Multiple sequence alignment - TraesCS7D01G472500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G472500 chr7D 100.000 2573 0 0 1 2573 585598267 585600839 0.000000e+00 4752.0
1 TraesCS7D01G472500 chr7A 92.155 905 52 7 749 1638 676057952 676058852 0.000000e+00 1260.0
2 TraesCS7D01G472500 chr7A 86.124 836 88 11 901 1709 676287830 676286996 0.000000e+00 876.0
3 TraesCS7D01G472500 chr7A 89.928 556 22 9 2032 2570 676059811 676060349 0.000000e+00 686.0
4 TraesCS7D01G472500 chr7A 79.853 407 54 14 219 621 676057571 676057953 3.260000e-69 272.0
5 TraesCS7D01G472500 chr7A 89.130 138 12 2 46 183 676057446 676057580 4.400000e-38 169.0
6 TraesCS7D01G472500 chr7A 85.000 80 11 1 648 727 202161856 202161934 2.120000e-11 80.5
7 TraesCS7D01G472500 chr7A 97.368 38 0 1 620 656 507432807 507432844 2.140000e-06 63.9
8 TraesCS7D01G472500 chr7B 86.951 774 83 12 936 1691 655112154 655111381 0.000000e+00 854.0
9 TraesCS7D01G472500 chr7B 89.275 345 17 4 1314 1656 654981780 654982106 5.120000e-112 414.0
10 TraesCS7D01G472500 chr7B 97.156 211 6 0 1106 1316 654929481 654929691 8.760000e-95 357.0
11 TraesCS7D01G472500 chr7B 92.920 113 6 1 2034 2144 654982346 654982458 2.050000e-36 163.0
12 TraesCS7D01G472500 chr7B 88.182 110 11 2 2037 2144 655111354 655111245 2.080000e-26 130.0
13 TraesCS7D01G472500 chr7B 95.000 60 3 0 1649 1708 654982285 654982344 7.580000e-16 95.3
14 TraesCS7D01G472500 chr6D 92.331 326 25 0 1708 2033 311553881 311554206 5.010000e-127 464.0
15 TraesCS7D01G472500 chr6D 92.331 326 25 0 1708 2033 376495024 376494699 5.010000e-127 464.0
16 TraesCS7D01G472500 chr6D 80.428 327 29 10 2147 2441 129520432 129520109 1.550000e-52 217.0
17 TraesCS7D01G472500 chr6D 75.934 241 40 15 363 592 25946115 25946348 9.740000e-20 108.0
18 TraesCS7D01G472500 chr3D 92.331 326 25 0 1708 2033 228001730 228002055 5.010000e-127 464.0
19 TraesCS7D01G472500 chr3D 77.863 262 49 6 279 533 88429418 88429677 1.230000e-33 154.0
20 TraesCS7D01G472500 chr2D 92.355 327 24 1 1708 2033 251930401 251930727 5.010000e-127 464.0
21 TraesCS7D01G472500 chr2D 92.570 323 24 0 1704 2026 614777521 614777843 5.010000e-127 464.0
22 TraesCS7D01G472500 chr2D 86.325 117 10 3 621 731 650012596 650012480 3.480000e-24 122.0
23 TraesCS7D01G472500 chr2D 81.034 116 13 4 482 593 488365139 488365029 1.640000e-12 84.2
24 TraesCS7D01G472500 chr1B 92.331 326 25 0 1708 2033 145779183 145778858 5.010000e-127 464.0
25 TraesCS7D01G472500 chr1B 86.420 81 8 2 651 731 368076024 368075947 4.560000e-13 86.1
26 TraesCS7D01G472500 chr2B 91.818 330 27 0 1704 2033 374996080 374996409 6.490000e-126 460.0
27 TraesCS7D01G472500 chr2B 100.000 31 0 0 619 649 633577195 633577165 9.940000e-05 58.4
28 TraesCS7D01G472500 chr2B 100.000 31 0 0 619 649 745033696 745033726 9.940000e-05 58.4
29 TraesCS7D01G472500 chr2B 100.000 30 0 0 620 649 571211987 571211958 3.580000e-04 56.5
30 TraesCS7D01G472500 chr2B 100.000 30 0 0 619 648 619282656 619282685 3.580000e-04 56.5
31 TraesCS7D01G472500 chr4B 92.260 323 25 0 1704 2026 176801752 176802074 2.330000e-125 459.0
32 TraesCS7D01G472500 chr4B 92.025 326 26 0 1708 2033 437310471 437310146 2.330000e-125 459.0
33 TraesCS7D01G472500 chr4B 84.874 119 11 4 620 731 672940063 672939945 2.090000e-21 113.0
34 TraesCS7D01G472500 chr4B 91.803 61 4 1 671 731 551241497 551241438 1.640000e-12 84.2
35 TraesCS7D01G472500 chr4B 79.675 123 16 6 619 733 637581361 637581240 2.120000e-11 80.5
36 TraesCS7D01G472500 chr4B 76.860 121 21 3 620 733 638159315 638159435 7.690000e-06 62.1
37 TraesCS7D01G472500 chr5B 93.333 165 10 1 2146 2310 22816365 22816202 2.560000e-60 243.0
38 TraesCS7D01G472500 chr5B 82.022 178 17 1 2147 2309 590558039 590557862 1.240000e-28 137.0
39 TraesCS7D01G472500 chr5B 74.510 255 54 8 295 542 644653390 644653140 1.630000e-17 100.0
40 TraesCS7D01G472500 chr5B 82.353 119 13 5 620 731 710744565 710744448 2.110000e-16 97.1
41 TraesCS7D01G472500 chr3B 80.135 297 32 12 2146 2422 585703441 585703152 2.020000e-46 196.0
42 TraesCS7D01G472500 chr3B 82.558 172 13 4 2147 2301 523557365 523557194 4.470000e-28 135.0
43 TraesCS7D01G472500 chr3B 100.000 29 0 0 567 595 433579632 433579660 1.000000e-03 54.7
44 TraesCS7D01G472500 chr1A 78.317 309 33 14 2147 2425 388981464 388981768 4.400000e-38 169.0
45 TraesCS7D01G472500 chr1A 83.158 190 15 3 2141 2314 8109274 8109462 9.530000e-35 158.0
46 TraesCS7D01G472500 chr6B 94.792 96 5 0 2219 2314 132741800 132741705 1.590000e-32 150.0
47 TraesCS7D01G472500 chr3A 76.952 269 53 8 279 542 105030829 105030565 7.420000e-31 145.0
48 TraesCS7D01G472500 chr3A 100.000 29 0 0 567 595 452989144 452989172 1.000000e-03 54.7
49 TraesCS7D01G472500 chr5D 95.833 72 3 0 2146 2217 446817380 446817451 1.620000e-22 117.0
50 TraesCS7D01G472500 chr5D 76.887 212 39 9 309 516 513939202 513938997 7.530000e-21 111.0
51 TraesCS7D01G472500 chr4A 78.061 196 36 7 330 523 634730688 634730878 1.620000e-22 117.0
52 TraesCS7D01G472500 chr2A 94.444 72 4 0 2146 2217 753240765 753240836 7.530000e-21 111.0
53 TraesCS7D01G472500 chr2A 75.847 236 46 8 314 542 502917124 502917355 2.710000e-20 110.0
54 TraesCS7D01G472500 chr2A 82.883 111 17 2 2223 2331 74144443 74144333 5.860000e-17 99.0
55 TraesCS7D01G472500 chr6A 75.847 236 43 13 292 522 73294220 73294446 9.740000e-20 108.0
56 TraesCS7D01G472500 chr5A 95.238 63 3 0 669 731 389169713 389169651 1.630000e-17 100.0
57 TraesCS7D01G472500 chr5A 81.818 99 10 4 620 711 439564837 439564740 2.750000e-10 76.8
58 TraesCS7D01G472500 chr4D 89.474 76 7 1 656 731 455337929 455338003 7.580000e-16 95.3
59 TraesCS7D01G472500 chr1D 81.967 122 12 5 619 731 19764788 19764668 7.580000e-16 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G472500 chr7D 585598267 585600839 2572 False 4752.00 4752 100.000000 1 2573 1 chr7D.!!$F1 2572
1 TraesCS7D01G472500 chr7A 676286996 676287830 834 True 876.00 876 86.124000 901 1709 1 chr7A.!!$R1 808
2 TraesCS7D01G472500 chr7A 676057446 676060349 2903 False 596.75 1260 87.766500 46 2570 4 chr7A.!!$F3 2524
3 TraesCS7D01G472500 chr7B 655111245 655112154 909 True 492.00 854 87.566500 936 2144 2 chr7B.!!$R1 1208
4 TraesCS7D01G472500 chr7B 654981780 654982458 678 False 224.10 414 92.398333 1314 2144 3 chr7B.!!$F2 830

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
571 576 0.109597 ACGACGGACGATGTACCAAC 60.11 55.0 6.9 0.0 45.77 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1587 1606 0.322975 TTTGCTCTGGACTGCCTCTC 59.677 55.0 0.0 0.0 34.31 3.2 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.946768 AGTGGTTGTTGTCCATGTTCG 59.053 47.619 0.00 0.00 37.30 3.95
21 22 0.665835 TGGTTGTTGTCCATGTTCGC 59.334 50.000 0.00 0.00 0.00 4.70
22 23 0.665835 GGTTGTTGTCCATGTTCGCA 59.334 50.000 0.00 0.00 0.00 5.10
23 24 1.066303 GGTTGTTGTCCATGTTCGCAA 59.934 47.619 0.00 0.00 0.00 4.85
24 25 2.384382 GTTGTTGTCCATGTTCGCAAG 58.616 47.619 0.00 0.00 0.00 4.01
25 26 1.674359 TGTTGTCCATGTTCGCAAGT 58.326 45.000 0.00 0.00 39.48 3.16
26 27 1.333308 TGTTGTCCATGTTCGCAAGTG 59.667 47.619 0.00 0.00 39.48 3.16
27 28 1.333619 GTTGTCCATGTTCGCAAGTGT 59.666 47.619 0.00 0.00 39.48 3.55
28 29 1.674359 TGTCCATGTTCGCAAGTGTT 58.326 45.000 0.00 0.00 39.48 3.32
29 30 1.333308 TGTCCATGTTCGCAAGTGTTG 59.667 47.619 0.00 0.00 39.48 3.33
30 31 0.950836 TCCATGTTCGCAAGTGTTGG 59.049 50.000 0.00 0.00 39.48 3.77
31 32 0.664166 CCATGTTCGCAAGTGTTGGC 60.664 55.000 0.00 0.00 39.48 4.52
32 33 0.664166 CATGTTCGCAAGTGTTGGCC 60.664 55.000 0.00 0.00 39.48 5.36
