Multiple sequence alignment - TraesCS7D01G460900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G460900 chr7D 100.000 4421 0 0 1 4421 577326088 577321668 0.000000e+00 8165
1 TraesCS7D01G460900 chr7D 87.264 212 23 4 3848 4057 592974424 592974633 5.710000e-59 239
2 TraesCS7D01G460900 chr7A 90.028 3630 174 75 112 3640 669555275 669551733 0.000000e+00 4525
3 TraesCS7D01G460900 chr7A 89.863 365 29 4 4065 4421 669551724 669551360 3.120000e-126 462
4 TraesCS7D01G460900 chr7A 92.174 115 7 2 4 118 669595600 669595488 1.270000e-35 161
5 TraesCS7D01G460900 chr7B 88.822 3632 198 76 3 3572 640778767 640775282 0.000000e+00 4266
6 TraesCS7D01G460900 chr7B 87.907 215 23 3 3848 4061 6125945 6125733 2.640000e-62 250
7 TraesCS7D01G460900 chr2B 77.601 567 113 12 8 568 780499381 780498823 9.170000e-87 331
8 TraesCS7D01G460900 chr3D 74.730 649 134 23 2 643 21588111 21588736 3.390000e-66 263
9 TraesCS7D01G460900 chr2D 89.372 207 22 0 3848 4054 607662910 607662704 1.220000e-65 261
10 TraesCS7D01G460900 chr6D 87.500 208 24 2 3848 4054 456332503 456332297 5.710000e-59 239
11 TraesCS7D01G460900 chr6D 85.514 214 28 3 3848 4058 471509549 471509336 2.070000e-53 220
12 TraesCS7D01G460900 chr6B 87.019 208 24 3 3848 4054 682642967 682642762 9.560000e-57 231
13 TraesCS7D01G460900 chr6B 86.256 211 23 5 3847 4056 629583037 629582832 1.600000e-54 224
14 TraesCS7D01G460900 chr1B 85.915 213 29 1 3848 4060 577031988 577032199 4.450000e-55 226
15 TraesCS7D01G460900 chr4D 86.124 209 28 1 3848 4056 507761812 507761605 1.600000e-54 224


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G460900 chr7D 577321668 577326088 4420 True 8165.0 8165 100.0000 1 4421 1 chr7D.!!$R1 4420
1 TraesCS7D01G460900 chr7A 669551360 669555275 3915 True 2493.5 4525 89.9455 112 4421 2 chr7A.!!$R2 4309
2 TraesCS7D01G460900 chr7B 640775282 640778767 3485 True 4266.0 4266 88.8220 3 3572 1 chr7B.!!$R2 3569
3 TraesCS7D01G460900 chr2B 780498823 780499381 558 True 331.0 331 77.6010 8 568 1 chr2B.!!$R1 560
4 TraesCS7D01G460900 chr3D 21588111 21588736 625 False 263.0 263 74.7300 2 643 1 chr3D.!!$F1 641

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
980 1039 0.250209 CATGGCTCGGATCCAAGGAG 60.250 60.0 13.41 11.44 37.13 3.69 F
1750 1842 1.025113 CACGAGGTAGGCTCAGTCGA 61.025 60.0 16.36 0.00 34.72 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1782 1877 0.670162 CCCGGATCATTCATGCCAAC 59.330 55.0 0.73 0.0 0.00 3.77 R
