Multiple sequence alignment - TraesCS7D01G470800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G470800 chr7D 100.000 2500 0 0 3257 5756 584215260 584212761 0.000000e+00 4617.0
1 TraesCS7D01G470800 chr7D 100.000 1797 0 0 1 1797 584218516 584216720 0.000000e+00 3319.0
2 TraesCS7D01G470800 chr7D 90.154 1493 104 11 1 1482 584276351 584277811 0.000000e+00 1903.0
3 TraesCS7D01G470800 chr7D 89.350 1493 128 11 7 1485 584604488 584603013 0.000000e+00 1847.0
4 TraesCS7D01G470800 chr7D 100.000 759 0 0 2151 2909 584216366 584215608 0.000000e+00 1402.0
5 TraesCS7D01G470800 chr7D 91.411 978 58 12 514 1485 582680121 582679164 0.000000e+00 1317.0
6 TraesCS7D01G470800 chr7D 88.437 787 85 3 4433 5214 586115438 586116223 0.000000e+00 944.0
7 TraesCS7D01G470800 chr7D 88.041 786 88 3 4433 5213 586109213 586109997 0.000000e+00 926.0
8 TraesCS7D01G470800 chr7D 84.472 966 84 46 851 1797 586105929 586106847 0.000000e+00 893.0
9 TraesCS7D01G470800 chr7D 84.369 966 86 47 851 1797 586112661 586113580 0.000000e+00 887.0
10 TraesCS7D01G470800 chr7D 84.369 966 86 45 851 1797 586118886 586119805 0.000000e+00 887.0
11 TraesCS7D01G470800 chr7D 87.324 781 89 7 4433 5208 586121712 586122487 0.000000e+00 885.0
12 TraesCS7D01G470800 chr7D 88.661 732 74 4 4869 5599 584589850 584589127 0.000000e+00 883.0
13 TraesCS7D01G470800 chr7D 84.203 728 55 32 1091 1797 586023761 586024449 0.000000e+00 652.0
14 TraesCS7D01G470800 chr7D 88.007 542 51 8 4251 4791 583032677 583032149 3.790000e-176 628.0
15 TraesCS7D01G470800 chr7D 79.733 449 72 10 3261 3705 456553317 456553750 2.010000e-79 307.0
16 TraesCS7D01G470800 chr7D 90.783 217 15 4 1585 1797 583034241 583034026 9.440000e-73 285.0
17 TraesCS7D01G470800 chr7D 90.566 212 17 2 1589 1797 582679038 582678827 1.580000e-70 278.0
18 TraesCS7D01G470800 chr7D 89.862 217 16 5 1586 1797 584277936 584278151 2.040000e-69 274.0
19 TraesCS7D01G470800 chr7D 90.094 212 18 2 1589 1797 582602269 582602058 7.350000e-69 272.0
20 TraesCS7D01G470800 chr7D 89.231 65 7 0 4173 4237 536647248 536647312 1.330000e-11 82.4
21 TraesCS7D01G470800 chr7B 93.329 1589 67 4 4169 5755 722088043 722086492 0.000000e+00 2311.0
22 TraesCS7D01G470800 chr7B 90.995 1277 104 6 7 1273 652402744 652401469 0.000000e+00 1711.0
23 TraesCS7D01G470800 chr7B 90.603 1277 110 5 7 1273 652440980 652439704 0.000000e+00 1685.0
24 TraesCS7D01G470800 chr7B 88.986 1253 98 15 35 1273 651874116 651872890 0.000000e+00 1513.0
25 TraesCS7D01G470800 chr7B 88.528 1046 108 6 4252 5295 656303936 656304971 0.000000e+00 1256.0
26 TraesCS7D01G470800 chr7B 90.077 907 77 9 7 907 708677333 708676434 0.000000e+00 1164.0
27 TraesCS7D01G470800 chr7B 88.042 945 94 11 4251 5188 651872400 651871468 0.000000e+00 1101.0
28 TraesCS7D01G470800 chr7B 89.976 848 77 4 1 844 656300383 656301226 0.000000e+00 1088.0
29 TraesCS7D01G470800 chr7B 90.168 834 74 3 448 1273 652975266 652974433 0.000000e+00 1079.0
30 TraesCS7D01G470800 chr7B 90.743 767 53 7 721 1485 652175107 652174357 0.000000e+00 1007.0
31 TraesCS7D01G470800 chr7B 86.885 732 87 4 4869 5599 652970818 652970095 0.000000e+00 811.0
32 TraesCS7D01G470800 chr7B 82.801 971 85 41 851 1797 656301383 656302295 0.000000e+00 793.0
33 TraesCS7D01G470800 chr7B 85.464 798 67 17 4974 5755 708671866 708671102 0.000000e+00 785.0
34 TraesCS7D01G470800 chr7B 88.018 651 51 13 851 1498 722089967 722089341 0.000000e+00 745.0
35 TraesCS7D01G470800 chr7B 79.832 476 60 20 2452 2909 372437131 372436674 1.200000e-81 315.0
36 TraesCS7D01G470800 chr7B 91.469 211 6 5 1588 1797 722089254 722089055 4.390000e-71 279.0
37 TraesCS7D01G470800 chr7B 89.671 213 17 4 1589 1797 652401143 652400932 3.420000e-67 267.0
38 TraesCS7D01G470800 chr7A 90.380 1237 101 9 1 1223 675870501 675871733 0.000000e+00 1609.0
39 TraesCS7D01G470800 chr7A 89.142 1271 132 5 4273 5540 677446646 677447913 0.000000e+00 1578.0
40 TraesCS7D01G470800 chr7A 88.764 1068 111 7 4273 5338 677616604 677617664 0.000000e+00 1299.0
41 TraesCS7D01G470800 chr7A 90.432 972 71 8 514 1481 674683469 674682516 0.000000e+00 1260.0
42 TraesCS7D01G470800 chr7A 90.260 924 73 12 1 918 708496295 708495383 0.000000e+00 1192.0
43 TraesCS7D01G470800 chr7A 87.850 963 108 5 4251 5208 676995108 676996066 0.000000e+00 1122.0
44 TraesCS7D01G470800 chr7A 88.489 695 72 5 4251 4942 675875374 675876063 0.000000e+00 833.0
45 TraesCS7D01G470800 chr7A 88.489 695 72 5 4251 4942 675913249 675913938 0.000000e+00 833.0
46 TraesCS7D01G470800 chr7A 90.727 550 31 6 2159 2689 586202639 586202091 0.000000e+00 715.0
47 TraesCS7D01G470800 chr7A 90.000 550 55 0 5206 5755 677001274 677001823 0.000000e+00 712.0
48 TraesCS7D01G470800 chr7A 86.775 552 60 10 5214 5752 675876219 675876770 2.290000e-168 603.0
49 TraesCS7D01G470800 chr7A 86.335 322 23 10 1182 1503 676992830 676993130 1.200000e-86 331.0
50 TraesCS7D01G470800 chr7A 89.671 213 16 4 1589 1797 674682391 674682181 3.420000e-67 267.0
51 TraesCS7D01G470800 chr7A 92.537 67 5 0 4172 4238 695102025 695101959 4.750000e-16 97.1
52 TraesCS7D01G470800 chr7A 89.041 73 7 1 4169 4240 370680326 370680398 7.940000e-14 89.8
53 TraesCS7D01G470800 chr7A 88.889 63 7 0 4178 4240 469500648 469500586 1.720000e-10 78.7
54 TraesCS7D01G470800 chr1A 95.756 919 35 4 3258 4173 331927198 331926281 0.000000e+00 1478.0
55 TraesCS7D01G470800 chr1A 96.126 413 14 1 2499 2909 563325556 563325968 0.000000e+00 673.0
56 TraesCS7D01G470800 chr1A 80.086 467 57 20 2452 2900 45832922 45833370 1.200000e-81 315.0
57 TraesCS7D01G470800 chr1A 88.235 119 9 3 2638 2751 563325556 563325674 2.800000e-28 137.0
58 TraesCS7D01G470800 chr1A 96.226 53 2 0 2159 2211 563325128 563325180 2.860000e-13 87.9
59 TraesCS7D01G470800 chr6B 94.766 917 44 4 3258 4173 516340139 516339226 0.000000e+00 1424.0
60 TraesCS7D01G470800 chr5B 95.185 623 26 3 3545 4164 532103030 532103651 0.000000e+00 981.0
61 TraesCS7D01G470800 chr2D 86.168 788 72 11 4974 5755 107820839 107820083 0.000000e+00 817.0
62 TraesCS7D01G470800 chr2D 87.661 697 76 7 4251 4942 107821529 107820838 0.000000e+00 802.0
63 TraesCS7D01G470800 chrUn 86.775 552 60 10 5214 5752 308863839 308864390 2.290000e-168 603.0
64 TraesCS7D01G470800 chr1B 83.991 456 49 11 2466 2900 516917236 516917688 3.210000e-112 416.0
65 TraesCS7D01G470800 chr1B 87.662 308 30 5 2452 2752 516917150 516917456 9.180000e-93 351.0
66 TraesCS7D01G470800 chr1B 87.013 308 32 5 2452 2752 516891608 516891914 1.990000e-89 340.0
67 TraesCS7D01G470800 chr1B 79.832 476 60 20 2452 2909 502315961 502315504 1.200000e-81 315.0
68 TraesCS7D01G470800 chr1B 87.405 262 23 5 2466 2720 516891694 516891952 5.640000e-75 292.0
69 TraesCS7D01G470800 chr2A 85.551 263 27 6 2542 2794 761057516 761057777 1.230000e-66 265.0
70 TraesCS7D01G470800 chr4A 91.781 73 5 1 4169 4240 60661339 60661411 3.670000e-17 100.0
71 TraesCS7D01G470800 chr3B 91.304 69 6 0 4172 4240 497630380 497630448 1.710000e-15 95.3
72 TraesCS7D01G470800 chr6A 89.552 67 5 2 4172 4237 105126292 105126357 3.700000e-12 84.2
73 TraesCS7D01G470800 chr5A 84.000 75 9 3 4172 4245 332295088 332295016 1.030000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G470800 chr7D 584212761 584218516 5755 True 3112.666667 4617 100.000000 1 5756 3 chr7D.!!$R6 5755
1 TraesCS7D01G470800 chr7D 584603013 584604488 1475 True 1847.000000 1847 89.350000 7 1485 1 chr7D.!!$R3 1478
2 TraesCS7D01G470800 chr7D 584276351 584278151 1800 False 1088.500000 1903 90.008000 1 1797 2 chr7D.!!$F4 1796
3 TraesCS7D01G470800 chr7D 586105929 586122487 16558 False 903.666667 944 86.168667 851 5214 6 chr7D.!!$F5 4363
4 TraesCS7D01G470800 chr7D 584589127 584589850 723 True 883.000000 883 88.661000 4869 5599 1 chr7D.!!$R2 730
5 TraesCS7D01G470800 chr7D 582678827 582680121 1294 True 797.500000 1317 90.988500 514 1797 2 chr7D.!!$R4 1283
6 TraesCS7D01G470800 chr7D 586023761 586024449 688 False 652.000000 652 84.203000 1091 1797 1 chr7D.!!$F3 706
7 TraesCS7D01G470800 chr7D 583032149 583034241 2092 True 456.500000 628 89.395000 1585 4791 2 chr7D.!!$R5 3206