33 34 2.051345 GTTCGCAAGTGTTGGCCG 60.051 61.111 0.00 0.00 39.48 6.13
34 35 2.515057 TTCGCAAGTGTTGGCCGT 60.515 55.556 0.00 0.00 39.48 5.68
35 36 2.539338 TTCGCAAGTGTTGGCCGTC 61.539 57.895 0.00 0.00 39.48 4.79
36 37 4.025401 CGCAAGTGTTGGCCGTCC 62.025 66.667 0.00 0.00 0.00 4.79
37 38 2.904866 GCAAGTGTTGGCCGTCCA 60.905 61.111 0.00 0.00 41.55 4.02
38 39 2.268076 GCAAGTGTTGGCCGTCCAT 61.268 57.895 0.00 0.00 43.05 3.41
39 40 1.580942 CAAGTGTTGGCCGTCCATG 59.419 57.895 0.00 0.00 43.05 3.66
40 41 1.150536 AAGTGTTGGCCGTCCATGT 59.849 52.632 0.00 0.00 43.05 3.21
41 42 0.467290 AAGTGTTGGCCGTCCATGTT 60.467 50.000 0.00 0.00 43.05 2.71
42 43 1.172180 AGTGTTGGCCGTCCATGTTG 61.172 55.000 0.00 0.00 43.05 3.33
43 44 2.258286 GTTGGCCGTCCATGTTGC 59.742 61.111 0.00 0.00 43.05 4.17
44 45 2.115052 TTGGCCGTCCATGTTGCT 59.885 55.556 0.00 0.00 43.05 3.91
50 51 1.364626 CCGTCCATGTTGCTGAGAGC 61.365 60.000 0.00 0.00 42.82 4.09
94 95 2.228822 AGCGCTTTCAAATTGATTCGGT 59.771 40.909 2.64 3.97 0.00 4.69
104 105 7.447374 TCAAATTGATTCGGTGTGATTAACT 57.553 32.000 0.00 0.00 0.00 2.24
128 129 7.975616 ACTGTGTGCCTAATTAATTAATTGCAG 59.024 33.333 25.00 18.53 36.15 4.41
186 187 9.630098 CTATGTGCCTTATTAATTAATTGCAGG 57.370 33.333 20.76 19.48 30.02 4.85
187 188 6.279882 TGTGCCTTATTAATTAATTGCAGGC 58.720 36.000 28.68 28.68 39.81 4.85
188 189 5.696270 GTGCCTTATTAATTAATTGCAGGCC 59.304 40.000 30.25 23.52 39.26 5.19
189 190 5.602145 TGCCTTATTAATTAATTGCAGGCCT 59.398 36.000 30.25 0.00 39.26 5.19
190 191 6.780031 TGCCTTATTAATTAATTGCAGGCCTA 59.220 34.615 30.25 20.46 39.26 3.93
191 192 7.288852 TGCCTTATTAATTAATTGCAGGCCTAA 59.711 33.333 30.25 20.03 39.26 2.69
192 193 8.314021 GCCTTATTAATTAATTGCAGGCCTAAT 58.686 33.333 27.00 0.00 36.81 1.73
197 198 5.551305 ATTAATTGCAGGCCTAATTTCCC 57.449 39.130 16.79 0.00 0.00 3.97
198 199 1.793414 ATTGCAGGCCTAATTTCCCC 58.207 50.000 3.98 0.00 0.00 4.81
199 200 0.325203 TTGCAGGCCTAATTTCCCCC 60.325 55.000 3.98 0.00 0.00 5.40
218 219 5.708736 CCCCCAAAATAATTTAAAGGCCT 57.291 39.130 0.00 0.00 0.00 5.19
219 220 6.816616 CCCCCAAAATAATTTAAAGGCCTA 57.183 37.500 5.16 0.00 0.00 3.93
220 221 7.201702 CCCCCAAAATAATTTAAAGGCCTAA 57.798 36.000 5.16 0.00 0.00 2.69
221 222 7.811282 CCCCCAAAATAATTTAAAGGCCTAAT 58.189 34.615 5.16 0.00 0.00 1.73
222 223 8.278639 CCCCCAAAATAATTTAAAGGCCTAATT 58.721 33.333 5.16 11.63 0.00 1.40
249 250 8.804688 ACTGTCTATTTAATTATCTGCGAGTC 57.195 34.615 0.00 0.00 0.00 3.36
265 266 6.647481 TCTGCGAGTCTAGTTAGATGTCTATC 59.353 42.308 0.00 0.00 34.39 2.08
267 268 5.406175 GCGAGTCTAGTTAGATGTCTATCGT 59.594 44.000 8.07 0.00 38.38 3.73
270 271 7.148869 CGAGTCTAGTTAGATGTCTATCGTCTG 60.149 44.444 0.00 0.00 41.84 3.51
271 272 7.502696 AGTCTAGTTAGATGTCTATCGTCTGT 58.497 38.462 0.00 0.00 41.84 3.41
272 273 8.640651 AGTCTAGTTAGATGTCTATCGTCTGTA 58.359 37.037 0.00 0.00 41.84 2.74
273 274 9.258826 GTCTAGTTAGATGTCTATCGTCTGTAA 57.741 37.037 0.00 0.00 41.84 2.41
274 275 9.478768 TCTAGTTAGATGTCTATCGTCTGTAAG 57.521 37.037 0.00 0.00 41.84 2.34
275 276 9.478768 CTAGTTAGATGTCTATCGTCTGTAAGA 57.521 37.037 0.00 0.00 41.84 2.10
293 294 7.996644 TCTGTAAGACCAATTAACAGTTTTCCT 59.003 33.333 0.00 0.00 38.67 3.36
295 296 9.629878 TGTAAGACCAATTAACAGTTTTCCTAA 57.370 29.630 0.00 0.00 0.00 2.69
360 365 3.918294 TGCGGGCTTAATTAACTACCT 57.082 42.857 0.00 0.00 0.00 3.08
410 415 5.737290 ACTCGATTTTTAAATTGATTCGGCG 59.263 36.000 0.00 0.00 37.96 6.46
411 416 4.497608 TCGATTTTTAAATTGATTCGGCGC 59.502 37.500 0.00 0.00 34.64 6.53
413 418 2.904011 TTTAAATTGATTCGGCGCGT 57.096 40.000 8.43 0.00 0.00 6.01
416 421 2.168201 AAATTGATTCGGCGCGTAAC 57.832 45.000 8.43 0.00 0.00 2.50
421 426 2.121786 TGATTCGGCGCGTAACTATTC 58.878 47.619 8.43 0.00 0.00 1.75
434 439 7.703621 GCGCGTAACTATTCCCTATTTATATGA 59.296 37.037 8.43 0.00 0.00 2.15
435 440 9.745880 CGCGTAACTATTCCCTATTTATATGAT 57.254 33.333 0.00 0.00 0.00 2.45
466 471 9.008965 ACTAGTTGCACACATAATTAATTGTCA 57.991 29.630 11.05 0.00 0.00 3.58
471 476 7.529158 TGCACACATAATTAATTGTCAGACTG 58.471 34.615 11.05 0.00 0.00 3.51
473 478 8.400947 GCACACATAATTAATTGTCAGACTGAT 58.599 33.333 8.73 0.00 0.00 2.90
485 490 7.601073 TTGTCAGACTGATTAGTTGCATTAG 57.399 36.000 8.73 0.00 37.25 1.73
488 493 6.036517 GTCAGACTGATTAGTTGCATTAGTGG 59.963 42.308 8.73 0.00 37.25 4.00
510 515 9.211485 AGTGGCTTGATTTTTAAATTGATTCAG 57.789 29.630 0.00 0.00 0.00 3.02
511 516 8.992073 GTGGCTTGATTTTTAAATTGATTCAGT 58.008 29.630 0.00 0.00 0.00 3.41
512 517 8.991026 TGGCTTGATTTTTAAATTGATTCAGTG 58.009 29.630 0.00 0.00 0.00 3.66
513 518 7.959109 GGCTTGATTTTTAAATTGATTCAGTGC 59.041 33.333 0.00 0.00 0.00 4.40
514 519 8.715088 GCTTGATTTTTAAATTGATTCAGTGCT 58.285 29.630 0.00 0.00 0.00 4.40
516 521 9.761504 TTGATTTTTAAATTGATTCAGTGCTCA 57.238 25.926 0.00 0.00 0.00 4.26
517 522 9.414295 TGATTTTTAAATTGATTCAGTGCTCAG 57.586 29.630 0.00 0.00 0.00 3.35
518 523 9.415544 GATTTTTAAATTGATTCAGTGCTCAGT 57.584 29.630 0.00 0.00 0.00 3.41
519 524 9.768662 ATTTTTAAATTGATTCAGTGCTCAGTT 57.231 25.926 0.00 0.00 0.00 3.16
520 525 9.598517 TTTTTAAATTGATTCAGTGCTCAGTTT 57.401 25.926 15.29 15.29 36.00 2.66
522 527 9.598517 TTTAAATTGATTCAGTGCTCAGTTTTT 57.401 25.926 15.82 10.51 34.45 1.94
553 558 8.795786 TTTTCTCATTAATGTGTGTGCTAAAC 57.204 30.769 14.97 0.00 0.00 2.01
554 559 6.164408 TCTCATTAATGTGTGTGCTAAACG 57.836 37.500 14.97 0.00 0.00 3.60
555 560 5.929415 TCTCATTAATGTGTGTGCTAAACGA 59.071 36.000 14.97 0.00 0.00 3.85
556 561 5.922546 TCATTAATGTGTGTGCTAAACGAC 58.077 37.500 14.97 0.00 0.00 4.34
557 562 2.941891 AATGTGTGTGCTAAACGACG 57.058 45.000 0.00 0.00 0.00 5.12
558 563 1.144969 ATGTGTGTGCTAAACGACGG 58.855 50.000 0.00 0.00 0.00 4.79
560 565 0.505655 GTGTGTGCTAAACGACGGAC 59.494 55.000 0.00 0.00 0.00 4.79
562 567 0.661187 GTGTGCTAAACGACGGACGA 60.661 55.000 6.90 0.00 45.77 4.20
566 571 1.468127 TGCTAAACGACGGACGATGTA 59.532 47.619 6.90 0.00 45.77 2.29
567 572 1.842546 GCTAAACGACGGACGATGTAC 59.157 52.381 6.90 0.00 45.77 2.90
571 576 0.109597 ACGACGGACGATGTACCAAC 60.110 55.000 6.90 0.00 45.77 3.77
573 578 1.792993 CGACGGACGATGTACCAACTC 60.793 57.143 0.00 0.00 45.77 3.01
593 598 9.121658 CCAACTCCCCTTTAATAGTAAAGATTC 57.878 37.037 21.17 0.00 46.28 2.52
619 624 9.832445 CTATCATTTATGTTTAGTACAGTGGGT 57.168 33.333 0.00 0.00 40.83 4.51
643 648 9.866798 GGTACTCCCTCCGTTTATAAATATAAG 57.133 37.037 0.31 0.00 30.57 1.73
646 651 9.377238 ACTCCCTCCGTTTATAAATATAAGTCT 57.623 33.333 0.31 0.00 30.57 3.24
669 674 3.976793 TTTAGATACGGACTACCTGCG 57.023 47.619 0.00 0.00 40.15 5.18
670 675 1.888215 TAGATACGGACTACCTGCGG 58.112 55.000 0.00 0.00 38.21 5.69
671 676 0.182061 AGATACGGACTACCTGCGGA 59.818 55.000 0.00 0.00 38.21 5.54
672 677 0.592148 GATACGGACTACCTGCGGAG 59.408 60.000 0.00 0.00 38.21 4.63
687 692 2.619013 CGGAGCAAAATGAGTGAACC 57.381 50.000 0.00 0.00 0.00 3.62
688 693 2.154462 CGGAGCAAAATGAGTGAACCT 58.846 47.619 0.00 0.00 0.00 3.50
689 694 3.334691 CGGAGCAAAATGAGTGAACCTA 58.665 45.455 0.00 0.00 0.00 3.08
690 695 3.125316 CGGAGCAAAATGAGTGAACCTAC 59.875 47.826 0.00 0.00 0.00 3.18
691 696 4.072131 GGAGCAAAATGAGTGAACCTACA 58.928 43.478 0.00 0.00 0.00 2.74
692 697 4.518970 GGAGCAAAATGAGTGAACCTACAA 59.481 41.667 0.00 0.00 0.00 2.41
693 698 5.183904 GGAGCAAAATGAGTGAACCTACAAT 59.816 40.000 0.00 0.00 0.00 2.71
694 699 6.259550 AGCAAAATGAGTGAACCTACAATC 57.740 37.500 0.00 0.00 35.78 2.67
695 700 6.006449 AGCAAAATGAGTGAACCTACAATCT 58.994 36.000 0.00 0.00 36.14 2.40
