Multiple sequence alignment - TraesCS7D01G475900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G475900 chr7D 100.000 8179 0 0 1 8179 587805724 587813902 0.000000e+00 15104.0
1 TraesCS7D01G475900 chr7D 94.737 171 8 1 6537 6707 56399639 56399808 1.750000e-66 265.0
2 TraesCS7D01G475900 chr7A 93.380 6027 224 71 616 6542 679750547 679756498 0.000000e+00 8757.0
3 TraesCS7D01G475900 chr7A 94.559 827 34 7 6712 7531 679756515 679757337 0.000000e+00 1267.0
4 TraesCS7D01G475900 chr7A 87.539 321 24 7 7747 8053 679757736 679758054 2.810000e-94 357.0
5 TraesCS7D01G475900 chr7A 89.873 79 3 2 543 616 679750448 679750526 6.760000e-16 97.1
6 TraesCS7D01G475900 chr7B 94.472 3600 126 23 2968 6542 659246342 659249893 0.000000e+00 5478.0
7 TraesCS7D01G475900 chr7B 90.000 2680 175 49 304 2930 659243698 659246337 0.000000e+00 3378.0
8 TraesCS7D01G475900 chr7B 94.143 700 23 10 6961 7646 659250187 659250882 0.000000e+00 1050.0
9 TraesCS7D01G475900 chr7B 86.667 435 35 17 7758 8179 659250931 659251355 2.080000e-125 460.0
10 TraesCS7D01G475900 chr7B 94.595 296 12 3 6704 6995 659249891 659250186 9.680000e-124 455.0
11 TraesCS7D01G475900 chr7B 88.571 140 16 0 2 141 659242841 659242980 3.930000e-38 171.0
12 TraesCS7D01G475900 chr7B 95.455 44 2 0 3383 3426 662205398 662205355 4.100000e-08 71.3
13 TraesCS7D01G475900 chr5D 91.919 198 11 5 6517 6711 42949749 42949554 1.050000e-68 272.0
14 TraesCS7D01G475900 chr3D 95.808 167 5 2 6539 6705 450884623 450884459 1.350000e-67 268.0
15 TraesCS7D01G475900 chr2D 94.253 174 8 2 6533 6705 420278329 420278157 1.750000e-66 265.0
16 TraesCS7D01G475900 chr2D 92.021 188 11 4 6520 6705 399677035 399676850 2.260000e-65 261.0
17 TraesCS7D01G475900 chr5A 93.258 178 10 2 6537 6713 210834349 210834173 2.260000e-65 261.0
18 TraesCS7D01G475900 chr4A 93.714 175 10 1 6533 6707 554787864 554788037 2.260000e-65 261.0
19 TraesCS7D01G475900 chr4A 97.727 44 1 0 3383 3426 705322969 705322926 8.800000e-10 76.8
20 TraesCS7D01G475900 chr4D 91.489 188 12 4 6520 6705 452900876 452901061 1.050000e-63 255.0
21 TraesCS7D01G475900 chr4B 90.674 193 15 3 6524 6715 54366982 54367172 3.790000e-63 254.0
22 TraesCS7D01G475900 chr4B 90.164 61 6 0 2636 2696 248358465 248358405 6.800000e-11 80.5
23 TraesCS7D01G475900 chr2A 84.653 202 31 0 3225 3426 10578389 10578590 1.390000e-47 202.0
24 TraesCS7D01G475900 chrUn 83.663 202 33 0 3225 3426 295943219 295943018 3.010000e-44 191.0
25 TraesCS7D01G475900 chrUn 83.663 202 33 0 3225 3426 376737999 376738200 3.010000e-44 191.0
26 TraesCS7D01G475900 chrUn 85.156 128 10 4 2989 3114 376737764 376737884 1.110000e-23 122.0
27 TraesCS7D01G475900 chr3B 83.663 202 33 0 3225 3426 728487961 728487760 3.010000e-44 191.0
28 TraesCS7D01G475900 chr3B 85.950 121 10 3 2994 3114 728488189 728488076 1.110000e-23 122.0
29 TraesCS7D01G475900 chr2B 83.663 202 33 0 3225 3426 184643335 184643536 3.010000e-44 191.0
30 TraesCS7D01G475900 chr1D 85.156 128 10 4 2989 3114 61774345 61774465 1.110000e-23 122.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G475900 chr7D 587805724 587813902 8178 False 15104.000 15104 100.00000 1 8179 1 chr7D.!!$F2 8178
1 TraesCS7D01G475900 chr7A 679750448 679758054 7606 False 2619.525 8757 91.33775 543 8053 4 chr7A.!!$F1 7510
2 TraesCS7D01G475900 chr7B 659242841 659251355 8514 False 1832.000 5478 91.40800 2 8179 6 chr7B.!!$F1 8177

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
460 1023 0.038166 TCAATGTGGGGCCTGTCTTC 59.962 55.000 0.84 0.00 0.00 2.87 F
513 1078 0.243636 AGCCAAATTAGTGCGCAACC 59.756 50.000 14.00 0.00 0.00 3.77 F
532 1097 0.322456 CGGAAGGAGGTTTGGCATGA 60.322 55.000 0.00 0.00 0.00 3.07 F
1719 2363 0.385473 CAAGGTAAAACACAGCGCGG 60.385 55.000 8.83 5.83 0.00 6.46 F
1736 2388 1.269517 GCGGTTTTGCCTCACATTGAA 60.270 47.619 0.00 0.00 34.25 2.69 F
3116 3791 0.321122 CAGGCGCTCTCAAAGGTCTT 60.321 55.000 7.64 0.00 0.00 3.01 F
4149 4835 0.254178 ATGATGCTTCCTTCCGTGCT 59.746 50.000 0.00 0.00 0.00 4.40 F
4152 4838 0.326264 ATGCTTCCTTCCGTGCTTCT 59.674 50.000 0.00 0.00 0.00 2.85 F
6078 6783 0.798776 AATTGTGTAGCAGCAGACGC 59.201 50.000 0.00 0.00 38.99 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1309 1935 0.031314 CGATCCAGACACCATCGGAG 59.969 60.000 0.00 0.0 36.58 4.63 R
2330 2997 1.072806 AGATCCTGCAAACTCACAGCA 59.927 47.619 0.00 0.0 36.72 4.41 R
2453 3120 2.092211 GTGTTCTCAAATACGGTCTGCG 59.908 50.000 0.00 0.0 0.00 5.18 R
2654 3329 1.909700 TGATGCCCTGAAACTCCAAC 58.090 50.000 0.00 0.0 0.00 3.77 R
3306 3983 2.030007 AGGCAACGTCATTGTCAATTGG 60.030 45.455 5.42 0.0 46.04 3.16 R
5056 5759 1.066858 CCTACAGTGCAGACGATGGTT 60.067 52.381 0.00 0.0 0.00 3.67 R
6078 6783 0.249573 CTGGGCTTTTGTGCAACTGG 60.250 55.000 0.00 0.0 38.04 4.00 R
6088 6793 0.471780 CCCCTTTGACCTGGGCTTTT 60.472 55.000 0.00 0.0 42.03 2.27 R
7783 8763 0.939419 GTTTCTACCACGCACCGTTT 59.061 50.000 0.00 0.0 38.32 3.60 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.834610 ACTCATCGTGTTTCTTCTACGG 58.165 45.455 0.00 0.00 38.29 4.02
32 33 2.029739 TCATCGTGTTTCTTCTACGGCA 60.030 45.455 0.00 0.00 38.29 5.69
47 48 0.807667 CGGCAAGGAGGAGAACATCG 60.808 60.000 0.00 0.00 0.00 3.84
52 53 1.144936 GGAGGAGAACATCGGGCAG 59.855 63.158 0.00 0.00 0.00 4.85
66 67 1.964223 CGGGCAGCTCTTATTCTCCTA 59.036 52.381 0.00 0.00 0.00 2.94
69 70 2.362717 GGCAGCTCTTATTCTCCTACGT 59.637 50.000 0.00 0.00 0.00 3.57
73 74 3.381908 AGCTCTTATTCTCCTACGTGTGG 59.618 47.826 0.00 0.00 0.00 4.17
83 84 3.875134 CTCCTACGTGTGGTTTCAAAAGT 59.125 43.478 0.00 0.00 0.00 2.66
85 86 4.333372 TCCTACGTGTGGTTTCAAAAGTTC 59.667 41.667 0.00 0.00 0.00 3.01
93 94 4.645136 GTGGTTTCAAAAGTTCTTCTCCCT 59.355 41.667 0.00 0.00 0.00 4.20
94 95 4.644685 TGGTTTCAAAAGTTCTTCTCCCTG 59.355 41.667 0.00 0.00 0.00 4.45
98 99 3.716872 TCAAAAGTTCTTCTCCCTGGTCT 59.283 43.478 0.00 0.00 0.00 3.85
102 103 2.835156 AGTTCTTCTCCCTGGTCTTAGC 59.165 50.000 0.00 0.00 0.00 3.09
108 109 2.043115 TCTCCCTGGTCTTAGCTCTTCA 59.957 50.000 0.00 0.00 0.00 3.02
111 112 3.198635 TCCCTGGTCTTAGCTCTTCATTG 59.801 47.826 0.00 0.00 0.00 2.82
142 505 4.147322 CCATCGACGTGGTTGCGC 62.147 66.667 0.00 0.00 34.46 6.09
150 513 4.395583 GTGGTTGCGCTGCTCTGC 62.396 66.667 9.73 0.00 0.00 4.26
161 524 3.782244 GCTCTGCGCGTGTGGAAG 61.782 66.667 8.43 0.00 0.00 3.46
162 525 3.114616 CTCTGCGCGTGTGGAAGG 61.115 66.667 8.43 0.00 0.00 3.46
163 526 4.680237 TCTGCGCGTGTGGAAGGG 62.680 66.667 8.43 0.00 0.00 3.95
164 527 4.988598 CTGCGCGTGTGGAAGGGT 62.989 66.667 8.43 0.00 0.00 4.34
165 528 4.980805 TGCGCGTGTGGAAGGGTC 62.981 66.667 8.43 0.00 0.00 4.46
169 532 4.388499 CGTGTGGAAGGGTCGGGG 62.388 72.222 0.00 0.00 0.00 5.73
182 545 4.929707 CGGGGCGCCAGGGTATTC 62.930 72.222 30.85 7.76 0.00 1.75
185 548 2.515901 GGCGCCAGGGTATTCCAT 59.484 61.111 24.80 0.00 38.24 3.41
195 558 1.014352 GGTATTCCATGACACCACGC 58.986 55.000 0.00 0.00 0.00 5.34
211 575 1.064208 CACGCTGCTACTGATAGTCGT 59.936 52.381 0.00 0.00 34.05 4.34
213 577 1.657816 CGCTGCTACTGATAGTCGTCG 60.658 57.143 0.00 0.00 0.00 5.12
244 608 1.588239 TGATGTTGATGCCCTCCTCT 58.412 50.000 0.00 0.00 0.00 3.69
247 611 0.615331 TGTTGATGCCCTCCTCTGAC 59.385 55.000 0.00 0.00 0.00 3.51
250 614 1.323271 TGATGCCCTCCTCTGACGAC 61.323 60.000 0.00 0.00 0.00 4.34
252 616 0.904865 ATGCCCTCCTCTGACGACAA 60.905 55.000 0.00 0.00 0.00 3.18
256 620 0.534412 CCTCCTCTGACGACAATGCT 59.466 55.000 0.00 0.00 0.00 3.79
269 633 1.808799 AATGCTGCTCGTGCTCTCG 60.809 57.895 11.19 0.00 40.48 4.04
272 636 1.356979 GCTGCTCGTGCTCTCGATA 59.643 57.895 11.19 0.00 39.12 2.92
273 637 0.932585 GCTGCTCGTGCTCTCGATAC 60.933 60.000 11.19 0.00 39.12 2.24
