.00 0.00 2.85
3572 4132 9.161629 CTTGTCACTGATACATACATTTTACCA 57.838 33.333 0.00 0.00 0.00 3.25
3663 4223 6.412362 ACTGACTCTTCATCCATGGTATAC 57.588 41.667 12.58 0.00 0.00 1.47
3748 4308 6.453092 CCTGTTGAATTGCTGATCTTTTCTT 58.547 36.000 0.00 0.00 0.00 2.52
3832 4392 2.616510 CCTCCTTTCCTTTGCGAGTGAT 60.617 50.000 0.00 0.00 0.00 3.06
3877 4437 3.614870 CGACATATTCGCCATCAGGATCA 60.615 47.826 0.00 0.00 41.87 2.92
3935 4495 5.352569 GGTCAGGTTGTTGAAGATATGAGTG 59.647 44.000 0.00 0.00 0.00 3.51
3970 4531 5.995897 CCATGCTCTGACATCATCATCTTAA 59.004 40.000 0.00 0.00 36.48 1.85
3972 4533 5.055144 TGCTCTGACATCATCATCTTAAGC 58.945 41.667 0.00 0.00 36.48 3.09
4023 4590 6.445357 AAACCTAGTATAATTTTGCGGTGG 57.555 37.500 0.00 0.00 0.00 4.61
4115 4683 9.612620 GAAGTTCATCTGGTAAAAACAAGTATG 57.387 33.333 0.00 0.00 0.00 2.39
4245 4834 3.266510 TGAATGTGTACATGAGCTCCC 57.733 47.619 12.15 0.00 36.56 4.30
4265 4877 8.919145 AGCTCCCAATTATATGCTATCTAGTAC 58.081 37.037 0.00 0.00 0.00 2.73
4266 4878 8.919145 GCTCCCAATTATATGCTATCTAGTACT 58.081 37.037 0.00 0.00 0.00 2.73
4268 4880 9.769677 TCCCAATTATATGCTATCTAGTACTGT 57.230 33.333 5.39 0.00 0.00 3.55
4338 4950 7.230849 TCCATATGTCCAATTGCCATAATTC 57.769 36.000 15.67 0.00 0.00 2.17
4344 4956 3.044986 CCAATTGCCATAATTCGAAGCG 58.955 45.455 3.35 0.00 0.00 4.68
4460 5072 6.762661 TGCATAGAAGATCATTGAACGATTGA 59.237 34.615 0.00 0.00 0.00 2.57
4464 5076 7.012959 AGAAGATCATTGAACGATTGACATG 57.987 36.000 0.00 0.00 0.00 3.21
4490 5102 3.508744 AAAGATGGCCTGCATTAAACG 57.491 42.857 3.32 0.00 0.00 3.60
4510 5122 2.109538 CTAATGCGCGGTCATGCTGG 62.110 60.000 8.83 0.00 0.00 4.85
4525 5140 1.136891 TGCTGGTGATCAGTATGTCGG 59.863 52.381 0.00 0.00 45.08 4.79
4528 5143 3.678806 GCTGGTGATCAGTATGTCGGAAA 60.679 47.826 0.00 0.00 45.08 3.13
4566 5181 2.488153 GTTGGACATGAAACCAGTAGCC 59.512 50.000 0.00 0.00 37.48 3.93
4590 5205 0.379669 GCTCCTTCATGTTGGCATCG 59.620 55.000 0.00 0.00 31.99 3.84
4664 5279 0.795085 CAAGCAGCAGAAAGACGGAG 59.205 55.000 0.00 0.00 0.00 4.63
4742 5363 1.003580 GATCTTGGCTCCACTTGGACA 59.996 52.381 0.00 0.00 39.78 4.02
4744 5365 0.179020 CTTGGCTCCACTTGGACACA 60.179 55.000 0.00 0.00 39.78 3.72
4790 5411 6.860080 ACATTCACAAAAGGATTATGCTCTG 58.140 36.000 0.00 0.00 0.00 3.35
4794 5415 5.769662 TCACAAAAGGATTATGCTCTGTTGT 59.230 36.000 5.17 5.17 0.00 3.32
4795 5416 6.939730 TCACAAAAGGATTATGCTCTGTTGTA 59.060 34.615 8.98 0.23 0.00 2.41
4797 5418 6.127897 ACAAAAGGATTATGCTCTGTTGTAGC 60.128 38.462 8.02 0.00 40.50 3.58
4799 5420 3.713764 AGGATTATGCTCTGTTGTAGCCT 59.286 43.478 0.00 0.00 39.30 4.58
4804 5425 1.625315 TGCTCTGTTGTAGCCTGTGAT 59.375 47.619 0.00 0.00 39.30 3.06
4805 5426 2.831526 TGCTCTGTTGTAGCCTGTGATA 59.168 45.455 0.00 0.00 39.30 2.15
4834 5455 5.108517 TGAAGGAAAAACAGTTGTGCATTC 58.891 37.500 2.20 2.20 0.00 2.67
4840 5461 6.091986 GGAAAAACAGTTGTGCATTCTTTTCA 59.908 34.615 14.50 0.00 34.66 2.69
4841 5462 6.407475 AAAACAGTTGTGCATTCTTTTCAC 57.593 33.333 0.00 0.00 0.00 3.18
4843 5464 4.675510 ACAGTTGTGCATTCTTTTCACAG 58.324 39.130 0.00 0.00 41.12 3.66
4849 5470 6.201226 TGTGCATTCTTTTCACAGTAAACA 57.799 33.333 0.00 0.00 35.99 2.83
4850 5471 6.625362 TGTGCATTCTTTTCACAGTAAACAA 58.375 32.000 0.00 0.00 35.99 2.83
4851 5472 6.751425 TGTGCATTCTTTTCACAGTAAACAAG 59.249 34.615 0.00 0.00 35.99 3.16
4852 5473 6.972328 GTGCATTCTTTTCACAGTAAACAAGA 59.028 34.615 0.00 0.00 0.00 3.02
4853 5474 7.487829 GTGCATTCTTTTCACAGTAAACAAGAA 59.512 33.333 0.00 0.00 0.00 2.52
4854 5475 8.031864 TGCATTCTTTTCACAGTAAACAAGAAA 58.968 29.630 0.00 0.00 0.00 2.52
4855 5476 8.534778 GCATTCTTTTCACAGTAAACAAGAAAG 58.465 33.333 0.00 0.00 30.83 2.62
4856 5477 9.023967 CATTCTTTTCACAGTAAACAAGAAAGG 57.976 33.333 0.00 0.00 30.83 3.11
4857 5478 7.696992 TCTTTTCACAGTAAACAAGAAAGGT 57.303 32.000 0.00 0.00 30.83 3.50
4858 5479 8.795842 TCTTTTCACAGTAAACAAGAAAGGTA 57.204 30.769 0.00 0.00 30.83 3.08
4859 5480 8.889717 TCTTTTCACAGTAAACAAGAAAGGTAG 58.110 33.333 0.00 0.00 30.83 3.18