8 TraesCS7D01G470800 chr7B 652439704 652440980 1276 True 1685.000000 1685 90.603000 7 1273 1 chr7B.!!$R3 1266
9 TraesCS7D01G470800 chr7B 651871468 651874116 2648 True 1307.000000 1513 88.514000 35 5188 2 chr7B.!!$R6 5153
10 TraesCS7D01G470800 chr7B 708676434 708677333 899 True 1164.000000 1164 90.077000 7 907 1 chr7B.!!$R5 900
11 TraesCS7D01G470800 chr7B 722086492 722089967 3475 True 1111.666667 2311 90.938667 851 5755 3 chr7B.!!$R9 4904
12 TraesCS7D01G470800 chr7B 656300383 656304971 4588 False 1045.666667 1256 87.101667 1 5295 3 chr7B.!!$F1 5294
13 TraesCS7D01G470800 chr7B 652174357 652175107 750 True 1007.000000 1007 90.743000 721 1485 1 chr7B.!!$R2 764
14 TraesCS7D01G470800 chr7B 652400932 652402744 1812 True 989.000000 1711 90.333000 7 1797 2 chr7B.!!$R7 1790
15 TraesCS7D01G470800 chr7B 652970095 652975266 5171 True 945.000000 1079 88.526500 448 5599 2 chr7B.!!$R8 5151
16 TraesCS7D01G470800 chr7B 708671102 708671866 764 True 785.000000 785 85.464000 4974 5755 1 chr7B.!!$R4 781
17 TraesCS7D01G470800 chr7A 677446646 677447913 1267 False 1578.000000 1578 89.142000 4273 5540 1 chr7A.!!$F4 1267
18 TraesCS7D01G470800 chr7A 677616604 677617664 1060 False 1299.000000 1299 88.764000 4273 5338 1 chr7A.!!$F5 1065
19 TraesCS7D01G470800 chr7A 708495383 708496295 912 True 1192.000000 1192 90.260000 1 918 1 chr7A.!!$R4 917
20 TraesCS7D01G470800 chr7A 675870501 675876770 6269 False 1015.000000 1609 88.548000 1 5752 3 chr7A.!!$F6 5751
21 TraesCS7D01G470800 chr7A 675913249 675913938 689 False 833.000000 833 88.489000 4251 4942 1 chr7A.!!$F2 691
22 TraesCS7D01G470800 chr7A 674682181 674683469 1288 True 763.500000 1260 90.051500 514 1797 2 chr7A.!!$R5 1283
23 TraesCS7D01G470800 chr7A 676992830 676996066 3236 False 726.500000 1122 87.092500 1182 5208 2 chr7A.!!$F7 4026
24 TraesCS7D01G470800 chr7A 586202091 586202639 548 True 715.000000 715 90.727000 2159 2689 1 chr7A.!!$R2 530
25 TraesCS7D01G470800 chr7A 677001274 677001823 549 False 712.000000 712 90.000000 5206 5755 1 chr7A.!!$F3 549
26 TraesCS7D01G470800 chr1A 331926281 331927198 917 True 1478.000000 1478 95.756000 3258 4173 1 chr1A.!!$R1 915
27 TraesCS7D01G470800 chr1A 563325128 563325968 840 False 299.300000 673 93.529000 2159 2909 3 chr1A.!!$F2 750
28 TraesCS7D01G470800 chr6B 516339226 516340139 913 True 1424.000000 1424 94.766000 3258 4173 1 chr6B.!!$R1 915
29 TraesCS7D01G470800 chr5B 532103030 532103651 621 False 981.000000 981 95.185000 3545 4164 1 chr5B.!!$F1 619
30 TraesCS7D01G470800 chr2D 107820083 107821529 1446 True 809.500000 817 86.914500 4251 5755 2 chr2D.!!$R1 1504
31 TraesCS7D01G470800 chrUn 308863839 308864390 551 False 603.000000 603 86.775000 5214 5752 1 chrUn.!!$F1 538
32 TraesCS7D01G470800 chr1B 516917150 516917688 538 False 383.500000 416 85.826500 2452 2900 2 chr1B.!!$F2 448

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
295 311 0.447801 GCCGTGCTCACCAAATACTG 59.552 55.0 0.00 0.0 0.0 2.74 F
1126 7031 0.519519 CCGTATCTCTCCTAGCAGCG 59.480 60.0 0.00 0.0 0.0 5.18 F
1286 7201 0.814010 GTCCATTAGCGGCGTCCATT 60.814 55.0 9.37 0.0 0.0 3.16 F
2328 9708 0.886490 GACCTGCCCGCTAATCATGG 60.886 60.0 0.00 0.0 0.0 3.66 F
3734 12244 0.100682 CACTACACATCGCTACGCCT 59.899 55.0 0.00 0.0 0.0 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2287 9667 0.108585 ACCAACGCACAAGACTCCAT 59.891 50.000 0.00 0.0 0.00 3.41 R
2800 10547 1.227943 TGCTTGCGCCAGTTTCTCT 60.228 52.632 10.52 0.0 34.43 3.10 R
2832 10580 1.476891 CGCTCCTGCTCTAAGTAACCA 59.523 52.381 0.00 0.0 36.97 3.67 R
4036 13283 0.108329 AACTTCCGTCCCGCATACTG 60.108 55.000 0.00 0.0 0.00 2.74 R
5199 15256 0.792640 GCGTGATGGATTATGCCTCG 59.207 55.000 0.00 0.0 0.00 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
295 311 0.447801 GCCGTGCTCACCAAATACTG 59.552 55.000 0.00 0.00 0.00 2.74
357 373 6.061022 TGGTCAGCTAATCATTAGTCCAAA 57.939 37.500 6.29 0.00 35.66 3.28
363 379 8.704668 TCAGCTAATCATTAGTCCAAACTCATA 58.295 33.333 6.29 0.00 36.92 2.15
380 396 3.885297 CTCATACAAACAGGGCCTTATGG 59.115 47.826 17.84 4.91 0.00 2.74
400 429 9.231297 CTTATGGACAAGAAATAGAAAACTCCA 57.769 33.333 0.00 0.00 0.00 3.86
403 432 7.230747 TGGACAAGAAATAGAAAACTCCATGA 58.769 34.615 0.00 0.00 0.00 3.07
404 433 7.391554 TGGACAAGAAATAGAAAACTCCATGAG 59.608 37.037 0.00 0.00 35.52 2.90
405 434 7.607991 GGACAAGAAATAGAAAACTCCATGAGA 59.392 37.037 0.00 0.00 33.32 3.27
407 436 8.378565 ACAAGAAATAGAAAACTCCATGAGAGA 58.621 33.333 15.51 0.00 46.50 3.10
409 438 9.447157 AAGAAATAGAAAACTCCATGAGAGAAG 57.553 33.333 15.51 0.00 46.50 2.85
410 439 8.820831 AGAAATAGAAAACTCCATGAGAGAAGA 58.179 33.333 15.51 0.00 46.50 2.87
411 440 9.442047 GAAATAGAAAACTCCATGAGAGAAGAA 57.558 33.333 15.51 0.67 46.50 2.52
413 442 9.447157 AATAGAAAACTCCATGAGAGAAGAAAG 57.553 33.333 15.51 0.00 46.50 2.62
414 443 5.704978 AGAAAACTCCATGAGAGAAGAAAGC 59.295 40.000 15.51 0.00 46.50 3.51
415 444 4.906747 AACTCCATGAGAGAAGAAAGCT 57.093 40.909 15.51 0.00 46.50 3.74
482 517 3.007723 TGAGAGCTCAGTTGCAAAGATCT 59.992 43.478 17.77 15.37 38.41 2.75
724 767 3.394274 TCCTTCAGTCCACATCCAAAGAA 59.606 43.478 0.00 0.00 0.00 2.52
776 819 5.821516 AACGTGGTTGATGTGAAACTTTA 57.178 34.783 0.00 0.00 38.04 1.85
822 866 5.355910 ACAAACATGTTTACGGACTCTTGTT 59.644 36.000 22.87 0.00 0.00 2.83
826 870 5.236478 ACATGTTTACGGACTCTTGTTCTTG 59.764 40.000 0.00 0.00 0.00 3.02
890 6773 7.593875 TGTTCATGCTTTTATTTTATGGTGC 57.406 32.000 0.00 0.00 0.00 5.01
893 6776 8.502387 GTTCATGCTTTTATTTTATGGTGCAAA 58.498 29.630 0.00 0.00 32.88 3.68
982 6881 8.393395 TCATTCTTTTCTTCAACGTTCAAAAG 57.607 30.769 17.38 17.38 36.02 2.27
1025 6930 4.184629 GCGCCTTCAGAAAAGAATCTCTA 58.815 43.478 0.00 0.00 0.00 2.43
1039 6944 1.598882 TCTCTATGCGATCGTGCTCT 58.401 50.000 17.81 0.00 35.36 4.09
1126 7031 0.519519 CCGTATCTCTCCTAGCAGCG 59.480 60.000 0.00 0.00 0.00 5.18
1275 7190 3.706140 GCAGTCGGCGTCCATTAG 58.294 61.111 6.85 0.00 0.00 1.73
1276 7191 2.526120 GCAGTCGGCGTCCATTAGC 61.526 63.158 6.85 0.00 0.00 3.09
1277 7192 2.104331 AGTCGGCGTCCATTAGCG 59.896 61.111 6.85 0.00 0.00 4.26
1278 7193 2.960129 GTCGGCGTCCATTAGCGG 60.960 66.667 6.85 0.00 35.42 5.52
1282 7197 3.627218 GCGTCCATTAGCGGCGTC 61.627 66.667 9.37 0.13 0.00 5.19
1283 7198 2.960129 CGTCCATTAGCGGCGTCC 60.960 66.667 9.37 0.00 0.00 4.79
1284 7199 2.185867 GTCCATTAGCGGCGTCCA 59.814 61.111 9.37 0.00 0.00 4.02
1285 7200 1.227556 GTCCATTAGCGGCGTCCAT 60.228 57.895 9.37 0.00 0.00 3.41
1286 7201 0.814010 GTCCATTAGCGGCGTCCATT 60.814 55.000 9.37 0.00 0.00 3.16
1298 7213 4.558095 GCGGCGTCCATTAGATACTCTTTA 60.558 45.833 9.37 0.00 0.00 1.85
1361 7280 1.265236 CCAATGGCTAGGGTTGCAAA 58.735 50.000 0.00 0.00 0.00 3.68
1362 7281 1.832998 CCAATGGCTAGGGTTGCAAAT 59.167 47.619 0.00 0.00 0.00 2.32
1423 7342 4.667668 GCTTGTGACGACTTCAAATGCTAG 60.668 45.833 3.50 0.00 38.87 3.42
1529 7478 3.793819 GGTTGTAACCCCTCCTGTTTA 57.206 47.619 2.28 0.00 43.43 2.01
1533 7482 6.247676 GGTTGTAACCCCTCCTGTTTATTAA 58.752 40.000 2.28 0.00 43.43 1.40
1534 7483 6.720748 GGTTGTAACCCCTCCTGTTTATTAAA 59.279 38.462 2.28 0.00 43.43 1.52
1535 7484 7.233144 GGTTGTAACCCCTCCTGTTTATTAAAA 59.767 37.037 2.28 0.00 43.43 1.52
1575 7692 7.881912 TTATTACATAATAGCCAGGAAGGGA 57.118 36.000 0.00 0.00 38.09 4.20
1578 7695 7.881912 TTACATAATAGCCAGGAAGGGATAA 57.118 36.000 0.00 0.00 38.09 1.75
1579 7696 6.977244 ACATAATAGCCAGGAAGGGATAAT 57.023 37.500 0.00 0.00 38.09 1.28
1580 7697 7.348680 ACATAATAGCCAGGAAGGGATAATT 57.651 36.000 0.00 0.00 38.09 1.40
1581 7698 7.769652 ACATAATAGCCAGGAAGGGATAATTT 58.230 34.615 0.00 0.00 38.09 1.82
1582 7699 8.900802 ACATAATAGCCAGGAAGGGATAATTTA 58.099 33.333 0.00 0.00 38.09 1.40
1583 7700 9.927081 CATAATAGCCAGGAAGGGATAATTTAT 57.073 33.333 0.00 0.00 38.09 1.40
2204 8547 2.483876 CATGGCCGTAATAGGTGTGAG 58.516 52.381 0.00 0.00 0.00 3.51
2235 8663 2.902705 AGTAGCTTTGTGTGGTTCGA 57.097 45.000 0.00 0.00 0.00 3.71
2241 8874 2.604614 GCTTTGTGTGGTTCGATTGACC 60.605 50.000 0.00 0.00 37.69 4.02
