Multiple sequence alignment - TraesCS7D01G469100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G469100 chr7D 100.000 5681 0 0 1 5681 582309780 582304100 0.000000e+00 10491.0
1 TraesCS7D01G469100 chr7D 90.984 244 21 1 5178 5421 393625085 393624843 1.530000e-85 327.0
2 TraesCS7D01G469100 chr7D 79.389 131 21 4 4295 4424 111081938 111082063 2.820000e-13 87.9
3 TraesCS7D01G469100 chr7B 93.105 3626 150 42 482 4088 650137217 650133673 0.000000e+00 5219.0
4 TraesCS7D01G469100 chr7B 87.925 588 42 8 4505 5075 650131009 650130434 0.000000e+00 665.0
5 TraesCS7D01G469100 chr7B 94.357 319 11 3 4087 4405 650133549 650133238 3.080000e-132 483.0
6 TraesCS7D01G469100 chr7A 92.567 2610 96 37 2618 5183 674279153 674276598 0.000000e+00 3655.0
7 TraesCS7D01G469100 chr7A 94.555 1157 60 3 1420 2574 674280311 674279156 0.000000e+00 1784.0
8 TraesCS7D01G469100 chr7A 85.176 769 53 24 539 1289 674281081 674280356 0.000000e+00 732.0
9 TraesCS7D01G469100 chr7A 83.831 569 54 20 1 553 674281713 674281167 1.830000e-139 507.0
10 TraesCS7D01G469100 chr7A 91.736 242 20 0 5180 5421 218936186 218936427 2.540000e-88 337.0
11 TraesCS7D01G469100 chr1D 92.518 548 40 1 2061 2608 473029065 473028519 0.000000e+00 784.0
12 TraesCS7D01G469100 chr1D 88.525 61 3 3 4345 4404 208416484 208416427 2.840000e-08 71.3
13 TraesCS7D01G469100 chrUn 100.000 386 0 0 3131 3516 480575755 480576140 0.000000e+00 713.0
14 TraesCS7D01G469100 chrUn 92.094 468 33 3 2061 2528 379911745 379912208 0.000000e+00 656.0
15 TraesCS7D01G469100 chrUn 86.957 92 12 0 4895 4986 28682520 28682611 2.800000e-18 104.0
16 TraesCS7D01G469100 chr3B 92.308 468 32 3 2061 2528 124779102 124778639 0.000000e+00 662.0
17 TraesCS7D01G469100 chr3B 92.094 468 33 3 2061 2528 124778199 124777736 0.000000e+00 656.0
18 TraesCS7D01G469100 chr3B 91.880 468 34 3 2061 2528 124775975 124775512 0.000000e+00 651.0
19 TraesCS7D01G469100 chr1B 92.094 468 33 3 2061 2528 422552659 422553122 0.000000e+00 656.0
20 TraesCS7D01G469100 chr3A 90.441 272 24 1 2257 2528 696366924 696367193 1.950000e-94 357.0
21 TraesCS7D01G469100 chr3D 92.213 244 19 0 5178 5421 148251244 148251001 4.210000e-91 346.0
22 TraesCS7D01G469100 chr3D 90.164 244 22 2 5178 5421 4579090 4579331 3.300000e-82 316.0
23 TraesCS7D01G469100 chr3D 87.313 134 12 3 4276 4408 108291885 108291756 1.280000e-31 148.0
24 TraesCS7D01G469100 chr6A 91.358 243 19 2 5180 5421 606719577 606719818 1.180000e-86 331.0
25 TraesCS7D01G469100 chr4B 90.909 242 22 0 5180 5421 121191554 121191795 5.490000e-85 326.0
26 TraesCS7D01G469100 chr4B 81.982 111 16 3 4293 4402 43741189 43741296 2.180000e-14 91.6
27 TraesCS7D01G469100 chr6D 89.189 259 22 6 5165 5421 472139329 472139075 9.190000e-83 318.0
28 TraesCS7D01G469100 chr5D 90.164 244 22 2 5179 5421 557935623 557935381 3.300000e-82 316.0
29 TraesCS7D01G469100 chr5D 90.083 242 24 0 5180 5421 546697975 546697734 1.190000e-81 315.0
30 TraesCS7D01G469100 chr1A 94.156 154 9 0 2061 2214 22189167 22189014 9.520000e-58 235.0
31 TraesCS7D01G469100 chr1A 91.954 87 7 0 4898 4984 417400618 417400704 7.730000e-24 122.0
32 TraesCS7D01G469100 chr1A 91.954 87 7 0 4898 4984 425264027 425264113 7.730000e-24 122.0
33 TraesCS7D01G469100 chr1A 81.884 138 19 3 4293 4427 500975638 500975772 1.670000e-20 111.0
34 TraesCS7D01G469100 chr5A 91.667 96 7 1 4171 4266 596486048 596485954 1.280000e-26 132.0
35 TraesCS7D01G469100 chr5A 88.372 86 10 0 4898 4983 3613004 3613089 2.800000e-18 104.0
36 TraesCS7D01G469100 chr5A 82.906 117 15 4 4293 4408 669684751 669684863 3.620000e-17 100.0
37 TraesCS7D01G469100 chr5A 86.047 86 12 0 4898 4983 1342668 1342583 6.060000e-15 93.5
38 TraesCS7D01G469100 chr2A 83.761 117 14 3 4293 4408 778038851 778038963 7.780000e-19 106.0
39 TraesCS7D01G469100 chr5B 87.059 85 11 0 4898 4982 559679766 559679682 4.690000e-16 97.1
40 TraesCS7D01G469100 chr2B 87.209 86 10 1 4899 4983 200567953 200568038 4.690000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G469100 chr7D 582304100 582309780 5680 True 10491.000000 10491 100.000000 1 5681 1 chr7D.!!$R2 5680
1 TraesCS7D01G469100 chr7B 650130434 650137217 6783 True 2122.333333 5219 91.795667 482 5075 3 chr7B.!!$R1 4593
2 TraesCS7D01G469100 chr7A 674276598 674281713 5115 True 1669.500000 3655 89.032250 1 5183 4 chr7A.!!$R1 5182
3 TraesCS7D01G469100 chr1D 473028519 473029065 546 True 784.000000 784 92.518000 2061 2608 1 chr1D.!!$R2 547
4 TraesCS7D01G469100 chr3B 124775512 124779102 3590 True 656.333333 662 92.094000 2061 2528 3 chr3B.!!$R1 467

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
329 346 0.106918 AAGAAACAACTCCACGGGCA 60.107 50.000 0.00 0.00 0.00 5.36 F
1186 1329 0.174845 TGGATGTGGTGCGCTACTAC 59.825 55.000 15.15 13.67 40.83 2.73 F
1508 1656 0.321653 CCTGTTCTAGTGGTGTGGCC 60.322 60.000 0.00 0.00 37.90 5.36 F
2044 2195 0.534203 TCGTCTTTGTCCCAGTTGGC 60.534 55.000 0.00 0.00 0.00 4.52 F
2719 3913 1.009078 TGAAGAGCCGAAATGATGCG 58.991 50.000 0.00 0.00 0.00 4.73 F
3861 5597 1.202842 CCCGTGGGAACTACTTTGGTT 60.203 52.381 0.00 0.00 37.50 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1795 1945 0.178995 TGCATGCCAGAAACACAGGA 60.179 50.000 16.68 0.0 0.00 3.86 R
2803 3997 1.808945 CTCCAAGCAATCAGACCACAC 59.191 52.381 0.00 0.0 0.00 3.82 R
3084 4278 4.398044 AGAACTCAAACGAACCATTGTTGT 59.602 37.500 0.00 0.0 33.31 3.32 R
3522 4716 2.093973 AGGTACACATCAGCAGTAGCAC 60.094 50.000 0.00 0.0 45.49 4.40 R
4316 6180 1.067142 TCTAACGGATGCGAGCAGTTT 60.067 47.619 15.49 0.0 0.00 2.66 R
5500 9523 0.025898 CTGAATCGACGCAGCACATG 59.974 55.000 3.72 0.0 0.00 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 81 0.180171 TTTCGCATCATCCGTCCCAT 59.820 50.000 0.00 0.00 0.00 4.00
85 88 1.521457 CATCCGTCCCATCACACCG 60.521 63.158 0.00 0.00 0.00 4.94
103 106 4.116961 CACCGATCTACGCCAAGATAAAA 58.883 43.478 0.00 0.00 36.33 1.52
104 107 4.209288 CACCGATCTACGCCAAGATAAAAG 59.791 45.833 0.00 0.00 36.33 2.27
106 109 4.681942 CCGATCTACGCCAAGATAAAAGAG 59.318 45.833 0.00 0.00 36.33 2.85
108 111 5.174035 CGATCTACGCCAAGATAAAAGAGTG 59.826 44.000 0.00 0.00 36.33 3.51
109 112 4.181578 TCTACGCCAAGATAAAAGAGTGC 58.818 43.478 0.00 0.00 0.00 4.40
110 113 2.778299 ACGCCAAGATAAAAGAGTGCA 58.222 42.857 0.00 0.00 0.00 4.57
162 165 3.820557 GGTCTTGCCTAGAATTGCCATA 58.179 45.455 0.00 0.00 33.81 2.74
179 182 6.291648 TGCCATAAAAATGCACTCCATTAA 57.708 33.333 0.00 0.00 43.22 1.40
182 185 7.495279 TGCCATAAAAATGCACTCCATTAATTC 59.505 33.333 0.00 0.00 43.22 2.17
192 195 5.699143 CACTCCATTAATTCATCCCTCCTT 58.301 41.667 0.00 0.00 0.00 3.36
193 196 6.131961 CACTCCATTAATTCATCCCTCCTTT 58.868 40.000 0.00 0.00 0.00 3.11
194 197 6.040166 CACTCCATTAATTCATCCCTCCTTTG 59.960 42.308 0.00 0.00 0.00 2.77
195 198 5.457686 TCCATTAATTCATCCCTCCTTTGG 58.542 41.667 0.00 0.00 0.00 3.28
213 223 9.771140 CTCCTTTGGGTAGTATAAGTATATCCT 57.229 37.037 0.00 0.00 0.00 3.24
244 254 4.001652 ACACGAGTAGAGTCGAATTCTCA 58.998 43.478 13.47 0.00 42.85 3.27
253 263 4.767928 AGAGTCGAATTCTCACACTAACCT 59.232 41.667 3.52 0.00 34.73 3.50
263 273 4.459685 TCTCACACTAACCTAAGAGCAGAC 59.540 45.833 0.00 0.00 0.00 3.51
287 301 8.259049 ACATGCCAAAATATTTTCATGTTCAG 57.741 30.769 26.87 13.86 40.05 3.02
329 346 0.106918 AAGAAACAACTCCACGGGCA 60.107 50.000 0.00 0.00 0.00 5.36
338 355 1.002624 TCCACGGGCAGACCAAATC 60.003 57.895 0.00 0.00 40.22 2.17
344 361 1.076705 GGCAGACCAAATCTCCCCC 60.077 63.158 0.00 0.00 34.41 5.40
348 365 1.073098 AGACCAAATCTCCCCCGTTT 58.927 50.000 0.00 0.00 28.16 3.60
349 366 1.004394 AGACCAAATCTCCCCCGTTTC 59.996 52.381 0.00 0.00 28.16 2.78
