Multiple sequence alignment - TraesCS7D01G475800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G475800 chr7D 100.000 2548 0 0 701 3248 587754482 587751935 0.000000e+00 4706
1 TraesCS7D01G475800 chr7D 93.023 1677 54 9 978 2631 521761667 521760031 0.000000e+00 2390
2 TraesCS7D01G475800 chr7D 100.000 241 0 0 1 241 587755182 587754942 2.300000e-121 446
3 TraesCS7D01G475800 chr7D 85.128 195 16 7 2668 2849 534673263 534673457 1.540000e-43 187
4 TraesCS7D01G475800 chr3D 96.089 1969 37 5 701 2631 114127050 114125084 0.000000e+00 3173
5 TraesCS7D01G475800 chr3D 92.985 1682 70 8 978 2629 357079134 357080797 0.000000e+00 2409
6 TraesCS7D01G475800 chr3D 94.393 1516 63 6 1138 2631 101711857 101710342 0.000000e+00 2309
7 TraesCS7D01G475800 chr3D 94.979 239 12 0 3 241 114127377 114127139 3.060000e-100 375
8 TraesCS7D01G475800 chr3D 87.368 285 32 3 701 982 357078824 357079107 1.120000e-84 324
9 TraesCS7D01G475800 chr3B 94.828 1972 62 10 701 2634 414797034 414799003 0.000000e+00 3040
10 TraesCS7D01G475800 chr3B 93.595 1171 37 5 701 1833 405406816 405405646 0.000000e+00 1712
11 TraesCS7D01G475800 chr3B 94.872 312 14 2 2717 3026 467677714 467678025 1.350000e-133 486
12 TraesCS7D01G475800 chr3B 85.124 363 46 6 2671 3026 583038952 583038591 6.620000e-97 364
13 TraesCS7D01G475800 chr3B 91.286 241 19 2 1 241 414796707 414796945 8.690000e-86 327
14 TraesCS7D01G475800 chr1B 94.088 1962 70 9 701 2629 464487508 464485560 0.000000e+00 2939
15 TraesCS7D01G475800 chr1B 94.908 1846 50 12 702 2505 143857133 143855290 0.000000e+00 2848
16 TraesCS7D01G475800 chr1B 94.628 242 12 1 1 241 642801646 642801887 1.100000e-99 374
17 TraesCS7D01G475800 chr1B 94.561 239 12 1 3 241 143857794 143857557 5.120000e-98 368
18 TraesCS7D01G475800 chr1B 96.023 176 6 1 1 176 464511938 464511764 5.300000e-73 285
19 TraesCS7D01G475800 chr1B 91.045 201 18 0 701 901 642802224 642802424 4.130000e-69 272
20 TraesCS7D01G475800 chr4A 92.725 1677 80 5 978 2631 690128761 690127104 0.000000e+00 2383
21 TraesCS7D01G475800 chr4A 89.105 257 27 1 701 957 690129070 690128815 5.230000e-83 318
22 TraesCS7D01G475800 chr4D 93.381 1541 61 6 978 2496 19342293 19340772 0.000000e+00 2242
23 TraesCS7D01G475800 chr4D 94.234 1110 60 4 1524 2631 257912575 257913682 0.000000e+00 1692
24 TraesCS7D01G475800 chr4D 96.095 845 17 4 701 1536 486558179 486559016 0.000000e+00 1363
25 TraesCS7D01G475800 chr4D 96.244 213 7 1 3 215 486557441 486557652 6.670000e-92 348
26 TraesCS7D01G475800 chr4D 88.129 278 27 4 701 972 206716234 206716511 3.130000e-85 326
27 TraesCS7D01G475800 chr5B 94.368 1456 53 7 839 2265 26240094 26241549 0.000000e+00 2207
28 TraesCS7D01G475800 chr5D 93.786 1384 62 4 1268 2629 553984486 553985867 0.000000e+00 2058
29 TraesCS7D01G475800 chr5D 94.044 319 16 3 2710 3026 241902501 241902818 6.300000e-132 481
30 TraesCS7D01G475800 chr5D 88.772 285 28 3 701 982 553975114 553975397 2.400000e-91 346
31 TraesCS7D01G475800 chr5D 86.307 241 29 4 1 239 553974788 553975026 3.210000e-65 259
32 TraesCS7D01G475800 chr5D 95.238 63 3 0 2628 2690 241902467 241902529 2.060000e-17 100
33 TraesCS7D01G475800 chr5D 87.500 88 9 2 2942 3027 423472099 423472012 2.060000e-17 100
34 TraesCS7D01G475800 chr2A 94.781 1322 65 4 1130 2449 133964590 133963271 0.000000e+00 2056
35 TraesCS7D01G475800 chr2A 94.886 176 7 1 2628 2801 148864717 148864542 1.150000e-69 274
36 TraesCS7D01G475800 chr2A 90.798 163 14 1 2865 3026 148864540 148864378 1.960000e-52 217
37 TraesCS7D01G475800 chrUn 91.034 290 7 4 707 978 112620020 112619732 1.100000e-99 374
38 TraesCS7D01G475800 chrUn 93.689 206 13 0 2 207 112620757 112620552 3.150000e-80 309
39 TraesCS7D01G475800 chrUn 87.912 91 8 3 2940 3029 41824155 41824067 1.590000e-18 104
40 TraesCS7D01G475800 chrUn 87.912 91 8 3 2940 3029 345384848 345384760 1.590000e-18 104
41 TraesCS7D01G475800 chr2D 88.256 281 30 2 701 978 468167919 468167639 1.870000e-87 333
42 TraesCS7D01G475800 chr2D 85.833 240 29 5 2 239 468168234 468167998 1.930000e-62 250
43 TraesCS7D01G475800 chr4B 91.892 74 4 2 2954 3026 451625492 451625420 5.730000e-18 102


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G475800 chr7D 587751935 587755182 3247 True 2576.0 4706 100.0000 1 3248 2 chr7D.!!$R2 3247
1 TraesCS7D01G475800 chr7D 521760031 521761667 1636 True 2390.0 2390 93.0230 978 2631 1 chr7D.!!$R1 1653
2 TraesCS7D01G475800 chr3D 101710342 101711857 1515 True 2309.0 2309 94.3930 1138 2631 1 chr3D.!!$R1 1493
3 TraesCS7D01G475800 chr3D 114125084 114127377 2293 True 1774.0 3173 95.5340 3 2631 2 chr3D.!!$R2 2628
4 TraesCS7D01G475800 chr3D 357078824 357080797 1973 False 1366.5 2409 90.1765 701 2629 2 chr3D.!!$F1 1928
5 TraesCS7D01G475800 chr3B 405405646 405406816 1170 True 1712.0 1712 93.5950 701 1833 1 chr3B.!!$R1 1132
6 TraesCS7D01G475800 chr3B 414796707 414799003 2296 False 1683.5 3040 93.0570 1 2634 2 chr3B.!!$F2 2633
7 TraesCS7D01G475800 chr1B 464485560 464487508 1948 True 2939.0 2939 94.0880 701 2629 1 chr1B.!!$R1 1928
8 TraesCS7D01G475800 chr1B 143855290 143857794 2504 True 1608.0 2848 94.7345 3 2505 2 chr1B.!!$R3 2502
9 TraesCS7D01G475800 chr1B 642801646 642802424 778 False 323.0 374 92.8365 1 901 2 chr1B.!!$F1 900
10 TraesCS7D01G475800 chr4A 690127104 690129070 1966 True 1350.5 2383 90.9150 701 2631 2 chr4A.!!$R1 1930
11 TraesCS7D01G475800 chr4D 19340772 19342293 1521 True 2242.0 2242 93.3810 978 2496 1 chr4D.!!$R1 1518
12 TraesCS7D01G475800 chr4D 257912575 257913682 1107 False 1692.0 1692 94.2340 1524 2631 1 chr4D.!!$F2 1107
13 TraesCS7D01G475800 chr4D 486557441 486559016 1575 False 855.5 1363 96.1695 3 1536 2 chr4D.!!$F3 1533
14 TraesCS7D01G475800 chr5B 26240094 26241549 1455 False 2207.0 2207 94.3680 839 2265 1 chr5B.!!$F1 1426
15 TraesCS7D01G475800 chr5D 553984486 553985867 1381 False 2058.0 2058 93.7860 1268 2629 1 chr5D.!!$F1 1361
16 TraesCS7D01G475800 chr5D 553974788 553975397 609 False 302.5 346 87.5395 1 982 2 chr5D.!!$F3 981
17 TraesCS7D01G475800 chr2A 133963271 133964590 1319 True 2056.0 2056 94.7810 1130 2449 1 chr2A.!!$R1 1319
18 TraesCS7D01G475800 chrUn 112619732 112620757 1025 True 341.5 374 92.3615 2 978 2 chrUn.!!$R3 976
19 TraesCS7D01G475800 chr2D 468167639 468168234 595 True 291.5 333 87.0445 2 978 2 chr2D.!!$R1 976

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
176 180 1.827792 TTTCCCAACTTCTCTCCCCA 58.172 50.0 0.0 0.0 0.0 4.96 F
2026 2168 4.525487 TGATCAAGCTCAAGGAAGCAAAAT 59.475 37.5 0.0 0.0 45.0 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2026 2168 0.182061 GCCATGAGCTCCTTCCATGA 59.818 55.0 12.15 0.0 39.86 3.07 R
2957 3111 0.108207 GCAGCCTATCCACATCAGCT 59.892 55.0 0.00 0.0 0.00 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
176 180 1.827792 TTTCCCAACTTCTCTCCCCA 58.172 50.000 0.00 0.00 0.00 4.96
2026 2168 4.525487 TGATCAAGCTCAAGGAAGCAAAAT 59.475 37.500 0.00 0.00 45.00 1.82
2158 2300 0.815734 GAAGAGGCTACTGCGTGGTA 59.184 55.000 0.00 0.00 40.82 3.25
2434 2581 6.882610 TTGAAGTGATTTATGTTGCTGTCT 57.117 33.333 0.00 0.00 0.00 3.41
2631 2785 4.383118 GGGCTCTGTTAGACATGCTCTTAA 60.383 45.833 0.00 0.00 33.25 1.85
2632 2786 5.363939 GGCTCTGTTAGACATGCTCTTAAT 58.636 41.667 0.00 0.00 31.12 1.40
2633 2787 5.236047 GGCTCTGTTAGACATGCTCTTAATG 59.764 44.000 0.00 0.00 31.12 1.90
2634 2788 5.236047 GCTCTGTTAGACATGCTCTTAATGG 59.764 44.000 0.00 0.00 0.00 3.16
2635 2789 5.118990 TCTGTTAGACATGCTCTTAATGGC 58.881 41.667 0.00 0.00 32.84 4.40
2636 2790 3.871006 TGTTAGACATGCTCTTAATGGCG 59.129 43.478 0.00 0.00 38.16 5.69
2637 2791 1.959042 AGACATGCTCTTAATGGCGG 58.041 50.000 0.00 0.00 38.16 6.13
2638 2792 0.308993 GACATGCTCTTAATGGCGGC 59.691 55.000 0.00 0.00 0.00 6.53
2639 2793 1.280746 CATGCTCTTAATGGCGGCG 59.719 57.895 0.51 0.51 0.00 6.46
2640 2794 1.893808 ATGCTCTTAATGGCGGCGG 60.894 57.895 9.78 0.00 0.00 6.13
2641 2795 3.953887 GCTCTTAATGGCGGCGGC 61.954 66.667 27.76 27.76 38.90 6.53
2642 2796 3.640000 CTCTTAATGGCGGCGGCG 61.640 66.667 28.70 28.70 41.24 6.46
2667 2821 4.521062 CCGGCGAGCCTCTCCTTG 62.521 72.222 9.30 0.00 0.00 3.61
2668 2822 4.521062 CGGCGAGCCTCTCCTTGG 62.521 72.222 12.70 0.00 0.00 3.61
2669 2823 3.394836 GGCGAGCCTCTCCTTGGT 61.395 66.667 6.90 0.00 0.00 3.67
2670 2824 2.665603 GCGAGCCTCTCCTTGGTT 59.334 61.111 0.00 0.00 0.00 3.67
2671 2825 1.448717 GCGAGCCTCTCCTTGGTTC 60.449 63.158 0.00 0.00 0.00 3.62