696 701 7.168219 AGCAAAATGAGTGAACCTACAATCTA 58.832 34.615 0.00 0.00 36.14 1.98
697 702 7.665559 AGCAAAATGAGTGAACCTACAATCTAA 59.334 33.333 0.00 0.00 36.14 2.10
698 703 8.296713 GCAAAATGAGTGAACCTACAATCTAAA 58.703 33.333 0.00 0.00 36.14 1.85
727 732 9.431887 ACATTTATATACATCCGTATGTGGTTC 57.568 33.333 3.56 0.00 45.99 3.62
728 733 9.430623 CATTTATATACATCCGTATGTGGTTCA 57.569 33.333 3.56 0.00 45.99 3.18
735 740 7.962964 ACATCCGTATGTGGTTCATATTTAG 57.037 36.000 0.00 0.00 44.79 1.85
736 741 7.732025 ACATCCGTATGTGGTTCATATTTAGA 58.268 34.615 0.00 0.00 44.79 2.10
737 742 8.208224 ACATCCGTATGTGGTTCATATTTAGAA 58.792 33.333 0.00 0.00 44.79 2.10
738 743 9.051679 CATCCGTATGTGGTTCATATTTAGAAA 57.948 33.333 0.00 0.00 40.54 2.52
739 744 8.428186 TCCGTATGTGGTTCATATTTAGAAAC 57.572 34.615 0.00 0.00 40.54 2.78
740 745 7.223193 TCCGTATGTGGTTCATATTTAGAAACG 59.777 37.037 0.00 0.00 40.54 3.60
741 746 7.342194 CGTATGTGGTTCATATTTAGAAACGG 58.658 38.462 0.00 0.00 40.54 4.44
742 747 7.223193 CGTATGTGGTTCATATTTAGAAACGGA 59.777 37.037 0.00 0.00 40.54 4.69
743 748 7.931578 ATGTGGTTCATATTTAGAAACGGAA 57.068 32.000 0.00 0.00 35.47 4.30
744 749 7.372451 TGTGGTTCATATTTAGAAACGGAAG 57.628 36.000 0.00 0.00 35.47 3.46
745 750 6.373216 TGTGGTTCATATTTAGAAACGGAAGG 59.627 38.462 0.00 0.00 35.47 3.46
746 751 6.596497 GTGGTTCATATTTAGAAACGGAAGGA 59.404 38.462 0.00 0.00 35.47 3.36
747 752 6.596497 TGGTTCATATTTAGAAACGGAAGGAC 59.404 38.462 0.00 0.00 35.47 3.85
763 768 9.847224 AACGGAAGGACTATTAATGTCAAATAT 57.153 29.630 15.37 2.55 36.26 1.28
811 816 6.944557 TTCTAACTTGTCATCATGTACACG 57.055 37.500 0.00 0.00 32.79 4.49
822 827 3.063485 TCATGTACACGTGTTGACCATG 58.937 45.455 28.55 27.52 37.79 3.66
823 828 2.605837 TGTACACGTGTTGACCATGT 57.394 45.000 28.55 0.00 44.24 3.21
861 866 9.692749 TCTTCATCGTTACTCCATATCATTTAC 57.307 33.333 0.00 0.00 0.00 2.01
1010 1023 1.352083 GGGTGCTCTATGGCTATGGA 58.648 55.000 0.00 0.00 0.00 3.41
1030 1043 4.503741 GAGAAGATCATTCTCCTCCTCG 57.496 50.000 17.39 0.00 39.11 4.63
1031 1044 2.627699 AGAAGATCATTCTCCTCCTCGC 59.372 50.000 0.00 0.00 0.00 5.03
1084 1103 2.671619 CGGATTGCCCCAACGTGT 60.672 61.111 0.00 0.00 0.00 4.49
1141 1160 3.137484 GGCACGAAGCTCATGTACA 57.863 52.632 0.00 0.00 44.79 2.90
1171 1190 4.580551 GCATGATGCGCCAAGGCC 62.581 66.667 4.18 0.00 37.98 5.19
1353 1372 1.011968 GCATGAACGACTACGCACCA 61.012 55.000 0.00 0.00 43.96 4.17
1468 1487 0.614134 GGAGAAGTGTAGGGACCGGT 60.614 60.000 6.92 6.92 0.00 5.28
1580 1599 4.020218 ACTGTTAGGCATATGAGTGTGTGT 60.020 41.667 6.97 0.00 0.00 3.72
1586 1605 3.696051 GGCATATGAGTGTGTGTTGGATT 59.304 43.478 6.97 0.00 0.00 3.01
1587 1606 4.439153 GGCATATGAGTGTGTGTTGGATTG 60.439 45.833 6.97 0.00 0.00 2.67
1648 2573 3.141002 ACACCGCTACATAGTGTTACG 57.859 47.619 0.00 0.00 41.86 3.18
1709 2825 3.279434 CCAGGTTAGGCCAATCTGTTAC 58.721 50.000 20.08 0.00 42.92 2.50
1710 2826 3.054361 CCAGGTTAGGCCAATCTGTTACT 60.054 47.826 20.08 0.00 42.92 2.24
1711 2827 4.192317 CAGGTTAGGCCAATCTGTTACTC 58.808 47.826 15.93 0.00 40.06 2.59
1712 2828 3.200165 AGGTTAGGCCAATCTGTTACTCC 59.800 47.826 5.01 0.00 40.61 3.85
1713 2829 3.542648 GTTAGGCCAATCTGTTACTCCC 58.457 50.000 5.01 0.00 0.00 4.30
1714 2830 1.972588 AGGCCAATCTGTTACTCCCT 58.027 50.000 5.01 0.00 0.00 4.20
1715 2831 1.840635 AGGCCAATCTGTTACTCCCTC 59.159 52.381 5.01 0.00 0.00 4.30
1716 2832 1.559682 GGCCAATCTGTTACTCCCTCA 59.440 52.381 0.00 0.00 0.00 3.86
1717 2833 2.173569 GGCCAATCTGTTACTCCCTCAT 59.826 50.000 0.00 0.00 0.00 2.90
1718 2834 3.372025 GGCCAATCTGTTACTCCCTCATT 60.372 47.826 0.00 0.00 0.00 2.57
1719 2835 4.273318 GCCAATCTGTTACTCCCTCATTT 58.727 43.478 0.00 0.00 0.00 2.32
1720 2836 4.706962 GCCAATCTGTTACTCCCTCATTTT 59.293 41.667 0.00 0.00 0.00 1.82
1721 2837 5.163612 GCCAATCTGTTACTCCCTCATTTTC 60.164 44.000 0.00 0.00 0.00 2.29
1722 2838 5.065218 CCAATCTGTTACTCCCTCATTTTCG 59.935 44.000 0.00 0.00 0.00 3.46
1723 2839 4.202245 TCTGTTACTCCCTCATTTTCGG 57.798 45.455 0.00 0.00 0.00 4.30
1724 2840 3.581332 TCTGTTACTCCCTCATTTTCGGT 59.419 43.478 0.00 0.00 0.00 4.69
1725 2841 4.041198 TCTGTTACTCCCTCATTTTCGGTT 59.959 41.667 0.00 0.00 0.00 4.44
1726 2842 4.721132 TGTTACTCCCTCATTTTCGGTTT 58.279 39.130 0.00 0.00 0.00 3.27
1727 2843 5.867330 TGTTACTCCCTCATTTTCGGTTTA 58.133 37.500 0.00 0.00 0.00 2.01
1728 2844 6.478129 TGTTACTCCCTCATTTTCGGTTTAT 58.522 36.000 0.00 0.00 0.00 1.40
1729 2845 7.622713 TGTTACTCCCTCATTTTCGGTTTATA 58.377 34.615 0.00 0.00 0.00 0.98
1730 2846 7.767198 TGTTACTCCCTCATTTTCGGTTTATAG 59.233 37.037 0.00 0.00 0.00 1.31
1731 2847 5.681639 ACTCCCTCATTTTCGGTTTATAGG 58.318 41.667 0.00 0.00 0.00 2.57
1732 2848 5.043737 TCCCTCATTTTCGGTTTATAGGG 57.956 43.478 0.00 0.00 43.23 3.53
1733 2849 3.568430 CCCTCATTTTCGGTTTATAGGGC 59.432 47.826 0.00 0.00 36.30 5.19
1734 2850 4.461198 CCTCATTTTCGGTTTATAGGGCT 58.539 43.478 0.00 0.00 0.00 5.19
1735 2851 4.887655 CCTCATTTTCGGTTTATAGGGCTT 59.112 41.667 0.00 0.00 0.00 4.35
1736 2852 6.059484 CCTCATTTTCGGTTTATAGGGCTTA 58.941 40.000 0.00 0.00 0.00 3.09
1737 2853 6.715264 CCTCATTTTCGGTTTATAGGGCTTAT 59.285 38.462 0.00 0.00 0.00 1.73
1738 2854 7.881232 CCTCATTTTCGGTTTATAGGGCTTATA 59.119 37.037 0.00 0.00 0.00 0.98
1739 2855 9.449719 CTCATTTTCGGTTTATAGGGCTTATAT 57.550 33.333 0.00 0.00 0.00 0.86
1740 2856 9.802039 TCATTTTCGGTTTATAGGGCTTATATT 57.198 29.630 0.00 0.00 0.00 1.28
1789 2905 9.990868 ATAAGTCTTAATTTAGTTGTTCCCCAT 57.009 29.630 0.00 0.00 0.00 4.00
1790 2906 7.939784 AGTCTTAATTTAGTTGTTCCCCATC 57.060 36.000 0.00 0.00 0.00 3.51
1791 2907 7.466804 AGTCTTAATTTAGTTGTTCCCCATCA 58.533 34.615 0.00 0.00 0.00 3.07
1792 2908 7.947890 AGTCTTAATTTAGTTGTTCCCCATCAA 59.052 33.333 0.00 0.00 0.00 2.57
1793 2909 8.581578 GTCTTAATTTAGTTGTTCCCCATCAAA 58.418 33.333 0.00 0.00 0.00 2.69
1794 2910 9.320295 TCTTAATTTAGTTGTTCCCCATCAAAT 57.680 29.630 0.00 0.00 0.00 2.32
1795 2911 9.369904 CTTAATTTAGTTGTTCCCCATCAAATG 57.630 33.333 0.00 0.00 0.00 2.32
1796 2912 6.933514 ATTTAGTTGTTCCCCATCAAATGT 57.066 33.333 0.00 0.00 0.00 2.71
1797 2913 6.739331 TTTAGTTGTTCCCCATCAAATGTT 57.261 33.333 0.00 0.00 0.00 2.71
1798 2914 4.871933 AGTTGTTCCCCATCAAATGTTC 57.128 40.909 0.00 0.00 0.00 3.18
1799 2915 4.222336 AGTTGTTCCCCATCAAATGTTCA 58.778 39.130 0.00 0.00 0.00 3.18
1800 2916 4.281688 AGTTGTTCCCCATCAAATGTTCAG 59.718 41.667 0.00 0.00 0.00 3.02
1801 2917 4.111255 TGTTCCCCATCAAATGTTCAGA 57.889 40.909 0.00 0.00 0.00 3.27
1802 2918 4.676109 TGTTCCCCATCAAATGTTCAGAT 58.324 39.130 0.00 0.00 0.00 2.90
1803 2919 5.085920 TGTTCCCCATCAAATGTTCAGATT 58.914 37.500 0.00 0.00 0.00 2.40
1804 2920 5.543405 TGTTCCCCATCAAATGTTCAGATTT 59.457 36.000 0.00 0.00 0.00 2.17
1805 2921 5.920193 TCCCCATCAAATGTTCAGATTTC 57.080 39.130 0.00 0.00 0.00 2.17
1806 2922 5.331906 TCCCCATCAAATGTTCAGATTTCA 58.668 37.500 0.00 0.00 0.00 2.69
1807 2923 5.779260 TCCCCATCAAATGTTCAGATTTCAA 59.221 36.000 0.00 0.00 0.00 2.69
1808 2924 6.071221 TCCCCATCAAATGTTCAGATTTCAAG 60.071 38.462 0.00 0.00 0.00 3.02
1809 2925 6.103997 CCCATCAAATGTTCAGATTTCAAGG 58.896 40.000 0.00 0.00 0.00 3.61
1810 2926 6.295462 CCCATCAAATGTTCAGATTTCAAGGT 60.295 38.462 0.00 0.00 0.00 3.50
1811 2927 6.588756 CCATCAAATGTTCAGATTTCAAGGTG 59.411 38.462 0.00 0.00 0.00 4.00
1812 2928 5.531634 TCAAATGTTCAGATTTCAAGGTGC 58.468 37.500 0.00 0.00 0.00 5.01
1813 2929 5.068855 TCAAATGTTCAGATTTCAAGGTGCA 59.931 36.000 0.00 0.00 0.00 4.57
1814 2930 5.534207 AATGTTCAGATTTCAAGGTGCAA 57.466 34.783 0.00 0.00 0.00 4.08
1815 2931 5.733620 ATGTTCAGATTTCAAGGTGCAAT 57.266 34.783 0.00 0.00 0.00 3.56