4860 5481 7.562454 TTTCACAGTAAACAAGAAAGGTAGG 57.438 36.000 0.00 0.00 0.00 3.18
4861 5482 6.488769 TCACAGTAAACAAGAAAGGTAGGA 57.511 37.500 0.00 0.00 0.00 2.94
4862 5483 6.522054 TCACAGTAAACAAGAAAGGTAGGAG 58.478 40.000 0.00 0.00 0.00 3.69
4863 5484 6.099269 TCACAGTAAACAAGAAAGGTAGGAGT 59.901 38.462 0.00 0.00 0.00 3.85
4864 5485 7.288389 TCACAGTAAACAAGAAAGGTAGGAGTA 59.712 37.037 0.00 0.00 0.00 2.59
4865 5486 8.095169 CACAGTAAACAAGAAAGGTAGGAGTAT 58.905 37.037 0.00 0.00 0.00 2.12
4866 5487 8.095169 ACAGTAAACAAGAAAGGTAGGAGTATG 58.905 37.037 0.00 0.00 0.00 2.39
4867 5488 8.311836 CAGTAAACAAGAAAGGTAGGAGTATGA 58.688 37.037 0.00 0.00 0.00 2.15
4868 5489 9.047947 AGTAAACAAGAAAGGTAGGAGTATGAT 57.952 33.333 0.00 0.00 0.00 2.45
4869 5490 9.668497 GTAAACAAGAAAGGTAGGAGTATGATT 57.332 33.333 0.00 0.00 0.00 2.57
4880 5501 9.289782 AGGTAGGAGTATGATTTAAAATGATGC 57.710 33.333 0.00 0.00 0.00 3.91
4881 5502 9.289782 GGTAGGAGTATGATTTAAAATGATGCT 57.710 33.333 0.00 0.00 0.00 3.79
4884 5505 9.193806 AGGAGTATGATTTAAAATGATGCTTGT 57.806 29.630 0.00 0.00 0.00 3.16
4885 5506 9.807649 GGAGTATGATTTAAAATGATGCTTGTT 57.192 29.630 0.00 0.00 0.00 2.83
4890 5511 8.883954 TGATTTAAAATGATGCTTGTTTCACA 57.116 26.923 0.00 0.00 0.00 3.58
4891 5512 9.322773 TGATTTAAAATGATGCTTGTTTCACAA 57.677 25.926 0.00 0.00 36.54 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 9.490379 CCCTTCATAAACTAATATAAGAGCGTT 57.510 33.333 0.00 0.00 0.00 4.84
23 24 8.867097 TCCCTTCATAAACTAATATAAGAGCGT 58.133 33.333 0.00 0.00 0.00 5.07
24 25 9.360093 CTCCCTTCATAAACTAATATAAGAGCG 57.640 37.037 0.00 0.00 0.00 5.03
81 82 2.271944 AGTGGCCTAACTCGCTTTTT 57.728 45.000 3.32 0.00 0.00 1.94
82 83 3.412237 TTAGTGGCCTAACTCGCTTTT 57.588 42.857 3.32 0.00 0.00 2.27
83 84 3.629142 ATTAGTGGCCTAACTCGCTTT 57.371 42.857 3.32 0.00 36.03 3.51
84 85 4.748277 TTATTAGTGGCCTAACTCGCTT 57.252 40.909 3.32 0.00 36.03 4.68
85 86 4.748277 TTTATTAGTGGCCTAACTCGCT 57.252 40.909 3.32 0.00 36.03 4.93
86 87 5.054477 TGATTTATTAGTGGCCTAACTCGC 58.946 41.667 3.32 0.00 36.03 5.03
87 88 7.548196 TTTGATTTATTAGTGGCCTAACTCG 57.452 36.000 3.32 0.00 36.03 4.18
88 89 9.788960 CTTTTTGATTTATTAGTGGCCTAACTC 57.211 33.333 3.32 0.00 36.03 3.01
89 90 8.749354 CCTTTTTGATTTATTAGTGGCCTAACT 58.251 33.333 3.32 1.87 36.03 2.24
90 91 8.745590 TCCTTTTTGATTTATTAGTGGCCTAAC 58.254 33.333 3.32 0.00 36.03 2.34
91 92 8.887264 TCCTTTTTGATTTATTAGTGGCCTAA 57.113 30.769 3.32 0.00 37.56 2.69
92 93 7.559897 CCTCCTTTTTGATTTATTAGTGGCCTA 59.440 37.037 3.32 0.00 0.00 3.93
93 94 6.381133 CCTCCTTTTTGATTTATTAGTGGCCT 59.619 38.462 3.32 0.00 0.00 5.19
94 95 6.406961 CCCTCCTTTTTGATTTATTAGTGGCC 60.407 42.308 0.00 0.00 0.00 5.36
95 96 6.379988 TCCCTCCTTTTTGATTTATTAGTGGC 59.620 38.462 0.00 0.00 0.00 5.01
96 97 7.615757 ACTCCCTCCTTTTTGATTTATTAGTGG 59.384 37.037 0.00 0.00 0.00 4.00
97 98 8.581253 ACTCCCTCCTTTTTGATTTATTAGTG 57.419 34.615 0.00 0.00 0.00 2.74
98 99 9.682465 GTACTCCCTCCTTTTTGATTTATTAGT 57.318 33.333 0.00 0.00 0.00 2.24
99 100 9.681062 TGTACTCCCTCCTTTTTGATTTATTAG 57.319 33.333 0.00 0.00 0.00 1.73
101 102 8.803235 GTTGTACTCCCTCCTTTTTGATTTATT 58.197 33.333 0.00 0.00 0.00 1.40
102 103 7.947890 TGTTGTACTCCCTCCTTTTTGATTTAT 59.052 33.333 0.00 0.00 0.00 1.40
103 104 7.291566 TGTTGTACTCCCTCCTTTTTGATTTA 58.708 34.615 0.00 0.00 0.00 1.40
104 105 6.133356 TGTTGTACTCCCTCCTTTTTGATTT 58.867 36.000 0.00 0.00 0.00 2.17
105 106 5.701224 TGTTGTACTCCCTCCTTTTTGATT 58.299 37.500 0.00 0.00 0.00 2.57
106 107 5.319043 TGTTGTACTCCCTCCTTTTTGAT 57.681 39.130 0.00 0.00 0.00 2.57
107 108 4.781775 TGTTGTACTCCCTCCTTTTTGA 57.218 40.909 0.00 0.00 0.00 2.69
108 109 7.703058 AATATGTTGTACTCCCTCCTTTTTG 57.297 36.000 0.00 0.00 0.00 2.44
109 110 9.462606 CTTAATATGTTGTACTCCCTCCTTTTT 57.537 33.333 0.00 0.00 0.00 1.94
110 111 8.832735 TCTTAATATGTTGTACTCCCTCCTTTT 58.167 33.333 0.00 0.00 0.00 2.27
111 112 8.388656 TCTTAATATGTTGTACTCCCTCCTTT 57.611 34.615 0.00 0.00 0.00 3.11