2672 2826 1.893919 GCGAGCCTCTCCTTGGTTCT 61.894 60.000 0.00 0.00 33.47 3.01
2673 2827 0.108424 CGAGCCTCTCCTTGGTTCTG 60.108 60.000 0.00 0.00 33.47 3.02
2674 2828 1.270907 GAGCCTCTCCTTGGTTCTGA 58.729 55.000 0.00 0.00 32.98 3.27
2675 2829 0.980423 AGCCTCTCCTTGGTTCTGAC 59.020 55.000 0.00 0.00 0.00 3.51
2676 2830 0.035915 GCCTCTCCTTGGTTCTGACC 60.036 60.000 0.00 0.00 46.71 4.02
2684 2838 4.353437 GGTTCTGACCGTCGGCGT 62.353 66.667 12.28 0.00 35.91 5.68
2685 2839 3.103911 GTTCTGACCGTCGGCGTG 61.104 66.667 12.28 1.93 36.15 5.34
2686 2840 4.351938 TTCTGACCGTCGGCGTGG 62.352 66.667 12.28 17.03 36.15 4.94
2721 2875 3.298320 GGAGAGCTCCTCTGGTTCT 57.702 57.895 10.93 0.00 46.16 3.01
2722 2876 0.823460 GGAGAGCTCCTCTGGTTCTG 59.177 60.000 10.93 0.00 46.16 3.02
2723 2877 1.618345 GGAGAGCTCCTCTGGTTCTGA 60.618 57.143 10.93 0.00 46.16 3.27
2724 2878 1.476488 GAGAGCTCCTCTGGTTCTGAC 59.524 57.143 10.93 0.00 41.35 3.51
2725 2879 0.534873 GAGCTCCTCTGGTTCTGACC 59.465 60.000 0.87 0.00 46.71 4.02
2743 2897 3.378602 GCCGGCGTGGGGAAAATT 61.379 61.111 12.58 0.00 38.63 1.82
2744 2898 2.938086 GCCGGCGTGGGGAAAATTT 61.938 57.895 12.58 0.00 38.63 1.82
2745 2899 1.080161 CCGGCGTGGGGAAAATTTG 60.080 57.895 6.01 0.00 0.00 2.32
2746 2900 1.080161 CGGCGTGGGGAAAATTTGG 60.080 57.895 0.00 0.00 0.00 3.28
2747 2901 1.295101 GGCGTGGGGAAAATTTGGG 59.705 57.895 0.00 0.00 0.00 4.12
2748 2902 1.295101 GCGTGGGGAAAATTTGGGG 59.705 57.895 0.00 0.00 0.00 4.96
2749 2903 1.979262 CGTGGGGAAAATTTGGGGG 59.021 57.895 0.00 0.00 0.00 5.40
2750 2904 0.543174 CGTGGGGAAAATTTGGGGGA 60.543 55.000 0.00 0.00 0.00 4.81
2751 2905 1.735926 GTGGGGAAAATTTGGGGGAA 58.264 50.000 0.00 0.00 0.00 3.97
2752 2906 2.058705 GTGGGGAAAATTTGGGGGAAA 58.941 47.619 0.00 0.00 0.00 3.13
2753 2907 2.039746 GTGGGGAAAATTTGGGGGAAAG 59.960 50.000 0.00 0.00 0.00 2.62
2754 2908 2.089925 TGGGGAAAATTTGGGGGAAAGA 60.090 45.455 0.00 0.00 0.00 2.52
2755 2909 3.189606 GGGGAAAATTTGGGGGAAAGAT 58.810 45.455 0.00 0.00 0.00 2.40
2756 2910 3.054434 GGGGAAAATTTGGGGGAAAGATG 60.054 47.826 0.00 0.00 0.00 2.90
2757 2911 3.843619 GGGAAAATTTGGGGGAAAGATGA 59.156 43.478 0.00 0.00 0.00 2.92
2758 2912 4.323485 GGGAAAATTTGGGGGAAAGATGAC 60.323 45.833 0.00 0.00 0.00 3.06
2759 2913 4.532126 GGAAAATTTGGGGGAAAGATGACT 59.468 41.667 0.00 0.00 0.00 3.41
2760 2914 5.719563 GGAAAATTTGGGGGAAAGATGACTA 59.280 40.000 0.00 0.00 0.00 2.59
2761 2915 6.351033 GGAAAATTTGGGGGAAAGATGACTAC 60.351 42.308 0.00 0.00 0.00 2.73
2762 2916 3.343941 TTTGGGGGAAAGATGACTACG 57.656 47.619 0.00 0.00 0.00 3.51
2763 2917 1.200519 TGGGGGAAAGATGACTACGG 58.799 55.000 0.00 0.00 0.00 4.02
2764 2918 1.273381 TGGGGGAAAGATGACTACGGA 60.273 52.381 0.00 0.00 0.00 4.69
2765 2919 1.835531 GGGGGAAAGATGACTACGGAA 59.164 52.381 0.00 0.00 0.00 4.30
2766 2920 2.237893 GGGGGAAAGATGACTACGGAAA 59.762 50.000 0.00 0.00 0.00 3.13
2767 2921 3.307904 GGGGGAAAGATGACTACGGAAAA 60.308 47.826 0.00 0.00 0.00 2.29
2768 2922 4.524053 GGGGAAAGATGACTACGGAAAAT 58.476 43.478 0.00 0.00 0.00 1.82
2769 2923 4.575236 GGGGAAAGATGACTACGGAAAATC 59.425 45.833 0.00 0.00 0.00 2.17
2770 2924 5.429130 GGGAAAGATGACTACGGAAAATCT 58.571 41.667 0.00 0.00 0.00 2.40
2771 2925 5.880887 GGGAAAGATGACTACGGAAAATCTT 59.119 40.000 0.00 0.00 38.83 2.40
2772 2926 6.183360 GGGAAAGATGACTACGGAAAATCTTG 60.183 42.308 0.00 0.00 37.58 3.02
2773 2927 6.371825 GGAAAGATGACTACGGAAAATCTTGT 59.628 38.462 0.00 0.00 37.58 3.16
2774 2928 7.094762 GGAAAGATGACTACGGAAAATCTTGTT 60.095 37.037 0.00 0.00 37.58 2.83
2775 2929 7.745620 AAGATGACTACGGAAAATCTTGTTT 57.254 32.000 0.00 0.00 36.49 2.83
2776 2930 7.745620 AGATGACTACGGAAAATCTTGTTTT 57.254 32.000 0.00 0.00 0.00 2.43
2777 2931 8.166422 AGATGACTACGGAAAATCTTGTTTTT 57.834 30.769 0.00 0.00 0.00 1.94
2797 2951 4.373348 TTTTTACTTTGGTGGGTTCACG 57.627 40.909 0.00 0.00 44.50 4.35
2798 2952 1.310904 TTACTTTGGTGGGTTCACGC 58.689 50.000 0.00 0.00 44.50 5.34
2799 2953 0.180642 TACTTTGGTGGGTTCACGCA 59.819 50.000 0.00 0.00 44.50 5.24
2804 2958 3.041940 GTGGGTTCACGCACGAGG 61.042 66.667 10.96 0.00 47.00 4.63
2805 2959 3.542676 TGGGTTCACGCACGAGGT 61.543 61.111 0.00 0.00 33.68 3.85
2806 2960 3.041940 GGGTTCACGCACGAGGTG 61.042 66.667 0.00 0.00 36.51 4.00
2807 2961 3.041940 GGTTCACGCACGAGGTGG 61.042 66.667 0.00 0.00 36.09 4.61
2808 2962 2.279918 GTTCACGCACGAGGTGGT 60.280 61.111 0.00 0.00 36.09 4.16
2809 2963 1.885850 GTTCACGCACGAGGTGGTT 60.886 57.895 0.00 0.00 36.09 3.67
2810 2964 1.885388 TTCACGCACGAGGTGGTTG 60.885 57.895 0.00 0.00 36.09 3.77
2811 2965 2.581208 TTCACGCACGAGGTGGTTGT 62.581 55.000 0.00 0.00 36.09 3.32
2812 2966 2.279918 ACGCACGAGGTGGTTGTC 60.280 61.111 0.00 0.00 33.64 3.18
2813 2967 3.041940 CGCACGAGGTGGTTGTCC 61.042 66.667 0.00 0.00 33.64 4.02
2814 2968 2.426023 GCACGAGGTGGTTGTCCT 59.574 61.111 0.00 0.00 38.09 3.85
2815 2969 1.668151 GCACGAGGTGGTTGTCCTC 60.668 63.158 0.00 2.27 45.56 3.71
2816 2970 2.050269 CACGAGGTGGTTGTCCTCT 58.950 57.895 9.74 0.00 46.49 3.69
2817 2971 0.393077 CACGAGGTGGTTGTCCTCTT 59.607 55.000 9.74 0.00 46.49 2.85
2818 2972 0.680061 ACGAGGTGGTTGTCCTCTTC 59.320 55.000 9.74 0.00 46.49 2.87
2819 2973 0.969894 CGAGGTGGTTGTCCTCTTCT 59.030 55.000 9.74 0.00 46.49 2.85
2820 2974 1.337260 CGAGGTGGTTGTCCTCTTCTG 60.337 57.143 9.74 0.00 46.49 3.02
2821 2975 1.694696 GAGGTGGTTGTCCTCTTCTGT 59.305 52.381 4.91 0.00 45.56 3.41
2822 2976 2.897969 GAGGTGGTTGTCCTCTTCTGTA 59.102 50.000 4.91 0.00 45.56 2.74
2823 2977 2.633481 AGGTGGTTGTCCTCTTCTGTAC 59.367 50.000 0.00 0.00 34.23 2.90
2824 2978 2.633481 GGTGGTTGTCCTCTTCTGTACT 59.367 50.000 0.00 0.00 34.23 2.73
2825 2979 3.306156 GGTGGTTGTCCTCTTCTGTACTC 60.306 52.174 0.00 0.00 34.23 2.59
2826 2980 3.574826 GTGGTTGTCCTCTTCTGTACTCT 59.425 47.826 0.00 0.00 34.23 3.24
2827 2981 3.574396 TGGTTGTCCTCTTCTGTACTCTG 59.426 47.826 0.00 0.00 34.23 3.35
2828 2982 3.574826 GGTTGTCCTCTTCTGTACTCTGT 59.425 47.826 0.00 0.00 0.00 3.41
2829 2983 4.765856 GGTTGTCCTCTTCTGTACTCTGTA 59.234 45.833 0.00 0.00 0.00 2.74
2830 2984 5.335819 GGTTGTCCTCTTCTGTACTCTGTAC 60.336 48.000 0.00 1.33 0.00 2.90
2831 2985 4.333690 TGTCCTCTTCTGTACTCTGTACC 58.666 47.826 5.55 0.00 0.00 3.34
2832 2986 3.374678 GTCCTCTTCTGTACTCTGTACCG 59.625 52.174 5.55 0.12 0.00 4.02
2833 2987 2.097791 CCTCTTCTGTACTCTGTACCGC 59.902 54.545 5.55 0.00 0.00 5.68
2834 2988 3.011119 CTCTTCTGTACTCTGTACCGCT 58.989 50.000 5.55 0.00 0.00 5.52
2835 2989 4.190001 CTCTTCTGTACTCTGTACCGCTA 58.810 47.826 5.55 0.00 0.00 4.26
2836 2990 4.190001 TCTTCTGTACTCTGTACCGCTAG 58.810 47.826 5.55 0.00 0.00 3.42
2837 2991 2.286872 TCTGTACTCTGTACCGCTAGC 58.713 52.381 4.06 4.06 0.00 3.42
2838 2992 1.003759 CTGTACTCTGTACCGCTAGCG 60.004 57.143 29.93 29.93 39.44 4.26
2839 2993 1.293924 GTACTCTGTACCGCTAGCGA 58.706 55.000 37.39 17.01 42.83 4.93
2840 2994 1.261089 GTACTCTGTACCGCTAGCGAG 59.739 57.143 37.39 27.48 42.83 5.03
2841 2995 0.392729 ACTCTGTACCGCTAGCGAGT 60.393 55.000 37.39 31.05 42.83 4.18
2842 2996 0.028242 CTCTGTACCGCTAGCGAGTG 59.972 60.000 37.39 23.03 42.83 3.51
2843 2997 0.392060 TCTGTACCGCTAGCGAGTGA 60.392 55.000 37.39 22.51 42.83 3.41
2844 2998 0.450583 CTGTACCGCTAGCGAGTGAA 59.549 55.000 37.39 21.51 42.83 3.18
2845 2999 0.169672 TGTACCGCTAGCGAGTGAAC 59.830 55.000 37.39 25.17 42.83 3.18
2846 3000 0.860618 GTACCGCTAGCGAGTGAACG 60.861 60.000 37.39 20.82 42.83 3.95
2847 3001 1.300971 TACCGCTAGCGAGTGAACGT 61.301 55.000 37.39 25.12 42.83 3.99
2848 3002 1.443872 CCGCTAGCGAGTGAACGTT 60.444 57.895 37.39 0.00 42.83 3.99
2849 3003 1.403972 CCGCTAGCGAGTGAACGTTC 61.404 60.000 37.39 21.42 42.83 3.95
2850 3004 1.721257 CGCTAGCGAGTGAACGTTCG 61.721 60.000 32.98 13.09 42.83 3.95
2851 3005 1.403972 GCTAGCGAGTGAACGTTCGG 61.404 60.000 22.48 12.79 37.30 4.30
2852 3006 2.726274 AGCGAGTGAACGTTCGGT 59.274 55.556 22.48 14.47 42.04 4.69
2853 3007 0.311790 TAGCGAGTGAACGTTCGGTT 59.688 50.000 22.48 10.86 44.09 4.44
2863 3017 1.901591 ACGTTCGGTTCTCCTCTACA 58.098 50.000 0.00 0.00 0.00 2.74
2864 3018 1.538950 ACGTTCGGTTCTCCTCTACAC 59.461 52.381 0.00 0.00 0.00 2.90
2865 3019 1.811359 CGTTCGGTTCTCCTCTACACT 59.189 52.381 0.00 0.00 0.00 3.55
2866 3020 2.414293 CGTTCGGTTCTCCTCTACACTG 60.414 54.545 0.00 0.00 0.00 3.66
2867 3021 1.835494 TCGGTTCTCCTCTACACTGG 58.165 55.000 0.00 0.00 0.00 4.00
2868 3022 1.075050 TCGGTTCTCCTCTACACTGGT 59.925 52.381 0.00 0.00 0.00 4.00
2869 3023 2.306805 TCGGTTCTCCTCTACACTGGTA 59.693 50.000 0.00 0.00 0.00 3.25