2242 8875 1.600023 TTGTGTGGTTCGATTGACCC 58.400 50.000 2.36 0.00 36.30 4.46
2253 8886 4.759516 TCGATTGACCCTAAACAAAAGC 57.240 40.909 0.00 0.00 0.00 3.51
2287 9667 6.428771 GGTAAAGTTGGTGCAGTCATAGTAAA 59.571 38.462 0.00 0.00 0.00 2.01
2317 9697 2.038837 GCGTTGGTTAGACCTGCCC 61.039 63.158 0.00 0.00 39.58 5.36
2328 9708 0.886490 GACCTGCCCGCTAATCATGG 60.886 60.000 0.00 0.00 0.00 3.66
2362 9742 4.941263 AGAATCGTAAAGGCACTGCAAATA 59.059 37.500 2.82 0.00 40.86 1.40
2379 9759 6.434596 TGCAAATATATCGTAATGGTTGTGC 58.565 36.000 0.00 0.00 0.00 4.57
2381 9761 6.655062 CAAATATATCGTAATGGTTGTGCGT 58.345 36.000 0.00 0.00 0.00 5.24
2390 9770 4.621068 AATGGTTGTGCGTATCAATCAG 57.379 40.909 7.53 0.00 38.91 2.90
2399 9779 2.860735 GCGTATCAATCAGACACTCACC 59.139 50.000 0.00 0.00 0.00 4.02
2407 9787 1.691976 TCAGACACTCACCGACCAAAT 59.308 47.619 0.00 0.00 0.00 2.32
2412 9792 5.181245 CAGACACTCACCGACCAAATAAAAT 59.819 40.000 0.00 0.00 0.00 1.82
2413 9793 6.370442 CAGACACTCACCGACCAAATAAAATA 59.630 38.462 0.00 0.00 0.00 1.40
2416 9796 6.027749 CACTCACCGACCAAATAAAATAAGC 58.972 40.000 0.00 0.00 0.00 3.09
2439 9819 2.269940 ACCAGATTTGCCTCCACTAGT 58.730 47.619 0.00 0.00 0.00 2.57
2454 9834 7.015389 GCCTCCACTAGTAATAGTTAGGTGAAT 59.985 40.741 21.16 0.00 35.01 2.57
2582 10033 4.714632 ACTGGACCAAATATTACCATCGG 58.285 43.478 0.00 0.00 0.00 4.18
2739 10476 2.544721 TCTGCATGAAAGGGAGAGACT 58.455 47.619 0.00 0.00 41.10 3.24
2766 10503 5.161358 TGCTAGTAACGCATCATGTATAGC 58.839 41.667 0.00 0.00 34.98 2.97
2800 10547 3.704566 AGATCCAACGTTACTAGCATCCA 59.295 43.478 0.00 0.00 0.00 3.41
2895 10951 4.976731 CGCAGAATAAACACTATACGCTCT 59.023 41.667 0.00 0.00 0.00 4.09
3472 11529 6.147328 ACTCCTAGTAAATTCACTCGCAAAAC 59.853 38.462 0.00 0.00 0.00 2.43
3506 11563 0.321298 AAGTTCGTTACGGGCTGCAT 60.321 50.000 4.53 0.00 0.00 3.96
3534 11591 2.403987 CCGACTCCGCTCTGTACG 59.596 66.667 0.00 0.00 0.00 3.67
3588 11647 9.736023 ATTTTCTCAGAAACACAGTAATTGAAC 57.264 29.630 0.00 0.00 0.00 3.18
3590 11649 9.607988 TTTCTCAGAAACACAGTAATTGAACTA 57.392 29.630 0.00 0.00 0.00 2.24
3614 12034 5.818136 TTTCAATACTAGCTTCATGCACC 57.182 39.130 0.00 0.00 45.94 5.01
3618 12038 2.393271 ACTAGCTTCATGCACCAGTC 57.607 50.000 0.00 0.00 45.94 3.51
3619 12039 1.065854 ACTAGCTTCATGCACCAGTCC 60.066 52.381 0.00 0.00 45.94 3.85
3623 12043 0.742281 CTTCATGCACCAGTCCTCCG 60.742 60.000 0.00 0.00 0.00 4.63
3628 12048 1.374758 GCACCAGTCCTCCGTTCTG 60.375 63.158 0.00 0.00 0.00 3.02
3631 12051 1.374758 CCAGTCCTCCGTTCTGCAC 60.375 63.158 0.00 0.00 0.00 4.57
3632 12052 1.668294 CAGTCCTCCGTTCTGCACT 59.332 57.895 0.00 0.00 0.00 4.40
3648 12158 6.985188 TCTGCACTATACTGATTTTTCACC 57.015 37.500 0.00 0.00 0.00 4.02
3649 12159 6.711277 TCTGCACTATACTGATTTTTCACCT 58.289 36.000 0.00 0.00 0.00 4.00
3654 12164 9.937175 GCACTATACTGATTTTTCACCTAATTC 57.063 33.333 0.00 0.00 0.00 2.17
3659 12169 9.927081 ATACTGATTTTTCACCTAATTCCTCAT 57.073 29.630 0.00 0.00 0.00 2.90
3662 12172 9.401058 CTGATTTTTCACCTAATTCCTCATAGT 57.599 33.333 0.00 0.00 0.00 2.12
3669 12179 9.886132 TTCACCTAATTCCTCATAGTAAAACTC 57.114 33.333 0.00 0.00 0.00 3.01
3670 12180 9.268282 TCACCTAATTCCTCATAGTAAAACTCT 57.732 33.333 0.00 0.00 0.00 3.24
3708 12218 9.439500 AGTAACTTAACTAAATTCATTACCGCA 57.561 29.630 0.00 0.00 0.00 5.69
3711 12221 7.703328 ACTTAACTAAATTCATTACCGCATGG 58.297 34.615 0.00 0.00 42.84 3.66
3712 12222 7.554835 ACTTAACTAAATTCATTACCGCATGGA 59.445 33.333 0.00 0.00 39.21 3.41
3713 12223 6.959639 AACTAAATTCATTACCGCATGGAT 57.040 33.333 0.00 0.00 39.21 3.41
3714 12224 6.317789 ACTAAATTCATTACCGCATGGATG 57.682 37.500 0.00 0.00 39.21 3.51
3727 12237 1.262417 CATGGATGCACTACACATCGC 59.738 52.381 0.00 0.00 43.98 4.58
3728 12238 0.536724 TGGATGCACTACACATCGCT 59.463 50.000 0.00 0.00 43.98 4.93
3729 12239 1.754226 TGGATGCACTACACATCGCTA 59.246 47.619 0.00 0.00 43.98 4.26
3730 12240 2.128035 GGATGCACTACACATCGCTAC 58.872 52.381 0.00 0.00 43.98 3.58
3731 12241 1.781429 GATGCACTACACATCGCTACG 59.219 52.381 0.00 0.00 35.03 3.51
3732 12242 0.800683 TGCACTACACATCGCTACGC 60.801 55.000 0.00 0.00 0.00 4.42
3733 12243 1.480219 GCACTACACATCGCTACGCC 61.480 60.000 0.00 0.00 0.00 5.68
3734 12244 0.100682 CACTACACATCGCTACGCCT 59.899 55.000 0.00 0.00 0.00 5.52
3735 12245 1.332686 CACTACACATCGCTACGCCTA 59.667 52.381 0.00 0.00 0.00 3.93
3736 12246 2.019249 ACTACACATCGCTACGCCTAA 58.981 47.619 0.00 0.00 0.00 2.69
3737 12247 2.621998 ACTACACATCGCTACGCCTAAT 59.378 45.455 0.00 0.00 0.00 1.73
3738 12248 3.817084 ACTACACATCGCTACGCCTAATA 59.183 43.478 0.00 0.00 0.00 0.98
3739 12249 3.009301 ACACATCGCTACGCCTAATAC 57.991 47.619 0.00 0.00 0.00 1.89
3744 12254 4.518211 ACATCGCTACGCCTAATACTAGTT 59.482 41.667 0.00 0.00 0.00 2.24
3745 12255 4.478843 TCGCTACGCCTAATACTAGTTG 57.521 45.455 0.00 0.00 0.00 3.16
3748 12258 4.674211 CGCTACGCCTAATACTAGTTGTTC 59.326 45.833 0.00 0.00 0.00 3.18
3749 12259 5.585390 GCTACGCCTAATACTAGTTGTTCA 58.415 41.667 0.00 0.00 0.00 3.18
3751 12261 6.362820 GCTACGCCTAATACTAGTTGTTCATC 59.637 42.308 0.00 0.00 0.00 2.92
3753 12263 7.578310 ACGCCTAATACTAGTTGTTCATCTA 57.422 36.000 0.00 0.00 0.00 1.98
3756 12266 9.477484 CGCCTAATACTAGTTGTTCATCTAATT 57.523 33.333 0.00 0.00 0.00 1.40
3764 12274 8.037758 ACTAGTTGTTCATCTAATTCCTGACAG 58.962 37.037 0.00 0.00 0.00 3.51
3766 12276 7.907389 AGTTGTTCATCTAATTCCTGACAGTA 58.093 34.615 0.93 0.00 0.00 2.74
3769 12279 9.567776 TTGTTCATCTAATTCCTGACAGTAAAA 57.432 29.630 0.93 0.00 0.00 1.52
3770 12280 9.739276 TGTTCATCTAATTCCTGACAGTAAAAT 57.261 29.630 0.93 0.00 0.00 1.82
3771 12281 9.994432 GTTCATCTAATTCCTGACAGTAAAATG 57.006 33.333 0.93 0.00 0.00 2.32
3772 12282 8.213518 TCATCTAATTCCTGACAGTAAAATGC 57.786 34.615 0.93 0.00 0.00 3.56
3773 12283 7.283127 TCATCTAATTCCTGACAGTAAAATGCC 59.717 37.037 0.93 0.00 0.00 4.40
3774 12284 6.721318 TCTAATTCCTGACAGTAAAATGCCT 58.279 36.000 0.93 0.00 0.00 4.75
3775 12285 5.904362 AATTCCTGACAGTAAAATGCCTC 57.096 39.130 0.93 0.00 0.00 4.70
3777 12287 3.674997 TCCTGACAGTAAAATGCCTCAC 58.325 45.455 0.93 0.00 0.00 3.51
3778 12288 3.072330 TCCTGACAGTAAAATGCCTCACA 59.928 43.478 0.93 0.00 0.00 3.58
3779 12289 3.820467 CCTGACAGTAAAATGCCTCACAA 59.180 43.478 0.93 0.00 0.00 3.33
3781 12291 5.047802 CCTGACAGTAAAATGCCTCACAAAT 60.048 40.000 0.93 0.00 0.00 2.32
3782 12292 6.150976 CCTGACAGTAAAATGCCTCACAAATA 59.849 38.462 0.93 0.00 0.00 1.40
3783 12293 7.148018 CCTGACAGTAAAATGCCTCACAAATAT 60.148 37.037 0.93 0.00 0.00 1.28
3784 12294 8.800370 TGACAGTAAAATGCCTCACAAATATA 57.200 30.769 0.00 0.00 0.00 0.86
3785 12295 8.892723 TGACAGTAAAATGCCTCACAAATATAG 58.107 33.333 0.00 0.00 0.00 1.31
3786 12296 8.807948 ACAGTAAAATGCCTCACAAATATAGT 57.192 30.769 0.00 0.00 0.00 2.12
3787 12297 9.899661 ACAGTAAAATGCCTCACAAATATAGTA 57.100 29.630 0.00 0.00 0.00 1.82
3792 12302 8.574251 AAATGCCTCACAAATATAGTAACACA 57.426 30.769 0.00 0.00 0.00 3.72
3794 12304 7.372451 TGCCTCACAAATATAGTAACACAAC 57.628 36.000 0.00 0.00 0.00 3.32
3795 12305 7.165485 TGCCTCACAAATATAGTAACACAACT 58.835 34.615 0.00 0.00 0.00 3.16
3797 12307 9.158233 GCCTCACAAATATAGTAACACAACTAA 57.842 33.333 0.00 0.00 35.65 2.24
3819 12354 8.757877 ACTAAAATTTGGTTACCATATGCATGT 58.242 29.630 10.16 0.00 31.53 3.21
3821 12356 8.940768 AAAATTTGGTTACCATATGCATGTAC 57.059 30.769 10.16 0.00 31.53 2.90
3822 12357 7.652524 AATTTGGTTACCATATGCATGTACA 57.347 32.000 10.16 0.00 31.53 2.90
3823 12358 7.838079 ATTTGGTTACCATATGCATGTACAT 57.162 32.000 10.16 1.41 31.53 2.29
3824 12359 6.631971 TTGGTTACCATATGCATGTACATG 57.368 37.500 28.07 28.07 36.19 3.21
3826 12361 4.082787 GGTTACCATATGCATGTACATGGC 60.083 45.833 31.63 24.21 41.41 4.40
3827 12362 3.513909 ACCATATGCATGTACATGGCT 57.486 42.857 31.63 17.28 41.41 4.75
3828 12363 3.836146 ACCATATGCATGTACATGGCTT 58.164 40.909 31.63 23.06 41.41 4.35
3829 12364 4.217510 ACCATATGCATGTACATGGCTTT 58.782 39.130 31.63 18.60 41.41 3.51
3830 12365 4.279169 ACCATATGCATGTACATGGCTTTC 59.721 41.667 31.63 17.87 41.41 2.62
3831 12366 4.321452 CCATATGCATGTACATGGCTTTCC 60.321 45.833 31.63 17.24 39.16 3.13
