Multiple sequence alignment - TraesCS7D01G475700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G475700 chr7D 100.000 2477 0 0 1 2477 587743907 587741431 0.000000e+00 4575.0
1 TraesCS7D01G475700 chr7D 86.923 780 89 3 694 1469 587727880 587727110 0.000000e+00 863.0
2 TraesCS7D01G475700 chr7D 93.421 304 17 3 1564 1866 587760692 587760391 4.860000e-122 448.0
3 TraesCS7D01G475700 chr7A 88.971 952 77 9 1535 2477 679530197 679529265 0.000000e+00 1151.0
4 TraesCS7D01G475700 chr7A 88.187 965 82 9 694 1640 679594212 679593262 0.000000e+00 1122.0
5 TraesCS7D01G475700 chr7A 89.059 786 70 3 694 1469 679531189 679530410 0.000000e+00 961.0
6 TraesCS7D01G475700 chr7A 86.726 791 88 8 684 1469 679389692 679390470 0.000000e+00 863.0
7 TraesCS7D01G475700 chr7A 86.538 780 92 4 694 1469 679526061 679526831 0.000000e+00 846.0
8 TraesCS7D01G475700 chr7A 86.522 230 24 4 1637 1866 679592951 679592729 1.900000e-61 246.0
9 TraesCS7D01G475700 chr7A 87.952 166 18 2 536 700 679113303 679113139 6.990000e-46 195.0
10 TraesCS7D01G475700 chr7B 90.513 780 61 3 694 1469 658889905 658889135 0.000000e+00 1018.0
11 TraesCS7D01G475700 chr7B 86.962 790 91 4 684 1469 658880832 658881613 0.000000e+00 878.0
12 TraesCS7D01G475700 chr7B 87.051 780 91 3 694 1469 658748266 658749039 0.000000e+00 872.0
13 TraesCS7D01G475700 chr7B 86.667 780 94 3 694 1469 658623101 658623874 0.000000e+00 856.0
14 TraesCS7D01G475700 chr1D 97.072 444 11 2 1 442 405096218 405095775 0.000000e+00 747.0
15 TraesCS7D01G475700 chr1D 96.622 444 11 4 1 442 96901682 96901241 0.000000e+00 734.0
16 TraesCS7D01G475700 chr1D 96.000 450 15 3 1 447 86891355 86890906 0.000000e+00 728.0
17 TraesCS7D01G475700 chr2D 96.847 444 12 2 1 442 78695488 78695045 0.000000e+00 741.0
18 TraesCS7D01G475700 chr2D 96.622 444 12 3 1 442 624333685 624333243 0.000000e+00 734.0
19 TraesCS7D01G475700 chr6D 96.847 444 10 4 1 442 448406561 448406120 0.000000e+00 739.0
20 TraesCS7D01G475700 chr6D 96.231 451 13 4 1 448 402960334 402960783 0.000000e+00 736.0
21 TraesCS7D01G475700 chr6D 96.622 444 12 3 1 442 446139456 446139898 0.000000e+00 734.0
22 TraesCS7D01G475700 chr4D 96.637 446 12 3 1 443 488471996 488471551 0.000000e+00 737.0
23 TraesCS7D01G475700 chrUn 74.895 239 41 14 458 690 92772942 92773167 9.430000e-15 91.6
24 TraesCS7D01G475700 chr6B 98.039 51 1 0 464 514 15261363 15261413 3.390000e-14 89.8
25 TraesCS7D01G475700 chr3D 94.828 58 2 1 464 521 8905985 8905929 3.390000e-14 89.8
26 TraesCS7D01G475700 chr3D 94.828 58 2 1 464 521 467784538 467784482 3.390000e-14 89.8
27 TraesCS7D01G475700 chr3D 93.103 58 3 1 464 521 73722056 73722000 1.580000e-12 84.2
28 TraesCS7D01G475700 chr2B 94.828 58 2 1 464 521 176699011 176699067 3.390000e-14 89.8
29 TraesCS7D01G475700 chr2B 90.625 64 5 1 458 521 157992028 157992090 1.580000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G475700 chr7D 587741431 587743907 2476 True 4575 4575 100.0000 1 2477 1 chr7D.!!$R2 2476
1 TraesCS7D01G475700 chr7D 587727110 587727880 770 True 863 863 86.9230 694 1469 1 chr7D.!!$R1 775
2 TraesCS7D01G475700 chr7A 679529265 679531189 1924 True 1056 1151 89.0150 694 2477 2 chr7A.!!$R2 1783
3 TraesCS7D01G475700 chr7A 679389692 679390470 778 False 863 863 86.7260 684 1469 1 chr7A.!!$F1 785
4 TraesCS7D01G475700 chr7A 679526061 679526831 770 False 846 846 86.5380 694 1469 1 chr7A.!!$F2 775
5 TraesCS7D01G475700 chr7A 679592729 679594212 1483 True 684 1122 87.3545 694 1866 2 chr7A.!!$R3 1172
6 TraesCS7D01G475700 chr7B 658889135 658889905 770 True 1018 1018 90.5130 694 1469 1 chr7B.!!$R1 775
7 TraesCS7D01G475700 chr7B 658880832 658881613 781 False 878 878 86.9620 684 1469 1 chr7B.!!$F3 785
8 TraesCS7D01G475700 chr7B 658748266 658749039 773 False 872 872 87.0510 694 1469 1 chr7B.!!$F2 775
9 TraesCS7D01G475700 chr7B 658623101 658623874 773 False 856 856 86.6670 694 1469 1 chr7B.!!$F1 775

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
98 99 0.031111 CCCTCCTCCACCATAGTCCA 60.031 60.0 0.0 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2027 2514 0.03779 GCGCTCTATCTGGGATGGTC 60.038 60.0 0.0 0.0 0.0 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.626825 TGCTCCTTTATATACGGGGGC 59.373 52.381 14.80 14.80 44.87 5.80
21 22 1.626825 GCTCCTTTATATACGGGGGCA 59.373 52.381 16.12 0.00 44.12 5.36
22 23 2.354805 GCTCCTTTATATACGGGGGCAG 60.355 54.545 16.12 3.07 44.12 4.85
23 24 2.236395 CTCCTTTATATACGGGGGCAGG 59.764 54.545 0.00 0.00 0.00 4.85
24 25 1.280998 CCTTTATATACGGGGGCAGGG 59.719 57.143 0.00 0.00 0.00 4.45
25 26 1.280998 CTTTATATACGGGGGCAGGGG 59.719 57.143 0.00 0.00 0.00 4.79
26 27 0.548197 TTATATACGGGGGCAGGGGG 60.548 60.000 0.00 0.00 0.00 5.40
44 45 3.534721 GGCACCCTAGAGACACAAC 57.465 57.895 0.00 0.00 0.00 3.32
45 46 0.685097 GGCACCCTAGAGACACAACA 59.315 55.000 0.00 0.00 0.00 3.33
46 47 1.071699 GGCACCCTAGAGACACAACAA 59.928 52.381 0.00 0.00 0.00 2.83
47 48 2.290323 GGCACCCTAGAGACACAACAAT 60.290 50.000 0.00 0.00 0.00 2.71
48 49 3.412386 GCACCCTAGAGACACAACAATT 58.588 45.455 0.00 0.00 0.00 2.32
49 50 3.189287 GCACCCTAGAGACACAACAATTG 59.811 47.826 3.24 3.24 0.00 2.32
50 51 4.641396 CACCCTAGAGACACAACAATTGA 58.359 43.478 13.59 0.00 0.00 2.57
51 52 5.248640 CACCCTAGAGACACAACAATTGAT 58.751 41.667 13.59 0.00 0.00 2.57
52 53 5.352569 CACCCTAGAGACACAACAATTGATC 59.647 44.000 13.59 1.75 0.00 2.92
53 54 4.568359 CCCTAGAGACACAACAATTGATCG 59.432 45.833 13.59 2.22 0.00 3.69
54 55 5.171476 CCTAGAGACACAACAATTGATCGT 58.829 41.667 13.59 3.40 0.00 3.73
55 56 5.639506 CCTAGAGACACAACAATTGATCGTT 59.360 40.000 13.59 0.00 0.00 3.85
56 57 6.147821 CCTAGAGACACAACAATTGATCGTTT 59.852 38.462 13.59 0.00 0.00 3.60
57 58 5.751680 AGAGACACAACAATTGATCGTTTG 58.248 37.500 13.59 8.26 0.00 2.93
58 59 5.527214 AGAGACACAACAATTGATCGTTTGA 59.473 36.000 13.59 0.00 0.00 2.69
59 60 6.205464 AGAGACACAACAATTGATCGTTTGAT 59.795 34.615 13.59 0.34 37.60 2.57
70 71 4.859629 GATCGTTTGATCTTTTAGCCGT 57.140 40.909 0.00 0.00 46.22 5.68
71 72 4.578601 GATCGTTTGATCTTTTAGCCGTG 58.421 43.478 0.00 0.00 46.22 4.94
72 73 3.395639 TCGTTTGATCTTTTAGCCGTGT 58.604 40.909 0.00 0.00 0.00 4.49
73 74 3.185594 TCGTTTGATCTTTTAGCCGTGTG 59.814 43.478 0.00 0.00 0.00 3.82
74 75 3.234386 GTTTGATCTTTTAGCCGTGTGC 58.766 45.455 0.00 0.00 41.71 4.57
93 94 4.066614 GTGCCCTCCTCCACCATA 57.933 61.111 0.00 0.00 0.00 2.74
94 95 1.832912 GTGCCCTCCTCCACCATAG 59.167 63.158 0.00 0.00 0.00 2.23
95 96 0.983378 GTGCCCTCCTCCACCATAGT 60.983 60.000 0.00 0.00 0.00 2.12
96 97 0.691078 TGCCCTCCTCCACCATAGTC 60.691 60.000 0.00 0.00 0.00 2.59
97 98 1.411651 GCCCTCCTCCACCATAGTCC 61.412 65.000 0.00 0.00 0.00 3.85
98 99 0.031111 CCCTCCTCCACCATAGTCCA 60.031 60.000 0.00 0.00 0.00 4.02
99 100 1.123928 CCTCCTCCACCATAGTCCAC 58.876 60.000 0.00 0.00 0.00 4.02
100 101 1.123928 CTCCTCCACCATAGTCCACC 58.876 60.000 0.00 0.00 0.00 4.61
101 102 0.716591 TCCTCCACCATAGTCCACCT 59.283 55.000 0.00 0.00 0.00 4.00
102 103 1.123928 CCTCCACCATAGTCCACCTC 58.876 60.000 0.00 0.00 0.00 3.85
103 104 0.747255 CTCCACCATAGTCCACCTCG 59.253 60.000 0.00 0.00 0.00 4.63
104 105 0.333652 TCCACCATAGTCCACCTCGA 59.666 55.000 0.00 0.00 0.00 4.04
105 106 1.063190 TCCACCATAGTCCACCTCGAT 60.063 52.381 0.00 0.00 0.00 3.59
106 107 2.176148 TCCACCATAGTCCACCTCGATA 59.824 50.000 0.00 0.00 0.00 2.92
107 108 2.963101 CCACCATAGTCCACCTCGATAA 59.037 50.000 0.00 0.00 0.00 1.75
108 109 3.578716 CCACCATAGTCCACCTCGATAAT 59.421 47.826 0.00 0.00 0.00 1.28
109 110 4.770531 CCACCATAGTCCACCTCGATAATA 59.229 45.833 0.00 0.00 0.00 0.98
110 111 5.336531 CCACCATAGTCCACCTCGATAATAC 60.337 48.000 0.00 0.00 0.00 1.89
111 112 5.477291 CACCATAGTCCACCTCGATAATACT 59.523 44.000 0.00 0.00 0.00 2.12
112 113 5.477291 ACCATAGTCCACCTCGATAATACTG 59.523 44.000 0.00 0.00 0.00 2.74
113 114 5.477291 CCATAGTCCACCTCGATAATACTGT 59.523 44.000 0.00 0.00 0.00 3.55
114 115 6.657966 CCATAGTCCACCTCGATAATACTGTA 59.342 42.308 0.00 0.00 0.00 2.74
115 116 7.148222 CCATAGTCCACCTCGATAATACTGTAG 60.148 44.444 0.00 0.00 0.00 2.74
116 117 4.519730 AGTCCACCTCGATAATACTGTAGC 59.480 45.833 0.00 0.00 0.00 3.58
117 118 3.501062 TCCACCTCGATAATACTGTAGCG 59.499 47.826 0.00 0.00 34.27 4.26
118 119 3.366070 CCACCTCGATAATACTGTAGCGG 60.366 52.174 0.00 0.00 33.79 5.52
119 120 3.252701 CACCTCGATAATACTGTAGCGGT 59.747 47.826 0.00 0.00 33.79 5.68
120 121 3.252701 ACCTCGATAATACTGTAGCGGTG 59.747 47.826 0.00 0.00 33.79 4.94
121 122 3.235195 CTCGATAATACTGTAGCGGTGC 58.765 50.000 0.00 0.00 33.79 5.01
122 123 2.882761 TCGATAATACTGTAGCGGTGCT 59.117 45.455 3.95 0.00 43.41 4.40
123 124 3.317149 TCGATAATACTGTAGCGGTGCTT 59.683 43.478 3.95 0.00 40.44 3.91
124 125 4.516321 TCGATAATACTGTAGCGGTGCTTA 59.484 41.667 3.95 0.00 40.44 3.09
125 126 4.852104 CGATAATACTGTAGCGGTGCTTAG 59.148 45.833 3.95 0.00 40.44 2.18
126 127 3.454371 AATACTGTAGCGGTGCTTAGG 57.546 47.619 3.95 0.00 40.44 2.69
127 128 0.458669 TACTGTAGCGGTGCTTAGGC 59.541 55.000 3.95 0.00 40.44 3.93
128 129 1.878522 CTGTAGCGGTGCTTAGGCG 60.879 63.158 3.95 0.00 40.44 5.52
129 130 2.279502 CTGTAGCGGTGCTTAGGCGA 62.280 60.000 3.95 0.00 40.44 5.54
130 131 1.153706 GTAGCGGTGCTTAGGCGAA 60.154 57.895 0.00 0.00 40.44 4.70
131 132 1.141019 TAGCGGTGCTTAGGCGAAG 59.859 57.895 2.68 2.68 40.44 3.79
145 146 2.202756 GAAGCCCTGCGTCGGTAG 60.203 66.667 0.00 0.00 0.00 3.18
146 147 2.678934 AAGCCCTGCGTCGGTAGA 60.679 61.111 0.00 0.00 0.00 2.59
147 148 2.221906 GAAGCCCTGCGTCGGTAGAA 62.222 60.000 0.00 0.00 0.00 2.10
148 149 2.502692 AAGCCCTGCGTCGGTAGAAC 62.503 60.000 0.00 0.00 0.00 3.01
149 150 2.967397 CCCTGCGTCGGTAGAACA 59.033 61.111 0.00 0.00 0.00 3.18
150 151 1.515954 CCCTGCGTCGGTAGAACAT 59.484 57.895 0.00 0.00 0.00 2.71
151 152 0.527817 CCCTGCGTCGGTAGAACATC 60.528 60.000 0.00 0.00 0.00 3.06
152 153 0.172578 CCTGCGTCGGTAGAACATCA 59.827 55.000 0.00 0.00 0.00 3.07