2870 3024 3.087031 CGGTTCTCCTCTACACTGGTAA 58.913 50.000 0.00 0.00 0.00 2.85
2871 3025 3.119566 CGGTTCTCCTCTACACTGGTAAC 60.120 52.174 0.00 0.00 0.00 2.50
2872 3026 4.087907 GGTTCTCCTCTACACTGGTAACT 58.912 47.826 0.00 0.00 37.61 2.24
2873 3027 4.082136 GGTTCTCCTCTACACTGGTAACTG 60.082 50.000 0.00 0.00 42.06 3.16
2874 3028 4.652679 TCTCCTCTACACTGGTAACTGA 57.347 45.455 0.00 0.00 39.15 3.41
2875 3029 5.194473 TCTCCTCTACACTGGTAACTGAT 57.806 43.478 0.00 0.00 39.15 2.90
2876 3030 5.194432 TCTCCTCTACACTGGTAACTGATC 58.806 45.833 0.00 0.00 39.15 2.92
2877 3031 3.945921 TCCTCTACACTGGTAACTGATCG 59.054 47.826 0.00 0.00 39.15 3.69
2878 3032 3.489398 CCTCTACACTGGTAACTGATCGC 60.489 52.174 0.00 0.00 39.15 4.58
2879 3033 3.353557 TCTACACTGGTAACTGATCGCT 58.646 45.455 0.00 0.00 39.15 4.93
2880 3034 2.370281 ACACTGGTAACTGATCGCTG 57.630 50.000 0.00 0.00 39.15 5.18
2881 3035 1.893137 ACACTGGTAACTGATCGCTGA 59.107 47.619 0.00 0.00 39.15 4.26
2882 3036 2.094494 ACACTGGTAACTGATCGCTGAG 60.094 50.000 0.00 0.00 39.15 3.35
2883 3037 1.478510 ACTGGTAACTGATCGCTGAGG 59.521 52.381 0.00 0.00 39.15 3.86
2884 3038 1.478510 CTGGTAACTGATCGCTGAGGT 59.521 52.381 0.00 0.00 37.83 3.85
2885 3039 1.204704 TGGTAACTGATCGCTGAGGTG 59.795 52.381 0.00 0.00 37.61 4.00
2886 3040 1.471676 GGTAACTGATCGCTGAGGTGG 60.472 57.143 0.00 0.00 0.00 4.61
2887 3041 0.175760 TAACTGATCGCTGAGGTGGC 59.824 55.000 0.00 0.00 0.00 5.01
2894 3048 3.215245 GCTGAGGTGGCGATCTCT 58.785 61.111 10.56 0.00 29.65 3.10
2895 3049 1.227205 GCTGAGGTGGCGATCTCTG 60.227 63.158 10.56 10.74 32.66 3.35
2896 3050 1.227205 CTGAGGTGGCGATCTCTGC 60.227 63.158 10.56 0.00 29.65 4.26
2897 3051 1.953231 CTGAGGTGGCGATCTCTGCA 61.953 60.000 10.56 0.00 29.65 4.41
2898 3052 1.520342 GAGGTGGCGATCTCTGCAC 60.520 63.158 1.08 0.00 0.00 4.57
2899 3053 1.954362 GAGGTGGCGATCTCTGCACT 61.954 60.000 1.08 0.00 0.00 4.40
2900 3054 1.812922 GGTGGCGATCTCTGCACTG 60.813 63.158 0.00 0.00 0.00 3.66
2901 3055 2.125391 TGGCGATCTCTGCACTGC 60.125 61.111 0.00 0.00 0.00 4.40
2902 3056 2.186384 GGCGATCTCTGCACTGCT 59.814 61.111 1.98 0.00 0.00 4.24
2903 3057 2.172372 GGCGATCTCTGCACTGCTG 61.172 63.158 1.98 1.75 0.00 4.41
2904 3058 1.153686 GCGATCTCTGCACTGCTGA 60.154 57.895 9.94 9.94 35.38 4.26
2905 3059 0.738762 GCGATCTCTGCACTGCTGAA 60.739 55.000 11.33 4.30 36.19 3.02
2906 3060 0.997932 CGATCTCTGCACTGCTGAAC 59.002 55.000 11.33 5.94 36.19 3.18
2907 3061 1.403914 CGATCTCTGCACTGCTGAACT 60.404 52.381 11.33 2.62 36.19 3.01
2908 3062 2.697654 GATCTCTGCACTGCTGAACTT 58.302 47.619 11.33 0.59 36.19 2.66
2909 3063 2.627515 TCTCTGCACTGCTGAACTTT 57.372 45.000 11.33 0.00 36.19 2.66
2910 3064 2.216046 TCTCTGCACTGCTGAACTTTG 58.784 47.619 11.33 0.98 36.19 2.77
2911 3065 1.266175 CTCTGCACTGCTGAACTTTGG 59.734 52.381 11.33 0.00 36.19 3.28
2912 3066 1.027357 CTGCACTGCTGAACTTTGGT 58.973 50.000 1.98 0.00 0.00 3.67
2913 3067 1.406539 CTGCACTGCTGAACTTTGGTT 59.593 47.619 1.98 0.00 38.52 3.67
2914 3068 1.134753 TGCACTGCTGAACTTTGGTTG 59.865 47.619 1.98 0.00 35.58 3.77
2915 3069 1.536709 GCACTGCTGAACTTTGGTTGG 60.537 52.381 0.00 0.00 35.58 3.77
2916 3070 1.750778 CACTGCTGAACTTTGGTTGGT 59.249 47.619 0.00 0.00 35.58 3.67
2917 3071 2.024414 ACTGCTGAACTTTGGTTGGTC 58.976 47.619 0.00 0.00 35.58 4.02
2918 3072 1.338020 CTGCTGAACTTTGGTTGGTCC 59.662 52.381 0.00 0.00 35.58 4.46
2919 3073 0.673985 GCTGAACTTTGGTTGGTCCC 59.326 55.000 0.00 0.00 35.58 4.46
2920 3074 2.026905 GCTGAACTTTGGTTGGTCCCA 61.027 52.381 0.00 0.00 35.58 4.37
2921 3075 1.681264 CTGAACTTTGGTTGGTCCCAC 59.319 52.381 0.00 0.00 35.58 4.61
2922 3076 1.286553 TGAACTTTGGTTGGTCCCACT 59.713 47.619 0.00 0.00 35.58 4.00
2923 3077 2.510382 TGAACTTTGGTTGGTCCCACTA 59.490 45.455 0.00 0.00 35.58 2.74
2924 3078 2.951229 ACTTTGGTTGGTCCCACTAG 57.049 50.000 0.00 0.00 33.14 2.57
2925 3079 2.132686 ACTTTGGTTGGTCCCACTAGT 58.867 47.619 0.00 0.00 33.14 2.57
2926 3080 3.320129 ACTTTGGTTGGTCCCACTAGTA 58.680 45.455 0.00 0.00 33.14 1.82
2927 3081 3.717913 ACTTTGGTTGGTCCCACTAGTAA 59.282 43.478 0.00 0.00 33.14 2.24
2928 3082 4.202430 ACTTTGGTTGGTCCCACTAGTAAG 60.202 45.833 0.00 0.00 33.14 2.34
2929 3083 1.626825 TGGTTGGTCCCACTAGTAAGC 59.373 52.381 0.00 0.00 34.77 3.09
2930 3084 1.065636 GGTTGGTCCCACTAGTAAGCC 60.066 57.143 0.00 0.00 0.00 4.35
2931 3085 0.899720 TTGGTCCCACTAGTAAGCCG 59.100 55.000 0.00 0.00 0.00 5.52
2932 3086 0.974010 TGGTCCCACTAGTAAGCCGG 60.974 60.000 0.00 0.00 0.00 6.13
2933 3087 0.974525 GGTCCCACTAGTAAGCCGGT 60.975 60.000 1.90 0.00 0.00 5.28
2934 3088 0.900421 GTCCCACTAGTAAGCCGGTT 59.100 55.000 1.90 0.00 0.00 4.44
2935 3089 0.899720 TCCCACTAGTAAGCCGGTTG 59.100 55.000 1.90 0.00 0.00 3.77
2936 3090 0.611714 CCCACTAGTAAGCCGGTTGT 59.388 55.000 1.90 0.00 0.00 3.32
2937 3091 1.826720 CCCACTAGTAAGCCGGTTGTA 59.173 52.381 1.90 0.00 0.00 2.41
2938 3092 2.159142 CCCACTAGTAAGCCGGTTGTAG 60.159 54.545 1.90 2.13 0.00 2.74
2939 3093 2.756760 CCACTAGTAAGCCGGTTGTAGA 59.243 50.000 1.90 0.00 0.00 2.59
2940 3094 3.194116 CCACTAGTAAGCCGGTTGTAGAA 59.806 47.826 1.90 0.00 0.00 2.10
2941 3095 4.142004 CCACTAGTAAGCCGGTTGTAGAAT 60.142 45.833 1.90 0.00 0.00 2.40
2942 3096 4.804139 CACTAGTAAGCCGGTTGTAGAATG 59.196 45.833 1.90 0.00 0.00 2.67
2943 3097 4.708421 ACTAGTAAGCCGGTTGTAGAATGA 59.292 41.667 1.90 0.00 0.00 2.57
2944 3098 4.755266 AGTAAGCCGGTTGTAGAATGAT 57.245 40.909 1.90 0.00 0.00 2.45
2945 3099 4.442706 AGTAAGCCGGTTGTAGAATGATG 58.557 43.478 1.90 0.00 0.00 3.07
2946 3100 3.627395 AAGCCGGTTGTAGAATGATGA 57.373 42.857 1.90 0.00 0.00 2.92
2947 3101 3.845781 AGCCGGTTGTAGAATGATGAT 57.154 42.857 1.90 0.00 0.00 2.45
2948 3102 4.955811 AGCCGGTTGTAGAATGATGATA 57.044 40.909 1.90 0.00 0.00 2.15
2949 3103 5.489792 AGCCGGTTGTAGAATGATGATAT 57.510 39.130 1.90 0.00 0.00 1.63
2950 3104 5.240891 AGCCGGTTGTAGAATGATGATATG 58.759 41.667 1.90 0.00 0.00 1.78
2951 3105 4.393062 GCCGGTTGTAGAATGATGATATGG 59.607 45.833 1.90 0.00 0.00 2.74
2952 3106 4.393062 CCGGTTGTAGAATGATGATATGGC 59.607 45.833 0.00 0.00 0.00 4.40
2953 3107 4.091945 CGGTTGTAGAATGATGATATGGCG 59.908 45.833 0.00 0.00 0.00 5.69
2954 3108 5.237815 GGTTGTAGAATGATGATATGGCGA 58.762 41.667 0.00 0.00 0.00 5.54
2955 3109 5.877012 GGTTGTAGAATGATGATATGGCGAT 59.123 40.000 0.00 0.00 0.00 4.58
2956 3110 6.036517 GGTTGTAGAATGATGATATGGCGATC 59.963 42.308 0.00 0.00 0.00 3.69
2957 3111 6.284891 TGTAGAATGATGATATGGCGATCA 57.715 37.500 4.58 4.58 40.08 2.92
2958 3112 6.335777 TGTAGAATGATGATATGGCGATCAG 58.664 40.000 7.79 0.00 39.18 2.90
2959 3113 4.190001 AGAATGATGATATGGCGATCAGC 58.810 43.478 9.72 9.72 41.60 4.26
2968 3122 4.842292 GCGATCAGCTGATGTGGA 57.158 55.556 33.33 2.99 44.04 4.02
2969 3123 3.302375 GCGATCAGCTGATGTGGAT 57.698 52.632 33.33 9.73 44.04 3.41
2970 3124 2.445565 GCGATCAGCTGATGTGGATA 57.554 50.000 33.33 1.26 44.04 2.59
2971 3125 2.335752 GCGATCAGCTGATGTGGATAG 58.664 52.381 33.33 11.01 44.04 2.08
2972 3126 2.930023 GCGATCAGCTGATGTGGATAGG 60.930 54.545 33.33 12.24 44.04 2.57
2973 3127 2.697654 GATCAGCTGATGTGGATAGGC 58.302 52.381 33.33 11.90 34.37 3.93
2974 3128 1.798626 TCAGCTGATGTGGATAGGCT 58.201 50.000 13.74 0.00 0.00 4.58
2975 3129 1.415289 TCAGCTGATGTGGATAGGCTG 59.585 52.381 13.74 0.00 45.56 4.85
2976 3130 0.108207 AGCTGATGTGGATAGGCTGC 59.892 55.000 0.00 0.00 0.00 5.25
2977 3131 0.179037 GCTGATGTGGATAGGCTGCA 60.179 55.000 0.50 0.00 0.00 4.41
2978 3132 1.544982 GCTGATGTGGATAGGCTGCAT 60.545 52.381 0.50 0.00 0.00 3.96
2979 3133 2.860009 CTGATGTGGATAGGCTGCATT 58.140 47.619 0.50 0.00 0.00 3.56
2980 3134 3.220110 CTGATGTGGATAGGCTGCATTT 58.780 45.455 0.50 0.00 0.00 2.32
2981 3135 3.216800 TGATGTGGATAGGCTGCATTTC 58.783 45.455 0.50 0.00 0.00 2.17
2982 3136 2.804986 TGTGGATAGGCTGCATTTCA 57.195 45.000 0.50 0.00 0.00 2.69
2983 3137 3.084536 TGTGGATAGGCTGCATTTCAA 57.915 42.857 0.50 0.00 0.00 2.69
2984 3138 3.429492 TGTGGATAGGCTGCATTTCAAA 58.571 40.909 0.50 0.00 0.00 2.69
2985 3139 3.831333 TGTGGATAGGCTGCATTTCAAAA 59.169 39.130 0.50 0.00 0.00 2.44
2986 3140 4.282957 TGTGGATAGGCTGCATTTCAAAAA 59.717 37.500 0.50 0.00 0.00 1.94
3008 3162 7.385894 AAAAATAGGATAGTGGAGATGAGCT 57.614 36.000 0.00 0.00 0.00 4.09
3009 3163 8.497910 AAAAATAGGATAGTGGAGATGAGCTA 57.502 34.615 0.00 0.00 0.00 3.32
3010 3164 8.677870 AAAATAGGATAGTGGAGATGAGCTAT 57.322 34.615 0.00 0.00 0.00 2.97
3011 3165 8.677870 AAATAGGATAGTGGAGATGAGCTATT 57.322 34.615 0.00 0.00 0.00 1.73
3012 3166 8.677870 AATAGGATAGTGGAGATGAGCTATTT 57.322 34.615 0.00 0.00 0.00 1.40