352 369 1.682087 CCAAATCTCCCCCGTTTCTCC 60.682 57.143 0.00 0.00 0.00 3.71
353 370 0.252197 AAATCTCCCCCGTTTCTCCG 59.748 55.000 0.00 0.00 0.00 4.63
362 379 2.981350 GTTTCTCCGCCGGGCAAA 60.981 61.111 20.71 8.99 0.00 3.68
363 380 2.034999 TTTCTCCGCCGGGCAAAT 59.965 55.556 20.71 0.00 0.00 2.32
378 395 5.183140 CCGGGCAAATTTTAGATCGGATAAT 59.817 40.000 0.00 0.00 38.64 1.28
385 402 9.655769 CAAATTTTAGATCGGATAATGTGTCTG 57.344 33.333 0.00 0.00 0.00 3.51
386 403 6.844696 TTTTAGATCGGATAATGTGTCTGC 57.155 37.500 0.00 0.00 0.00 4.26
389 406 3.389329 AGATCGGATAATGTGTCTGCCTT 59.611 43.478 0.00 0.00 0.00 4.35
394 411 0.331278 TAATGTGTCTGCCTTGGGGG 59.669 55.000 0.00 0.00 38.36 5.40
395 412 1.729267 AATGTGTCTGCCTTGGGGGT 61.729 55.000 0.00 0.00 37.43 4.95
396 413 1.729267 ATGTGTCTGCCTTGGGGGTT 61.729 55.000 0.00 0.00 37.43 4.11
397 414 1.152546 GTGTCTGCCTTGGGGGTTT 60.153 57.895 0.00 0.00 37.43 3.27
405 422 0.958822 CCTTGGGGGTTTTTGTCGAG 59.041 55.000 0.00 0.00 0.00 4.04
434 451 6.083630 GCAATCTTGCGAGTTTAACACAATA 58.916 36.000 0.00 0.00 45.11 1.90
436 453 6.795098 ATCTTGCGAGTTTAACACAATACA 57.205 33.333 0.00 0.00 0.00 2.29
437 454 6.223138 TCTTGCGAGTTTAACACAATACAG 57.777 37.500 0.00 0.00 0.00 2.74
439 456 6.649141 TCTTGCGAGTTTAACACAATACAGAT 59.351 34.615 0.00 0.00 0.00 2.90
440 457 6.795098 TGCGAGTTTAACACAATACAGATT 57.205 33.333 0.00 0.00 0.00 2.40
441 458 6.827641 TGCGAGTTTAACACAATACAGATTC 58.172 36.000 0.00 0.00 0.00 2.52
442 459 6.425417 TGCGAGTTTAACACAATACAGATTCA 59.575 34.615 0.00 0.00 0.00 2.57
443 460 6.955963 GCGAGTTTAACACAATACAGATTCAG 59.044 38.462 0.00 0.00 0.00 3.02
444 461 7.148639 GCGAGTTTAACACAATACAGATTCAGA 60.149 37.037 0.00 0.00 0.00 3.27
445 462 8.162880 CGAGTTTAACACAATACAGATTCAGAC 58.837 37.037 0.00 0.00 0.00 3.51
446 463 8.902540 AGTTTAACACAATACAGATTCAGACA 57.097 30.769 0.00 0.00 0.00 3.41
447 464 8.774586 AGTTTAACACAATACAGATTCAGACAC 58.225 33.333 0.00 0.00 0.00 3.67
448 465 8.556194 GTTTAACACAATACAGATTCAGACACA 58.444 33.333 0.00 0.00 0.00 3.72
449 466 6.545504 AACACAATACAGATTCAGACACAC 57.454 37.500 0.00 0.00 0.00 3.82
450 467 4.686091 ACACAATACAGATTCAGACACACG 59.314 41.667 0.00 0.00 0.00 4.49
451 468 3.679980 ACAATACAGATTCAGACACACGC 59.320 43.478 0.00 0.00 0.00 5.34
452 469 1.977188 TACAGATTCAGACACACGCG 58.023 50.000 3.53 3.53 0.00 6.01
453 470 0.667487 ACAGATTCAGACACACGCGG 60.667 55.000 12.47 1.27 0.00 6.46
454 471 0.388520 CAGATTCAGACACACGCGGA 60.389 55.000 12.47 0.00 0.00 5.54
455 472 0.317160 AGATTCAGACACACGCGGAA 59.683 50.000 12.47 2.12 0.00 4.30
456 473 1.066858 AGATTCAGACACACGCGGAAT 60.067 47.619 12.47 7.69 0.00 3.01
457 474 1.061131 GATTCAGACACACGCGGAATG 59.939 52.381 12.47 8.11 0.00 2.67
463 480 0.313672 ACACACGCGGAATGCAAAAT 59.686 45.000 12.47 0.00 46.97 1.82
524 541 4.880759 AGAAGCCATCTCGATCAGTAATG 58.119 43.478 0.00 0.00 30.46 1.90
548 664 1.213926 ACAGCTCATCAGAAATCCCCC 59.786 52.381 0.00 0.00 0.00 5.40
707 824 1.724929 CGTCTCGACACGGACACAC 60.725 63.158 5.22 0.00 36.07 3.82
762 882 2.781406 GTCCCTCCTCCTCCACCT 59.219 66.667 0.00 0.00 0.00 4.00
765 885 2.780693 CCTCCTCCTCCACCTCCA 59.219 66.667 0.00 0.00 0.00 3.86
766 886 1.316266 CCTCCTCCTCCACCTCCAT 59.684 63.158 0.00 0.00 0.00 3.41
771 891 2.263099 CTCCTCCACCTCCATCCCCT 62.263 65.000 0.00 0.00 0.00 4.79
776 896 1.619363 CACCTCCATCCCCTTCCCA 60.619 63.158 0.00 0.00 0.00 4.37
777 897 0.995675 CACCTCCATCCCCTTCCCAT 60.996 60.000 0.00 0.00 0.00 4.00
778 898 0.699231 ACCTCCATCCCCTTCCCATC 60.699 60.000 0.00 0.00 0.00 3.51
838 958 3.803162 GCAAGCTCCCTCCCTCCC 61.803 72.222 0.00 0.00 0.00 4.30
839 959 2.041928 CAAGCTCCCTCCCTCCCT 59.958 66.667 0.00 0.00 0.00 4.20
840 960 1.617839 CAAGCTCCCTCCCTCCCTT 60.618 63.158 0.00 0.00 0.00 3.95
841 961 1.307430 AAGCTCCCTCCCTCCCTTC 60.307 63.158 0.00 0.00 0.00 3.46
907 1027 2.123425 CCTCCCTCCCCGAATCGA 60.123 66.667 3.36 0.00 0.00 3.59
956 1089 3.802418 CTCGCGGGGTTTATCGGGG 62.802 68.421 6.13 0.00 39.32 5.73
1015 1148 1.451504 GGGATGATGATGGACGGCA 59.548 57.895 0.00 0.00 0.00 5.69
1140 1283 3.582998 TTCTTCCCCTGCTTGATATGG 57.417 47.619 0.00 0.00 0.00 2.74
1178 1321 0.965363 AACCGGAATGGATGTGGTGC 60.965 55.000 9.46 0.00 42.00 5.01
1185 1328 1.119684 ATGGATGTGGTGCGCTACTA 58.880 50.000 15.15 0.00 0.00 1.82
1186 1329 0.174845 TGGATGTGGTGCGCTACTAC 59.825 55.000 15.15 13.67 40.83 2.73
1250 1398 3.207669 GGCTCGGGATGCTTGCTG 61.208 66.667 0.00 0.00 0.00 4.41
1311 1459 5.413523 GGGATAGTAGCTTAGCTCTGTACTC 59.586 48.000 11.09 1.64 40.44 2.59
1312 1460 6.235664 GGATAGTAGCTTAGCTCTGTACTCT 58.764 44.000 11.09 0.93 40.44 3.24
1330 1478 2.233922 CTCTCCTTGCTAAGAACCGGAA 59.766 50.000 9.46 0.00 0.00 4.30
1335 1483 3.933332 CCTTGCTAAGAACCGGAACTTAG 59.067 47.826 29.38 29.38 44.57 2.18
1344 1492 1.823610 ACCGGAACTTAGCCTAGTGAC 59.176 52.381 9.46 0.00 0.00 3.67
1346 1494 2.159226 CCGGAACTTAGCCTAGTGACTG 60.159 54.545 0.00 0.00 0.00 3.51
1350 1498 4.705991 GGAACTTAGCCTAGTGACTGTAGT 59.294 45.833 0.00 0.00 0.00 2.73
1366 1514 7.170320 GTGACTGTAGTTCGTTTTATCCAGAAA 59.830 37.037 0.00 0.00 0.00 2.52
1367 1515 7.711772 TGACTGTAGTTCGTTTTATCCAGAAAA 59.288 33.333 0.00 0.00 0.00 2.29
1401 1549 7.649057 TCGGTCTATTGTCTAGTTACATGATG 58.351 38.462 0.00 0.00 0.00 3.07
1441 1589 6.286240 TGTGTATGAGCTATGGATATCACC 57.714 41.667 4.83 0.00 0.00 4.02
1470 1618 1.209504 GGGATCGAAGTGTGGATGGAA 59.790 52.381 0.00 0.00 0.00 3.53
1476 1624 2.162208 CGAAGTGTGGATGGAATGGTTG 59.838 50.000 0.00 0.00 0.00 3.77
1508 1656 0.321653 CCTGTTCTAGTGGTGTGGCC 60.322 60.000 0.00 0.00 37.90 5.36
1528 1676 1.679680 CTATGTTTCTGGCATGCAGGG 59.320 52.381 21.36 8.69 0.00 4.45
1536 1684 1.152694 GGCATGCAGGGCAATCCTA 60.153 57.895 20.91 0.00 46.12 2.94
1547 1695 3.529319 AGGGCAATCCTAACTCCTGAATT 59.471 43.478 0.00 0.00 45.98 2.17
1562 1710 6.556495 ACTCCTGAATTCCTATGCTCAGATTA 59.444 38.462 2.27 0.00 38.02 1.75
1569 1717 9.547753 GAATTCCTATGCTCAGATTACAAGTTA 57.452 33.333 0.00 0.00 0.00 2.24
1639 1788 1.927895 CAGCCGAGCTTAACCTAGTG 58.072 55.000 0.00 0.00 36.40 2.74
1661 1811 7.155328 AGTGATTATAGCTGTTTAATCGAGGG 58.845 38.462 15.37 0.00 37.54 4.30
1670 1820 5.584253 TGTTTAATCGAGGGAGAAGAGAG 57.416 43.478 0.00 0.00 0.00 3.20
1672 1822 5.715279 TGTTTAATCGAGGGAGAAGAGAGAA 59.285 40.000 0.00 0.00 0.00 2.87
1694 1844 9.127277 GAGAATCTAGTGTCTAGTTACCTGATT 57.873 37.037 12.20 12.20 0.00 2.57
1731 1881 6.276091 TGTGTATGAGCAACAGATATCAGTC 58.724 40.000 5.32 0.00 0.00 3.51
2044 2195 0.534203 TCGTCTTTGTCCCAGTTGGC 60.534 55.000 0.00 0.00 0.00 4.52
2235 2390 4.249661 TGATAACAAGCTTGCGTACATCA 58.750 39.130 26.27 21.03 0.00 3.07
2300 2455 9.188588 ACGGTAATACATAACTGAACGATTATG 57.811 33.333 0.00 3.10 42.19 1.90
2344 3399 5.699001 AGTGAATAGAATTGTGTTGCGTGTA 59.301 36.000 0.00 0.00 0.00 2.90
2719 3913 1.009078 TGAAGAGCCGAAATGATGCG 58.991 50.000 0.00 0.00 0.00 4.73
2803 3997 4.236935 CTGATGGAAAACCAATTGTTCCG 58.763 43.478 17.05 4.16 43.21 4.30
2839 4033 4.982295 GCTTGGAGTTTGTTTAATGACACC 59.018 41.667 0.00 0.00 0.00 4.16
2863 4057 3.746045 AGCTTCACTCGTGGTAAAGAA 57.254 42.857 0.00 0.00 0.00 2.52
2876 4070 6.817641 TCGTGGTAAAGAAAACTTGACAGTAA 59.182 34.615 0.00 0.00 30.68 2.24
3515 4709 7.458397 TGAACTCAGGTCCATTACAGTTAAAT 58.542 34.615 0.00 0.00 0.00 1.40
3516 4710 7.390440 TGAACTCAGGTCCATTACAGTTAAATG 59.610 37.037 0.45 0.45 34.71 2.32
3517 4711 7.016153 ACTCAGGTCCATTACAGTTAAATGA 57.984 36.000 10.35 0.00 36.61 2.57
3518 4712 7.458397 ACTCAGGTCCATTACAGTTAAATGAA 58.542 34.615 10.35 0.38 36.61 2.57
3519 4713 7.942341 ACTCAGGTCCATTACAGTTAAATGAAA 59.058 33.333 10.35 0.00 36.61 2.69
3520 4714 8.698973 TCAGGTCCATTACAGTTAAATGAAAA 57.301 30.769 10.35 4.09 36.61 2.29