283 647 2.766263 TGCTCTCGATACTTGGGTTCAT 59.234 45.455 0.00 0.00 0.00 2.57
284 648 3.958147 TGCTCTCGATACTTGGGTTCATA 59.042 43.478 0.00 0.00 0.00 2.15
285 649 4.404394 TGCTCTCGATACTTGGGTTCATAA 59.596 41.667 0.00 0.00 0.00 1.90
286 650 5.070446 TGCTCTCGATACTTGGGTTCATAAT 59.930 40.000 0.00 0.00 0.00 1.28
287 651 5.992217 GCTCTCGATACTTGGGTTCATAATT 59.008 40.000 0.00 0.00 0.00 1.40
288 652 6.146347 GCTCTCGATACTTGGGTTCATAATTC 59.854 42.308 0.00 0.00 0.00 2.17
289 653 7.119709 TCTCGATACTTGGGTTCATAATTCA 57.880 36.000 0.00 0.00 0.00 2.57
290 654 7.561251 TCTCGATACTTGGGTTCATAATTCAA 58.439 34.615 0.00 0.00 0.00 2.69
291 655 7.494625 TCTCGATACTTGGGTTCATAATTCAAC 59.505 37.037 0.00 0.00 0.00 3.18
292 656 7.106890 TCGATACTTGGGTTCATAATTCAACA 58.893 34.615 0.00 0.00 0.00 3.33
293 657 7.773224 TCGATACTTGGGTTCATAATTCAACAT 59.227 33.333 0.00 0.00 0.00 2.71
294 658 7.857389 CGATACTTGGGTTCATAATTCAACATG 59.143 37.037 0.00 0.00 0.00 3.21
295 659 5.723295 ACTTGGGTTCATAATTCAACATGC 58.277 37.500 0.00 0.00 0.00 4.06
296 660 5.245751 ACTTGGGTTCATAATTCAACATGCA 59.754 36.000 0.00 0.00 0.00 3.96
297 661 5.936187 TGGGTTCATAATTCAACATGCAT 57.064 34.783 0.00 0.00 0.00 3.96
298 662 5.662456 TGGGTTCATAATTCAACATGCATG 58.338 37.500 25.09 25.09 0.00 4.06
299 663 5.051816 GGGTTCATAATTCAACATGCATGG 58.948 41.667 29.41 13.66 0.00 3.66
300 664 5.051816 GGTTCATAATTCAACATGCATGGG 58.948 41.667 29.41 20.66 0.00 4.00
301 665 5.395546 GGTTCATAATTCAACATGCATGGGT 60.396 40.000 29.41 14.93 0.00 4.51
302 666 5.936187 TCATAATTCAACATGCATGGGTT 57.064 34.783 29.41 13.76 0.00 4.11
303 667 7.264221 GTTCATAATTCAACATGCATGGGTTA 58.736 34.615 29.41 18.72 0.00 2.85
304 668 6.804677 TCATAATTCAACATGCATGGGTTAC 58.195 36.000 29.41 0.00 0.00 2.50
305 669 4.470334 AATTCAACATGCATGGGTTACC 57.530 40.909 29.41 0.00 37.24 2.85
329 892 7.608761 ACCAAGAGAGTACTTCTAGTTCTAGTG 59.391 40.741 0.00 4.61 35.87 2.74
388 951 2.152830 CAACGGGATTCACGGGTTTAA 58.847 47.619 13.70 0.00 35.23 1.52
409 972 1.427819 CCGGGCTACATTTCGCAAC 59.572 57.895 0.00 0.00 0.00 4.17
417 980 3.248602 GCTACATTTCGCAACATCCTAGG 59.751 47.826 0.82 0.82 0.00 3.02
421 984 2.851263 TTCGCAACATCCTAGGTTGT 57.149 45.000 18.14 18.14 45.64 3.32
427 990 3.189287 GCAACATCCTAGGTTGTGAGTTG 59.811 47.826 23.24 18.27 45.64 3.16
449 1012 3.499737 GAGGCGCGGTCAATGTGG 61.500 66.667 8.83 0.00 0.00 4.17
454 1017 4.740822 GCGGTCAATGTGGGGCCT 62.741 66.667 0.84 0.00 0.00 5.19
455 1018 2.751436 CGGTCAATGTGGGGCCTG 60.751 66.667 0.84 0.00 0.00 4.85
456 1019 2.440599 GGTCAATGTGGGGCCTGT 59.559 61.111 0.84 0.00 0.00 4.00
458 1021 1.380302 GTCAATGTGGGGCCTGTCT 59.620 57.895 0.84 0.00 0.00 3.41
460 1023 0.038166 TCAATGTGGGGCCTGTCTTC 59.962 55.000 0.84 0.00 0.00 2.87
462 1025 1.434513 AATGTGGGGCCTGTCTTCCA 61.435 55.000 0.84 0.00 0.00 3.53
463 1026 1.217057 ATGTGGGGCCTGTCTTCCAT 61.217 55.000 0.84 0.00 0.00 3.41
464 1027 0.548926 TGTGGGGCCTGTCTTCCATA 60.549 55.000 0.84 0.00 0.00 2.74
465 1028 0.846693 GTGGGGCCTGTCTTCCATAT 59.153 55.000 0.84 0.00 0.00 1.78
466 1029 2.054799 GTGGGGCCTGTCTTCCATATA 58.945 52.381 0.84 0.00 0.00 0.86
467 1030 2.644798 GTGGGGCCTGTCTTCCATATAT 59.355 50.000 0.84 0.00 0.00 0.86
468 1031 3.844211 GTGGGGCCTGTCTTCCATATATA 59.156 47.826 0.84 0.00 0.00 0.86
469 1032 4.080863 GTGGGGCCTGTCTTCCATATATAG 60.081 50.000 0.84 0.00 0.00 1.31
476 1041 6.622549 CCTGTCTTCCATATATAGAACGACC 58.377 44.000 14.52 0.00 0.00 4.79
485 1050 8.885722 TCCATATATAGAACGACCAAAACAAAC 58.114 33.333 0.00 0.00 0.00 2.93
492 1057 7.924103 AGAACGACCAAAACAAACATAATTC 57.076 32.000 0.00 0.00 0.00 2.17
493 1058 7.484975 AGAACGACCAAAACAAACATAATTCA 58.515 30.769 0.00 0.00 0.00 2.57
494 1059 7.976734 AGAACGACCAAAACAAACATAATTCAA 59.023 29.630 0.00 0.00 0.00 2.69
496 1061 6.200097 ACGACCAAAACAAACATAATTCAAGC 59.800 34.615 0.00 0.00 0.00 4.01
497 1062 6.346518 CGACCAAAACAAACATAATTCAAGCC 60.347 38.462 0.00 0.00 0.00 4.35
501 1066 8.351461 CCAAAACAAACATAATTCAAGCCAAAT 58.649 29.630 0.00 0.00 0.00 2.32
502 1067 9.733219 CAAAACAAACATAATTCAAGCCAAATT 57.267 25.926 0.00 0.00 0.00 1.82
506 1071 9.206870 ACAAACATAATTCAAGCCAAATTAGTG 57.793 29.630 0.00 0.00 33.40 2.74
508 1073 6.035843 ACATAATTCAAGCCAAATTAGTGCG 58.964 36.000 0.00 0.00 33.40 5.34
509 1074 2.346099 TTCAAGCCAAATTAGTGCGC 57.654 45.000 0.00 0.00 0.00 6.09
511 1076 1.611006 TCAAGCCAAATTAGTGCGCAA 59.389 42.857 14.00 0.00 0.00 4.85
513 1078 0.243636 AGCCAAATTAGTGCGCAACC 59.756 50.000 14.00 0.00 0.00 3.77
514 1079 1.070471 GCCAAATTAGTGCGCAACCG 61.070 55.000 14.00 0.00 37.57 4.44
515 1080 0.455972 CCAAATTAGTGCGCAACCGG 60.456 55.000 14.00 0.00 34.32 5.28
516 1081 0.519519 CAAATTAGTGCGCAACCGGA 59.480 50.000 14.00 0.00 34.32 5.14
518 1083 0.802494 AATTAGTGCGCAACCGGAAG 59.198 50.000 14.00 0.00 36.28 3.46
530 1095 4.743018 CGGAAGGAGGTTTGGCAT 57.257 55.556 0.00 0.00 0.00 4.40
531 1096 2.183409 CGGAAGGAGGTTTGGCATG 58.817 57.895 0.00 0.00 0.00 4.06
532 1097 0.322456 CGGAAGGAGGTTTGGCATGA 60.322 55.000 0.00 0.00 0.00 3.07
533 1098 1.886222 CGGAAGGAGGTTTGGCATGAA 60.886 52.381 0.00 0.00 0.00 2.57
534 1099 2.460669 GGAAGGAGGTTTGGCATGAAT 58.539 47.619 0.00 0.00 0.00 2.57
535 1100 2.833943 GGAAGGAGGTTTGGCATGAATT 59.166 45.455 0.00 0.00 0.00 2.17
536 1101 3.118992 GGAAGGAGGTTTGGCATGAATTC 60.119 47.826 0.00 0.00 0.00 2.17
537 1102 3.173953 AGGAGGTTTGGCATGAATTCA 57.826 42.857 11.26 11.26 0.00 2.57
538 1103 3.509442 AGGAGGTTTGGCATGAATTCAA 58.491 40.909 13.09 0.00 0.00 2.69
539 1104 3.259123 AGGAGGTTTGGCATGAATTCAAC 59.741 43.478 13.09 7.74 0.00 3.18
770 1367 8.566008 AATAAACAATTACTACTACTACGCGG 57.434 34.615 12.47 0.00 0.00 6.46
771 1368 4.558538 ACAATTACTACTACTACGCGGG 57.441 45.455 12.47 5.29 0.00 6.13
882 1482 1.609783 CCCCTTCATCACCACCTCC 59.390 63.158 0.00 0.00 0.00 4.30
1107 1727 3.532155 CCTTCTCCCCTCCGCTCG 61.532 72.222 0.00 0.00 0.00 5.03
1242 1864 2.125106 GACAGCGGCGGAGGATTT 60.125 61.111 9.78 0.00 0.00 2.17
1245 1867 3.717294 AGCGGCGGAGGATTTGGT 61.717 61.111 9.78 0.00 0.00 3.67
1246 1868 3.202706 GCGGCGGAGGATTTGGTC 61.203 66.667 9.78 0.00 0.00 4.02
1247 1869 2.584608 CGGCGGAGGATTTGGTCT 59.415 61.111 0.00 0.00 0.00 3.85
1271 1897 1.996786 GCTGGCCGTGTGATGATTGG 61.997 60.000 0.00 0.00 0.00 3.16
1273 1899 2.404789 GCCGTGTGATGATTGGCG 59.595 61.111 0.00 0.00 35.77 5.69
1282 1908 1.215173 TGATGATTGGCGGGGAGATTT 59.785 47.619 0.00 0.00 0.00 2.17
1300 1926 2.186602 TTGTCGAATTGGGCGGCCTA 62.187 55.000 29.87 23.01 31.27 3.93
1522 2166 1.070289 GACGTGAAGGGGTTGTCTTCT 59.930 52.381 0.00 0.00 40.73 2.85
1528 2172 3.714798 TGAAGGGGTTGTCTTCTTACTGT 59.285 43.478 0.00 0.00 40.73 3.55
1531 2175 5.899631 AGGGGTTGTCTTCTTACTGTTTA 57.100 39.130 0.00 0.00 0.00 2.01
1532 2176 5.618236 AGGGGTTGTCTTCTTACTGTTTAC 58.382 41.667 0.00 0.00 0.00 2.01
1535 2179 5.469084 GGGTTGTCTTCTTACTGTTTACTGG 59.531 44.000 0.00 0.00 0.00 4.00
1565 2209 2.670229 GCATTGTCTCACCATTGTGCTG 60.670 50.000 0.00 0.00 42.46 4.41
1570 2214 0.520404 CTCACCATTGTGCTGTGCTC 59.480 55.000 0.00 0.00 42.46 4.26
1573 2217 1.338973 CACCATTGTGCTGTGCTCTTT 59.661 47.619 0.00 0.00 35.31 2.52
1585 2229 1.620819 GTGCTCTTTCAGGTCTCTGGA 59.379 52.381 0.00 0.00 41.23 3.86
1663 2307 2.202797 CACGACAGCCTCATCGGG 60.203 66.667 0.00 0.00 42.67 5.14
1707 2351 5.116180 CGATTCAGCTACAATCCAAGGTAA 58.884 41.667 10.57 0.00 0.00 2.85
1709 2353 6.093495 CGATTCAGCTACAATCCAAGGTAAAA 59.907 38.462 10.57 0.00 0.00 1.52
1712 2356 5.472137 TCAGCTACAATCCAAGGTAAAACAC 59.528 40.000 0.00 0.00 0.00 3.32
1719 2363 0.385473 CAAGGTAAAACACAGCGCGG 60.385 55.000 8.83 5.83 0.00 6.46