153 154 1.202417 CCTGCGTCGGTAGAACATCAT 60.202 52.381 0.00 0.00 0.00 2.45
154 155 2.120232 CTGCGTCGGTAGAACATCATC 58.880 52.381 0.00 0.00 0.00 2.92
155 156 1.474879 TGCGTCGGTAGAACATCATCA 59.525 47.619 0.00 0.00 0.00 3.07
156 157 2.100749 TGCGTCGGTAGAACATCATCAT 59.899 45.455 0.00 0.00 0.00 2.45
157 158 2.726760 GCGTCGGTAGAACATCATCATC 59.273 50.000 0.00 0.00 0.00 2.92
158 159 2.973879 CGTCGGTAGAACATCATCATCG 59.026 50.000 0.00 0.00 0.00 3.84
159 160 3.548214 CGTCGGTAGAACATCATCATCGT 60.548 47.826 0.00 0.00 0.00 3.73
160 161 3.975670 GTCGGTAGAACATCATCATCGTC 59.024 47.826 0.00 0.00 0.00 4.20
161 162 3.630312 TCGGTAGAACATCATCATCGTCA 59.370 43.478 0.00 0.00 0.00 4.35
162 163 3.731216 CGGTAGAACATCATCATCGTCAC 59.269 47.826 0.00 0.00 0.00 3.67
163 164 4.051922 GGTAGAACATCATCATCGTCACC 58.948 47.826 0.00 0.00 0.00 4.02
164 165 3.893326 AGAACATCATCATCGTCACCA 57.107 42.857 0.00 0.00 0.00 4.17
165 166 3.525537 AGAACATCATCATCGTCACCAC 58.474 45.455 0.00 0.00 0.00 4.16
167 168 0.578683 CATCATCATCGTCACCACGC 59.421 55.000 0.00 0.00 46.28 5.34
168 169 0.530650 ATCATCATCGTCACCACGCC 60.531 55.000 0.00 0.00 46.28 5.68
169 170 2.202743 ATCATCGTCACCACGCCG 60.203 61.111 0.00 0.00 46.28 6.46
170 171 3.001902 ATCATCGTCACCACGCCGT 62.002 57.895 0.00 0.00 46.28 5.68
171 172 2.884087 ATCATCGTCACCACGCCGTC 62.884 60.000 0.00 0.00 46.28 4.79
172 173 4.771356 ATCGTCACCACGCCGTCG 62.771 66.667 0.00 0.00 46.28 5.12
193 194 3.921677 GTGTTGACGAAACTATCCCTCA 58.078 45.455 0.00 0.00 39.70 3.86
194 195 4.312443 GTGTTGACGAAACTATCCCTCAA 58.688 43.478 0.00 0.00 39.70 3.02
195 196 4.151867 GTGTTGACGAAACTATCCCTCAAC 59.848 45.833 0.00 0.00 39.99 3.18
196 197 4.202274 TGTTGACGAAACTATCCCTCAACA 60.202 41.667 6.88 6.88 43.38 3.33
197 198 3.921677 TGACGAAACTATCCCTCAACAC 58.078 45.455 0.00 0.00 0.00 3.32
198 199 3.576982 TGACGAAACTATCCCTCAACACT 59.423 43.478 0.00 0.00 0.00 3.55
199 200 4.174762 GACGAAACTATCCCTCAACACTC 58.825 47.826 0.00 0.00 0.00 3.51
200 201 3.179830 CGAAACTATCCCTCAACACTCG 58.820 50.000 0.00 0.00 0.00 4.18
201 202 3.522553 GAAACTATCCCTCAACACTCGG 58.477 50.000 0.00 0.00 0.00 4.63
202 203 0.824759 ACTATCCCTCAACACTCGGC 59.175 55.000 0.00 0.00 0.00 5.54
203 204 1.115467 CTATCCCTCAACACTCGGCT 58.885 55.000 0.00 0.00 0.00 5.52
204 205 0.824109 TATCCCTCAACACTCGGCTG 59.176 55.000 0.00 0.00 0.00 4.85
205 206 1.903877 ATCCCTCAACACTCGGCTGG 61.904 60.000 0.00 0.00 0.00 4.85
206 207 2.583441 CCCTCAACACTCGGCTGGA 61.583 63.158 0.00 0.00 0.00 3.86
207 208 1.599047 CCTCAACACTCGGCTGGAT 59.401 57.895 0.00 0.00 0.00 3.41
208 209 0.460987 CCTCAACACTCGGCTGGATC 60.461 60.000 0.00 0.00 0.00 3.36
209 210 0.803768 CTCAACACTCGGCTGGATCG 60.804 60.000 0.00 0.00 0.00 3.69
210 211 1.811266 CAACACTCGGCTGGATCGG 60.811 63.158 0.00 0.00 0.00 4.18
211 212 1.982395 AACACTCGGCTGGATCGGA 60.982 57.895 0.00 0.00 0.00 4.55
212 213 1.949847 AACACTCGGCTGGATCGGAG 61.950 60.000 0.00 0.00 38.77 4.63
213 214 2.043852 ACTCGGCTGGATCGGAGT 60.044 61.111 0.00 0.00 40.39 3.85
214 215 1.682684 ACTCGGCTGGATCGGAGTT 60.683 57.895 0.00 0.00 41.80 3.01
215 216 1.066587 CTCGGCTGGATCGGAGTTC 59.933 63.158 0.00 0.00 0.00 3.01
216 217 2.278857 CGGCTGGATCGGAGTTCG 60.279 66.667 0.00 0.00 40.90 3.95
224 225 2.033141 TCGGAGTTCGAGGGACGT 59.967 61.111 0.00 0.00 43.74 4.34
225 226 2.037136 TCGGAGTTCGAGGGACGTC 61.037 63.158 7.13 7.13 43.74 4.34
226 227 2.330372 CGGAGTTCGAGGGACGTCA 61.330 63.158 18.91 0.00 42.43 4.35
227 228 1.654954 CGGAGTTCGAGGGACGTCAT 61.655 60.000 18.91 4.87 42.43 3.06
228 229 0.100861 GGAGTTCGAGGGACGTCATC 59.899 60.000 18.91 13.48 43.13 2.92
229 230 0.248134 GAGTTCGAGGGACGTCATCG 60.248 60.000 27.08 27.08 43.13 3.84
230 231 0.675837 AGTTCGAGGGACGTCATCGA 60.676 55.000 29.82 29.82 43.19 3.59
231 232 0.248134 GTTCGAGGGACGTCATCGAG 60.248 60.000 30.77 16.93 45.23 4.04
232 233 1.989966 TTCGAGGGACGTCATCGAGC 61.990 60.000 30.77 10.93 45.23 5.03
233 234 2.473760 CGAGGGACGTCATCGAGCT 61.474 63.158 28.32 3.30 38.72 4.09
234 235 1.064946 GAGGGACGTCATCGAGCTG 59.935 63.158 18.91 0.00 40.62 4.24
235 236 1.377366 GAGGGACGTCATCGAGCTGA 61.377 60.000 18.91 0.00 40.62 4.26
236 237 0.965866 AGGGACGTCATCGAGCTGAA 60.966 55.000 18.91 0.00 40.62 3.02
237 238 0.802607 GGGACGTCATCGAGCTGAAC 60.803 60.000 18.91 0.00 40.62 3.18
238 239 1.134530 GGACGTCATCGAGCTGAACG 61.135 60.000 18.91 0.00 40.62 3.95
239 240 0.454620 GACGTCATCGAGCTGAACGT 60.455 55.000 11.55 12.62 40.62 3.99
240 241 0.729478 ACGTCATCGAGCTGAACGTG 60.729 55.000 12.23 3.66 40.62 4.49
241 242 0.729478 CGTCATCGAGCTGAACGTGT 60.729 55.000 0.00 0.00 39.71 4.49
242 243 0.710567 GTCATCGAGCTGAACGTGTG 59.289 55.000 0.00 0.00 0.00 3.82
243 244 1.008875 TCATCGAGCTGAACGTGTGC 61.009 55.000 0.00 0.00 0.00 4.57
244 245 1.010935 CATCGAGCTGAACGTGTGCT 61.011 55.000 9.46 9.46 40.02 4.40
245 246 1.010935 ATCGAGCTGAACGTGTGCTG 61.011 55.000 13.62 7.51 37.16 4.41
246 247 1.661509 CGAGCTGAACGTGTGCTGA 60.662 57.895 13.62 0.00 37.16 4.26
247 248 1.215014 CGAGCTGAACGTGTGCTGAA 61.215 55.000 13.62 0.00 37.16 3.02
248 249 0.233332 GAGCTGAACGTGTGCTGAAC 59.767 55.000 13.62 0.00 37.16 3.18
249 250 0.179073 AGCTGAACGTGTGCTGAACT 60.179 50.000 8.99 0.00 35.54 3.01
250 251 0.233332 GCTGAACGTGTGCTGAACTC 59.767 55.000 0.00 0.00 0.00 3.01
254 255 3.848142 CGTGTGCTGAACTCGGAG 58.152 61.111 2.83 2.83 41.05 4.63
255 256 1.734477 CGTGTGCTGAACTCGGAGG 60.734 63.158 10.23 0.00 41.05 4.30
256 257 1.367840 GTGTGCTGAACTCGGAGGT 59.632 57.895 10.23 1.51 0.00 3.85
257 258 0.946221 GTGTGCTGAACTCGGAGGTG 60.946 60.000 10.23 0.00 0.00 4.00
258 259 2.029844 GTGCTGAACTCGGAGGTGC 61.030 63.158 10.23 4.15 0.00 5.01
259 260 2.435059 GCTGAACTCGGAGGTGCC 60.435 66.667 10.23 0.00 0.00 5.01
275 276 3.152703 CCGTGCGTTCGGTACTTG 58.847 61.111 11.17 0.00 44.77 3.16
276 277 1.372004 CCGTGCGTTCGGTACTTGA 60.372 57.895 11.17 0.00 44.77 3.02
277 278 1.611592 CCGTGCGTTCGGTACTTGAC 61.612 60.000 11.17 0.00 44.77 3.18
278 279 1.611592 CGTGCGTTCGGTACTTGACC 61.612 60.000 0.00 0.00 45.91 4.02
285 286 3.685435 GGTACTTGACCGGTCGGA 58.315 61.111 28.70 18.78 38.87 4.55
286 287 2.196319 GGTACTTGACCGGTCGGAT 58.804 57.895 28.70 18.26 38.87 4.18
287 288 0.101939 GGTACTTGACCGGTCGGATC 59.898 60.000 28.70 16.92 38.87 3.36
288 289 0.248377 GTACTTGACCGGTCGGATCG 60.248 60.000 28.70 16.55 38.96 3.69
289 290 0.677731 TACTTGACCGGTCGGATCGT 60.678 55.000 28.70 20.79 38.96 3.73
290 291 1.516386 CTTGACCGGTCGGATCGTG 60.516 63.158 28.70 9.94 38.96 4.35
291 292 1.929806 CTTGACCGGTCGGATCGTGA 61.930 60.000 28.70 6.50 38.96 4.35
292 293 1.525718 TTGACCGGTCGGATCGTGAA 61.526 55.000 28.70 12.54 38.96 3.18
293 294 1.226603 GACCGGTCGGATCGTGAAG 60.227 63.158 20.85 0.00 38.96 3.02
294 295 1.651240 GACCGGTCGGATCGTGAAGA 61.651 60.000 20.85 0.00 38.96 2.87
295 296 1.226603 CCGGTCGGATCGTGAAGAC 60.227 63.158 10.10 0.00 37.50 3.01
296 297 2.914797 CCGGTCGGATCGTGAAGACG 62.915 65.000 10.10 0.00 41.70 4.18
297 298 1.505353 GGTCGGATCGTGAAGACGT 59.495 57.895 0.00 0.00 46.20 4.34
298 299 0.729116 GGTCGGATCGTGAAGACGTA 59.271 55.000 0.00 0.00 46.20 3.57
299 300 1.530646 GGTCGGATCGTGAAGACGTAC 60.531 57.143 0.00 0.00 46.20 3.67
300 301 0.371301 TCGGATCGTGAAGACGTACG 59.629 55.000 15.01 15.01 46.20 3.67
306 307 2.403259 TCGTGAAGACGTACGACTACA 58.597 47.619 24.41 13.28 46.20 2.74
307 308 2.995939 TCGTGAAGACGTACGACTACAT 59.004 45.455 24.41 6.17 46.20 2.29
308 309 3.061295 TCGTGAAGACGTACGACTACATC 59.939 47.826 24.41 15.62 46.20 3.06
309 310 3.181527 CGTGAAGACGTACGACTACATCA 60.182 47.826 24.41 18.00 42.54 3.07
310 311 4.667415 CGTGAAGACGTACGACTACATCAA 60.667 45.833 24.41 4.49 42.54 2.57
311 312 4.552660 GTGAAGACGTACGACTACATCAAC 59.447 45.833 24.41 11.90 0.00 3.18
312 313 3.754188 AGACGTACGACTACATCAACC 57.246 47.619 24.41 0.00 0.00 3.77
313 314 2.094894 AGACGTACGACTACATCAACCG 59.905 50.000 24.41 0.00 0.00 4.44
314 315 1.186030 CGTACGACTACATCAACCGC 58.814 55.000 10.44 0.00 0.00 5.68
315 316 1.186030 GTACGACTACATCAACCGCG 58.814 55.000 0.00 0.00 0.00 6.46
316 317 0.804364 TACGACTACATCAACCGCGT 59.196 50.000 4.92 0.00 0.00 6.01
317 318 0.038892 ACGACTACATCAACCGCGTT 60.039 50.000 4.92 0.00 0.00 4.84
318 319 0.365523 CGACTACATCAACCGCGTTG 59.634 55.000 4.92 10.14 43.99 4.10
319 320 1.425412 GACTACATCAACCGCGTTGT 58.575 50.000 16.97 9.99 43.23 3.32
320 321 1.126113 GACTACATCAACCGCGTTGTG 59.874 52.381 16.97 15.92 43.23 3.33
321 322 0.179225 CTACATCAACCGCGTTGTGC 60.179 55.000 16.97 0.00 43.23 4.57
322 323 0.601576 TACATCAACCGCGTTGTGCT 60.602 50.000 16.97 6.88 43.23 4.40
323 324 0.601576 ACATCAACCGCGTTGTGCTA 60.602 50.000 16.97 3.28 43.23 3.49
324 325 0.515127 CATCAACCGCGTTGTGCTAA 59.485 50.000 16.97 2.99 43.23 3.09
325 326 0.515564 ATCAACCGCGTTGTGCTAAC 59.484 50.000 16.97 0.00 43.23 2.34
326 327 1.438059 CAACCGCGTTGTGCTAACG 60.438 57.895 18.25 18.25 45.56 3.18
332 333 1.129809 CGTTGTGCTAACGCTTCCG 59.870 57.895 12.46 0.00 36.82 4.30
333 334 1.154469 GTTGTGCTAACGCTTCCGC 60.154 57.895 0.00 0.00 38.22 5.54
334 335 1.301401 TTGTGCTAACGCTTCCGCT 60.301 52.632 0.00 0.00 38.22 5.52
335 336 0.882927 TTGTGCTAACGCTTCCGCTT 60.883 50.000 0.00 0.00 38.22 4.68
336 337 0.882927 TGTGCTAACGCTTCCGCTTT 60.883 50.000 0.00 0.00 38.22 3.51
337 338 0.179222 GTGCTAACGCTTCCGCTTTC 60.179 55.000 0.00 0.00 38.22 2.62
338 339 1.058903 GCTAACGCTTCCGCTTTCG 59.941 57.895 0.00 0.00 38.22 3.46
349 350 3.274393 CGCTTTCGGTCTATGAGGG 57.726 57.895 0.00 0.00 0.00 4.30
350 351 0.460311 CGCTTTCGGTCTATGAGGGT 59.540 55.000 0.00 0.00 0.00 4.34
351 352 1.679680 CGCTTTCGGTCTATGAGGGTA 59.320 52.381 0.00 0.00 0.00 3.69
352 353 2.543238 CGCTTTCGGTCTATGAGGGTAC 60.543 54.545 0.00 0.00 0.00 3.34
353 354 2.543238 GCTTTCGGTCTATGAGGGTACG 60.543 54.545 0.00 0.00 0.00 3.67
354 355 2.425143 TTCGGTCTATGAGGGTACGT 57.575 50.000 0.00 0.00 0.00 3.57
355 356 1.671979 TCGGTCTATGAGGGTACGTG 58.328 55.000 0.00 0.00 0.00 4.49