1816 2932 6.839124 ATGTTCAGATTTCAAGGTGCAATA 57.161 33.333 0.00 0.00 0.00 1.90
1817 2933 6.647334 TGTTCAGATTTCAAGGTGCAATAA 57.353 33.333 0.00 0.00 0.00 1.40
1818 2934 7.048629 TGTTCAGATTTCAAGGTGCAATAAA 57.951 32.000 0.00 0.00 0.00 1.40
1819 2935 7.669427 TGTTCAGATTTCAAGGTGCAATAAAT 58.331 30.769 0.00 0.00 0.00 1.40
1820 2936 7.814107 TGTTCAGATTTCAAGGTGCAATAAATC 59.186 33.333 0.00 0.28 37.00 2.17
1821 2937 7.465353 TCAGATTTCAAGGTGCAATAAATCA 57.535 32.000 16.33 2.33 38.45 2.57
1822 2938 8.070034 TCAGATTTCAAGGTGCAATAAATCAT 57.930 30.769 16.33 5.63 38.45 2.45
1823 2939 8.533657 TCAGATTTCAAGGTGCAATAAATCATT 58.466 29.630 16.33 0.00 38.45 2.57
1824 2940 8.600625 CAGATTTCAAGGTGCAATAAATCATTG 58.399 33.333 16.33 6.91 45.87 2.82
1875 2991 5.477607 ATGCATGTATTTTATGCCTGCAT 57.522 34.783 9.87 9.87 46.03 3.96
1877 2993 3.430895 GCATGTATTTTATGCCTGCATGC 59.569 43.478 11.82 11.82 46.57 4.06
1878 2994 4.623002 CATGTATTTTATGCCTGCATGCA 58.377 39.130 21.29 21.29 46.94 3.96
1915 3031 9.809096 TGCATTAGTAAACACAATTTTTGAAGA 57.191 25.926 0.00 0.00 0.00 2.87
1924 3040 8.706656 AACACAATTTTTGAAGAAAACAAACG 57.293 26.923 0.00 0.00 37.05 3.60
1925 3041 6.794636 ACACAATTTTTGAAGAAAACAAACGC 59.205 30.769 0.00 0.00 37.05 4.84
1926 3042 6.794158 CACAATTTTTGAAGAAAACAAACGCA 59.206 30.769 0.00 0.00 37.05 5.24
1927 3043 7.481169 CACAATTTTTGAAGAAAACAAACGCAT 59.519 29.630 0.00 0.00 37.05 4.73
1928 3044 7.691877 ACAATTTTTGAAGAAAACAAACGCATC 59.308 29.630 0.00 0.00 37.05 3.91
1929 3045 6.712241 TTTTTGAAGAAAACAAACGCATCA 57.288 29.167 0.00 0.00 37.05 3.07
1930 3046 6.712241 TTTTGAAGAAAACAAACGCATCAA 57.288 29.167 0.00 0.00 37.05 2.57
1931 3047 6.900568 TTTGAAGAAAACAAACGCATCAAT 57.099 29.167 0.00 0.00 33.25 2.57
1932 3048 6.900568 TTGAAGAAAACAAACGCATCAATT 57.099 29.167 0.00 0.00 0.00 2.32
1933 3049 6.271396 TGAAGAAAACAAACGCATCAATTG 57.729 33.333 0.00 0.00 0.00 2.32
1934 3050 6.038985 TGAAGAAAACAAACGCATCAATTGA 58.961 32.000 11.26 11.26 0.00 2.57
1935 3051 6.198778 TGAAGAAAACAAACGCATCAATTGAG 59.801 34.615 14.54 7.33 0.00 3.02
1936 3052 5.591099 AGAAAACAAACGCATCAATTGAGT 58.409 33.333 14.54 3.63 40.39 3.41
1937 3053 5.459762 AGAAAACAAACGCATCAATTGAGTG 59.540 36.000 14.54 13.90 38.47 3.51
1938 3054 4.566545 AACAAACGCATCAATTGAGTGA 57.433 36.364 14.54 0.00 38.47 3.41
1939 3055 4.771590 ACAAACGCATCAATTGAGTGAT 57.228 36.364 14.54 5.10 38.47 3.06
1940 3056 5.125100 ACAAACGCATCAATTGAGTGATT 57.875 34.783 14.54 10.25 38.47 2.57
1941 3057 5.531634 ACAAACGCATCAATTGAGTGATTT 58.468 33.333 14.54 9.05 38.47 2.17
1942 3058 5.984926 ACAAACGCATCAATTGAGTGATTTT 59.015 32.000 14.54 10.96 38.47 1.82
1943 3059 6.074195 ACAAACGCATCAATTGAGTGATTTTG 60.074 34.615 14.54 20.20 38.47 2.44
1944 3060 3.922240 ACGCATCAATTGAGTGATTTTGC 59.078 39.130 14.54 14.77 36.95 3.68
1945 3061 3.921630 CGCATCAATTGAGTGATTTTGCA 59.078 39.130 21.44 0.00 36.04 4.08
1946 3062 4.386350 CGCATCAATTGAGTGATTTTGCAA 59.614 37.500 21.44 0.00 36.04 4.08
1947 3063 5.107414 CGCATCAATTGAGTGATTTTGCAAA 60.107 36.000 21.44 8.05 36.04 3.68
1948 3064 6.075280 GCATCAATTGAGTGATTTTGCAAAC 58.925 36.000 12.39 0.37 36.04 2.93
1949 3065 6.073440 GCATCAATTGAGTGATTTTGCAAACT 60.073 34.615 12.39 6.55 36.04 2.66
1950 3066 7.116662 GCATCAATTGAGTGATTTTGCAAACTA 59.883 33.333 12.39 0.00 36.04 2.24
1951 3067 7.928908 TCAATTGAGTGATTTTGCAAACTAC 57.071 32.000 12.39 11.01 0.00 2.73
1952 3068 7.487484 TCAATTGAGTGATTTTGCAAACTACA 58.513 30.769 12.39 9.47 0.00 2.74
1953 3069 7.978414 TCAATTGAGTGATTTTGCAAACTACAA 59.022 29.630 12.39 12.28 0.00 2.41
1954 3070 8.602328 CAATTGAGTGATTTTGCAAACTACAAA 58.398 29.630 12.39 9.89 35.30 2.83
1956 3072 8.539770 TTGAGTGATTTTGCAAACTACAAAAA 57.460 26.923 12.39 0.00 46.67 1.94
1957 3073 8.715191 TGAGTGATTTTGCAAACTACAAAAAT 57.285 26.923 12.39 0.00 46.67 1.82
1958 3074 9.160496 TGAGTGATTTTGCAAACTACAAAAATT 57.840 25.926 12.39 0.00 46.67 1.82
1959 3075 9.424659 GAGTGATTTTGCAAACTACAAAAATTG 57.575 29.630 12.39 0.00 46.67 2.32
1960 3076 8.945057 AGTGATTTTGCAAACTACAAAAATTGT 58.055 25.926 12.39 0.99 46.67 2.71
1961 3077 9.553418 GTGATTTTGCAAACTACAAAAATTGTT 57.447 25.926 12.39 0.00 46.67 2.83
1966 3082 9.766277 TTTGCAAACTACAAAAATTGTTTCATC 57.234 25.926 8.05 0.00 42.22 2.92
1967 3083 8.484641 TGCAAACTACAAAAATTGTTTCATCA 57.515 26.923 0.54 0.00 42.22 3.07
1968 3084 8.386606 TGCAAACTACAAAAATTGTTTCATCAC 58.613 29.630 0.54 0.00 42.22 3.06
1969 3085 8.603181 GCAAACTACAAAAATTGTTTCATCACT 58.397 29.630 0.54 0.00 42.22 3.41
1971 3087 9.868277 AAACTACAAAAATTGTTTCATCACTCA 57.132 25.926 0.54 0.00 42.22 3.41
1972 3088 8.856490 ACTACAAAAATTGTTTCATCACTCAC 57.144 30.769 0.54 0.00 42.22 3.51
1973 3089 7.920682 ACTACAAAAATTGTTTCATCACTCACC 59.079 33.333 0.54 0.00 42.22 4.02
1974 3090 6.638610 ACAAAAATTGTTTCATCACTCACCA 58.361 32.000 0.00 0.00 42.22 4.17
1975 3091 7.274447 ACAAAAATTGTTTCATCACTCACCAT 58.726 30.769 0.00 0.00 42.22 3.55
1976 3092 7.439056 ACAAAAATTGTTTCATCACTCACCATC 59.561 33.333 0.00 0.00 42.22 3.51
1977 3093 6.906157 AAATTGTTTCATCACTCACCATCT 57.094 33.333 0.00 0.00 0.00 2.90
1978 3094 8.408043 AAAATTGTTTCATCACTCACCATCTA 57.592 30.769 0.00 0.00 0.00 1.98
1979 3095 8.585471 AAATTGTTTCATCACTCACCATCTAT 57.415 30.769 0.00 0.00 0.00 1.98
1980 3096 8.585471 AATTGTTTCATCACTCACCATCTATT 57.415 30.769 0.00 0.00 0.00 1.73
1981 3097 8.585471 ATTGTTTCATCACTCACCATCTATTT 57.415 30.769 0.00 0.00 0.00 1.40
1982 3098 8.408043 TTGTTTCATCACTCACCATCTATTTT 57.592 30.769 0.00 0.00 0.00 1.82
1983 3099 7.819644 TGTTTCATCACTCACCATCTATTTTG 58.180 34.615 0.00 0.00 0.00 2.44
1984 3100 7.094248 TGTTTCATCACTCACCATCTATTTTGG 60.094 37.037 0.00 0.00 40.26 3.28
1986 3102 6.484288 TCATCACTCACCATCTATTTTGGTT 58.516 36.000 0.00 0.00 45.19 3.67
1987 3103 6.375174 TCATCACTCACCATCTATTTTGGTTG 59.625 38.462 0.00 0.00 45.19 3.77
1988 3104 5.009631 TCACTCACCATCTATTTTGGTTGG 58.990 41.667 0.00 0.00 45.19 3.77
1989 3105 4.766891 CACTCACCATCTATTTTGGTTGGT 59.233 41.667 0.00 0.00 45.19 3.67
1993 3109 5.255397 ACCATCTATTTTGGTTGGTGAGA 57.745 39.130 0.00 0.00 45.19 3.27
1994 3110 5.831103 ACCATCTATTTTGGTTGGTGAGAT 58.169 37.500 0.00 0.00 45.19 2.75
1995 3111 6.256053 ACCATCTATTTTGGTTGGTGAGATT 58.744 36.000 0.00 0.00 45.19 2.40
1996 3112 6.725834 ACCATCTATTTTGGTTGGTGAGATTT 59.274 34.615 0.00 0.00 45.19 2.17
1997 3113 7.235399 ACCATCTATTTTGGTTGGTGAGATTTT 59.765 33.333 0.00 0.00 45.19 1.82
1998 3114 8.096414 CCATCTATTTTGGTTGGTGAGATTTTT 58.904 33.333 0.00 0.00 0.00 1.94
1999 3115 8.928733 CATCTATTTTGGTTGGTGAGATTTTTG 58.071 33.333 0.00 0.00 0.00 2.44
2000 3116 8.243961 TCTATTTTGGTTGGTGAGATTTTTGA 57.756 30.769 0.00 0.00 0.00 2.69
2001 3117 8.700051 TCTATTTTGGTTGGTGAGATTTTTGAA 58.300 29.630 0.00 0.00 0.00 2.69
2002 3118 9.492973 CTATTTTGGTTGGTGAGATTTTTGAAT 57.507 29.630 0.00 0.00 0.00 2.57
2003 3119 8.750515 ATTTTGGTTGGTGAGATTTTTGAATT 57.249 26.923 0.00 0.00 0.00 2.17
2004 3120 7.551035 TTTGGTTGGTGAGATTTTTGAATTG 57.449 32.000 0.00 0.00 0.00 2.32
2005 3121 6.477053 TGGTTGGTGAGATTTTTGAATTGA 57.523 33.333 0.00 0.00 0.00 2.57
2006 3122 6.514947 TGGTTGGTGAGATTTTTGAATTGAG 58.485 36.000 0.00 0.00 0.00 3.02
2007 3123 5.406477 GGTTGGTGAGATTTTTGAATTGAGC 59.594 40.000 0.00 0.00 0.00 4.26
2008 3124 5.138125 TGGTGAGATTTTTGAATTGAGCC 57.862 39.130 0.00 0.00 0.00 4.70
2009 3125 4.021192 TGGTGAGATTTTTGAATTGAGCCC 60.021 41.667 0.00 0.00 0.00 5.19
2010 3126 4.221482 GGTGAGATTTTTGAATTGAGCCCT 59.779 41.667 0.00 0.00 0.00 5.19