1736 2388 1.269517 GCGGTTTTGCCTCACATTGAA 60.270 47.619 0.00 0.00 34.25 2.69
1745 2397 3.511146 TGCCTCACATTGAATTTTCTCCC 59.489 43.478 0.00 0.00 0.00 4.30
1748 2400 4.527816 CCTCACATTGAATTTTCTCCCCAA 59.472 41.667 0.00 0.00 0.00 4.12
1749 2401 5.011943 CCTCACATTGAATTTTCTCCCCAAA 59.988 40.000 0.00 0.00 0.00 3.28
1755 2407 3.818773 TGAATTTTCTCCCCAAAGACGTC 59.181 43.478 7.70 7.70 0.00 4.34
1765 2417 4.286549 TCCCCAAAGACGTCCATAACTAAA 59.713 41.667 13.01 0.00 0.00 1.85
1770 2435 7.753580 CCCAAAGACGTCCATAACTAAAATTTC 59.246 37.037 13.01 0.00 0.00 2.17
1855 2520 5.048643 TGTTGAGAACGAAAAAGGTGAAACA 60.049 36.000 0.00 0.00 39.98 2.83
1872 2537 5.971202 GTGAAACACGAACTGATTTTGATGT 59.029 36.000 0.00 0.00 36.32 3.06
2019 2685 6.097356 AGATAAATGAAGCAAGCACACATTG 58.903 36.000 10.30 0.00 32.66 2.82
2108 2774 8.831550 CCTCTGAAAACTATTGCTATTAAGTCC 58.168 37.037 0.00 0.00 0.00 3.85
2226 2893 7.857885 GTGATAACATGCTACAAAAGATAAGGC 59.142 37.037 0.00 0.00 0.00 4.35
2416 3083 4.647611 TCTTGTTGTACAATCCGTGGATT 58.352 39.130 12.26 8.33 44.73 3.01
2604 3279 6.439058 AGACCTGCTACTTCATTTCTTCTACT 59.561 38.462 0.00 0.00 0.00 2.57
2654 3329 4.689484 CAGGACACAGTGCTGGAG 57.311 61.111 10.35 0.00 45.87 3.86
2720 3395 7.596995 CACGTAAAGCATTTTCCCTTCATAAAA 59.403 33.333 0.00 0.00 40.09 1.52
2854 3529 5.540719 GCCTCTTCTAACAGGACAGGTATAT 59.459 44.000 0.00 0.00 30.32 0.86
2857 3532 7.287927 CCTCTTCTAACAGGACAGGTATATGAA 59.712 40.741 0.00 0.00 30.32 2.57
2883 3558 3.440522 GCTACTCAAAACAATGTCCTCCC 59.559 47.826 0.00 0.00 0.00 4.30
2892 3567 6.850752 AAACAATGTCCTCCCGATAAAAAT 57.149 33.333 0.00 0.00 0.00 1.82
2930 3605 8.043836 CGTGTCAATATTTATTTGTCAAATGCG 58.956 33.333 19.10 0.54 32.38 4.73
2936 3611 6.740411 ATTTATTTGTCAAATGCGCCAAAT 57.260 29.167 19.10 19.19 39.88 2.32
3039 3714 1.597027 CGCACTGTTTCCCTCGGTT 60.597 57.895 0.00 0.00 0.00 4.44
3116 3791 0.321122 CAGGCGCTCTCAAAGGTCTT 60.321 55.000 7.64 0.00 0.00 3.01
3294 3971 1.422531 ATGAGATGGCTGAGGTCCTC 58.577 55.000 12.40 12.40 0.00 3.71
3390 4067 1.463674 CTAACACCTCCAACATGCCC 58.536 55.000 0.00 0.00 0.00 5.36
3621 4301 4.637387 TGGTTTCCCCGTTTGTATCTAA 57.363 40.909 0.00 0.00 35.15 2.10
3658 4338 9.250624 GATTGTAGATACTGGCTAGTTTTAGTG 57.749 37.037 8.46 0.00 38.36 2.74
3676 4356 0.482446 TGTTTCTGGGGCTTCATGGT 59.518 50.000 0.00 0.00 0.00 3.55
3710 4390 9.953697 TGAAAACACACCATATAAAAAGTGTAC 57.046 29.630 0.00 0.00 41.35 2.90
3903 4587 3.356290 ACATCTTGTAGTGAATTGGCCC 58.644 45.455 0.00 0.00 0.00 5.80
4148 4834 1.599542 GTATGATGCTTCCTTCCGTGC 59.400 52.381 0.00 0.00 0.00 5.34
4149 4835 0.254178 ATGATGCTTCCTTCCGTGCT 59.746 50.000 0.00 0.00 0.00 4.40
4151 4837 0.729690 GATGCTTCCTTCCGTGCTTC 59.270 55.000 0.00 0.00 0.00 3.86
4152 4838 0.326264 ATGCTTCCTTCCGTGCTTCT 59.674 50.000 0.00 0.00 0.00 2.85
4153 4839 0.973632 TGCTTCCTTCCGTGCTTCTA 59.026 50.000 0.00 0.00 0.00 2.10
4154 4840 1.066858 TGCTTCCTTCCGTGCTTCTAG 60.067 52.381 0.00 0.00 0.00 2.43
4186 4887 5.405269 GCCATTTTTGTGACTTATGTTCACC 59.595 40.000 0.25 0.00 33.80 4.02
4359 5062 6.795399 AGCTTGTTGACATTAAATAATCCGG 58.205 36.000 0.00 0.00 0.00 5.14
4366 5069 6.891388 TGACATTAAATAATCCGGTGGTAGT 58.109 36.000 0.00 0.00 0.00 2.73
4440 5143 5.762045 TCTTTGCTGCAGAAGTAAAATCAC 58.238 37.500 20.43 0.00 39.60 3.06
4441 5144 5.299028 TCTTTGCTGCAGAAGTAAAATCACA 59.701 36.000 20.43 0.00 39.60 3.58
4442 5145 5.710513 TTGCTGCAGAAGTAAAATCACAT 57.289 34.783 20.43 0.00 0.00 3.21
4443 5146 5.300969 TGCTGCAGAAGTAAAATCACATC 57.699 39.130 20.43 0.00 0.00 3.06
4444 5147 4.761227 TGCTGCAGAAGTAAAATCACATCA 59.239 37.500 20.43 0.00 0.00 3.07
4445 5148 5.416639 TGCTGCAGAAGTAAAATCACATCAT 59.583 36.000 20.43 0.00 0.00 2.45
4446 5149 6.598850 TGCTGCAGAAGTAAAATCACATCATA 59.401 34.615 20.43 0.00 0.00 2.15
4447 5150 6.909357 GCTGCAGAAGTAAAATCACATCATAC 59.091 38.462 20.43 0.00 0.00 2.39
4448 5151 7.414429 GCTGCAGAAGTAAAATCACATCATACA 60.414 37.037 20.43 0.00 0.00 2.29
4449 5152 8.510243 TGCAGAAGTAAAATCACATCATACAT 57.490 30.769 0.00 0.00 0.00 2.29
4450 5153 8.400186 TGCAGAAGTAAAATCACATCATACATG 58.600 33.333 0.00 0.00 0.00 3.21
4451 5154 8.615211 GCAGAAGTAAAATCACATCATACATGA 58.385 33.333 0.00 0.00 41.70 3.07
4536 5239 7.693969 ATTGAGTTAAAAGCTACTCTTGCAT 57.306 32.000 14.00 1.33 41.05 3.96
4542 5245 7.607991 AGTTAAAAGCTACTCTTGCATACATGT 59.392 33.333 2.69 2.69 34.67 3.21
4816 5519 6.014070 TCAGTATTGTGCAGGTAAGGAAACTA 60.014 38.462 0.00 0.00 42.68 2.24
4824 5527 4.094442 GCAGGTAAGGAAACTATTCGGTTG 59.906 45.833 0.00 0.00 42.68 3.77
4825 5528 5.243207 CAGGTAAGGAAACTATTCGGTTGT 58.757 41.667 0.00 0.00 42.68 3.32
4876 5579 9.950680 ATAATTTCCATTGCTTTGTTACTATCG 57.049 29.630 0.00 0.00 0.00 2.92
4887 5590 9.398538 TGCTTTGTTACTATCGGGTATTAATTT 57.601 29.630 0.00 0.00 0.00 1.82
5056 5759 2.031069 GTGCTCTCTGTTGTACTGACGA 60.031 50.000 0.00 0.00 0.00 4.20
5197 5900 5.741011 TGTCCAGGTATTCATGTTTACCTC 58.259 41.667 19.84 12.97 45.05 3.85
5205 5908 3.211803 TCATGTTTACCTCGTGTCTCG 57.788 47.619 0.00 0.00 41.41 4.04
5618 6322 1.411216 CCCCGTGAGTGATACCCTACT 60.411 57.143 0.00 0.00 0.00 2.57
5619 6323 1.955080 CCCGTGAGTGATACCCTACTC 59.045 57.143 0.00 0.00 42.77 2.59
5659 6363 7.994425 TCTTCTAACTGCATAACCATTTGAA 57.006 32.000 0.00 0.00 0.00 2.69
5672 6376 8.680001 CATAACCATTTGAACTCTGATCATGAA 58.320 33.333 0.00 0.00 0.00 2.57
5772 6476 8.534333 TCAATACATTAGCGAATCAGGTAATC 57.466 34.615 6.58 0.00 41.25 1.75
5773 6477 8.147704 TCAATACATTAGCGAATCAGGTAATCA 58.852 33.333 6.58 1.32 41.25 2.57
5803 6508 6.303839 TCTGTGACCTTTTTACTGCCTAAAT 58.696 36.000 0.00 0.00 0.00 1.40
5833 6538 5.032863 GCTTAGATTGCACAAACAGCATAG 58.967 41.667 0.00 0.00 42.33 2.23
5834 6539 5.565592 TTAGATTGCACAAACAGCATAGG 57.434 39.130 0.00 0.00 42.33 2.57
5956 6661 6.266131 TCTAGGGGATTATTGCAGAAATGT 57.734 37.500 0.74 0.00 0.00 2.71
6062 6767 6.951778 ACTGCTAGTTGTATTTAACCCCAATT 59.048 34.615 0.00 0.00 0.00 2.32
6076 6781 1.470098 CCCAATTGTGTAGCAGCAGAC 59.530 52.381 4.43 0.00 0.00 3.51
6078 6783 0.798776 AATTGTGTAGCAGCAGACGC 59.201 50.000 0.00 0.00 38.99 5.19
6088 6793 3.279116 GCAGACGCCAGTTGCACA 61.279 61.111 0.00 0.00 41.33 4.57
6127 6832 5.005740 GGGGATTTCAGTTTAACTACCGTT 58.994 41.667 0.00 0.00 37.15 4.44
6164 6869 3.378427 GCATTCAGTCATTCACCTAACCC 59.622 47.826 0.00 0.00 0.00 4.11
6166 6871 4.553330 TTCAGTCATTCACCTAACCCTC 57.447 45.455 0.00 0.00 0.00 4.30
6230 6935 2.804986 TGTGCCCTCATCATGCTAAA 57.195 45.000 0.00 0.00 0.00 1.85
6242 6947 2.807967 TCATGCTAAACACTGTGTCAGC 59.192 45.455 27.47 27.47 34.37 4.26
6243 6948 1.217001 TGCTAAACACTGTGTCAGCG 58.783 50.000 27.84 14.84 34.37 5.18
6244 6949 0.110644 GCTAAACACTGTGTCAGCGC 60.111 55.000 23.25 15.95 34.37 5.92
6245 6950 1.502231 CTAAACACTGTGTCAGCGCT 58.498 50.000 14.68 2.64 34.37 5.92
6246 6951 1.193203 CTAAACACTGTGTCAGCGCTG 59.807 52.381 31.53 31.53 34.37 5.18
6247 6952 0.744414 AAACACTGTGTCAGCGCTGT 60.744 50.000 34.70 13.84 37.69 4.40
6248 6953 2.933666 CACTGTGTCAGCGCTGTG 59.066 61.111 34.70 21.51 44.35 3.66
6249 6954 2.969238 ACTGTGTCAGCGCTGTGC 60.969 61.111 34.70 27.22 46.98 4.57
6375 7081 6.594788 AATCACACAAGCATGAGGTTTAAT 57.405 33.333 0.00 0.00 32.07 1.40
6442 7149 7.114953 GCAATGAGCTGGAACTTAAAACTAAAC 59.885 37.037 0.00 0.00 41.15 2.01
6488 7195 5.106712 TGCACAAAAGAGAAATAAGGTAGCG 60.107 40.000 0.00 0.00 0.00 4.26
6545 7263 8.854614 AAGAATGCATCTTATATTGTACTCCC 57.145 34.615 0.00 0.00 46.65 4.30
6546 7264 8.212259 AGAATGCATCTTATATTGTACTCCCT 57.788 34.615 0.00 0.00 33.39 4.20
6547 7265 8.317679 AGAATGCATCTTATATTGTACTCCCTC 58.682 37.037 0.00 0.00 33.39 4.30