3846 12381 5.815581 TGGCTTTCCATTACTACATCTTGT 58.184 37.500 0.00 0.00 37.47 3.16
3847 12382 6.245408 TGGCTTTCCATTACTACATCTTGTT 58.755 36.000 0.00 0.00 37.47 2.83
3849 12384 6.599638 GGCTTTCCATTACTACATCTTGTTCT 59.400 38.462 0.00 0.00 0.00 3.01
3850 12385 7.201652 GGCTTTCCATTACTACATCTTGTTCTC 60.202 40.741 0.00 0.00 0.00 2.87
3851 12386 7.550906 GCTTTCCATTACTACATCTTGTTCTCT 59.449 37.037 0.00 0.00 0.00 3.10
3860 12395 5.078411 ACATCTTGTTCTCTAATGACGCT 57.922 39.130 0.00 0.00 0.00 5.07
3861 12396 5.105752 ACATCTTGTTCTCTAATGACGCTC 58.894 41.667 0.00 0.00 0.00 5.03
3862 12397 4.783764 TCTTGTTCTCTAATGACGCTCA 57.216 40.909 0.00 0.00 0.00 4.26
3863 12398 4.486090 TCTTGTTCTCTAATGACGCTCAC 58.514 43.478 0.00 0.00 0.00 3.51
3865 12400 4.521130 TGTTCTCTAATGACGCTCACTT 57.479 40.909 0.00 0.00 0.00 3.16
3867 12402 6.020971 TGTTCTCTAATGACGCTCACTTTA 57.979 37.500 0.00 0.00 0.00 1.85
3868 12403 6.631016 TGTTCTCTAATGACGCTCACTTTAT 58.369 36.000 0.00 0.00 0.00 1.40
3869 12404 6.531594 TGTTCTCTAATGACGCTCACTTTATG 59.468 38.462 0.00 0.00 0.00 1.90
3871 12406 5.127194 TCTCTAATGACGCTCACTTTATGGT 59.873 40.000 0.00 0.00 0.00 3.55
3872 12407 5.109210 TCTAATGACGCTCACTTTATGGTG 58.891 41.667 0.00 0.00 38.44 4.17
3873 12408 2.093306 TGACGCTCACTTTATGGTGG 57.907 50.000 0.00 0.00 37.75 4.61
3875 12410 2.000447 GACGCTCACTTTATGGTGGAC 59.000 52.381 0.00 0.00 37.75 4.02
3877 12412 2.002586 CGCTCACTTTATGGTGGACTG 58.997 52.381 0.00 0.00 37.75 3.51
3878 12413 2.359900 GCTCACTTTATGGTGGACTGG 58.640 52.381 0.00 0.00 37.75 4.00
3881 12416 1.812571 CACTTTATGGTGGACTGGTGC 59.187 52.381 0.00 0.00 33.95 5.01
3882 12417 1.086696 CTTTATGGTGGACTGGTGCG 58.913 55.000 0.00 0.00 0.00 5.34
3884 12419 0.321210 TTATGGTGGACTGGTGCGTG 60.321 55.000 0.00 0.00 0.00 5.34
3885 12420 2.178876 TATGGTGGACTGGTGCGTGG 62.179 60.000 0.00 0.00 0.00 4.94
3890 12425 2.745037 GACTGGTGCGTGGGGTTA 59.255 61.111 0.00 0.00 0.00 2.85
3891 12426 1.375523 GACTGGTGCGTGGGGTTAG 60.376 63.158 0.00 0.00 0.00 2.34
3892 12427 1.823169 GACTGGTGCGTGGGGTTAGA 61.823 60.000 0.00 0.00 0.00 2.10
3893 12428 1.079127 CTGGTGCGTGGGGTTAGAG 60.079 63.158 0.00 0.00 0.00 2.43
3894 12429 2.267961 GGTGCGTGGGGTTAGAGG 59.732 66.667 0.00 0.00 0.00 3.69
3895 12430 2.590114 GGTGCGTGGGGTTAGAGGT 61.590 63.158 0.00 0.00 0.00 3.85
3898 12433 1.375523 GCGTGGGGTTAGAGGTGTG 60.376 63.158 0.00 0.00 0.00 3.82
3899 12434 1.375523 CGTGGGGTTAGAGGTGTGC 60.376 63.158 0.00 0.00 0.00 4.57
3900 12435 1.758592 GTGGGGTTAGAGGTGTGCA 59.241 57.895 0.00 0.00 0.00 4.57
3902 12437 1.557832 GTGGGGTTAGAGGTGTGCATA 59.442 52.381 0.00 0.00 0.00 3.14
3906 12441 3.270877 GGGTTAGAGGTGTGCATACTTG 58.729 50.000 13.64 0.00 0.00 3.16
3907 12442 3.307480 GGGTTAGAGGTGTGCATACTTGT 60.307 47.826 13.64 7.08 0.00 3.16
3911 12446 1.812571 GAGGTGTGCATACTTGTTGGG 59.187 52.381 13.64 0.00 0.00 4.12
3913 12448 2.158534 AGGTGTGCATACTTGTTGGGAA 60.159 45.455 13.64 0.00 0.00 3.97
3914 12449 2.228822 GGTGTGCATACTTGTTGGGAAG 59.771 50.000 13.64 0.00 0.00 3.46
3915 12450 2.884639 GTGTGCATACTTGTTGGGAAGT 59.115 45.455 6.31 0.00 39.54 3.01
3916 12451 2.884012 TGTGCATACTTGTTGGGAAGTG 59.116 45.455 0.00 0.00 36.80 3.16
3917 12452 1.885887 TGCATACTTGTTGGGAAGTGC 59.114 47.619 0.00 0.00 36.80 4.40
3918 12453 2.162681 GCATACTTGTTGGGAAGTGCT 58.837 47.619 0.00 0.00 36.80 4.40
3919 12454 3.244735 TGCATACTTGTTGGGAAGTGCTA 60.245 43.478 0.00 0.00 36.80 3.49
3920 12455 3.756434 GCATACTTGTTGGGAAGTGCTAA 59.244 43.478 0.00 0.00 36.80 3.09
3921 12456 4.399303 GCATACTTGTTGGGAAGTGCTAAT 59.601 41.667 0.00 0.00 36.80 1.73
3927 12635 4.929479 TGTTGGGAAGTGCTAATTACCAT 58.071 39.130 1.92 0.00 40.40 3.55
3935 12644 7.286775 GGGAAGTGCTAATTACCATATTTTCCA 59.713 37.037 12.95 0.00 32.80 3.53
3939 12648 9.014297 AGTGCTAATTACCATATTTTCCATAGC 57.986 33.333 0.00 0.00 0.00 2.97
3940 12649 9.014297 GTGCTAATTACCATATTTTCCATAGCT 57.986 33.333 0.00 0.00 0.00 3.32
3951 13198 9.013229 CATATTTTCCATAGCTTTACCATGCTA 57.987 33.333 0.00 0.00 44.47 3.49
3958 13205 6.919662 CCATAGCTTTACCATGCTACAAATTG 59.080 38.462 0.00 0.00 43.38 2.32
3960 13207 6.588719 AGCTTTACCATGCTACAAATTGAA 57.411 33.333 0.00 0.00 37.81 2.69
3964 13211 7.484959 GCTTTACCATGCTACAAATTGAACTAC 59.515 37.037 0.00 0.00 0.00 2.73
3965 13212 5.897377 ACCATGCTACAAATTGAACTACC 57.103 39.130 0.00 0.00 0.00 3.18
3966 13213 5.321102 ACCATGCTACAAATTGAACTACCA 58.679 37.500 0.00 0.00 0.00 3.25
3967 13214 5.183140 ACCATGCTACAAATTGAACTACCAC 59.817 40.000 0.00 0.00 0.00 4.16
3968 13215 5.415701 CCATGCTACAAATTGAACTACCACT 59.584 40.000 0.00 0.00 0.00 4.00
3969 13216 6.597672 CCATGCTACAAATTGAACTACCACTA 59.402 38.462 0.00 0.00 0.00 2.74
3970 13217 7.120579 CCATGCTACAAATTGAACTACCACTAA 59.879 37.037 0.00 0.00 0.00 2.24
3971 13218 8.677300 CATGCTACAAATTGAACTACCACTAAT 58.323 33.333 0.00 0.00 0.00 1.73
3973 13220 8.726988 TGCTACAAATTGAACTACCACTAATTC 58.273 33.333 0.00 0.00 0.00 2.17
3974 13221 8.726988 GCTACAAATTGAACTACCACTAATTCA 58.273 33.333 0.00 0.00 0.00 2.57
3977 13224 9.520515 ACAAATTGAACTACCACTAATTCATCT 57.479 29.630 0.00 0.00 31.45 2.90
3978 13225 9.778993 CAAATTGAACTACCACTAATTCATCTG 57.221 33.333 0.00 0.00 31.45 2.90
3979 13226 9.739276 AAATTGAACTACCACTAATTCATCTGA 57.261 29.630 0.00 0.00 31.45 3.27
3980 13227 8.954950 ATTGAACTACCACTAATTCATCTGAG 57.045 34.615 0.00 0.00 31.45 3.35
3981 13228 6.878317 TGAACTACCACTAATTCATCTGAGG 58.122 40.000 0.00 0.00 0.00 3.86
3983 13230 6.227298 ACTACCACTAATTCATCTGAGGTG 57.773 41.667 0.00 0.00 0.00 4.00
3984 13231 4.494091 ACCACTAATTCATCTGAGGTGG 57.506 45.455 15.46 15.46 45.48 4.61
3986 13233 5.614324 CCACTAATTCATCTGAGGTGGTA 57.386 43.478 0.00 0.00 38.22 3.25
3987 13234 5.989477 CCACTAATTCATCTGAGGTGGTAA 58.011 41.667 0.00 0.00 38.22 2.85
3988 13235 6.414732 CCACTAATTCATCTGAGGTGGTAAA 58.585 40.000 0.00 0.00 38.22 2.01
3992 13239 1.899814 TCATCTGAGGTGGTAAAGCGT 59.100 47.619 0.00 0.00 0.00 5.07
3993 13240 2.301870 TCATCTGAGGTGGTAAAGCGTT 59.698 45.455 0.00 0.00 0.00 4.84
3994 13241 3.512329 TCATCTGAGGTGGTAAAGCGTTA 59.488 43.478 0.00 0.00 0.00 3.18
3995 13242 3.308438 TCTGAGGTGGTAAAGCGTTAC 57.692 47.619 13.40 13.40 39.18 2.50
4008 13255 3.538634 AGCGTTACCATTTCCTCTACC 57.461 47.619 0.00 0.00 0.00 3.18
4009 13256 3.105283 AGCGTTACCATTTCCTCTACCT 58.895 45.455 0.00 0.00 0.00 3.08
4010 13257 3.118738 AGCGTTACCATTTCCTCTACCTG 60.119 47.826 0.00 0.00 0.00 4.00
4011 13258 3.369157 GCGTTACCATTTCCTCTACCTGT 60.369 47.826 0.00 0.00 0.00 4.00
4012 13259 4.828829 CGTTACCATTTCCTCTACCTGTT 58.171 43.478 0.00 0.00 0.00 3.16
4013 13260 5.243207 CGTTACCATTTCCTCTACCTGTTT 58.757 41.667 0.00 0.00 0.00 2.83
4014 13261 5.704053 CGTTACCATTTCCTCTACCTGTTTT 59.296 40.000 0.00 0.00 0.00 2.43
4015 13262 6.875195 CGTTACCATTTCCTCTACCTGTTTTA 59.125 38.462 0.00 0.00 0.00 1.52
4017 13264 8.890718 GTTACCATTTCCTCTACCTGTTTTATC 58.109 37.037 0.00 0.00 0.00 1.75
4018 13265 6.113411 ACCATTTCCTCTACCTGTTTTATCG 58.887 40.000 0.00 0.00 0.00 2.92
4019 13266 5.007724 CCATTTCCTCTACCTGTTTTATCGC 59.992 44.000 0.00 0.00 0.00 4.58
4020 13267 3.814005 TCCTCTACCTGTTTTATCGCC 57.186 47.619 0.00 0.00 0.00 5.54
4022 13269 3.516300 TCCTCTACCTGTTTTATCGCCAA 59.484 43.478 0.00 0.00 0.00 4.52
4026 13273 6.710744 CCTCTACCTGTTTTATCGCCAATAAT 59.289 38.462 0.00 0.00 29.96 1.28
4028 13275 9.268268 CTCTACCTGTTTTATCGCCAATAATTA 57.732 33.333 0.00 0.00 29.96 1.40
4029 13276 9.268268 TCTACCTGTTTTATCGCCAATAATTAG 57.732 33.333 0.00 0.00 29.96 1.73
4030 13277 6.735130 ACCTGTTTTATCGCCAATAATTAGC 58.265 36.000 0.00 0.00 29.96 3.09
4031 13278 6.320164 ACCTGTTTTATCGCCAATAATTAGCA 59.680 34.615 0.00 0.00 29.96 3.49
4032 13279 6.857964 CCTGTTTTATCGCCAATAATTAGCAG 59.142 38.462 0.00 0.00 29.96 4.24
4033 13280 6.205784 TGTTTTATCGCCAATAATTAGCAGC 58.794 36.000 0.00 0.00 29.96 5.25
4034 13281 4.661993 TTATCGCCAATAATTAGCAGCG 57.338 40.909 15.69 15.69 44.61 5.18
4035 13282 1.225855 TCGCCAATAATTAGCAGCGG 58.774 50.000 19.43 5.42 43.50 5.52
4036 13283 0.385974 CGCCAATAATTAGCAGCGGC 60.386 55.000 14.58 0.00 39.89 6.53