356 357 0.666913 CGGTCTATGAGGGTACGTGG 59.333 60.000 0.00 0.00 0.00 4.94
357 358 1.748244 CGGTCTATGAGGGTACGTGGA 60.748 57.143 0.00 0.00 0.00 4.02
358 359 1.680207 GGTCTATGAGGGTACGTGGAC 59.320 57.143 0.00 0.00 36.83 4.02
359 360 2.372264 GTCTATGAGGGTACGTGGACA 58.628 52.381 0.00 0.00 37.28 4.02
360 361 2.756760 GTCTATGAGGGTACGTGGACAA 59.243 50.000 0.00 0.00 37.28 3.18
361 362 2.756760 TCTATGAGGGTACGTGGACAAC 59.243 50.000 0.00 0.00 0.00 3.32
362 363 1.344065 ATGAGGGTACGTGGACAACA 58.656 50.000 0.00 0.00 0.00 3.33
363 364 0.390124 TGAGGGTACGTGGACAACAC 59.610 55.000 0.00 0.00 46.78 3.32
371 372 2.453242 GTGGACAACACTCTCCCCT 58.547 57.895 0.00 0.00 46.72 4.79
372 373 0.321996 GTGGACAACACTCTCCCCTC 59.678 60.000 0.00 0.00 46.72 4.30
373 374 0.191064 TGGACAACACTCTCCCCTCT 59.809 55.000 0.00 0.00 0.00 3.69
374 375 0.899019 GGACAACACTCTCCCCTCTC 59.101 60.000 0.00 0.00 0.00 3.20
375 376 0.528470 GACAACACTCTCCCCTCTCG 59.472 60.000 0.00 0.00 0.00 4.04
376 377 0.178958 ACAACACTCTCCCCTCTCGT 60.179 55.000 0.00 0.00 0.00 4.18
377 378 0.969894 CAACACTCTCCCCTCTCGTT 59.030 55.000 0.00 0.00 0.00 3.85
378 379 0.969894 AACACTCTCCCCTCTCGTTG 59.030 55.000 0.00 0.00 0.00 4.10
379 380 1.216710 CACTCTCCCCTCTCGTTGC 59.783 63.158 0.00 0.00 0.00 4.17
380 381 1.077625 ACTCTCCCCTCTCGTTGCT 59.922 57.895 0.00 0.00 0.00 3.91
381 382 0.331954 ACTCTCCCCTCTCGTTGCTA 59.668 55.000 0.00 0.00 0.00 3.49
382 383 1.063567 ACTCTCCCCTCTCGTTGCTAT 60.064 52.381 0.00 0.00 0.00 2.97
383 384 1.339610 CTCTCCCCTCTCGTTGCTATG 59.660 57.143 0.00 0.00 0.00 2.23
384 385 0.249657 CTCCCCTCTCGTTGCTATGC 60.250 60.000 0.00 0.00 0.00 3.14
385 386 0.975556 TCCCCTCTCGTTGCTATGCA 60.976 55.000 0.00 0.00 36.47 3.96
386 387 0.107456 CCCCTCTCGTTGCTATGCAT 59.893 55.000 3.79 3.79 38.76 3.96
387 388 1.506493 CCCTCTCGTTGCTATGCATC 58.494 55.000 0.19 0.00 38.76 3.91
388 389 1.202568 CCCTCTCGTTGCTATGCATCA 60.203 52.381 0.19 0.00 38.76 3.07
389 390 2.549563 CCCTCTCGTTGCTATGCATCAT 60.550 50.000 0.19 0.00 38.76 2.45
390 391 2.735663 CCTCTCGTTGCTATGCATCATC 59.264 50.000 0.19 0.00 38.76 2.92
391 392 3.387397 CTCTCGTTGCTATGCATCATCA 58.613 45.455 0.19 0.00 38.76 3.07
392 393 3.995048 CTCTCGTTGCTATGCATCATCAT 59.005 43.478 0.19 0.00 38.76 2.45
393 394 3.744426 TCTCGTTGCTATGCATCATCATG 59.256 43.478 0.19 0.00 38.76 3.07
394 395 3.731089 TCGTTGCTATGCATCATCATGA 58.269 40.909 0.19 0.00 38.76 3.07
395 396 4.320870 TCGTTGCTATGCATCATCATGAT 58.679 39.130 0.19 1.18 38.76 2.45
396 397 4.390909 TCGTTGCTATGCATCATCATGATC 59.609 41.667 4.86 0.00 38.76 2.92
397 398 4.436986 CGTTGCTATGCATCATCATGATCC 60.437 45.833 4.86 0.00 38.76 3.36
398 399 4.569719 TGCTATGCATCATCATGATCCT 57.430 40.909 4.86 0.00 34.28 3.24
399 400 4.261801 TGCTATGCATCATCATGATCCTG 58.738 43.478 4.86 7.40 34.28 3.86
400 401 4.262617 GCTATGCATCATCATGATCCTGT 58.737 43.478 4.86 0.00 34.28 4.00
401 402 4.095036 GCTATGCATCATCATGATCCTGTG 59.905 45.833 4.86 3.75 34.28 3.66
402 403 3.570912 TGCATCATCATGATCCTGTGT 57.429 42.857 4.86 0.00 34.28 3.72
403 404 3.211045 TGCATCATCATGATCCTGTGTG 58.789 45.455 4.86 2.51 34.28 3.82
404 405 3.211865 GCATCATCATGATCCTGTGTGT 58.788 45.455 4.86 0.00 34.28 3.72
405 406 3.003378 GCATCATCATGATCCTGTGTGTG 59.997 47.826 4.86 1.85 34.28 3.82
406 407 2.635714 TCATCATGATCCTGTGTGTGC 58.364 47.619 4.86 0.00 0.00 4.57
407 408 1.329599 CATCATGATCCTGTGTGTGCG 59.670 52.381 4.86 0.00 0.00 5.34
408 409 0.321346 TCATGATCCTGTGTGTGCGT 59.679 50.000 0.00 0.00 0.00 5.24
409 410 1.548269 TCATGATCCTGTGTGTGCGTA 59.452 47.619 0.00 0.00 0.00 4.42
410 411 1.929169 CATGATCCTGTGTGTGCGTAG 59.071 52.381 0.00 0.00 0.00 3.51
411 412 1.253100 TGATCCTGTGTGTGCGTAGA 58.747 50.000 0.00 0.00 0.00 2.59
412 413 1.616374 TGATCCTGTGTGTGCGTAGAA 59.384 47.619 0.00 0.00 0.00 2.10
413 414 2.233676 TGATCCTGTGTGTGCGTAGAAT 59.766 45.455 0.00 0.00 0.00 2.40
414 415 2.831685 TCCTGTGTGTGCGTAGAATT 57.168 45.000 0.00 0.00 0.00 2.17
415 416 3.120321 TCCTGTGTGTGCGTAGAATTT 57.880 42.857 0.00 0.00 0.00 1.82
416 417 3.472652 TCCTGTGTGTGCGTAGAATTTT 58.527 40.909 0.00 0.00 0.00 1.82
417 418 3.880490 TCCTGTGTGTGCGTAGAATTTTT 59.120 39.130 0.00 0.00 0.00 1.94
437 438 4.920640 TTTTGAAATTAGTGCGTTCCCA 57.079 36.364 0.00 0.00 0.00 4.37
438 439 4.920640 TTTGAAATTAGTGCGTTCCCAA 57.079 36.364 0.00 0.00 0.00 4.12
439 440 3.907894 TGAAATTAGTGCGTTCCCAAC 57.092 42.857 0.00 0.00 0.00 3.77
440 441 3.215151 TGAAATTAGTGCGTTCCCAACA 58.785 40.909 0.00 0.00 0.00 3.33
441 442 3.252215 TGAAATTAGTGCGTTCCCAACAG 59.748 43.478 0.00 0.00 0.00 3.16
442 443 1.821216 ATTAGTGCGTTCCCAACAGG 58.179 50.000 0.00 0.00 0.00 4.00
443 444 0.250553 TTAGTGCGTTCCCAACAGGG 60.251 55.000 0.00 0.00 44.52 4.45
444 445 1.412453 TAGTGCGTTCCCAACAGGGT 61.412 55.000 0.00 0.00 43.53 4.34
445 446 2.203280 TGCGTTCCCAACAGGGTG 60.203 61.111 0.00 0.00 43.53 4.61
446 447 3.670377 GCGTTCCCAACAGGGTGC 61.670 66.667 0.00 0.44 43.53 5.01
447 448 2.983592 CGTTCCCAACAGGGTGCC 60.984 66.667 0.00 0.00 43.53 5.01
448 449 2.983592 GTTCCCAACAGGGTGCCG 60.984 66.667 0.00 0.00 43.53 5.69
449 450 4.966787 TTCCCAACAGGGTGCCGC 62.967 66.667 0.00 0.00 43.53 6.53
451 452 4.974721 CCCAACAGGGTGCCGCTT 62.975 66.667 0.00 0.00 37.83 4.68
452 453 3.673484 CCAACAGGGTGCCGCTTG 61.673 66.667 0.00 0.00 0.00 4.01
453 454 3.673484 CAACAGGGTGCCGCTTGG 61.673 66.667 0.00 0.00 0.00 3.61
454 455 4.974721 AACAGGGTGCCGCTTGGG 62.975 66.667 0.00 0.00 39.58 4.12
465 466 2.672996 GCTTGGGCCTCGCTTGAA 60.673 61.111 4.53 0.00 0.00 2.69
466 467 2.694760 GCTTGGGCCTCGCTTGAAG 61.695 63.158 4.53 0.00 0.00 3.02
467 468 2.034066 TTGGGCCTCGCTTGAAGG 59.966 61.111 4.53 0.00 0.00 3.46
468 469 2.754664 CTTGGGCCTCGCTTGAAGGT 62.755 60.000 4.53 0.00 0.00 3.50
469 470 2.034221 GGGCCTCGCTTGAAGGTT 59.966 61.111 0.84 0.00 0.00 3.50
470 471 2.041115 GGGCCTCGCTTGAAGGTTC 61.041 63.158 0.84 0.00 0.00 3.62
471 472 2.391389 GGCCTCGCTTGAAGGTTCG 61.391 63.158 0.00 0.00 0.00 3.95
472 473 3.028366 GCCTCGCTTGAAGGTTCGC 62.028 63.158 0.00 0.00 0.00 4.70
473 474 2.730672 CCTCGCTTGAAGGTTCGCG 61.731 63.158 0.00 0.00 46.28 5.87
474 475 2.022129 CTCGCTTGAAGGTTCGCGT 61.022 57.895 5.77 0.00 45.25 6.01
475 476 2.170985 CGCTTGAAGGTTCGCGTG 59.829 61.111 5.77 0.00 40.64 5.34
476 477 2.307309 CGCTTGAAGGTTCGCGTGA 61.307 57.895 5.77 0.00 40.64 4.35
477 478 1.827315 CGCTTGAAGGTTCGCGTGAA 61.827 55.000 7.45 7.45 40.64 3.18
478 479 0.306533 GCTTGAAGGTTCGCGTGAAA 59.693 50.000 13.92 0.00 35.46 2.69
479 480 1.069227 GCTTGAAGGTTCGCGTGAAAT 60.069 47.619 13.92 2.18 35.46 2.17
480 481 2.839474 CTTGAAGGTTCGCGTGAAATC 58.161 47.619 13.92 12.37 35.46 2.17
481 482 1.153353 TGAAGGTTCGCGTGAAATCC 58.847 50.000 13.92 11.50 35.46 3.01
482 483 1.270625 TGAAGGTTCGCGTGAAATCCT 60.271 47.619 13.92 13.70 35.46 3.24
483 484 1.393883 GAAGGTTCGCGTGAAATCCTC 59.606 52.381 18.14 10.17 35.46 3.71
484 485 0.391263 AGGTTCGCGTGAAATCCTCC 60.391 55.000 13.92 9.99 35.46 4.30
485 486 0.672401 GGTTCGCGTGAAATCCTCCA 60.672 55.000 13.92 0.00 35.46 3.86
486 487 0.442699 GTTCGCGTGAAATCCTCCAC 59.557 55.000 13.92 0.00 35.46 4.02
487 488 0.672401 TTCGCGTGAAATCCTCCACC 60.672 55.000 9.37 0.00 0.00 4.61
488 489 2.452813 CGCGTGAAATCCTCCACCG 61.453 63.158 0.00 0.00 0.00 4.94
489 490 2.750888 GCGTGAAATCCTCCACCGC 61.751 63.158 0.00 0.00 0.00 5.68
490 491 1.079127 CGTGAAATCCTCCACCGCT 60.079 57.895 0.00 0.00 0.00 5.52
491 492 1.361668 CGTGAAATCCTCCACCGCTG 61.362 60.000 0.00 0.00 0.00 5.18
492 493 0.321653 GTGAAATCCTCCACCGCTGT 60.322 55.000 0.00 0.00 0.00 4.40
493 494 0.400213 TGAAATCCTCCACCGCTGTT 59.600 50.000 0.00 0.00 0.00 3.16
494 495 1.202879 TGAAATCCTCCACCGCTGTTT 60.203 47.619 0.00 0.00 0.00 2.83
495 496 1.886542 GAAATCCTCCACCGCTGTTTT 59.113 47.619 0.00 0.00 0.00 2.43
496 497 1.995376 AATCCTCCACCGCTGTTTTT 58.005 45.000 0.00 0.00 0.00 1.94
497 498 2.871096 ATCCTCCACCGCTGTTTTTA 57.129 45.000 0.00 0.00 0.00 1.52
498 499 1.886886 TCCTCCACCGCTGTTTTTAC 58.113 50.000 0.00 0.00 0.00 2.01
499 500 0.879090 CCTCCACCGCTGTTTTTACC 59.121 55.000 0.00 0.00 0.00 2.85
500 501 1.544759 CCTCCACCGCTGTTTTTACCT 60.545 52.381 0.00 0.00 0.00 3.08
501 502 2.289819 CCTCCACCGCTGTTTTTACCTA 60.290 50.000 0.00 0.00 0.00 3.08
502 503 3.606687 CTCCACCGCTGTTTTTACCTAT 58.393 45.455 0.00 0.00 0.00 2.57
503 504 4.383335 CCTCCACCGCTGTTTTTACCTATA 60.383 45.833 0.00 0.00 0.00 1.31
504 505 5.362105 TCCACCGCTGTTTTTACCTATAT 57.638 39.130 0.00 0.00 0.00 0.86
505 506 6.463331 CCTCCACCGCTGTTTTTACCTATATA 60.463 42.308 0.00 0.00 0.00 0.86
506 507 6.887013 TCCACCGCTGTTTTTACCTATATAA 58.113 36.000 0.00 0.00 0.00 0.98
507 508 7.337167 TCCACCGCTGTTTTTACCTATATAAA 58.663 34.615 0.00 0.00 0.00 1.40
508 509 7.828223 TCCACCGCTGTTTTTACCTATATAAAA 59.172 33.333 0.00 0.00 33.28 1.52
509 510 8.126700 CCACCGCTGTTTTTACCTATATAAAAG 58.873 37.037 0.00 0.00 35.88 2.27
510 511 8.126700 CACCGCTGTTTTTACCTATATAAAAGG 58.873 37.037 3.50 3.50 35.88 3.11
511 512 7.136772 CCGCTGTTTTTACCTATATAAAAGGC 58.863 38.462 4.74 0.00 37.67 4.35
512 513 7.136772 CGCTGTTTTTACCTATATAAAAGGCC 58.863 38.462 0.00 0.00 37.67 5.19
513 514 7.431249 GCTGTTTTTACCTATATAAAAGGCCC 58.569 38.462 0.00 0.00 37.67 5.80
514 515 7.571080 TGTTTTTACCTATATAAAAGGCCCG 57.429 36.000 0.00 0.00 37.67 6.13
515 516 6.039605 TGTTTTTACCTATATAAAAGGCCCGC 59.960 38.462 0.00 0.00 37.67 6.13
516 517 2.873094 ACCTATATAAAAGGCCCGCC 57.127 50.000 0.00 0.00 37.67 6.13
517 518 1.353358 ACCTATATAAAAGGCCCGCCC 59.647 52.381 0.00 0.00 37.67 6.13
519 520 2.355818 CCTATATAAAAGGCCCGCCCTC 60.356 54.545 0.00 0.00 45.62 4.30
520 521 0.404426 ATATAAAAGGCCCGCCCTCC 59.596 55.000 0.00 0.00 45.62 4.30
521 522 0.696485 TATAAAAGGCCCGCCCTCCT 60.696 55.000 0.00 0.00 45.62 3.69
522 523 1.996070 ATAAAAGGCCCGCCCTCCTC 61.996 60.000 0.00 0.00 45.62 3.71
529 530 4.787280 CCGCCCTCCTCCCAGTCT 62.787 72.222 0.00 0.00 0.00 3.24
530 531 3.465403 CGCCCTCCTCCCAGTCTG 61.465 72.222 0.00 0.00 0.00 3.51