6549 7267 6.997655 TGCATCTTATATTGTACTCCCTCTG 58.002 40.000 0.00 0.00 0.00 3.35
6551 7269 7.071196 TGCATCTTATATTGTACTCCCTCTGTT 59.929 37.037 0.00 0.00 0.00 3.16
6552 7270 7.600752 GCATCTTATATTGTACTCCCTCTGTTC 59.399 40.741 0.00 0.00 0.00 3.18
6553 7271 7.598759 TCTTATATTGTACTCCCTCTGTTCC 57.401 40.000 0.00 0.00 0.00 3.62
6554 7272 6.553852 TCTTATATTGTACTCCCTCTGTTCCC 59.446 42.308 0.00 0.00 0.00 3.97
6556 7274 2.409064 TGTACTCCCTCTGTTCCCAA 57.591 50.000 0.00 0.00 0.00 4.12
6557 7275 2.696775 TGTACTCCCTCTGTTCCCAAA 58.303 47.619 0.00 0.00 0.00 3.28
6558 7276 3.256704 TGTACTCCCTCTGTTCCCAAAT 58.743 45.455 0.00 0.00 0.00 2.32
6559 7277 4.431378 TGTACTCCCTCTGTTCCCAAATA 58.569 43.478 0.00 0.00 0.00 1.40
6561 7279 5.491078 TGTACTCCCTCTGTTCCCAAATATT 59.509 40.000 0.00 0.00 0.00 1.28
6562 7280 6.674861 TGTACTCCCTCTGTTCCCAAATATTA 59.325 38.462 0.00 0.00 0.00 0.98
6563 7281 6.652205 ACTCCCTCTGTTCCCAAATATTAA 57.348 37.500 0.00 0.00 0.00 1.40
6564 7282 6.663734 ACTCCCTCTGTTCCCAAATATTAAG 58.336 40.000 0.00 0.00 0.00 1.85
6565 7283 6.217693 ACTCCCTCTGTTCCCAAATATTAAGT 59.782 38.462 0.00 0.00 0.00 2.24
6566 7284 6.659824 TCCCTCTGTTCCCAAATATTAAGTC 58.340 40.000 0.00 0.00 0.00 3.01
6567 7285 6.447084 TCCCTCTGTTCCCAAATATTAAGTCT 59.553 38.462 0.00 0.00 0.00 3.24
6568 7286 7.036863 TCCCTCTGTTCCCAAATATTAAGTCTT 60.037 37.037 0.00 0.00 0.00 3.01
6569 7287 7.615757 CCCTCTGTTCCCAAATATTAAGTCTTT 59.384 37.037 0.00 0.00 0.00 2.52
6570 7288 8.678199 CCTCTGTTCCCAAATATTAAGTCTTTC 58.322 37.037 0.00 0.00 0.00 2.62
6571 7289 9.454859 CTCTGTTCCCAAATATTAAGTCTTTCT 57.545 33.333 0.00 0.00 0.00 2.52
6588 7306 9.883142 AAGTCTTTCTAGAGATTCCAATAAGTG 57.117 33.333 0.00 0.00 0.00 3.16
6589 7307 9.261035 AGTCTTTCTAGAGATTCCAATAAGTGA 57.739 33.333 0.00 0.00 0.00 3.41
6590 7308 9.308318 GTCTTTCTAGAGATTCCAATAAGTGAC 57.692 37.037 0.00 0.00 0.00 3.67
6591 7309 9.261035 TCTTTCTAGAGATTCCAATAAGTGACT 57.739 33.333 0.00 0.00 0.00 3.41
6594 7312 9.475620 TTCTAGAGATTCCAATAAGTGACTACA 57.524 33.333 0.00 0.00 0.00 2.74
6595 7313 9.647918 TCTAGAGATTCCAATAAGTGACTACAT 57.352 33.333 0.00 0.00 0.00 2.29
6598 7316 9.201989 AGAGATTCCAATAAGTGACTACATACA 57.798 33.333 0.00 0.00 0.00 2.29
6599 7317 9.469807 GAGATTCCAATAAGTGACTACATACAG 57.530 37.037 0.00 0.00 0.00 2.74
6600 7318 9.201989 AGATTCCAATAAGTGACTACATACAGA 57.798 33.333 0.00 0.00 0.00 3.41
6601 7319 9.469807 GATTCCAATAAGTGACTACATACAGAG 57.530 37.037 0.00 0.00 0.00 3.35
6602 7320 6.806751 TCCAATAAGTGACTACATACAGAGC 58.193 40.000 0.00 0.00 0.00 4.09
6603 7321 6.379988 TCCAATAAGTGACTACATACAGAGCA 59.620 38.462 0.00 0.00 0.00 4.26
6604 7322 7.041721 CCAATAAGTGACTACATACAGAGCAA 58.958 38.462 0.00 0.00 0.00 3.91
6605 7323 7.549134 CCAATAAGTGACTACATACAGAGCAAA 59.451 37.037 0.00 0.00 0.00 3.68
6606 7324 8.935844 CAATAAGTGACTACATACAGAGCAAAA 58.064 33.333 0.00 0.00 0.00 2.44
6607 7325 9.672673 AATAAGTGACTACATACAGAGCAAAAT 57.327 29.630 0.00 0.00 0.00 1.82
6608 7326 6.974932 AGTGACTACATACAGAGCAAAATG 57.025 37.500 0.00 0.00 0.00 2.32
6609 7327 6.701340 AGTGACTACATACAGAGCAAAATGA 58.299 36.000 0.00 0.00 0.00 2.57
6610 7328 6.815641 AGTGACTACATACAGAGCAAAATGAG 59.184 38.462 0.00 0.00 0.00 2.90
6611 7329 6.591834 GTGACTACATACAGAGCAAAATGAGT 59.408 38.462 0.00 0.00 0.00 3.41
6612 7330 6.591448 TGACTACATACAGAGCAAAATGAGTG 59.409 38.462 0.00 0.00 0.00 3.51
6613 7331 6.701340 ACTACATACAGAGCAAAATGAGTGA 58.299 36.000 0.00 0.00 0.00 3.41
6614 7332 7.161404 ACTACATACAGAGCAAAATGAGTGAA 58.839 34.615 0.00 0.00 0.00 3.18
6615 7333 7.826252 ACTACATACAGAGCAAAATGAGTGAAT 59.174 33.333 0.00 0.00 0.00 2.57
6616 7334 7.081526 ACATACAGAGCAAAATGAGTGAATC 57.918 36.000 0.00 0.00 0.00 2.52
6617 7335 6.883217 ACATACAGAGCAAAATGAGTGAATCT 59.117 34.615 0.00 0.00 0.00 2.40
6618 7336 8.043113 ACATACAGAGCAAAATGAGTGAATCTA 58.957 33.333 0.00 0.00 0.00 1.98
6619 7337 6.734104 ACAGAGCAAAATGAGTGAATCTAC 57.266 37.500 0.00 0.00 0.00 2.59
6620 7338 6.233434 ACAGAGCAAAATGAGTGAATCTACA 58.767 36.000 0.00 0.00 0.00 2.74
6621 7339 6.370994 ACAGAGCAAAATGAGTGAATCTACAG 59.629 38.462 0.00 0.00 0.00 2.74
6622 7340 6.370994 CAGAGCAAAATGAGTGAATCTACAGT 59.629 38.462 0.00 0.00 0.00 3.55
6623 7341 6.593382 AGAGCAAAATGAGTGAATCTACAGTC 59.407 38.462 0.00 0.00 39.73 3.51
6624 7342 6.471146 AGCAAAATGAGTGAATCTACAGTCT 58.529 36.000 0.00 0.00 39.91 3.24
6625 7343 7.615403 AGCAAAATGAGTGAATCTACAGTCTA 58.385 34.615 0.00 0.00 39.91 2.59
6626 7344 8.097038 AGCAAAATGAGTGAATCTACAGTCTAA 58.903 33.333 0.00 0.00 39.91 2.10
6627 7345 8.721478 GCAAAATGAGTGAATCTACAGTCTAAA 58.279 33.333 0.00 0.00 39.91 1.85
6641 7359 9.529325 TCTACAGTCTAAAATATGTGTACATGC 57.471 33.333 7.73 0.00 37.15 4.06
6642 7360 9.313118 CTACAGTCTAAAATATGTGTACATGCA 57.687 33.333 7.73 0.00 37.15 3.96
6643 7361 8.737168 ACAGTCTAAAATATGTGTACATGCAT 57.263 30.769 7.73 1.14 37.15 3.96
6644 7362 8.830580 ACAGTCTAAAATATGTGTACATGCATC 58.169 33.333 7.73 0.00 37.15 3.91
6645 7363 8.285394 CAGTCTAAAATATGTGTACATGCATCC 58.715 37.037 7.73 0.00 37.15 3.51
6646 7364 7.171508 AGTCTAAAATATGTGTACATGCATCCG 59.828 37.037 7.73 0.00 37.15 4.18
6647 7365 6.989759 TCTAAAATATGTGTACATGCATCCGT 59.010 34.615 7.73 0.00 37.15 4.69
6648 7366 8.145122 TCTAAAATATGTGTACATGCATCCGTA 58.855 33.333 7.73 0.00 37.15 4.02
6649 7367 7.744087 AAAATATGTGTACATGCATCCGTAT 57.256 32.000 7.73 0.00 37.15 3.06
6650 7368 6.726258 AATATGTGTACATGCATCCGTATG 57.274 37.500 7.73 0.00 40.73 2.39
6652 7370 3.867857 TGTGTACATGCATCCGTATGTT 58.132 40.909 0.00 0.00 44.98 2.71
6653 7371 3.620821 TGTGTACATGCATCCGTATGTTG 59.379 43.478 0.00 0.00 44.98 3.33
6654 7372 3.621268 GTGTACATGCATCCGTATGTTGT 59.379 43.478 0.00 0.00 44.98 3.32
6655 7373 4.806775 GTGTACATGCATCCGTATGTTGTA 59.193 41.667 0.00 0.00 44.98 2.41
6656 7374 5.047188 TGTACATGCATCCGTATGTTGTAG 58.953 41.667 0.00 0.00 44.98 2.74
6657 7375 4.137116 ACATGCATCCGTATGTTGTAGT 57.863 40.909 0.00 0.00 44.98 2.73
6658 7376 4.119862 ACATGCATCCGTATGTTGTAGTC 58.880 43.478 0.00 0.00 44.98 2.59
6659 7377 3.173668 TGCATCCGTATGTTGTAGTCC 57.826 47.619 0.00 0.00 35.38 3.85
6660 7378 2.498078 TGCATCCGTATGTTGTAGTCCA 59.502 45.455 0.00 0.00 35.38 4.02
6661 7379 3.133901 TGCATCCGTATGTTGTAGTCCAT 59.866 43.478 0.00 0.00 35.38 3.41
6662 7380 4.127171 GCATCCGTATGTTGTAGTCCATT 58.873 43.478 0.00 0.00 35.38 3.16
6663 7381 4.574828 GCATCCGTATGTTGTAGTCCATTT 59.425 41.667 0.00 0.00 35.38 2.32
6664 7382 5.504010 GCATCCGTATGTTGTAGTCCATTTG 60.504 44.000 0.00 0.00 35.38 2.32
6665 7383 5.408880 TCCGTATGTTGTAGTCCATTTGA 57.591 39.130 0.00 0.00 0.00 2.69
6666 7384 5.795972 TCCGTATGTTGTAGTCCATTTGAA 58.204 37.500 0.00 0.00 0.00 2.69
6667 7385 6.231951 TCCGTATGTTGTAGTCCATTTGAAA 58.768 36.000 0.00 0.00 0.00 2.69
6668 7386 6.882140 TCCGTATGTTGTAGTCCATTTGAAAT 59.118 34.615 0.00 0.00 0.00 2.17
6669 7387 6.966632 CCGTATGTTGTAGTCCATTTGAAATG 59.033 38.462 10.84 10.84 0.00 2.32
6670 7388 7.361713 CCGTATGTTGTAGTCCATTTGAAATGT 60.362 37.037 15.93 1.43 0.00 2.71
6671 7389 7.692291 CGTATGTTGTAGTCCATTTGAAATGTC 59.308 37.037 15.93 9.10 0.00 3.06
6672 7390 7.765695 ATGTTGTAGTCCATTTGAAATGTCT 57.234 32.000 15.93 14.81 0.00 3.41
6673 7391 8.862325 ATGTTGTAGTCCATTTGAAATGTCTA 57.138 30.769 15.93 13.97 0.00 2.59
6674 7392 8.684386 TGTTGTAGTCCATTTGAAATGTCTAA 57.316 30.769 15.93 4.89 0.00 2.10
6675 7393 9.126151 TGTTGTAGTCCATTTGAAATGTCTAAA 57.874 29.630 15.93 10.39 0.00 1.85
6676 7394 9.959749 GTTGTAGTCCATTTGAAATGTCTAAAA 57.040 29.630 15.93 14.59 0.00 1.52
6681 7399 9.136323 AGTCCATTTGAAATGTCTAAAAAGACT 57.864 29.630 15.93 14.21 39.41 3.24
6682 7400 9.750125 GTCCATTTGAAATGTCTAAAAAGACTT 57.250 29.630 15.93 0.00 39.41 3.01