2011 3127 5.418840 GGTGAGATTTTTGAATTGAGCCCTA 59.581 40.000 0.00 0.00 0.00 3.53
2012 3128 6.097412 GGTGAGATTTTTGAATTGAGCCCTAT 59.903 38.462 0.00 0.00 0.00 2.57
2013 3129 7.285401 GGTGAGATTTTTGAATTGAGCCCTATA 59.715 37.037 0.00 0.00 0.00 1.31
2014 3130 8.686334 GTGAGATTTTTGAATTGAGCCCTATAA 58.314 33.333 0.00 0.00 0.00 0.98
2015 3131 9.253832 TGAGATTTTTGAATTGAGCCCTATAAA 57.746 29.630 0.00 0.00 0.00 1.40
2016 3132 9.521503 GAGATTTTTGAATTGAGCCCTATAAAC 57.478 33.333 0.00 0.00 0.00 2.01
2017 3133 8.478066 AGATTTTTGAATTGAGCCCTATAAACC 58.522 33.333 0.00 0.00 0.00 3.27
2018 3134 5.828299 TTTGAATTGAGCCCTATAAACCG 57.172 39.130 0.00 0.00 0.00 4.44
2019 3135 4.764050 TGAATTGAGCCCTATAAACCGA 57.236 40.909 0.00 0.00 0.00 4.69
2020 3136 5.105567 TGAATTGAGCCCTATAAACCGAA 57.894 39.130 0.00 0.00 0.00 4.30
2021 3137 5.502079 TGAATTGAGCCCTATAAACCGAAA 58.498 37.500 0.00 0.00 0.00 3.46
2022 3138 5.946972 TGAATTGAGCCCTATAAACCGAAAA 59.053 36.000 0.00 0.00 0.00 2.29
2023 3139 6.094881 TGAATTGAGCCCTATAAACCGAAAAG 59.905 38.462 0.00 0.00 0.00 2.27
2025 3141 3.520317 TGAGCCCTATAAACCGAAAAGGA 59.480 43.478 0.00 0.00 45.00 3.36
2026 3142 4.165372 TGAGCCCTATAAACCGAAAAGGAT 59.835 41.667 0.00 0.00 45.00 3.24
2027 3143 4.461198 AGCCCTATAAACCGAAAAGGATG 58.539 43.478 0.00 0.00 45.00 3.51
2028 3144 4.079958 AGCCCTATAAACCGAAAAGGATGT 60.080 41.667 0.00 0.00 45.00 3.06
2029 3145 5.131475 AGCCCTATAAACCGAAAAGGATGTA 59.869 40.000 0.00 0.00 45.00 2.29
2030 3146 5.469084 GCCCTATAAACCGAAAAGGATGTAG 59.531 44.000 0.00 0.00 45.00 2.74
2031 3147 6.589135 CCCTATAAACCGAAAAGGATGTAGT 58.411 40.000 0.00 0.00 45.00 2.73
2032 3148 7.687592 GCCCTATAAACCGAAAAGGATGTAGTA 60.688 40.741 0.00 0.00 45.00 1.82
2150 3269 5.382616 TGTGTCTGAGACTACAAGAACCTA 58.617 41.667 14.42 0.00 33.15 3.08
2157 3276 7.776030 TCTGAGACTACAAGAACCTAGGAATAG 59.224 40.741 17.98 9.49 0.00 1.73
2281 3400 2.162681 GGATTGGTTTGGTCTGGACAG 58.837 52.381 3.10 0.00 0.00 3.51
2284 3403 1.801242 TGGTTTGGTCTGGACAGAGA 58.199 50.000 1.56 0.00 38.27 3.10
2348 3482 4.457496 CATGCAGCCTCGACGGGT 62.457 66.667 0.00 0.51 46.68 5.28
2374 3508 0.811616 CGCTAGGCTAAGGGTTGCTG 60.812 60.000 0.00 0.00 0.00 4.41
2415 3549 1.691196 CGGCCAATCTCTCTCTCTCT 58.309 55.000 2.24 0.00 0.00 3.10
2416 3550 1.608590 CGGCCAATCTCTCTCTCTCTC 59.391 57.143 2.24 0.00 0.00 3.20
2417 3551 2.749466 CGGCCAATCTCTCTCTCTCTCT 60.749 54.545 2.24 0.00 0.00 3.10
2418 3552 2.887152 GGCCAATCTCTCTCTCTCTCTC 59.113 54.545 0.00 0.00 0.00 3.20
2419 3553 3.435601 GGCCAATCTCTCTCTCTCTCTCT 60.436 52.174 0.00 0.00 0.00 3.10
2420 3554 3.817647 GCCAATCTCTCTCTCTCTCTCTC 59.182 52.174 0.00 0.00 0.00 3.20
2421 3555 4.445448 GCCAATCTCTCTCTCTCTCTCTCT 60.445 50.000 0.00 0.00 0.00 3.10
2422 3556 5.303971 CCAATCTCTCTCTCTCTCTCTCTC 58.696 50.000 0.00 0.00 0.00 3.20
2423 3557 5.071519 CCAATCTCTCTCTCTCTCTCTCTCT 59.928 48.000 0.00 0.00 0.00 3.10
2424 3558 6.222389 CAATCTCTCTCTCTCTCTCTCTCTC 58.778 48.000 0.00 0.00 0.00 3.20
2425 3559 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
2426 3560 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2427 3561 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2428 3562 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2429 3563 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2442 3576 4.892345 TCTCTCTCTCTCTCTCTCTCTCTG 59.108 50.000 0.00 0.00 0.00 3.35
2443 3577 3.963374 TCTCTCTCTCTCTCTCTCTCTGG 59.037 52.174 0.00 0.00 0.00 3.86
2449 3583 2.505407 CTCTCTCTCTCTCTGGAGGTGA 59.495 54.545 0.00 0.00 39.86 4.02
2461 3595 1.555075 TGGAGGTGAGATGTTGCTACC 59.445 52.381 0.00 0.00 0.00 3.18
2462 3596 1.471676 GGAGGTGAGATGTTGCTACCG 60.472 57.143 0.00 0.00 36.55 4.02
2464 3598 1.899814 AGGTGAGATGTTGCTACCGAA 59.100 47.619 0.00 0.00 36.55 4.30
2465 3599 2.000447 GGTGAGATGTTGCTACCGAAC 59.000 52.381 0.00 0.00 0.00 3.95
2466 3600 2.000447 GTGAGATGTTGCTACCGAACC 59.000 52.381 0.00 0.00 0.00 3.62
2469 3603 1.066143 AGATGTTGCTACCGAACCAGG 60.066 52.381 0.00 0.00 37.30 4.45
2470 3604 0.981183 ATGTTGCTACCGAACCAGGA 59.019 50.000 0.00 0.00 34.73 3.86
2471 3605 0.034337 TGTTGCTACCGAACCAGGAC 59.966 55.000 0.00 0.00 34.73 3.85
2472 3606 1.012486 GTTGCTACCGAACCAGGACG 61.012 60.000 0.00 0.00 34.73 4.79
2508 3643 1.787155 CCAAGTCGCTACATACGCATC 59.213 52.381 0.00 0.00 0.00 3.91
2516 3651 3.314553 GCTACATACGCATCGGTGTTAT 58.685 45.455 0.00 0.00 38.92 1.89
2570 3705 0.038159 GCCACTACTTCGCTGACTGT 60.038 55.000 0.00 0.00 0.00 3.55
2571 3706 1.201647 GCCACTACTTCGCTGACTGTA 59.798 52.381 0.00 0.00 0.00 2.74
2572 3707 2.352421 GCCACTACTTCGCTGACTGTAA 60.352 50.000 0.00 0.00 0.00 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.946768 CGAACATGGACAACAACCACT 59.053 47.619 0.00 0.00 40.36 4.00
1 2 1.599419 GCGAACATGGACAACAACCAC 60.599 52.381 0.00 0.00 40.36 4.16
2 3 0.665835 GCGAACATGGACAACAACCA 59.334 50.000 0.00 0.00 41.83 3.67
3 4 0.665835 TGCGAACATGGACAACAACC 59.334 50.000 0.00 0.00 0.00 3.77
4 5 2.223479 ACTTGCGAACATGGACAACAAC 60.223 45.455 0.00 0.00 0.00 3.32
5 6 2.020720 ACTTGCGAACATGGACAACAA 58.979 42.857 0.00 0.00 0.00 2.83
6 7 1.333308 CACTTGCGAACATGGACAACA 59.667 47.619 0.00 0.00 0.00 3.33
7 8 1.333619 ACACTTGCGAACATGGACAAC 59.666 47.619 0.00 0.00 0.00 3.32
8 9 1.674359 ACACTTGCGAACATGGACAA 58.326 45.000 0.00 0.00 0.00 3.18
9 10 1.333308 CAACACTTGCGAACATGGACA 59.667 47.619 0.00 0.00 0.00 4.02
10 11 1.334960 CCAACACTTGCGAACATGGAC 60.335 52.381 0.00 0.00 0.00 4.02
11 12 0.950836 CCAACACTTGCGAACATGGA 59.049 50.000 0.00 0.00 0.00 3.41
12 13 0.664166 GCCAACACTTGCGAACATGG 60.664 55.000 0.00 0.00 0.00 3.66
13 14 0.664166 GGCCAACACTTGCGAACATG 60.664 55.000 0.00 0.00 0.00 3.21
14 15 1.659794 GGCCAACACTTGCGAACAT 59.340 52.632 0.00 0.00 0.00 2.71
15 16 2.829206 CGGCCAACACTTGCGAACA 61.829 57.895 2.24 0.00 0.00 3.18
16 17 2.051345 CGGCCAACACTTGCGAAC 60.051 61.111 2.24 0.00 0.00 3.95
17 18 2.515057 ACGGCCAACACTTGCGAA 60.515 55.556 2.24 0.00 0.00 4.70
18 19 2.970324 GACGGCCAACACTTGCGA 60.970 61.111 2.24 0.00 0.00 5.10
19 20 4.025401 GGACGGCCAACACTTGCG 62.025 66.667 0.00 0.00 0.00 4.85
20 21 2.904866 TGGACGGCCAACACTTGC 60.905 61.111 8.12 0.00 42.49 4.01
29 30 2.359850 TCAGCAACATGGACGGCC 60.360 61.111 0.00 0.00 0.00 6.13
30 31 1.364626 CTCTCAGCAACATGGACGGC 61.365 60.000 0.00 0.00 0.00 5.68
31 32 1.364626 GCTCTCAGCAACATGGACGG 61.365 60.000 0.00 0.00 41.89 4.79
32 33 1.364626 GGCTCTCAGCAACATGGACG 61.365 60.000 0.00 0.00 44.75 4.79
33 34 0.035630 AGGCTCTCAGCAACATGGAC 60.036 55.000 0.00 0.00 44.75 4.02
34 35 0.035725 CAGGCTCTCAGCAACATGGA 60.036 55.000 0.00 0.00 44.75 3.41
35 36 1.654954 GCAGGCTCTCAGCAACATGG 61.655 60.000 0.00 0.00 44.75 3.66
36 37 0.677098 AGCAGGCTCTCAGCAACATG 60.677 55.000 0.00 0.00 44.75 3.21
37 38 0.677098 CAGCAGGCTCTCAGCAACAT 60.677 55.000 0.00 0.00 44.75 2.71
38 39 1.302271 CAGCAGGCTCTCAGCAACA 60.302 57.895 0.00 0.00 44.75 3.33
39 40 2.039405 CCAGCAGGCTCTCAGCAAC 61.039 63.158 0.00 0.00 44.75 4.17
40 41 2.350134 CCAGCAGGCTCTCAGCAA 59.650 61.111 0.00 0.00 44.75 3.91
71 72 2.523511 CGAATCAATTTGAAAGCGCTCG 59.476 45.455 12.06 0.50 0.00 5.03
72 73 2.848302 CCGAATCAATTTGAAAGCGCTC 59.152 45.455 12.06 0.00 0.00 5.03
94 95 7.987750 TTAATTAGGCACACAGTTAATCACA 57.012 32.000 0.00 0.00 0.00 3.58
104 105 7.264221 CCTGCAATTAATTAATTAGGCACACA 58.736 34.615 22.47 12.75 33.67 3.72
124 125 7.708752 CCGAATTAATTTTTAATTAGGCCTGCA 59.291 33.333 17.99 1.23 34.56 4.41
125 126 8.072238 CCGAATTAATTTTTAATTAGGCCTGC 57.928 34.615 17.99 0.00 34.56 4.85