531 532 3.086600 GCCCTCCTCCCAGTCTGG 61.087 72.222 12.40 12.40 37.25 3.86
540 541 3.655481 CCAGTCTGGGTCGCAAAC 58.345 61.111 11.46 0.00 32.67 2.93
541 542 1.227823 CCAGTCTGGGTCGCAAACA 60.228 57.895 11.46 0.00 32.67 2.83
542 543 0.606401 CCAGTCTGGGTCGCAAACAT 60.606 55.000 11.46 0.00 32.67 2.71
543 544 1.338674 CCAGTCTGGGTCGCAAACATA 60.339 52.381 11.46 0.00 32.67 2.29
544 545 2.002586 CAGTCTGGGTCGCAAACATAG 58.997 52.381 0.00 0.00 0.00 2.23
545 546 1.623811 AGTCTGGGTCGCAAACATAGT 59.376 47.619 0.00 0.00 0.00 2.12
546 547 2.829720 AGTCTGGGTCGCAAACATAGTA 59.170 45.455 0.00 0.00 0.00 1.82
547 548 3.451178 AGTCTGGGTCGCAAACATAGTAT 59.549 43.478 0.00 0.00 0.00 2.12
548 549 4.647853 AGTCTGGGTCGCAAACATAGTATA 59.352 41.667 0.00 0.00 0.00 1.47
549 550 4.982916 GTCTGGGTCGCAAACATAGTATAG 59.017 45.833 0.00 0.00 0.00 1.31
550 551 4.038763 TCTGGGTCGCAAACATAGTATAGG 59.961 45.833 0.00 0.00 0.00 2.57
551 552 3.064931 GGGTCGCAAACATAGTATAGGC 58.935 50.000 0.00 0.00 0.00 3.93
552 553 3.064931 GGTCGCAAACATAGTATAGGCC 58.935 50.000 0.00 0.00 0.00 5.19
553 554 3.244112 GGTCGCAAACATAGTATAGGCCT 60.244 47.826 11.78 11.78 0.00 5.19
554 555 4.377897 GTCGCAAACATAGTATAGGCCTT 58.622 43.478 12.58 0.81 0.00 4.35
555 556 4.211374 GTCGCAAACATAGTATAGGCCTTG 59.789 45.833 12.58 3.96 0.00 3.61
556 557 3.498397 CGCAAACATAGTATAGGCCTTGG 59.502 47.826 12.58 0.00 0.00 3.61
557 558 3.821033 GCAAACATAGTATAGGCCTTGGG 59.179 47.826 12.58 0.00 0.00 4.12
558 559 4.445735 GCAAACATAGTATAGGCCTTGGGA 60.446 45.833 12.58 0.00 0.00 4.37
559 560 4.976540 AACATAGTATAGGCCTTGGGAC 57.023 45.455 12.58 4.05 0.00 4.46
560 561 2.897969 ACATAGTATAGGCCTTGGGACG 59.102 50.000 12.58 0.00 34.63 4.79
561 562 2.005370 TAGTATAGGCCTTGGGACGG 57.995 55.000 12.58 0.00 34.63 4.79
562 563 0.031414 AGTATAGGCCTTGGGACGGT 60.031 55.000 12.58 0.00 34.63 4.83
563 564 0.106149 GTATAGGCCTTGGGACGGTG 59.894 60.000 12.58 0.00 34.63 4.94
564 565 0.031917 TATAGGCCTTGGGACGGTGA 60.032 55.000 12.58 0.00 34.63 4.02
565 566 1.623542 ATAGGCCTTGGGACGGTGAC 61.624 60.000 12.58 0.00 34.63 3.67
566 567 2.741878 TAGGCCTTGGGACGGTGACT 62.742 60.000 12.58 0.00 34.63 3.41
567 568 2.358737 GCCTTGGGACGGTGACTG 60.359 66.667 0.00 0.00 0.00 3.51
568 569 2.358737 CCTTGGGACGGTGACTGC 60.359 66.667 0.00 0.00 0.00 4.40
569 570 2.738521 CTTGGGACGGTGACTGCG 60.739 66.667 0.00 0.00 0.00 5.18
570 571 4.308458 TTGGGACGGTGACTGCGG 62.308 66.667 0.00 0.00 0.00 5.69
572 573 4.436998 GGGACGGTGACTGCGGAG 62.437 72.222 0.85 0.85 0.00 4.63
573 574 3.371063 GGACGGTGACTGCGGAGA 61.371 66.667 12.26 0.00 0.00 3.71
574 575 2.126424 GACGGTGACTGCGGAGAC 60.126 66.667 12.26 4.89 0.00 3.36
575 576 3.628280 GACGGTGACTGCGGAGACC 62.628 68.421 12.26 7.94 0.00 3.85
614 615 4.758251 CCTCGGCATGGTGTCGCA 62.758 66.667 0.00 0.00 46.34 5.10
615 616 3.190849 CTCGGCATGGTGTCGCAG 61.191 66.667 0.00 0.00 46.34 5.18
618 619 4.107051 GGCATGGTGTCGCAGCAC 62.107 66.667 12.63 5.21 44.62 4.40
619 620 3.356267 GCATGGTGTCGCAGCACA 61.356 61.111 12.63 0.00 44.62 4.57
620 621 2.906939 GCATGGTGTCGCAGCACAA 61.907 57.895 12.63 0.00 44.62 3.33
621 622 1.208358 CATGGTGTCGCAGCACAAG 59.792 57.895 12.63 4.46 44.62 3.16
622 623 2.620112 ATGGTGTCGCAGCACAAGC 61.620 57.895 12.63 0.00 44.62 4.01
658 659 3.780173 GCCTTCGGCTCCTCAGCT 61.780 66.667 0.00 0.00 46.69 4.24
659 660 2.498726 CCTTCGGCTCCTCAGCTC 59.501 66.667 0.00 0.00 46.03 4.09
660 661 2.103934 CTTCGGCTCCTCAGCTCG 59.896 66.667 0.00 0.00 46.03 5.03
661 662 2.361230 TTCGGCTCCTCAGCTCGA 60.361 61.111 4.20 4.20 46.03 4.04
662 663 2.606155 CTTCGGCTCCTCAGCTCGAC 62.606 65.000 6.95 0.00 46.03 4.20
663 664 4.200283 CGGCTCCTCAGCTCGACC 62.200 72.222 0.00 0.00 46.03 4.79
664 665 2.757917 GGCTCCTCAGCTCGACCT 60.758 66.667 0.00 0.00 46.03 3.85
665 666 2.493973 GCTCCTCAGCTCGACCTG 59.506 66.667 1.01 1.01 43.09 4.00
666 667 3.074999 GCTCCTCAGCTCGACCTGG 62.075 68.421 7.86 0.00 43.09 4.45
667 668 3.071206 TCCTCAGCTCGACCTGGC 61.071 66.667 7.86 0.00 33.64 4.85
668 669 3.385384 CCTCAGCTCGACCTGGCA 61.385 66.667 7.86 0.00 33.64 4.92
669 670 2.183811 CTCAGCTCGACCTGGCAG 59.816 66.667 7.75 7.75 33.64 4.85
670 671 2.601666 TCAGCTCGACCTGGCAGT 60.602 61.111 14.43 1.17 33.64 4.40
671 672 2.164865 CTCAGCTCGACCTGGCAGTT 62.165 60.000 14.43 0.00 33.64 3.16
672 673 2.031516 CAGCTCGACCTGGCAGTTG 61.032 63.158 14.43 5.93 0.00 3.16
673 674 2.031163 GCTCGACCTGGCAGTTGT 59.969 61.111 14.43 4.79 0.00 3.32
674 675 1.185618 AGCTCGACCTGGCAGTTGTA 61.186 55.000 14.43 0.00 0.00 2.41
675 676 0.737715 GCTCGACCTGGCAGTTGTAG 60.738 60.000 14.43 5.76 0.00 2.74
676 677 0.737715 CTCGACCTGGCAGTTGTAGC 60.738 60.000 14.43 0.00 0.00 3.58
677 678 1.005037 CGACCTGGCAGTTGTAGCA 60.005 57.895 14.43 0.00 0.00 3.49
678 679 0.391661 CGACCTGGCAGTTGTAGCAT 60.392 55.000 14.43 0.00 0.00 3.79
679 680 1.089920 GACCTGGCAGTTGTAGCATG 58.910 55.000 14.43 0.00 0.00 4.06
680 681 0.401738 ACCTGGCAGTTGTAGCATGT 59.598 50.000 14.43 0.00 0.00 3.21
681 682 1.202927 ACCTGGCAGTTGTAGCATGTT 60.203 47.619 14.43 0.00 0.00 2.71
682 683 1.888512 CCTGGCAGTTGTAGCATGTTT 59.111 47.619 14.43 0.00 0.00 2.83
683 684 2.095059 CCTGGCAGTTGTAGCATGTTTC 60.095 50.000 14.43 0.00 0.00 2.78
684 685 2.816087 CTGGCAGTTGTAGCATGTTTCT 59.184 45.455 6.28 0.00 0.00 2.52
685 686 2.813754 TGGCAGTTGTAGCATGTTTCTC 59.186 45.455 0.00 0.00 0.00 2.87
686 687 2.159653 GGCAGTTGTAGCATGTTTCTCG 60.160 50.000 0.00 0.00 0.00 4.04
687 688 2.726066 GCAGTTGTAGCATGTTTCTCGC 60.726 50.000 0.00 0.00 0.00 5.03
688 689 1.726791 AGTTGTAGCATGTTTCTCGCG 59.273 47.619 0.00 0.00 0.00 5.87
689 690 1.075542 TTGTAGCATGTTTCTCGCGG 58.924 50.000 6.13 0.00 0.00 6.46
690 691 1.348594 GTAGCATGTTTCTCGCGGC 59.651 57.895 6.13 0.00 0.00 6.53
691 692 1.079474 TAGCATGTTTCTCGCGGCA 60.079 52.632 6.13 0.00 0.00 5.69
692 693 0.672091 TAGCATGTTTCTCGCGGCAA 60.672 50.000 6.13 0.00 0.00 4.52
748 749 2.040606 AGCACCACCGGGACCTAT 59.959 61.111 6.32 0.00 38.05 2.57
809 810 3.113514 TTCCAGTTCGGGTGCAGCA 62.114 57.895 19.06 0.00 34.36 4.41
817 818 1.597854 CGGGTGCAGCAAGTCTGAA 60.598 57.895 19.06 0.00 45.72 3.02
889 896 4.724602 GCTCAGTCGCTCGCCACA 62.725 66.667 0.00 0.00 0.00 4.17
960 971 3.338126 CTCGTCCGGGTTCCTCACG 62.338 68.421 0.00 1.70 43.35 4.35
977 988 2.980233 GCTCGGTGCAGCAACCTT 60.980 61.111 17.33 0.00 42.31 3.50
1028 1042 2.357517 CAAGCAGCTCCCGACGTT 60.358 61.111 0.00 0.00 0.00 3.99
1032 1046 1.038130 AGCAGCTCCCGACGTTCTAT 61.038 55.000 0.00 0.00 0.00 1.98
1033 1047 0.179108 GCAGCTCCCGACGTTCTATT 60.179 55.000 0.00 0.00 0.00 1.73
1040 1054 1.342555 CCGACGTTCTATTTCGTGCA 58.657 50.000 0.00 0.00 40.39 4.57
1041 1055 1.320555 CCGACGTTCTATTTCGTGCAG 59.679 52.381 0.00 0.00 40.39 4.41
1089 1103 0.912486 AGCTCAACATACCCACCTCC 59.088 55.000 0.00 0.00 0.00 4.30
1282 1296 0.455464 CGTCAACATACCGAGCGTCA 60.455 55.000 0.00 0.00 0.00 4.35
1322 1336 2.579201 CGTCATCGACCTGGCCTT 59.421 61.111 3.32 0.00 39.71 4.35
1324 1338 0.174845 CGTCATCGACCTGGCCTTTA 59.825 55.000 3.32 0.00 39.71 1.85
1343 1357 4.561500 TTAACGGGATCATTCTGGACAA 57.438 40.909 0.00 0.00 0.00 3.18
1388 1402 2.914777 GATGACAGCTCCCTCGGCAC 62.915 65.000 0.00 0.00 0.00 5.01
1392 1406 3.011517 AGCTCCCTCGGCACCATT 61.012 61.111 0.00 0.00 0.00 3.16
1465 1479 3.565214 TCGGGTTCAAGGCAGGCA 61.565 61.111 0.00 0.00 0.00 4.75
1469 1483 0.323360 GGGTTCAAGGCAGGCACATA 60.323 55.000 0.00 0.00 0.00 2.29
1470 1484 1.686115 GGGTTCAAGGCAGGCACATAT 60.686 52.381 0.00 0.00 0.00 1.78
1471 1485 1.406539 GGTTCAAGGCAGGCACATATG 59.593 52.381 0.00 0.00 0.00 1.78
1518 1623 7.916914 AAAAGAAGGTATTAGCATAACACGT 57.083 32.000 0.00 0.00 0.00 4.49
1519 1624 9.439500 AAAAAGAAGGTATTAGCATAACACGTA 57.561 29.630 0.00 0.00 0.00 3.57
1520 1625 7.998753 AAGAAGGTATTAGCATAACACGTAC 57.001 36.000 0.00 0.00 0.00 3.67
1521 1626 7.344095 AGAAGGTATTAGCATAACACGTACT 57.656 36.000 0.00 0.00 0.00 2.73
1522 1627 8.455903 AGAAGGTATTAGCATAACACGTACTA 57.544 34.615 0.00 0.00 0.00 1.82
1523 1628 9.075678 AGAAGGTATTAGCATAACACGTACTAT 57.924 33.333 0.00 0.00 0.00 2.12
1590 1760 8.195436 AGAATAAATGAAGCCATGTTCAATCAG 58.805 33.333 3.16 0.00 39.84 2.90
1592 1762 2.516906 TGAAGCCATGTTCAATCAGCA 58.483 42.857 0.00 0.00 33.41 4.41
1658 2143 2.433436 AGGCAATGTTACTCGTTTCCC 58.567 47.619 0.00 0.00 30.47 3.97
1659 2144 1.471287 GGCAATGTTACTCGTTTCCCC 59.529 52.381 0.00 0.00 0.00 4.81
1661 2146 2.554893 GCAATGTTACTCGTTTCCCCAA 59.445 45.455 0.00 0.00 0.00 4.12
1662 2147 3.004944 GCAATGTTACTCGTTTCCCCAAA 59.995 43.478 0.00 0.00 0.00 3.28
1663 2148 4.500035 GCAATGTTACTCGTTTCCCCAAAA 60.500 41.667 0.00 0.00 0.00 2.44
1664 2149 4.841443 ATGTTACTCGTTTCCCCAAAAC 57.159 40.909 0.00 0.00 43.22 2.43
1665 2150 3.888583 TGTTACTCGTTTCCCCAAAACT 58.111 40.909 0.00 0.00 44.25 2.66
1670 2155 4.721132 ACTCGTTTCCCCAAAACTGAATA 58.279 39.130 0.00 0.00 44.25 1.75
1672 2157 4.721132 TCGTTTCCCCAAAACTGAATAGT 58.279 39.130 0.00 0.00 44.25 2.12
1674 2159 6.297582 TCGTTTCCCCAAAACTGAATAGTAA 58.702 36.000 0.00 0.00 44.25 2.24
1676 2161 6.859508 CGTTTCCCCAAAACTGAATAGTAAAC 59.140 38.462 0.00 0.00 44.25 2.01
1679 2164 5.935789 TCCCCAAAACTGAATAGTAAACTCG 59.064 40.000 0.00 0.00 35.69 4.18
1871 2357 0.031449 GCGGCCACTTTAAGTTTGCA 59.969 50.000 15.32 0.00 0.00 4.08
1874 2360 2.794350 CGGCCACTTTAAGTTTGCAAAG 59.206 45.455 13.26 1.61 37.69 2.77
1875 2361 3.490078 CGGCCACTTTAAGTTTGCAAAGA 60.490 43.478 13.26 0.00 35.70 2.52
1876 2362 3.802139 GGCCACTTTAAGTTTGCAAAGAC 59.198 43.478 13.26 2.08 35.70 3.01
1890 2376 6.767524 TTGCAAAGACGGTGGATATATTTT 57.232 33.333 0.00 0.00 0.00 1.82
1891 2377 6.767524 TGCAAAGACGGTGGATATATTTTT 57.232 33.333 0.00 0.00 0.00 1.94
1928 2414 0.176680 ACGAGCTCGCCATGATTTCT 59.823 50.000 34.83 9.46 44.43 2.52
1936 2422 2.953648 TCGCCATGATTTCTGCATTGAT 59.046 40.909 0.00 0.00 0.00 2.57
1997 2484 3.441222 TCGCATGCTTCTGATCAACATTT 59.559 39.130 17.13 0.00 0.00 2.32
2006 2493 6.460676 GCTTCTGATCAACATTTTCCTATGGG 60.461 42.308 0.00 0.00 0.00 4.00