6699 7417 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
6700 7418 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
6701 7419 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
6702 7420 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
6710 7428 0.173708 GAACGGAGGGAGTACAGCTG 59.826 60.000 13.48 13.48 0.00 4.24
6765 7483 6.928979 TTCATTTACTCGAACCAAGTTTCA 57.071 33.333 0.00 0.00 0.00 2.69
6804 7522 4.694760 TGGAGGTAGTTCCATCATCATG 57.305 45.455 0.00 0.00 42.24 3.07
6806 7524 4.101585 TGGAGGTAGTTCCATCATCATGAC 59.898 45.833 0.00 0.00 42.24 3.06
6827 7545 5.048434 TGACGGAAATATGCAAACATGTGAA 60.048 36.000 0.00 0.00 37.04 3.18
7076 7837 3.653164 ACCCAACAGATCCCAAAAGTTT 58.347 40.909 0.00 0.00 0.00 2.66
7317 8081 0.983378 CGTTTCAGGATCCCCTCCCT 60.983 60.000 8.55 0.00 46.27 4.20
7351 8121 3.378427 ACAGACAGGCAGACTTGTTTTTC 59.622 43.478 0.00 0.00 0.00 2.29
7560 8334 1.879796 GCCATTATTCTCCCGCTCTGG 60.880 57.143 0.00 0.00 37.55 3.86
7572 8346 2.743928 CTCTGGGTTGCGGCAGTC 60.744 66.667 1.67 0.57 0.00 3.51
7680 8457 9.754382 TCTCTATACCGTTTGTATTTTGATACC 57.246 33.333 0.00 0.00 40.64 2.73
7681 8458 9.760077 CTCTATACCGTTTGTATTTTGATACCT 57.240 33.333 0.00 0.00 40.64 3.08
7689 8466 9.577110 CGTTTGTATTTTGATACCTAGTAGTGA 57.423 33.333 0.00 0.00 0.00 3.41
7701 8633 5.262804 ACCTAGTAGTGAGTAGAAGTTGGG 58.737 45.833 0.00 0.00 31.02 4.12
7712 8644 5.160386 AGTAGAAGTTGGGAAGGTAGGAAA 58.840 41.667 0.00 0.00 0.00 3.13
7715 8647 5.386060 AGAAGTTGGGAAGGTAGGAAAAAG 58.614 41.667 0.00 0.00 0.00 2.27
7731 8666 9.162764 GTAGGAAAAAGACAGCATTTATCTACA 57.837 33.333 0.00 0.00 31.63 2.74
7732 8667 8.635765 AGGAAAAAGACAGCATTTATCTACAA 57.364 30.769 0.00 0.00 0.00 2.41
7737 8672 9.515226 AAAAGACAGCATTTATCTACAAAGGTA 57.485 29.630 0.00 0.00 0.00 3.08
7738 8673 9.686683 AAAGACAGCATTTATCTACAAAGGTAT 57.313 29.630 0.00 0.00 0.00 2.73
7870 8851 2.963432 CCATTTTGGAAGCATGGTGTC 58.037 47.619 0.00 0.00 40.96 3.67
7871 8852 2.299582 CCATTTTGGAAGCATGGTGTCA 59.700 45.455 0.00 0.00 40.96 3.58
7881 8865 1.617850 GCATGGTGTCATTGTTGGGAA 59.382 47.619 0.00 0.00 0.00 3.97
7916 8904 2.811410 TGGATTTGGAGCAGCAAGAAT 58.189 42.857 0.00 0.00 0.00 2.40
7919 8907 1.999648 TTTGGAGCAGCAAGAATGGT 58.000 45.000 0.00 0.00 37.91 3.55
7928 8916 3.159213 AGCAAGAATGGTGATTGGTGA 57.841 42.857 0.00 0.00 35.55 4.02
8005 8997 3.273080 CTTGCTTGGACGCTTGCCC 62.273 63.158 0.00 0.00 0.00 5.36
8036 9033 2.677979 GCCGGAAGCCACTTTCGTC 61.678 63.158 5.05 0.00 40.49 4.20
8060 9057 1.219124 TCCGCTGAGGATGTTCTGC 59.781 57.895 0.00 0.00 45.98 4.26
8061 9058 1.220206 CCGCTGAGGATGTTCTGCT 59.780 57.895 0.00 0.00 45.00 4.24
8083 9080 1.679977 ATGTGCACACCCATCCAGC 60.680 57.895 24.37 0.00 0.00 4.85
8143 9140 6.293353 CCAGCACTGTTTTTGTTTTTGTTTCT 60.293 34.615 0.00 0.00 0.00 2.52
8173 9170 0.036105 TCTACTCTACGTGGACGGCA 60.036 55.000 0.00 0.00 44.95 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 0.462759 CCCGATGTTCTCCTCCTTGC 60.463 60.000 0.00 0.00 0.00 4.01
32 33 0.909610 TGCCCGATGTTCTCCTCCTT 60.910 55.000 0.00 0.00 0.00 3.36
47 48 2.288518 CGTAGGAGAATAAGAGCTGCCC 60.289 54.545 0.00 0.00 0.00 5.36
52 53 3.130693 ACCACACGTAGGAGAATAAGAGC 59.869 47.826 12.70 0.00 0.00 4.09
66 67 4.457949 AGAAGAACTTTTGAAACCACACGT 59.542 37.500 0.00 0.00 0.00 4.49
69 70 4.401202 GGGAGAAGAACTTTTGAAACCACA 59.599 41.667 0.00 0.00 0.00 4.17
73 74 4.645136 ACCAGGGAGAAGAACTTTTGAAAC 59.355 41.667 0.00 0.00 0.00 2.78
83 84 3.100671 GAGCTAAGACCAGGGAGAAGAA 58.899 50.000 0.00 0.00 0.00 2.52
85 86 2.745968 AGAGCTAAGACCAGGGAGAAG 58.254 52.381 0.00 0.00 0.00 2.85
93 94 4.890158 TGTCAATGAAGAGCTAAGACCA 57.110 40.909 0.00 0.00 0.00 4.02
94 95 4.034975 GCATGTCAATGAAGAGCTAAGACC 59.965 45.833 0.00 0.00 35.67 3.85
98 99 4.201980 GCATGCATGTCAATGAAGAGCTAA 60.202 41.667 26.79 0.00 35.67 3.09
102 103 2.688446 AGGCATGCATGTCAATGAAGAG 59.312 45.455 31.47 0.83 35.67 2.85
132 133 4.081030 CAGAGCAGCGCAACCACG 62.081 66.667 11.47 0.00 0.00 4.94
165 528 4.929707 GAATACCCTGGCGCCCCG 62.930 72.222 26.77 15.31 0.00 5.73
166 529 4.581093 GGAATACCCTGGCGCCCC 62.581 72.222 26.77 11.58 0.00 5.80
167 530 3.133365 ATGGAATACCCTGGCGCCC 62.133 63.158 26.77 6.44 35.38 6.13
169 532 1.148273 TCATGGAATACCCTGGCGC 59.852 57.895 0.00 0.00 33.58 6.53
173 536 2.643551 GTGGTGTCATGGAATACCCTG 58.356 52.381 0.00 0.00 35.38 4.45
182 545 1.079197 TAGCAGCGTGGTGTCATGG 60.079 57.895 0.64 0.00 0.00 3.66
185 548 1.006220 CAGTAGCAGCGTGGTGTCA 60.006 57.895 0.64 0.00 0.00 3.58
190 553 1.598183 CGACTATCAGTAGCAGCGTGG 60.598 57.143 0.00 0.00 0.00 4.94
192 555 1.331138 GACGACTATCAGTAGCAGCGT 59.669 52.381 0.00 0.00 36.71 5.07
195 558 1.600013 AGCGACGACTATCAGTAGCAG 59.400 52.381 0.00 0.00 40.59 4.24
213 577 4.908156 GCATCAACATCAAATATCGTGAGC 59.092 41.667 0.00 0.00 0.00 4.26
220 584 5.070823 AGGAGGGCATCAACATCAAATAT 57.929 39.130 0.08 0.00 0.00 1.28
231 595 1.000359 TCGTCAGAGGAGGGCATCA 60.000 57.895 0.08 0.00 0.00 3.07
244 608 1.006220 ACGAGCAGCATTGTCGTCA 60.006 52.632 1.74 0.00 43.19 4.35
247 611 2.097160 GCACGAGCAGCATTGTCG 59.903 61.111 0.00 0.00 41.58 4.35
250 614 1.714414 GAGAGCACGAGCAGCATTG 59.286 57.895 7.77 0.00 45.49 2.82
252 616 2.014064 ATCGAGAGCACGAGCAGCAT 62.014 55.000 7.77 0.00 45.22 3.79
256 620 1.095600 AAGTATCGAGAGCACGAGCA 58.904 50.000 7.77 0.00 45.22 4.26
269 633 7.649306 GCATGTTGAATTATGAACCCAAGTATC 59.351 37.037 0.00 0.00 0.00 2.24
272 636 5.245751 TGCATGTTGAATTATGAACCCAAGT 59.754 36.000 0.00 0.00 0.00 3.16
273 637 5.722263 TGCATGTTGAATTATGAACCCAAG 58.278 37.500 0.00 0.00 0.00 3.61
283 647 5.019470 TGGTAACCCATGCATGTTGAATTA 58.981 37.500 24.58 12.18 35.17 1.40
284 648 3.837146 TGGTAACCCATGCATGTTGAATT 59.163 39.130 24.58 13.06 35.17 2.17
285 649 3.439154 TGGTAACCCATGCATGTTGAAT 58.561 40.909 24.58 12.10 35.17 2.57
286 650 2.881734 TGGTAACCCATGCATGTTGAA 58.118 42.857 24.58 5.51 35.17 2.69
287 651 2.593925 TGGTAACCCATGCATGTTGA 57.406 45.000 24.58 2.21 35.17 3.18
288 652 2.824936 TCTTGGTAACCCATGCATGTTG 59.175 45.455 24.58 17.26 41.49 3.33
289 653 3.091545 CTCTTGGTAACCCATGCATGTT 58.908 45.455 24.58 15.66 41.49 2.71
290 654 2.308570 TCTCTTGGTAACCCATGCATGT 59.691 45.455 24.58 9.62 41.49 3.21
291 655 2.947652 CTCTCTTGGTAACCCATGCATG 59.052 50.000 20.19 20.19 41.49 4.06
292 656 2.578021 ACTCTCTTGGTAACCCATGCAT 59.422 45.455 0.00 0.00 41.49 3.96
293 657 1.985159 ACTCTCTTGGTAACCCATGCA 59.015 47.619 0.00 0.00 41.49 3.96
294 658 2.789409 ACTCTCTTGGTAACCCATGC 57.211 50.000 0.00 0.00 41.49 4.06
295 659 5.187967 AGAAGTACTCTCTTGGTAACCCATG 59.812 44.000 0.00 0.00 41.49 3.66
296 660 5.342866 AGAAGTACTCTCTTGGTAACCCAT 58.657 41.667 0.00 0.00 41.49 4.00
297 661 4.748701 AGAAGTACTCTCTTGGTAACCCA 58.251 43.478 0.00 0.00 39.65 4.51
298 662 5.951148 ACTAGAAGTACTCTCTTGGTAACCC 59.049 44.000 11.25 0.00 35.41 4.11
299 663 7.394077 AGAACTAGAAGTACTCTCTTGGTAACC 59.606 40.741 11.25 0.00 35.41 2.85
300 664 8.339344 AGAACTAGAAGTACTCTCTTGGTAAC 57.661 38.462 11.25 9.23 35.41 2.50
301 665 9.669887 CTAGAACTAGAAGTACTCTCTTGGTAA 57.330 37.037 11.25 2.90 35.41 2.85
302 666 8.824783 ACTAGAACTAGAAGTACTCTCTTGGTA 58.175 37.037 14.64 5.10 36.97 3.25
303 667 7.608761 CACTAGAACTAGAAGTACTCTCTTGGT 59.391 40.741 14.64 8.92 36.97 3.67
304 668 7.414762 GCACTAGAACTAGAAGTACTCTCTTGG 60.415 44.444 14.64 8.46 36.97 3.61
305 669 7.335924 AGCACTAGAACTAGAAGTACTCTCTTG 59.664 40.741 14.64 11.52 36.97 3.02
306 670 7.399634 AGCACTAGAACTAGAAGTACTCTCTT 58.600 38.462 14.64 0.00 36.97 2.85
307 671 6.954232 AGCACTAGAACTAGAAGTACTCTCT 58.046 40.000 14.64 4.43 36.97 3.10