4037 13284 0.667993 GCCAATAATTAGCAGCGGCA 59.332 50.000 12.44 0.00 44.61 5.69
4038 13285 1.335324 GCCAATAATTAGCAGCGGCAG 60.335 52.381 12.44 0.00 44.61 4.85
4039 13286 1.949525 CCAATAATTAGCAGCGGCAGT 59.050 47.619 12.44 0.00 44.61 4.40
4040 13287 3.138304 CCAATAATTAGCAGCGGCAGTA 58.862 45.455 12.44 0.00 44.61 2.74
4041 13288 3.753272 CCAATAATTAGCAGCGGCAGTAT 59.247 43.478 12.44 0.00 44.61 2.12
4066 13313 2.667473 ACGGAAGTTAACCATCGAGG 57.333 50.000 15.61 0.00 46.40 4.63
4067 13314 1.206371 ACGGAAGTTAACCATCGAGGG 59.794 52.381 15.94 15.94 46.40 4.30
4069 13316 2.102588 CGGAAGTTAACCATCGAGGGAT 59.897 50.000 25.24 14.49 43.89 3.85
4070 13317 6.479205 ACGGAAGTTAACCATCGAGGGATG 62.479 50.000 25.24 0.00 46.40 3.51
4081 13328 5.869753 CATCGAGGGATGGTAATGAAATC 57.130 43.478 0.00 0.00 45.15 2.17
4083 13330 5.366482 TCGAGGGATGGTAATGAAATCAA 57.634 39.130 0.00 0.00 0.00 2.57
4084 13331 5.750524 TCGAGGGATGGTAATGAAATCAAA 58.249 37.500 0.00 0.00 0.00 2.69
4085 13332 6.364701 TCGAGGGATGGTAATGAAATCAAAT 58.635 36.000 0.00 0.00 0.00 2.32
4086 13333 6.262944 TCGAGGGATGGTAATGAAATCAAATG 59.737 38.462 0.00 0.00 0.00 2.32
4087 13334 6.165700 AGGGATGGTAATGAAATCAAATGC 57.834 37.500 0.00 0.00 0.00 3.56
4090 13337 6.993902 GGGATGGTAATGAAATCAAATGCATT 59.006 34.615 5.99 5.99 35.38 3.56
4091 13338 8.149647 GGGATGGTAATGAAATCAAATGCATTA 58.850 33.333 13.39 0.00 33.45 1.90
4092 13339 8.981647 GGATGGTAATGAAATCAAATGCATTAC 58.018 33.333 13.39 13.34 46.06 1.89
4121 13453 9.595823 TTTCTTCTATAGGATTTTACCTTCGTG 57.404 33.333 0.00 0.00 41.00 4.35
4127 13459 7.964604 ATAGGATTTTACCTTCGTGATTAGC 57.035 36.000 0.00 0.00 41.00 3.09
4128 13460 4.809426 AGGATTTTACCTTCGTGATTAGCG 59.191 41.667 0.00 0.00 36.86 4.26
4129 13461 4.025145 GGATTTTACCTTCGTGATTAGCGG 60.025 45.833 0.00 0.00 0.00 5.52
4131 13463 2.572191 TACCTTCGTGATTAGCGGTG 57.428 50.000 0.00 0.00 0.00 4.94
4132 13464 0.892755 ACCTTCGTGATTAGCGGTGA 59.107 50.000 0.00 0.00 0.00 4.02
4133 13465 1.135083 ACCTTCGTGATTAGCGGTGAG 60.135 52.381 0.00 0.00 0.00 3.51
4134 13466 1.560923 CTTCGTGATTAGCGGTGAGG 58.439 55.000 0.00 0.00 0.00 3.86
4135 13467 1.134367 CTTCGTGATTAGCGGTGAGGA 59.866 52.381 0.00 0.00 0.00 3.71
4136 13468 0.738975 TCGTGATTAGCGGTGAGGAG 59.261 55.000 0.00 0.00 0.00 3.69
4137 13469 0.249073 CGTGATTAGCGGTGAGGAGG 60.249 60.000 0.00 0.00 0.00 4.30
4138 13470 0.824759 GTGATTAGCGGTGAGGAGGT 59.175 55.000 0.00 0.00 0.00 3.85
4139 13471 1.112113 TGATTAGCGGTGAGGAGGTC 58.888 55.000 0.00 0.00 0.00 3.85
4140 13472 0.389757 GATTAGCGGTGAGGAGGTCC 59.610 60.000 0.00 0.00 0.00 4.46
4141 13473 1.392710 ATTAGCGGTGAGGAGGTCCG 61.393 60.000 0.00 0.00 45.94 4.79
4161 13493 3.528370 CGACCCGCCTAGGACCAG 61.528 72.222 14.75 0.00 45.00 4.00
4162 13494 3.851128 GACCCGCCTAGGACCAGC 61.851 72.222 14.75 0.00 45.00 4.85
4166 13498 4.227134 CGCCTAGGACCAGCGCAT 62.227 66.667 14.75 0.00 43.72 4.73
4167 13499 2.856628 CGCCTAGGACCAGCGCATA 61.857 63.158 14.75 0.00 43.72 3.14
4168 13500 1.301009 GCCTAGGACCAGCGCATAC 60.301 63.158 14.75 0.00 0.00 2.39
4169 13501 1.007271 CCTAGGACCAGCGCATACG 60.007 63.158 11.47 0.00 44.07 3.06
4170 13502 1.452953 CCTAGGACCAGCGCATACGA 61.453 60.000 11.47 0.00 43.93 3.43
4181 13513 7.306632 GGACCAGCGCATACGATATATATTTTC 60.307 40.741 11.47 0.00 43.93 2.29
4217 13549 9.389570 CTTTTTCCGTCGTAAATAAGACAAAAT 57.610 29.630 7.18 0.00 37.23 1.82
4261 13593 0.818296 ATTCCGGACTTCTCACTCGG 59.182 55.000 1.83 0.00 41.80 4.63
4346 13686 1.530323 TGGCGCCTTTAGGAAAGAAC 58.470 50.000 29.70 0.00 41.02 3.01
4358 13698 2.093764 AGGAAAGAACATCTCTGGAGCG 60.094 50.000 0.00 0.00 33.37 5.03
4376 13716 2.017049 GCGGTGCTCCTAATTGTCATT 58.983 47.619 2.85 0.00 0.00 2.57
4382 13722 4.635765 GTGCTCCTAATTGTCATTGTAGCA 59.364 41.667 0.00 0.00 33.64 3.49
4791 14225 0.673985 TTGCTAGCGCTCCGATACAT 59.326 50.000 16.34 0.00 36.97 2.29
4876 14848 9.634163 TTGGCTCATATGTAATAGTAATACACG 57.366 33.333 1.90 0.00 36.19 4.49
4924 14898 6.036517 CGTTTGAGGGTGAGATTCTATTCAAG 59.963 42.308 0.00 0.00 0.00 3.02
4944 14918 8.850454 TTCAAGTATGAAGTTTTTGTACTTGC 57.150 30.769 15.16 0.00 45.81 4.01
4945 14919 7.990917 TCAAGTATGAAGTTTTTGTACTTGCA 58.009 30.769 15.16 0.00 45.81 4.08
4946 14920 7.913297 TCAAGTATGAAGTTTTTGTACTTGCAC 59.087 33.333 15.16 0.00 45.81 4.57
4947 14921 7.328277 AGTATGAAGTTTTTGTACTTGCACA 57.672 32.000 0.00 0.00 38.43 4.57
4948 14922 7.767261 AGTATGAAGTTTTTGTACTTGCACAA 58.233 30.769 0.00 0.00 38.43 3.33
4949 14923 8.247562 AGTATGAAGTTTTTGTACTTGCACAAA 58.752 29.630 0.00 0.00 44.50 2.83
4950 14924 6.698359 TGAAGTTTTTGTACTTGCACAAAC 57.302 33.333 1.12 2.03 45.52 2.93
4951 14925 6.451393 TGAAGTTTTTGTACTTGCACAAACT 58.549 32.000 5.95 5.95 45.57 2.66
4952 14926 6.364706 TGAAGTTTTTGTACTTGCACAAACTG 59.635 34.615 10.96 0.00 43.98 3.16
4953 14927 5.778862 AGTTTTTGTACTTGCACAAACTGT 58.221 33.333 9.83 0.00 45.52 3.55
4954 14928 6.915349 AGTTTTTGTACTTGCACAAACTGTA 58.085 32.000 9.83 0.00 45.52 2.74
4955 14929 7.543756 AGTTTTTGTACTTGCACAAACTGTAT 58.456 30.769 9.83 0.00 45.52 2.29
4956 14930 8.032451 AGTTTTTGTACTTGCACAAACTGTATT 58.968 29.630 9.83 0.00 45.52 1.89
4957 14931 8.652463 GTTTTTGTACTTGCACAAACTGTATTT 58.348 29.630 1.12 0.00 45.52 1.40
4958 14932 8.764524 TTTTGTACTTGCACAAACTGTATTTT 57.235 26.923 1.12 0.00 45.52 1.82
4959 14933 7.748031 TTGTACTTGCACAAACTGTATTTTG 57.252 32.000 0.00 0.00 41.47 2.44
4960 14934 6.269315 TGTACTTGCACAAACTGTATTTTGG 58.731 36.000 0.00 0.00 40.25 3.28
4961 14935 5.590530 ACTTGCACAAACTGTATTTTGGA 57.409 34.783 0.00 0.00 40.25 3.53
4962 14936 5.348164 ACTTGCACAAACTGTATTTTGGAC 58.652 37.500 0.00 0.00 40.25 4.02
4963 14937 3.958704 TGCACAAACTGTATTTTGGACG 58.041 40.909 1.04 0.00 40.25 4.79
4964 14938 3.628032 TGCACAAACTGTATTTTGGACGA 59.372 39.130 0.00 0.00 40.25 4.20
4965 14939 4.219033 GCACAAACTGTATTTTGGACGAG 58.781 43.478 0.00 0.00 40.25 4.18
4966 14940 4.783242 CACAAACTGTATTTTGGACGAGG 58.217 43.478 0.00 0.00 40.25 4.63
4967 14941 4.274950 CACAAACTGTATTTTGGACGAGGT 59.725 41.667 0.00 0.00 40.25 3.85
4968 14942 4.885325 ACAAACTGTATTTTGGACGAGGTT 59.115 37.500 0.00 0.00 40.25 3.50
4969 14943 6.017770 CACAAACTGTATTTTGGACGAGGTTA 60.018 38.462 0.00 0.00 40.25 2.85
4970 14944 6.017687 ACAAACTGTATTTTGGACGAGGTTAC 60.018 38.462 0.00 0.00 40.25 2.50
4971 14945 4.572909 ACTGTATTTTGGACGAGGTTACC 58.427 43.478 0.00 0.00 0.00 2.85
4972 14946 3.937079 CTGTATTTTGGACGAGGTTACCC 59.063 47.826 0.00 0.00 0.00 3.69
5088 15139 4.115199 GCATGGAGGCCGGGAAGT 62.115 66.667 2.18 0.00 0.00 3.01
5091 15142 1.694169 ATGGAGGCCGGGAAGTGAT 60.694 57.895 2.18 0.00 0.00 3.06
5199 15256 2.105128 CCATCGCCGGAGTCTGTC 59.895 66.667 5.05 0.00 0.00 3.51
5208 15265 0.738975 CGGAGTCTGTCGAGGCATAA 59.261 55.000 0.00 0.00 0.00 1.90
5267 15324 1.517832 CTTCCTCCTCGCCGATGTT 59.482 57.895 0.00 0.00 0.00 2.71
5272 15329 2.582498 CCTCGCCGATGTTCGTCC 60.582 66.667 0.00 0.00 38.40 4.79
5275 15332 3.245315 CGCCGATGTTCGTCCGTC 61.245 66.667 0.00 0.00 38.40 4.79
5276 15333 2.181021 GCCGATGTTCGTCCGTCT 59.819 61.111 0.00 0.00 38.40 4.18
5277 15334 1.872679 GCCGATGTTCGTCCGTCTC 60.873 63.158 0.00 0.00 38.40 3.36
5355 21704 3.985019 TCGCCTACATAACCTGGAAAA 57.015 42.857 0.00 0.00 0.00 2.29
5444 21805 7.144722 TCGATCAAGATTAACATGCTGTTTT 57.855 32.000 6.82 0.00 41.45 2.43
5532 21894 4.395959 AAGCCTCGTGTAATCGGATAAA 57.604 40.909 0.00 0.00 0.00 1.40
5580 21942 2.654912 CGACAACGCTCGAACCACC 61.655 63.158 0.00 0.00 35.58 4.61
5755 22127 7.284489 AGAGCAAACACACCTTGAGTAATAAAA 59.716 33.333 0.00 0.00 0.00 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 8.871686 AGTTAGTCAAATTTTACAAAGCTTGG 57.128 30.769 0.00 0.00 34.12 3.61
238 244 3.107601 TGATGAGTACTCCCTCCCTTTG 58.892 50.000 20.11 0.00 0.00 2.77
295 311 1.679032 GGCCCTGTCTTACATGTGTCC 60.679 57.143 9.11 0.00 0.00 4.02
357 373 4.526970 CATAAGGCCCTGTTTGTATGAGT 58.473 43.478 0.00 0.00 0.00 3.41
363 379 1.427368 TGTCCATAAGGCCCTGTTTGT 59.573 47.619 0.00 0.00 33.74 2.83
380 396 8.553459 TCTCATGGAGTTTTCTATTTCTTGTC 57.447 34.615 0.00 0.00 0.00 3.18
400 429 4.019501 ACATGACCAGCTTTCTTCTCTCAT 60.020 41.667 0.00 0.00 0.00 2.90