2019 2506 1.000955 CCTATGGGTGATGTACGAGGC 59.999 57.143 0.00 0.00 0.00 4.70
2020 2507 1.000955 CTATGGGTGATGTACGAGGCC 59.999 57.143 0.00 0.00 0.00 5.19
2021 2508 2.028125 ATGGGTGATGTACGAGGCCG 62.028 60.000 0.00 0.00 42.50 6.13
2022 2509 2.420568 GGGTGATGTACGAGGCCGA 61.421 63.158 0.00 0.00 39.50 5.54
2023 2510 1.065928 GGTGATGTACGAGGCCGAG 59.934 63.158 0.00 0.00 39.50 4.63
2024 2511 1.664321 GGTGATGTACGAGGCCGAGT 61.664 60.000 10.83 10.83 39.50 4.18
2025 2512 0.248539 GTGATGTACGAGGCCGAGTC 60.249 60.000 9.41 0.00 39.50 3.36
2026 2513 1.009900 GATGTACGAGGCCGAGTCG 60.010 63.158 11.05 11.05 43.25 4.18
2048 2535 0.246086 CCATCCCAGATAGAGCGCTC 59.754 60.000 30.01 30.01 0.00 5.03
2063 2550 2.345244 CTCGGTGAGCCAAGCACT 59.655 61.111 0.00 0.00 36.53 4.40
2077 2564 1.301716 GCACTGGCCTCTCGTTCAA 60.302 57.895 3.32 0.00 0.00 2.69
2084 2571 1.374947 CCTCTCGTTCAAGCCCCAA 59.625 57.895 0.00 0.00 0.00 4.12
2100 2587 1.378882 CCAACGGCTGATGTGATGGG 61.379 60.000 0.00 0.00 0.00 4.00
2101 2588 1.077501 AACGGCTGATGTGATGGGG 60.078 57.895 0.00 0.00 0.00 4.96
2107 2594 2.256072 CTGATGTGATGGGGCGGTGA 62.256 60.000 0.00 0.00 0.00 4.02
2159 2646 5.183904 ACGACGATAATGAGATGATGGATGA 59.816 40.000 0.00 0.00 0.00 2.92
2211 2702 1.277739 GGCGATGATGACACATGCG 59.722 57.895 0.00 0.00 0.00 4.73
2240 2731 3.027170 CTGCGCGGTTGTAGCCTTG 62.027 63.158 8.83 0.00 0.00 3.61
2250 2741 3.684788 GGTTGTAGCCTTGACACACATAG 59.315 47.826 0.00 0.00 0.00 2.23
2264 2755 2.097629 ACACATAGTCGTCATCGTCCAG 59.902 50.000 0.00 0.00 38.33 3.86
2279 2770 2.821366 CAGTGGCATGGTCGAGGC 60.821 66.667 0.00 0.00 0.00 4.70
2298 2789 2.281091 CCTGGGCAGGCCATGAAT 59.719 61.111 17.76 0.00 42.44 2.57
2436 2927 7.255942 GCCATGGCAAATTAGTAATTAGACCAT 60.256 37.037 32.08 20.70 37.92 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.626825 GCCCCCGTATATAAAGGAGCA 59.373 52.381 7.00 0.00 0.00 4.26
1 2 1.626825 TGCCCCCGTATATAAAGGAGC 59.373 52.381 7.00 9.17 0.00 4.70
3 4 2.262637 CCTGCCCCCGTATATAAAGGA 58.737 52.381 7.00 0.00 0.00 3.36
4 5 1.280998 CCCTGCCCCCGTATATAAAGG 59.719 57.143 0.00 0.00 0.00 3.11
5 6 1.280998 CCCCTGCCCCCGTATATAAAG 59.719 57.143 0.00 0.00 0.00 1.85
6 7 1.364269 CCCCTGCCCCCGTATATAAA 58.636 55.000 0.00 0.00 0.00 1.40
8 9 1.081462 CCCCCTGCCCCCGTATATA 59.919 63.158 0.00 0.00 0.00 0.86
9 10 2.204090 CCCCCTGCCCCCGTATAT 60.204 66.667 0.00 0.00 0.00 0.86
24 25 1.198759 TTGTGTCTCTAGGGTGCCCC 61.199 60.000 3.17 2.16 45.90 5.80
25 26 0.036294 GTTGTGTCTCTAGGGTGCCC 60.036 60.000 0.00 0.00 0.00 5.36
26 27 0.685097 TGTTGTGTCTCTAGGGTGCC 59.315 55.000 0.00 0.00 0.00 5.01
27 28 2.543777 TTGTTGTGTCTCTAGGGTGC 57.456 50.000 0.00 0.00 0.00 5.01
28 29 4.641396 TCAATTGTTGTGTCTCTAGGGTG 58.359 43.478 5.13 0.00 0.00 4.61
29 30 4.974645 TCAATTGTTGTGTCTCTAGGGT 57.025 40.909 5.13 0.00 0.00 4.34
30 31 4.568359 CGATCAATTGTTGTGTCTCTAGGG 59.432 45.833 5.13 0.00 0.00 3.53
31 32 5.171476 ACGATCAATTGTTGTGTCTCTAGG 58.829 41.667 5.13 0.00 0.00 3.02
32 33 6.712241 AACGATCAATTGTTGTGTCTCTAG 57.288 37.500 5.13 0.00 33.27 2.43
33 34 6.704050 TCAAACGATCAATTGTTGTGTCTCTA 59.296 34.615 5.13 0.00 34.71 2.43
34 35 5.527214 TCAAACGATCAATTGTTGTGTCTCT 59.473 36.000 5.13 0.00 34.71 3.10
35 36 5.747565 TCAAACGATCAATTGTTGTGTCTC 58.252 37.500 5.13 0.00 34.71 3.36
36 37 5.749596 TCAAACGATCAATTGTTGTGTCT 57.250 34.783 5.13 0.00 34.71 3.41
37 38 6.373779 AGATCAAACGATCAATTGTTGTGTC 58.626 36.000 5.13 5.80 41.60 3.67
38 39 6.317789 AGATCAAACGATCAATTGTTGTGT 57.682 33.333 5.13 0.00 41.60 3.72
39 40 7.627585 AAAGATCAAACGATCAATTGTTGTG 57.372 32.000 5.13 0.00 41.60 3.33
40 41 9.398170 CTAAAAGATCAAACGATCAATTGTTGT 57.602 29.630 5.13 0.55 41.60 3.32
41 42 8.368126 GCTAAAAGATCAAACGATCAATTGTTG 58.632 33.333 5.13 2.45 41.60 3.33
42 43 7.542130 GGCTAAAAGATCAAACGATCAATTGTT 59.458 33.333 5.13 0.00 41.60 2.83
43 44 7.029563 GGCTAAAAGATCAAACGATCAATTGT 58.970 34.615 5.13 0.00 41.60 2.71
44 45 6.195244 CGGCTAAAAGATCAAACGATCAATTG 59.805 38.462 0.00 0.00 41.60 2.32
45 46 6.128007 ACGGCTAAAAGATCAAACGATCAATT 60.128 34.615 5.33 2.62 41.60 2.32
46 47 5.354234 ACGGCTAAAAGATCAAACGATCAAT 59.646 36.000 5.33 0.00 41.60 2.57
47 48 4.693566 ACGGCTAAAAGATCAAACGATCAA 59.306 37.500 5.33 0.00 41.60 2.57
48 49 4.092821 CACGGCTAAAAGATCAAACGATCA 59.907 41.667 5.33 0.00 41.60 2.92
49 50 4.092968 ACACGGCTAAAAGATCAAACGATC 59.907 41.667 0.00 0.00 39.78 3.69
50 51 4.000988 ACACGGCTAAAAGATCAAACGAT 58.999 39.130 0.00 0.00 0.00 3.73
51 52 3.185594 CACACGGCTAAAAGATCAAACGA 59.814 43.478 0.00 0.00 0.00 3.85
52 53 3.479006 CACACGGCTAAAAGATCAAACG 58.521 45.455 0.00 0.00 0.00 3.60
53 54 3.234386 GCACACGGCTAAAAGATCAAAC 58.766 45.455 0.00 0.00 40.25 2.93
54 55 2.095969 CGCACACGGCTAAAAGATCAAA 60.096 45.455 0.00 0.00 41.67 2.69
55 56 1.463056 CGCACACGGCTAAAAGATCAA 59.537 47.619 0.00 0.00 41.67 2.57
56 57 1.075542 CGCACACGGCTAAAAGATCA 58.924 50.000 0.00 0.00 41.67 2.92
57 58 3.877801 CGCACACGGCTAAAAGATC 57.122 52.632 0.00 0.00 41.67 2.75
76 77 0.983378 ACTATGGTGGAGGAGGGCAC 60.983 60.000 0.00 0.00 0.00 5.01
77 78 0.691078 GACTATGGTGGAGGAGGGCA 60.691 60.000 0.00 0.00 0.00 5.36
78 79 1.411651 GGACTATGGTGGAGGAGGGC 61.412 65.000 0.00 0.00 0.00 5.19
79 80 0.031111 TGGACTATGGTGGAGGAGGG 60.031 60.000 0.00 0.00 0.00 4.30
80 81 1.123928 GTGGACTATGGTGGAGGAGG 58.876 60.000 0.00 0.00 0.00 4.30
81 82 1.123928 GGTGGACTATGGTGGAGGAG 58.876 60.000 0.00 0.00 0.00 3.69
82 83 0.716591 AGGTGGACTATGGTGGAGGA 59.283 55.000 0.00 0.00 0.00 3.71
83 84 1.123928 GAGGTGGACTATGGTGGAGG 58.876 60.000 0.00 0.00 0.00 4.30
84 85 0.747255 CGAGGTGGACTATGGTGGAG 59.253 60.000 0.00 0.00 0.00 3.86
85 86 0.333652 TCGAGGTGGACTATGGTGGA 59.666 55.000 0.00 0.00 0.00 4.02
86 87 1.414158 ATCGAGGTGGACTATGGTGG 58.586 55.000 0.00 0.00 0.00 4.61
87 88 4.873746 ATTATCGAGGTGGACTATGGTG 57.126 45.455 0.00 0.00 0.00 4.17
88 89 5.477291 CAGTATTATCGAGGTGGACTATGGT 59.523 44.000 0.00 0.00 0.00 3.55
89 90 5.477291 ACAGTATTATCGAGGTGGACTATGG 59.523 44.000 0.00 0.00 0.00 2.74
90 91 6.576662 ACAGTATTATCGAGGTGGACTATG 57.423 41.667 0.00 0.00 0.00 2.23
91 92 6.374894 GCTACAGTATTATCGAGGTGGACTAT 59.625 42.308 0.00 0.00 0.00 2.12
92 93 5.704515 GCTACAGTATTATCGAGGTGGACTA 59.295 44.000 0.00 0.00 0.00 2.59
93 94 4.519730 GCTACAGTATTATCGAGGTGGACT 59.480 45.833 0.00 0.00 0.00 3.85
94 95 4.613167 CGCTACAGTATTATCGAGGTGGAC 60.613 50.000 0.00 0.00 0.00 4.02
95 96 3.501062 CGCTACAGTATTATCGAGGTGGA 59.499 47.826 0.00 0.00 0.00 4.02
96 97 3.366070 CCGCTACAGTATTATCGAGGTGG 60.366 52.174 0.00 0.00 0.00 4.61
97 98 3.252701 ACCGCTACAGTATTATCGAGGTG 59.747 47.826 0.00 0.00 0.00 4.00
98 99 3.252701 CACCGCTACAGTATTATCGAGGT 59.747 47.826 0.00 0.00 0.00 3.85
99 100 3.822996 CACCGCTACAGTATTATCGAGG 58.177 50.000 0.00 0.00 0.00 4.63
100 101 3.058155 AGCACCGCTACAGTATTATCGAG 60.058 47.826 0.00 0.00 36.99 4.04
101 102 2.882761 AGCACCGCTACAGTATTATCGA 59.117 45.455 0.00 0.00 36.99 3.59
102 103 3.284323 AGCACCGCTACAGTATTATCG 57.716 47.619 0.00 0.00 36.99 2.92
103 104 5.162075 CCTAAGCACCGCTACAGTATTATC 58.838 45.833 0.00 0.00 38.25 1.75
104 105 4.560919 GCCTAAGCACCGCTACAGTATTAT 60.561 45.833 0.00 0.00 38.25 1.28
105 106 3.243636 GCCTAAGCACCGCTACAGTATTA 60.244 47.826 0.00 0.00 38.25 0.98
106 107 2.483188 GCCTAAGCACCGCTACAGTATT 60.483 50.000 0.00 0.00 38.25 1.89
107 108 1.068741 GCCTAAGCACCGCTACAGTAT 59.931 52.381 0.00 0.00 38.25 2.12
108 109 0.458669 GCCTAAGCACCGCTACAGTA 59.541 55.000 0.00 0.00 38.25 2.74
109 110 1.218316 GCCTAAGCACCGCTACAGT 59.782 57.895 0.00 0.00 38.25 3.55
110 111 1.878522 CGCCTAAGCACCGCTACAG 60.879 63.158 0.00 0.00 38.25 2.74
111 112 1.879737 TTCGCCTAAGCACCGCTACA 61.880 55.000 0.00 0.00 38.25 2.74
112 113 1.146358 CTTCGCCTAAGCACCGCTAC 61.146 60.000 0.00 0.00 38.25 3.58
113 114 1.141019 CTTCGCCTAAGCACCGCTA 59.859 57.895 0.00 0.00 38.25 4.26
114 115 2.125512 CTTCGCCTAAGCACCGCT 60.126 61.111 0.00 0.00 42.56 5.52
127 128 4.124351 TACCGACGCAGGGCTTCG 62.124 66.667 9.73 9.73 47.00 3.79
128 129 2.202756 CTACCGACGCAGGGCTTC 60.203 66.667 1.73 0.00 35.02 3.86
129 130 2.280552 TTCTACCGACGCAGGGCTT 61.281 57.895 1.73 0.00 35.02 4.35
130 131 2.678934 TTCTACCGACGCAGGGCT 60.679 61.111 1.73 0.00 35.02 5.19
131 132 2.508663 GTTCTACCGACGCAGGGC 60.509 66.667 1.73 0.00 35.02 5.19
132 133 0.527817 GATGTTCTACCGACGCAGGG 60.528 60.000 1.73 0.00 35.02 4.45
133 134 0.172578 TGATGTTCTACCGACGCAGG 59.827 55.000 0.00 0.00 37.30 4.85
134 135 2.120232 GATGATGTTCTACCGACGCAG 58.880 52.381 0.00 0.00 0.00 5.18
135 136 1.474879 TGATGATGTTCTACCGACGCA 59.525 47.619 0.00 0.00 0.00 5.24
136 137 2.203800 TGATGATGTTCTACCGACGC 57.796 50.000 0.00 0.00 0.00 5.19
137 138 2.973879 CGATGATGATGTTCTACCGACG 59.026 50.000 0.00 0.00 0.00 5.12
138 139 3.966154 ACGATGATGATGTTCTACCGAC 58.034 45.455 0.00 0.00 0.00 4.79
139 140 3.630312 TGACGATGATGATGTTCTACCGA 59.370 43.478 0.00 0.00 0.00 4.69
140 141 3.731216 GTGACGATGATGATGTTCTACCG 59.269 47.826 0.00 0.00 0.00 4.02
141 142 4.051922 GGTGACGATGATGATGTTCTACC 58.948 47.826 0.00 0.00 0.00 3.18
142 143 4.504461 GTGGTGACGATGATGATGTTCTAC 59.496 45.833 0.00 0.00 0.00 2.59
143 144 4.682787 GTGGTGACGATGATGATGTTCTA 58.317 43.478 0.00 0.00 0.00 2.10
144 145 3.525537 GTGGTGACGATGATGATGTTCT 58.474 45.455 0.00 0.00 0.00 3.01
145 146 3.933155 GTGGTGACGATGATGATGTTC 57.067 47.619 0.00 0.00 0.00 3.18
172 173 3.921677 TGAGGGATAGTTTCGTCAACAC 58.078 45.455 3.61 0.00 37.93 3.32
173 174 4.610605 TTGAGGGATAGTTTCGTCAACA 57.389 40.909 3.61 0.00 37.93 3.33
174 175 4.923264 GTTGAGGGATAGTTTCGTCAAC 57.077 45.455 11.31 11.31 45.14 3.18
175 176 4.039973 AGTGTTGAGGGATAGTTTCGTCAA 59.960 41.667 0.00 0.00 36.04 3.18
176 177 3.576982 AGTGTTGAGGGATAGTTTCGTCA 59.423 43.478 0.00 0.00 0.00 4.35
177 178 4.174762 GAGTGTTGAGGGATAGTTTCGTC 58.825 47.826 0.00 0.00 0.00 4.20
178 179 3.367087 CGAGTGTTGAGGGATAGTTTCGT 60.367 47.826 0.00 0.00 0.00 3.85