3521 4715 9.308000 TCAGGTCCATTACAGTTAAATGAAAAT 57.692 29.630 10.35 6.22 36.61 1.82
3522 4716 9.357652 CAGGTCCATTACAGTTAAATGAAAATG 57.642 33.333 19.42 19.42 36.61 2.32
3523 4717 9.088987 AGGTCCATTACAGTTAAATGAAAATGT 57.911 29.630 22.04 10.26 40.45 2.71
3524 4718 9.139174 GGTCCATTACAGTTAAATGAAAATGTG 57.861 33.333 22.04 16.94 38.09 3.21
3525 4719 8.647226 GTCCATTACAGTTAAATGAAAATGTGC 58.353 33.333 22.04 15.32 38.09 4.57
3589 5324 5.706833 TGAGACATGCATTTAGCTTTCTTGA 59.293 36.000 0.00 0.00 45.94 3.02
3598 5333 7.394359 TGCATTTAGCTTTCTTGATTTAGTCCT 59.606 33.333 0.00 0.00 45.94 3.85
3641 5377 4.917385 TGTCCACCTAATGCTACATTTGT 58.083 39.130 0.00 0.00 0.00 2.83
3672 5408 2.883386 GCTATGCCTGCAGCTAATCTTT 59.117 45.455 8.66 0.00 44.23 2.52
3718 5454 4.690748 CGATATGTAACATAGCAACCCCTG 59.309 45.833 0.00 0.00 0.00 4.45
3719 5455 2.799126 TGTAACATAGCAACCCCTGG 57.201 50.000 0.00 0.00 0.00 4.45
3734 5470 5.175388 ACCCCTGGTAGAATTGTTAGTTC 57.825 43.478 0.00 0.00 32.11 3.01
3735 5471 4.018688 ACCCCTGGTAGAATTGTTAGTTCC 60.019 45.833 0.00 0.00 32.11 3.62
3854 5590 2.046604 GTGGCCCGTGGGAACTAC 60.047 66.667 9.72 0.00 37.50 2.73
3861 5597 1.202842 CCCGTGGGAACTACTTTGGTT 60.203 52.381 0.00 0.00 37.50 3.67
3864 5600 1.265905 GTGGGAACTACTTTGGTTGCG 59.734 52.381 0.00 0.00 36.19 4.85
3971 5709 9.722184 ATGGATGATGTACTCTATTTCATCTTG 57.278 33.333 10.11 0.00 41.42 3.02
3972 5710 8.927411 TGGATGATGTACTCTATTTCATCTTGA 58.073 33.333 10.11 0.00 41.42 3.02
3973 5711 9.421806 GGATGATGTACTCTATTTCATCTTGAG 57.578 37.037 10.11 0.00 41.42 3.02
3974 5712 9.979578 GATGATGTACTCTATTTCATCTTGAGT 57.020 33.333 0.00 0.00 39.57 3.41
4309 6173 2.605837 TCACGTTTTACTGCTCACCA 57.394 45.000 0.00 0.00 0.00 4.17
4316 6180 3.394674 TTTACTGCTCACCACGAATCA 57.605 42.857 0.00 0.00 0.00 2.57
4356 6220 7.226720 CGTTAGATTTAGCAGACCAATGGTTAT 59.773 37.037 6.30 0.00 35.25 1.89
4357 6221 8.903820 GTTAGATTTAGCAGACCAATGGTTATT 58.096 33.333 6.30 0.00 35.25 1.40
4406 6270 9.177608 TCAAAACTGGTACACTATATAGTACGT 57.822 33.333 15.03 12.12 41.07 3.57
4409 6273 7.875316 ACTGGTACACTATATAGTACGTACG 57.125 40.000 23.75 15.01 41.07 3.67
4410 6274 7.434492 ACTGGTACACTATATAGTACGTACGT 58.566 38.462 25.98 25.98 41.07 3.57
4411 6275 8.573885 ACTGGTACACTATATAGTACGTACGTA 58.426 37.037 23.60 23.60 41.07 3.57
4412 6276 9.574458 CTGGTACACTATATAGTACGTACGTAT 57.426 37.037 29.05 17.90 41.07 3.06
4445 6529 6.458630 AATAGTTGGTTTACCCTGGTAGTT 57.541 37.500 0.00 0.00 34.29 2.24
4469 6553 1.529865 CATGAGTGCTGCATCCATACG 59.470 52.381 5.27 0.00 0.00 3.06
4492 6585 5.276726 CGAGCTCATACTTTGTCATGACATG 60.277 44.000 28.32 23.89 41.52 3.21
4513 6606 3.937079 TGATGAAGCTATCACAAGCACTG 59.063 43.478 0.00 0.00 45.30 3.66
4556 8553 5.175491 CACCACATTCTGTGTAAATTGTTGC 59.825 40.000 6.53 0.00 46.45 4.17
4602 8611 2.224523 TGTTGACCTGCCTTCTTACTGG 60.225 50.000 0.00 0.00 0.00 4.00
4754 8763 5.106948 CGTGAAATGTATCATCATGCCCTAC 60.107 44.000 0.00 0.00 0.00 3.18
4789 8798 1.006043 TGCCAGTAGCTCTAGACCACT 59.994 52.381 0.00 0.00 44.23 4.00
4860 8879 0.922626 TGGTAGGGGCATGCATACAA 59.077 50.000 21.36 9.78 0.00 2.41
4880 8899 1.608590 ACAGCCGATCTTTGTTGTTGG 59.391 47.619 0.00 0.00 0.00 3.77
4964 8986 2.793232 AGTTCGAAACTGCGACACTTAC 59.207 45.455 0.00 0.00 41.01 2.34
4966 8988 2.658285 TCGAAACTGCGACACTTACTC 58.342 47.619 0.00 0.00 35.01 2.59
5068 9090 4.361783 TGACCCTATGAGATTCCAGACAA 58.638 43.478 0.00 0.00 0.00 3.18
5075 9098 4.224991 TGAGATTCCAGACAATGCATGA 57.775 40.909 0.00 0.00 0.00 3.07
5078 9101 5.067283 TGAGATTCCAGACAATGCATGAATG 59.933 40.000 11.24 4.15 0.00 2.67
5116 9139 7.754851 AAGTTACATTTTTCCGATAACCTGT 57.245 32.000 0.00 0.00 0.00 4.00
5117 9140 7.373778 AGTTACATTTTTCCGATAACCTGTC 57.626 36.000 0.00 0.00 0.00 3.51
5118 9141 6.938030 AGTTACATTTTTCCGATAACCTGTCA 59.062 34.615 0.00 0.00 0.00 3.58
5126 9149 2.673368 CCGATAACCTGTCAAAGTCTGC 59.327 50.000 0.00 0.00 0.00 4.26
5127 9150 3.589988 CGATAACCTGTCAAAGTCTGCT 58.410 45.455 0.00 0.00 0.00 4.24
5131 9154 3.838244 ACCTGTCAAAGTCTGCTAACA 57.162 42.857 0.00 0.00 0.00 2.41
5132 9155 4.150897 ACCTGTCAAAGTCTGCTAACAA 57.849 40.909 0.00 0.00 0.00 2.83
5133 9156 4.130118 ACCTGTCAAAGTCTGCTAACAAG 58.870 43.478 0.00 0.00 0.00 3.16
5134 9157 4.130118 CCTGTCAAAGTCTGCTAACAAGT 58.870 43.478 0.00 0.00 0.00 3.16
5135 9158 4.024556 CCTGTCAAAGTCTGCTAACAAGTG 60.025 45.833 0.00 0.00 0.00 3.16
5136 9159 3.312421 TGTCAAAGTCTGCTAACAAGTGC 59.688 43.478 0.00 0.00 0.00 4.40
5137 9160 3.312421 GTCAAAGTCTGCTAACAAGTGCA 59.688 43.478 0.00 0.00 37.63 4.57
5142 9165 1.951510 TGCTAACAAGTGCAGCAGC 59.048 52.632 0.00 0.00 40.26 5.25
5187 9210 4.403585 GGTAACCATGAAGTACTCCCTC 57.596 50.000 0.00 0.00 0.00 4.30
5188 9211 4.031611 GGTAACCATGAAGTACTCCCTCT 58.968 47.826 0.00 0.00 0.00 3.69
5189 9212 4.141914 GGTAACCATGAAGTACTCCCTCTG 60.142 50.000 0.00 0.00 0.00 3.35
5190 9213 2.472029 ACCATGAAGTACTCCCTCTGG 58.528 52.381 0.00 2.29 0.00 3.86
5191 9214 2.225650 ACCATGAAGTACTCCCTCTGGT 60.226 50.000 0.00 2.93 0.00 4.00
5192 9215 2.840651 CCATGAAGTACTCCCTCTGGTT 59.159 50.000 0.00 0.00 0.00 3.67
5193 9216 3.118592 CCATGAAGTACTCCCTCTGGTTC 60.119 52.174 0.00 0.00 0.00 3.62
5194 9217 3.544698 TGAAGTACTCCCTCTGGTTCT 57.455 47.619 0.00 0.00 0.00 3.01
5195 9218 3.858135 TGAAGTACTCCCTCTGGTTCTT 58.142 45.455 0.00 0.00 0.00 2.52
5196 9219 4.232091 TGAAGTACTCCCTCTGGTTCTTT 58.768 43.478 0.00 0.00 0.00 2.52
5197 9220 4.658901 TGAAGTACTCCCTCTGGTTCTTTT 59.341 41.667 0.00 0.00 0.00 2.27
5198 9221 5.132144 TGAAGTACTCCCTCTGGTTCTTTTT 59.868 40.000 0.00 0.00 0.00 1.94
5199 9222 6.328148 TGAAGTACTCCCTCTGGTTCTTTTTA 59.672 38.462 0.00 0.00 0.00 1.52
5200 9223 6.111669 AGTACTCCCTCTGGTTCTTTTTAC 57.888 41.667 0.00 0.00 0.00 2.01
5201 9224 5.845065 AGTACTCCCTCTGGTTCTTTTTACT 59.155 40.000 0.00 0.00 0.00 2.24
5202 9225 5.230323 ACTCCCTCTGGTTCTTTTTACTC 57.770 43.478 0.00 0.00 0.00 2.59
5203 9226 4.908481 ACTCCCTCTGGTTCTTTTTACTCT 59.092 41.667 0.00 0.00 0.00 3.24
5204 9227 5.221742 ACTCCCTCTGGTTCTTTTTACTCTG 60.222 44.000 0.00 0.00 0.00 3.35
5205 9228 3.753797 CCCTCTGGTTCTTTTTACTCTGC 59.246 47.826 0.00 0.00 0.00 4.26
5206 9229 4.389374 CCTCTGGTTCTTTTTACTCTGCA 58.611 43.478 0.00 0.00 0.00 4.41
5207 9230 5.006386 CCTCTGGTTCTTTTTACTCTGCAT 58.994 41.667 0.00 0.00 0.00 3.96
5208 9231 6.173339 CCTCTGGTTCTTTTTACTCTGCATA 58.827 40.000 0.00 0.00 0.00 3.14
5209 9232 6.825721 CCTCTGGTTCTTTTTACTCTGCATAT 59.174 38.462 0.00 0.00 0.00 1.78
5210 9233 7.987458 CCTCTGGTTCTTTTTACTCTGCATATA 59.013 37.037 0.00 0.00 0.00 0.86
5211 9234 9.383519 CTCTGGTTCTTTTTACTCTGCATATAA 57.616 33.333 0.00 0.00 0.00 0.98
5212 9235 9.383519 TCTGGTTCTTTTTACTCTGCATATAAG 57.616 33.333 0.00 0.00 0.00 1.73
5213 9236 9.383519 CTGGTTCTTTTTACTCTGCATATAAGA 57.616 33.333 0.00 0.00 0.00 2.10
5214 9237 9.733556 TGGTTCTTTTTACTCTGCATATAAGAA 57.266 29.630 0.00 0.00 0.00 2.52
5235 9258 7.787725 AGAATTGTCTAAAGTCAAACTTCGT 57.212 32.000 0.00 0.00 37.47 3.85
5236 9259 8.882415 AGAATTGTCTAAAGTCAAACTTCGTA 57.118 30.769 0.00 0.00 37.47 3.43
5237 9260 9.321562 AGAATTGTCTAAAGTCAAACTTCGTAA 57.678 29.630 0.00 0.00 37.47 3.18
5238 9261 9.925268 GAATTGTCTAAAGTCAAACTTCGTAAA 57.075 29.630 0.00 0.00 37.47 2.01
5239 9262 9.931210 AATTGTCTAAAGTCAAACTTCGTAAAG 57.069 29.630 0.00 0.00 37.47 1.85
5317 9340 8.911662 ACAATATGAAAATTTAAGTCACAACGC 58.088 29.630 0.00 0.00 0.00 4.84
5318 9341 8.910666 CAATATGAAAATTTAAGTCACAACGCA 58.089 29.630 0.00 0.00 0.00 5.24
5319 9342 9.638239 AATATGAAAATTTAAGTCACAACGCAT 57.362 25.926 0.00 0.00 0.00 4.73
5320 9343 6.984740 TGAAAATTTAAGTCACAACGCATC 57.015 33.333 0.00 0.00 0.00 3.91