3013 3167 9.775539 AATAGGATAGTGGAGATGAGCTATTTA 57.224 33.333 0.00 0.00 0.00 1.40
3014 3168 7.716799 AGGATAGTGGAGATGAGCTATTTAG 57.283 40.000 0.00 0.00 0.00 1.85
3015 3169 6.667414 AGGATAGTGGAGATGAGCTATTTAGG 59.333 42.308 0.00 0.00 0.00 2.69
3016 3170 6.439058 GGATAGTGGAGATGAGCTATTTAGGT 59.561 42.308 0.00 0.00 36.62 3.08
3017 3171 7.616150 GGATAGTGGAGATGAGCTATTTAGGTA 59.384 40.741 0.00 0.00 33.58 3.08
3018 3172 9.196139 GATAGTGGAGATGAGCTATTTAGGTAT 57.804 37.037 0.00 0.00 33.58 2.73
3019 3173 7.863901 AGTGGAGATGAGCTATTTAGGTATT 57.136 36.000 0.00 0.00 33.58 1.89
3020 3174 8.958060 AGTGGAGATGAGCTATTTAGGTATTA 57.042 34.615 0.00 0.00 33.58 0.98
3021 3175 9.554053 AGTGGAGATGAGCTATTTAGGTATTAT 57.446 33.333 0.00 0.00 33.58 1.28
3035 3189 8.984112 TTTAGGTATTATAGATACCCAAGCCT 57.016 34.615 10.72 0.00 43.85 4.58
3036 3190 8.605325 TTAGGTATTATAGATACCCAAGCCTC 57.395 38.462 10.72 0.00 43.85 4.70
3037 3191 6.816960 AGGTATTATAGATACCCAAGCCTCT 58.183 40.000 10.72 0.00 43.85 3.69
3038 3192 7.951911 AGGTATTATAGATACCCAAGCCTCTA 58.048 38.462 10.72 0.00 43.85 2.43
3039 3193 8.579259 AGGTATTATAGATACCCAAGCCTCTAT 58.421 37.037 10.72 0.00 43.85 1.98
3040 3194 9.878737 GGTATTATAGATACCCAAGCCTCTATA 57.121 37.037 4.25 0.00 38.42 1.31
3046 3200 7.532459 AGATACCCAAGCCTCTATATCTAGA 57.468 40.000 0.00 0.00 29.66 2.43
3047 3201 7.945278 AGATACCCAAGCCTCTATATCTAGAA 58.055 38.462 0.00 0.00 33.59 2.10
3048 3202 8.402683 AGATACCCAAGCCTCTATATCTAGAAA 58.597 37.037 0.00 0.00 33.59 2.52
3049 3203 9.207868 GATACCCAAGCCTCTATATCTAGAAAT 57.792 37.037 0.00 0.00 33.59 2.17
3050 3204 7.880265 ACCCAAGCCTCTATATCTAGAAATT 57.120 36.000 0.00 0.00 33.59 1.82
3051 3205 8.281529 ACCCAAGCCTCTATATCTAGAAATTT 57.718 34.615 0.00 0.00 33.59 1.82
3052 3206 8.728098 ACCCAAGCCTCTATATCTAGAAATTTT 58.272 33.333 0.00 0.00 33.59 1.82
3053 3207 9.579932 CCCAAGCCTCTATATCTAGAAATTTTT 57.420 33.333 0.00 0.00 33.59 1.94
3072 3226 3.985019 TTTCGCTATGAGGTTAACCCA 57.015 42.857 21.30 17.93 36.42 4.51
3073 3227 2.973694 TCGCTATGAGGTTAACCCAC 57.026 50.000 21.30 15.53 36.42 4.61
3074 3228 2.463752 TCGCTATGAGGTTAACCCACT 58.536 47.619 21.30 8.22 36.42 4.00
3075 3229 2.835764 TCGCTATGAGGTTAACCCACTT 59.164 45.455 21.30 14.96 36.42 3.16
3076 3230 2.936498 CGCTATGAGGTTAACCCACTTG 59.064 50.000 21.30 10.13 36.42 3.16
3077 3231 3.279434 GCTATGAGGTTAACCCACTTGG 58.721 50.000 21.30 15.13 41.37 3.61
3089 3243 2.024176 CCACTTGGGTGAATAGGACG 57.976 55.000 0.00 0.00 45.61 4.79
3090 3244 1.278127 CCACTTGGGTGAATAGGACGT 59.722 52.381 0.00 0.00 45.61 4.34
3091 3245 2.618053 CACTTGGGTGAATAGGACGTC 58.382 52.381 7.13 7.13 45.61 4.34
3092 3246 2.233922 CACTTGGGTGAATAGGACGTCT 59.766 50.000 16.46 4.12 45.61 4.18
3093 3247 3.446161 CACTTGGGTGAATAGGACGTCTA 59.554 47.826 16.46 6.36 45.61 2.59
3094 3248 3.700038 ACTTGGGTGAATAGGACGTCTAG 59.300 47.826 16.46 0.00 0.00 2.43
3095 3249 3.657398 TGGGTGAATAGGACGTCTAGA 57.343 47.619 16.46 1.05 0.00 2.43
3096 3250 3.285484 TGGGTGAATAGGACGTCTAGAC 58.715 50.000 16.46 13.18 0.00 2.59
3097 3251 2.622470 GGGTGAATAGGACGTCTAGACC 59.378 54.545 17.23 12.23 34.82 3.85
3098 3252 3.553904 GGTGAATAGGACGTCTAGACCT 58.446 50.000 17.23 11.11 46.43 3.85
3100 3254 4.514816 GGTGAATAGGACGTCTAGACCTAC 59.485 50.000 17.23 6.64 46.84 3.18
3101 3255 4.210955 GTGAATAGGACGTCTAGACCTACG 59.789 50.000 17.23 8.65 46.84 3.51
3102 3256 2.898729 TAGGACGTCTAGACCTACGG 57.101 55.000 17.23 5.29 43.07 4.02
3103 3257 1.198713 AGGACGTCTAGACCTACGGA 58.801 55.000 17.23 0.00 43.07 4.69
3104 3258 1.556911 AGGACGTCTAGACCTACGGAA 59.443 52.381 17.23 0.00 43.07 4.30
3105 3259 2.172293 AGGACGTCTAGACCTACGGAAT 59.828 50.000 17.23 0.00 43.07 3.01
3106 3260 2.290093 GGACGTCTAGACCTACGGAATG 59.710 54.545 17.23 2.42 43.25 2.67
3107 3261 3.201290 GACGTCTAGACCTACGGAATGA 58.799 50.000 17.23 0.00 43.25 2.57
3108 3262 3.204526 ACGTCTAGACCTACGGAATGAG 58.795 50.000 17.23 1.20 43.25 2.90
3109 3263 3.118482 ACGTCTAGACCTACGGAATGAGA 60.118 47.826 17.23 0.00 43.25 3.27
3110 3264 3.495377 CGTCTAGACCTACGGAATGAGAG 59.505 52.174 17.23 0.00 35.51 3.20
3111 3265 3.251487 GTCTAGACCTACGGAATGAGAGC 59.749 52.174 12.13 0.00 0.00 4.09
3112 3266 2.145397 AGACCTACGGAATGAGAGCA 57.855 50.000 0.00 0.00 0.00 4.26
3113 3267 1.751924 AGACCTACGGAATGAGAGCAC 59.248 52.381 0.00 0.00 0.00 4.40
3114 3268 0.456221 ACCTACGGAATGAGAGCACG 59.544 55.000 0.00 0.00 0.00 5.34
3115 3269 0.456221 CCTACGGAATGAGAGCACGT 59.544 55.000 0.00 0.00 41.10 4.49
3116 3270 1.550065 CTACGGAATGAGAGCACGTG 58.450 55.000 12.28 12.28 38.34 4.49
3117 3271 0.885879 TACGGAATGAGAGCACGTGT 59.114 50.000 18.38 3.69 38.34 4.49
3118 3272 0.885879 ACGGAATGAGAGCACGTGTA 59.114 50.000 18.38 0.00 36.32 2.90
3119 3273 1.476891 ACGGAATGAGAGCACGTGTAT 59.523 47.619 18.38 6.24 36.32 2.29
3120 3274 2.094182 ACGGAATGAGAGCACGTGTATT 60.094 45.455 18.38 10.07 36.32 1.89
3121 3275 3.129813 ACGGAATGAGAGCACGTGTATTA 59.870 43.478 18.38 0.53 36.32 0.98
3122 3276 4.109766 CGGAATGAGAGCACGTGTATTAA 58.890 43.478 18.38 0.95 0.00 1.40
3123 3277 4.565166 CGGAATGAGAGCACGTGTATTAAA 59.435 41.667 18.38 0.00 0.00 1.52
3124 3278 5.234329 CGGAATGAGAGCACGTGTATTAAAT 59.766 40.000 18.38 1.84 0.00 1.40
3125 3279 6.238103 CGGAATGAGAGCACGTGTATTAAATT 60.238 38.462 18.38 10.31 0.00 1.82
3126 3280 6.907212 GGAATGAGAGCACGTGTATTAAATTG 59.093 38.462 18.38 0.00 0.00 2.32
3127 3281 5.794687 TGAGAGCACGTGTATTAAATTGG 57.205 39.130 18.38 0.00 0.00 3.16
3128 3282 5.242434 TGAGAGCACGTGTATTAAATTGGT 58.758 37.500 18.38 0.00 0.00 3.67
3129 3283 6.399743 TGAGAGCACGTGTATTAAATTGGTA 58.600 36.000 18.38 0.00 0.00 3.25
3130 3284 6.533723 TGAGAGCACGTGTATTAAATTGGTAG 59.466 38.462 18.38 0.00 0.00 3.18
3131 3285 5.815740 AGAGCACGTGTATTAAATTGGTAGG 59.184 40.000 18.38 0.00 0.00 3.18
3132 3286 4.334481 AGCACGTGTATTAAATTGGTAGGC 59.666 41.667 18.38 0.00 0.00 3.93
3133 3287 4.334481 GCACGTGTATTAAATTGGTAGGCT 59.666 41.667 18.38 0.00 0.00 4.58
3134 3288 5.729454 GCACGTGTATTAAATTGGTAGGCTG 60.729 44.000 18.38 0.00 0.00 4.85
3135 3289 4.879545 ACGTGTATTAAATTGGTAGGCTGG 59.120 41.667 0.00 0.00 0.00 4.85
3136 3290 5.120399 CGTGTATTAAATTGGTAGGCTGGA 58.880 41.667 0.00 0.00 0.00 3.86
3137 3291 5.236478 CGTGTATTAAATTGGTAGGCTGGAG 59.764 44.000 0.00 0.00 0.00 3.86
3138 3292 5.531287 GTGTATTAAATTGGTAGGCTGGAGG 59.469 44.000 0.00 0.00 0.00 4.30
3139 3293 3.662759 TTAAATTGGTAGGCTGGAGGG 57.337 47.619 0.00 0.00 0.00 4.30
3140 3294 1.382914 AAATTGGTAGGCTGGAGGGT 58.617 50.000 0.00 0.00 0.00 4.34
3141 3295 2.280308 AATTGGTAGGCTGGAGGGTA 57.720 50.000 0.00 0.00 0.00 3.69
3142 3296 1.807814 ATTGGTAGGCTGGAGGGTAG 58.192 55.000 0.00 0.00 0.00 3.18
3143 3297 0.714180 TTGGTAGGCTGGAGGGTAGA 59.286 55.000 0.00 0.00 0.00 2.59
3144 3298 0.261991 TGGTAGGCTGGAGGGTAGAG 59.738 60.000 0.00 0.00 0.00 2.43
3145 3299 0.556747 GGTAGGCTGGAGGGTAGAGA 59.443 60.000 0.00 0.00 0.00 3.10
3146 3300 1.063114 GGTAGGCTGGAGGGTAGAGAA 60.063 57.143 0.00 0.00 0.00 2.87
3147 3301 2.033372 GTAGGCTGGAGGGTAGAGAAC 58.967 57.143 0.00 0.00 0.00 3.01
3148 3302 0.684805 AGGCTGGAGGGTAGAGAACG 60.685 60.000 0.00 0.00 0.00 3.95
3149 3303 0.971447 GGCTGGAGGGTAGAGAACGT 60.971 60.000 0.00 0.00 0.00 3.99
3150 3304 0.456628 GCTGGAGGGTAGAGAACGTC 59.543 60.000 0.00 0.00 0.00 4.34
3151 3305 1.956159 GCTGGAGGGTAGAGAACGTCT 60.956 57.143 0.00 0.00 39.59 4.18
3152 3306 2.683152 GCTGGAGGGTAGAGAACGTCTA 60.683 54.545 0.00 0.00 36.64 2.59
3153 3307 3.207778 CTGGAGGGTAGAGAACGTCTAG 58.792 54.545 0.00 0.00 38.52 2.43
3154 3308 2.575279 TGGAGGGTAGAGAACGTCTAGT 59.425 50.000 0.00 0.00 38.52 2.57
3155 3309 2.944349 GGAGGGTAGAGAACGTCTAGTG 59.056 54.545 0.00 0.00 38.52 2.74
3156 3310 2.944349 GAGGGTAGAGAACGTCTAGTGG 59.056 54.545 0.00 0.00 38.52 4.00
3157 3311 1.404748 GGGTAGAGAACGTCTAGTGGC 59.595 57.143 0.00 0.00 38.52 5.01
3158 3312 1.063764 GGTAGAGAACGTCTAGTGGCG 59.936 57.143 0.00 0.00 38.52 5.69
3159 3313 0.731417 TAGAGAACGTCTAGTGGCGC 59.269 55.000 0.00 0.00 36.64 6.53
3160 3314 0.961358 AGAGAACGTCTAGTGGCGCT 60.961 55.000 7.64 5.62 31.71 5.92
3161 3315 0.731417 GAGAACGTCTAGTGGCGCTA 59.269 55.000 7.64 7.67 0.00 4.26
3162 3316 0.733729 AGAACGTCTAGTGGCGCTAG 59.266 55.000 25.56 25.56 46.59 3.42
3163 3317 0.248539 GAACGTCTAGTGGCGCTAGG 60.249 60.000 29.28 19.00 45.55 3.02
3164 3318 2.026301 CGTCTAGTGGCGCTAGGC 59.974 66.667 29.28 27.59 46.21 3.93
3165 3319 3.527641 GTCTAGTGGCGCTAGGCT 58.472 61.111 27.70 0.00 46.19 4.58