141 142 8.023128 GCACATAGTTAATCATGCCGAATTAAT 58.977 33.333 1.88 0.00 0.00 1.40
142 143 7.359595 GCACATAGTTAATCATGCCGAATTAA 58.640 34.615 0.00 0.00 0.00 1.40
143 144 6.072728 GGCACATAGTTAATCATGCCGAATTA 60.073 38.462 0.00 0.00 42.88 1.40
148 149 3.542712 GGCACATAGTTAATCATGCCG 57.457 47.619 0.00 0.00 42.88 5.69
196 197 5.708736 AGGCCTTTAAATTATTTTGGGGG 57.291 39.130 0.00 0.00 0.00 5.40
223 224 9.250624 GACTCGCAGATAATTAAATAGACAGTT 57.749 33.333 0.00 0.00 33.89 3.16
224 225 8.634444 AGACTCGCAGATAATTAAATAGACAGT 58.366 33.333 0.00 0.00 33.89 3.55
241 242 6.400621 CGATAGACATCTAACTAGACTCGCAG 60.401 46.154 0.00 0.00 34.21 5.18
244 245 6.864685 AGACGATAGACATCTAACTAGACTCG 59.135 42.308 0.00 4.94 41.38 4.18
249 250 9.478768 TCTTACAGACGATAGACATCTAACTAG 57.521 37.037 0.00 0.00 41.38 2.57
257 258 6.716934 ATTGGTCTTACAGACGATAGACAT 57.283 37.500 0.00 0.00 45.96 3.06
265 266 6.780706 AACTGTTAATTGGTCTTACAGACG 57.219 37.500 0.00 0.00 45.96 4.18
267 268 7.996644 AGGAAAACTGTTAATTGGTCTTACAGA 59.003 33.333 0.00 0.00 0.00 3.41
307 308 8.414629 AGAAAGAGATTTTTCAATTAGGCAGT 57.585 30.769 1.88 0.00 39.08 4.40
319 320 8.190784 CCCGCATACAATTAGAAAGAGATTTTT 58.809 33.333 0.00 0.00 0.00 1.94
340 345 3.537580 CAGGTAGTTAATTAAGCCCGCA 58.462 45.455 0.00 0.00 0.00 5.69
342 347 2.876550 GGCAGGTAGTTAATTAAGCCCG 59.123 50.000 11.13 3.55 34.94 6.13
389 394 4.600801 CGCGCCGAATCAATTTAAAAATCG 60.601 41.667 0.00 0.00 0.00 3.34
391 396 4.170256 ACGCGCCGAATCAATTTAAAAAT 58.830 34.783 5.73 0.00 0.00 1.82
392 397 3.566523 ACGCGCCGAATCAATTTAAAAA 58.433 36.364 5.73 0.00 0.00 1.94
406 411 0.311790 TAGGGAATAGTTACGCGCCG 59.688 55.000 5.73 0.00 0.00 6.46
434 439 9.899661 TTAATTATGTGTGCAACTAGTTAGGAT 57.100 29.630 8.04 0.00 38.04 3.24
435 440 9.899661 ATTAATTATGTGTGCAACTAGTTAGGA 57.100 29.630 8.04 1.57 38.04 2.94
444 449 8.023128 AGTCTGACAATTAATTATGTGTGCAAC 58.977 33.333 10.88 0.00 37.35 4.17
447 452 7.751732 TCAGTCTGACAATTAATTATGTGTGC 58.248 34.615 10.88 1.26 0.00 4.57
466 471 4.878397 GCCACTAATGCAACTAATCAGTCT 59.122 41.667 0.00 0.00 32.29 3.24
471 476 5.818136 TCAAGCCACTAATGCAACTAATC 57.182 39.130 0.00 0.00 0.00 1.75
473 478 6.588719 AAATCAAGCCACTAATGCAACTAA 57.411 33.333 0.00 0.00 0.00 2.24
476 481 7.650834 TTAAAAATCAAGCCACTAATGCAAC 57.349 32.000 0.00 0.00 0.00 4.17
485 490 8.992073 ACTGAATCAATTTAAAAATCAAGCCAC 58.008 29.630 0.00 0.00 0.00 5.01
488 493 8.715088 AGCACTGAATCAATTTAAAAATCAAGC 58.285 29.630 0.00 1.41 0.00 4.01
532 537 6.015504 GTCGTTTAGCACACACATTAATGAG 58.984 40.000 22.16 16.28 0.00 2.90
533 538 5.388994 CGTCGTTTAGCACACACATTAATGA 60.389 40.000 22.16 0.00 0.00 2.57
536 541 3.184783 CCGTCGTTTAGCACACACATTAA 59.815 43.478 0.00 0.00 0.00 1.40
541 546 0.505655 GTCCGTCGTTTAGCACACAC 59.494 55.000 0.00 0.00 0.00 3.82
543 548 0.661187 TCGTCCGTCGTTTAGCACAC 60.661 55.000 0.00 0.00 40.80 3.82
548 553 2.159531 TGGTACATCGTCCGTCGTTTAG 60.160 50.000 0.00 0.00 40.80 1.85
549 554 1.809547 TGGTACATCGTCCGTCGTTTA 59.190 47.619 0.00 0.00 40.80 2.01
550 555 0.597568 TGGTACATCGTCCGTCGTTT 59.402 50.000 0.00 0.00 40.80 3.60
551 556 0.597568 TTGGTACATCGTCCGTCGTT 59.402 50.000 0.00 0.00 39.30 3.85
553 558 0.169672 AGTTGGTACATCGTCCGTCG 59.830 55.000 0.00 0.00 39.30 5.12
554 559 1.468736 GGAGTTGGTACATCGTCCGTC 60.469 57.143 0.00 0.00 39.30 4.79
555 560 0.529378 GGAGTTGGTACATCGTCCGT 59.471 55.000 0.00 0.00 39.30 4.69
556 561 0.179119 GGGAGTTGGTACATCGTCCG 60.179 60.000 0.00 0.00 39.30 4.79
557 562 0.177373 GGGGAGTTGGTACATCGTCC 59.823 60.000 0.00 0.00 39.30 4.79
558 563 1.192428 AGGGGAGTTGGTACATCGTC 58.808 55.000 0.00 0.00 39.30 4.20
560 565 2.781681 AAAGGGGAGTTGGTACATCG 57.218 50.000 0.00 0.00 39.30 3.84
561 566 6.896883 ACTATTAAAGGGGAGTTGGTACATC 58.103 40.000 0.00 0.00 39.30 3.06
562 567 6.903340 ACTATTAAAGGGGAGTTGGTACAT 57.097 37.500 0.00 0.00 39.30 2.29
566 571 7.578458 TCTTTACTATTAAAGGGGAGTTGGT 57.422 36.000 11.44 0.00 43.15 3.67
567 572 9.121658 GAATCTTTACTATTAAAGGGGAGTTGG 57.878 37.037 11.44 0.00 43.15 3.77
593 598 9.832445 ACCCACTGTACTAAACATAAATGATAG 57.168 33.333 0.00 2.28 37.50 2.08
620 625 9.377238 AGACTTATATTTATAAACGGAGGGAGT 57.623 33.333 0.00 0.00 0.00 3.85
647 652 4.675510 CGCAGGTAGTCCGTATCTAAAAA 58.324 43.478 0.00 0.00 39.05 1.94
648 653 4.297299 CGCAGGTAGTCCGTATCTAAAA 57.703 45.455 0.00 0.00 39.05 1.52
649 654 3.976793 CGCAGGTAGTCCGTATCTAAA 57.023 47.619 0.00 0.00 39.05 1.85
665 670 1.159285 TCACTCATTTTGCTCCGCAG 58.841 50.000 0.00 0.00 40.61 5.18
666 671 1.266718 GTTCACTCATTTTGCTCCGCA 59.733 47.619 0.00 0.00 36.47 5.69
667 672 1.401539 GGTTCACTCATTTTGCTCCGC 60.402 52.381 0.00 0.00 0.00 5.54
668 673 2.154462 AGGTTCACTCATTTTGCTCCG 58.846 47.619 0.00 0.00 0.00 4.63
669 674 4.072131 TGTAGGTTCACTCATTTTGCTCC 58.928 43.478 0.00 0.00 0.00 4.70
670 675 5.689383 TTGTAGGTTCACTCATTTTGCTC 57.311 39.130 0.00 0.00 0.00 4.26
671 676 6.006449 AGATTGTAGGTTCACTCATTTTGCT 58.994 36.000 0.00 0.00 0.00 3.91
672 677 6.259550 AGATTGTAGGTTCACTCATTTTGC 57.740 37.500 0.00 0.00 0.00 3.68
701 706 9.431887 GAACCACATACGGATGTATATAAATGT 57.568 33.333 14.23 0.00 44.82 2.71
702 707 9.430623 TGAACCACATACGGATGTATATAAATG 57.569 33.333 14.23 0.00 44.82 2.32
709 714 9.653287 CTAAATATGAACCACATACGGATGTAT 57.347 33.333 14.23 5.54 44.82 2.29
710 715 8.862085 TCTAAATATGAACCACATACGGATGTA 58.138 33.333 14.23 0.00 44.82 2.29
712 717 8.601845 TTCTAAATATGAACCACATACGGATG 57.398 34.615 5.94 5.94 43.12 3.51
713 718 9.052759 GTTTCTAAATATGAACCACATACGGAT 57.947 33.333 0.00 0.00 43.12 4.18
714 719 7.223193 CGTTTCTAAATATGAACCACATACGGA 59.777 37.037 0.00 0.00 43.12 4.69
715 720 7.342194 CGTTTCTAAATATGAACCACATACGG 58.658 38.462 0.00 0.00 43.12 4.02
716 721 7.223193 TCCGTTTCTAAATATGAACCACATACG 59.777 37.037 0.00 0.00 43.12 3.06
717 722 8.428186 TCCGTTTCTAAATATGAACCACATAC 57.572 34.615 0.00 0.00 43.12 2.39
718 723 9.104965 CTTCCGTTTCTAAATATGAACCACATA 57.895 33.333 0.00 0.00 44.21 2.29
719 724 7.067008 CCTTCCGTTTCTAAATATGAACCACAT 59.933 37.037 0.00 0.00 42.39 3.21
720 725 6.373216 CCTTCCGTTTCTAAATATGAACCACA 59.627 38.462 0.00 0.00 0.00 4.17
721 726 6.596497 TCCTTCCGTTTCTAAATATGAACCAC 59.404 38.462 0.00 0.00 0.00 4.16
722 727 6.596497 GTCCTTCCGTTTCTAAATATGAACCA 59.404 38.462 0.00 0.00 0.00 3.67
723 728 6.822170 AGTCCTTCCGTTTCTAAATATGAACC 59.178 38.462 0.00 0.00 0.00 3.62
724 729 7.845066 AGTCCTTCCGTTTCTAAATATGAAC 57.155 36.000 0.00 0.00 0.00 3.18
730 735 9.901172 ACATTAATAGTCCTTCCGTTTCTAAAT 57.099 29.630 0.00 0.00 0.00 1.40
731 736 9.374838 GACATTAATAGTCCTTCCGTTTCTAAA 57.625 33.333 6.72 0.00 0.00 1.85
732 737 8.533657 TGACATTAATAGTCCTTCCGTTTCTAA 58.466 33.333 12.51 0.00 35.15 2.10
733 738 8.070034 TGACATTAATAGTCCTTCCGTTTCTA 57.930 34.615 12.51 0.00 35.15 2.10
734 739 6.942976 TGACATTAATAGTCCTTCCGTTTCT 58.057 36.000 12.51 0.00 35.15 2.52
735 740 7.605410 TTGACATTAATAGTCCTTCCGTTTC 57.395 36.000 12.51 0.00 35.15 2.78
736 741 7.989416 TTTGACATTAATAGTCCTTCCGTTT 57.011 32.000 12.51 0.00 35.15 3.60
737 742 9.847224 ATATTTGACATTAATAGTCCTTCCGTT 57.153 29.630 12.51 0.00 35.15 4.44
774 779 9.997482 TGACAAGTTAGAAAAACAAATGAGTAC 57.003 29.630 0.00 0.00 0.00 2.73
776 781 9.736023 GATGACAAGTTAGAAAAACAAATGAGT 57.264 29.630 0.00 0.00 0.00 3.41
777 782 9.734620 TGATGACAAGTTAGAAAAACAAATGAG 57.265 29.630 0.00 0.00 0.00 2.90
784 789 9.382244 GTGTACATGATGACAAGTTAGAAAAAC 57.618 33.333 0.00 0.00 0.00 2.43
792 797 4.377021 ACACGTGTACATGATGACAAGTT 58.623 39.130 21.98 0.00 36.35 2.66
811 816 2.488937 TGATGCATCACATGGTCAACAC 59.511 45.455 25.42 0.00 39.84 3.32