403 432 5.690464 ATACATGACCAGCTTTCTTCTCT 57.310 39.130 0.00 0.00 0.00 3.10
404 433 7.849804 TTAATACATGACCAGCTTTCTTCTC 57.150 36.000 0.00 0.00 0.00 2.87
405 434 9.553064 CTATTAATACATGACCAGCTTTCTTCT 57.447 33.333 0.00 0.00 0.00 2.85
406 435 9.331282 ACTATTAATACATGACCAGCTTTCTTC 57.669 33.333 0.00 0.00 0.00 2.87
407 436 9.113838 CACTATTAATACATGACCAGCTTTCTT 57.886 33.333 0.00 0.00 0.00 2.52
409 438 8.662781 TCACTATTAATACATGACCAGCTTTC 57.337 34.615 0.00 0.00 0.00 2.62
410 439 9.113838 CTTCACTATTAATACATGACCAGCTTT 57.886 33.333 0.00 0.00 0.00 3.51
411 440 8.486210 TCTTCACTATTAATACATGACCAGCTT 58.514 33.333 0.00 0.00 0.00 3.74
413 442 7.171678 GGTCTTCACTATTAATACATGACCAGC 59.828 40.741 0.00 8.58 39.73 4.85
414 443 8.424918 AGGTCTTCACTATTAATACATGACCAG 58.575 37.037 19.49 11.15 41.66 4.00
415 444 8.319057 AGGTCTTCACTATTAATACATGACCA 57.681 34.615 19.49 5.70 41.66 4.02
443 472 7.945109 TGAGCTCTCAACCTACACATATAGTAT 59.055 37.037 16.19 0.00 36.53 2.12
453 488 2.289072 GCAACTGAGCTCTCAACCTACA 60.289 50.000 16.19 0.00 39.39 2.74
511 548 6.257994 TCTTATCCTCCATCAAAGCAAGAT 57.742 37.500 0.00 0.00 0.00 2.40
512 549 5.698741 TCTTATCCTCCATCAAAGCAAGA 57.301 39.130 0.00 0.00 0.00 3.02
573 612 1.308047 TCAAATCACACTGTTGCGCT 58.692 45.000 9.73 0.00 0.00 5.92
574 613 2.336554 ATCAAATCACACTGTTGCGC 57.663 45.000 0.00 0.00 0.00 6.09
724 767 2.306805 TCAGCATTTGATGACCAGGTCT 59.693 45.455 20.82 6.21 35.30 3.85
923 6822 3.118956 GGTGGATGATCGAGTGAGAAGTT 60.119 47.826 0.00 0.00 0.00 2.66
995 6895 0.597568 TTCTGAAGGCGCCATTGTTG 59.402 50.000 31.54 13.29 0.00 3.33
1025 6930 3.198068 ACAATTAAGAGCACGATCGCAT 58.802 40.909 16.60 0.14 0.00 4.73
1039 6944 3.213506 CGGAGGCCATGATGACAATTAA 58.786 45.455 5.01 0.00 0.00 1.40
1126 7031 6.400621 GCCAATTTAATGCCAAAACGACTTAC 60.401 38.462 0.00 0.00 0.00 2.34
1274 7189 1.269998 GAGTATCTAATGGACGCCGCT 59.730 52.381 0.00 0.00 0.00 5.52
1275 7190 1.699343 GAGTATCTAATGGACGCCGC 58.301 55.000 0.00 0.00 0.00 6.53
1298 7213 5.902613 AATTGCTGCTTATGTGTGTGTAT 57.097 34.783 0.00 0.00 0.00 2.29
1352 7271 1.274728 TGGCATACACATTTGCAACCC 59.725 47.619 0.00 0.00 40.66 4.11
1361 7280 2.165030 GCTTTCAGCTTGGCATACACAT 59.835 45.455 0.00 0.00 38.45 3.21
1362 7281 1.541147 GCTTTCAGCTTGGCATACACA 59.459 47.619 0.00 0.00 38.45 3.72
1423 7342 2.873133 ACGAGCAGTAGGAATAGCAC 57.127 50.000 0.00 0.00 0.00 4.40
1510 7459 7.764141 TTTAATAAACAGGAGGGGTTACAAC 57.236 36.000 0.00 0.00 0.00 3.32
1511 7460 8.779096 TTTTTAATAAACAGGAGGGGTTACAA 57.221 30.769 0.00 0.00 0.00 2.41
1551 7666 7.881912 TCCCTTCCTGGCTATTATGTAATAA 57.118 36.000 0.00 0.00 44.01 1.40
1556 7673 6.977244 ATTATCCCTTCCTGGCTATTATGT 57.023 37.500 0.00 0.00 0.00 2.29
1557 7674 9.927081 ATAAATTATCCCTTCCTGGCTATTATG 57.073 33.333 0.00 0.00 0.00 1.90
1631 7762 7.121315 GCTGCCCTTTTATAATCGATCCTTATT 59.879 37.037 0.00 0.00 0.00 1.40
1672 7803 6.780901 AGAAAAGAAAGGTTACTTCCCCTAG 58.219 40.000 0.00 0.00 35.41 3.02
2204 8547 7.360101 CCACACAAAGCTACTAGTAAACATCAC 60.360 40.741 3.76 0.00 0.00 3.06
2253 8886 4.202101 TGCACCAACTTTACCATGAAACAG 60.202 41.667 0.00 0.00 0.00 3.16
2287 9667 0.108585 ACCAACGCACAAGACTCCAT 59.891 50.000 0.00 0.00 0.00 3.41
2317 9697 1.876156 GAAAGGGAGCCATGATTAGCG 59.124 52.381 0.00 0.00 0.00 4.26
2328 9708 2.981859 TACGATTCTGGAAAGGGAGC 57.018 50.000 0.00 0.00 0.00 4.70
2362 9742 5.534407 TGATACGCACAACCATTACGATAT 58.466 37.500 0.00 0.00 0.00 1.63
2379 9759 3.108881 CGGTGAGTGTCTGATTGATACG 58.891 50.000 0.00 0.00 40.99 3.06
2381 9761 3.130516 GGTCGGTGAGTGTCTGATTGATA 59.869 47.826 0.00 0.00 0.00 2.15
2390 9770 5.622770 ATTTTATTTGGTCGGTGAGTGTC 57.377 39.130 0.00 0.00 0.00 3.67
2399 9779 7.087639 TCTGGTTTGCTTATTTTATTTGGTCG 58.912 34.615 0.00 0.00 0.00 4.79
2582 10033 9.847224 TTATGTCTCTCCCTTCCATATAAAAAC 57.153 33.333 0.00 0.00 0.00 2.43
2800 10547 1.227943 TGCTTGCGCCAGTTTCTCT 60.228 52.632 10.52 0.00 34.43 3.10
2822 10569 2.976882 TCTAAGTAACCAACCAGCCACT 59.023 45.455 0.00 0.00 0.00 4.00
2832 10580 1.476891 CGCTCCTGCTCTAAGTAACCA 59.523 52.381 0.00 0.00 36.97 3.67
3256 11312 4.530710 AAATTACGCTCCCGCTCATATA 57.469 40.909 0.00 0.00 38.22 0.86
3372 11428 5.189145 ACCTAGTAACAGATTCAATCCCGTT 59.811 40.000 7.69 7.69 32.31 4.44
3374 11430 5.050490 CACCTAGTAACAGATTCAATCCCG 58.950 45.833 0.00 0.00 0.00 5.14
3472 11529 8.749499 CGTAACGAACTTAATTCCCTTACTATG 58.251 37.037 0.00 0.00 33.26 2.23
3506 11563 2.680352 GAGTCGGGGTCTGCTCCA 60.680 66.667 0.00 0.00 33.89 3.86
3585 11644 9.657121 GCATGAAGCTAGTATTGAAATTAGTTC 57.343 33.333 0.00 0.00 41.15 3.01
3587 11646 8.616076 GTGCATGAAGCTAGTATTGAAATTAGT 58.384 33.333 0.00 0.00 45.94 2.24
3588 11647 8.072567 GGTGCATGAAGCTAGTATTGAAATTAG 58.927 37.037 0.00 0.00 45.94 1.73
3590 11649 6.377996 TGGTGCATGAAGCTAGTATTGAAATT 59.622 34.615 4.14 0.00 45.94 1.82
3594 12010 4.080919 ACTGGTGCATGAAGCTAGTATTGA 60.081 41.667 4.14 0.00 45.94 2.57
3598 12014 2.168521 GGACTGGTGCATGAAGCTAGTA 59.831 50.000 4.14 0.00 45.94 1.82
3600 12016 1.209019 AGGACTGGTGCATGAAGCTAG 59.791 52.381 4.14 2.90 45.94 3.42
3604 12020 0.742281 CGGAGGACTGGTGCATGAAG 60.742 60.000 0.00 0.00 0.00 3.02
3605 12025 1.296392 CGGAGGACTGGTGCATGAA 59.704 57.895 0.00 0.00 0.00 2.57
3610 12030 1.374758 CAGAACGGAGGACTGGTGC 60.375 63.158 0.00 0.00 32.98 5.01
3614 12034 0.888619 TAGTGCAGAACGGAGGACTG 59.111 55.000 0.00 0.00 37.03 3.51
3618 12038 2.688446 TCAGTATAGTGCAGAACGGAGG 59.312 50.000 2.40 0.00 0.00 4.30
3619 12039 4.576216 ATCAGTATAGTGCAGAACGGAG 57.424 45.455 2.40 0.00 0.00 4.63
3623 12043 7.119846 AGGTGAAAAATCAGTATAGTGCAGAAC 59.880 37.037 2.40 0.00 0.00 3.01
3628 12048 9.937175 GAATTAGGTGAAAAATCAGTATAGTGC 57.063 33.333 2.40 0.00 0.00 4.40
3682 12192 9.439500 TGCGGTAATGAATTTAGTTAAGTTACT 57.561 29.630 0.00 0.00 0.00 2.24
3685 12195 8.188139 CCATGCGGTAATGAATTTAGTTAAGTT 58.812 33.333 0.00 0.00 0.00 2.66
3687 12197 7.925993 TCCATGCGGTAATGAATTTAGTTAAG 58.074 34.615 0.00 0.00 0.00 1.85
3688 12198 7.867305 TCCATGCGGTAATGAATTTAGTTAA 57.133 32.000 0.00 0.00 0.00 2.01
3689 12199 7.521423 GCATCCATGCGGTAATGAATTTAGTTA 60.521 37.037 0.00 0.00 44.67 2.24
3690 12200 6.735694 GCATCCATGCGGTAATGAATTTAGTT 60.736 38.462 0.00 0.00 44.67 2.24
3693 12203 5.119931 GCATCCATGCGGTAATGAATTTA 57.880 39.130 0.00 0.00 44.67 1.40
3694 12204 3.981211 GCATCCATGCGGTAATGAATTT 58.019 40.909 0.00 0.00 44.67 1.82
3695 12205 3.648339 GCATCCATGCGGTAATGAATT 57.352 42.857 0.00 0.00 44.67 2.17
3707 12217 1.262417 GCGATGTGTAGTGCATCCATG 59.738 52.381 0.00 0.00 39.48 3.66
3708 12218 1.139654 AGCGATGTGTAGTGCATCCAT 59.860 47.619 0.00 0.00 39.48 3.41
3709 12219 0.536724 AGCGATGTGTAGTGCATCCA 59.463 50.000 0.00 0.00 39.48 3.41
3710 12220 2.128035 GTAGCGATGTGTAGTGCATCC 58.872 52.381 0.00 0.00 39.48 3.51
3711 12221 1.781429 CGTAGCGATGTGTAGTGCATC 59.219 52.381 0.00 0.00 39.32 3.91
3712 12222 1.840181 CGTAGCGATGTGTAGTGCAT 58.160 50.000 0.00 0.00 0.00 3.96
3713 12223 3.322526 CGTAGCGATGTGTAGTGCA 57.677 52.632 0.00 0.00 0.00 4.57
3727 12237 7.649973 AGATGAACAACTAGTATTAGGCGTAG 58.350 38.462 0.00 0.00 0.00 3.51
3728 12238 7.578310 AGATGAACAACTAGTATTAGGCGTA 57.422 36.000 0.00 0.00 0.00 4.42
3729 12239 6.466885 AGATGAACAACTAGTATTAGGCGT 57.533 37.500 0.00 0.00 0.00 5.68
3730 12240 9.477484 AATTAGATGAACAACTAGTATTAGGCG 57.523 33.333 0.00 0.00 0.00 5.52
3737 12247 9.031537 TGTCAGGAATTAGATGAACAACTAGTA 57.968 33.333 0.00 0.00 0.00 1.82
3738 12248 7.907389 TGTCAGGAATTAGATGAACAACTAGT 58.093 34.615 0.00 0.00 0.00 2.57
3739 12249 8.037758 ACTGTCAGGAATTAGATGAACAACTAG 58.962 37.037 4.53 0.00 0.00 2.57
3744 12254 9.739276 ATTTTACTGTCAGGAATTAGATGAACA 57.261 29.630 4.53 0.00 0.00 3.18
3745 12255 9.994432 CATTTTACTGTCAGGAATTAGATGAAC 57.006 33.333 4.53 0.00 0.00 3.18
3748 12258 7.284034 AGGCATTTTACTGTCAGGAATTAGATG 59.716 37.037 4.53 5.87 0.00 2.90
3749 12259 7.349598 AGGCATTTTACTGTCAGGAATTAGAT 58.650 34.615 4.53 0.00 0.00 1.98
3751 12261 6.599244 TGAGGCATTTTACTGTCAGGAATTAG 59.401 38.462 4.53 0.00 0.00 1.73
3753 12263 5.183904 GTGAGGCATTTTACTGTCAGGAATT 59.816 40.000 4.53 0.00 0.00 2.17