3166 3320 1.817209 GTCTAGTGGCGCTAGGCTT 59.183 57.895 27.70 0.00 46.19 4.35
3167 3321 0.528684 GTCTAGTGGCGCTAGGCTTG 60.529 60.000 27.70 8.46 46.19 4.01
3168 3322 1.884926 CTAGTGGCGCTAGGCTTGC 60.885 63.158 24.19 11.03 42.63 4.01
3178 3332 3.427161 GCTAGGCTTGCGATCAAAATT 57.573 42.857 4.95 0.00 0.00 1.82
3179 3333 3.774066 GCTAGGCTTGCGATCAAAATTT 58.226 40.909 4.95 0.00 0.00 1.82
3180 3334 3.793492 GCTAGGCTTGCGATCAAAATTTC 59.207 43.478 4.95 0.00 0.00 2.17
3181 3335 3.236632 AGGCTTGCGATCAAAATTTCC 57.763 42.857 0.00 0.00 0.00 3.13
3182 3336 2.827921 AGGCTTGCGATCAAAATTTCCT 59.172 40.909 0.00 0.00 0.00 3.36
3183 3337 2.925563 GGCTTGCGATCAAAATTTCCTG 59.074 45.455 0.00 0.00 0.00 3.86
3184 3338 3.367292 GGCTTGCGATCAAAATTTCCTGA 60.367 43.478 0.00 0.00 0.00 3.86
3185 3339 4.236935 GCTTGCGATCAAAATTTCCTGAA 58.763 39.130 0.00 0.00 0.00 3.02
3186 3340 4.090498 GCTTGCGATCAAAATTTCCTGAAC 59.910 41.667 0.00 0.00 0.00 3.18
3187 3341 3.820689 TGCGATCAAAATTTCCTGAACG 58.179 40.909 14.62 14.62 39.85 3.95
3188 3342 3.252215 TGCGATCAAAATTTCCTGAACGT 59.748 39.130 18.06 0.00 39.29 3.99
3189 3343 3.603770 GCGATCAAAATTTCCTGAACGTG 59.396 43.478 18.06 1.43 39.29 4.49
3190 3344 3.603770 CGATCAAAATTTCCTGAACGTGC 59.396 43.478 12.02 0.00 34.35 5.34
3191 3345 4.613622 CGATCAAAATTTCCTGAACGTGCT 60.614 41.667 12.02 0.00 34.35 4.40
3192 3346 4.223320 TCAAAATTTCCTGAACGTGCTC 57.777 40.909 0.00 0.00 0.00 4.26
3193 3347 3.004315 TCAAAATTTCCTGAACGTGCTCC 59.996 43.478 0.00 0.00 0.00 4.70
3194 3348 2.270352 AATTTCCTGAACGTGCTCCA 57.730 45.000 0.00 0.00 0.00 3.86
3195 3349 1.523758 ATTTCCTGAACGTGCTCCAC 58.476 50.000 0.00 0.00 0.00 4.02
3205 3359 1.790387 GTGCTCCACGATTCTGTGC 59.210 57.895 0.00 0.00 38.55 4.57
3206 3360 1.737735 TGCTCCACGATTCTGTGCG 60.738 57.895 0.00 0.00 38.55 5.34
3207 3361 1.738099 GCTCCACGATTCTGTGCGT 60.738 57.895 0.00 0.00 42.11 5.24
3211 3365 4.284123 ACGATTCTGTGCGTGCAT 57.716 50.000 0.00 0.00 39.56 3.96
3212 3366 2.543578 ACGATTCTGTGCGTGCATT 58.456 47.368 0.00 0.00 39.56 3.56
3213 3367 0.874390 ACGATTCTGTGCGTGCATTT 59.126 45.000 0.00 0.00 39.56 2.32
3214 3368 2.073056 ACGATTCTGTGCGTGCATTTA 58.927 42.857 0.00 0.00 39.56 1.40
3215 3369 2.094258 ACGATTCTGTGCGTGCATTTAG 59.906 45.455 0.00 0.00 39.56 1.85
3216 3370 2.444351 GATTCTGTGCGTGCATTTAGC 58.556 47.619 0.00 0.00 45.96 3.09
3232 3386 7.463469 GCATTTAGCAAACTTTGTTACTTGT 57.537 32.000 3.48 0.00 44.79 3.16
3233 3387 7.336975 GCATTTAGCAAACTTTGTTACTTGTG 58.663 34.615 3.48 0.74 44.79 3.33
3234 3388 7.516627 GCATTTAGCAAACTTTGTTACTTGTGG 60.517 37.037 3.48 0.00 44.79 4.17
3235 3389 4.385358 AGCAAACTTTGTTACTTGTGGG 57.615 40.909 3.48 0.00 0.00 4.61
3236 3390 2.863740 GCAAACTTTGTTACTTGTGGGC 59.136 45.455 3.48 0.00 0.00 5.36
3237 3391 3.453424 CAAACTTTGTTACTTGTGGGCC 58.547 45.455 0.00 0.00 0.00 5.80
3238 3392 2.445682 ACTTTGTTACTTGTGGGCCA 57.554 45.000 0.00 0.00 0.00 5.36
3239 3393 2.957474 ACTTTGTTACTTGTGGGCCAT 58.043 42.857 10.70 0.00 0.00 4.40
3240 3394 2.890945 ACTTTGTTACTTGTGGGCCATC 59.109 45.455 10.70 4.10 0.00 3.51
3241 3395 1.917872 TTGTTACTTGTGGGCCATCC 58.082 50.000 10.70 0.00 0.00 3.51
3242 3396 1.072266 TGTTACTTGTGGGCCATCCT 58.928 50.000 10.70 0.00 36.20 3.24
3243 3397 2.270858 TGTTACTTGTGGGCCATCCTA 58.729 47.619 10.70 0.00 36.20 2.94
3244 3398 2.026636 TGTTACTTGTGGGCCATCCTAC 60.027 50.000 10.70 4.53 43.46 3.18
3245 3399 1.209621 TACTTGTGGGCCATCCTACC 58.790 55.000 10.70 0.00 42.60 3.18
3246 3400 1.153168 CTTGTGGGCCATCCTACCG 60.153 63.158 10.70 0.00 42.60 4.02
3247 3401 3.338275 TTGTGGGCCATCCTACCGC 62.338 63.158 10.70 0.00 42.60 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 1.710996 TTGAGGGTTCGGCCTGGAAA 61.711 55.000 0.00 0.00 37.43 3.13
765 810 2.535788 CCGTTTTTGGCCGACGTGA 61.536 57.895 16.15 0.00 35.17 4.35
1674 1812 4.984295 TCCATTTGTCAAGATGTTGGAGA 58.016 39.130 2.33 0.00 34.09 3.71
1730 1869 7.392393 CACTATCATCCATTTTGAGCATATCCA 59.608 37.037 0.00 0.00 0.00 3.41
2026 2168 0.182061 GCCATGAGCTCCTTCCATGA 59.818 55.000 12.15 0.00 39.86 3.07
2158 2300 2.032528 CGATGCACCACCACCAGT 59.967 61.111 0.00 0.00 0.00 4.00
2434 2581 3.227614 GGCCTTCAAACCCTCAAAACTA 58.772 45.455 0.00 0.00 0.00 2.24
2650 2804 4.521062 CAAGGAGAGGCTCGCCGG 62.521 72.222 28.10 21.19 41.52 6.13
2651 2805 4.521062 CCAAGGAGAGGCTCGCCG 62.521 72.222 28.10 16.67 41.52 6.46
2652 2806 2.860972 GAACCAAGGAGAGGCTCGCC 62.861 65.000 27.57 27.57 36.52 5.54
2653 2807 1.448717 GAACCAAGGAGAGGCTCGC 60.449 63.158 10.01 10.01 0.00 5.03
2654 2808 0.108424 CAGAACCAAGGAGAGGCTCG 60.108 60.000 9.22 0.00 0.00 5.03
2655 2809 1.066502 GTCAGAACCAAGGAGAGGCTC 60.067 57.143 6.34 6.34 0.00 4.70
2656 2810 0.980423 GTCAGAACCAAGGAGAGGCT 59.020 55.000 0.00 0.00 0.00 4.58
2657 2811 0.035915 GGTCAGAACCAAGGAGAGGC 60.036 60.000 0.00 0.00 45.68 4.70
2658 2812 0.247736 CGGTCAGAACCAAGGAGAGG 59.752 60.000 0.00 0.00 46.86 3.69
2659 2813 0.969894 ACGGTCAGAACCAAGGAGAG 59.030 55.000 0.00 0.00 46.86 3.20
2660 2814 0.966920 GACGGTCAGAACCAAGGAGA 59.033 55.000 2.62 0.00 46.86 3.71
2661 2815 0.388649 CGACGGTCAGAACCAAGGAG 60.389 60.000 9.10 0.00 46.86 3.69
2662 2816 1.663739 CGACGGTCAGAACCAAGGA 59.336 57.895 9.10 0.00 46.86 3.36
2663 2817 1.374252 CCGACGGTCAGAACCAAGG 60.374 63.158 5.48 0.00 46.86 3.61
2664 2818 2.027625 GCCGACGGTCAGAACCAAG 61.028 63.158 16.73 0.00 46.86 3.61
2665 2819 2.029964 GCCGACGGTCAGAACCAA 59.970 61.111 16.73 0.00 46.86 3.67
2666 2820 4.351938 CGCCGACGGTCAGAACCA 62.352 66.667 16.73 0.00 46.86 3.67
2667 2821 4.353437 ACGCCGACGGTCAGAACC 62.353 66.667 16.73 0.00 46.04 3.62
2668 2822 3.103911 CACGCCGACGGTCAGAAC 61.104 66.667 16.73 0.00 46.04 3.01
2669 2823 4.351938 CCACGCCGACGGTCAGAA 62.352 66.667 16.73 0.00 46.04 3.02
2704 2858 1.476488 GTCAGAACCAGAGGAGCTCTC 59.524 57.143 14.64 9.23 38.99 3.20
2705 2859 1.555967 GTCAGAACCAGAGGAGCTCT 58.444 55.000 14.64 0.00 42.11 4.09
2706 2860 0.534873 GGTCAGAACCAGAGGAGCTC 59.465 60.000 4.71 4.71 45.68 4.09
2707 2861 1.254284 CGGTCAGAACCAGAGGAGCT 61.254 60.000 0.00 0.00 46.86 4.09
2708 2862 1.216710 CGGTCAGAACCAGAGGAGC 59.783 63.158 0.00 0.00 46.86 4.70
2709 2863 1.216710 GCGGTCAGAACCAGAGGAG 59.783 63.158 0.00 0.00 46.86 3.69
2710 2864 2.283529 GGCGGTCAGAACCAGAGGA 61.284 63.158 0.00 0.00 46.86 3.71
2711 2865 2.266055 GGCGGTCAGAACCAGAGG 59.734 66.667 0.00 0.00 46.86 3.69
2712 2866 2.125912 CGGCGGTCAGAACCAGAG 60.126 66.667 0.00 0.00 46.86 3.35
2713 2867 3.691342 CCGGCGGTCAGAACCAGA 61.691 66.667 19.97 0.00 46.86 3.86
2726 2880 2.938086 AAATTTTCCCCACGCCGGC 61.938 57.895 19.07 19.07 0.00 6.13
2727 2881 1.080161 CAAATTTTCCCCACGCCGG 60.080 57.895 0.00 0.00 0.00 6.13
2728 2882 1.080161 CCAAATTTTCCCCACGCCG 60.080 57.895 0.00 0.00 0.00 6.46
2729 2883 1.295101 CCCAAATTTTCCCCACGCC 59.705 57.895 0.00 0.00 0.00 5.68
2730 2884 1.295101 CCCCAAATTTTCCCCACGC 59.705 57.895 0.00 0.00 0.00 5.34
2731 2885 0.543174 TCCCCCAAATTTTCCCCACG 60.543 55.000 0.00 0.00 0.00 4.94
2732 2886 1.735926 TTCCCCCAAATTTTCCCCAC 58.264 50.000 0.00 0.00 0.00 4.61
2733 2887 2.089925 TCTTTCCCCCAAATTTTCCCCA 60.090 45.455 0.00 0.00 0.00 4.96
2734 2888 2.626785 TCTTTCCCCCAAATTTTCCCC 58.373 47.619 0.00 0.00 0.00 4.81
2735 2889 3.843619 TCATCTTTCCCCCAAATTTTCCC 59.156 43.478 0.00 0.00 0.00 3.97
2736 2890 4.532126 AGTCATCTTTCCCCCAAATTTTCC 59.468 41.667 0.00 0.00 0.00 3.13
2737 2891 5.745312 AGTCATCTTTCCCCCAAATTTTC 57.255 39.130 0.00 0.00 0.00 2.29
2738 2892 5.185056 CGTAGTCATCTTTCCCCCAAATTTT 59.815 40.000 0.00 0.00 0.00 1.82
2739 2893 4.705023 CGTAGTCATCTTTCCCCCAAATTT 59.295 41.667 0.00 0.00 0.00 1.82
2740 2894 4.270008 CGTAGTCATCTTTCCCCCAAATT 58.730 43.478 0.00 0.00 0.00 1.82
2741 2895 3.371595 CCGTAGTCATCTTTCCCCCAAAT 60.372 47.826 0.00 0.00 0.00 2.32
2742 2896 2.026636 CCGTAGTCATCTTTCCCCCAAA 60.027 50.000 0.00 0.00 0.00 3.28
2743 2897 1.557832 CCGTAGTCATCTTTCCCCCAA 59.442 52.381 0.00 0.00 0.00 4.12
2744 2898 1.200519 CCGTAGTCATCTTTCCCCCA 58.799 55.000 0.00 0.00 0.00 4.96
2745 2899 1.492764 TCCGTAGTCATCTTTCCCCC 58.507 55.000 0.00 0.00 0.00 5.40
2746 2900 3.622166 TTTCCGTAGTCATCTTTCCCC 57.378 47.619 0.00 0.00 0.00 4.81
2747 2901 5.429130 AGATTTTCCGTAGTCATCTTTCCC 58.571 41.667 0.00 0.00 0.00 3.97
2748 2902 6.371825 ACAAGATTTTCCGTAGTCATCTTTCC 59.628 38.462 0.00 0.00 32.91 3.13
2749 2903 7.365840 ACAAGATTTTCCGTAGTCATCTTTC 57.634 36.000 0.00 0.00 32.91 2.62
2750 2904 7.745620 AACAAGATTTTCCGTAGTCATCTTT 57.254 32.000 0.00 0.00 32.91 2.52