5321 9344 6.734137 TGAAAATTTAAGTCACAACGCATCT 58.266 32.000 0.00 0.00 0.00 2.90
5322 9345 7.866729 TGAAAATTTAAGTCACAACGCATCTA 58.133 30.769 0.00 0.00 0.00 1.98
5323 9346 8.346300 TGAAAATTTAAGTCACAACGCATCTAA 58.654 29.630 0.00 0.00 0.00 2.10
5324 9347 9.341899 GAAAATTTAAGTCACAACGCATCTAAT 57.658 29.630 0.00 0.00 0.00 1.73
5325 9348 8.673626 AAATTTAAGTCACAACGCATCTAATG 57.326 30.769 0.00 0.00 0.00 1.90
5326 9349 7.609760 ATTTAAGTCACAACGCATCTAATGA 57.390 32.000 0.00 0.00 0.00 2.57
5327 9350 7.609760 TTTAAGTCACAACGCATCTAATGAT 57.390 32.000 0.00 0.00 0.00 2.45
5328 9351 8.710835 TTTAAGTCACAACGCATCTAATGATA 57.289 30.769 0.00 0.00 0.00 2.15
5329 9352 8.710835 TTAAGTCACAACGCATCTAATGATAA 57.289 30.769 0.00 0.00 0.00 1.75
5330 9353 7.792374 AAGTCACAACGCATCTAATGATAAT 57.208 32.000 0.00 0.00 0.00 1.28
5331 9354 7.182361 AGTCACAACGCATCTAATGATAATG 57.818 36.000 0.00 0.00 0.00 1.90
5332 9355 6.986231 AGTCACAACGCATCTAATGATAATGA 59.014 34.615 0.00 0.00 0.00 2.57
5333 9356 7.658982 AGTCACAACGCATCTAATGATAATGAT 59.341 33.333 0.00 0.00 0.00 2.45
5334 9357 8.285394 GTCACAACGCATCTAATGATAATGATT 58.715 33.333 0.00 0.00 0.00 2.57
5335 9358 8.839343 TCACAACGCATCTAATGATAATGATTT 58.161 29.630 0.00 0.00 0.00 2.17
5336 9359 9.110617 CACAACGCATCTAATGATAATGATTTC 57.889 33.333 0.00 0.00 0.00 2.17
5337 9360 8.839343 ACAACGCATCTAATGATAATGATTTCA 58.161 29.630 0.00 0.00 0.00 2.69
5338 9361 9.110617 CAACGCATCTAATGATAATGATTTCAC 57.889 33.333 0.00 0.00 0.00 3.18
5339 9362 8.382030 ACGCATCTAATGATAATGATTTCACA 57.618 30.769 0.00 0.00 0.00 3.58
5340 9363 9.006839 ACGCATCTAATGATAATGATTTCACAT 57.993 29.630 0.00 0.00 0.00 3.21
5341 9364 9.836076 CGCATCTAATGATAATGATTTCACATT 57.164 29.630 0.00 0.00 42.17 2.71
5418 9441 9.722056 AATTTCAGACAAATCTTATATGCGAAC 57.278 29.630 0.00 0.00 30.42 3.95
5419 9442 8.492673 TTTCAGACAAATCTTATATGCGAACT 57.507 30.769 0.00 0.00 30.42 3.01
5420 9443 9.594478 TTTCAGACAAATCTTATATGCGAACTA 57.406 29.630 0.00 0.00 30.42 2.24
5421 9444 8.803201 TCAGACAAATCTTATATGCGAACTAG 57.197 34.615 0.00 0.00 30.42 2.57
5422 9445 8.414003 TCAGACAAATCTTATATGCGAACTAGT 58.586 33.333 0.00 0.00 30.42 2.57
5423 9446 9.678941 CAGACAAATCTTATATGCGAACTAGTA 57.321 33.333 0.00 0.00 30.42 1.82
5457 9480 7.784550 ACGTAGTAGTATTCTTTAATGGGGGTA 59.215 37.037 0.00 0.00 41.94 3.69
5462 9485 9.636789 GTAGTATTCTTTAATGGGGGTAACAAT 57.363 33.333 0.00 0.00 39.74 2.71
5464 9487 8.340757 AGTATTCTTTAATGGGGGTAACAATGA 58.659 33.333 0.00 0.00 39.74 2.57
5466 9489 7.475137 TTCTTTAATGGGGGTAACAATGAAG 57.525 36.000 0.00 0.00 39.74 3.02
5467 9490 6.557568 TCTTTAATGGGGGTAACAATGAAGT 58.442 36.000 0.00 0.00 39.74 3.01
5468 9491 7.700846 TCTTTAATGGGGGTAACAATGAAGTA 58.299 34.615 0.00 0.00 39.74 2.24
5470 9493 4.519906 ATGGGGGTAACAATGAAGTAGG 57.480 45.455 0.00 0.00 39.74 3.18
5476 9499 4.323562 GGGTAACAATGAAGTAGGAGCAGT 60.324 45.833 0.00 0.00 39.74 4.40
5478 9501 4.899352 AACAATGAAGTAGGAGCAGTCT 57.101 40.909 0.00 0.00 0.00 3.24
5481 9504 7.661536 AACAATGAAGTAGGAGCAGTCTATA 57.338 36.000 0.00 0.00 0.00 1.31
5482 9505 7.661536 ACAATGAAGTAGGAGCAGTCTATAA 57.338 36.000 0.00 0.00 0.00 0.98
5483 9506 8.256356 ACAATGAAGTAGGAGCAGTCTATAAT 57.744 34.615 0.00 0.00 0.00 1.28
5484 9507 8.364142 ACAATGAAGTAGGAGCAGTCTATAATC 58.636 37.037 0.00 0.00 0.00 1.75
5485 9508 6.902771 TGAAGTAGGAGCAGTCTATAATCC 57.097 41.667 0.00 0.00 0.00 3.01
5486 9509 6.373759 TGAAGTAGGAGCAGTCTATAATCCA 58.626 40.000 0.00 0.00 32.21 3.41
5487 9510 6.839134 TGAAGTAGGAGCAGTCTATAATCCAA 59.161 38.462 0.00 0.00 32.21 3.53
5488 9511 6.658188 AGTAGGAGCAGTCTATAATCCAAC 57.342 41.667 0.00 0.00 32.21 3.77
5489 9512 4.592485 AGGAGCAGTCTATAATCCAACG 57.408 45.455 0.00 0.00 32.21 4.10
5490 9513 4.215908 AGGAGCAGTCTATAATCCAACGA 58.784 43.478 0.00 0.00 32.21 3.85
5491 9514 4.279671 AGGAGCAGTCTATAATCCAACGAG 59.720 45.833 0.00 0.00 32.21 4.18
5493 9516 5.221263 GGAGCAGTCTATAATCCAACGAGAA 60.221 44.000 0.00 0.00 0.00 2.87
5494 9517 5.837437 AGCAGTCTATAATCCAACGAGAAG 58.163 41.667 0.00 0.00 0.00 2.85
5495 9518 4.446051 GCAGTCTATAATCCAACGAGAAGC 59.554 45.833 0.00 0.00 0.00 3.86
5496 9519 5.737635 GCAGTCTATAATCCAACGAGAAGCT 60.738 44.000 0.00 0.00 0.00 3.74
5500 9523 6.639279 GTCTATAATCCAACGAGAAGCTCTTC 59.361 42.308 1.52 1.52 39.78 2.87
5502 9525 3.902881 ATCCAACGAGAAGCTCTTCAT 57.097 42.857 11.69 0.00 41.84 2.57
5503 9526 2.964740 TCCAACGAGAAGCTCTTCATG 58.035 47.619 11.69 6.11 41.84 3.07
5504 9527 2.300152 TCCAACGAGAAGCTCTTCATGT 59.700 45.455 11.69 6.66 41.84 3.21
5505 9528 2.414481 CCAACGAGAAGCTCTTCATGTG 59.586 50.000 11.69 4.64 41.84 3.21
5506 9529 1.719600 ACGAGAAGCTCTTCATGTGC 58.280 50.000 11.69 0.00 41.84 4.57
5508 9531 1.659601 CGAGAAGCTCTTCATGTGCTG 59.340 52.381 11.69 0.00 43.74 4.41
5509 9532 1.397692 GAGAAGCTCTTCATGTGCTGC 59.602 52.381 11.69 0.00 43.74 5.25
5510 9533 0.096628 GAAGCTCTTCATGTGCTGCG 59.903 55.000 4.85 0.00 43.74 5.18
5513 9536 1.706301 CTCTTCATGTGCTGCGTCG 59.294 57.895 0.00 0.00 0.00 5.12
5514 9537 0.733909 CTCTTCATGTGCTGCGTCGA 60.734 55.000 0.00 0.00 0.00 4.20
5515 9538 0.108662 TCTTCATGTGCTGCGTCGAT 60.109 50.000 0.00 0.00 0.00 3.59
5516 9539 0.723414 CTTCATGTGCTGCGTCGATT 59.277 50.000 0.00 0.00 0.00 3.34
5517 9540 0.721154 TTCATGTGCTGCGTCGATTC 59.279 50.000 0.00 0.00 0.00 2.52
5518 9541 0.389687 TCATGTGCTGCGTCGATTCA 60.390 50.000 0.00 0.00 0.00 2.57
5519 9542 0.025898 CATGTGCTGCGTCGATTCAG 59.974 55.000 11.20 11.20 0.00 3.02
5521 9544 0.599991 TGTGCTGCGTCGATTCAGTT 60.600 50.000 15.29 0.00 33.09 3.16
5522 9545 0.512952 GTGCTGCGTCGATTCAGTTT 59.487 50.000 15.29 0.00 33.09 2.66
5523 9546 1.069906 GTGCTGCGTCGATTCAGTTTT 60.070 47.619 15.29 0.00 33.09 2.43
5524 9547 1.194547 TGCTGCGTCGATTCAGTTTTC 59.805 47.619 15.29 3.30 33.09 2.29
5525 9548 1.194547 GCTGCGTCGATTCAGTTTTCA 59.805 47.619 15.29 0.00 33.09 2.69
5526 9549 2.827555 CTGCGTCGATTCAGTTTTCAC 58.172 47.619 0.00 0.00 0.00 3.18
5528 9551 2.869801 TGCGTCGATTCAGTTTTCACTT 59.130 40.909 0.00 0.00 0.00 3.16
5530 9553 4.201871 TGCGTCGATTCAGTTTTCACTTTT 60.202 37.500 0.00 0.00 0.00 2.27
5531 9554 4.375988 GCGTCGATTCAGTTTTCACTTTTC 59.624 41.667 0.00 0.00 0.00 2.29
5532 9555 5.498159 CGTCGATTCAGTTTTCACTTTTCA 58.502 37.500 0.00 0.00 0.00 2.69
5533 9556 5.963004 CGTCGATTCAGTTTTCACTTTTCAA 59.037 36.000 0.00 0.00 0.00 2.69
5534 9557 6.467682 CGTCGATTCAGTTTTCACTTTTCAAA 59.532 34.615 0.00 0.00 0.00 2.69
5535 9558 7.511506 CGTCGATTCAGTTTTCACTTTTCAAAC 60.512 37.037 0.00 0.00 0.00 2.93
5537 9560 7.272515 TCGATTCAGTTTTCACTTTTCAAACAC 59.727 33.333 0.00 0.00 33.58 3.32
5538 9561 7.061673 CGATTCAGTTTTCACTTTTCAAACACA 59.938 33.333 0.00 0.00 33.58 3.72
5541 9564 6.090628 TCAGTTTTCACTTTTCAAACACATGC 59.909 34.615 0.00 0.00 33.58 4.06
5542 9565 5.931146 AGTTTTCACTTTTCAAACACATGCA 59.069 32.000 0.00 0.00 33.58 3.96
5543 9566 6.594937 AGTTTTCACTTTTCAAACACATGCAT 59.405 30.769 0.00 0.00 33.58 3.96
5544 9567 6.586868 TTTCACTTTTCAAACACATGCATC 57.413 33.333 0.00 0.00 0.00 3.91
5545 9568 4.619973 TCACTTTTCAAACACATGCATCC 58.380 39.130 0.00 0.00 0.00 3.51
5547 9570 5.534278 TCACTTTTCAAACACATGCATCCTA 59.466 36.000 0.00 0.00 0.00 2.94
5548 9571 6.209192 TCACTTTTCAAACACATGCATCCTAT 59.791 34.615 0.00 0.00 0.00 2.57
5549 9572 6.529125 CACTTTTCAAACACATGCATCCTATC 59.471 38.462 0.00 0.00 0.00 2.08
5550 9573 5.581126 TTTCAAACACATGCATCCTATCC 57.419 39.130 0.00 0.00 0.00 2.59
5552 9575 5.628797 TCAAACACATGCATCCTATCCTA 57.371 39.130 0.00 0.00 0.00 2.94
5553 9576 6.191657 TCAAACACATGCATCCTATCCTAT 57.808 37.500 0.00 0.00 0.00 2.57
5554 9577 6.233434 TCAAACACATGCATCCTATCCTATC 58.767 40.000 0.00 0.00 0.00 2.08