3756 12266 3.072330 TGTGAGGCATTTTACTGTCAGGA 59.928 43.478 4.53 0.00 0.00 3.86
3758 12268 5.437289 TTTGTGAGGCATTTTACTGTCAG 57.563 39.130 0.00 0.00 0.00 3.51
3766 12276 9.019656 TGTGTTACTATATTTGTGAGGCATTTT 57.980 29.630 0.00 0.00 0.00 1.82
3769 12279 7.829211 AGTTGTGTTACTATATTTGTGAGGCAT 59.171 33.333 0.00 0.00 0.00 4.40
3770 12280 7.165485 AGTTGTGTTACTATATTTGTGAGGCA 58.835 34.615 0.00 0.00 0.00 4.75
3771 12281 7.611213 AGTTGTGTTACTATATTTGTGAGGC 57.389 36.000 0.00 0.00 0.00 4.70
3784 12294 8.968969 TGGTAACCAAATTTTAGTTGTGTTACT 58.031 29.630 18.82 0.00 39.46 2.24
3785 12295 9.752961 ATGGTAACCAAATTTTAGTTGTGTTAC 57.247 29.630 11.81 15.15 39.19 2.50
3789 12299 8.868916 GCATATGGTAACCAAATTTTAGTTGTG 58.131 33.333 4.56 4.81 36.95 3.33
3790 12300 8.589338 TGCATATGGTAACCAAATTTTAGTTGT 58.411 29.630 4.56 1.73 36.95 3.32
3791 12301 8.994429 TGCATATGGTAACCAAATTTTAGTTG 57.006 30.769 4.56 0.00 36.95 3.16
3792 12302 9.598517 CATGCATATGGTAACCAAATTTTAGTT 57.401 29.630 0.00 8.12 36.95 2.24
3797 12307 8.072321 TGTACATGCATATGGTAACCAAATTT 57.928 30.769 0.00 0.00 36.95 1.82
3799 12309 7.255906 CCATGTACATGCATATGGTAACCAAAT 60.256 37.037 27.27 0.00 38.66 2.32
3801 12311 5.534278 CCATGTACATGCATATGGTAACCAA 59.466 40.000 27.27 0.00 38.66 3.67
3804 12314 4.761739 AGCCATGTACATGCATATGGTAAC 59.238 41.667 27.27 9.87 41.62 2.50
3805 12315 4.984295 AGCCATGTACATGCATATGGTAA 58.016 39.130 27.27 4.77 41.62 2.85
3808 12343 4.321452 GGAAAGCCATGTACATGCATATGG 60.321 45.833 27.27 18.28 42.30 2.74
3824 12359 6.599638 AGAACAAGATGTAGTAATGGAAAGCC 59.400 38.462 0.00 0.00 0.00 4.35
3834 12369 7.067129 AGCGTCATTAGAGAACAAGATGTAGTA 59.933 37.037 0.00 0.00 0.00 1.82
3835 12370 6.037098 GCGTCATTAGAGAACAAGATGTAGT 58.963 40.000 0.00 0.00 0.00 2.73
3836 12371 6.269315 AGCGTCATTAGAGAACAAGATGTAG 58.731 40.000 0.00 0.00 0.00 2.74
3837 12372 6.127730 TGAGCGTCATTAGAGAACAAGATGTA 60.128 38.462 0.00 0.00 0.00 2.29
3838 12373 5.078411 AGCGTCATTAGAGAACAAGATGT 57.922 39.130 0.00 0.00 0.00 3.06
3840 12375 5.105554 AGTGAGCGTCATTAGAGAACAAGAT 60.106 40.000 0.00 0.00 0.00 2.40
3841 12376 4.218635 AGTGAGCGTCATTAGAGAACAAGA 59.781 41.667 0.00 0.00 0.00 3.02
3842 12377 4.489810 AGTGAGCGTCATTAGAGAACAAG 58.510 43.478 0.00 0.00 0.00 3.16
3844 12379 4.521130 AAGTGAGCGTCATTAGAGAACA 57.479 40.909 0.00 0.00 0.00 3.18
3845 12380 6.019479 CCATAAAGTGAGCGTCATTAGAGAAC 60.019 42.308 0.00 0.00 0.00 3.01
3846 12381 6.042777 CCATAAAGTGAGCGTCATTAGAGAA 58.957 40.000 0.00 0.00 0.00 2.87
3847 12382 5.127194 ACCATAAAGTGAGCGTCATTAGAGA 59.873 40.000 0.00 0.00 0.00 3.10
3849 12384 5.109210 CACCATAAAGTGAGCGTCATTAGA 58.891 41.667 0.00 0.00 40.34 2.10
3850 12385 4.271049 CCACCATAAAGTGAGCGTCATTAG 59.729 45.833 0.00 0.00 40.34 1.73
3851 12386 4.081365 TCCACCATAAAGTGAGCGTCATTA 60.081 41.667 0.00 0.00 40.34 1.90
3852 12387 3.009723 CCACCATAAAGTGAGCGTCATT 58.990 45.455 0.00 0.00 40.34 2.57
3853 12388 2.236146 TCCACCATAAAGTGAGCGTCAT 59.764 45.455 0.00 0.00 40.34 3.06
3855 12390 2.000447 GTCCACCATAAAGTGAGCGTC 59.000 52.381 0.00 0.00 40.34 5.19
3857 12392 2.002586 CAGTCCACCATAAAGTGAGCG 58.997 52.381 0.00 0.00 40.34 5.03
3860 12395 2.552155 GCACCAGTCCACCATAAAGTGA 60.552 50.000 0.00 0.00 40.34 3.41
3861 12396 1.812571 GCACCAGTCCACCATAAAGTG 59.187 52.381 0.00 0.00 37.51 3.16
3862 12397 1.610624 CGCACCAGTCCACCATAAAGT 60.611 52.381 0.00 0.00 0.00 2.66
3863 12398 1.086696 CGCACCAGTCCACCATAAAG 58.913 55.000 0.00 0.00 0.00 1.85
3865 12400 0.321210 CACGCACCAGTCCACCATAA 60.321 55.000 0.00 0.00 0.00 1.90
3867 12402 2.032528 CACGCACCAGTCCACCAT 59.967 61.111 0.00 0.00 0.00 3.55
3868 12403 4.248842 CCACGCACCAGTCCACCA 62.249 66.667 0.00 0.00 0.00 4.17
3872 12407 2.798148 CTAACCCCACGCACCAGTCC 62.798 65.000 0.00 0.00 0.00 3.85
3873 12408 1.375523 CTAACCCCACGCACCAGTC 60.376 63.158 0.00 0.00 0.00 3.51
3875 12410 1.079127 CTCTAACCCCACGCACCAG 60.079 63.158 0.00 0.00 0.00 4.00
3877 12412 2.267961 CCTCTAACCCCACGCACC 59.732 66.667 0.00 0.00 0.00 5.01
3878 12413 1.375523 CACCTCTAACCCCACGCAC 60.376 63.158 0.00 0.00 0.00 5.34
3881 12416 1.375523 GCACACCTCTAACCCCACG 60.376 63.158 0.00 0.00 0.00 4.94
3882 12417 0.328258 ATGCACACCTCTAACCCCAC 59.672 55.000 0.00 0.00 0.00 4.61
3884 12419 1.838077 AGTATGCACACCTCTAACCCC 59.162 52.381 0.00 0.00 0.00 4.95
3885 12420 3.270877 CAAGTATGCACACCTCTAACCC 58.729 50.000 0.00 0.00 0.00 4.11
3886 12421 3.939066 ACAAGTATGCACACCTCTAACC 58.061 45.455 0.00 0.00 0.00 2.85
3887 12422 4.154195 CCAACAAGTATGCACACCTCTAAC 59.846 45.833 0.00 0.00 0.00 2.34
3888 12423 4.323417 CCAACAAGTATGCACACCTCTAA 58.677 43.478 0.00 0.00 0.00 2.10
3890 12425 2.553028 CCCAACAAGTATGCACACCTCT 60.553 50.000 0.00 0.00 0.00 3.69
3891 12426 1.812571 CCCAACAAGTATGCACACCTC 59.187 52.381 0.00 0.00 0.00 3.85
3892 12427 1.423541 TCCCAACAAGTATGCACACCT 59.576 47.619 0.00 0.00 0.00 4.00
3893 12428 1.904287 TCCCAACAAGTATGCACACC 58.096 50.000 0.00 0.00 0.00 4.16
3894 12429 2.884639 ACTTCCCAACAAGTATGCACAC 59.115 45.455 0.00 0.00 34.70 3.82
3895 12430 2.884012 CACTTCCCAACAAGTATGCACA 59.116 45.455 0.00 0.00 34.70 4.57
3898 12433 2.162681 AGCACTTCCCAACAAGTATGC 58.837 47.619 0.00 0.00 34.70 3.14
3899 12434 6.515272 AATTAGCACTTCCCAACAAGTATG 57.485 37.500 0.00 0.00 34.70 2.39
3900 12435 6.602009 GGTAATTAGCACTTCCCAACAAGTAT 59.398 38.462 9.77 0.00 34.70 2.12
3902 12437 4.765339 GGTAATTAGCACTTCCCAACAAGT 59.235 41.667 9.77 0.00 37.05 3.16
3906 12441 7.582667 AATATGGTAATTAGCACTTCCCAAC 57.417 36.000 19.03 0.00 36.42 3.77
3907 12442 8.602472 AAAATATGGTAATTAGCACTTCCCAA 57.398 30.769 19.03 0.00 36.42 4.12
3913 12448 9.014297 GCTATGGAAAATATGGTAATTAGCACT 57.986 33.333 19.03 11.06 36.42 4.40
3914 12449 9.014297 AGCTATGGAAAATATGGTAATTAGCAC 57.986 33.333 19.03 5.91 36.42 4.40
3915 12450 9.586732 AAGCTATGGAAAATATGGTAATTAGCA 57.413 29.630 18.95 18.95 38.16 3.49
3920 12455 9.875708 TGGTAAAGCTATGGAAAATATGGTAAT 57.124 29.630 0.00 0.00 0.00 1.89
3921 12456 9.875708 ATGGTAAAGCTATGGAAAATATGGTAA 57.124 29.630 0.00 0.00 0.00 2.85
3927 12635 7.996066 TGTAGCATGGTAAAGCTATGGAAAATA 59.004 33.333 6.12 0.00 44.32 1.40
3935 12644 7.880160 TCAATTTGTAGCATGGTAAAGCTAT 57.120 32.000 6.12 0.00 44.32 2.97
3937 12646 6.209391 AGTTCAATTTGTAGCATGGTAAAGCT 59.791 34.615 6.12 0.00 44.55 3.74
3939 12648 7.968405 GGTAGTTCAATTTGTAGCATGGTAAAG 59.032 37.037 6.12 0.00 0.00 1.85
3940 12649 7.448777 TGGTAGTTCAATTTGTAGCATGGTAAA 59.551 33.333 6.12 0.00 0.00 2.01
3942 12651 6.373216 GTGGTAGTTCAATTTGTAGCATGGTA 59.627 38.462 0.00 0.00 0.00 3.25
3944 12653 5.415701 AGTGGTAGTTCAATTTGTAGCATGG 59.584 40.000 0.00 0.00 0.00 3.66
3951 13198 9.520515 AGATGAATTAGTGGTAGTTCAATTTGT 57.479 29.630 0.00 0.00 38.11 2.83
3958 13205 6.758886 CACCTCAGATGAATTAGTGGTAGTTC 59.241 42.308 0.00 0.00 0.00 3.01
3960 13207 5.129485 CCACCTCAGATGAATTAGTGGTAGT 59.871 44.000 10.57 0.00 38.75 2.73
3964 13211 4.494091 ACCACCTCAGATGAATTAGTGG 57.506 45.455 14.60 14.60 46.87 4.00
3965 13212 6.037610 GCTTTACCACCTCAGATGAATTAGTG 59.962 42.308 0.00 0.00 0.00 2.74
3966 13213 6.116126 GCTTTACCACCTCAGATGAATTAGT 58.884 40.000 0.00 0.00 0.00 2.24
3967 13214 5.235186 CGCTTTACCACCTCAGATGAATTAG 59.765 44.000 0.00 0.00 0.00 1.73
3968 13215 5.116180 CGCTTTACCACCTCAGATGAATTA 58.884 41.667 0.00 0.00 0.00 1.40
3969 13216 3.941483 CGCTTTACCACCTCAGATGAATT 59.059 43.478 0.00 0.00 0.00 2.17
3970 13217 3.055094 ACGCTTTACCACCTCAGATGAAT 60.055 43.478 0.00 0.00 0.00 2.57
3971 13218 2.301870 ACGCTTTACCACCTCAGATGAA 59.698 45.455 0.00 0.00 0.00 2.57
3973 13220 2.386661 ACGCTTTACCACCTCAGATG 57.613 50.000 0.00 0.00 0.00 2.90
3974 13221 3.858247 GTAACGCTTTACCACCTCAGAT 58.142 45.455 1.72 0.00 32.71 2.90
3984 13231 5.292834 GGTAGAGGAAATGGTAACGCTTTAC 59.707 44.000 4.57 4.57 42.51 2.01
3986 13233 4.019591 AGGTAGAGGAAATGGTAACGCTTT 60.020 41.667 0.00 0.00 42.51 3.51
3987 13234 3.518303 AGGTAGAGGAAATGGTAACGCTT 59.482 43.478 0.00 0.00 42.51 4.68
3988 13235 3.105283 AGGTAGAGGAAATGGTAACGCT 58.895 45.455 0.00 0.00 42.51 5.07