308 672 7.619964 AAGCACTAGAACTAGAAGTACTCTC 57.380 40.000 14.64 0.00 36.97 3.20
309 673 7.148373 CGAAAGCACTAGAACTAGAAGTACTCT 60.148 40.741 14.64 0.00 36.97 3.24
310 674 6.962678 CGAAAGCACTAGAACTAGAAGTACTC 59.037 42.308 14.64 0.00 36.97 2.59
388 951 2.587889 CGAAATGTAGCCCGGGGT 59.412 61.111 31.04 31.04 0.00 4.95
392 955 0.732571 ATGTTGCGAAATGTAGCCCG 59.267 50.000 0.00 0.00 0.00 6.13
409 972 4.808414 TCTCAACTCACAACCTAGGATG 57.192 45.455 17.98 17.44 0.00 3.51
417 980 1.795286 CGCCTCTTCTCAACTCACAAC 59.205 52.381 0.00 0.00 0.00 3.32
421 984 1.080501 CGCGCCTCTTCTCAACTCA 60.081 57.895 0.00 0.00 0.00 3.41
422 985 1.807573 CCGCGCCTCTTCTCAACTC 60.808 63.158 0.00 0.00 0.00 3.01
427 990 1.153549 ATTGACCGCGCCTCTTCTC 60.154 57.895 0.00 0.00 0.00 2.87
449 1012 5.624738 CGTTCTATATATGGAAGACAGGCCC 60.625 48.000 11.45 0.00 0.00 5.80
451 1014 6.094061 GTCGTTCTATATATGGAAGACAGGC 58.906 44.000 22.13 11.30 31.97 4.85
452 1015 6.208797 TGGTCGTTCTATATATGGAAGACAGG 59.791 42.308 24.99 10.46 32.58 4.00
454 1017 7.591421 TTGGTCGTTCTATATATGGAAGACA 57.409 36.000 24.99 15.44 32.58 3.41
455 1018 8.762426 GTTTTGGTCGTTCTATATATGGAAGAC 58.238 37.037 20.57 20.57 31.45 3.01
456 1019 8.479689 TGTTTTGGTCGTTCTATATATGGAAGA 58.520 33.333 11.45 8.70 0.00 2.87
458 1021 9.451002 TTTGTTTTGGTCGTTCTATATATGGAA 57.549 29.630 7.39 7.39 0.00 3.53
460 1023 8.670135 TGTTTGTTTTGGTCGTTCTATATATGG 58.330 33.333 0.00 0.00 0.00 2.74
466 1029 9.620660 GAATTATGTTTGTTTTGGTCGTTCTAT 57.379 29.630 0.00 0.00 0.00 1.98
467 1030 8.622157 TGAATTATGTTTGTTTTGGTCGTTCTA 58.378 29.630 0.00 0.00 0.00 2.10
468 1031 7.484975 TGAATTATGTTTGTTTTGGTCGTTCT 58.515 30.769 0.00 0.00 0.00 3.01
469 1032 7.687005 TGAATTATGTTTGTTTTGGTCGTTC 57.313 32.000 0.00 0.00 0.00 3.95
476 1041 9.733219 AATTTGGCTTGAATTATGTTTGTTTTG 57.267 25.926 0.00 0.00 0.00 2.44
485 1050 5.051508 GCGCACTAATTTGGCTTGAATTATG 60.052 40.000 0.30 0.00 30.88 1.90
487 1052 4.082517 TGCGCACTAATTTGGCTTGAATTA 60.083 37.500 5.66 0.00 0.00 1.40
490 1055 1.611006 TGCGCACTAATTTGGCTTGAA 59.389 42.857 5.66 0.00 0.00 2.69
491 1056 1.242989 TGCGCACTAATTTGGCTTGA 58.757 45.000 5.66 0.00 0.00 3.02
492 1057 1.720852 GTTGCGCACTAATTTGGCTTG 59.279 47.619 11.12 0.00 0.00 4.01
493 1058 1.336795 GGTTGCGCACTAATTTGGCTT 60.337 47.619 11.12 0.00 0.00 4.35
494 1059 0.243636 GGTTGCGCACTAATTTGGCT 59.756 50.000 11.12 0.00 0.00 4.75
496 1061 0.455972 CCGGTTGCGCACTAATTTGG 60.456 55.000 11.12 1.05 0.00 3.28
497 1062 0.519519 TCCGGTTGCGCACTAATTTG 59.480 50.000 11.12 0.00 0.00 2.32
501 1066 1.669760 CCTTCCGGTTGCGCACTAA 60.670 57.895 11.12 0.00 0.00 2.24
502 1067 2.047655 CCTTCCGGTTGCGCACTA 60.048 61.111 11.12 0.00 0.00 2.74
504 1069 3.423154 CTCCTTCCGGTTGCGCAC 61.423 66.667 11.12 5.37 0.00 5.34
506 1071 4.699522 ACCTCCTTCCGGTTGCGC 62.700 66.667 0.00 0.00 0.00 6.09
508 1073 1.524008 CCAAACCTCCTTCCGGTTGC 61.524 60.000 0.00 0.00 43.66 4.17
509 1074 1.524008 GCCAAACCTCCTTCCGGTTG 61.524 60.000 0.00 0.00 43.66 3.77
511 1076 1.789576 ATGCCAAACCTCCTTCCGGT 61.790 55.000 0.00 0.00 35.97 5.28
513 1078 0.322456 TCATGCCAAACCTCCTTCCG 60.322 55.000 0.00 0.00 0.00 4.30
514 1079 1.923356 TTCATGCCAAACCTCCTTCC 58.077 50.000 0.00 0.00 0.00 3.46
515 1080 3.511146 TGAATTCATGCCAAACCTCCTTC 59.489 43.478 3.38 0.00 0.00 3.46
516 1081 3.509442 TGAATTCATGCCAAACCTCCTT 58.491 40.909 3.38 0.00 0.00 3.36
518 1083 3.259123 AGTTGAATTCATGCCAAACCTCC 59.741 43.478 9.40 0.00 0.00 4.30
519 1084 4.525912 AGTTGAATTCATGCCAAACCTC 57.474 40.909 9.40 0.00 0.00 3.85
520 1085 4.961438 AAGTTGAATTCATGCCAAACCT 57.039 36.364 9.40 0.00 0.00 3.50
521 1086 6.375945 AAAAAGTTGAATTCATGCCAAACC 57.624 33.333 9.40 0.00 0.00 3.27
566 1131 4.865365 TCGTTTGCCTTTGTTTCGAAAAAT 59.135 33.333 13.10 0.00 0.00 1.82
810 1410 3.466791 ATCCCCTCTTGATGGCGCG 62.467 63.158 0.00 0.00 0.00 6.86
811 1411 1.895707 CATCCCCTCTTGATGGCGC 60.896 63.158 0.00 0.00 36.74 6.53
812 1412 0.181114 TTCATCCCCTCTTGATGGCG 59.819 55.000 0.00 0.00 40.02 5.69
813 1413 2.442236 TTTCATCCCCTCTTGATGGC 57.558 50.000 0.00 0.00 40.02 4.40
814 1414 6.309357 TCATATTTTCATCCCCTCTTGATGG 58.691 40.000 0.00 0.00 40.02 3.51
882 1482 4.168291 GCTTCCTGGAGCCCCGAG 62.168 72.222 0.00 0.00 36.66 4.63
1271 1897 1.064060 CAATTCGACAAATCTCCCCGC 59.936 52.381 0.00 0.00 0.00 6.13
1273 1899 2.024414 CCCAATTCGACAAATCTCCCC 58.976 52.381 0.00 0.00 0.00 4.81
1282 1908 2.587322 CTAGGCCGCCCAATTCGACA 62.587 60.000 5.55 0.00 0.00 4.35
1300 1926 2.231380 ACCATCGGAGGCCCAAACT 61.231 57.895 0.00 0.00 0.00 2.66
1308 1934 0.390860 GATCCAGACACCATCGGAGG 59.609 60.000 0.00 0.00 34.75 4.30
1309 1935 0.031314 CGATCCAGACACCATCGGAG 59.969 60.000 0.00 0.00 36.58 4.63
1522 2166 4.449743 GCAACACGATCCAGTAAACAGTAA 59.550 41.667 0.00 0.00 0.00 2.24
1528 2172 3.818210 ACAATGCAACACGATCCAGTAAA 59.182 39.130 0.00 0.00 0.00 2.01
1531 2175 1.806542 GACAATGCAACACGATCCAGT 59.193 47.619 0.00 0.00 0.00 4.00
1532 2176 2.079158 AGACAATGCAACACGATCCAG 58.921 47.619 0.00 0.00 0.00 3.86
1535 2179 2.159653 GGTGAGACAATGCAACACGATC 60.160 50.000 0.00 0.00 33.08 3.69
1565 2209 1.620819 TCCAGAGACCTGAAAGAGCAC 59.379 52.381 0.00 0.00 43.02 4.40
1663 2307 1.269831 CCCTCGAGACGGATGATTTCC 60.270 57.143 15.71 0.00 41.59 3.13
1707 2351 1.876263 GCAAAACCGCGCTGTGTTT 60.876 52.632 4.86 9.35 36.29 2.83
1709 2353 4.264638 GGCAAAACCGCGCTGTGT 62.265 61.111 4.86 0.00 0.00 3.72
1712 2356 3.659092 TGAGGCAAAACCGCGCTG 61.659 61.111 5.56 0.00 46.52 5.18
1719 2363 6.073602 GGAGAAAATTCAATGTGAGGCAAAAC 60.074 38.462 0.00 0.00 0.00 2.43
1736 2388 2.107552 TGGACGTCTTTGGGGAGAAAAT 59.892 45.455 16.46 0.00 0.00 1.82
1745 2397 8.293867 TGAAATTTTAGTTATGGACGTCTTTGG 58.706 33.333 16.46 0.00 0.00 3.28
1748 2400 9.449719 AGATGAAATTTTAGTTATGGACGTCTT 57.550 29.630 16.46 6.15 0.00 3.01
1749 2401 8.883731 CAGATGAAATTTTAGTTATGGACGTCT 58.116 33.333 16.46 0.00 0.00 4.18
1765 2417 7.559486 TGCATACAGTAGAGACAGATGAAATT 58.441 34.615 0.00 0.00 0.00 1.82
1855 2520 3.565482 AGTGCACATCAAAATCAGTTCGT 59.435 39.130 21.04 0.00 0.00 3.85
1872 2537 3.608316 AAAGTTGGCTTTTGAAGTGCA 57.392 38.095 0.00 0.00 41.78 4.57
1904 2570 4.047285 CCCAGCCATGGCGTGTTAAAAT 62.047 50.000 30.50 7.34 46.19 1.82
2019 2685 3.495001 GGAAGCTCACGGTAAGCATAATC 59.505 47.826 5.98 0.00 42.35 1.75
2108 2774 2.099263 ACGTGGAATGTAGACATCTCCG 59.901 50.000 14.05 9.29 36.85 4.63
2226 2893 2.036475 AGTAGAGGCATGCTAACATCGG 59.964 50.000 18.92 0.00 32.87 4.18
2330 2997 1.072806 AGATCCTGCAAACTCACAGCA 59.927 47.619 0.00 0.00 36.72 4.41
2416 3083 9.494271 GGATGCATATAGAAGTTAACAAGATGA 57.506 33.333 8.61 0.00 0.00 2.92
2453 3120 2.092211 GTGTTCTCAAATACGGTCTGCG 59.908 50.000 0.00 0.00 0.00 5.18
2604 3279 5.504994 GCAACAGGTCGTCAAATGAAGTTAA 60.505 40.000 0.00 0.00 0.00 2.01
2654 3329 1.909700 TGATGCCCTGAAACTCCAAC 58.090 50.000 0.00 0.00 0.00 3.77
2720 3395 9.363401 AGATGTGAAATCATGACATATCCAAAT 57.637 29.630 14.16 2.79 34.38 2.32
2854 3529 6.426937 GGACATTGTTTTGAGTAGCTAGTTCA 59.573 38.462 1.78 3.20 0.00 3.18
2857 3532 6.115448 AGGACATTGTTTTGAGTAGCTAGT 57.885 37.500 0.00 0.00 0.00 2.57
2904 3579 8.043836 CGCATTTGACAAATAAATATTGACACG 58.956 33.333 12.98 0.00 33.45 4.49
2936 3611 4.458989 GCACAGGAAACATCACTTCCAATA 59.541 41.667 4.53 0.00 44.19 1.90
3039 3714 4.517285 GAATAGCACATGTTCCTCCAAGA 58.483 43.478 0.00 0.00 0.00 3.02
3116 3791 3.411446 CAACAAGAGGTGAATAGCCACA 58.589 45.455 0.00 0.00 38.74 4.17
3294 3971 2.102578 GTCAATTGGGGGAAGTCCATG 58.897 52.381 5.42 0.00 37.91 3.66
3306 3983 2.030007 AGGCAACGTCATTGTCAATTGG 60.030 45.455 5.42 0.00 46.04 3.16
3436 4116 9.023962 ACTAGGATGCAAATAGAAAAACATCAA 57.976 29.630 9.45 0.00 36.49 2.57