179 180 3.179830 CGAGTGTTGAGGGATAGTTTCG 58.820 50.000 0.00 0.00 0.00 3.46
180 181 3.522553 CCGAGTGTTGAGGGATAGTTTC 58.477 50.000 0.00 0.00 0.00 2.78
181 182 2.354805 GCCGAGTGTTGAGGGATAGTTT 60.355 50.000 0.00 0.00 0.00 2.66
182 183 1.207329 GCCGAGTGTTGAGGGATAGTT 59.793 52.381 0.00 0.00 0.00 2.24
183 184 0.824759 GCCGAGTGTTGAGGGATAGT 59.175 55.000 0.00 0.00 0.00 2.12
184 185 1.115467 AGCCGAGTGTTGAGGGATAG 58.885 55.000 0.00 0.00 0.00 2.08
185 186 0.824109 CAGCCGAGTGTTGAGGGATA 59.176 55.000 0.00 0.00 0.00 2.59
186 187 1.599047 CAGCCGAGTGTTGAGGGAT 59.401 57.895 0.00 0.00 0.00 3.85
187 188 2.583441 CCAGCCGAGTGTTGAGGGA 61.583 63.158 0.00 0.00 0.00 4.20
188 189 1.903877 ATCCAGCCGAGTGTTGAGGG 61.904 60.000 0.00 0.00 0.00 4.30
189 190 0.460987 GATCCAGCCGAGTGTTGAGG 60.461 60.000 0.00 0.00 0.00 3.86
190 191 0.803768 CGATCCAGCCGAGTGTTGAG 60.804 60.000 0.00 0.00 0.00 3.02
191 192 1.215382 CGATCCAGCCGAGTGTTGA 59.785 57.895 0.00 0.00 0.00 3.18
192 193 1.811266 CCGATCCAGCCGAGTGTTG 60.811 63.158 0.00 0.00 0.00 3.33
193 194 1.949847 CTCCGATCCAGCCGAGTGTT 61.950 60.000 0.00 0.00 0.00 3.32
194 195 2.362503 TCCGATCCAGCCGAGTGT 60.363 61.111 0.00 0.00 0.00 3.55
195 196 1.949847 AACTCCGATCCAGCCGAGTG 61.950 60.000 0.00 0.00 0.00 3.51
196 197 1.668101 GAACTCCGATCCAGCCGAGT 61.668 60.000 0.00 0.00 0.00 4.18
197 198 1.066587 GAACTCCGATCCAGCCGAG 59.933 63.158 0.00 0.00 0.00 4.63
198 199 2.771639 CGAACTCCGATCCAGCCGA 61.772 63.158 0.00 0.00 41.76 5.54
199 200 2.278857 CGAACTCCGATCCAGCCG 60.279 66.667 0.00 0.00 41.76 5.52
200 201 3.207354 TCGAACTCCGATCCAGCC 58.793 61.111 0.00 0.00 43.23 4.85
207 208 2.033141 ACGTCCCTCGAACTCCGA 59.967 61.111 1.88 0.00 46.35 4.55
208 209 1.654954 ATGACGTCCCTCGAACTCCG 61.655 60.000 14.12 0.00 42.86 4.63
209 210 0.100861 GATGACGTCCCTCGAACTCC 59.899 60.000 14.12 0.00 42.86 3.85
210 211 0.248134 CGATGACGTCCCTCGAACTC 60.248 60.000 24.99 5.48 42.86 3.01
211 212 0.675837 TCGATGACGTCCCTCGAACT 60.676 55.000 27.70 0.60 42.86 3.01
212 213 0.248134 CTCGATGACGTCCCTCGAAC 60.248 60.000 28.71 6.04 40.52 3.95
213 214 1.989966 GCTCGATGACGTCCCTCGAA 61.990 60.000 28.71 18.23 40.52 3.71
214 215 2.470362 GCTCGATGACGTCCCTCGA 61.470 63.158 27.81 27.81 42.86 4.04
215 216 2.024871 GCTCGATGACGTCCCTCG 59.975 66.667 23.88 23.88 46.00 4.63
216 217 1.064946 CAGCTCGATGACGTCCCTC 59.935 63.158 14.12 9.05 40.69 4.30
217 218 0.965866 TTCAGCTCGATGACGTCCCT 60.966 55.000 14.12 0.00 40.69 4.20
218 219 0.802607 GTTCAGCTCGATGACGTCCC 60.803 60.000 14.12 3.95 40.69 4.46
219 220 1.134530 CGTTCAGCTCGATGACGTCC 61.135 60.000 14.12 0.00 40.69 4.79
220 221 0.454620 ACGTTCAGCTCGATGACGTC 60.455 55.000 9.11 9.11 40.69 4.34
221 222 0.729478 CACGTTCAGCTCGATGACGT 60.729 55.000 0.00 5.49 37.39 4.34
222 223 0.729478 ACACGTTCAGCTCGATGACG 60.729 55.000 0.00 4.93 41.26 4.35
223 224 0.710567 CACACGTTCAGCTCGATGAC 59.289 55.000 0.00 0.00 0.00 3.06
224 225 1.008875 GCACACGTTCAGCTCGATGA 61.009 55.000 0.00 0.00 0.00 2.92
225 226 1.010935 AGCACACGTTCAGCTCGATG 61.011 55.000 0.00 0.07 32.05 3.84
226 227 1.010935 CAGCACACGTTCAGCTCGAT 61.011 55.000 3.38 0.00 36.26 3.59
227 228 1.661509 CAGCACACGTTCAGCTCGA 60.662 57.895 3.38 0.00 36.26 4.04
228 229 1.215014 TTCAGCACACGTTCAGCTCG 61.215 55.000 3.38 0.00 36.26 5.03
229 230 0.233332 GTTCAGCACACGTTCAGCTC 59.767 55.000 3.38 0.00 36.26 4.09
230 231 0.179073 AGTTCAGCACACGTTCAGCT 60.179 50.000 0.64 0.64 39.63 4.24
231 232 0.233332 GAGTTCAGCACACGTTCAGC 59.767 55.000 0.00 0.00 0.00 4.26
232 233 0.504384 CGAGTTCAGCACACGTTCAG 59.496 55.000 0.00 0.00 35.01 3.02
233 234 0.874175 CCGAGTTCAGCACACGTTCA 60.874 55.000 0.00 0.00 37.75 3.18
234 235 0.596600 TCCGAGTTCAGCACACGTTC 60.597 55.000 0.00 0.00 37.75 3.95
235 236 0.597637 CTCCGAGTTCAGCACACGTT 60.598 55.000 0.00 0.00 37.75 3.99
236 237 1.007271 CTCCGAGTTCAGCACACGT 60.007 57.895 0.00 0.00 37.75 4.49
237 238 1.734477 CCTCCGAGTTCAGCACACG 60.734 63.158 0.00 0.00 39.03 4.49
238 239 0.946221 CACCTCCGAGTTCAGCACAC 60.946 60.000 0.00 0.00 0.00 3.82
239 240 1.367471 CACCTCCGAGTTCAGCACA 59.633 57.895 0.00 0.00 0.00 4.57
240 241 2.029844 GCACCTCCGAGTTCAGCAC 61.030 63.158 0.00 0.00 0.00 4.40
241 242 2.343758 GCACCTCCGAGTTCAGCA 59.656 61.111 0.00 0.00 0.00 4.41
242 243 2.435059 GGCACCTCCGAGTTCAGC 60.435 66.667 0.00 0.00 0.00 4.26
259 260 1.611592 GGTCAAGTACCGAACGCACG 61.612 60.000 0.00 0.00 38.88 5.34
260 261 2.147820 GGTCAAGTACCGAACGCAC 58.852 57.895 0.00 0.00 38.88 5.34
261 262 4.659480 GGTCAAGTACCGAACGCA 57.341 55.556 0.00 0.00 38.88 5.24
268 269 0.101939 GATCCGACCGGTCAAGTACC 59.898 60.000 32.80 13.24 45.77 3.34
269 270 0.248377 CGATCCGACCGGTCAAGTAC 60.248 60.000 32.80 18.01 36.47 2.73
270 271 0.677731 ACGATCCGACCGGTCAAGTA 60.678 55.000 32.80 15.57 36.47 2.24
271 272 1.975407 ACGATCCGACCGGTCAAGT 60.975 57.895 32.80 20.49 36.47 3.16
272 273 1.516386 CACGATCCGACCGGTCAAG 60.516 63.158 32.80 23.24 36.47 3.02
273 274 1.525718 TTCACGATCCGACCGGTCAA 61.526 55.000 32.80 21.01 36.47 3.18
274 275 1.929806 CTTCACGATCCGACCGGTCA 61.930 60.000 32.80 16.29 36.47 4.02
275 276 1.226603 CTTCACGATCCGACCGGTC 60.227 63.158 25.28 25.28 36.47 4.79
276 277 1.676635 TCTTCACGATCCGACCGGT 60.677 57.895 6.92 6.92 36.47 5.28
277 278 1.226603 GTCTTCACGATCCGACCGG 60.227 63.158 0.00 0.00 0.00 5.28
278 279 4.379221 GTCTTCACGATCCGACCG 57.621 61.111 0.00 0.00 0.00 4.79
288 289 4.332186 TGATGTAGTCGTACGTCTTCAC 57.668 45.455 19.61 13.19 43.23 3.18
289 290 4.378770 GGTTGATGTAGTCGTACGTCTTCA 60.379 45.833 19.61 19.79 43.23 3.02
290 291 4.094212 GGTTGATGTAGTCGTACGTCTTC 58.906 47.826 19.61 15.02 43.23 2.87
291 292 3.425359 CGGTTGATGTAGTCGTACGTCTT 60.425 47.826 19.61 2.66 43.23 3.01
292 293 2.094894 CGGTTGATGTAGTCGTACGTCT 59.905 50.000 18.54 18.54 43.23 4.18
293 294 2.434761 CGGTTGATGTAGTCGTACGTC 58.565 52.381 16.05 10.06 43.16 4.34
294 295 1.466360 GCGGTTGATGTAGTCGTACGT 60.466 52.381 16.05 0.00 30.95 3.57
295 296 1.186030 GCGGTTGATGTAGTCGTACG 58.814 55.000 9.53 9.53 30.95 3.67
296 297 1.186030 CGCGGTTGATGTAGTCGTAC 58.814 55.000 0.00 0.00 0.00 3.67
297 298 0.804364 ACGCGGTTGATGTAGTCGTA 59.196 50.000 12.47 0.00 0.00 3.43
298 299 0.038892 AACGCGGTTGATGTAGTCGT 60.039 50.000 12.47 0.00 0.00 4.34
299 300 0.365523 CAACGCGGTTGATGTAGTCG 59.634 55.000 12.47 0.00 45.28 4.18
300 301 1.126113 CACAACGCGGTTGATGTAGTC 59.874 52.381 22.26 0.00 45.28 2.59
301 302 1.144969 CACAACGCGGTTGATGTAGT 58.855 50.000 22.26 2.04 45.28 2.73
302 303 0.179225 GCACAACGCGGTTGATGTAG 60.179 55.000 22.26 1.41 45.28 2.74
303 304 0.601576 AGCACAACGCGGTTGATGTA 60.602 50.000 22.26 0.00 45.28 2.29
304 305 0.601576 TAGCACAACGCGGTTGATGT 60.602 50.000 22.26 11.72 45.28 3.06
305 306 0.515127 TTAGCACAACGCGGTTGATG 59.485 50.000 22.26 17.39 45.28 3.07
306 307 0.515564 GTTAGCACAACGCGGTTGAT 59.484 50.000 22.26 13.46 45.28 2.57
307 308 1.823260 CGTTAGCACAACGCGGTTGA 61.823 55.000 22.26 3.38 45.28 3.18
331 332 0.460311 ACCCTCATAGACCGAAAGCG 59.540 55.000 0.00 0.00 37.24 4.68
332 333 2.543238 CGTACCCTCATAGACCGAAAGC 60.543 54.545 0.00 0.00 0.00 3.51
333 334 2.686915 ACGTACCCTCATAGACCGAAAG 59.313 50.000 0.00 0.00 0.00 2.62
334 335 2.424601 CACGTACCCTCATAGACCGAAA 59.575 50.000 0.00 0.00 0.00 3.46
335 336 2.019249 CACGTACCCTCATAGACCGAA 58.981 52.381 0.00 0.00 0.00 4.30
336 337 1.671979 CACGTACCCTCATAGACCGA 58.328 55.000 0.00 0.00 0.00 4.69
337 338 0.666913 CCACGTACCCTCATAGACCG 59.333 60.000 0.00 0.00 0.00 4.79
338 339 1.680207 GTCCACGTACCCTCATAGACC 59.320 57.143 0.00 0.00 0.00 3.85
339 340 2.372264 TGTCCACGTACCCTCATAGAC 58.628 52.381 0.00 0.00 0.00 2.59
340 341 2.756760 GTTGTCCACGTACCCTCATAGA 59.243 50.000 0.00 0.00 0.00 1.98
341 342 2.494471 TGTTGTCCACGTACCCTCATAG 59.506 50.000 0.00 0.00 0.00 2.23
342 343 2.231964 GTGTTGTCCACGTACCCTCATA 59.768 50.000 0.00 0.00 33.61 2.15
343 344 1.001633 GTGTTGTCCACGTACCCTCAT 59.998 52.381 0.00 0.00 33.61 2.90
344 345 0.390124 GTGTTGTCCACGTACCCTCA 59.610 55.000 0.00 0.00 33.61 3.86
345 346 3.206090 GTGTTGTCCACGTACCCTC 57.794 57.895 0.00 0.00 33.61 4.30
350 351 4.748514 AGGGGAGAGTGTTGTCCACGTA 62.749 54.545 0.00 0.00 44.77 3.57
352 353 1.472662 AGGGGAGAGTGTTGTCCACG 61.473 60.000 0.00 0.00 44.77 4.94
353 354 0.321996 GAGGGGAGAGTGTTGTCCAC 59.678 60.000 0.00 0.00 40.47 4.02
354 355 0.191064 AGAGGGGAGAGTGTTGTCCA 59.809 55.000 0.00 0.00 38.50 4.02
355 356 0.899019 GAGAGGGGAGAGTGTTGTCC 59.101 60.000 0.00 0.00 36.03 4.02
356 357 0.528470 CGAGAGGGGAGAGTGTTGTC 59.472 60.000 0.00 0.00 0.00 3.18
357 358 0.178958 ACGAGAGGGGAGAGTGTTGT 60.179 55.000 0.00 0.00 0.00 3.32
358 359 0.969894 AACGAGAGGGGAGAGTGTTG 59.030 55.000 0.00 0.00 0.00 3.33
359 360 0.969894 CAACGAGAGGGGAGAGTGTT 59.030 55.000 0.00 0.00 0.00 3.32
360 361 1.536943 GCAACGAGAGGGGAGAGTGT 61.537 60.000 0.00 0.00 0.00 3.55
361 362 1.216710 GCAACGAGAGGGGAGAGTG 59.783 63.158 0.00 0.00 0.00 3.51
362 363 0.331954 TAGCAACGAGAGGGGAGAGT 59.668 55.000 0.00 0.00 0.00 3.24
363 364 1.339610 CATAGCAACGAGAGGGGAGAG 59.660 57.143 0.00 0.00 0.00 3.20
364 365 1.403814 CATAGCAACGAGAGGGGAGA 58.596 55.000 0.00 0.00 0.00 3.71
365 366 0.249657 GCATAGCAACGAGAGGGGAG 60.250 60.000 0.00 0.00 0.00 4.30
366 367 0.975556 TGCATAGCAACGAGAGGGGA 60.976 55.000 0.00 0.00 34.76 4.81
367 368 0.107456 ATGCATAGCAACGAGAGGGG 59.893 55.000 0.00 0.00 43.62 4.79
368 369 1.202568 TGATGCATAGCAACGAGAGGG 60.203 52.381 0.00 0.00 43.62 4.30
369 370 2.229675 TGATGCATAGCAACGAGAGG 57.770 50.000 0.00 0.00 43.62 3.69
370 371 3.387397 TGATGATGCATAGCAACGAGAG 58.613 45.455 0.00 0.00 43.62 3.20
371 372 3.457610 TGATGATGCATAGCAACGAGA 57.542 42.857 0.00 0.00 43.62 4.04
372 373 3.744426 TCATGATGATGCATAGCAACGAG 59.256 43.478 0.00 0.00 43.62 4.18
373 374 3.731089 TCATGATGATGCATAGCAACGA 58.269 40.909 0.00 0.00 43.62 3.85
374 375 4.436986 GGATCATGATGATGCATAGCAACG 60.437 45.833 20.07 0.00 43.55 4.10