112 113 7.989947 TCTTAATATGTTGTACTCCCTCCTT 57.010 36.000 0.00 0.00 0.00 3.36
113 114 9.845214 ATATCTTAATATGTTGTACTCCCTCCT 57.155 33.333 0.00 0.00 0.00 3.69
141 142 9.793259 TCAGATTAGGTCTTTGTTTTGACTAAT 57.207 29.630 0.00 0.00 34.00 1.73
142 143 9.273016 CTCAGATTAGGTCTTTGTTTTGACTAA 57.727 33.333 0.00 0.00 34.00 2.24
143 144 7.878127 CCTCAGATTAGGTCTTTGTTTTGACTA 59.122 37.037 0.00 0.00 34.00 2.59
144 145 6.712547 CCTCAGATTAGGTCTTTGTTTTGACT 59.287 38.462 0.00 0.00 34.00 3.41
145 146 6.072452 CCCTCAGATTAGGTCTTTGTTTTGAC 60.072 42.308 0.00 0.00 34.00 3.18
146 147 6.003950 CCCTCAGATTAGGTCTTTGTTTTGA 58.996 40.000 0.00 0.00 34.00 2.69
147 148 6.003950 TCCCTCAGATTAGGTCTTTGTTTTG 58.996 40.000 0.00 0.00 34.00 2.44
148 149 6.183361 ACTCCCTCAGATTAGGTCTTTGTTTT 60.183 38.462 0.00 0.00 34.00 2.43
149 150 5.310857 ACTCCCTCAGATTAGGTCTTTGTTT 59.689 40.000 0.00 0.00 34.00 2.83
150 151 4.846940 ACTCCCTCAGATTAGGTCTTTGTT 59.153 41.667 0.00 0.00 34.00 2.83
151 152 4.430441 ACTCCCTCAGATTAGGTCTTTGT 58.570 43.478 0.00 0.00 34.00 2.83
152 153 5.659079 ACTACTCCCTCAGATTAGGTCTTTG 59.341 44.000 0.00 0.00 34.00 2.77
153 154 5.844601 ACTACTCCCTCAGATTAGGTCTTT 58.155 41.667 0.00 0.00 34.00 2.52
154 155 5.475398 ACTACTCCCTCAGATTAGGTCTT 57.525 43.478 0.00 0.00 34.00 3.01
155 156 6.390461 TCTTACTACTCCCTCAGATTAGGTCT 59.610 42.308 0.00 0.00 37.80 3.85
156 157 6.603224 TCTTACTACTCCCTCAGATTAGGTC 58.397 44.000 0.00 0.00 33.17 3.85
157 158 6.593759 TCTTACTACTCCCTCAGATTAGGT 57.406 41.667 0.00 0.00 33.17 3.08
158 159 8.485578 AATTCTTACTACTCCCTCAGATTAGG 57.514 38.462 0.00 0.00 33.17 2.69
159 160 8.581578 GGAATTCTTACTACTCCCTCAGATTAG 58.418 40.741 5.23 0.00 34.65 1.73
160 161 8.065627 TGGAATTCTTACTACTCCCTCAGATTA 58.934 37.037 5.23 0.00 0.00 1.75
161 162 6.903534 TGGAATTCTTACTACTCCCTCAGATT 59.096 38.462 5.23 0.00 0.00 2.40
162 163 6.444704 TGGAATTCTTACTACTCCCTCAGAT 58.555 40.000 5.23 0.00 0.00 2.90
163 164 5.838955 TGGAATTCTTACTACTCCCTCAGA 58.161 41.667 5.23 0.00 0.00 3.27
164 165 5.659079 ACTGGAATTCTTACTACTCCCTCAG 59.341 44.000 5.23 2.10 0.00 3.35
165 166 5.422331 CACTGGAATTCTTACTACTCCCTCA 59.578 44.000 5.23 0.00 0.00 3.86
166 167 5.163395 CCACTGGAATTCTTACTACTCCCTC 60.163 48.000 5.23 0.00 0.00 4.30
167 168 4.717280 CCACTGGAATTCTTACTACTCCCT 59.283 45.833 5.23 0.00 0.00 4.20
168 169 4.715297 TCCACTGGAATTCTTACTACTCCC 59.285 45.833 5.23 0.00 0.00 4.30
169 170 5.934402 TCCACTGGAATTCTTACTACTCC 57.066 43.478 5.23 0.00 0.00 3.85
182 183 4.281435 TCACAACGTACTATTCCACTGGAA 59.719 41.667 13.08 13.08 46.39 3.53
183 184 3.827876 TCACAACGTACTATTCCACTGGA 59.172 43.478 0.00 0.00 0.00 3.86
184 185 4.182693 TCACAACGTACTATTCCACTGG 57.817 45.455 0.00 0.00 0.00 4.00
185 186 7.821595 TTAATCACAACGTACTATTCCACTG 57.178 36.000 0.00 0.00 0.00 3.66
186 187 9.095065 GATTTAATCACAACGTACTATTCCACT 57.905 33.333 0.00 0.00 0.00 4.00
187 188 9.095065 AGATTTAATCACAACGTACTATTCCAC 57.905 33.333 7.74 0.00 0.00 4.02
194 195 8.529476 ACCTTCTAGATTTAATCACAACGTACT 58.471 33.333 7.74 0.00 0.00 2.73
195 196 8.699283 ACCTTCTAGATTTAATCACAACGTAC 57.301 34.615 7.74 0.00 0.00 3.67
196 197 9.146984 CAACCTTCTAGATTTAATCACAACGTA 57.853 33.333 7.74 0.00 0.00 3.57
197 198 7.876068 TCAACCTTCTAGATTTAATCACAACGT 59.124 33.333 7.74 0.00 0.00 3.99
198 199 8.251750 TCAACCTTCTAGATTTAATCACAACG 57.748 34.615 7.74 0.00 0.00 4.10
199 200 8.178313 GCTCAACCTTCTAGATTTAATCACAAC 58.822 37.037 7.74 0.00 0.00 3.32
200 201 7.882791 TGCTCAACCTTCTAGATTTAATCACAA 59.117 33.333 7.74 0.00 0.00 3.33
201 202 7.394016 TGCTCAACCTTCTAGATTTAATCACA 58.606 34.615 7.74 0.00 0.00 3.58
202 203 7.849804 TGCTCAACCTTCTAGATTTAATCAC 57.150 36.000 7.74 0.00 0.00 3.06
211 212 4.245660 CGAAACATGCTCAACCTTCTAGA 58.754 43.478 0.00 0.00 0.00 2.43
212 213 3.181516 GCGAAACATGCTCAACCTTCTAG 60.182 47.826 0.00 0.00 0.00 2.43
234 235 0.914551 CGACAAGATCAACGGCGTAG 59.085 55.000 15.20 0.00 0.00 3.51
236 237 1.736645 CCGACAAGATCAACGGCGT 60.737 57.895 6.77 6.77 38.98 5.68