2751 2905 7.745620 AAACAAGATTTTCCGTAGTCATCTT 57.254 32.000 0.00 0.00 35.08 2.40
2752 2906 7.745620 AAAACAAGATTTTCCGTAGTCATCT 57.254 32.000 0.00 0.00 0.00 2.90
2776 2930 3.429135 GCGTGAACCCACCAAAGTAAAAA 60.429 43.478 0.00 0.00 40.12 1.94
2777 2931 2.099427 GCGTGAACCCACCAAAGTAAAA 59.901 45.455 0.00 0.00 40.12 1.52
2778 2932 1.677052 GCGTGAACCCACCAAAGTAAA 59.323 47.619 0.00 0.00 40.12 2.01
2779 2933 1.310904 GCGTGAACCCACCAAAGTAA 58.689 50.000 0.00 0.00 40.12 2.24
2780 2934 0.180642 TGCGTGAACCCACCAAAGTA 59.819 50.000 0.00 0.00 40.12 2.24
2781 2935 1.077357 TGCGTGAACCCACCAAAGT 60.077 52.632 0.00 0.00 40.12 2.66
2782 2936 1.358759 GTGCGTGAACCCACCAAAG 59.641 57.895 0.00 0.00 40.12 2.77
2783 2937 2.473760 CGTGCGTGAACCCACCAAA 61.474 57.895 0.00 0.00 40.12 3.28
2784 2938 2.897846 CGTGCGTGAACCCACCAA 60.898 61.111 0.00 0.00 40.12 3.67
2785 2939 3.800685 CTCGTGCGTGAACCCACCA 62.801 63.158 0.00 0.00 40.12 4.17
2786 2940 3.041940 CTCGTGCGTGAACCCACC 61.042 66.667 0.00 0.00 40.12 4.61
2787 2941 3.041940 CCTCGTGCGTGAACCCAC 61.042 66.667 0.00 0.00 39.86 4.61
2788 2942 3.542676 ACCTCGTGCGTGAACCCA 61.543 61.111 0.00 0.00 0.00 4.51
2789 2943 3.041940 CACCTCGTGCGTGAACCC 61.042 66.667 1.38 0.00 32.77 4.11
2790 2944 3.041940 CCACCTCGTGCGTGAACC 61.042 66.667 7.41 0.00 32.77 3.62
2791 2945 1.885850 AACCACCTCGTGCGTGAAC 60.886 57.895 7.41 0.00 32.77 3.18
2792 2946 1.885388 CAACCACCTCGTGCGTGAA 60.885 57.895 7.41 0.00 32.77 3.18
2793 2947 2.279851 CAACCACCTCGTGCGTGA 60.280 61.111 7.41 0.00 32.77 4.35
2794 2948 2.587753 ACAACCACCTCGTGCGTG 60.588 61.111 0.00 0.00 31.34 5.34
2795 2949 2.279918 GACAACCACCTCGTGCGT 60.280 61.111 0.00 0.00 31.34 5.24
2796 2950 3.041940 GGACAACCACCTCGTGCG 61.042 66.667 0.00 0.00 35.97 5.34
2797 2951 1.668151 GAGGACAACCACCTCGTGC 60.668 63.158 0.00 0.00 43.25 5.34
2798 2952 4.675404 GAGGACAACCACCTCGTG 57.325 61.111 0.00 0.00 43.25 4.35
2802 2956 1.807814 ACAGAAGAGGACAACCACCT 58.192 50.000 0.00 0.00 40.80 4.00
2803 2957 2.633481 AGTACAGAAGAGGACAACCACC 59.367 50.000 0.00 0.00 38.94 4.61
2804 2958 3.574826 AGAGTACAGAAGAGGACAACCAC 59.425 47.826 0.00 0.00 38.94 4.16
2805 2959 3.574396 CAGAGTACAGAAGAGGACAACCA 59.426 47.826 0.00 0.00 38.94 3.67
2806 2960 3.574826 ACAGAGTACAGAAGAGGACAACC 59.425 47.826 0.00 0.00 0.00 3.77
2807 2961 4.857509 ACAGAGTACAGAAGAGGACAAC 57.142 45.455 0.00 0.00 0.00 3.32
2808 2962 4.765856 GGTACAGAGTACAGAAGAGGACAA 59.234 45.833 9.27 0.00 0.00 3.18
2809 2963 4.333690 GGTACAGAGTACAGAAGAGGACA 58.666 47.826 9.27 0.00 0.00 4.02
2810 2964 3.374678 CGGTACAGAGTACAGAAGAGGAC 59.625 52.174 9.27 0.00 0.00 3.85
2811 2965 3.607741 CGGTACAGAGTACAGAAGAGGA 58.392 50.000 9.27 0.00 0.00 3.71
2812 2966 2.097791 GCGGTACAGAGTACAGAAGAGG 59.902 54.545 10.81 0.00 0.00 3.69
2813 2967 3.011119 AGCGGTACAGAGTACAGAAGAG 58.989 50.000 10.81 0.00 0.00 2.85
2814 2968 3.069079 AGCGGTACAGAGTACAGAAGA 57.931 47.619 10.81 0.00 0.00 2.87
2815 2969 3.242804 GCTAGCGGTACAGAGTACAGAAG 60.243 52.174 10.81 8.15 0.00 2.85
2816 2970 2.681848 GCTAGCGGTACAGAGTACAGAA 59.318 50.000 10.81 0.00 0.00 3.02
2817 2971 2.286872 GCTAGCGGTACAGAGTACAGA 58.713 52.381 10.81 0.00 0.00 3.41
2818 2972 1.003759 CGCTAGCGGTACAGAGTACAG 60.004 57.143 29.29 6.40 35.56 2.74
2819 2973 1.012086 CGCTAGCGGTACAGAGTACA 58.988 55.000 29.29 0.00 35.56 2.90
2820 2974 1.261089 CTCGCTAGCGGTACAGAGTAC 59.739 57.143 34.76 0.00 40.25 2.73
2821 2975 1.134580 ACTCGCTAGCGGTACAGAGTA 60.135 52.381 34.76 12.91 37.21 2.59
2822 2976 0.392729 ACTCGCTAGCGGTACAGAGT 60.393 55.000 34.76 25.77 40.25 3.24
2823 2977 0.028242 CACTCGCTAGCGGTACAGAG 59.972 60.000 34.76 25.13 40.25 3.35
2824 2978 0.392060 TCACTCGCTAGCGGTACAGA 60.392 55.000 34.76 22.02 40.25 3.41
2825 2979 0.450583 TTCACTCGCTAGCGGTACAG 59.549 55.000 34.76 26.17 40.25 2.74
2826 2980 0.169672 GTTCACTCGCTAGCGGTACA 59.830 55.000 34.76 16.29 40.25 2.90
2827 2981 0.860618 CGTTCACTCGCTAGCGGTAC 60.861 60.000 34.76 23.30 40.25 3.34
2828 2982 1.300971 ACGTTCACTCGCTAGCGGTA 61.301 55.000 34.76 17.43 40.25 4.02
2829 2983 2.138656 AACGTTCACTCGCTAGCGGT 62.139 55.000 34.76 27.12 40.25 5.68
2830 2984 1.403972 GAACGTTCACTCGCTAGCGG 61.404 60.000 34.76 26.49 40.25 5.52
2831 2985 1.721257 CGAACGTTCACTCGCTAGCG 61.721 60.000 30.91 30.91 41.35 4.26
2832 2986 1.403972 CCGAACGTTCACTCGCTAGC 61.404 60.000 26.71 4.06 33.70 3.42
2833 2987 0.109873 ACCGAACGTTCACTCGCTAG 60.110 55.000 26.71 8.62 33.70 3.42
2834 2988 0.311790 AACCGAACGTTCACTCGCTA 59.688 50.000 26.71 0.00 33.70 4.26
2835 2989 1.066918 AACCGAACGTTCACTCGCT 59.933 52.632 26.71 0.00 33.70 4.93
2836 2990 3.621520 AACCGAACGTTCACTCGC 58.378 55.556 26.71 0.56 33.70 5.03
2843 2997 2.030451 GTGTAGAGGAGAACCGAACGTT 60.030 50.000 0.00 0.00 41.83 3.99
2844 2998 1.538950 GTGTAGAGGAGAACCGAACGT 59.461 52.381 0.00 0.00 41.83 3.99
2845 2999 1.811359 AGTGTAGAGGAGAACCGAACG 59.189 52.381 0.00 0.00 41.83 3.95
2846 3000 2.094649 CCAGTGTAGAGGAGAACCGAAC 60.095 54.545 0.00 0.00 41.83 3.95
2847 3001 2.168496 CCAGTGTAGAGGAGAACCGAA 58.832 52.381 0.00 0.00 41.83 4.30
2848 3002 1.075050 ACCAGTGTAGAGGAGAACCGA 59.925 52.381 0.00 0.00 41.83 4.69
2849 3003 1.546961 ACCAGTGTAGAGGAGAACCG 58.453 55.000 0.00 0.00 41.83 4.44
2850 3004 4.082136 CAGTTACCAGTGTAGAGGAGAACC 60.082 50.000 0.00 0.00 0.00 3.62
2851 3005 4.765856 TCAGTTACCAGTGTAGAGGAGAAC 59.234 45.833 0.00 0.00 0.00 3.01
2852 3006 4.994282 TCAGTTACCAGTGTAGAGGAGAA 58.006 43.478 0.00 0.00 0.00 2.87
2853 3007 4.652679 TCAGTTACCAGTGTAGAGGAGA 57.347 45.455 0.00 0.00 0.00 3.71
2854 3008 4.035792 CGATCAGTTACCAGTGTAGAGGAG 59.964 50.000 0.00 0.00 0.00 3.69
2855 3009 3.945921 CGATCAGTTACCAGTGTAGAGGA 59.054 47.826 0.00 0.00 0.00 3.71
2856 3010 3.489398 GCGATCAGTTACCAGTGTAGAGG 60.489 52.174 0.00 0.00 0.00 3.69
2857 3011 3.378742 AGCGATCAGTTACCAGTGTAGAG 59.621 47.826 0.00 0.00 0.00 2.43
2858 3012 3.128764 CAGCGATCAGTTACCAGTGTAGA 59.871 47.826 0.00 0.00 0.00 2.59
2859 3013 3.128764 TCAGCGATCAGTTACCAGTGTAG 59.871 47.826 0.00 0.00 0.00 2.74
2860 3014 3.086282 TCAGCGATCAGTTACCAGTGTA 58.914 45.455 0.00 0.00 0.00 2.90
2861 3015 1.893137 TCAGCGATCAGTTACCAGTGT 59.107 47.619 0.00 0.00 0.00 3.55
2862 3016 2.534298 CTCAGCGATCAGTTACCAGTG 58.466 52.381 0.00 0.00 0.00 3.66
2863 3017 1.478510 CCTCAGCGATCAGTTACCAGT 59.521 52.381 0.00 0.00 0.00 4.00
2864 3018 1.478510 ACCTCAGCGATCAGTTACCAG 59.521 52.381 0.00 0.00 0.00 4.00
2865 3019 1.204704 CACCTCAGCGATCAGTTACCA 59.795 52.381 0.00 0.00 0.00 3.25
2866 3020 1.471676 CCACCTCAGCGATCAGTTACC 60.472 57.143 0.00 0.00 0.00 2.85
2867 3021 1.927895 CCACCTCAGCGATCAGTTAC 58.072 55.000 0.00 0.00 0.00 2.50
2868 3022 0.175760 GCCACCTCAGCGATCAGTTA 59.824 55.000 0.00 0.00 0.00 2.24
2869 3023 1.078848 GCCACCTCAGCGATCAGTT 60.079 57.895 0.00 0.00 0.00 3.16
2870 3024 2.581354 GCCACCTCAGCGATCAGT 59.419 61.111 0.00 0.00 0.00 3.41
2877 3031 1.227205 CAGAGATCGCCACCTCAGC 60.227 63.158 0.00 0.00 32.07 4.26
2878 3032 1.227205 GCAGAGATCGCCACCTCAG 60.227 63.158 0.00 0.00 32.07 3.35
2879 3033 1.984026 TGCAGAGATCGCCACCTCA 60.984 57.895 0.00 0.00 32.07 3.86
2880 3034 1.520342 GTGCAGAGATCGCCACCTC 60.520 63.158 0.00 0.00 0.00 3.85
2881 3035 1.986757 AGTGCAGAGATCGCCACCT 60.987 57.895 0.00 0.00 0.00 4.00
2882 3036 1.812922 CAGTGCAGAGATCGCCACC 60.813 63.158 0.00 0.00 0.00 4.61
2883 3037 2.459442 GCAGTGCAGAGATCGCCAC 61.459 63.158 11.09 0.00 0.00 5.01
2884 3038 2.125391 GCAGTGCAGAGATCGCCA 60.125 61.111 11.09 0.00 0.00 5.69
2885 3039 2.172372 CAGCAGTGCAGAGATCGCC 61.172 63.158 19.20 0.00 0.00 5.54
2886 3040 0.738762 TTCAGCAGTGCAGAGATCGC 60.739 55.000 19.20 0.00 0.00 4.58
2887 3041 0.997932 GTTCAGCAGTGCAGAGATCG 59.002 55.000 19.20 0.00 0.00 3.69
2888 3042 2.383368 AGTTCAGCAGTGCAGAGATC 57.617 50.000 19.20 10.87 0.00 2.75
2889 3043 2.812591 CAAAGTTCAGCAGTGCAGAGAT 59.187 45.455 19.20 4.31 0.00 2.75
2890 3044 2.216046 CAAAGTTCAGCAGTGCAGAGA 58.784 47.619 19.20 9.35 0.00 3.10
2891 3045 1.266175 CCAAAGTTCAGCAGTGCAGAG 59.734 52.381 19.20 6.90 0.00 3.35
2892 3046 1.311859 CCAAAGTTCAGCAGTGCAGA 58.688 50.000 19.20 12.67 0.00 4.26
2893 3047 1.027357 ACCAAAGTTCAGCAGTGCAG 58.973 50.000 19.20 9.98 0.00 4.41
2894 3048 1.134753 CAACCAAAGTTCAGCAGTGCA 59.865 47.619 19.20 0.00 32.45 4.57
2895 3049 1.536709 CCAACCAAAGTTCAGCAGTGC 60.537 52.381 7.13 7.13 32.45 4.40
2896 3050 1.750778 ACCAACCAAAGTTCAGCAGTG 59.249 47.619 0.00 0.00 32.45 3.66
2897 3051 2.024414 GACCAACCAAAGTTCAGCAGT 58.976 47.619 0.00 0.00 32.45 4.40