5557 9580 6.537453 ACACATGCATCCTATCCTATCTAC 57.463 41.667 0.00 0.00 0.00 2.59
5558 9581 6.019108 ACACATGCATCCTATCCTATCTACA 58.981 40.000 0.00 0.00 0.00 2.74
5559 9582 6.071108 ACACATGCATCCTATCCTATCTACAC 60.071 42.308 0.00 0.00 0.00 2.90
5560 9583 5.423610 ACATGCATCCTATCCTATCTACACC 59.576 44.000 0.00 0.00 0.00 4.16
5561 9584 4.017126 TGCATCCTATCCTATCTACACCG 58.983 47.826 0.00 0.00 0.00 4.94
5563 9586 4.463186 GCATCCTATCCTATCTACACCGTT 59.537 45.833 0.00 0.00 0.00 4.44
5566 9589 5.888901 TCCTATCCTATCTACACCGTTGAT 58.111 41.667 0.00 0.00 33.26 2.57
5567 9590 5.710567 TCCTATCCTATCTACACCGTTGATG 59.289 44.000 0.00 0.00 31.40 3.07
5570 9593 6.672266 ATCCTATCTACACCGTTGATGAAT 57.328 37.500 0.00 0.00 31.40 2.57
5571 9594 6.085555 TCCTATCTACACCGTTGATGAATC 57.914 41.667 0.00 0.00 31.40 2.52
5572 9595 4.917998 CCTATCTACACCGTTGATGAATCG 59.082 45.833 0.00 0.00 31.40 3.34
5574 9597 1.593006 CTACACCGTTGATGAATCGGC 59.407 52.381 6.00 0.00 46.92 5.54
5575 9598 0.321210 ACACCGTTGATGAATCGGCA 60.321 50.000 6.00 0.00 46.92 5.69
5576 9599 0.374758 CACCGTTGATGAATCGGCAG 59.625 55.000 6.00 0.00 46.92 4.85
5577 9600 0.249120 ACCGTTGATGAATCGGCAGA 59.751 50.000 6.00 0.00 46.92 4.26
5578 9601 1.338674 ACCGTTGATGAATCGGCAGAA 60.339 47.619 6.00 0.00 46.92 3.02
5579 9602 1.328680 CCGTTGATGAATCGGCAGAAG 59.671 52.381 0.00 0.00 37.90 2.85
5580 9603 2.270923 CGTTGATGAATCGGCAGAAGA 58.729 47.619 0.00 0.00 0.00 2.87
5581 9604 2.672874 CGTTGATGAATCGGCAGAAGAA 59.327 45.455 0.00 0.00 0.00 2.52
5582 9605 3.310774 CGTTGATGAATCGGCAGAAGAAT 59.689 43.478 0.00 0.00 0.00 2.40
5583 9606 4.551603 CGTTGATGAATCGGCAGAAGAATC 60.552 45.833 0.00 0.00 0.00 2.52
5584 9607 3.470709 TGATGAATCGGCAGAAGAATCC 58.529 45.455 0.00 0.00 0.00 3.01
5585 9608 1.939974 TGAATCGGCAGAAGAATCCG 58.060 50.000 0.00 0.00 44.16 4.18
5586 9609 1.207089 TGAATCGGCAGAAGAATCCGT 59.793 47.619 0.00 0.00 43.35 4.69
5587 9610 2.280628 GAATCGGCAGAAGAATCCGTT 58.719 47.619 0.00 0.00 43.35 4.44
5588 9611 1.941325 ATCGGCAGAAGAATCCGTTC 58.059 50.000 0.00 0.00 43.35 3.95
5589 9612 0.457853 TCGGCAGAAGAATCCGTTCG 60.458 55.000 0.00 0.00 43.35 3.95
5590 9613 0.457853 CGGCAGAAGAATCCGTTCGA 60.458 55.000 0.00 0.00 39.38 3.71
5591 9614 1.802880 CGGCAGAAGAATCCGTTCGAT 60.803 52.381 0.00 0.00 39.38 3.59
5592 9615 1.594862 GGCAGAAGAATCCGTTCGATG 59.405 52.381 0.00 0.00 39.38 3.84
5593 9616 2.271800 GCAGAAGAATCCGTTCGATGT 58.728 47.619 0.00 0.00 39.38 3.06
5594 9617 2.282820 GCAGAAGAATCCGTTCGATGTC 59.717 50.000 0.00 0.00 39.38 3.06
5595 9618 3.775202 CAGAAGAATCCGTTCGATGTCT 58.225 45.455 0.00 0.00 39.38 3.41
5596 9619 3.794028 CAGAAGAATCCGTTCGATGTCTC 59.206 47.826 0.00 0.00 39.38 3.36
5597 9620 2.476873 AGAATCCGTTCGATGTCTCG 57.523 50.000 0.00 0.00 46.41 4.04
5607 9630 3.929095 GATGTCTCGACAAACGCAC 57.071 52.632 3.60 0.00 45.41 5.34
5608 9631 0.091344 GATGTCTCGACAAACGCACG 59.909 55.000 3.60 0.00 45.41 5.34
5609 9632 1.886861 ATGTCTCGACAAACGCACGC 61.887 55.000 3.60 0.00 45.41 5.34
5610 9633 3.391631 TCTCGACAAACGCACGCG 61.392 61.111 10.36 10.36 46.03 6.01
5627 9650 3.773404 GCGCCCAACGGGTAGGTA 61.773 66.667 0.00 0.00 46.51 3.08
5628 9651 2.185093 CGCCCAACGGGTAGGTAC 59.815 66.667 0.06 0.00 46.51 3.34
5629 9652 2.353610 CGCCCAACGGGTAGGTACT 61.354 63.158 0.06 0.00 46.51 2.73
5630 9653 1.519246 GCCCAACGGGTAGGTACTC 59.481 63.158 0.06 0.00 46.51 2.59
5635 9658 3.207669 CGGGTAGGTACTCGCGCT 61.208 66.667 5.56 0.00 43.79 5.92
5636 9659 2.720605 GGGTAGGTACTCGCGCTC 59.279 66.667 5.56 0.00 41.75 5.03
5637 9660 2.327244 GGTAGGTACTCGCGCTCG 59.673 66.667 5.56 0.00 41.75 5.03
5638 9661 2.352115 GTAGGTACTCGCGCTCGC 60.352 66.667 5.56 3.90 41.75 5.03
5662 9685 3.524606 GCGGGTAGCTGCGACCTA 61.525 66.667 27.21 0.00 44.04 3.08
5663 9686 2.412112 CGGGTAGCTGCGACCTAC 59.588 66.667 27.21 13.55 37.13 3.18
5668 9691 0.667453 GTAGCTGCGACCTACCTACC 59.333 60.000 0.00 0.00 31.22 3.18
5669 9692 0.816825 TAGCTGCGACCTACCTACCG 60.817 60.000 0.00 0.00 0.00 4.02
5670 9693 3.117372 CTGCGACCTACCTACCGG 58.883 66.667 0.00 0.00 0.00 5.28
5671 9694 3.135056 CTGCGACCTACCTACCGGC 62.135 68.421 0.00 0.00 0.00 6.13
5672 9695 4.261781 GCGACCTACCTACCGGCG 62.262 72.222 0.00 0.00 0.00 6.46
5673 9696 3.589881 CGACCTACCTACCGGCGG 61.590 72.222 27.06 27.06 0.00 6.13
5674 9697 3.909285 GACCTACCTACCGGCGGC 61.909 72.222 28.71 1.51 0.00 6.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 58 1.737793 GGACGGATGATGCGAAAAAGT 59.262 47.619 14.52 0.00 34.49 2.66
78 81 0.172578 CTTGGCGTAGATCGGTGTGA 59.827 55.000 0.00 0.00 40.26 3.58
85 88 5.050702 GCACTCTTTTATCTTGGCGTAGATC 60.051 44.000 5.34 0.00 36.34 2.75
109 112 1.886542 GGTTTGTTCCTAGCAACCCTG 59.113 52.381 0.00 0.00 0.00 4.45
110 113 1.497286 TGGTTTGTTCCTAGCAACCCT 59.503 47.619 0.00 0.00 30.93 4.34
118 121 7.007723 ACCTTTAATCACATGGTTTGTTCCTA 58.992 34.615 0.00 0.00 36.00 2.94
121 124 6.981722 AGACCTTTAATCACATGGTTTGTTC 58.018 36.000 0.00 0.00 36.00 3.18
162 165 7.049754 GGGATGAATTAATGGAGTGCATTTTT 58.950 34.615 15.51 9.64 0.00 1.94
192 195 8.609483 AGTCGAGGATATACTTATACTACCCAA 58.391 37.037 0.00 0.00 28.44 4.12
193 196 8.155620 AGTCGAGGATATACTTATACTACCCA 57.844 38.462 0.00 0.00 28.44 4.51
213 223 4.737279 CGACTCTACTCGTGTTATAGTCGA 59.263 45.833 27.02 7.95 44.60 4.20
225 235 4.093703 AGTGTGAGAATTCGACTCTACTCG 59.906 45.833 11.33 0.00 35.66 4.18
244 254 4.621747 GCATGTCTGCTCTTAGGTTAGTGT 60.622 45.833 0.00 0.00 45.32 3.55
263 273 7.677747 GCCTGAACATGAAAATATTTTGGCATG 60.678 37.037 26.01 26.01 37.89 4.06
275 289 6.321181 AGAAGTTAGTTGCCTGAACATGAAAA 59.679 34.615 0.00 0.00 36.98 2.29
282 296 2.814336 CCCAGAAGTTAGTTGCCTGAAC 59.186 50.000 0.00 0.00 34.40 3.18
287 301 5.067954 TCTTTTACCCAGAAGTTAGTTGCC 58.932 41.667 0.00 0.00 0.00 4.52
296 310 7.334844 AGTTGTTTCTTCTTTTACCCAGAAG 57.665 36.000 3.67 3.67 46.04 2.85
316 333 2.358737 GGTCTGCCCGTGGAGTTG 60.359 66.667 0.00 0.00 0.00 3.16
329 346 1.004394 GAAACGGGGGAGATTTGGTCT 59.996 52.381 0.00 0.00 40.81 3.85
338 355 4.468689 GGCGGAGAAACGGGGGAG 62.469 72.222 0.00 0.00 0.00 4.30
348 365 0.322636 TAAAATTTGCCCGGCGGAGA 60.323 50.000 30.79 10.58 0.00 3.71
349 366 0.100503 CTAAAATTTGCCCGGCGGAG 59.899 55.000 30.79 18.83 0.00 4.63
352 369 1.596954 CGATCTAAAATTTGCCCGGCG 60.597 52.381 4.58 0.00 0.00 6.46
353 370 1.269051 CCGATCTAAAATTTGCCCGGC 60.269 52.381 1.04 1.04 0.00 6.13
357 374 7.425606 ACACATTATCCGATCTAAAATTTGCC 58.574 34.615 0.00 0.00 0.00 4.52
361 378 7.041098 GGCAGACACATTATCCGATCTAAAATT 60.041 37.037 0.00 0.00 0.00 1.82
362 379 6.428159 GGCAGACACATTATCCGATCTAAAAT 59.572 38.462 0.00 0.00 0.00 1.82
363 380 5.758296 GGCAGACACATTATCCGATCTAAAA 59.242 40.000 0.00 0.00 0.00 1.52
378 395 1.943730 AAACCCCCAAGGCAGACACA 61.944 55.000 0.00 0.00 40.58 3.72
385 402 1.110518 TCGACAAAAACCCCCAAGGC 61.111 55.000 0.00 0.00 40.58 4.35
386 403 0.958822 CTCGACAAAAACCCCCAAGG 59.041 55.000 0.00 0.00 43.78 3.61
389 406 0.547075 TGACTCGACAAAAACCCCCA 59.453 50.000 0.00 0.00 0.00 4.96
394 411 4.787598 AGATTGCATGACTCGACAAAAAC 58.212 39.130 0.00 0.00 0.00 2.43
395 412 5.214417 CAAGATTGCATGACTCGACAAAAA 58.786 37.500 0.00 0.00 0.00 1.94
396 413 4.786507 CAAGATTGCATGACTCGACAAAA 58.213 39.130 0.00 0.00 0.00 2.44
397 414 4.408993 CAAGATTGCATGACTCGACAAA 57.591 40.909 0.00 0.00 0.00 2.83
424 441 7.095816 CGTGTGTCTGAATCTGTATTGTGTTAA 60.096 37.037 0.00 0.00 0.00 2.01
425 442 6.364976 CGTGTGTCTGAATCTGTATTGTGTTA 59.635 38.462 0.00 0.00 0.00 2.41
426 443 5.177511 CGTGTGTCTGAATCTGTATTGTGTT 59.822 40.000 0.00 0.00 0.00 3.32
429 446 3.679980 GCGTGTGTCTGAATCTGTATTGT 59.320 43.478 0.00 0.00 0.00 2.71
434 451 0.667487 CCGCGTGTGTCTGAATCTGT 60.667 55.000 4.92 0.00 0.00 3.41