375 376 4.700692 AGGATCATGATGATGCATAGCAAC 59.299 41.667 25.35 3.50 46.03 4.17
376 377 4.700213 CAGGATCATGATGATGCATAGCAA 59.300 41.667 25.35 0.00 46.03 3.91
377 378 4.261801 CAGGATCATGATGATGCATAGCA 58.738 43.478 25.35 0.00 46.03 3.49
378 379 4.095036 CACAGGATCATGATGATGCATAGC 59.905 45.833 25.35 5.50 46.03 2.97
379 380 5.122396 CACACAGGATCATGATGATGCATAG 59.878 44.000 25.35 17.40 46.03 2.23
380 381 5.001232 CACACAGGATCATGATGATGCATA 58.999 41.667 25.35 0.00 46.03 3.14
381 382 3.821033 CACACAGGATCATGATGATGCAT 59.179 43.478 25.35 12.59 46.03 3.96
382 383 3.211045 CACACAGGATCATGATGATGCA 58.789 45.455 25.35 0.00 46.03 3.96
383 384 3.003378 CACACACAGGATCATGATGATGC 59.997 47.826 17.79 17.79 44.29 3.91
384 385 3.003378 GCACACACAGGATCATGATGATG 59.997 47.826 14.30 13.45 37.20 3.07
385 386 3.211865 GCACACACAGGATCATGATGAT 58.788 45.455 14.30 7.81 40.34 2.45
386 387 2.635714 GCACACACAGGATCATGATGA 58.364 47.619 14.30 0.00 0.00 2.92
387 388 1.329599 CGCACACACAGGATCATGATG 59.670 52.381 14.30 13.71 0.00 3.07
388 389 1.065926 ACGCACACACAGGATCATGAT 60.066 47.619 15.42 8.25 0.00 2.45
389 390 0.321346 ACGCACACACAGGATCATGA 59.679 50.000 15.42 0.00 0.00 3.07
390 391 1.929169 CTACGCACACACAGGATCATG 59.071 52.381 5.68 5.68 0.00 3.07
391 392 1.824852 TCTACGCACACACAGGATCAT 59.175 47.619 0.00 0.00 0.00 2.45
392 393 1.253100 TCTACGCACACACAGGATCA 58.747 50.000 0.00 0.00 0.00 2.92
393 394 2.363788 TTCTACGCACACACAGGATC 57.636 50.000 0.00 0.00 0.00 3.36
394 395 3.334583 AATTCTACGCACACACAGGAT 57.665 42.857 0.00 0.00 0.00 3.24
395 396 2.831685 AATTCTACGCACACACAGGA 57.168 45.000 0.00 0.00 0.00 3.86
396 397 3.896648 AAAATTCTACGCACACACAGG 57.103 42.857 0.00 0.00 0.00 4.00
415 416 5.263968 TGGGAACGCACTAATTTCAAAAA 57.736 34.783 0.00 0.00 0.00 1.94
416 417 4.920640 TGGGAACGCACTAATTTCAAAA 57.079 36.364 0.00 0.00 0.00 2.44
417 418 4.098044 TGTTGGGAACGCACTAATTTCAAA 59.902 37.500 0.00 0.00 0.00 2.69
418 419 3.632604 TGTTGGGAACGCACTAATTTCAA 59.367 39.130 0.00 0.00 0.00 2.69
419 420 3.215151 TGTTGGGAACGCACTAATTTCA 58.785 40.909 0.00 0.00 0.00 2.69
420 421 3.365969 CCTGTTGGGAACGCACTAATTTC 60.366 47.826 0.00 0.00 37.23 2.17
421 422 2.556622 CCTGTTGGGAACGCACTAATTT 59.443 45.455 0.00 0.00 37.23 1.82
422 423 2.159382 CCTGTTGGGAACGCACTAATT 58.841 47.619 0.00 0.00 37.23 1.40
423 424 1.821216 CCTGTTGGGAACGCACTAAT 58.179 50.000 0.00 0.00 37.23 1.73
424 425 3.315765 CCTGTTGGGAACGCACTAA 57.684 52.632 0.00 0.00 37.23 2.24
435 436 3.673484 CAAGCGGCACCCTGTTGG 61.673 66.667 1.45 0.00 41.37 3.77
436 437 3.673484 CCAAGCGGCACCCTGTTG 61.673 66.667 1.45 0.00 0.00 3.33
437 438 4.974721 CCCAAGCGGCACCCTGTT 62.975 66.667 1.45 0.00 0.00 3.16
448 449 2.672996 TTCAAGCGAGGCCCAAGC 60.673 61.111 0.00 2.10 38.76 4.01
449 450 2.042831 CCTTCAAGCGAGGCCCAAG 61.043 63.158 0.00 0.00 0.00 3.61
450 451 2.034066 CCTTCAAGCGAGGCCCAA 59.966 61.111 0.00 0.00 0.00 4.12
451 452 2.748058 GAACCTTCAAGCGAGGCCCA 62.748 60.000 0.00 0.00 37.84 5.36
452 453 2.034221 AACCTTCAAGCGAGGCCC 59.966 61.111 0.00 0.00 37.84 5.80
453 454 2.391389 CGAACCTTCAAGCGAGGCC 61.391 63.158 0.00 0.00 37.84 5.19
454 455 3.028366 GCGAACCTTCAAGCGAGGC 62.028 63.158 0.00 0.00 37.84 4.70
455 456 3.169198 GCGAACCTTCAAGCGAGG 58.831 61.111 0.00 0.00 40.24 4.63
459 460 0.306533 TTTCACGCGAACCTTCAAGC 59.693 50.000 15.93 0.00 0.00 4.01
460 461 2.412847 GGATTTCACGCGAACCTTCAAG 60.413 50.000 15.93 0.00 0.00 3.02
461 462 1.533731 GGATTTCACGCGAACCTTCAA 59.466 47.619 15.93 0.00 0.00 2.69
462 463 1.153353 GGATTTCACGCGAACCTTCA 58.847 50.000 15.93 0.00 0.00 3.02
463 464 1.393883 GAGGATTTCACGCGAACCTTC 59.606 52.381 15.93 3.68 29.89 3.46
464 465 1.439679 GAGGATTTCACGCGAACCTT 58.560 50.000 15.93 0.00 29.89 3.50
465 466 0.391263 GGAGGATTTCACGCGAACCT 60.391 55.000 15.93 11.46 31.86 3.50
466 467 0.672401 TGGAGGATTTCACGCGAACC 60.672 55.000 15.93 6.50 0.00 3.62
467 468 0.442699 GTGGAGGATTTCACGCGAAC 59.557 55.000 15.93 0.00 0.00 3.95
468 469 0.672401 GGTGGAGGATTTCACGCGAA 60.672 55.000 15.93 0.00 34.93 4.70
469 470 1.079405 GGTGGAGGATTTCACGCGA 60.079 57.895 15.93 0.00 34.93 5.87
470 471 2.452813 CGGTGGAGGATTTCACGCG 61.453 63.158 3.53 3.53 34.93 6.01
471 472 2.750888 GCGGTGGAGGATTTCACGC 61.751 63.158 0.00 0.00 37.64 5.34
472 473 1.079127 AGCGGTGGAGGATTTCACG 60.079 57.895 0.00 0.00 34.93 4.35
473 474 0.321653 ACAGCGGTGGAGGATTTCAC 60.322 55.000 20.20 0.00 0.00 3.18
474 475 0.400213 AACAGCGGTGGAGGATTTCA 59.600 50.000 20.20 0.00 0.00 2.69
475 476 1.534729 AAACAGCGGTGGAGGATTTC 58.465 50.000 20.20 0.00 0.00 2.17
476 477 1.995376 AAAACAGCGGTGGAGGATTT 58.005 45.000 20.20 6.93 0.00 2.17
477 478 1.995376 AAAAACAGCGGTGGAGGATT 58.005 45.000 20.20 0.04 0.00 3.01
478 479 2.433436 GTAAAAACAGCGGTGGAGGAT 58.567 47.619 20.20 3.62 0.00 3.24
479 480 1.543871 GGTAAAAACAGCGGTGGAGGA 60.544 52.381 20.20 0.00 0.00 3.71
480 481 0.879090 GGTAAAAACAGCGGTGGAGG 59.121 55.000 20.20 0.00 0.00 4.30
481 482 1.892209 AGGTAAAAACAGCGGTGGAG 58.108 50.000 20.20 0.00 0.00 3.86
482 483 3.706600 ATAGGTAAAAACAGCGGTGGA 57.293 42.857 20.20 0.00 0.00 4.02
483 484 7.556733 TTTATATAGGTAAAAACAGCGGTGG 57.443 36.000 20.20 0.80 0.00 4.61
484 485 8.126700 CCTTTTATATAGGTAAAAACAGCGGTG 58.873 37.037 14.13 14.13 34.26 4.94
485 486 7.201758 GCCTTTTATATAGGTAAAAACAGCGGT 60.202 37.037 0.00 0.00 34.26 5.68
486 487 7.136772 GCCTTTTATATAGGTAAAAACAGCGG 58.863 38.462 0.00 0.00 34.26 5.52
487 488 7.136772 GGCCTTTTATATAGGTAAAAACAGCG 58.863 38.462 0.00 0.00 34.26 5.18
488 489 7.431249 GGGCCTTTTATATAGGTAAAAACAGC 58.569 38.462 0.84 0.00 34.26 4.40
489 490 7.645402 CGGGCCTTTTATATAGGTAAAAACAG 58.355 38.462 0.84 0.00 34.26 3.16
490 491 6.039605 GCGGGCCTTTTATATAGGTAAAAACA 59.960 38.462 0.84 0.00 34.26 2.83
491 492 6.441274 GCGGGCCTTTTATATAGGTAAAAAC 58.559 40.000 0.84 0.00 34.26 2.43
492 493 5.535783 GGCGGGCCTTTTATATAGGTAAAAA 59.464 40.000 0.84 0.00 34.26 1.94
493 494 5.072055 GGCGGGCCTTTTATATAGGTAAAA 58.928 41.667 0.84 0.00 35.13 1.52
494 495 4.507157 GGGCGGGCCTTTTATATAGGTAAA 60.507 45.833 14.22 0.00 35.13 2.01
495 496 3.009363 GGGCGGGCCTTTTATATAGGTAA 59.991 47.826 14.22 0.00 35.13 2.85
496 497 2.573009 GGGCGGGCCTTTTATATAGGTA 59.427 50.000 14.22 0.00 35.13 3.08
497 498 1.353358 GGGCGGGCCTTTTATATAGGT 59.647 52.381 14.22 0.00 35.13 3.08
498 499 1.633945 AGGGCGGGCCTTTTATATAGG 59.366 52.381 18.71 0.00 36.10 2.57
499 500 2.355818 GGAGGGCGGGCCTTTTATATAG 60.356 54.545 25.20 0.00 36.10 1.31
500 501 1.631898 GGAGGGCGGGCCTTTTATATA 59.368 52.381 25.20 0.00 36.10 0.86
501 502 0.404426 GGAGGGCGGGCCTTTTATAT 59.596 55.000 25.20 0.00 36.10 0.86
502 503 0.696485 AGGAGGGCGGGCCTTTTATA 60.696 55.000 25.20 0.00 36.10 0.98
503 504 1.996070 GAGGAGGGCGGGCCTTTTAT 61.996 60.000 25.20 10.75 33.84 1.40
504 505 2.612746 AGGAGGGCGGGCCTTTTA 60.613 61.111 25.20 0.00 36.10 1.52
505 506 4.048470 GAGGAGGGCGGGCCTTTT 62.048 66.667 25.20 15.49 33.84 2.27
512 513 4.787280 AGACTGGGAGGAGGGCGG 62.787 72.222 0.00 0.00 0.00 6.13
513 514 3.465403 CAGACTGGGAGGAGGGCG 61.465 72.222 0.00 0.00 0.00 6.13
514 515 3.086600 CCAGACTGGGAGGAGGGC 61.087 72.222 14.26 0.00 32.67 5.19
523 524 0.606401 ATGTTTGCGACCCAGACTGG 60.606 55.000 15.15 15.15 37.25 4.00
524 525 2.002586 CTATGTTTGCGACCCAGACTG 58.997 52.381 0.00 0.00 30.30 3.51
525 526 1.623811 ACTATGTTTGCGACCCAGACT 59.376 47.619 0.00 0.00 30.30 3.24
526 527 2.094762 ACTATGTTTGCGACCCAGAC 57.905 50.000 0.00 0.00 0.00 3.51
527 528 4.038763 CCTATACTATGTTTGCGACCCAGA 59.961 45.833 0.00 0.00 0.00 3.86
528 529 4.307432 CCTATACTATGTTTGCGACCCAG 58.693 47.826 0.00 0.00 0.00 4.45
529 530 3.493699 GCCTATACTATGTTTGCGACCCA 60.494 47.826 0.00 0.00 0.00 4.51
530 531 3.064931 GCCTATACTATGTTTGCGACCC 58.935 50.000 0.00 0.00 0.00 4.46
531 532 3.064931 GGCCTATACTATGTTTGCGACC 58.935 50.000 0.00 0.00 0.00 4.79
532 533 3.991367 AGGCCTATACTATGTTTGCGAC 58.009 45.455 1.29 0.00 0.00 5.19
533 534 4.377021 CAAGGCCTATACTATGTTTGCGA 58.623 43.478 5.16 0.00 0.00 5.10
534 535 3.498397 CCAAGGCCTATACTATGTTTGCG 59.502 47.826 5.16 0.00 0.00 4.85
535 536 3.821033 CCCAAGGCCTATACTATGTTTGC 59.179 47.826 5.16 0.00 0.00 3.68
536 537 5.063880 GTCCCAAGGCCTATACTATGTTTG 58.936 45.833 5.16 0.00 0.00 2.93
537 538 4.202326 CGTCCCAAGGCCTATACTATGTTT 60.202 45.833 5.16 0.00 0.00 2.83
538 539 3.323979 CGTCCCAAGGCCTATACTATGTT 59.676 47.826 5.16 0.00 0.00 2.71
539 540 2.897969 CGTCCCAAGGCCTATACTATGT 59.102 50.000 5.16 0.00 0.00 2.29
540 541 2.233922 CCGTCCCAAGGCCTATACTATG 59.766 54.545 5.16 0.00 0.00 2.23
541 542 2.158204 ACCGTCCCAAGGCCTATACTAT 60.158 50.000 5.16 0.00 0.00 2.12
542 543 1.218704 ACCGTCCCAAGGCCTATACTA 59.781 52.381 5.16 0.00 0.00 1.82
543 544 0.031414 ACCGTCCCAAGGCCTATACT 60.031 55.000 5.16 0.00 0.00 2.12
544 545 0.106149 CACCGTCCCAAGGCCTATAC 59.894 60.000 5.16 0.63 0.00 1.47
545 546 0.031917 TCACCGTCCCAAGGCCTATA 60.032 55.000 5.16 0.00 0.00 1.31
546 547 1.306654 TCACCGTCCCAAGGCCTAT 60.307 57.895 5.16 0.00 0.00 2.57
547 548 2.120940 TCACCGTCCCAAGGCCTA 59.879 61.111 5.16 0.00 0.00 3.93
548 549 3.637273 GTCACCGTCCCAAGGCCT 61.637 66.667 0.00 0.00 0.00 5.19
549 550 3.637273 AGTCACCGTCCCAAGGCC 61.637 66.667 0.00 0.00 0.00 5.19
550 551 2.358737 CAGTCACCGTCCCAAGGC 60.359 66.667 0.00 0.00 0.00 4.35
551 552 2.358737 GCAGTCACCGTCCCAAGG 60.359 66.667 0.00 0.00 0.00 3.61
552 553 2.738521 CGCAGTCACCGTCCCAAG 60.739 66.667 0.00 0.00 0.00 3.61
553 554 4.308458 CCGCAGTCACCGTCCCAA 62.308 66.667 0.00 0.00 0.00 4.12
555 556 4.436998 CTCCGCAGTCACCGTCCC 62.437 72.222 0.00 0.00 0.00 4.46
556 557 3.371063 TCTCCGCAGTCACCGTCC 61.371 66.667 0.00 0.00 0.00 4.79
557 558 2.126424 GTCTCCGCAGTCACCGTC 60.126 66.667 0.00 0.00 0.00 4.79
558 559 3.681835 GGTCTCCGCAGTCACCGT 61.682 66.667 0.00 0.00 0.00 4.83
559 560 4.778415 CGGTCTCCGCAGTCACCG 62.778 72.222 0.00 0.00 45.38 4.94
560 561 4.436998 CCGGTCTCCGCAGTCACC 62.437 72.222 2.41 0.00 46.86 4.02