825 830 5.363101 AGTAACGATGAAGATGTGATGCAT 58.637 37.500 0.00 0.00 41.24 3.96
913 918 8.196802 TGCACTACATGTAGTATGTTCATTTC 57.803 34.615 32.58 14.45 43.98 2.17
919 924 7.390440 ACAACATTGCACTACATGTAGTATGTT 59.610 33.333 34.53 34.53 44.87 2.71
1010 1023 2.627699 GCGAGGAGGAGAATGATCTTCT 59.372 50.000 7.02 7.02 44.70 2.85
1030 1043 0.031721 CGAATGGGTACTAGGACGGC 59.968 60.000 0.00 0.00 0.00 5.68
1031 1044 0.031721 GCGAATGGGTACTAGGACGG 59.968 60.000 0.00 0.00 0.00 4.79
1059 1078 4.467084 GGGCAATCCGTCCGAGCA 62.467 66.667 0.00 0.00 0.00 4.26
1084 1103 4.728102 CACCGCGCCCAGTAACGA 62.728 66.667 0.00 0.00 0.00 3.85
1284 1303 2.231529 GAGAGCGAGGAGTTATGGCTA 58.768 52.381 0.00 0.00 33.40 3.93
1290 1309 2.119655 GCCGGAGAGCGAGGAGTTA 61.120 63.158 5.05 0.00 0.00 2.24
1309 1328 2.496817 GTAGGCGTCCCTCTGCTG 59.503 66.667 0.00 0.00 41.75 4.41
1468 1487 1.300620 CCAGAGTCGGCGTCAACAA 60.301 57.895 6.85 0.00 0.00 2.83
1580 1599 1.361204 TGGACTGCCTCTCAATCCAA 58.639 50.000 0.00 0.00 46.96 3.53
1586 1605 0.833409 TTGCTCTGGACTGCCTCTCA 60.833 55.000 0.00 0.00 34.31 3.27
1587 1606 0.322975 TTTGCTCTGGACTGCCTCTC 59.677 55.000 0.00 0.00 34.31 3.20
1648 2573 2.620115 CCCCTGACAATACATCATGCAC 59.380 50.000 0.00 0.00 0.00 4.57
1699 2815 5.065218 CCGAAAATGAGGGAGTAACAGATTG 59.935 44.000 0.00 0.00 0.00 2.67
1709 2825 5.063880 CCCTATAAACCGAAAATGAGGGAG 58.936 45.833 0.00 0.00 44.48 4.30
1710 2826 4.687769 GCCCTATAAACCGAAAATGAGGGA 60.688 45.833 7.83 0.00 44.48 4.20
1711 2827 3.568430 GCCCTATAAACCGAAAATGAGGG 59.432 47.826 0.00 0.00 44.52 4.30
1712 2828 4.461198 AGCCCTATAAACCGAAAATGAGG 58.539 43.478 0.00 0.00 0.00 3.86
1713 2829 7.745620 ATAAGCCCTATAAACCGAAAATGAG 57.254 36.000 0.00 0.00 0.00 2.90
1714 2830 9.802039 AATATAAGCCCTATAAACCGAAAATGA 57.198 29.630 0.00 0.00 0.00 2.57
1763 2879 9.990868 ATGGGGAACAACTAAATTAAGACTTAT 57.009 29.630 0.00 0.00 0.00 1.73
1764 2880 9.457436 GATGGGGAACAACTAAATTAAGACTTA 57.543 33.333 0.00 0.00 0.00 2.24
1765 2881 7.947890 TGATGGGGAACAACTAAATTAAGACTT 59.052 33.333 0.00 0.00 0.00 3.01
1766 2882 7.466804 TGATGGGGAACAACTAAATTAAGACT 58.533 34.615 0.00 0.00 0.00 3.24
1767 2883 7.696992 TGATGGGGAACAACTAAATTAAGAC 57.303 36.000 0.00 0.00 0.00 3.01
1768 2884 8.713708 TTTGATGGGGAACAACTAAATTAAGA 57.286 30.769 0.00 0.00 0.00 2.10
1769 2885 9.369904 CATTTGATGGGGAACAACTAAATTAAG 57.630 33.333 0.00 0.00 0.00 1.85
1770 2886 8.875168 ACATTTGATGGGGAACAACTAAATTAA 58.125 29.630 0.00 0.00 33.60 1.40
1771 2887 8.429237 ACATTTGATGGGGAACAACTAAATTA 57.571 30.769 0.00 0.00 33.60 1.40
1772 2888 7.315066 ACATTTGATGGGGAACAACTAAATT 57.685 32.000 0.00 0.00 33.60 1.82
1773 2889 6.933514 ACATTTGATGGGGAACAACTAAAT 57.066 33.333 0.00 0.00 33.60 1.40
1774 2890 6.325028 TGAACATTTGATGGGGAACAACTAAA 59.675 34.615 0.00 0.00 33.60 1.85
1775 2891 5.835819 TGAACATTTGATGGGGAACAACTAA 59.164 36.000 0.00 0.00 33.60 2.24
1776 2892 5.389520 TGAACATTTGATGGGGAACAACTA 58.610 37.500 0.00 0.00 33.60 2.24
1777 2893 4.222336 TGAACATTTGATGGGGAACAACT 58.778 39.130 0.00 0.00 33.60 3.16
1778 2894 4.280677 TCTGAACATTTGATGGGGAACAAC 59.719 41.667 0.00 0.00 33.60 3.32
1779 2895 4.478203 TCTGAACATTTGATGGGGAACAA 58.522 39.130 0.00 0.00 33.60 2.83
1780 2896 4.111255 TCTGAACATTTGATGGGGAACA 57.889 40.909 0.00 0.00 33.60 3.18
1781 2897 5.665916 AATCTGAACATTTGATGGGGAAC 57.334 39.130 0.00 0.00 33.60 3.62
1782 2898 5.779260 TGAAATCTGAACATTTGATGGGGAA 59.221 36.000 0.00 0.00 33.60 3.97
1783 2899 5.331906 TGAAATCTGAACATTTGATGGGGA 58.668 37.500 0.00 0.00 33.60 4.81
1784 2900 5.664294 TGAAATCTGAACATTTGATGGGG 57.336 39.130 0.00 0.00 33.60 4.96
1785 2901 6.103997 CCTTGAAATCTGAACATTTGATGGG 58.896 40.000 0.00 0.00 33.60 4.00
1786 2902 6.588756 CACCTTGAAATCTGAACATTTGATGG 59.411 38.462 0.00 0.00 33.23 3.51
1787 2903 6.090358 GCACCTTGAAATCTGAACATTTGATG 59.910 38.462 0.00 0.00 0.00 3.07
1788 2904 6.161381 GCACCTTGAAATCTGAACATTTGAT 58.839 36.000 0.00 0.00 0.00 2.57
1789 2905 5.068855 TGCACCTTGAAATCTGAACATTTGA 59.931 36.000 0.00 0.00 0.00 2.69
1790 2906 5.291178 TGCACCTTGAAATCTGAACATTTG 58.709 37.500 0.00 0.00 0.00 2.32
1791 2907 5.534207 TGCACCTTGAAATCTGAACATTT 57.466 34.783 0.00 0.00 0.00 2.32
1792 2908 5.534207 TTGCACCTTGAAATCTGAACATT 57.466 34.783 0.00 0.00 0.00 2.71
1793 2909 5.733620 ATTGCACCTTGAAATCTGAACAT 57.266 34.783 0.00 0.00 0.00 2.71
1794 2910 6.647334 TTATTGCACCTTGAAATCTGAACA 57.353 33.333 0.00 0.00 0.00 3.18
1795 2911 7.814107 TGATTTATTGCACCTTGAAATCTGAAC 59.186 33.333 14.22 0.00 37.39 3.18
1796 2912 7.894708 TGATTTATTGCACCTTGAAATCTGAA 58.105 30.769 14.22 0.00 37.39 3.02
1797 2913 7.465353 TGATTTATTGCACCTTGAAATCTGA 57.535 32.000 14.22 0.00 37.39 3.27
1798 2914 8.600625 CAATGATTTATTGCACCTTGAAATCTG 58.399 33.333 14.22 6.34 39.71 2.90
1799 2915 8.712285 CAATGATTTATTGCACCTTGAAATCT 57.288 30.769 14.22 3.77 39.71 2.40
1843 2959 8.614346 GCATAAAATACATGCATTGGTCAATTT 58.386 29.630 0.00 0.00 46.47 1.82
1844 2960 8.145316 GCATAAAATACATGCATTGGTCAATT 57.855 30.769 0.00 0.00 46.47 2.32
1845 2961 7.718272 GCATAAAATACATGCATTGGTCAAT 57.282 32.000 0.00 0.00 46.47 2.57
1856 2972 4.623002 TGCATGCAGGCATAAAATACATG 58.377 39.130 24.07 0.00 39.25 3.21
1857 2973 4.940905 TGCATGCAGGCATAAAATACAT 57.059 36.364 24.07 0.00 39.25 2.29
1889 3005 9.809096 TCTTCAAAAATTGTGTTTACTAATGCA 57.191 25.926 0.00 0.00 0.00 3.96
1898 3014 9.163903 CGTTTGTTTTCTTCAAAAATTGTGTTT 57.836 25.926 0.00 0.00 36.71 2.83
1899 3015 7.322461 GCGTTTGTTTTCTTCAAAAATTGTGTT 59.678 29.630 0.00 0.00 36.71 3.32
1900 3016 6.794636 GCGTTTGTTTTCTTCAAAAATTGTGT 59.205 30.769 0.00 0.00 36.71 3.72
1901 3017 6.794158 TGCGTTTGTTTTCTTCAAAAATTGTG 59.206 30.769 0.00 0.00 36.71 3.33
1902 3018 6.892691 TGCGTTTGTTTTCTTCAAAAATTGT 58.107 28.000 0.00 0.00 36.71 2.71
1903 3019 7.691463 TGATGCGTTTGTTTTCTTCAAAAATTG 59.309 29.630 0.00 0.00 36.71 2.32
1904 3020 7.746929 TGATGCGTTTGTTTTCTTCAAAAATT 58.253 26.923 0.00 0.00 36.71 1.82
1905 3021 7.301068 TGATGCGTTTGTTTTCTTCAAAAAT 57.699 28.000 0.00 0.00 36.71 1.82
1906 3022 6.712241 TGATGCGTTTGTTTTCTTCAAAAA 57.288 29.167 0.00 0.00 36.71 1.94
1907 3023 6.712241 TTGATGCGTTTGTTTTCTTCAAAA 57.288 29.167 0.00 0.00 36.71 2.44
1908 3024 6.900568 ATTGATGCGTTTGTTTTCTTCAAA 57.099 29.167 0.00 0.00 33.28 2.69
1909 3025 6.533012 TCAATTGATGCGTTTGTTTTCTTCAA 59.467 30.769 3.38 0.00 0.00 2.69
1910 3026 6.038985 TCAATTGATGCGTTTGTTTTCTTCA 58.961 32.000 3.38 0.00 0.00 3.02
1911 3027 6.198966 ACTCAATTGATGCGTTTGTTTTCTTC 59.801 34.615 8.96 0.00 0.00 2.87
1912 3028 6.019640 CACTCAATTGATGCGTTTGTTTTCTT 60.020 34.615 8.96 0.00 0.00 2.52
1913 3029 5.459762 CACTCAATTGATGCGTTTGTTTTCT 59.540 36.000 8.96 0.00 0.00 2.52
1914 3030 5.458452 TCACTCAATTGATGCGTTTGTTTTC 59.542 36.000 8.96 0.00 0.00 2.29
1915 3031 5.347342 TCACTCAATTGATGCGTTTGTTTT 58.653 33.333 8.96 0.00 0.00 2.43
1916 3032 4.930963 TCACTCAATTGATGCGTTTGTTT 58.069 34.783 8.96 0.00 0.00 2.83
1917 3033 4.566545 TCACTCAATTGATGCGTTTGTT 57.433 36.364 8.96 0.00 0.00 2.83
1918 3034 4.771590 ATCACTCAATTGATGCGTTTGT 57.228 36.364 8.96 0.00 34.79 2.83
1919 3035 6.293618 CAAAATCACTCAATTGATGCGTTTG 58.706 36.000 8.96 15.56 36.31 2.93
1920 3036 5.107375 GCAAAATCACTCAATTGATGCGTTT 60.107 36.000 8.96 10.39 36.31 3.60
1921 3037 4.386652 GCAAAATCACTCAATTGATGCGTT 59.613 37.500 8.96 5.81 36.31 4.84
1922 3038 3.922240 GCAAAATCACTCAATTGATGCGT 59.078 39.130 8.96 0.39 36.31 5.24
1923 3039 3.921630 TGCAAAATCACTCAATTGATGCG 59.078 39.130 18.17 7.36 36.31 4.73