239 240 2.024176 AATCCCGACAAGATCAACGG 57.976 50.000 11.11 11.11 44.16 4.44
240 241 3.000041 TGAAATCCCGACAAGATCAACG 59.000 45.455 0.00 0.00 0.00 4.10
245 246 8.531146 ACAAAAATTATGAAATCCCGACAAGAT 58.469 29.630 0.00 0.00 0.00 2.40
247 248 8.532977 AACAAAAATTATGAAATCCCGACAAG 57.467 30.769 0.00 0.00 0.00 3.16
249 250 7.928706 ACAAACAAAAATTATGAAATCCCGACA 59.071 29.630 0.00 0.00 0.00 4.35
252 253 8.555361 ACAACAAACAAAAATTATGAAATCCCG 58.445 29.630 0.00 0.00 0.00 5.14
266 267 5.293569 ACGTGAAACCAAACAACAAACAAAA 59.706 32.000 0.00 0.00 0.00 2.44
277 278 0.101579 CCCCACACGTGAAACCAAAC 59.898 55.000 25.01 0.00 0.00 2.93
289 291 0.839946 ATAGACCATCTGCCCCACAC 59.160 55.000 0.00 0.00 0.00 3.82
290 292 0.839277 CATAGACCATCTGCCCCACA 59.161 55.000 0.00 0.00 0.00 4.17
297 299 4.192429 TGACACACACATAGACCATCTG 57.808 45.455 0.00 0.00 0.00 2.90
304 306 7.042119 CCGCATTATAAATGACACACACATAGA 60.042 37.037 3.86 0.00 0.00 1.98
307 309 5.356751 ACCGCATTATAAATGACACACACAT 59.643 36.000 3.86 0.00 0.00 3.21
313 315 7.635423 TCATAACACCGCATTATAAATGACAC 58.365 34.615 3.86 0.00 0.00 3.67
315 317 7.750458 CCATCATAACACCGCATTATAAATGAC 59.250 37.037 3.86 0.00 0.00 3.06
317 319 7.028962 CCCATCATAACACCGCATTATAAATG 58.971 38.462 0.00 0.00 0.00 2.32
318 320 6.350110 GCCCATCATAACACCGCATTATAAAT 60.350 38.462 0.00 0.00 0.00 1.40
320 322 4.457603 GCCCATCATAACACCGCATTATAA 59.542 41.667 0.00 0.00 0.00 0.98
322 324 2.819608 GCCCATCATAACACCGCATTAT 59.180 45.455 0.00 0.00 0.00 1.28
327 333 1.065551 GAAAGCCCATCATAACACCGC 59.934 52.381 0.00 0.00 0.00 5.68
328 334 2.643551 AGAAAGCCCATCATAACACCG 58.356 47.619 0.00 0.00 0.00 4.94
329 335 4.016444 TCAAGAAAGCCCATCATAACACC 58.984 43.478 0.00 0.00 0.00 4.16
335 341 1.004745 ACCGTCAAGAAAGCCCATCAT 59.995 47.619 0.00 0.00 0.00 2.45
338 344 0.110486 ACACCGTCAAGAAAGCCCAT 59.890 50.000 0.00 0.00 0.00 4.00
342 348 3.251004 AGAAATCACACCGTCAAGAAAGC 59.749 43.478 0.00 0.00 0.00 3.51
347 353 5.862924 AACATAGAAATCACACCGTCAAG 57.137 39.130 0.00 0.00 0.00 3.02
352 358 5.755375 AGCAGATAACATAGAAATCACACCG 59.245 40.000 0.00 0.00 0.00 4.94
353 359 8.552034 GTTAGCAGATAACATAGAAATCACACC 58.448 37.037 3.59 0.00 42.89 4.16
357 363 9.109393 GTTGGTTAGCAGATAACATAGAAATCA 57.891 33.333 10.67 0.00 44.81 2.57
362 368 7.418337 TGAGTTGGTTAGCAGATAACATAGA 57.582 36.000 10.67 0.00 44.81 1.98
363 369 9.197694 GTATGAGTTGGTTAGCAGATAACATAG 57.802 37.037 10.67 0.00 44.81 2.23
365 371 7.796054 AGTATGAGTTGGTTAGCAGATAACAT 58.204 34.615 10.67 0.00 44.81 2.71
366 372 7.182817 AGTATGAGTTGGTTAGCAGATAACA 57.817 36.000 10.67 0.00 44.81 2.41
370 376 8.082852 CGTATAAGTATGAGTTGGTTAGCAGAT 58.917 37.037 0.00 0.00 0.00 2.90
373 379 6.976349 CACGTATAAGTATGAGTTGGTTAGCA 59.024 38.462 0.00 0.00 0.00 3.49
374 380 6.420008 CCACGTATAAGTATGAGTTGGTTAGC 59.580 42.308 0.00 0.00 0.00 3.09
376 382 7.643569 TCCACGTATAAGTATGAGTTGGTTA 57.356 36.000 0.00 0.00 0.00 2.85
395 401 0.453282 CAGCGCAAGAAACATCCACG 60.453 55.000 11.47 0.00 43.02 4.94
399 405 1.470098 ACCATCAGCGCAAGAAACATC 59.530 47.619 11.47 0.00 43.02 3.06
401 407 0.874390 GACCATCAGCGCAAGAAACA 59.126 50.000 11.47 0.00 43.02 2.83
404 410 3.874873 CGACCATCAGCGCAAGAA 58.125 55.556 11.47 0.00 43.02 2.52
411 417 1.664965 GATACCCGCGACCATCAGC 60.665 63.158 8.23 0.00 0.00 4.26
415 421 0.468226 AACATGATACCCGCGACCAT 59.532 50.000 8.23 0.00 0.00 3.55
416 422 0.461163 CAACATGATACCCGCGACCA 60.461 55.000 8.23 0.00 0.00 4.02
417 423 1.157870 CCAACATGATACCCGCGACC 61.158 60.000 8.23 0.00 0.00 4.79
418 424 0.461339 ACCAACATGATACCCGCGAC 60.461 55.000 8.23 0.00 0.00 5.19
419 425 0.250793 AACCAACATGATACCCGCGA 59.749 50.000 8.23 0.00 0.00 5.87
420 426 0.655733 GAACCAACATGATACCCGCG 59.344 55.000 0.00 0.00 0.00 6.46
421 427 2.038387 AGAACCAACATGATACCCGC 57.962 50.000 0.00 0.00 0.00 6.13
422 428 3.120792 CGTAGAACCAACATGATACCCG 58.879 50.000 0.00 0.00 0.00 5.28
423 429 3.118519 ACCGTAGAACCAACATGATACCC 60.119 47.826 0.00 0.00 0.00 3.69