3437 4117 8.579850 ACTAGGATGCAAATAGAAAAACATCA 57.420 30.769 9.45 0.00 36.49 3.07
3621 4301 7.521748 GCCAGTATCTACAATCGTACATACAGT 60.522 40.741 0.00 0.00 33.96 3.55
3658 4338 2.092323 GTACCATGAAGCCCCAGAAAC 58.908 52.381 0.00 0.00 0.00 2.78
3694 4374 6.851609 TGCTGCTTGTACACTTTTTATATGG 58.148 36.000 0.00 0.00 0.00 2.74
3710 4390 3.323115 TCTCTACCTATGGATGCTGCTTG 59.677 47.826 0.00 0.00 0.00 4.01
3898 4582 1.866483 ATGCTGGATCACTTGGGCCA 61.866 55.000 0.00 0.00 0.00 5.36
3903 4587 3.603532 ACTGTACATGCTGGATCACTTG 58.396 45.455 0.00 0.00 0.00 3.16
3993 4677 8.112822 TGGAATAGAGGGAAAAACACATGATTA 58.887 33.333 0.00 0.00 0.00 1.75
4005 4689 5.734140 TGGTAATTCCTGGAATAGAGGGAAA 59.266 40.000 21.62 1.28 40.57 3.13
4148 4834 9.859427 TCACAAAAATGGCAATAAATCTAGAAG 57.141 29.630 0.00 0.00 0.00 2.85
4149 4835 9.638239 GTCACAAAAATGGCAATAAATCTAGAA 57.362 29.630 0.00 0.00 0.00 2.10
4151 4837 9.643693 AAGTCACAAAAATGGCAATAAATCTAG 57.356 29.630 0.00 0.00 0.00 2.43
4186 4887 2.926200 GCACCAGAGCATATATACAGCG 59.074 50.000 4.00 0.00 0.00 5.18
4284 4987 9.566432 GTTCTAATCATAATCCTGGTTCAAGAT 57.434 33.333 0.00 0.00 0.00 2.40
4455 5158 9.265901 GCAGTAAGTATTTCATGTATGATGAGT 57.734 33.333 0.00 0.00 36.56 3.41
4456 5159 9.486497 AGCAGTAAGTATTTCATGTATGATGAG 57.514 33.333 0.00 0.00 36.56 2.90
4536 5239 7.094975 GCCAGTAAACTGTAATCAACACATGTA 60.095 37.037 9.17 0.00 42.27 2.29
4542 5245 8.574251 AATATGCCAGTAAACTGTAATCAACA 57.426 30.769 9.17 0.00 42.27 3.33
4851 5554 8.402472 CCGATAGTAACAAAGCAATGGAAATTA 58.598 33.333 0.00 0.00 0.00 1.40
4876 5579 7.436376 GCAATTCAGAGCAGAAAATTAATACCC 59.564 37.037 0.00 0.00 0.00 3.69
5056 5759 1.066858 CCTACAGTGCAGACGATGGTT 60.067 52.381 0.00 0.00 0.00 3.67
5102 5805 2.107950 TGTCAATAAAGCCAGGGTCG 57.892 50.000 0.00 0.00 0.00 4.79
5105 5808 3.889815 TCTCATGTCAATAAAGCCAGGG 58.110 45.455 0.00 0.00 0.00 4.45
5205 5908 4.925646 GGAATGAATCCTCAGCAACAAAAC 59.074 41.667 0.00 0.00 45.56 2.43
5545 6249 0.877743 GAAGCTTGGCTGTCTCCAAC 59.122 55.000 2.10 0.00 40.92 3.77
5794 6499 6.874288 ATCTAAGCTTTAGCATTTAGGCAG 57.126 37.500 3.20 0.00 45.16 4.85
5803 6508 5.009510 TGTTTGTGCAATCTAAGCTTTAGCA 59.990 36.000 3.20 5.58 45.16 3.49
5833 6538 5.767816 ACATACTTCCAAGTTCAAACACC 57.232 39.130 0.00 0.00 40.37 4.16
5834 6539 8.324163 AGATACATACTTCCAAGTTCAAACAC 57.676 34.615 0.00 0.00 40.37 3.32
6053 6758 1.256812 GCTGCTACACAATTGGGGTT 58.743 50.000 13.35 0.00 0.00 4.11
6062 6767 2.048222 GGCGTCTGCTGCTACACA 60.048 61.111 0.00 0.00 42.25 3.72
6078 6783 0.249573 CTGGGCTTTTGTGCAACTGG 60.250 55.000 0.00 0.00 38.04 4.00
6088 6793 0.471780 CCCCTTTGACCTGGGCTTTT 60.472 55.000 0.00 0.00 42.03 2.27
6127 6832 7.866729 TGACTGAATGCTTTGTCGTTATTTAA 58.133 30.769 0.00 0.00 32.64 1.52
6230 6935 1.884464 CACAGCGCTGACACAGTGT 60.884 57.895 42.03 16.81 43.09 3.55
6243 6948 3.720193 CTGTCACAGCGGCACAGC 61.720 66.667 1.45 0.00 31.62 4.40
6356 7062 4.072131 ACGATTAAACCTCATGCTTGTGT 58.928 39.130 0.00 0.00 0.00 3.72
6500 7215 9.492973 CATTCTTTTTCCATAAACATCCAAGTT 57.507 29.630 0.00 0.00 0.00 2.66
6542 7260 6.447084 AGACTTAATATTTGGGAACAGAGGGA 59.553 38.462 0.00 0.00 44.54 4.20
6543 7261 6.663734 AGACTTAATATTTGGGAACAGAGGG 58.336 40.000 0.00 0.00 44.54 4.30
6545 7263 9.454859 AGAAAGACTTAATATTTGGGAACAGAG 57.545 33.333 0.00 0.00 44.54 3.35
6562 7280 9.883142 CACTTATTGGAATCTCTAGAAAGACTT 57.117 33.333 0.00 0.00 0.00 3.01
6563 7281 9.261035 TCACTTATTGGAATCTCTAGAAAGACT 57.739 33.333 0.00 0.00 0.00 3.24
6564 7282 9.308318 GTCACTTATTGGAATCTCTAGAAAGAC 57.692 37.037 0.00 0.00 0.00 3.01
6565 7283 9.261035 AGTCACTTATTGGAATCTCTAGAAAGA 57.739 33.333 0.00 0.00 0.00 2.52
6568 7286 9.475620 TGTAGTCACTTATTGGAATCTCTAGAA 57.524 33.333 0.00 0.00 0.00 2.10
6569 7287 9.647918 ATGTAGTCACTTATTGGAATCTCTAGA 57.352 33.333 0.00 0.00 0.00 2.43
6572 7290 9.201989 TGTATGTAGTCACTTATTGGAATCTCT 57.798 33.333 0.00 0.00 0.00 3.10
6573 7291 9.469807 CTGTATGTAGTCACTTATTGGAATCTC 57.530 37.037 0.00 0.00 0.00 2.75
6574 7292 9.201989 TCTGTATGTAGTCACTTATTGGAATCT 57.798 33.333 0.00 0.00 0.00 2.40
6575 7293 9.469807 CTCTGTATGTAGTCACTTATTGGAATC 57.530 37.037 0.00 0.00 0.00 2.52
6576 7294 7.928706 GCTCTGTATGTAGTCACTTATTGGAAT 59.071 37.037 0.00 0.00 0.00 3.01
6577 7295 7.093509 TGCTCTGTATGTAGTCACTTATTGGAA 60.094 37.037 0.00 0.00 0.00 3.53
6578 7296 6.379988 TGCTCTGTATGTAGTCACTTATTGGA 59.620 38.462 0.00 0.00 0.00 3.53
6579 7297 6.573434 TGCTCTGTATGTAGTCACTTATTGG 58.427 40.000 0.00 0.00 0.00 3.16
6580 7298 8.479313 TTTGCTCTGTATGTAGTCACTTATTG 57.521 34.615 0.00 0.00 0.00 1.90
6581 7299 9.672673 ATTTTGCTCTGTATGTAGTCACTTATT 57.327 29.630 0.00 0.00 0.00 1.40
6582 7300 9.102757 CATTTTGCTCTGTATGTAGTCACTTAT 57.897 33.333 0.00 0.00 0.00 1.73
6583 7301 8.311109 TCATTTTGCTCTGTATGTAGTCACTTA 58.689 33.333 0.00 0.00 0.00 2.24
6584 7302 7.161404 TCATTTTGCTCTGTATGTAGTCACTT 58.839 34.615 0.00 0.00 0.00 3.16
6585 7303 6.701340 TCATTTTGCTCTGTATGTAGTCACT 58.299 36.000 0.00 0.00 0.00 3.41
6586 7304 6.591834 ACTCATTTTGCTCTGTATGTAGTCAC 59.408 38.462 0.00 0.00 0.00 3.67
6587 7305 6.591448 CACTCATTTTGCTCTGTATGTAGTCA 59.409 38.462 0.00 0.00 0.00 3.41
6588 7306 6.813649 TCACTCATTTTGCTCTGTATGTAGTC 59.186 38.462 0.00 0.00 0.00 2.59
6589 7307 6.701340 TCACTCATTTTGCTCTGTATGTAGT 58.299 36.000 0.00 0.00 0.00 2.73
6590 7308 7.601073 TTCACTCATTTTGCTCTGTATGTAG 57.399 36.000 0.00 0.00 0.00 2.74
6591 7309 8.043113 AGATTCACTCATTTTGCTCTGTATGTA 58.957 33.333 0.00 0.00 0.00 2.29
6592 7310 6.883217 AGATTCACTCATTTTGCTCTGTATGT 59.117 34.615 0.00 0.00 0.00 2.29
6593 7311 7.317842 AGATTCACTCATTTTGCTCTGTATG 57.682 36.000 0.00 0.00 0.00 2.39
6594 7312 8.043113 TGTAGATTCACTCATTTTGCTCTGTAT 58.957 33.333 0.00 0.00 0.00 2.29
6595 7313 7.386059 TGTAGATTCACTCATTTTGCTCTGTA 58.614 34.615 0.00 0.00 0.00 2.74
6596 7314 6.233434 TGTAGATTCACTCATTTTGCTCTGT 58.767 36.000 0.00 0.00 0.00 3.41
6597 7315 6.370994 ACTGTAGATTCACTCATTTTGCTCTG 59.629 38.462 0.00 0.00 0.00 3.35
6598 7316 6.471146 ACTGTAGATTCACTCATTTTGCTCT 58.529 36.000 0.00 0.00 0.00 4.09
6599 7317 6.593382 AGACTGTAGATTCACTCATTTTGCTC 59.407 38.462 0.00 0.00 0.00 4.26
6600 7318 6.471146 AGACTGTAGATTCACTCATTTTGCT 58.529 36.000 0.00 0.00 0.00 3.91
6601 7319 6.734104 AGACTGTAGATTCACTCATTTTGC 57.266 37.500 0.00 0.00 0.00 3.68
6615 7333 9.529325 GCATGTACACATATTTTAGACTGTAGA 57.471 33.333 0.00 0.00 34.26 2.59
6616 7334 9.313118 TGCATGTACACATATTTTAGACTGTAG 57.687 33.333 0.00 0.00 34.26 2.74
6617 7335 9.830975 ATGCATGTACACATATTTTAGACTGTA 57.169 29.630 0.00 0.00 34.26 2.74
6618 7336 8.737168 ATGCATGTACACATATTTTAGACTGT 57.263 30.769 0.00 0.00 34.26 3.55
6619 7337 8.285394 GGATGCATGTACACATATTTTAGACTG 58.715 37.037 2.46 0.00 34.26 3.51
6620 7338 7.171508 CGGATGCATGTACACATATTTTAGACT 59.828 37.037 2.46 0.00 34.26 3.24
6621 7339 7.042051 ACGGATGCATGTACACATATTTTAGAC 60.042 37.037 2.46 0.00 34.26 2.59
6622 7340 6.989759 ACGGATGCATGTACACATATTTTAGA 59.010 34.615 2.46 0.00 34.26 2.10
6623 7341 7.189693 ACGGATGCATGTACACATATTTTAG 57.810 36.000 2.46 0.00 34.26 1.85
6624 7342 8.716909 CATACGGATGCATGTACACATATTTTA 58.283 33.333 2.46 0.00 34.26 1.52
6625 7343 7.228507 ACATACGGATGCATGTACACATATTTT 59.771 33.333 7.78 0.00 36.43 1.82
6626 7344 6.710295 ACATACGGATGCATGTACACATATTT 59.290 34.615 7.78 0.00 36.43 1.40
6627 7345 6.230472 ACATACGGATGCATGTACACATATT 58.770 36.000 7.78 0.00 36.43 1.28
6628 7346 5.793817 ACATACGGATGCATGTACACATAT 58.206 37.500 7.78 0.00 36.43 1.78
6629 7347 5.208463 ACATACGGATGCATGTACACATA 57.792 39.130 7.78 0.00 36.43 2.29
6630 7348 4.071961 ACATACGGATGCATGTACACAT 57.928 40.909 7.78 0.00 36.43 3.21