436 453 0.317160 TTCCGCGTGTGTCTGAATCT 59.683 50.000 4.92 0.00 0.00 2.40
437 454 1.061131 CATTCCGCGTGTGTCTGAATC 59.939 52.381 4.92 0.00 0.00 2.52
439 456 1.565156 GCATTCCGCGTGTGTCTGAA 61.565 55.000 4.92 0.00 0.00 3.02
440 457 2.027073 GCATTCCGCGTGTGTCTGA 61.027 57.895 4.92 0.00 0.00 3.27
441 458 1.840630 TTGCATTCCGCGTGTGTCTG 61.841 55.000 4.92 0.00 46.97 3.51
442 459 1.163420 TTTGCATTCCGCGTGTGTCT 61.163 50.000 4.92 0.00 46.97 3.41
443 460 0.317436 TTTTGCATTCCGCGTGTGTC 60.317 50.000 4.92 0.00 46.97 3.67
444 461 0.313672 ATTTTGCATTCCGCGTGTGT 59.686 45.000 4.92 0.00 46.97 3.72
445 462 1.124658 CAATTTTGCATTCCGCGTGTG 59.875 47.619 4.92 1.40 46.97 3.82
446 463 1.417372 CAATTTTGCATTCCGCGTGT 58.583 45.000 4.92 0.00 46.97 4.49
463 480 8.093307 TGAAATAGGCAGAATGTTTTAATGCAA 58.907 29.630 0.00 0.00 39.31 4.08
476 493 5.525012 CGATGAACTGATGAAATAGGCAGAA 59.475 40.000 0.00 0.00 32.86 3.02
524 541 4.142293 GGGGATTTCTGATGAGCTGTTTTC 60.142 45.833 0.00 0.00 0.00 2.29
548 664 8.620533 TTTTTGTTTCTGGTTTGTTTTGTTTG 57.379 26.923 0.00 0.00 0.00 2.93
578 694 4.141251 TGCCTGGTTTCTTCTAGAAAGGTT 60.141 41.667 16.44 0.00 44.07 3.50
579 695 3.394606 TGCCTGGTTTCTTCTAGAAAGGT 59.605 43.478 16.44 0.00 44.07 3.50
580 696 4.006319 CTGCCTGGTTTCTTCTAGAAAGG 58.994 47.826 12.49 12.49 44.07 3.11
581 697 4.453819 CACTGCCTGGTTTCTTCTAGAAAG 59.546 45.833 6.63 0.00 44.07 2.62
762 882 1.770110 CCGATGGGAAGGGGATGGA 60.770 63.158 0.00 0.00 34.06 3.41
776 896 1.123928 GGAGTGATTCTGACCCCGAT 58.876 55.000 0.00 0.00 0.00 4.18
777 897 1.320344 CGGAGTGATTCTGACCCCGA 61.320 60.000 0.00 0.00 37.87 5.14
778 898 1.141881 CGGAGTGATTCTGACCCCG 59.858 63.158 0.00 0.00 33.75 5.73
936 1069 2.202824 CGATAAACCCCGCGAGCA 60.203 61.111 8.23 0.00 0.00 4.26
989 1122 3.182590 ATCATCATCCCCCACGCCG 62.183 63.158 0.00 0.00 0.00 6.46
990 1123 1.601759 CATCATCATCCCCCACGCC 60.602 63.158 0.00 0.00 0.00 5.68
991 1124 1.601759 CCATCATCATCCCCCACGC 60.602 63.158 0.00 0.00 0.00 5.34
992 1125 0.250467 GTCCATCATCATCCCCCACG 60.250 60.000 0.00 0.00 0.00 4.94
993 1126 0.250467 CGTCCATCATCATCCCCCAC 60.250 60.000 0.00 0.00 0.00 4.61
994 1127 1.418097 CCGTCCATCATCATCCCCCA 61.418 60.000 0.00 0.00 0.00 4.96
1140 1283 2.747855 CCGGGCAGCAAGGAGAAC 60.748 66.667 0.00 0.00 0.00 3.01
1178 1321 1.469940 CCAAGAGCACCAGTAGTAGCG 60.470 57.143 0.00 0.00 0.00 4.26
1200 1343 2.436646 CCAGACCAAATCGGCGCT 60.437 61.111 7.64 0.00 39.03 5.92
1250 1398 0.680061 AAGAGAGAACACGACCACCC 59.320 55.000 0.00 0.00 0.00 4.61
1311 1459 2.028020 AGTTCCGGTTCTTAGCAAGGAG 60.028 50.000 0.00 0.00 0.00 3.69
1312 1460 1.975680 AGTTCCGGTTCTTAGCAAGGA 59.024 47.619 0.00 0.00 0.00 3.36
1330 1478 4.395542 CGAACTACAGTCACTAGGCTAAGT 59.604 45.833 0.00 0.00 0.00 2.24
1335 1483 3.572604 AACGAACTACAGTCACTAGGC 57.427 47.619 0.00 0.00 0.00 3.93
1366 1514 3.694566 GACAATAGACCGAATGCCCTTTT 59.305 43.478 0.00 0.00 0.00 2.27
1367 1515 3.054361 AGACAATAGACCGAATGCCCTTT 60.054 43.478 0.00 0.00 0.00 3.11
1384 1532 6.560003 ACCATCCATCATGTAACTAGACAA 57.440 37.500 0.00 0.00 31.83 3.18
1401 1549 1.470098 CACAAGCAAGCACTACCATCC 59.530 52.381 0.00 0.00 0.00 3.51
1441 1589 2.884639 ACACTTCGATCCCAAAGGTTTG 59.115 45.455 0.00 0.00 37.90 2.93
1470 1618 1.684248 GGAGCTTCCATGAGCAACCAT 60.684 52.381 8.91 0.00 45.12 3.55
1476 1624 1.065564 AGAACAGGAGCTTCCATGAGC 60.066 52.381 0.00 0.00 39.61 4.26
1508 1656 1.679680 CCCTGCATGCCAGAAACATAG 59.320 52.381 16.68 1.79 44.64 2.23
1528 1676 4.786425 AGGAATTCAGGAGTTAGGATTGC 58.214 43.478 7.93 0.00 0.00 3.56
1536 1684 4.718774 TCTGAGCATAGGAATTCAGGAGTT 59.281 41.667 7.93 0.00 38.05 3.01
1547 1695 6.931281 GCATAACTTGTAATCTGAGCATAGGA 59.069 38.462 0.00 0.00 0.00 2.94
1562 1710 2.698855 ATCCGAGCTGCATAACTTGT 57.301 45.000 1.02 0.00 0.00 3.16
1610 1759 2.541120 GCTCGGCTGCTTAGCATGG 61.541 63.158 7.58 0.00 38.13 3.66
1622 1771 2.892784 ATCACTAGGTTAAGCTCGGC 57.107 50.000 11.11 0.00 0.00 5.54
1624 1773 6.804295 CAGCTATAATCACTAGGTTAAGCTCG 59.196 42.308 11.11 7.59 35.71 5.03
1633 1782 9.347934 CTCGATTAAACAGCTATAATCACTAGG 57.652 37.037 18.57 8.19 38.05 3.02
1639 1788 7.603651 TCTCCCTCGATTAAACAGCTATAATC 58.396 38.462 12.65 12.65 35.92 1.75
1661 1811 8.732746 AACTAGACACTAGATTCTCTCTTCTC 57.267 38.462 11.94 0.00 35.28 2.87
1731 1881 4.932799 TCCACACATCTATACCAAACGTTG 59.067 41.667 0.00 0.00 0.00 4.10
1795 1945 0.178995 TGCATGCCAGAAACACAGGA 60.179 50.000 16.68 0.00 0.00 3.86
1797 1947 1.933500 GCTTGCATGCCAGAAACACAG 60.934 52.381 22.19 2.43 0.00 3.66
1827 1977 4.350368 TCTGCGCATAATAATCCAGGAA 57.650 40.909 12.24 0.00 0.00 3.36
2235 2390 9.717942 GCACTCTTTGGATATAGTATCATTCTT 57.282 33.333 0.00 0.00 0.00 2.52
2243 2398 6.382859 TCCTTGTGCACTCTTTGGATATAGTA 59.617 38.462 19.41 0.00 0.00 1.82
2344 3399 3.054802 AGAAGGTGCTTGCTTATAGCTGT 60.055 43.478 0.00 0.00 42.97 4.40
2594 3788 7.233553 TCAGTTAATCTGCTATGTAGTATGCCT 59.766 37.037 0.00 0.00 43.32 4.75
2719 3913 8.879342 TTGACTTCTTATAATCTCTTAGCTGC 57.121 34.615 0.00 0.00 0.00 5.25
2803 3997 1.808945 CTCCAAGCAATCAGACCACAC 59.191 52.381 0.00 0.00 0.00 3.82
2839 4033 6.132791 TCTTTACCACGAGTGAAGCTATAG 57.867 41.667 4.59 0.00 40.88 1.31
2863 4057 6.657541 TGTCCTTCTTGTTTACTGTCAAGTTT 59.342 34.615 7.37 0.00 40.97 2.66
3084 4278 4.398044 AGAACTCAAACGAACCATTGTTGT 59.602 37.500 0.00 0.00 33.31 3.32
3515 4709 4.074259 ACATCAGCAGTAGCACATTTTCA 58.926 39.130 0.00 0.00 45.49 2.69
3516 4710 4.083110 ACACATCAGCAGTAGCACATTTTC 60.083 41.667 0.00 0.00 45.49 2.29
3517 4711 3.822735 ACACATCAGCAGTAGCACATTTT 59.177 39.130 0.00 0.00 45.49 1.82
3518 4712 3.415212 ACACATCAGCAGTAGCACATTT 58.585 40.909 0.00 0.00 45.49 2.32
3519 4713 3.063510 ACACATCAGCAGTAGCACATT 57.936 42.857 0.00 0.00 45.49 2.71
3520 4714 2.775911 ACACATCAGCAGTAGCACAT 57.224 45.000 0.00 0.00 45.49 3.21
3521 4715 2.353704 GGTACACATCAGCAGTAGCACA 60.354 50.000 0.00 0.00 45.49 4.57
3522 4716 2.093973 AGGTACACATCAGCAGTAGCAC 60.094 50.000 0.00 0.00 45.49 4.40
3523 4717 2.179427 AGGTACACATCAGCAGTAGCA 58.821 47.619 0.00 0.00 45.49 3.49
3524 4718 2.969628 AGGTACACATCAGCAGTAGC 57.030 50.000 0.00 0.00 42.56 3.58
3525 4719 4.997395 ACAAAAGGTACACATCAGCAGTAG 59.003 41.667 0.00 0.00 0.00 2.57
3589 5324 6.303839 TCCACAGCAAACTTAAGGACTAAAT 58.696 36.000 7.53 0.00 0.00 1.40
3598 5333 3.492102 AGCTCTCCACAGCAAACTTAA 57.508 42.857 0.00 0.00 42.40 1.85
3672 5408 3.379452 ACCAAACACTCCCAAAATCCAA 58.621 40.909 0.00 0.00 0.00 3.53
3719 5455 7.981102 AAAGAGGTGGAACTAACAATTCTAC 57.019 36.000 0.00 0.00 36.96 2.59
3763 5499 4.110036 AGTCACAAGTGCAAAAAGGAAC 57.890 40.909 0.00 0.00 0.00 3.62
3848 5584 2.414161 GCCATCGCAACCAAAGTAGTTC 60.414 50.000 0.00 0.00 34.03 3.01
3864 5600 5.350504 ACTGCCATACTATCTATGCCATC 57.649 43.478 0.00 0.00 0.00 3.51
4262 6126 7.068839 TGTCTCCATTCTATTCTAGAACCACTC 59.931 40.741 7.48 0.00 46.58 3.51
4290 6154 2.206750 GTGGTGAGCAGTAAAACGTGA 58.793 47.619 0.00 0.00 0.00 4.35
4309 6173 1.394917 GATGCGAGCAGTTTGATTCGT 59.605 47.619 3.58 0.00 35.61 3.85
4316 6180 1.067142 TCTAACGGATGCGAGCAGTTT 60.067 47.619 15.49 0.00 0.00 2.66
4356 6220 9.392506 TGAATTGGACCTATAGATCAATCCTAA 57.607 33.333 0.00 0.00 0.00 2.69
4357 6221 8.972662 TGAATTGGACCTATAGATCAATCCTA 57.027 34.615 0.00 0.00 0.00 2.94
4358 6222 7.878621 TGAATTGGACCTATAGATCAATCCT 57.121 36.000 0.00 0.00 0.00 3.24
4412 6276 9.733907 AGGGTAAACCAACTATTTCTATACCTA 57.266 33.333 0.81 0.00 43.89 3.08
4413 6277 8.491958 CAGGGTAAACCAACTATTTCTATACCT 58.508 37.037 0.81 0.00 43.89 3.08
4414 6278 7.718314 CCAGGGTAAACCAACTATTTCTATACC 59.282 40.741 0.81 0.00 43.89 2.73
4415 6279 8.270030 ACCAGGGTAAACCAACTATTTCTATAC 58.730 37.037 0.81 0.00 43.89 1.47