3992 13239 7.767198 CGATAAAACAGGTAGAGGAAATGGTAA 59.233 37.037 0.00 0.00 0.00 2.85
3993 13240 7.270047 CGATAAAACAGGTAGAGGAAATGGTA 58.730 38.462 0.00 0.00 0.00 3.25
3994 13241 6.113411 CGATAAAACAGGTAGAGGAAATGGT 58.887 40.000 0.00 0.00 0.00 3.55
3995 13242 5.007724 GCGATAAAACAGGTAGAGGAAATGG 59.992 44.000 0.00 0.00 0.00 3.16
3996 13243 5.007724 GGCGATAAAACAGGTAGAGGAAATG 59.992 44.000 0.00 0.00 0.00 2.32
3998 13245 4.020039 TGGCGATAAAACAGGTAGAGGAAA 60.020 41.667 0.00 0.00 0.00 3.13
3999 13246 3.516300 TGGCGATAAAACAGGTAGAGGAA 59.484 43.478 0.00 0.00 0.00 3.36
4001 13248 3.536956 TGGCGATAAAACAGGTAGAGG 57.463 47.619 0.00 0.00 0.00 3.69
4002 13249 7.730364 ATTATTGGCGATAAAACAGGTAGAG 57.270 36.000 11.10 0.00 34.06 2.43
4005 13252 7.499563 TGCTAATTATTGGCGATAAAACAGGTA 59.500 33.333 11.10 0.00 40.39 3.08
4006 13253 6.320164 TGCTAATTATTGGCGATAAAACAGGT 59.680 34.615 11.10 0.00 40.39 4.00
4008 13255 6.360681 GCTGCTAATTATTGGCGATAAAACAG 59.639 38.462 11.10 14.78 40.39 3.16
4009 13256 6.205784 GCTGCTAATTATTGGCGATAAAACA 58.794 36.000 11.10 6.60 40.39 2.83
4010 13257 5.339611 CGCTGCTAATTATTGGCGATAAAAC 59.660 40.000 11.10 2.73 44.36 2.43
4011 13258 5.448438 CGCTGCTAATTATTGGCGATAAAA 58.552 37.500 11.10 2.65 44.36 1.52
4012 13259 4.083537 CCGCTGCTAATTATTGGCGATAAA 60.084 41.667 20.00 0.00 44.36 1.40
4013 13260 3.435327 CCGCTGCTAATTATTGGCGATAA 59.565 43.478 20.00 9.56 44.36 1.75
4014 13261 3.000041 CCGCTGCTAATTATTGGCGATA 59.000 45.455 20.00 0.00 44.36 2.92
4015 13262 1.806542 CCGCTGCTAATTATTGGCGAT 59.193 47.619 20.00 0.00 44.36 4.58
4017 13264 0.385974 GCCGCTGCTAATTATTGGCG 60.386 55.000 8.66 14.73 40.39 5.69
4018 13265 0.667993 TGCCGCTGCTAATTATTGGC 59.332 50.000 6.34 6.34 41.33 4.52
4019 13266 1.949525 ACTGCCGCTGCTAATTATTGG 59.050 47.619 0.70 0.00 38.71 3.16
4020 13267 4.715896 CATACTGCCGCTGCTAATTATTG 58.284 43.478 0.70 0.00 38.71 1.90
4022 13269 2.744202 GCATACTGCCGCTGCTAATTAT 59.256 45.455 0.70 0.00 37.42 1.28
4026 13273 1.882625 CGCATACTGCCGCTGCTAA 60.883 57.895 0.70 0.00 41.12 3.09
4030 13277 4.529219 TCCCGCATACTGCCGCTG 62.529 66.667 0.00 0.00 41.12 5.18
4031 13278 4.530857 GTCCCGCATACTGCCGCT 62.531 66.667 0.00 0.00 41.12 5.52
4034 13281 3.379865 TTCCGTCCCGCATACTGCC 62.380 63.158 0.00 0.00 41.12 4.85
4035 13282 1.883084 CTTCCGTCCCGCATACTGC 60.883 63.158 0.00 0.00 40.69 4.40
4036 13283 0.108329 AACTTCCGTCCCGCATACTG 60.108 55.000 0.00 0.00 0.00 2.74
4037 13284 1.477553 TAACTTCCGTCCCGCATACT 58.522 50.000 0.00 0.00 0.00 2.12
4038 13285 1.929169 GTTAACTTCCGTCCCGCATAC 59.071 52.381 0.00 0.00 0.00 2.39
4039 13286 1.134729 GGTTAACTTCCGTCCCGCATA 60.135 52.381 5.42 0.00 0.00 3.14
4040 13287 0.392060 GGTTAACTTCCGTCCCGCAT 60.392 55.000 5.42 0.00 0.00 4.73
4041 13288 1.004679 GGTTAACTTCCGTCCCGCA 60.005 57.895 5.42 0.00 0.00 5.69
4043 13290 1.648504 GATGGTTAACTTCCGTCCCG 58.351 55.000 5.42 0.00 35.59 5.14
4044 13291 1.205417 TCGATGGTTAACTTCCGTCCC 59.795 52.381 5.42 0.00 37.62 4.46
4045 13292 2.537401 CTCGATGGTTAACTTCCGTCC 58.463 52.381 5.42 0.00 37.62 4.79
4046 13293 2.537401 CCTCGATGGTTAACTTCCGTC 58.463 52.381 5.42 0.00 37.56 4.79
4047 13294 1.206371 CCCTCGATGGTTAACTTCCGT 59.794 52.381 5.42 0.00 0.00 4.69
4049 13296 3.467803 CATCCCTCGATGGTTAACTTCC 58.532 50.000 6.63 0.00 41.99 3.46
4059 13306 5.308014 TGATTTCATTACCATCCCTCGATG 58.692 41.667 0.00 0.00 44.80 3.84
4060 13307 5.567037 TGATTTCATTACCATCCCTCGAT 57.433 39.130 0.00 0.00 0.00 3.59
4061 13308 5.366482 TTGATTTCATTACCATCCCTCGA 57.634 39.130 0.00 0.00 0.00 4.04
4062 13309 6.441274 CATTTGATTTCATTACCATCCCTCG 58.559 40.000 0.00 0.00 0.00 4.63
4063 13310 6.183360 TGCATTTGATTTCATTACCATCCCTC 60.183 38.462 0.00 0.00 0.00 4.30
4065 13312 5.916318 TGCATTTGATTTCATTACCATCCC 58.084 37.500 0.00 0.00 0.00 3.85
4066 13313 8.981647 GTAATGCATTTGATTTCATTACCATCC 58.018 33.333 18.75 0.00 42.27 3.51
4067 13314 9.754382 AGTAATGCATTTGATTTCATTACCATC 57.246 29.630 18.75 0.00 45.96 3.51
4098 13430 9.765795 AATCACGAAGGTAAAATCCTATAGAAG 57.234 33.333 0.00 0.00 36.74 2.85
4102 13434 7.811236 CGCTAATCACGAAGGTAAAATCCTATA 59.189 37.037 0.00 0.00 36.74 1.31
4103 13435 6.645415 CGCTAATCACGAAGGTAAAATCCTAT 59.355 38.462 0.00 0.00 36.74 2.57
4106 13438 4.025145 CCGCTAATCACGAAGGTAAAATCC 60.025 45.833 0.00 0.00 0.00 3.01
4108 13440 4.331717 CACCGCTAATCACGAAGGTAAAAT 59.668 41.667 0.00 0.00 0.00 1.82
4115 13447 1.134367 TCCTCACCGCTAATCACGAAG 59.866 52.381 0.00 0.00 0.00 3.79
4118 13450 0.249073 CCTCCTCACCGCTAATCACG 60.249 60.000 0.00 0.00 0.00 4.35
4121 13453 0.389757 GGACCTCCTCACCGCTAATC 59.610 60.000 0.00 0.00 0.00 1.75
4144 13476 3.528370 CTGGTCCTAGGCGGGTCG 61.528 72.222 2.96 0.00 0.00 4.79
4145 13477 3.851128 GCTGGTCCTAGGCGGGTC 61.851 72.222 2.96 0.00 0.00 4.46
4152 13484 0.598562 ATCGTATGCGCTGGTCCTAG 59.401 55.000 9.73 0.00 38.14 3.02
4153 13485 1.900245 TATCGTATGCGCTGGTCCTA 58.100 50.000 9.73 0.00 38.14 2.94
4154 13486 1.257743 ATATCGTATGCGCTGGTCCT 58.742 50.000 9.73 0.00 38.14 3.85
4155 13487 2.933495 TATATCGTATGCGCTGGTCC 57.067 50.000 9.73 0.00 38.14 4.46
4156 13488 7.435488 AGAAAATATATATCGTATGCGCTGGTC 59.565 37.037 9.73 0.00 38.14 4.02
4157 13489 7.265673 AGAAAATATATATCGTATGCGCTGGT 58.734 34.615 9.73 0.00 38.14 4.00
4158 13490 7.700322 AGAAAATATATATCGTATGCGCTGG 57.300 36.000 9.73 0.00 38.14 4.85
4181 13513 4.243270 ACGACGGAAAAAGAGACCATAAG 58.757 43.478 0.00 0.00 0.00 1.73
4185 13517 3.731652 TTACGACGGAAAAAGAGACCA 57.268 42.857 0.00 0.00 0.00 4.02
4197 13529 9.217223 CCATAAATTTTGTCTTATTTACGACGG 57.783 33.333 0.00 0.00 31.21 4.79
4240 13572 2.033550 CCGAGTGAGAAGTCCGGAATAG 59.966 54.545 5.23 0.00 42.49 1.73
4261 13593 2.668550 GGCAGGTTGGTGGACGAC 60.669 66.667 0.00 0.00 0.00 4.34
4346 13686 2.898738 AGCACCGCTCCAGAGATG 59.101 61.111 0.00 0.00 30.62 2.90
4358 13698 4.035675 GCTACAATGACAATTAGGAGCACC 59.964 45.833 0.00 0.00 33.98 5.01
4382 13722 3.908081 CGTACATACCGGCCGGCT 61.908 66.667 43.58 30.71 39.32 5.52
4602 14032 1.966762 CCGGCATTGACTTGGCTTT 59.033 52.632 0.00 0.00 39.86 3.51
4791 14225 2.487805 GCTGGGATAACTGCATCATGGA 60.488 50.000 0.00 0.00 35.65 3.41
4924 14898 7.979115 TTGTGCAAGTACAAAAACTTCATAC 57.021 32.000 1.16 0.00 37.61 2.39
4934 14908 7.276658 CCAAAATACAGTTTGTGCAAGTACAAA 59.723 33.333 11.54 11.54 45.41 2.83
4937 14911 6.416750 GTCCAAAATACAGTTTGTGCAAGTAC 59.583 38.462 0.00 0.00 36.87 2.73
4940 14914 4.440758 CGTCCAAAATACAGTTTGTGCAAG 59.559 41.667 0.00 0.00 36.87 4.01
4941 14915 4.096532 TCGTCCAAAATACAGTTTGTGCAA 59.903 37.500 0.00 0.00 36.87 4.08
4942 14916 3.628032 TCGTCCAAAATACAGTTTGTGCA 59.372 39.130 1.98 0.00 36.87 4.57
4943 14917 4.217754 TCGTCCAAAATACAGTTTGTGC 57.782 40.909 1.98 0.00 36.87 4.57
4944 14918 4.274950 ACCTCGTCCAAAATACAGTTTGTG 59.725 41.667 1.98 0.00 36.87 3.33
4945 14919 4.457466 ACCTCGTCCAAAATACAGTTTGT 58.543 39.130 1.98 0.00 36.87 2.83
4946 14920 5.432885 AACCTCGTCCAAAATACAGTTTG 57.567 39.130 0.00 0.00 38.07 2.93
4947 14921 5.471116 GGTAACCTCGTCCAAAATACAGTTT 59.529 40.000 0.00 0.00 0.00 2.66
4948 14922 4.999311 GGTAACCTCGTCCAAAATACAGTT 59.001 41.667 0.00 0.00 0.00 3.16
4949 14923 4.572909 GGTAACCTCGTCCAAAATACAGT 58.427 43.478 0.00 0.00 0.00 3.55
4966 14940 4.462280 CGACCGGGCAGGGGTAAC 62.462 72.222 8.76 0.00 46.96 2.50
5082 15133 1.105759 GCCTCCATGCATCACTTCCC 61.106 60.000 0.00 0.00 0.00 3.97
5088 15139 2.190313 GACGGCCTCCATGCATCA 59.810 61.111 0.00 0.00 0.00 3.07
5199 15256 0.792640 GCGTGATGGATTATGCCTCG 59.207 55.000 0.00 0.00 0.00 4.63
5208 15265 1.895798 ACGATCTATGGCGTGATGGAT 59.104 47.619 0.00 0.00 39.56 3.41
5267 15324 4.379143 CACGCACGAGACGGACGA 62.379 66.667 12.92 0.00 34.47 4.20
5275 15332 3.827784 GTAGCACGCACGCACGAG 61.828 66.667 4.54 0.00 36.70 4.18
5276 15333 4.632458 TGTAGCACGCACGCACGA 62.632 61.111 4.54 0.00 36.70 4.35
5277 15334 4.121227 CTGTAGCACGCACGCACG 62.121 66.667 0.00 0.00 39.50 5.34
5355 21704 1.548357 ATCTGCTCCAGCGACTTGGT 61.548 55.000 0.00 0.00 45.83 3.67
5444 21805 6.045072 AGTTAGGTTACAATCATCCGAACA 57.955 37.500 0.00 0.00 37.79 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.