3745 3896 0.108019 GGTCGAGTTGGGTCACCTTT 59.892 55.0 0.00 0.0 37.76 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 1.219522 CGAGTTGGTGGTGGTTCGAC 61.220 60.000 0.00 0.00 0.00 4.20
73 74 1.780503 TGGCCTGATCTCATCTTCGA 58.219 50.000 3.32 0.00 0.00 3.71
86 87 3.521529 CTTCGATAGCCTGCCCGGG 62.522 68.421 19.09 19.09 0.00 5.73
87 88 4.533124 TCGATAGCCTGCCCGGGA 62.533 66.667 29.31 8.79 0.00 5.14
278 283 4.225042 TGACATTCTACCTTGCCACTACAT 59.775 41.667 0.00 0.00 0.00 2.29
283 288 0.673644 ACCTTGCCACTACATGCGAC 60.674 55.000 0.00 0.00 0.00 5.19
313 318 2.159544 TGTGGTCGGTTTTTCGTTTCAC 60.160 45.455 0.00 0.00 0.00 3.18
314 319 2.082231 TGGTCGGTTTTTCGTTTCACA 58.918 42.857 0.00 0.00 0.00 3.58
413 418 3.712881 GGTGCGGCACTCGTCAAC 61.713 66.667 29.92 10.03 41.72 3.18
417 422 2.967397 CGGCACTCGTCAACCCTA 59.033 61.111 0.00 0.00 0.00 3.53
510 516 4.124238 GGTAGTCGGCAGCATAATACAAA 58.876 43.478 0.00 0.00 0.00 2.83
534 540 2.446036 GGTGCCCTCCTCCCGTAT 60.446 66.667 0.00 0.00 0.00 3.06
594 603 1.648720 CAACGGGTTGTGTGCTCTG 59.351 57.895 3.41 0.00 35.92 3.35
617 628 2.540157 GCCACAACACGTTACCTTTGAC 60.540 50.000 0.00 0.00 0.00 3.18
622 633 4.093850 ACAACACGTTACCTTTGACTTGTC 59.906 41.667 0.00 0.00 29.39 3.18
633 647 4.564406 CCTTTGACTTGTCCTACTGAGCAT 60.564 45.833 0.00 0.00 0.00 3.79
652 666 8.094798 TGAGCATTTTGTATCTTTACTTTCGT 57.905 30.769 0.00 0.00 0.00 3.85
694 708 2.436417 ACAATTCTGACCGGTTGATGG 58.564 47.619 9.42 0.76 0.00 3.51
696 710 0.744414 ATTCTGACCGGTTGATGGCG 60.744 55.000 9.42 0.00 0.00 5.69
707 721 3.606346 CGGTTGATGGCGTTGTTAATTTC 59.394 43.478 0.00 0.00 0.00 2.17
708 722 3.606346 GGTTGATGGCGTTGTTAATTTCG 59.394 43.478 0.00 0.00 0.00 3.46
711 750 4.861210 TGATGGCGTTGTTAATTTCGTTT 58.139 34.783 0.00 0.00 0.00 3.60
720 759 7.891723 GCGTTGTTAATTTCGTTTAAAACAACA 59.108 29.630 24.00 12.56 41.83 3.33
730 769 8.437443 TTCGTTTAAAACAACAGTAGTGTTTG 57.563 30.769 13.37 11.22 45.00 2.93
744 784 9.555727 ACAGTAGTGTTTGTCATTACAAGTAAT 57.444 29.630 0.00 0.00 45.99 1.89
818 858 3.266254 TGTAGGTAGCACAGTAGAGAGGT 59.734 47.826 0.00 0.00 0.00 3.85
824 864 1.203523 GCACAGTAGAGAGGTCACTGG 59.796 57.143 5.98 0.00 43.18 4.00
980 1039 0.250209 CATGGCTCGGATCCAAGGAG 60.250 60.000 13.41 11.44 37.13 3.69
1034 1093 4.163078 CCCACATCTTCTTCTAGTCCACAT 59.837 45.833 0.00 0.00 0.00 3.21
1184 1246 2.612251 CCTCCTCCTCCTCCTCCC 59.388 72.222 0.00 0.00 0.00 4.30