430 441 3.695830 ATGACACCGTAGAACCAACAT 57.304 42.857 0.00 0.00 0.00 2.71
438 449 6.461927 GGAACACCAATATATGACACCGTAGA 60.462 42.308 0.00 0.00 0.00 2.59
466 479 3.946558 GTCCTCTCGCTACCTAGAGAAAA 59.053 47.826 0.00 0.00 42.22 2.29
470 483 1.202557 ACGTCCTCTCGCTACCTAGAG 60.203 57.143 0.00 0.00 39.19 2.43
475 488 2.102553 GCACGTCCTCTCGCTACC 59.897 66.667 0.00 0.00 0.00 3.18
489 502 1.021968 AAAACTCAACAGTCCCGCAC 58.978 50.000 0.00 0.00 29.93 5.34
492 505 3.473625 ACCTAAAAACTCAACAGTCCCG 58.526 45.455 0.00 0.00 29.93 5.14
495 508 6.095021 AGACCAAACCTAAAAACTCAACAGTC 59.905 38.462 0.00 0.00 29.93 3.51
496 509 5.949952 AGACCAAACCTAAAAACTCAACAGT 59.050 36.000 0.00 0.00 0.00 3.55
498 511 6.844097 AAGACCAAACCTAAAAACTCAACA 57.156 33.333 0.00 0.00 0.00 3.33
501 514 6.859017 GTCAAAGACCAAACCTAAAAACTCA 58.141 36.000 0.00 0.00 0.00 3.41
519 532 3.768757 TCATAATTTGGGCTGGGTCAAAG 59.231 43.478 0.00 0.00 36.49 2.77
520 533 3.784178 TCATAATTTGGGCTGGGTCAAA 58.216 40.909 0.00 0.00 37.29 2.69
525 558 5.104817 AGTTTGATTCATAATTTGGGCTGGG 60.105 40.000 0.00 0.00 0.00 4.45
530 563 9.439500 AATGTTGAGTTTGATTCATAATTTGGG 57.561 29.630 0.00 0.00 0.00 4.12
539 572 6.267471 AGGCCTTTAATGTTGAGTTTGATTCA 59.733 34.615 0.00 0.00 0.00 2.57
542 575 6.670695 AAGGCCTTTAATGTTGAGTTTGAT 57.329 33.333 13.78 0.00 0.00 2.57
560 593 7.360017 CGGTTTTCAAGAATCAATTTTAAGGCC 60.360 37.037 0.00 0.00 0.00 5.19
561 594 7.170828 ACGGTTTTCAAGAATCAATTTTAAGGC 59.829 33.333 0.00 0.00 0.00 4.35
567 600 6.478673 GGTCAACGGTTTTCAAGAATCAATTT 59.521 34.615 0.00 0.00 0.00 1.82
593 626 5.236047 TGGATTTGCTTTTTGATTCAAACCG 59.764 36.000 11.30 6.86 32.79 4.44
594 627 6.616774 TGGATTTGCTTTTTGATTCAAACC 57.383 33.333 11.30 7.57 32.79 3.27
605 638 8.518430 AGGTGTTTAATTTTGGATTTGCTTTT 57.482 26.923 0.00 0.00 0.00 2.27
606 639 7.772757 TGAGGTGTTTAATTTTGGATTTGCTTT 59.227 29.630 0.00 0.00 0.00 3.51
627 660 8.860088 AGCTCTTGTGTTTAATTTAATTGAGGT 58.140 29.630 0.00 0.00 0.00 3.85
630 663 9.393249 CGAAGCTCTTGTGTTTAATTTAATTGA 57.607 29.630 0.00 0.00 0.00 2.57
631 664 9.393249 TCGAAGCTCTTGTGTTTAATTTAATTG 57.607 29.630 0.00 0.00 0.00 2.32
632 665 9.959749 TTCGAAGCTCTTGTGTTTAATTTAATT 57.040 25.926 0.00 0.00 0.00 1.40
633 666 9.959749 TTTCGAAGCTCTTGTGTTTAATTTAAT 57.040 25.926 0.00 0.00 0.00 1.40
634 667 9.959749 ATTTCGAAGCTCTTGTGTTTAATTTAA 57.040 25.926 0.00 0.00 0.00 1.52
635 668 9.959749 AATTTCGAAGCTCTTGTGTTTAATTTA 57.040 25.926 0.00 0.00 0.00 1.40
636 669 8.871686 AATTTCGAAGCTCTTGTGTTTAATTT 57.128 26.923 0.00 0.00 0.00 1.82
637 670 9.959749 TTAATTTCGAAGCTCTTGTGTTTAATT 57.040 25.926 0.00 0.00 0.00 1.40
639 672 9.445786 CTTTAATTTCGAAGCTCTTGTGTTTAA 57.554 29.630 0.00 0.00 0.00 1.52
641 674 6.918022 CCTTTAATTTCGAAGCTCTTGTGTTT 59.082 34.615 0.00 0.00 0.00 2.83
642 675 6.438763 CCTTTAATTTCGAAGCTCTTGTGTT 58.561 36.000 0.00 0.00 0.00 3.32
644 677 4.853743 GCCTTTAATTTCGAAGCTCTTGTG 59.146 41.667 0.00 0.00 0.00 3.33
646 679 4.091424 CGCCTTTAATTTCGAAGCTCTTG 58.909 43.478 0.00 0.00 0.00 3.02
647 680 3.751698 ACGCCTTTAATTTCGAAGCTCTT 59.248 39.130 0.00 0.00 0.00 2.85
649 682 3.741805 ACGCCTTTAATTTCGAAGCTC 57.258 42.857 0.00 0.00 0.00 4.09
650 683 5.813080 AATACGCCTTTAATTTCGAAGCT 57.187 34.783 0.00 0.00 0.00 3.74
651 684 7.404203 TCTAAATACGCCTTTAATTTCGAAGC 58.596 34.615 0.00 0.00 0.00 3.86
652 685 9.370126 CATCTAAATACGCCTTTAATTTCGAAG 57.630 33.333 0.00 0.00 0.00 3.79
653 686 9.100554 TCATCTAAATACGCCTTTAATTTCGAA 57.899 29.630 0.00 0.00 0.00 3.71
654 687 8.651391 TCATCTAAATACGCCTTTAATTTCGA 57.349 30.769 0.00 0.00 0.00 3.71
664 697 9.427821 AGAAGGATATATCATCTAAATACGCCT 57.572 33.333 14.60 0.00 0.00 5.52
682 1033 6.474140 TTATACGTGCAAGGAAGAAGGATA 57.526 37.500 4.26 0.00 0.00 2.59
705 1056 8.257602 TGTGTGTGGTACTAATATGGTGATAT 57.742 34.615 0.00 0.00 0.00 1.63
706 1057 7.663043 TGTGTGTGGTACTAATATGGTGATA 57.337 36.000 0.00 0.00 0.00 2.15
707 1058 6.553953 TGTGTGTGGTACTAATATGGTGAT 57.446 37.500 0.00 0.00 0.00 3.06