1924 3040 5.849357 TTGCAAAATCACTCAATTGATGC 57.151 34.783 17.11 17.11 36.31 3.91
1925 3041 7.416154 AGTTTGCAAAATCACTCAATTGATG 57.584 32.000 14.67 9.65 36.31 3.07
1926 3042 8.143193 TGTAGTTTGCAAAATCACTCAATTGAT 58.857 29.630 16.40 0.00 37.87 2.57
1927 3043 7.487484 TGTAGTTTGCAAAATCACTCAATTGA 58.513 30.769 16.40 8.12 0.00 2.57
1928 3044 7.697352 TGTAGTTTGCAAAATCACTCAATTG 57.303 32.000 16.40 0.00 0.00 2.32
1929 3045 8.715191 TTTGTAGTTTGCAAAATCACTCAATT 57.285 26.923 16.40 0.00 33.51 2.32
1930 3046 8.715191 TTTTGTAGTTTGCAAAATCACTCAAT 57.285 26.923 16.40 0.00 39.83 2.57
1931 3047 8.539770 TTTTTGTAGTTTGCAAAATCACTCAA 57.460 26.923 16.40 13.58 42.85 3.02
1932 3048 8.715191 ATTTTTGTAGTTTGCAAAATCACTCA 57.285 26.923 16.40 8.68 42.85 3.41
1933 3049 9.424659 CAATTTTTGTAGTTTGCAAAATCACTC 57.575 29.630 16.40 0.96 42.85 3.51
1934 3050 8.945057 ACAATTTTTGTAGTTTGCAAAATCACT 58.055 25.926 16.40 10.99 42.85 3.41
1935 3051 9.553418 AACAATTTTTGTAGTTTGCAAAATCAC 57.447 25.926 16.40 12.85 44.59 3.06
1940 3056 9.766277 GATGAAACAATTTTTGTAGTTTGCAAA 57.234 25.926 8.05 8.05 44.59 3.68
1941 3057 8.939929 TGATGAAACAATTTTTGTAGTTTGCAA 58.060 25.926 0.00 0.00 44.59 4.08
1942 3058 8.386606 GTGATGAAACAATTTTTGTAGTTTGCA 58.613 29.630 0.00 0.00 44.59 4.08
1943 3059 8.603181 AGTGATGAAACAATTTTTGTAGTTTGC 58.397 29.630 0.00 0.00 44.59 3.68
1945 3061 9.868277 TGAGTGATGAAACAATTTTTGTAGTTT 57.132 25.926 0.00 0.00 44.59 2.66
1946 3062 9.301153 GTGAGTGATGAAACAATTTTTGTAGTT 57.699 29.630 0.00 0.00 44.59 2.24
1947 3063 7.920682 GGTGAGTGATGAAACAATTTTTGTAGT 59.079 33.333 0.00 0.00 44.59 2.73
1948 3064 7.920151 TGGTGAGTGATGAAACAATTTTTGTAG 59.080 33.333 0.00 0.00 44.59 2.74
1949 3065 7.776107 TGGTGAGTGATGAAACAATTTTTGTA 58.224 30.769 0.00 0.00 44.59 2.41
1951 3067 7.654520 AGATGGTGAGTGATGAAACAATTTTTG 59.345 33.333 0.00 0.00 0.00 2.44
1952 3068 7.729116 AGATGGTGAGTGATGAAACAATTTTT 58.271 30.769 0.00 0.00 0.00 1.94
1953 3069 7.294017 AGATGGTGAGTGATGAAACAATTTT 57.706 32.000 0.00 0.00 0.00 1.82
1954 3070 6.906157 AGATGGTGAGTGATGAAACAATTT 57.094 33.333 0.00 0.00 0.00 1.82
1955 3071 8.585471 AATAGATGGTGAGTGATGAAACAATT 57.415 30.769 0.00 0.00 0.00 2.32
1956 3072 8.585471 AAATAGATGGTGAGTGATGAAACAAT 57.415 30.769 0.00 0.00 0.00 2.71
1957 3073 8.298854 CAAAATAGATGGTGAGTGATGAAACAA 58.701 33.333 0.00 0.00 0.00 2.83
1958 3074 7.094248 CCAAAATAGATGGTGAGTGATGAAACA 60.094 37.037 0.00 0.00 33.08 2.83
1959 3075 7.253422 CCAAAATAGATGGTGAGTGATGAAAC 58.747 38.462 0.00 0.00 33.08 2.78
1960 3076 7.395190 CCAAAATAGATGGTGAGTGATGAAA 57.605 36.000 0.00 0.00 33.08 2.69
1972 3088 6.780457 AATCTCACCAACCAAAATAGATGG 57.220 37.500 0.00 0.00 43.84 3.51
1973 3089 8.928733 CAAAAATCTCACCAACCAAAATAGATG 58.071 33.333 0.00 0.00 0.00 2.90
1974 3090 8.869109 TCAAAAATCTCACCAACCAAAATAGAT 58.131 29.630 0.00 0.00 0.00 1.98
1975 3091 8.243961 TCAAAAATCTCACCAACCAAAATAGA 57.756 30.769 0.00 0.00 0.00 1.98
1976 3092 8.885494 TTCAAAAATCTCACCAACCAAAATAG 57.115 30.769 0.00 0.00 0.00 1.73
1977 3093 9.844257 AATTCAAAAATCTCACCAACCAAAATA 57.156 25.926 0.00 0.00 0.00 1.40
1978 3094 8.623030 CAATTCAAAAATCTCACCAACCAAAAT 58.377 29.630 0.00 0.00 0.00 1.82
1979 3095 7.826252 TCAATTCAAAAATCTCACCAACCAAAA 59.174 29.630 0.00 0.00 0.00 2.44
1980 3096 7.334090 TCAATTCAAAAATCTCACCAACCAAA 58.666 30.769 0.00 0.00 0.00 3.28
1981 3097 6.882656 TCAATTCAAAAATCTCACCAACCAA 58.117 32.000 0.00 0.00 0.00 3.67
1982 3098 6.477053 TCAATTCAAAAATCTCACCAACCA 57.523 33.333 0.00 0.00 0.00 3.67
1983 3099 5.406477 GCTCAATTCAAAAATCTCACCAACC 59.594 40.000 0.00 0.00 0.00 3.77
1984 3100 5.406477 GGCTCAATTCAAAAATCTCACCAAC 59.594 40.000 0.00 0.00 0.00 3.77
1985 3101 5.511202 GGGCTCAATTCAAAAATCTCACCAA 60.511 40.000 0.00 0.00 0.00 3.67
1986 3102 4.021192 GGGCTCAATTCAAAAATCTCACCA 60.021 41.667 0.00 0.00 0.00 4.17
1987 3103 4.221482 AGGGCTCAATTCAAAAATCTCACC 59.779 41.667 0.00 0.00 0.00 4.02
1988 3104 5.397142 AGGGCTCAATTCAAAAATCTCAC 57.603 39.130 0.00 0.00 0.00 3.51
1989 3105 8.821686 TTATAGGGCTCAATTCAAAAATCTCA 57.178 30.769 0.00 0.00 0.00 3.27
1990 3106 9.521503 GTTTATAGGGCTCAATTCAAAAATCTC 57.478 33.333 0.00 0.00 0.00 2.75
1991 3107 8.478066 GGTTTATAGGGCTCAATTCAAAAATCT 58.522 33.333 0.00 0.00 0.00 2.40
1992 3108 7.435192 CGGTTTATAGGGCTCAATTCAAAAATC 59.565 37.037 0.00 0.00 0.00 2.17
1993 3109 7.123547 TCGGTTTATAGGGCTCAATTCAAAAAT 59.876 33.333 0.00 0.00 0.00 1.82
1994 3110 6.434652 TCGGTTTATAGGGCTCAATTCAAAAA 59.565 34.615 0.00 0.00 0.00 1.94
1995 3111 5.946972 TCGGTTTATAGGGCTCAATTCAAAA 59.053 36.000 0.00 0.00 0.00 2.44
1996 3112 5.502079 TCGGTTTATAGGGCTCAATTCAAA 58.498 37.500 0.00 0.00 0.00 2.69
1997 3113 5.105567 TCGGTTTATAGGGCTCAATTCAA 57.894 39.130 0.00 0.00 0.00 2.69
1998 3114 4.764050 TCGGTTTATAGGGCTCAATTCA 57.236 40.909 0.00 0.00 0.00 2.57
1999 3115 6.445357 TTTTCGGTTTATAGGGCTCAATTC 57.555 37.500 0.00 0.00 0.00 2.17
2000 3116 5.359860 CCTTTTCGGTTTATAGGGCTCAATT 59.640 40.000 0.00 0.00 0.00 2.32
2001 3117 4.887655 CCTTTTCGGTTTATAGGGCTCAAT 59.112 41.667 0.00 0.00 0.00 2.57
2002 3118 4.019141 TCCTTTTCGGTTTATAGGGCTCAA 60.019 41.667 0.00 0.00 0.00 3.02
2003 3119 3.520317 TCCTTTTCGGTTTATAGGGCTCA 59.480 43.478 0.00 0.00 0.00 4.26
2004 3120 4.146745 TCCTTTTCGGTTTATAGGGCTC 57.853 45.455 0.00 0.00 0.00 4.70
2005 3121 4.079958 ACATCCTTTTCGGTTTATAGGGCT 60.080 41.667 0.00 0.00 0.00 5.19
2006 3122 4.204799 ACATCCTTTTCGGTTTATAGGGC 58.795 43.478 0.00 0.00 0.00 5.19
2007 3123 6.589135 ACTACATCCTTTTCGGTTTATAGGG 58.411 40.000 0.00 0.00 0.00 3.53
2008 3124 9.257651 CTTACTACATCCTTTTCGGTTTATAGG 57.742 37.037 0.00 0.00 0.00 2.57
2009 3125 9.813446 ACTTACTACATCCTTTTCGGTTTATAG 57.187 33.333 0.00 0.00 0.00 1.31
2013 3129 9.511272 AATAACTTACTACATCCTTTTCGGTTT 57.489 29.630 0.00 0.00 0.00 3.27
2050 3166 4.101585 TGACATATCAGGAGCCTCGAATTT 59.898 41.667 0.00 0.00 0.00 1.82
2176 3295 4.662278 CCCAATAGGAAACCAAACTGAGA 58.338 43.478 0.00 0.00 38.24 3.27
2369 3503 4.408821 CCAGCGGTAGCCCAGCAA 62.409 66.667 0.00 0.00 46.67 3.91
2415 3549 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2416 3550 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2417 3551 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2418 3552 5.009911 CAGAGAGAGAGAGAGAGAGAGAGAG 59.990 52.000 0.00 0.00 0.00 3.20
2419 3553 4.892345 CAGAGAGAGAGAGAGAGAGAGAGA 59.108 50.000 0.00 0.00 0.00 3.10
2420 3554 4.039004 CCAGAGAGAGAGAGAGAGAGAGAG 59.961 54.167 0.00 0.00 0.00 3.20
2421 3555 3.963374 CCAGAGAGAGAGAGAGAGAGAGA 59.037 52.174 0.00 0.00 0.00 3.10
2422 3556 3.963374 TCCAGAGAGAGAGAGAGAGAGAG 59.037 52.174 0.00 0.00 0.00 3.20
2423 3557 3.963374 CTCCAGAGAGAGAGAGAGAGAGA 59.037 52.174 0.00 0.00 43.39 3.10
2424 3558 3.070734 CCTCCAGAGAGAGAGAGAGAGAG 59.929 56.522 0.00 0.00 43.39 3.20
2425 3559 3.041211 CCTCCAGAGAGAGAGAGAGAGA 58.959 54.545 0.00 0.00 43.39 3.10
2426 3560 2.774234 ACCTCCAGAGAGAGAGAGAGAG 59.226 54.545 0.00 0.00 43.39 3.20
2427 3561 2.505407 CACCTCCAGAGAGAGAGAGAGA 59.495 54.545 0.00 0.00 43.39 3.10
2428 3562 2.505407 TCACCTCCAGAGAGAGAGAGAG 59.495 54.545 0.00 0.00 43.39 3.20
2429 3563 2.505407 CTCACCTCCAGAGAGAGAGAGA 59.495 54.545 9.98 0.00 43.39 3.10
2442 3576 1.471676 CGGTAGCAACATCTCACCTCC 60.472 57.143 0.00 0.00 0.00 4.30
2443 3577 1.476891 TCGGTAGCAACATCTCACCTC 59.523 52.381 0.00 0.00 0.00 3.85
2449 3583 1.066143 CCTGGTTCGGTAGCAACATCT 60.066 52.381 8.70 0.00 33.04 2.90
2523 3658 3.866582 GGCTAGCCTCGGGTGCAT 61.867 66.667 27.17 0.00 0.00 3.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.