1444 1527 4.329545 GGACCACCCGCTGCTGAA 62.330 66.667 0.00 0.00 0.00 3.02
1445 1528 2.281484 GACCACCCGCTGCTGAAA 60.281 61.111 0.00 0.00 0.00 2.69
1513 1605 2.571757 CACCTTCCGTGCTAGCGA 59.428 61.111 10.77 0.00 35.18 4.93
1537 1629 2.737376 GTCGGGCAACTCCACGAC 60.737 66.667 1.00 1.00 44.78 4.34
1740 1832 2.813908 GCAACGGCCACGAGGTAG 60.814 66.667 2.24 0.00 44.60 3.18
1741 1833 2.125673 CAACGGCCACGAGGTAGG 60.126 66.667 2.24 0.00 44.60 3.18
1747 1839 4.019983 CCACGAGGTAGGCTCAGT 57.980 61.111 0.00 0.00 0.00 3.41
1748 1840 1.810532 CCACGAGGTAGGCTCAGTC 59.189 63.158 0.00 0.00 0.00 3.51
1749 1841 1.429825 CACGAGGTAGGCTCAGTCG 59.570 63.158 9.88 9.88 36.71 4.18
1750 1842 1.025113 CACGAGGTAGGCTCAGTCGA 61.025 60.000 16.36 0.00 34.72 4.20
1751 1843 1.025647 ACGAGGTAGGCTCAGTCGAC 61.026 60.000 7.70 7.70 34.72 4.20
1752 1844 1.716826 CGAGGTAGGCTCAGTCGACC 61.717 65.000 13.01 0.00 32.32 4.79
1775 1867 5.007430 CCTCATCGTTTCTTCTCCATCAATG 59.993 44.000 0.00 0.00 0.00 2.82
1777 1872 6.351711 TCATCGTTTCTTCTCCATCAATGAT 58.648 36.000 0.00 0.00 0.00 2.45
1782 1877 6.457934 CGTTTCTTCTCCATCAATGATCTTGG 60.458 42.308 0.00 0.00 0.00 3.61
1784 1879 6.070951 TCTTCTCCATCAATGATCTTGGTT 57.929 37.500 0.00 0.00 0.00 3.67
1928 2037 0.604578 GGTAGTACTGGTCCGTTGCA 59.395 55.000 5.39 0.00 0.00 4.08
1929 2038 1.403780 GGTAGTACTGGTCCGTTGCAG 60.404 57.143 5.39 0.00 0.00 4.41
1930 2039 0.245539 TAGTACTGGTCCGTTGCAGC 59.754 55.000 5.39 0.00 0.00 5.25
1931 2040 2.033194 GTACTGGTCCGTTGCAGCC 61.033 63.158 0.00 0.00 0.00 4.85
1932 2041 2.512355 TACTGGTCCGTTGCAGCCA 61.512 57.895 0.00 0.00 0.00 4.75
2163 2272 2.022035 ACTCCCACTCTTCCATCCCATA 60.022 50.000 0.00 0.00 0.00 2.74
2164 2273 3.254960 CTCCCACTCTTCCATCCCATAT 58.745 50.000 0.00 0.00 0.00 1.78
2181 2290 7.013823 TCCCATATTTCCATCTCAGATTCTC 57.986 40.000 0.00 0.00 0.00 2.87
2191 2300 6.326843 TCCATCTCAGATTCTCAGTGATGATT 59.673 38.462 13.51 0.00 36.58 2.57
2198 2307 6.363896 CAGATTCTCAGTGATGATTCATCTCG 59.636 42.308 23.49 16.47 41.06 4.04
2205 2314 3.867493 GTGATGATTCATCTCGCTTGACA 59.133 43.478 23.49 2.20 41.06 3.58
2346 2481 3.980989 TTGTGTACGACGGCCGCT 61.981 61.111 28.58 13.18 43.32 5.52
2355 2490 1.610522 ACGACGGCCGCTATAGTTTAT 59.389 47.619 28.58 0.00 43.32 1.40
2449 2584 3.649843 AGAATCCATGCATGTGGGAAAT 58.350 40.909 24.58 9.04 39.80 2.17
2450 2585 4.806892 AGAATCCATGCATGTGGGAAATA 58.193 39.130 24.58 0.00 39.80 1.40