2898 3052 1.338020 GGACCAACCAAAGTTCAGCAG 59.662 52.381 0.00 0.00 38.79 4.24
2899 3053 1.398692 GGACCAACCAAAGTTCAGCA 58.601 50.000 0.00 0.00 38.79 4.41
2900 3054 0.673985 GGGACCAACCAAAGTTCAGC 59.326 55.000 0.00 0.00 41.20 4.26
2901 3055 1.681264 GTGGGACCAACCAAAGTTCAG 59.319 52.381 0.00 0.00 43.34 3.02
2902 3056 1.286553 AGTGGGACCAACCAAAGTTCA 59.713 47.619 0.00 0.00 43.34 3.18
2903 3057 2.067365 AGTGGGACCAACCAAAGTTC 57.933 50.000 0.00 0.00 43.34 3.01
2904 3058 2.512476 ACTAGTGGGACCAACCAAAGTT 59.488 45.455 0.00 0.00 43.34 2.66
2905 3059 2.132686 ACTAGTGGGACCAACCAAAGT 58.867 47.619 0.00 0.00 43.34 2.66
2906 3060 2.951229 ACTAGTGGGACCAACCAAAG 57.049 50.000 0.00 0.00 43.34 2.77
2907 3061 3.497227 GCTTACTAGTGGGACCAACCAAA 60.497 47.826 5.39 0.00 43.34 3.28
2908 3062 2.039348 GCTTACTAGTGGGACCAACCAA 59.961 50.000 5.39 0.00 43.34 3.67
2909 3063 1.626825 GCTTACTAGTGGGACCAACCA 59.373 52.381 5.39 0.00 41.20 3.67
2910 3064 1.065636 GGCTTACTAGTGGGACCAACC 60.066 57.143 5.39 0.00 38.08 3.77
2911 3065 1.405121 CGGCTTACTAGTGGGACCAAC 60.405 57.143 5.39 0.00 0.00 3.77
2912 3066 0.899720 CGGCTTACTAGTGGGACCAA 59.100 55.000 5.39 0.00 0.00 3.67
2913 3067 0.974010 CCGGCTTACTAGTGGGACCA 60.974 60.000 5.39 0.00 0.00 4.02
2914 3068 0.974525 ACCGGCTTACTAGTGGGACC 60.975 60.000 5.39 0.82 0.00 4.46
2915 3069 0.900421 AACCGGCTTACTAGTGGGAC 59.100 55.000 5.39 0.00 0.00 4.46
2916 3070 0.899720 CAACCGGCTTACTAGTGGGA 59.100 55.000 5.39 0.00 0.00 4.37
2917 3071 0.611714 ACAACCGGCTTACTAGTGGG 59.388 55.000 5.39 1.64 0.00 4.61
2918 3072 2.756760 TCTACAACCGGCTTACTAGTGG 59.243 50.000 5.39 0.00 0.00 4.00
2919 3073 4.445452 TTCTACAACCGGCTTACTAGTG 57.555 45.455 5.39 0.00 0.00 2.74
2920 3074 4.708421 TCATTCTACAACCGGCTTACTAGT 59.292 41.667 0.00 0.00 0.00 2.57
2921 3075 5.258456 TCATTCTACAACCGGCTTACTAG 57.742 43.478 0.00 0.00 0.00 2.57
2922 3076 5.361571 TCATCATTCTACAACCGGCTTACTA 59.638 40.000 0.00 0.00 0.00 1.82
2923 3077 4.161565 TCATCATTCTACAACCGGCTTACT 59.838 41.667 0.00 0.00 0.00 2.24
2924 3078 4.439057 TCATCATTCTACAACCGGCTTAC 58.561 43.478 0.00 0.00 0.00 2.34
2925 3079 4.746535 TCATCATTCTACAACCGGCTTA 57.253 40.909 0.00 0.00 0.00 3.09
2926 3080 3.627395 TCATCATTCTACAACCGGCTT 57.373 42.857 0.00 0.00 0.00 4.35
2927 3081 3.845781 ATCATCATTCTACAACCGGCT 57.154 42.857 0.00 0.00 0.00 5.52
2928 3082 4.393062 CCATATCATCATTCTACAACCGGC 59.607 45.833 0.00 0.00 0.00 6.13
2929 3083 4.393062 GCCATATCATCATTCTACAACCGG 59.607 45.833 0.00 0.00 0.00 5.28
2930 3084 4.091945 CGCCATATCATCATTCTACAACCG 59.908 45.833 0.00 0.00 0.00 4.44
2931 3085 5.237815 TCGCCATATCATCATTCTACAACC 58.762 41.667 0.00 0.00 0.00 3.77
2932 3086 6.591448 TGATCGCCATATCATCATTCTACAAC 59.409 38.462 0.00 0.00 30.92 3.32
2933 3087 6.700352 TGATCGCCATATCATCATTCTACAA 58.300 36.000 0.00 0.00 30.92 2.41
2934 3088 6.284891 TGATCGCCATATCATCATTCTACA 57.715 37.500 0.00 0.00 30.92 2.74
2935 3089 5.233902 GCTGATCGCCATATCATCATTCTAC 59.766 44.000 0.00 0.00 35.40 2.59
2936 3090 5.128335 AGCTGATCGCCATATCATCATTCTA 59.872 40.000 6.02 0.00 40.39 2.10
2937 3091 4.081031 AGCTGATCGCCATATCATCATTCT 60.081 41.667 6.02 0.00 40.39 2.40
2938 3092 4.034163 CAGCTGATCGCCATATCATCATTC 59.966 45.833 8.42 0.00 40.39 2.67
2939 3093 3.939592 CAGCTGATCGCCATATCATCATT 59.060 43.478 8.42 0.00 40.39 2.57
2940 3094 3.197116 TCAGCTGATCGCCATATCATCAT 59.803 43.478 13.74 0.00 40.39 2.45
2941 3095 2.564062 TCAGCTGATCGCCATATCATCA 59.436 45.455 13.74 0.00 40.39 3.07
2942 3096 3.242549 TCAGCTGATCGCCATATCATC 57.757 47.619 13.74 0.00 40.39 2.92
2943 3097 3.055312 ACATCAGCTGATCGCCATATCAT 60.055 43.478 26.44 0.00 40.39 2.45
2944 3098 2.301009 ACATCAGCTGATCGCCATATCA 59.699 45.455 26.44 0.00 40.39 2.15
2945 3099 2.671888 CACATCAGCTGATCGCCATATC 59.328 50.000 26.44 0.00 40.39 1.63
2946 3100 2.614734 CCACATCAGCTGATCGCCATAT 60.615 50.000 26.44 0.67 40.39 1.78
2947 3101 1.270465 CCACATCAGCTGATCGCCATA 60.270 52.381 26.44 0.00 40.39 2.74
2948 3102 0.534427 CCACATCAGCTGATCGCCAT 60.534 55.000 26.44 2.36 40.39 4.40
2949 3103 1.153309 CCACATCAGCTGATCGCCA 60.153 57.895 26.44 0.00 40.39 5.69
2950 3104 0.250209 ATCCACATCAGCTGATCGCC 60.250 55.000 26.44 0.00 40.39 5.54
2951 3105 2.335752 CTATCCACATCAGCTGATCGC 58.664 52.381 26.44 1.92 39.57 4.58
2952 3106 2.930023 GCCTATCCACATCAGCTGATCG 60.930 54.545 26.44 21.78 31.21 3.69
2953 3107 2.302445 AGCCTATCCACATCAGCTGATC 59.698 50.000 26.44 11.75 31.21 2.92
2954 3108 2.336891 AGCCTATCCACATCAGCTGAT 58.663 47.619 23.75 23.75 34.56 2.90
2955 3109 1.798626 AGCCTATCCACATCAGCTGA 58.201 50.000 20.79 20.79 0.00 4.26
2956 3110 1.880271 CAGCCTATCCACATCAGCTG 58.120 55.000 7.63 7.63 41.43 4.24
2957 3111 0.108207 GCAGCCTATCCACATCAGCT 59.892 55.000 0.00 0.00 0.00 4.24
2958 3112 0.179037 TGCAGCCTATCCACATCAGC 60.179 55.000 0.00 0.00 0.00 4.26
2959 3113 2.563261 ATGCAGCCTATCCACATCAG 57.437 50.000 0.00 0.00 0.00 2.90
2960 3114 3.216800 GAAATGCAGCCTATCCACATCA 58.783 45.455 0.00 0.00 0.00 3.07
2961 3115 3.216800 TGAAATGCAGCCTATCCACATC 58.783 45.455 0.00 0.00 0.00 3.06
2962 3116 3.301794 TGAAATGCAGCCTATCCACAT 57.698 42.857 0.00 0.00 0.00 3.21
2963 3117 2.804986 TGAAATGCAGCCTATCCACA 57.195 45.000 0.00 0.00 0.00 4.17
2964 3118 4.454728 TTTTGAAATGCAGCCTATCCAC 57.545 40.909 0.00 0.00 0.00 4.02
2984 3138 7.385894 AGCTCATCTCCACTATCCTATTTTT 57.614 36.000 0.00 0.00 0.00 1.94
2985 3139 8.677870 ATAGCTCATCTCCACTATCCTATTTT 57.322 34.615 0.00 0.00 0.00 1.82
2986 3140 8.677870 AATAGCTCATCTCCACTATCCTATTT 57.322 34.615 0.00 0.00 0.00 1.40
2987 3141 8.677870 AAATAGCTCATCTCCACTATCCTATT 57.322 34.615 0.00 0.00 0.00 1.73
2988 3142 9.420118 CTAAATAGCTCATCTCCACTATCCTAT 57.580 37.037 0.00 0.00 0.00 2.57
2989 3143 7.836685 CCTAAATAGCTCATCTCCACTATCCTA 59.163 40.741 0.00 0.00 0.00 2.94
2990 3144 6.667414 CCTAAATAGCTCATCTCCACTATCCT 59.333 42.308 0.00 0.00 0.00 3.24
2991 3145 6.439058 ACCTAAATAGCTCATCTCCACTATCC 59.561 42.308 0.00 0.00 0.00 2.59
2992 3146 7.475137 ACCTAAATAGCTCATCTCCACTATC 57.525 40.000 0.00 0.00 0.00 2.08
2993 3147 9.554053 AATACCTAAATAGCTCATCTCCACTAT 57.446 33.333 0.00 0.00 0.00 2.12
2994 3148 8.958060 AATACCTAAATAGCTCATCTCCACTA 57.042 34.615 0.00 0.00 0.00 2.74
2995 3149 7.863901 AATACCTAAATAGCTCATCTCCACT 57.136 36.000 0.00 0.00 0.00 4.00
3009 3163 9.575957 AGGCTTGGGTATCTATAATACCTAAAT 57.424 33.333 12.30 2.33 42.12 1.40
3010 3164 8.984112 AGGCTTGGGTATCTATAATACCTAAA 57.016 34.615 12.30 7.94 42.12 1.85
3011 3165 8.407438 AGAGGCTTGGGTATCTATAATACCTAA 58.593 37.037 12.62 11.85 42.72 2.69
3012 3166 7.951911 AGAGGCTTGGGTATCTATAATACCTA 58.048 38.462 12.62 5.39 42.72 3.08
3013 3167 6.816960 AGAGGCTTGGGTATCTATAATACCT 58.183 40.000 12.62 0.00 42.72 3.08
3014 3168 8.785184 ATAGAGGCTTGGGTATCTATAATACC 57.215 38.462 5.79 5.79 42.47 2.73
3020 3174 9.243762 TCTAGATATAGAGGCTTGGGTATCTAT 57.756 37.037 14.57 7.47 38.30 1.98
3021 3175 8.640033 TCTAGATATAGAGGCTTGGGTATCTA 57.360 38.462 13.96 13.96 32.76 1.98
3022 3176 7.532459 TCTAGATATAGAGGCTTGGGTATCT 57.468 40.000 13.44 13.44 34.38 1.98
3023 3177 8.596781 TTTCTAGATATAGAGGCTTGGGTATC 57.403 38.462 0.00 0.00 0.00 2.24
3024 3178 9.567702 AATTTCTAGATATAGAGGCTTGGGTAT 57.432 33.333 0.00 0.00 0.00 2.73
3025 3179 8.974292 AATTTCTAGATATAGAGGCTTGGGTA 57.026 34.615 0.00 0.00 0.00 3.69
3026 3180 7.880265 AATTTCTAGATATAGAGGCTTGGGT 57.120 36.000 0.00 0.00 0.00 4.51
3027 3181 9.579932 AAAAATTTCTAGATATAGAGGCTTGGG 57.420 33.333 0.00 0.00 0.00 4.12
3050 3204 4.456566 GTGGGTTAACCTCATAGCGAAAAA 59.543 41.667 23.69 0.00 41.11 1.94
3051 3205 4.004982 GTGGGTTAACCTCATAGCGAAAA 58.995 43.478 23.69 0.00 41.11 2.29
3052 3206 3.262405 AGTGGGTTAACCTCATAGCGAAA 59.738 43.478 23.69 0.00 41.11 3.46
3053 3207 2.835764 AGTGGGTTAACCTCATAGCGAA 59.164 45.455 23.69 0.00 41.11 4.70
3054 3208 2.463752 AGTGGGTTAACCTCATAGCGA 58.536 47.619 23.69 0.00 41.11 4.93
3055 3209 2.936498 CAAGTGGGTTAACCTCATAGCG 59.064 50.000 23.69 3.96 41.11 4.26
3056 3210 3.279434 CCAAGTGGGTTAACCTCATAGC 58.721 50.000 23.69 6.97 41.11 2.97
3070 3224 1.278127 ACGTCCTATTCACCCAAGTGG 59.722 52.381 0.00 0.00 44.64 4.00
3071 3225 2.233922 AGACGTCCTATTCACCCAAGTG 59.766 50.000 13.01 0.00 46.00 3.16
3072 3226 2.537143 AGACGTCCTATTCACCCAAGT 58.463 47.619 13.01 0.00 0.00 3.16
3073 3227 3.952323 TCTAGACGTCCTATTCACCCAAG 59.048 47.826 13.01 0.00 0.00 3.61
3074 3228 3.698040 GTCTAGACGTCCTATTCACCCAA 59.302 47.826 13.01 0.00 0.00 4.12