561 562 3.343788 CTCCGGTCTCCGCAGTCAC 62.344 68.421 0.00 0.00 46.86 3.67
562 563 3.062466 CTCCGGTCTCCGCAGTCA 61.062 66.667 0.00 0.00 46.86 3.41
563 564 3.827898 CCTCCGGTCTCCGCAGTC 61.828 72.222 0.00 0.00 46.86 3.51
569 570 3.866582 CCATGGCCTCCGGTCTCC 61.867 72.222 3.32 1.11 0.00 3.71
570 571 3.083997 ACCATGGCCTCCGGTCTC 61.084 66.667 13.04 0.00 0.00 3.36
571 572 3.402681 CACCATGGCCTCCGGTCT 61.403 66.667 13.04 0.00 0.00 3.85
572 573 4.489771 CCACCATGGCCTCCGGTC 62.490 72.222 13.04 0.00 0.00 4.79
597 598 4.758251 TGCGACACCATGCCGAGG 62.758 66.667 0.00 0.00 0.00 4.63
598 599 3.190849 CTGCGACACCATGCCGAG 61.191 66.667 0.00 0.00 0.00 4.63
601 602 4.107051 GTGCTGCGACACCATGCC 62.107 66.667 0.00 0.00 34.35 4.40
602 603 2.791396 CTTGTGCTGCGACACCATGC 62.791 60.000 6.47 0.00 39.93 4.06
603 604 1.208358 CTTGTGCTGCGACACCATG 59.792 57.895 6.47 0.00 39.93 3.66
604 605 2.620112 GCTTGTGCTGCGACACCAT 61.620 57.895 6.47 0.00 39.93 3.55
605 606 3.279116 GCTTGTGCTGCGACACCA 61.279 61.111 6.47 0.00 39.93 4.17
614 615 4.749310 CTCTCCGCCGCTTGTGCT 62.749 66.667 0.00 0.00 36.97 4.40
648 649 2.493973 CAGGTCGAGCTGAGGAGC 59.506 66.667 35.23 0.00 46.64 4.70
649 650 3.074999 GCCAGGTCGAGCTGAGGAG 62.075 68.421 38.78 25.25 0.00 3.69
650 651 3.071206 GCCAGGTCGAGCTGAGGA 61.071 66.667 38.78 0.00 0.00 3.71
651 652 3.368190 CTGCCAGGTCGAGCTGAGG 62.368 68.421 38.78 26.92 0.00 3.86
652 653 2.164865 AACTGCCAGGTCGAGCTGAG 62.165 60.000 38.78 30.81 0.00 3.35
653 654 2.210013 AACTGCCAGGTCGAGCTGA 61.210 57.895 38.78 22.79 0.00 4.26
654 655 2.031516 CAACTGCCAGGTCGAGCTG 61.032 63.158 32.53 32.53 0.00 4.24
655 656 1.185618 TACAACTGCCAGGTCGAGCT 61.186 55.000 12.24 12.24 0.00 4.09
656 657 0.737715 CTACAACTGCCAGGTCGAGC 60.738 60.000 6.48 6.48 0.00 5.03
657 658 0.737715 GCTACAACTGCCAGGTCGAG 60.738 60.000 0.00 0.00 0.00 4.04
658 659 1.292223 GCTACAACTGCCAGGTCGA 59.708 57.895 0.00 0.00 0.00 4.20
659 660 0.391661 ATGCTACAACTGCCAGGTCG 60.392 55.000 0.00 0.00 0.00 4.79
660 661 1.089920 CATGCTACAACTGCCAGGTC 58.910 55.000 0.00 0.00 0.00 3.85
661 662 0.401738 ACATGCTACAACTGCCAGGT 59.598 50.000 0.00 0.00 0.00 4.00
662 663 1.538047 AACATGCTACAACTGCCAGG 58.462 50.000 0.00 0.00 0.00 4.45
663 664 2.816087 AGAAACATGCTACAACTGCCAG 59.184 45.455 0.00 0.00 0.00 4.85
664 665 2.813754 GAGAAACATGCTACAACTGCCA 59.186 45.455 0.00 0.00 0.00 4.92
665 666 2.159653 CGAGAAACATGCTACAACTGCC 60.160 50.000 0.00 0.00 0.00 4.85
666 667 2.726066 GCGAGAAACATGCTACAACTGC 60.726 50.000 0.00 0.00 0.00 4.40
667 668 2.472886 CGCGAGAAACATGCTACAACTG 60.473 50.000 0.00 0.00 0.00 3.16
668 669 1.726791 CGCGAGAAACATGCTACAACT 59.273 47.619 0.00 0.00 0.00 3.16
669 670 1.201921 CCGCGAGAAACATGCTACAAC 60.202 52.381 8.23 0.00 0.00 3.32
670 671 1.075542 CCGCGAGAAACATGCTACAA 58.924 50.000 8.23 0.00 0.00 2.41
671 672 1.358725 GCCGCGAGAAACATGCTACA 61.359 55.000 8.23 0.00 0.00 2.74
672 673 1.348594 GCCGCGAGAAACATGCTAC 59.651 57.895 8.23 0.00 0.00 3.58
673 674 0.672091 TTGCCGCGAGAAACATGCTA 60.672 50.000 8.23 0.00 0.00 3.49
674 675 1.965930 TTGCCGCGAGAAACATGCT 60.966 52.632 8.23 0.00 0.00 3.79
675 676 1.797537 GTTGCCGCGAGAAACATGC 60.798 57.895 8.23 0.00 0.00 4.06
676 677 1.154225 GGTTGCCGCGAGAAACATG 60.154 57.895 8.23 0.00 31.63 3.21
677 678 2.332654 GGGTTGCCGCGAGAAACAT 61.333 57.895 8.23 0.00 31.63 2.71
678 679 2.975799 GGGTTGCCGCGAGAAACA 60.976 61.111 8.23 0.00 31.63 2.83
679 680 2.966309 CTGGGTTGCCGCGAGAAAC 61.966 63.158 8.23 8.91 0.00 2.78
680 681 2.668212 CTGGGTTGCCGCGAGAAA 60.668 61.111 8.23 0.00 0.00 2.52
681 682 3.936203 ACTGGGTTGCCGCGAGAA 61.936 61.111 8.23 0.00 0.00 2.87
682 683 4.680237 CACTGGGTTGCCGCGAGA 62.680 66.667 8.23 0.00 0.00 4.04
689 690 0.609131 ATGTACTGGCACTGGGTTGC 60.609 55.000 0.00 0.00 42.18 4.17
690 691 1.541147 CAATGTACTGGCACTGGGTTG 59.459 52.381 0.00 0.00 0.00 3.77
691 692 1.144913 ACAATGTACTGGCACTGGGTT 59.855 47.619 0.00 0.00 0.00 4.11
692 693 0.771127 ACAATGTACTGGCACTGGGT 59.229 50.000 0.00 0.00 0.00 4.51
809 810 0.618968 AGGAGGCCCGATTCAGACTT 60.619 55.000 0.00 0.00 37.58 3.01
817 818 1.908483 GTTGAGAAGGAGGCCCGAT 59.092 57.895 0.00 0.00 37.58 4.18
960 971 2.980233 AAGGTTGCTGCACCGAGC 60.980 61.111 0.00 0.00 42.33 5.03
1013 1027 1.038130 ATAGAACGTCGGGAGCTGCT 61.038 55.000 0.00 0.00 0.00 4.24
1018 1032 2.182825 CACGAAATAGAACGTCGGGAG 58.817 52.381 0.00 0.00 40.64 4.30
1024 1038 2.080286 AGCTGCACGAAATAGAACGT 57.920 45.000 1.02 0.00 43.50 3.99
1028 1042 2.621338 CCTCAAGCTGCACGAAATAGA 58.379 47.619 1.02 0.00 0.00 1.98
1032 1046 2.260869 GGCCTCAAGCTGCACGAAA 61.261 57.895 1.02 0.00 43.05 3.46
1033 1047 2.669569 GGCCTCAAGCTGCACGAA 60.670 61.111 1.02 0.00 43.05 3.85
1040 1054 1.927527 ACCCTGATGGCCTCAAGCT 60.928 57.895 3.32 0.00 43.05 3.74
1041 1055 1.751927 CACCCTGATGGCCTCAAGC 60.752 63.158 3.32 0.00 42.60 4.01
1089 1103 3.488090 GAGCCGGCCGAAAAGACG 61.488 66.667 30.73 9.14 0.00 4.18
1104 1118 1.006805 GCCGGAGTCCATGATCGAG 60.007 63.158 5.05 0.00 0.00 4.04
1220 1234 3.771160 ACGTGTCGAGGATGCCCC 61.771 66.667 0.00 0.00 0.00 5.80
1228 1242 0.660595 AAGTCGAAGCACGTGTCGAG 60.661 55.000 25.79 12.72 46.18 4.04
1317 1331 2.618709 CAGAATGATCCCGTTAAAGGCC 59.381 50.000 1.29 0.00 39.69 5.19
1322 1336 4.019681 AGTTGTCCAGAATGATCCCGTTAA 60.020 41.667 0.00 0.00 39.69 2.01
1324 1338 2.305927 AGTTGTCCAGAATGATCCCGTT 59.694 45.455 0.00 0.00 39.69 4.44
1388 1402 0.739462 CTGCTGCACATTGCCAATGG 60.739 55.000 20.77 11.09 44.23 3.16
1392 1406 2.913060 TGCTGCTGCACATTGCCA 60.913 55.556 14.93 0.00 45.31 4.92
1398 1412 2.203056 AACGTCTGCTGCTGCACA 60.203 55.556 14.93 1.03 45.31 4.57
1409 1423 0.803740 GTAGAGCACCTCGAACGTCT 59.196 55.000 0.00 0.00 35.36 4.18
1496 1601 7.779073 AGTACGTGTTATGCTAATACCTTCTT 58.221 34.615 0.00 0.00 0.00 2.52
1584 1754 6.680810 TGGAACTAACATCTTTTGCTGATTG 58.319 36.000 0.00 0.00 0.00 2.67
1592 1762 9.139174 CGCAAAAATATGGAACTAACATCTTTT 57.861 29.630 0.00 0.00 36.68 2.27
1631 1802 4.251268 ACGAGTAACATTGCCTAACTTCC 58.749 43.478 0.00 0.00 0.00 3.46
1640 1811 2.156098 TGGGGAAACGAGTAACATTGC 58.844 47.619 0.00 0.00 0.00 3.56
1658 2143 6.796705 ACCGAGTTTACTATTCAGTTTTGG 57.203 37.500 0.00 0.00 36.14 3.28
1670 2155 9.605275 GGGTTTCTTTATATTACCGAGTTTACT 57.395 33.333 0.00 0.00 0.00 2.24
1672 2157 7.710475 CCGGGTTTCTTTATATTACCGAGTTTA 59.290 37.037 0.00 0.00 42.42 2.01
1674 2159 6.051074 CCGGGTTTCTTTATATTACCGAGTT 58.949 40.000 0.00 0.00 42.42 3.01
1676 2161 4.450080 GCCGGGTTTCTTTATATTACCGAG 59.550 45.833 2.18 0.00 42.42 4.63
1679 2164 6.267817 GTTTGCCGGGTTTCTTTATATTACC 58.732 40.000 2.18 0.00 0.00 2.85
1732 2218 6.428159 AGTTTCATCTTATCGCTGAGTTGTTT 59.572 34.615 0.00 0.00 0.00 2.83
1733 2219 5.934625 AGTTTCATCTTATCGCTGAGTTGTT 59.065 36.000 0.00 0.00 0.00 2.83
1816 2302 4.575973 AGCGCCATCCAGCCCATC 62.576 66.667 2.29 0.00 0.00 3.51
1860 2346 3.695060 TCCACCGTCTTTGCAAACTTAAA 59.305 39.130 8.05 0.00 0.00 1.52
1871 2357 8.990163 ACCATAAAAATATATCCACCGTCTTT 57.010 30.769 0.00 0.00 0.00 2.52
1875 2361 8.789762 GCTAAACCATAAAAATATATCCACCGT 58.210 33.333 0.00 0.00 0.00 4.83
1876 2362 7.960738 CGCTAAACCATAAAAATATATCCACCG 59.039 37.037 0.00 0.00 0.00 4.94
1890 2376 4.190001 TCGTTTATGCCGCTAAACCATAA 58.810 39.130 14.51 0.00 38.01 1.90
1891 2377 3.794717 TCGTTTATGCCGCTAAACCATA 58.205 40.909 14.51 0.00 38.01 2.74
1907 2393 1.398390 GAAATCATGGCGAGCTCGTTT 59.602 47.619 34.46 25.13 42.22 3.60
1928 2414 2.362169 TCTTCGTCGTCATCAATGCA 57.638 45.000 0.00 0.00 0.00 3.96
1936 2422 1.372997 GGCTGCTTCTTCGTCGTCA 60.373 57.895 0.00 0.00 0.00 4.35
1978 2464 5.962433 AGGAAAATGTTGATCAGAAGCATG 58.038 37.500 0.00 0.00 0.00 4.06
1979 2465 7.201884 CCATAGGAAAATGTTGATCAGAAGCAT 60.202 37.037 0.00 0.00 0.00 3.79
1980 2466 6.095860 CCATAGGAAAATGTTGATCAGAAGCA 59.904 38.462 0.00 0.00 0.00 3.91
1997 2484 2.963101 CCTCGTACATCACCCATAGGAA 59.037 50.000 0.00 0.00 36.73 3.36
2006 2493 0.248539 GACTCGGCCTCGTACATCAC 60.249 60.000 0.00 0.00 37.69 3.06
2020 2507 1.109920 ATCTGGGATGGTCCGACTCG 61.110 60.000 0.00 0.00 37.43 4.18
2021 2508 1.889829 CTATCTGGGATGGTCCGACTC 59.110 57.143 0.00 0.00 37.43 3.36
2022 2509 1.499438 TCTATCTGGGATGGTCCGACT 59.501 52.381 0.00 0.00 37.43 4.18
2023 2510 1.889829 CTCTATCTGGGATGGTCCGAC 59.110 57.143 0.00 0.00 37.43 4.79
2024 2511 1.823648 GCTCTATCTGGGATGGTCCGA 60.824 57.143 0.00 0.00 37.43 4.55
2025 2512 0.605589 GCTCTATCTGGGATGGTCCG 59.394 60.000 0.00 0.00 37.43 4.79
2026 2513 0.605589 CGCTCTATCTGGGATGGTCC 59.394 60.000 0.00 0.00 35.23 4.46
2027 2514 0.037790 GCGCTCTATCTGGGATGGTC 60.038 60.000 0.00 0.00 0.00 4.02
2028 2515 0.470833 AGCGCTCTATCTGGGATGGT 60.471 55.000 2.64 0.00 0.00 3.55
2048 2535 3.052082 CCAGTGCTTGGCTCACCG 61.052 66.667 0.00 0.00 40.87 4.94
2059 2546 1.294659 CTTGAACGAGAGGCCAGTGC 61.295 60.000 5.01 0.00 0.00 4.40
2063 2550 2.347490 GGCTTGAACGAGAGGCCA 59.653 61.111 5.01 0.00 42.08 5.36
2084 2571 2.591753 CCCCATCACATCAGCCGT 59.408 61.111 0.00 0.00 0.00 5.68
2100 2587 3.723348 GCCGACACTTTCACCGCC 61.723 66.667 0.00 0.00 0.00 6.13
2101 2588 3.723348 GGCCGACACTTTCACCGC 61.723 66.667 0.00 0.00 0.00 5.68
2121 2608 6.613755 TTATCGTCGTCATCTAGAATGACA 57.386 37.500 23.35 14.04 46.38 3.58
2122 2609 7.298854 TCATTATCGTCGTCATCTAGAATGAC 58.701 38.462 18.09 18.09 43.55 3.06
2145 2632 2.554142 GCGTTGTCATCCATCATCTCA 58.446 47.619 0.00 0.00 0.00 3.27
2159 2646 1.951510 CAGTCTGCATTGGCGTTGT 59.048 52.632 0.00 0.00 45.35 3.32
2225 2716 1.666553 TGTCAAGGCTACAACCGCG 60.667 57.895 0.00 0.00 33.69 6.46
2228 2719 1.961793 TGTGTGTCAAGGCTACAACC 58.038 50.000 0.00 0.00 0.00 3.77
2230 2721 4.566004 GACTATGTGTGTCAAGGCTACAA 58.434 43.478 0.00 0.00 34.80 2.41
2240 2731 3.099362 GACGATGACGACTATGTGTGTC 58.901 50.000 0.00 0.00 42.66 3.67
2250 2741 1.805945 GCCACTGGACGATGACGAC 60.806 63.158 0.00 0.00 42.66 4.34
2376 2867 5.979517 GCCATGTCTTAAAATTGCCATAGTC 59.020 40.000 0.00 0.00 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.