708 1059 6.361768 TTGTGTGTGGTACTAATATGGTGA 57.638 37.500 0.00 0.00 0.00 4.02
709 1060 6.093495 CCTTTGTGTGTGGTACTAATATGGTG 59.907 42.308 0.00 0.00 0.00 4.17
710 1061 6.177610 CCTTTGTGTGTGGTACTAATATGGT 58.822 40.000 0.00 0.00 0.00 3.55
711 1062 5.588648 CCCTTTGTGTGTGGTACTAATATGG 59.411 44.000 0.00 0.00 0.00 2.74
712 1063 6.411376 TCCCTTTGTGTGTGGTACTAATATG 58.589 40.000 0.00 0.00 0.00 1.78
713 1064 6.630203 TCCCTTTGTGTGTGGTACTAATAT 57.370 37.500 0.00 0.00 0.00 1.28
717 1068 4.774660 TTTCCCTTTGTGTGTGGTACTA 57.225 40.909 0.00 0.00 0.00 1.82
719 1070 4.722361 TTTTTCCCTTTGTGTGTGGTAC 57.278 40.909 0.00 0.00 0.00 3.34
741 1092 1.164041 CGTGCGTCCAACTTTCCCTT 61.164 55.000 0.00 0.00 0.00 3.95
742 1093 1.597027 CGTGCGTCCAACTTTCCCT 60.597 57.895 0.00 0.00 0.00 4.20
743 1094 1.890510 ACGTGCGTCCAACTTTCCC 60.891 57.895 0.00 0.00 0.00 3.97
744 1095 1.278637 CACGTGCGTCCAACTTTCC 59.721 57.895 0.82 0.00 0.00 3.13
855 1206 1.266446 TGCATCATGTGACGGTTGTTG 59.734 47.619 0.00 0.00 0.00 3.33
956 1327 2.557056 TCGAGCCGAGGTATTTATCTGG 59.443 50.000 0.00 0.00 0.00 3.86
974 1345 3.172106 TGGGGTTGGTTGGCTCGA 61.172 61.111 0.00 0.00 0.00 4.04
987 1358 4.029809 GTTCGGGTGGGACTGGGG 62.030 72.222 0.00 0.00 0.00 4.96
1079 1471 2.572284 GAGACGTGGAGAACCGGG 59.428 66.667 6.32 0.00 39.42 5.73
1173 1570 1.222936 CCAGAGGCCGAAGCAAGAT 59.777 57.895 0.00 0.00 42.56 2.40
1179 1576 0.108138 CCACTAACCAGAGGCCGAAG 60.108 60.000 0.00 0.00 0.00 3.79
1199 1605 5.056894 CAATCTTGCTTCCTCCAAAGAAG 57.943 43.478 0.00 0.00 42.99 2.85
1227 1633 1.153628 GGCGTCGTGCTACTGGATT 60.154 57.895 0.00 0.00 45.43 3.01
1228 1634 2.494918 GGCGTCGTGCTACTGGAT 59.505 61.111 0.00 0.00 45.43 3.41
1229 1635 4.111016 CGGCGTCGTGCTACTGGA 62.111 66.667 0.00 0.00 45.43 3.86
1232 1638 3.966026 GAAGCGGCGTCGTGCTACT 62.966 63.158 12.58 0.00 45.43 2.57
1243 1649 3.125573 GAAGGGAACGGAAGCGGC 61.126 66.667 0.00 0.00 0.00 6.53
1244 1650 2.436115 GGAAGGGAACGGAAGCGG 60.436 66.667 0.00 0.00 0.00 5.52
1245 1651 2.436115 GGGAAGGGAACGGAAGCG 60.436 66.667 0.00 0.00 0.00 4.68
1246 1652 2.045242 GGGGAAGGGAACGGAAGC 60.045 66.667 0.00 0.00 0.00 3.86
1247 1653 2.267961 CGGGGAAGGGAACGGAAG 59.732 66.667 0.00 0.00 0.00 3.46
1248 1654 4.024545 GCGGGGAAGGGAACGGAA 62.025 66.667 0.00 0.00 0.00 4.30
1252 1658 4.772687 GACGGCGGGGAAGGGAAC 62.773 72.222 13.24 0.00 0.00 3.62
1372 1823 1.469251 CCATCTAACTGTCGACCACCG 60.469 57.143 14.12 1.38 40.25 4.94
1448 1916 4.787598 ACTGAAAATTTGCATCGACTGAC 58.212 39.130 0.00 0.00 0.00 3.51
1515 1986 3.650281 TGCCACTATCCATGTCAACAT 57.350 42.857 0.00 0.00 36.96 2.71
1519 1990 2.092968 GGTCTTGCCACTATCCATGTCA 60.093 50.000 0.00 0.00 37.17 3.58
1564 2037 4.642429 ACACTTAGTTCCGCTTCAGATTT 58.358 39.130 0.00 0.00 0.00 2.17
1565 2038 4.273148 ACACTTAGTTCCGCTTCAGATT 57.727 40.909 0.00 0.00 0.00 2.40
1566 2039 3.963428 ACACTTAGTTCCGCTTCAGAT 57.037 42.857 0.00 0.00 0.00 2.90
1583 2076 5.986135 CCTGAGGTATTCTGCATAACTACAC 59.014 44.000 0.00 0.00 35.29 2.90
1601 2094 3.511934 ACTACAACTAGTTCTGCCTGAGG 59.488 47.826 4.77 0.00 27.62 3.86
1604 2097 6.893958 CATAACTACAACTAGTTCTGCCTG 57.106 41.667 4.77 0.00 41.51 4.85
1723 2224 6.888632 AGTTCTGATCCAGTTATTCTGCATTT 59.111 34.615 0.00 0.00 42.38 2.32
1729 2230 8.105829 ACAATCAAGTTCTGATCCAGTTATTCT 58.894 33.333 0.00 0.00 44.43 2.40
1739 2240 7.189693 TGTTGTACACAATCAAGTTCTGATC 57.810 36.000 0.00 0.00 44.43 2.92
1799 2309 1.460743 CACTCATTGTACACGCCACTG 59.539 52.381 0.00 0.00 0.00 3.66
1811 2321 3.036819 TCAGAGATCTCCCCACTCATTG 58.963 50.000 19.30 7.70 33.69 2.82
1903 2416 6.591935 TGAAGTATTCCCCATTCATGAGTAC 58.408 40.000 0.00 0.00 46.93 2.73
1913 2429 5.069516 GCACATTGATTGAAGTATTCCCCAT 59.930 40.000 0.00 0.00 46.93 4.00
1980 2500 3.254089 TCATCAGATGCTCCATACCCAT 58.746 45.455 5.41 0.00 0.00 4.00
2030 2550 6.142259 TGTATTAACAAAGGGGAAGCCTTA 57.858 37.500 0.00 0.00 30.91 2.69
2157 2684 2.451490 TCTGTCCTCTGCTTCTGTAGG 58.549 52.381 0.00 0.00 0.00 3.18