6631 7349 3.535280 ACATACGGATGCATGTACACA 57.465 42.857 7.78 0.00 36.43 3.72
6632 7350 3.621268 ACAACATACGGATGCATGTACAC 59.379 43.478 15.89 0.00 35.66 2.90
6633 7351 3.867857 ACAACATACGGATGCATGTACA 58.132 40.909 15.89 0.00 35.66 2.90
6634 7352 5.047847 ACTACAACATACGGATGCATGTAC 58.952 41.667 18.21 0.00 37.51 2.90
6635 7353 5.270893 ACTACAACATACGGATGCATGTA 57.729 39.130 19.97 19.97 37.51 2.29
6636 7354 4.119862 GACTACAACATACGGATGCATGT 58.880 43.478 19.89 19.89 38.92 3.21
6637 7355 3.494626 GGACTACAACATACGGATGCATG 59.505 47.826 7.78 9.99 36.43 4.06
6638 7356 3.133901 TGGACTACAACATACGGATGCAT 59.866 43.478 7.78 0.00 36.43 3.96
6639 7357 2.498078 TGGACTACAACATACGGATGCA 59.502 45.455 7.78 0.00 36.43 3.96
6640 7358 3.173668 TGGACTACAACATACGGATGC 57.826 47.619 7.78 0.00 36.43 3.91
6641 7359 5.815222 TCAAATGGACTACAACATACGGATG 59.185 40.000 5.94 5.94 39.16 3.51
6642 7360 5.984725 TCAAATGGACTACAACATACGGAT 58.015 37.500 0.00 0.00 0.00 4.18
6643 7361 5.408880 TCAAATGGACTACAACATACGGA 57.591 39.130 0.00 0.00 0.00 4.69
6644 7362 6.489127 TTTCAAATGGACTACAACATACGG 57.511 37.500 0.00 0.00 0.00 4.02
6645 7363 7.526608 ACATTTCAAATGGACTACAACATACG 58.473 34.615 14.70 0.00 0.00 3.06
6646 7364 8.730680 AGACATTTCAAATGGACTACAACATAC 58.269 33.333 14.70 0.00 0.00 2.39
6647 7365 8.862325 AGACATTTCAAATGGACTACAACATA 57.138 30.769 14.70 0.00 0.00 2.29
6648 7366 7.765695 AGACATTTCAAATGGACTACAACAT 57.234 32.000 14.70 0.00 0.00 2.71
6649 7367 8.684386 TTAGACATTTCAAATGGACTACAACA 57.316 30.769 14.70 1.25 0.00 3.33
6650 7368 9.959749 TTTTAGACATTTCAAATGGACTACAAC 57.040 29.630 14.70 0.00 0.00 3.32
6655 7373 9.136323 AGTCTTTTTAGACATTTCAAATGGACT 57.864 29.630 14.70 14.18 41.02 3.85
6656 7374 9.750125 AAGTCTTTTTAGACATTTCAAATGGAC 57.250 29.630 14.70 8.92 41.02 4.02
6673 7391 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
6674 7392 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
6675 7393 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
6676 7394 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
6677 7395 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
6678 7396 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
6679 7397 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
6680 7398 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
6681 7399 7.068702 TGTACTCCCTCCGTTCCTAAATATAA 58.931 38.462 0.00 0.00 0.00 0.98
6682 7400 6.613699 TGTACTCCCTCCGTTCCTAAATATA 58.386 40.000 0.00 0.00 0.00 0.86
6683 7401 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
6684 7402 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
6685 7403 3.705072 CTGTACTCCCTCCGTTCCTAAAT 59.295 47.826 0.00 0.00 0.00 1.40
6686 7404 3.094572 CTGTACTCCCTCCGTTCCTAAA 58.905 50.000 0.00 0.00 0.00 1.85
6687 7405 2.731572 CTGTACTCCCTCCGTTCCTAA 58.268 52.381 0.00 0.00 0.00 2.69
6688 7406 1.684248 GCTGTACTCCCTCCGTTCCTA 60.684 57.143 0.00 0.00 0.00 2.94
6689 7407 0.971447 GCTGTACTCCCTCCGTTCCT 60.971 60.000 0.00 0.00 0.00 3.36
6690 7408 0.971447 AGCTGTACTCCCTCCGTTCC 60.971 60.000 0.00 0.00 0.00 3.62
6691 7409 0.173708 CAGCTGTACTCCCTCCGTTC 59.826 60.000 5.25 0.00 0.00 3.95
6692 7410 0.251653 TCAGCTGTACTCCCTCCGTT 60.252 55.000 14.67 0.00 0.00 4.44
6693 7411 0.033011 ATCAGCTGTACTCCCTCCGT 60.033 55.000 14.67 0.00 0.00 4.69
6694 7412 1.982660 TATCAGCTGTACTCCCTCCG 58.017 55.000 14.67 0.00 0.00 4.63
6695 7413 6.544564 GTCTATATATCAGCTGTACTCCCTCC 59.455 46.154 14.67 0.00 0.00 4.30
6696 7414 6.544564 GGTCTATATATCAGCTGTACTCCCTC 59.455 46.154 14.67 0.00 0.00 4.30
6697 7415 6.428295 GGTCTATATATCAGCTGTACTCCCT 58.572 44.000 14.67 0.00 0.00 4.20
6698 7416 5.595133 GGGTCTATATATCAGCTGTACTCCC 59.405 48.000 14.67 10.30 0.00 4.30
6699 7417 6.188407 TGGGTCTATATATCAGCTGTACTCC 58.812 44.000 14.67 5.40 0.00 3.85
6700 7418 7.777910 AGATGGGTCTATATATCAGCTGTACTC 59.222 40.741 14.67 1.54 31.36 2.59
6701 7419 7.647827 AGATGGGTCTATATATCAGCTGTACT 58.352 38.462 14.67 2.52 31.36 2.73
6702 7420 7.889873 AGATGGGTCTATATATCAGCTGTAC 57.110 40.000 14.67 0.86 31.36 2.90
6752 7470 8.697846 TCTACTAATACATGAAACTTGGTTCG 57.302 34.615 0.00 0.00 0.00 3.95
6765 7483 6.203072 ACCTCCACCACTTCTACTAATACAT 58.797 40.000 0.00 0.00 0.00 2.29
6804 7522 4.980590 TCACATGTTTGCATATTTCCGTC 58.019 39.130 0.00 0.00 33.30 4.79
6806 7524 6.890663 AATTCACATGTTTGCATATTTCCG 57.109 33.333 0.00 0.00 33.30 4.30
7041 7802 5.715070 TCTGTTGGGTACAAAAACAAAGTG 58.285 37.500 8.14 0.00 38.54 3.16
7057 7818 4.935352 TCAAACTTTTGGGATCTGTTGG 57.065 40.909 1.94 0.00 38.66 3.77
7076 7837 3.702048 CCTTCGGCGGGGTCTTCA 61.702 66.667 7.21 0.00 0.00 3.02
7337 8103 1.341209 CTGGGGGAAAAACAAGTCTGC 59.659 52.381 0.00 0.00 0.00 4.26
7351 8121 5.244755 CAAACAATGTAAAAATCCTGGGGG 58.755 41.667 0.00 0.00 0.00 5.40
7560 8334 1.173913 AAAATAGGACTGCCGCAACC 58.826 50.000 7.86 7.86 39.96 3.77
7561 8335 3.792124 GCATAAAATAGGACTGCCGCAAC 60.792 47.826 0.00 0.00 39.96 4.17
7654 8431 9.754382 GGTATCAAAATACAAACGGTATAGAGA 57.246 33.333 0.00 0.00 41.87 3.10
7661 8438 8.534496 ACTACTAGGTATCAAAATACAAACGGT 58.466 33.333 0.00 0.00 39.69 4.83
7662 8439 8.814235 CACTACTAGGTATCAAAATACAAACGG 58.186 37.037 0.00 0.00 39.69 4.44
7671 8448 9.750783 ACTTCTACTCACTACTAGGTATCAAAA 57.249 33.333 0.00 0.00 0.00 2.44
7673 8450 9.175312 CAACTTCTACTCACTACTAGGTATCAA 57.825 37.037 0.00 0.00 0.00 2.57
7674 8451 7.774157 CCAACTTCTACTCACTACTAGGTATCA 59.226 40.741 0.00 0.00 0.00 2.15
7675 8452 7.229106 CCCAACTTCTACTCACTACTAGGTATC 59.771 44.444 0.00 0.00 0.00 2.24
7676 8453 7.061688 CCCAACTTCTACTCACTACTAGGTAT 58.938 42.308 0.00 0.00 0.00 2.73
7678 8455 5.014966 TCCCAACTTCTACTCACTACTAGGT 59.985 44.000 0.00 0.00 0.00 3.08
7679 8456 5.507637 TCCCAACTTCTACTCACTACTAGG 58.492 45.833 0.00 0.00 0.00 3.02
7680 8457 6.095720 CCTTCCCAACTTCTACTCACTACTAG 59.904 46.154 0.00 0.00 0.00 2.57
7681 8458 5.950549 CCTTCCCAACTTCTACTCACTACTA 59.049 44.000 0.00 0.00 0.00 1.82
7682 8459 4.773149 CCTTCCCAACTTCTACTCACTACT 59.227 45.833 0.00 0.00 0.00 2.57
7683 8460 4.527427 ACCTTCCCAACTTCTACTCACTAC 59.473 45.833 0.00 0.00 0.00 2.73
7689 8466 4.415224 TCCTACCTTCCCAACTTCTACT 57.585 45.455 0.00 0.00 0.00 2.57
7695 8472 4.167307 TGTCTTTTTCCTACCTTCCCAACT 59.833 41.667 0.00 0.00 0.00 3.16
7701 8633 5.966742 AATGCTGTCTTTTTCCTACCTTC 57.033 39.130 0.00 0.00 0.00 3.46
7712 8644 9.686683 ATACCTTTGTAGATAAATGCTGTCTTT 57.313 29.630 0.00 0.00 0.00 2.52
7715 8647 9.765795 ACTATACCTTTGTAGATAAATGCTGTC 57.234 33.333 0.00 0.00 0.00 3.51
7783 8763 0.939419 GTTTCTACCACGCACCGTTT 59.061 50.000 0.00 0.00 38.32 3.60
7784 8764 1.216941 CGTTTCTACCACGCACCGTT 61.217 55.000 0.00 0.00 38.32 4.44
7797 8777 2.391724 ATCACCACCGTGCCGTTTCT 62.392 55.000 0.00 0.00 40.04 2.52
7824 8804 2.086054 CCAGACGGGAGAAAAGACAG 57.914 55.000 0.00 0.00 40.01 3.51
7860 8841 1.203038 TCCCAACAATGACACCATGCT 60.203 47.619 0.00 0.00 32.36 3.79
7867 8848 2.223923 CGGCTTTTTCCCAACAATGACA 60.224 45.455 0.00 0.00 0.00 3.58
7870 8851 2.295909 TCTCGGCTTTTTCCCAACAATG 59.704 45.455 0.00 0.00 0.00 2.82
7871 8852 2.593026 TCTCGGCTTTTTCCCAACAAT 58.407 42.857 0.00 0.00 0.00 2.71
7881 8865 3.303351 AATCCATCCATCTCGGCTTTT 57.697 42.857 0.00 0.00 33.14 2.27
7916 8904 1.991813 TGGATCCTTCACCAATCACCA 59.008 47.619 14.23 0.00 32.93 4.17
7926 8914 1.229368 TCGGTGGGTGGATCCTTCA 60.229 57.895 14.23 5.75 36.25 3.02
7928 8916 2.298661 GGTCGGTGGGTGGATCCTT 61.299 63.158 14.23 0.00 36.25 3.36
8083 9080 2.816360 CTCACGCACGGCATCCATG 61.816 63.158 0.00 0.00 0.00 3.66
8143 9140 2.450476 GTAGAGTAGACCCCGGAAACA 58.550 52.381 0.73 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.