3075 3229 3.285484 GTCTAGACGTCCTATTCACCCA 58.715 50.000 13.01 0.00 0.00 4.51
3076 3230 2.622470 GGTCTAGACGTCCTATTCACCC 59.378 54.545 16.56 0.00 0.00 4.61
3077 3231 3.553904 AGGTCTAGACGTCCTATTCACC 58.446 50.000 16.56 9.94 28.84 4.02
3078 3232 4.210955 CGTAGGTCTAGACGTCCTATTCAC 59.789 50.000 20.74 10.99 36.14 3.18
3079 3233 4.375272 CGTAGGTCTAGACGTCCTATTCA 58.625 47.826 20.74 0.00 36.14 2.57
3080 3234 4.988708 CGTAGGTCTAGACGTCCTATTC 57.011 50.000 20.74 2.55 36.14 1.75
3097 3251 1.135373 ACACGTGCTCTCATTCCGTAG 60.135 52.381 17.22 0.00 0.00 3.51
3098 3252 0.885879 ACACGTGCTCTCATTCCGTA 59.114 50.000 17.22 0.00 0.00 4.02
3099 3253 0.885879 TACACGTGCTCTCATTCCGT 59.114 50.000 17.22 0.00 0.00 4.69
3100 3254 2.209838 ATACACGTGCTCTCATTCCG 57.790 50.000 17.22 0.00 0.00 4.30
3101 3255 6.604735 ATTTAATACACGTGCTCTCATTCC 57.395 37.500 17.22 0.00 0.00 3.01
3102 3256 6.907212 CCAATTTAATACACGTGCTCTCATTC 59.093 38.462 17.22 0.00 0.00 2.67
3103 3257 6.374333 ACCAATTTAATACACGTGCTCTCATT 59.626 34.615 17.22 9.87 0.00 2.57
3104 3258 5.880332 ACCAATTTAATACACGTGCTCTCAT 59.120 36.000 17.22 0.00 0.00 2.90
3105 3259 5.242434 ACCAATTTAATACACGTGCTCTCA 58.758 37.500 17.22 0.00 0.00 3.27
3106 3260 5.796350 ACCAATTTAATACACGTGCTCTC 57.204 39.130 17.22 0.00 0.00 3.20
3107 3261 5.815740 CCTACCAATTTAATACACGTGCTCT 59.184 40.000 17.22 1.94 0.00 4.09
3108 3262 5.503520 GCCTACCAATTTAATACACGTGCTC 60.504 44.000 17.22 0.00 0.00 4.26
3109 3263 4.334481 GCCTACCAATTTAATACACGTGCT 59.666 41.667 17.22 5.64 0.00 4.40
3110 3264 4.334481 AGCCTACCAATTTAATACACGTGC 59.666 41.667 17.22 0.00 0.00 5.34
3111 3265 5.220777 CCAGCCTACCAATTTAATACACGTG 60.221 44.000 15.48 15.48 0.00 4.49
3112 3266 4.879545 CCAGCCTACCAATTTAATACACGT 59.120 41.667 0.00 0.00 0.00 4.49
3113 3267 5.120399 TCCAGCCTACCAATTTAATACACG 58.880 41.667 0.00 0.00 0.00 4.49
3114 3268 5.531287 CCTCCAGCCTACCAATTTAATACAC 59.469 44.000 0.00 0.00 0.00 2.90
3115 3269 5.398581 CCCTCCAGCCTACCAATTTAATACA 60.399 44.000 0.00 0.00 0.00 2.29
3116 3270 5.070685 CCCTCCAGCCTACCAATTTAATAC 58.929 45.833 0.00 0.00 0.00 1.89
3117 3271 4.729881 ACCCTCCAGCCTACCAATTTAATA 59.270 41.667 0.00 0.00 0.00 0.98
3118 3272 3.531814 ACCCTCCAGCCTACCAATTTAAT 59.468 43.478 0.00 0.00 0.00 1.40
3119 3273 2.923629 ACCCTCCAGCCTACCAATTTAA 59.076 45.455 0.00 0.00 0.00 1.52
3120 3274 2.568979 ACCCTCCAGCCTACCAATTTA 58.431 47.619 0.00 0.00 0.00 1.40
3121 3275 1.382914 ACCCTCCAGCCTACCAATTT 58.617 50.000 0.00 0.00 0.00 1.82
3122 3276 2.127708 CTACCCTCCAGCCTACCAATT 58.872 52.381 0.00 0.00 0.00 2.32
3123 3277 1.294068 TCTACCCTCCAGCCTACCAAT 59.706 52.381 0.00 0.00 0.00 3.16
3124 3278 0.714180 TCTACCCTCCAGCCTACCAA 59.286 55.000 0.00 0.00 0.00 3.67
3125 3279 0.261991 CTCTACCCTCCAGCCTACCA 59.738 60.000 0.00 0.00 0.00 3.25
3126 3280 0.556747 TCTCTACCCTCCAGCCTACC 59.443 60.000 0.00 0.00 0.00 3.18
3127 3281 2.033372 GTTCTCTACCCTCCAGCCTAC 58.967 57.143 0.00 0.00 0.00 3.18
3128 3282 1.409802 CGTTCTCTACCCTCCAGCCTA 60.410 57.143 0.00 0.00 0.00 3.93
3129 3283 0.684805 CGTTCTCTACCCTCCAGCCT 60.685 60.000 0.00 0.00 0.00 4.58
3130 3284 0.971447 ACGTTCTCTACCCTCCAGCC 60.971 60.000 0.00 0.00 0.00 4.85
3131 3285 0.456628 GACGTTCTCTACCCTCCAGC 59.543 60.000 0.00 0.00 0.00 4.85
3132 3286 2.131776 AGACGTTCTCTACCCTCCAG 57.868 55.000 0.00 0.00 0.00 3.86
3133 3287 2.575279 ACTAGACGTTCTCTACCCTCCA 59.425 50.000 0.00 0.00 0.00 3.86
3134 3288 2.944349 CACTAGACGTTCTCTACCCTCC 59.056 54.545 0.00 0.00 0.00 4.30
3135 3289 2.944349 CCACTAGACGTTCTCTACCCTC 59.056 54.545 0.00 0.00 0.00 4.30
3136 3290 2.944991 GCCACTAGACGTTCTCTACCCT 60.945 54.545 0.00 0.00 0.00 4.34
3137 3291 1.404748 GCCACTAGACGTTCTCTACCC 59.595 57.143 0.00 0.00 0.00 3.69
3138 3292 1.063764 CGCCACTAGACGTTCTCTACC 59.936 57.143 0.00 0.00 0.00 3.18
3139 3293 1.531470 GCGCCACTAGACGTTCTCTAC 60.531 57.143 0.00 0.00 0.00 2.59
3140 3294 0.731417 GCGCCACTAGACGTTCTCTA 59.269 55.000 0.00 0.00 0.00 2.43
3141 3295 0.961358 AGCGCCACTAGACGTTCTCT 60.961 55.000 2.29 0.00 0.00 3.10
3142 3296 0.731417 TAGCGCCACTAGACGTTCTC 59.269 55.000 2.29 0.00 0.00 2.87
3143 3297 2.864114 TAGCGCCACTAGACGTTCT 58.136 52.632 2.29 0.00 0.00 3.01
3150 3304 1.884926 GCAAGCCTAGCGCCACTAG 60.885 63.158 2.29 0.00 46.95 2.57
3151 3305 2.186903 GCAAGCCTAGCGCCACTA 59.813 61.111 2.29 0.00 38.78 2.74
3158 3312 3.427161 AATTTTGATCGCAAGCCTAGC 57.573 42.857 0.00 0.00 35.04 3.42
3159 3313 4.096984 AGGAAATTTTGATCGCAAGCCTAG 59.903 41.667 0.00 0.00 35.04 3.02
3160 3314 4.016444 AGGAAATTTTGATCGCAAGCCTA 58.984 39.130 0.00 0.00 35.04 3.93
3161 3315 2.827921 AGGAAATTTTGATCGCAAGCCT 59.172 40.909 0.00 0.00 35.04 4.58
3162 3316 2.925563 CAGGAAATTTTGATCGCAAGCC 59.074 45.455 0.00 0.00 35.04 4.35
3163 3317 3.836949 TCAGGAAATTTTGATCGCAAGC 58.163 40.909 0.00 0.00 35.04 4.01
3164 3318 4.321745 CGTTCAGGAAATTTTGATCGCAAG 59.678 41.667 9.28 0.00 35.04 4.01
3165 3319 4.225984 CGTTCAGGAAATTTTGATCGCAA 58.774 39.130 9.28 0.00 32.11 4.85
3166 3320 3.252215 ACGTTCAGGAAATTTTGATCGCA 59.748 39.130 17.25 0.00 39.09 5.10
3167 3321 3.603770 CACGTTCAGGAAATTTTGATCGC 59.396 43.478 17.25 3.12 39.09 4.58
3168 3322 3.603770 GCACGTTCAGGAAATTTTGATCG 59.396 43.478 16.32 16.32 40.49 3.69
3169 3323 4.798574 AGCACGTTCAGGAAATTTTGATC 58.201 39.130 0.00 0.00 0.00 2.92
3170 3324 4.321230 GGAGCACGTTCAGGAAATTTTGAT 60.321 41.667 0.00 0.00 0.00 2.57
3171 3325 3.004315 GGAGCACGTTCAGGAAATTTTGA 59.996 43.478 0.00 0.00 0.00 2.69
3172 3326 3.243367 TGGAGCACGTTCAGGAAATTTTG 60.243 43.478 0.00 0.00 0.00 2.44
3173 3327 2.955660 TGGAGCACGTTCAGGAAATTTT 59.044 40.909 0.00 0.00 0.00 1.82
3174 3328 2.293399 GTGGAGCACGTTCAGGAAATTT 59.707 45.455 0.00 0.00 0.00 1.82
3175 3329 1.880027 GTGGAGCACGTTCAGGAAATT 59.120 47.619 0.00 0.00 0.00 1.82
3176 3330 1.523758 GTGGAGCACGTTCAGGAAAT 58.476 50.000 0.00 0.00 0.00 2.17
3177 3331 3.000815 GTGGAGCACGTTCAGGAAA 57.999 52.632 0.00 0.00 0.00 3.13
3178 3332 4.771127 GTGGAGCACGTTCAGGAA 57.229 55.556 0.00 0.00 0.00 3.36
3187 3341 1.790387 GCACAGAATCGTGGAGCAC 59.210 57.895 7.18 0.00 37.37 4.40
3188 3342 1.737735 CGCACAGAATCGTGGAGCA 60.738 57.895 7.18 0.00 37.37 4.26
3189 3343 1.738099 ACGCACAGAATCGTGGAGC 60.738 57.895 7.18 0.00 37.55 4.70
3190 3344 4.578913 ACGCACAGAATCGTGGAG 57.421 55.556 7.18 0.00 37.55 3.86
3194 3348 0.874390 AAATGCACGCACAGAATCGT 59.126 45.000 0.00 0.00 39.79 3.73
3195 3349 2.697363 CTAAATGCACGCACAGAATCG 58.303 47.619 0.00 0.00 0.00 3.34
3196 3350 2.444351 GCTAAATGCACGCACAGAATC 58.556 47.619 0.00 0.00 42.31 2.52
3197 3351 2.549633 GCTAAATGCACGCACAGAAT 57.450 45.000 0.00 0.00 42.31 2.40
3208 3362 7.336975 CACAAGTAACAAAGTTTGCTAAATGC 58.663 34.615 15.59 1.56 43.25 3.56
3209 3363 7.042791 CCCACAAGTAACAAAGTTTGCTAAATG 60.043 37.037 15.59 11.69 0.00 2.32
3210 3364 6.983890 CCCACAAGTAACAAAGTTTGCTAAAT 59.016 34.615 15.59 0.00 0.00 1.40
3211 3365 6.334202 CCCACAAGTAACAAAGTTTGCTAAA 58.666 36.000 15.59 0.00 0.00 1.85
3212 3366 5.680151 GCCCACAAGTAACAAAGTTTGCTAA 60.680 40.000 15.59 0.00 0.00 3.09
3213 3367 4.202070 GCCCACAAGTAACAAAGTTTGCTA 60.202 41.667 15.59 5.04 0.00 3.49
3214 3368 3.430236 GCCCACAAGTAACAAAGTTTGCT 60.430 43.478 15.59 6.12 0.00 3.91
3215 3369 2.863740 GCCCACAAGTAACAAAGTTTGC 59.136 45.455 15.59 0.00 0.00 3.68
3216 3370 3.118956 TGGCCCACAAGTAACAAAGTTTG 60.119 43.478 14.13 14.13 0.00 2.93
3217 3371 3.100671 TGGCCCACAAGTAACAAAGTTT 58.899 40.909 0.00 0.00 0.00 2.66
3218 3372 2.741145 TGGCCCACAAGTAACAAAGTT 58.259 42.857 0.00 0.00 0.00 2.66
3219 3373 2.445682 TGGCCCACAAGTAACAAAGT 57.554 45.000 0.00 0.00 0.00 2.66
3220 3374 2.231235 GGATGGCCCACAAGTAACAAAG 59.769 50.000 0.00 0.00 34.14 2.77
3221 3375 2.158385 AGGATGGCCCACAAGTAACAAA 60.158 45.455 0.00 0.00 37.41 2.83
3222 3376 1.427368 AGGATGGCCCACAAGTAACAA 59.573 47.619 0.00 0.00 37.41 2.83
3223 3377 1.072266 AGGATGGCCCACAAGTAACA 58.928 50.000 0.00 0.00 37.41 2.41
3224 3378 2.640184 GTAGGATGGCCCACAAGTAAC 58.360 52.381 0.00 0.00 37.41 2.50
3225 3379 1.562475 GGTAGGATGGCCCACAAGTAA 59.438 52.381 0.00 0.00 37.41 2.24
3226 3380 1.209621 GGTAGGATGGCCCACAAGTA 58.790 55.000 0.00 0.00 37.41 2.24
3227 3381 1.910580 CGGTAGGATGGCCCACAAGT 61.911 60.000 0.00 0.00 37.41 3.16
3228 3382 1.153168 CGGTAGGATGGCCCACAAG 60.153 63.158 0.00 0.00 37.41 3.16
3229 3383 2.994699 CGGTAGGATGGCCCACAA 59.005 61.111 0.00 0.00 37.41 3.33
3230 3384 3.792736 GCGGTAGGATGGCCCACA 61.793 66.667 0.00 0.00 37.41 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.