4445 6529 1.281577 TGGATGCAGCACTCATGGTAA 59.718 47.619 3.51 0.00 33.82 2.85
4469 6553 5.814188 TCATGTCATGACAAAGTATGAGCTC 59.186 40.000 31.00 6.82 45.41 4.09
4492 6585 3.242673 GCAGTGCTTGTGATAGCTTCATC 60.243 47.826 8.18 0.00 41.76 2.92
4513 6606 1.748493 TGGTTTTGTGTCAAGTCCTGC 59.252 47.619 0.00 0.00 0.00 4.85
4556 8553 8.177663 CAGAAGCAATACTGGTTAGTTACATTG 58.822 37.037 0.00 0.00 43.24 2.82
4602 8611 5.812127 CCTGCAAAAAGGCCATAATTTAGAC 59.188 40.000 5.01 0.00 0.00 2.59
4754 8763 4.082665 ACTGGCAATCTCAGGTATCATG 57.917 45.455 0.00 0.00 36.62 3.07
4789 8798 6.527023 CCGTTTGTTAAAATGTACACACACAA 59.473 34.615 0.00 0.84 37.54 3.33
4860 8879 1.608590 CCAACAACAAAGATCGGCTGT 59.391 47.619 0.00 0.00 0.00 4.40
4964 8986 2.224892 TGATACTCCCTCCGATCCAGAG 60.225 54.545 1.19 1.19 0.00 3.35
4966 8988 2.294449 TGATACTCCCTCCGATCCAG 57.706 55.000 0.00 0.00 0.00 3.86
5087 9110 8.513774 GGTTATCGGAAAAATGTAACTTTGGTA 58.486 33.333 0.00 0.00 0.00 3.25
5097 9120 6.264518 ACTTTGACAGGTTATCGGAAAAATGT 59.735 34.615 0.00 0.00 0.00 2.71
5104 9127 3.616560 GCAGACTTTGACAGGTTATCGGA 60.617 47.826 0.00 0.00 0.00 4.55
5116 9139 3.540617 TGCACTTGTTAGCAGACTTTGA 58.459 40.909 0.00 0.00 35.51 2.69
5117 9140 3.969117 TGCACTTGTTAGCAGACTTTG 57.031 42.857 0.00 0.00 35.51 2.77
5126 9149 1.516161 TCTGCTGCTGCACTTGTTAG 58.484 50.000 14.93 3.31 45.31 2.34
5127 9150 2.189594 ATCTGCTGCTGCACTTGTTA 57.810 45.000 14.93 0.00 45.31 2.41
5131 9154 0.038526 GCAAATCTGCTGCTGCACTT 60.039 50.000 14.93 8.35 45.31 3.16
5132 9155 1.585006 GCAAATCTGCTGCTGCACT 59.415 52.632 14.93 2.07 45.31 4.40
5133 9156 4.164252 GCAAATCTGCTGCTGCAC 57.836 55.556 14.93 0.00 45.31 4.57
5172 9195 3.772025 AGAACCAGAGGGAGTACTTCATG 59.228 47.826 2.92 0.00 38.05 3.07
5183 9206 3.753797 GCAGAGTAAAAAGAACCAGAGGG 59.246 47.826 0.00 0.00 41.29 4.30
5184 9207 4.389374 TGCAGAGTAAAAAGAACCAGAGG 58.611 43.478 0.00 0.00 0.00 3.69
5185 9208 7.856145 ATATGCAGAGTAAAAAGAACCAGAG 57.144 36.000 0.00 0.00 0.00 3.35
5186 9209 9.383519 CTTATATGCAGAGTAAAAAGAACCAGA 57.616 33.333 0.00 0.00 0.00 3.86
5187 9210 9.383519 TCTTATATGCAGAGTAAAAAGAACCAG 57.616 33.333 0.00 0.00 0.00 4.00
5188 9211 9.733556 TTCTTATATGCAGAGTAAAAAGAACCA 57.266 29.630 0.00 0.00 29.39 3.67
5209 9232 9.321562 ACGAAGTTTGACTTTAGACAATTCTTA 57.678 29.630 0.00 0.00 37.78 2.10
5210 9233 8.209917 ACGAAGTTTGACTTTAGACAATTCTT 57.790 30.769 0.00 10.10 37.78 2.52
5211 9234 7.787725 ACGAAGTTTGACTTTAGACAATTCT 57.212 32.000 0.00 0.00 37.78 2.40
5212 9235 9.925268 TTTACGAAGTTTGACTTTAGACAATTC 57.075 29.630 0.00 0.00 37.78 2.17
5213 9236 9.931210 CTTTACGAAGTTTGACTTTAGACAATT 57.069 29.630 0.00 0.00 37.78 2.32
5214 9237 9.106070 ACTTTACGAAGTTTGACTTTAGACAAT 57.894 29.630 0.00 0.00 43.48 2.71
5215 9238 8.483307 ACTTTACGAAGTTTGACTTTAGACAA 57.517 30.769 0.00 0.00 43.48 3.18
5291 9314 8.911662 GCGTTGTGACTTAAATTTTCATATTGT 58.088 29.630 0.00 0.00 0.00 2.71
5292 9315 8.910666 TGCGTTGTGACTTAAATTTTCATATTG 58.089 29.630 0.00 0.00 0.00 1.90
5293 9316 9.638239 ATGCGTTGTGACTTAAATTTTCATATT 57.362 25.926 0.00 0.00 0.00 1.28
5294 9317 9.289303 GATGCGTTGTGACTTAAATTTTCATAT 57.711 29.630 0.00 0.00 0.00 1.78
5295 9318 8.511321 AGATGCGTTGTGACTTAAATTTTCATA 58.489 29.630 0.00 0.00 0.00 2.15
5296 9319 7.370383 AGATGCGTTGTGACTTAAATTTTCAT 58.630 30.769 0.00 0.00 0.00 2.57
5297 9320 6.734137 AGATGCGTTGTGACTTAAATTTTCA 58.266 32.000 0.00 0.00 0.00 2.69
5298 9321 8.722342 TTAGATGCGTTGTGACTTAAATTTTC 57.278 30.769 0.00 0.00 0.00 2.29
5299 9322 9.128107 CATTAGATGCGTTGTGACTTAAATTTT 57.872 29.630 0.00 0.00 0.00 1.82
5300 9323 8.511321 TCATTAGATGCGTTGTGACTTAAATTT 58.489 29.630 0.00 0.00 0.00 1.82
5301 9324 8.039603 TCATTAGATGCGTTGTGACTTAAATT 57.960 30.769 0.00 0.00 0.00 1.82
5302 9325 7.609760 TCATTAGATGCGTTGTGACTTAAAT 57.390 32.000 0.00 0.00 0.00 1.40
5303 9326 7.609760 ATCATTAGATGCGTTGTGACTTAAA 57.390 32.000 0.00 0.00 31.91 1.52
5304 9327 8.710835 TTATCATTAGATGCGTTGTGACTTAA 57.289 30.769 0.00 0.00 35.67 1.85
5305 9328 8.764287 CATTATCATTAGATGCGTTGTGACTTA 58.236 33.333 0.00 0.00 35.67 2.24
5306 9329 7.495606 TCATTATCATTAGATGCGTTGTGACTT 59.504 33.333 0.00 0.00 35.67 3.01
5307 9330 6.986231 TCATTATCATTAGATGCGTTGTGACT 59.014 34.615 0.00 0.00 35.67 3.41
5308 9331 7.177498 TCATTATCATTAGATGCGTTGTGAC 57.823 36.000 0.00 0.00 35.67 3.67
5309 9332 7.967890 ATCATTATCATTAGATGCGTTGTGA 57.032 32.000 0.00 0.00 35.67 3.58
5310 9333 9.110617 GAAATCATTATCATTAGATGCGTTGTG 57.889 33.333 0.00 0.00 35.67 3.33
5311 9334 8.839343 TGAAATCATTATCATTAGATGCGTTGT 58.161 29.630 0.00 0.00 35.67 3.32
5312 9335 9.110617 GTGAAATCATTATCATTAGATGCGTTG 57.889 33.333 0.00 0.00 35.67 4.10
5313 9336 8.839343 TGTGAAATCATTATCATTAGATGCGTT 58.161 29.630 0.00 0.00 35.67 4.84
5314 9337 8.382030 TGTGAAATCATTATCATTAGATGCGT 57.618 30.769 0.00 0.00 35.67 5.24
5315 9338 9.836076 AATGTGAAATCATTATCATTAGATGCG 57.164 29.630 0.00 0.00 36.44 4.73
5392 9415 9.722056 GTTCGCATATAAGATTTGTCTGAAATT 57.278 29.630 0.00 0.00 0.00 1.82
5393 9416 9.113838 AGTTCGCATATAAGATTTGTCTGAAAT 57.886 29.630 0.00 0.00 0.00 2.17
5394 9417 8.492673 AGTTCGCATATAAGATTTGTCTGAAA 57.507 30.769 0.00 0.00 0.00 2.69
5395 9418 9.249457 CTAGTTCGCATATAAGATTTGTCTGAA 57.751 33.333 0.00 0.00 0.00 3.02
5396 9419 8.414003 ACTAGTTCGCATATAAGATTTGTCTGA 58.586 33.333 0.00 0.00 0.00 3.27
5397 9420 8.581057 ACTAGTTCGCATATAAGATTTGTCTG 57.419 34.615 0.00 0.00 0.00 3.51
5428 9451 8.854117 CCCCATTAAAGAATACTACTACGTACT 58.146 37.037 0.00 0.00 0.00 2.73
5429 9452 8.084684 CCCCCATTAAAGAATACTACTACGTAC 58.915 40.741 0.00 0.00 0.00 3.67
5430 9453 7.784550 ACCCCCATTAAAGAATACTACTACGTA 59.215 37.037 0.00 0.00 0.00 3.57
5431 9454 6.612863 ACCCCCATTAAAGAATACTACTACGT 59.387 38.462 0.00 0.00 0.00 3.57
5432 9455 7.059202 ACCCCCATTAAAGAATACTACTACG 57.941 40.000 0.00 0.00 0.00 3.51
5433 9456 9.770097 GTTACCCCCATTAAAGAATACTACTAC 57.230 37.037 0.00 0.00 0.00 2.73
5434 9457 9.504705 TGTTACCCCCATTAAAGAATACTACTA 57.495 33.333 0.00 0.00 0.00 1.82
5435 9458 8.396619 TGTTACCCCCATTAAAGAATACTACT 57.603 34.615 0.00 0.00 0.00 2.57
5436 9459 9.636789 ATTGTTACCCCCATTAAAGAATACTAC 57.363 33.333 0.00 0.00 0.00 2.73
5437 9460 9.635404 CATTGTTACCCCCATTAAAGAATACTA 57.365 33.333 0.00 0.00 0.00 1.82
5438 9461 8.340757 TCATTGTTACCCCCATTAAAGAATACT 58.659 33.333 0.00 0.00 0.00 2.12
5439 9462 8.528044 TCATTGTTACCCCCATTAAAGAATAC 57.472 34.615 0.00 0.00 0.00 1.89
5440 9463 9.196139 CTTCATTGTTACCCCCATTAAAGAATA 57.804 33.333 0.00 0.00 0.00 1.75
5441 9464 7.678171 ACTTCATTGTTACCCCCATTAAAGAAT 59.322 33.333 0.00 0.00 0.00 2.40
5442 9465 7.013834 ACTTCATTGTTACCCCCATTAAAGAA 58.986 34.615 0.00 0.00 0.00 2.52
5443 9466 6.557568 ACTTCATTGTTACCCCCATTAAAGA 58.442 36.000 0.00 0.00 0.00 2.52
5444 9467 6.850752 ACTTCATTGTTACCCCCATTAAAG 57.149 37.500 0.00 0.00 0.00 1.85
5445 9468 6.893005 CCTACTTCATTGTTACCCCCATTAAA 59.107 38.462 0.00 0.00 0.00 1.52
5446 9469 6.217900 TCCTACTTCATTGTTACCCCCATTAA 59.782 38.462 0.00 0.00 0.00 1.40
5447 9470 5.732170 TCCTACTTCATTGTTACCCCCATTA 59.268 40.000 0.00 0.00 0.00 1.90
5448 9471 4.542525 TCCTACTTCATTGTTACCCCCATT 59.457 41.667 0.00 0.00 0.00 3.16
5452 9475 3.054655 TGCTCCTACTTCATTGTTACCCC 60.055 47.826 0.00 0.00 0.00 4.95
5453 9476 4.192317 CTGCTCCTACTTCATTGTTACCC 58.808 47.826 0.00 0.00 0.00 3.69
5457 9480 4.899352 AGACTGCTCCTACTTCATTGTT 57.101 40.909 0.00 0.00 0.00 2.83
5462 9485 6.373759 TGGATTATAGACTGCTCCTACTTCA 58.626 40.000 0.00 0.00 0.00 3.02
5464 9487 6.239064 CGTTGGATTATAGACTGCTCCTACTT 60.239 42.308 0.00 0.00 32.03 2.24
5466 9489 5.241064 TCGTTGGATTATAGACTGCTCCTAC 59.759 44.000 0.00 0.00 0.00 3.18