2223 2750 1.876156 GGAATTGGACATCTGATCGCC 59.124 52.381 0.00 0.00 0.00 5.54
2267 2794 5.576563 TTCTAGTTGACCAGGGAATTGAA 57.423 39.130 0.00 0.00 0.00 2.69
2275 2802 6.040878 CCGTAGTAAATTCTAGTTGACCAGG 58.959 44.000 0.00 0.00 0.00 4.45
2326 2853 9.403583 GGTGGGTTTATAATAACTTCTGATCAA 57.596 33.333 0.00 0.00 0.00 2.57
2328 2855 8.974060 TGGTGGGTTTATAATAACTTCTGATC 57.026 34.615 0.00 0.00 0.00 2.92
2340 2867 5.522315 TCAAGACCATGGTGGGTTTATAA 57.478 39.130 25.52 0.00 43.37 0.98
2499 3028 6.702329 AGCAGAGTGTACTAGCTGTAAAATT 58.298 36.000 9.73 0.00 36.48 1.82
2626 3165 6.872020 CCTGTACGGTCTGAATAAAGAAGAAA 59.128 38.462 0.00 0.00 0.00 2.52
2679 3218 5.826737 CCTTGCTCACCATAAAATCAGAGAT 59.173 40.000 0.00 0.00 0.00 2.75
2804 3353 6.959639 ATTTACTCCACAGCTCAAAAGAAA 57.040 33.333 0.00 0.00 0.00 2.52
2943 3495 0.730494 GATTGCTTGCACGAACTGGC 60.730 55.000 0.00 0.00 0.00 4.85
2979 3531 3.004752 ACTTTCCAAGCACAGAACTGT 57.995 42.857 1.32 1.32 46.17 3.55
3385 3941 5.195940 ACAGCTCATAACAGCCAATAACAT 58.804 37.500 0.00 0.00 40.65 2.71
3426 3983 0.482446 AACAGCCAATGGGTTCCAGA 59.518 50.000 0.00 0.00 36.75 3.86
3440 4000 6.045318 TGATCTTGCTCTACTTATCAACAGC 58.955 40.000 0.00 0.00 0.00 4.40
3467 4027 8.848474 TCCTGTTATCTTTCAAAACTAAGGAG 57.152 34.615 0.00 0.00 0.00 3.69
3473 4033 9.225436 GAAGATCTCCTGTTATCTTTCAAAACT 57.775 33.333 0.00 0.00 41.40 2.66
3474 4034 9.003658 TGAAGATCTCCTGTTATCTTTCAAAAC 57.996 33.333 0.00 0.00 41.40 2.43
3477 4037 7.772292 CCATGAAGATCTCCTGTTATCTTTCAA 59.228 37.037 0.00 0.00 41.40 2.69
3478 4038 7.092712 ACCATGAAGATCTCCTGTTATCTTTCA 60.093 37.037 0.00 0.00 41.40 2.69
3479 4039 7.278875 ACCATGAAGATCTCCTGTTATCTTTC 58.721 38.462 0.00 0.00 41.40 2.62
3480 4040 7.205515 ACCATGAAGATCTCCTGTTATCTTT 57.794 36.000 0.00 0.00 41.40 2.52
3481 4041 6.821616 ACCATGAAGATCTCCTGTTATCTT 57.178 37.500 0.00 0.00 43.44 2.40
3482 4042 6.385176 TCAACCATGAAGATCTCCTGTTATCT 59.615 38.462 0.00 0.00 33.87 1.98
3483 4043 6.481644 GTCAACCATGAAGATCTCCTGTTATC 59.518 42.308 0.00 0.00 37.30 1.75
3484 4044 6.352516 GTCAACCATGAAGATCTCCTGTTAT 58.647 40.000 0.00 0.00 37.30 1.89
3485 4045 5.338381 GGTCAACCATGAAGATCTCCTGTTA 60.338 44.000 0.00 0.00 37.30 2.41
3486 4046 4.566488 GGTCAACCATGAAGATCTCCTGTT 60.566 45.833 0.00 0.00 37.30 3.16
3487 4047 3.054802 GGTCAACCATGAAGATCTCCTGT 60.055 47.826 0.00 0.00 37.30 4.00
3488 4048 3.199508 AGGTCAACCATGAAGATCTCCTG 59.800 47.826 0.00 0.00 37.30 3.86
3489 4049 3.199508 CAGGTCAACCATGAAGATCTCCT 59.800 47.826 0.00 0.00 37.30 3.69
3490 4050 3.198635 TCAGGTCAACCATGAAGATCTCC 59.801 47.826 0.00 0.00 37.30 3.71
3491 4051 4.478206 TCAGGTCAACCATGAAGATCTC 57.522 45.455 0.00 0.00 37.30 2.75
3492 4052 4.916041 TTCAGGTCAACCATGAAGATCT 57.084 40.909 1.33 0.00 37.30 2.75
3493 4053 6.521151 AATTTCAGGTCAACCATGAAGATC 57.479 37.500 1.33 0.00 37.30 2.75
3494 4054 6.694447 CAAATTTCAGGTCAACCATGAAGAT 58.306 36.000 1.33 3.78 37.30 2.40
3495 4055 5.509501 GCAAATTTCAGGTCAACCATGAAGA 60.510 40.000 1.33 2.01 37.30 2.87
3496 4056 4.687483 GCAAATTTCAGGTCAACCATGAAG 59.313 41.667 1.33 0.00 37.30 3.02
3497 4057 4.502950 GGCAAATTTCAGGTCAACCATGAA 60.503 41.667 1.33 6.06 37.30 2.57
3498 4058 3.006752 GGCAAATTTCAGGTCAACCATGA 59.993 43.478 1.33 0.13 38.89 3.07
3499 4059 3.244146 TGGCAAATTTCAGGTCAACCATG 60.244 43.478 1.33 0.00 38.89 3.66
3500 4060 2.971330 TGGCAAATTTCAGGTCAACCAT 59.029 40.909 1.33 0.00 38.89 3.55
3501 4061 2.392662 TGGCAAATTTCAGGTCAACCA 58.607 42.857 1.33 0.00 38.89 3.67
3502 4062 3.683365 ATGGCAAATTTCAGGTCAACC 57.317 42.857 0.00 0.00 0.00 3.77
3503 4063 7.100458 AGTATATGGCAAATTTCAGGTCAAC 57.900 36.000 0.00 0.00 0.00 3.18
3504 4064 6.321181 GGAGTATATGGCAAATTTCAGGTCAA 59.679 38.462 0.00 0.00 0.00 3.18
3505 4065 5.827797 GGAGTATATGGCAAATTTCAGGTCA 59.172 40.000 0.00 0.00 0.00 4.02
3506 4066 5.049405 CGGAGTATATGGCAAATTTCAGGTC 60.049 44.000 0.00 0.00 0.00 3.85
3507 4067 4.821805 CGGAGTATATGGCAAATTTCAGGT 59.178 41.667 0.00 0.00 0.00 4.00