5467 9490 5.382616 TCGTTGGATTATAGACTGCTCCTA 58.617 41.667 0.00 0.00 0.00 2.94
5468 9491 4.215908 TCGTTGGATTATAGACTGCTCCT 58.784 43.478 0.00 0.00 0.00 3.69
5470 9493 5.440234 TCTCGTTGGATTATAGACTGCTC 57.560 43.478 0.00 0.00 0.00 4.26
5476 9499 6.321435 TGAAGAGCTTCTCGTTGGATTATAGA 59.679 38.462 11.16 0.00 40.14 1.98
5478 9501 6.465439 TGAAGAGCTTCTCGTTGGATTATA 57.535 37.500 11.16 0.00 40.14 0.98
5481 9504 3.685139 TGAAGAGCTTCTCGTTGGATT 57.315 42.857 11.16 0.00 40.14 3.01
5482 9505 3.055530 ACATGAAGAGCTTCTCGTTGGAT 60.056 43.478 11.16 0.00 40.14 3.41
5483 9506 2.300152 ACATGAAGAGCTTCTCGTTGGA 59.700 45.455 11.16 0.00 40.14 3.53
5484 9507 2.414481 CACATGAAGAGCTTCTCGTTGG 59.586 50.000 11.16 0.00 40.14 3.77
5485 9508 2.159734 GCACATGAAGAGCTTCTCGTTG 60.160 50.000 11.16 6.64 40.14 4.10
5486 9509 2.072298 GCACATGAAGAGCTTCTCGTT 58.928 47.619 11.16 0.00 40.14 3.85
5487 9510 1.274728 AGCACATGAAGAGCTTCTCGT 59.725 47.619 11.16 5.74 41.66 4.18
5488 9511 1.659601 CAGCACATGAAGAGCTTCTCG 59.340 52.381 11.16 5.19 41.66 4.04
5489 9512 1.397692 GCAGCACATGAAGAGCTTCTC 59.602 52.381 11.16 0.00 41.66 2.87
5490 9513 1.451067 GCAGCACATGAAGAGCTTCT 58.549 50.000 11.16 0.00 41.66 2.85
5491 9514 0.096628 CGCAGCACATGAAGAGCTTC 59.903 55.000 0.00 3.32 41.66 3.86
5493 9516 1.004080 ACGCAGCACATGAAGAGCT 60.004 52.632 0.00 0.00 45.48 4.09
5494 9517 1.423056 GACGCAGCACATGAAGAGC 59.577 57.895 0.00 0.00 0.00 4.09
5495 9518 0.733909 TCGACGCAGCACATGAAGAG 60.734 55.000 0.00 0.00 0.00 2.85
5496 9519 0.108662 ATCGACGCAGCACATGAAGA 60.109 50.000 0.00 0.00 0.00 2.87
5500 9523 0.025898 CTGAATCGACGCAGCACATG 59.974 55.000 3.72 0.00 0.00 3.21
5502 9525 0.599991 AACTGAATCGACGCAGCACA 60.600 50.000 14.36 0.00 35.57 4.57
5503 9526 0.512952 AAACTGAATCGACGCAGCAC 59.487 50.000 14.36 0.00 35.57 4.40
5504 9527 1.194547 GAAAACTGAATCGACGCAGCA 59.805 47.619 14.36 0.00 35.57 4.41
5505 9528 1.194547 TGAAAACTGAATCGACGCAGC 59.805 47.619 14.36 1.84 35.57 5.25
5506 9529 2.476619 AGTGAAAACTGAATCGACGCAG 59.523 45.455 13.19 13.19 38.10 5.18
5508 9531 3.521524 AAGTGAAAACTGAATCGACGC 57.478 42.857 0.00 0.00 0.00 5.19
5509 9532 5.498159 TGAAAAGTGAAAACTGAATCGACG 58.502 37.500 0.00 0.00 0.00 5.12
5510 9533 7.272515 TGTTTGAAAAGTGAAAACTGAATCGAC 59.727 33.333 0.00 0.00 35.35 4.20
5513 9536 8.238481 TGTGTTTGAAAAGTGAAAACTGAATC 57.762 30.769 0.00 0.00 35.35 2.52
5514 9537 8.658609 CATGTGTTTGAAAAGTGAAAACTGAAT 58.341 29.630 0.00 0.00 35.35 2.57
5515 9538 7.359933 GCATGTGTTTGAAAAGTGAAAACTGAA 60.360 33.333 0.00 0.00 35.35 3.02
5516 9539 6.090628 GCATGTGTTTGAAAAGTGAAAACTGA 59.909 34.615 0.00 0.00 35.35 3.41
5517 9540 6.128607 TGCATGTGTTTGAAAAGTGAAAACTG 60.129 34.615 0.00 0.00 35.35 3.16
5518 9541 5.931146 TGCATGTGTTTGAAAAGTGAAAACT 59.069 32.000 0.00 0.00 35.35 2.66
5519 9542 6.163159 TGCATGTGTTTGAAAAGTGAAAAC 57.837 33.333 0.00 0.00 34.97 2.43
5521 9544 5.523188 GGATGCATGTGTTTGAAAAGTGAAA 59.477 36.000 2.46 0.00 0.00 2.69
5522 9545 5.049167 GGATGCATGTGTTTGAAAAGTGAA 58.951 37.500 2.46 0.00 0.00 3.18
5523 9546 4.341806 AGGATGCATGTGTTTGAAAAGTGA 59.658 37.500 2.46 0.00 0.00 3.41
5524 9547 4.624015 AGGATGCATGTGTTTGAAAAGTG 58.376 39.130 2.46 0.00 0.00 3.16
5525 9548 4.942761 AGGATGCATGTGTTTGAAAAGT 57.057 36.364 2.46 0.00 0.00 2.66
5526 9549 6.038356 GGATAGGATGCATGTGTTTGAAAAG 58.962 40.000 2.46 0.00 0.00 2.27
5528 9551 5.263599 AGGATAGGATGCATGTGTTTGAAA 58.736 37.500 2.46 0.00 0.00 2.69
5530 9553 4.508551 AGGATAGGATGCATGTGTTTGA 57.491 40.909 2.46 0.00 0.00 2.69
5531 9554 6.236409 AGATAGGATAGGATGCATGTGTTTG 58.764 40.000 2.46 0.00 0.00 2.93
5532 9555 6.445451 AGATAGGATAGGATGCATGTGTTT 57.555 37.500 2.46 0.00 0.00 2.83
5533 9556 6.498303 TGTAGATAGGATAGGATGCATGTGTT 59.502 38.462 2.46 0.00 0.00 3.32
5534 9557 6.019108 TGTAGATAGGATAGGATGCATGTGT 58.981 40.000 2.46 0.00 0.00 3.72
5535 9558 6.336566 GTGTAGATAGGATAGGATGCATGTG 58.663 44.000 2.46 0.00 0.00 3.21
5537 9560 5.451103 CGGTGTAGATAGGATAGGATGCATG 60.451 48.000 2.46 0.00 0.00 4.06
5538 9561 4.646945 CGGTGTAGATAGGATAGGATGCAT 59.353 45.833 0.00 0.00 0.00 3.96
5541 9564 5.710567 TCAACGGTGTAGATAGGATAGGATG 59.289 44.000 0.00 0.00 0.00 3.51
5542 9565 5.888901 TCAACGGTGTAGATAGGATAGGAT 58.111 41.667 0.00 0.00 0.00 3.24
5543 9566 5.314718 TCAACGGTGTAGATAGGATAGGA 57.685 43.478 0.00 0.00 0.00 2.94
5544 9567 5.710567 TCATCAACGGTGTAGATAGGATAGG 59.289 44.000 0.00 0.00 0.00 2.57
5545 9568 6.819397 TCATCAACGGTGTAGATAGGATAG 57.181 41.667 0.00 0.00 0.00 2.08
5547 9570 6.570571 CGATTCATCAACGGTGTAGATAGGAT 60.571 42.308 0.00 0.00 0.00 3.24
5548 9571 5.278315 CGATTCATCAACGGTGTAGATAGGA 60.278 44.000 0.00 0.00 0.00 2.94
5549 9572 4.917998 CGATTCATCAACGGTGTAGATAGG 59.082 45.833 0.00 0.00 0.00 2.57
5550 9573 4.917998 CCGATTCATCAACGGTGTAGATAG 59.082 45.833 0.00 0.00 41.47 2.08
5552 9575 3.717707 CCGATTCATCAACGGTGTAGAT 58.282 45.455 0.00 0.00 41.47 1.98
5553 9576 2.737359 GCCGATTCATCAACGGTGTAGA 60.737 50.000 0.00 0.00 46.95 2.59
5554 9577 1.593006 GCCGATTCATCAACGGTGTAG 59.407 52.381 0.00 0.00 46.95 2.74
5557 9580 0.374758 CTGCCGATTCATCAACGGTG 59.625 55.000 0.00 0.00 46.95 4.94
5558 9581 0.249120 TCTGCCGATTCATCAACGGT 59.751 50.000 0.00 0.00 46.95 4.83
5560 9583 2.270923 TCTTCTGCCGATTCATCAACG 58.729 47.619 0.00 0.00 0.00 4.10
5561 9584 4.260948 GGATTCTTCTGCCGATTCATCAAC 60.261 45.833 0.00 0.00 0.00 3.18
5563 9586 3.470709 GGATTCTTCTGCCGATTCATCA 58.529 45.455 0.00 0.00 0.00 3.07
5572 9595 1.594862 CATCGAACGGATTCTTCTGCC 59.405 52.381 0.00 0.00 31.28 4.85
5573 9596 2.271800 ACATCGAACGGATTCTTCTGC 58.728 47.619 0.00 0.00 31.28 4.26
5574 9597 3.775202 AGACATCGAACGGATTCTTCTG 58.225 45.455 0.00 0.00 31.28 3.02
5575 9598 4.035278 GAGACATCGAACGGATTCTTCT 57.965 45.455 0.00 0.00 31.28 2.85
5589 9612 0.091344 CGTGCGTTTGTCGAGACATC 59.909 55.000 6.77 3.35 41.52 3.06
5590 9613 1.886861 GCGTGCGTTTGTCGAGACAT 61.887 55.000 6.77 0.00 41.52 3.06
5591 9614 2.582265 GCGTGCGTTTGTCGAGACA 61.582 57.895 1.24 1.24 42.86 3.41
5592 9615 2.167918 GCGTGCGTTTGTCGAGAC 59.832 61.111 0.00 0.00 42.86 3.36
5593 9616 3.391631 CGCGTGCGTTTGTCGAGA 61.392 61.111 6.00 0.00 42.86 4.04
5614 9637 1.140375 GCGAGTACCTACCCGTTGG 59.860 63.158 0.00 0.00 37.80 3.77
5615 9638 1.226491 CGCGAGTACCTACCCGTTG 60.226 63.158 0.00 0.00 29.70 4.10
5616 9639 3.056313 GCGCGAGTACCTACCCGTT 62.056 63.158 12.10 0.00 29.70 4.44
5617 9640 3.512516 GCGCGAGTACCTACCCGT 61.513 66.667 12.10 0.00 29.70 5.28
5618 9641 3.178569 GAGCGCGAGTACCTACCCG 62.179 68.421 12.10 0.00 0.00 5.28
5619 9642 2.720605 GAGCGCGAGTACCTACCC 59.279 66.667 12.10 0.00 0.00 3.69
5620 9643 2.327244 CGAGCGCGAGTACCTACC 59.673 66.667 12.10 0.00 40.82 3.18
5621 9644 2.352115 GCGAGCGCGAGTACCTAC 60.352 66.667 15.92 0.00 40.82 3.18
5645 9668 3.524606 TAGGTCGCAGCTACCCGC 61.525 66.667 12.50 0.00 37.77 6.13
5646 9669 2.412112 GTAGGTCGCAGCTACCCG 59.588 66.667 12.50 0.00 41.86 5.28
5649 9672 0.667453 GGTAGGTAGGTCGCAGCTAC 59.333 60.000 13.67 13.67 45.65 3.58
5650 9673 0.816825 CGGTAGGTAGGTCGCAGCTA 60.817 60.000 0.00 0.00 0.00 3.32
5651 9674 2.119655 CGGTAGGTAGGTCGCAGCT 61.120 63.158 0.00 0.00 0.00 4.24
5652 9675 2.412112 CGGTAGGTAGGTCGCAGC 59.588 66.667 0.00 0.00 0.00 5.25
5653 9676 3.117372 CCGGTAGGTAGGTCGCAG 58.883 66.667 0.00 0.00 0.00 5.18
5654 9677 3.142838 GCCGGTAGGTAGGTCGCA 61.143 66.667 1.90 0.00 40.50 5.10
5655 9678 4.261781 CGCCGGTAGGTAGGTCGC 62.262 72.222 1.90 0.00 40.50 5.19
5656 9679 3.589881 CCGCCGGTAGGTAGGTCG 61.590 72.222 1.90 0.00 40.50 4.79
5657 9680 3.909285 GCCGCCGGTAGGTAGGTC 61.909 72.222 17.36 0.00 38.87 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.