3508 4068 4.821805 ACGGAGTATATGGCAAATTTCAGG 59.178 41.667 0.00 0.00 41.94 3.86
3524 4084 3.008330 GTGAGCTCAGAAGTACGGAGTA 58.992 50.000 18.89 0.00 45.11 2.59
3526 4086 1.133407 GGTGAGCTCAGAAGTACGGAG 59.867 57.143 18.89 0.00 42.23 4.63
3527 4087 1.174783 GGTGAGCTCAGAAGTACGGA 58.825 55.000 18.89 0.00 0.00 4.69
3528 4088 1.178276 AGGTGAGCTCAGAAGTACGG 58.822 55.000 18.89 0.00 0.00 4.02
3529 4089 2.029828 ACAAGGTGAGCTCAGAAGTACG 60.030 50.000 18.89 4.80 0.00 3.67
3568 4128 5.906113 TGAAGTTTCACAAAGCTTTGGTA 57.094 34.783 35.65 23.36 42.34 3.25
3694 4254 7.093771 ACAAGGCCAAAGAATATTTACAGAAGG 60.094 37.037 5.01 0.00 0.00 3.46
3748 4308 3.581770 TGAAATTTGATGGTGGGCATCAA 59.418 39.130 0.00 0.00 44.40 2.57
3877 4437 3.928754 TCCTCTGTAGGCCAAGACATAT 58.071 45.455 5.01 0.00 43.31 1.78
3972 4533 3.370366 GCATCAGCTTATCGCCTCATAAG 59.630 47.826 0.00 0.00 40.39 1.73
4023 4590 1.518929 GTGAGCATCGCGACATAAGAC 59.481 52.381 12.93 0.00 38.61 3.01
4115 4683 5.186198 AGACTAAATACCACCAACATCTGC 58.814 41.667 0.00 0.00 0.00 4.26
4265 4877 9.307121 CTCATTACTATCTTTGGTAGTTCACAG 57.693 37.037 0.00 0.00 34.43 3.66
4266 4878 9.031537 TCTCATTACTATCTTTGGTAGTTCACA 57.968 33.333 0.00 0.00 34.43 3.58
4267 4879 9.303537 GTCTCATTACTATCTTTGGTAGTTCAC 57.696 37.037 0.00 0.00 34.43 3.18
4268 4880 9.031537 TGTCTCATTACTATCTTTGGTAGTTCA 57.968 33.333 0.00 0.00 34.43 3.18
4270 4882 8.812972 TGTGTCTCATTACTATCTTTGGTAGTT 58.187 33.333 0.00 0.00 34.43 2.24
4273 4885 8.258007 CCTTGTGTCTCATTACTATCTTTGGTA 58.742 37.037 0.00 0.00 0.00 3.25
4274 4886 7.038302 TCCTTGTGTCTCATTACTATCTTTGGT 60.038 37.037 0.00 0.00 0.00 3.67
4275 4887 7.331026 TCCTTGTGTCTCATTACTATCTTTGG 58.669 38.462 0.00 0.00 0.00 3.28
4338 4950 0.105964 TGGATTATGACCCCGCTTCG 59.894 55.000 0.00 0.00 0.00 3.79
4344 4956 1.494721 TGCCTTCTGGATTATGACCCC 59.505 52.381 0.00 0.00 34.57 4.95
4460 5072 1.972795 AGGCCATCTTTTTGCACATGT 59.027 42.857 5.01 0.00 0.00 3.21
4464 5076 0.033781 TGCAGGCCATCTTTTTGCAC 59.966 50.000 5.01 0.00 39.61 4.57
4490 5102 2.051882 GCATGACCGCGCATTAGC 60.052 61.111 8.75 0.00 37.42 3.09
4500 5112 2.988010 TACTGATCACCAGCATGACC 57.012 50.000 0.00 0.00 46.81 4.02
4510 5122 6.201044 CAGGTAATTTCCGACATACTGATCAC 59.799 42.308 0.00 0.00 0.00 3.06
4525 5140 1.807226 GTGGCCGGCAGGTAATTTC 59.193 57.895 30.85 7.78 40.50 2.17
4566 5181 1.471684 GCCAACATGAAGGAGCTCTTG 59.528 52.381 14.64 8.09 35.50 3.02
4590 5205 6.056236 GGTGAATTTCAGGTACCCTCTTATC 58.944 44.000 8.74 1.83 0.00 1.75
4654 5269 1.801178 CTCCAAGTTGCTCCGTCTTTC 59.199 52.381 0.00 0.00 0.00 2.62
4664 5279 1.664151 GTACGGCATACTCCAAGTTGC 59.336 52.381 0.00 6.00 34.10 4.17
4742 5363 0.109913 GGGGGTCCGAGAAAAGTTGT 59.890 55.000 0.00 0.00 0.00 3.32
4744 5365 1.627329 GTAGGGGGTCCGAGAAAAGTT 59.373 52.381 0.00 0.00 38.33 2.66
4812 5433 5.351458 AGAATGCACAACTGTTTTTCCTTC 58.649 37.500 0.00 0.00 0.00 3.46
4813 5434 5.343307 AGAATGCACAACTGTTTTTCCTT 57.657 34.783 0.00 0.00 0.00 3.36
4816 5437 6.955407 GTGAAAAGAATGCACAACTGTTTTTC 59.045 34.615 0.00 0.33 35.17 2.29
4817 5438 6.426328 TGTGAAAAGAATGCACAACTGTTTTT 59.574 30.769 0.00 0.00 39.36 1.94
4824 5445 6.529829 TGTTTACTGTGAAAAGAATGCACAAC 59.470 34.615 0.00 0.00 41.45 3.32
4828 5449 7.094508 TCTTGTTTACTGTGAAAAGAATGCA 57.905 32.000 0.00 0.00 0.00 3.96
4834 5455 8.129211 CCTACCTTTCTTGTTTACTGTGAAAAG 58.871 37.037 0.00 0.00 0.00 2.27
4840 5461 6.496144 ACTCCTACCTTTCTTGTTTACTGT 57.504 37.500 0.00 0.00 0.00 3.55
4841 5462 8.311836 TCATACTCCTACCTTTCTTGTTTACTG 58.688 37.037 0.00 0.00 0.00 2.74
4843 5464 9.668497 AATCATACTCCTACCTTTCTTGTTTAC 57.332 33.333 0.00 0.00 0.00 2.01
4854 5475 9.289782 GCATCATTTTAAATCATACTCCTACCT 57.710 33.333 0.00 0.00 0.00 3.08
4855 5476 9.289782 AGCATCATTTTAAATCATACTCCTACC 57.710 33.333 0.00 0.00 0.00 3.18
4858 5479 9.193806 ACAAGCATCATTTTAAATCATACTCCT 57.806 29.630 0.00 0.00 0.00 3.69
4859 5480 9.807649 AACAAGCATCATTTTAAATCATACTCC 57.192 29.630 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.