2451 2586 5.399991 AGAATCCATGCATGTGGGAAATAT 58.600 37.500 24.58 4.35 39.80 1.28
2452 2587 6.554784 AGAATCCATGCATGTGGGAAATATA 58.445 36.000 24.58 0.00 39.80 0.86
2453 2588 7.186972 AGAATCCATGCATGTGGGAAATATAT 58.813 34.615 24.58 0.00 39.80 0.86
2454 2589 8.338493 AGAATCCATGCATGTGGGAAATATATA 58.662 33.333 24.58 0.00 39.80 0.86
2455 2590 9.139734 GAATCCATGCATGTGGGAAATATATAT 57.860 33.333 24.58 0.00 39.80 0.86
2457 2592 9.803507 ATCCATGCATGTGGGAAATATATATAG 57.196 33.333 24.58 3.85 39.80 1.31
2458 2593 8.219868 TCCATGCATGTGGGAAATATATATAGG 58.780 37.037 24.58 3.45 39.80 2.57
2459 2594 7.449395 CCATGCATGTGGGAAATATATATAGGG 59.551 40.741 24.58 0.00 35.55 3.53
2460 2595 7.763564 TGCATGTGGGAAATATATATAGGGA 57.236 36.000 0.00 0.00 0.00 4.20
2461 2596 8.348867 TGCATGTGGGAAATATATATAGGGAT 57.651 34.615 0.00 0.00 0.00 3.85
2462 2597 9.459094 TGCATGTGGGAAATATATATAGGGATA 57.541 33.333 0.00 0.00 0.00 2.59
2489 2624 2.403252 ATGTAGTCCCCGCAGAAAAG 57.597 50.000 0.00 0.00 0.00 2.27
2541 2676 1.471327 GGCTGCAGTGCAAGACAAAAA 60.471 47.619 20.22 0.00 38.41 1.94
2543 2678 2.473984 GCTGCAGTGCAAGACAAAAATC 59.526 45.455 20.22 0.00 38.41 2.17
2548 2683 2.618241 AGTGCAAGACAAAAATCGCTCA 59.382 40.909 0.00 0.00 0.00 4.26
2612 2747 3.702045 AGCGCTAACTTTGGATCTACTCT 59.298 43.478 8.99 0.00 0.00 3.24
2673 2812 1.528161 TGCTTAATCGATCTGCATGCG 59.472 47.619 14.09 8.20 0.00 4.73
2800 2939 6.347061 AAGGATTCTTCCATCCCACTAAAT 57.653 37.500 0.00 0.00 43.68 1.40
2810 2949 6.689561 TCCATCCCACTAAATCCTTCTACTA 58.310 40.000 0.00 0.00 0.00 1.82
2811 2950 6.553852 TCCATCCCACTAAATCCTTCTACTAC 59.446 42.308 0.00 0.00 0.00 2.73
2860 2999 0.108804 GCTGCATGCATGTTGCTCTT 60.109 50.000 26.79 0.00 45.31 2.85
2861 3000 1.629013 CTGCATGCATGTTGCTCTTG 58.371 50.000 26.79 0.79 45.31 3.02
2862 3001 0.389296 TGCATGCATGTTGCTCTTGC 60.389 50.000 26.79 12.11 45.31 4.01
2863 3002 0.108804 GCATGCATGTTGCTCTTGCT 60.109 50.000 26.79 0.00 45.31 3.91
3437 3583 1.609555 CTAGCCTTAGCCGAGGTGTAG 59.390 57.143 5.01 3.44 41.25 2.74
3507 3657 1.195222 CATTTTGCCTTGCTTTTCGGC 59.805 47.619 0.00 0.00 44.02 5.54
3526 3676 0.171231 CGACTTGATCGCTCTCACCA 59.829 55.000 0.00 0.00 45.52 4.17
3547 3697 2.026734 AGCCGATCGTGATCAGCG 59.973 61.111 15.09 3.36 43.91 5.18
3578 3729 8.767478 TTGCTAATTCTAGTGTTAGTTGTACC 57.233 34.615 14.15 3.04 31.98 3.34
3585 3736 1.528161 GTGTTAGTTGTACCCGCACAC 59.472 52.381 0.00 0.00 0.00 3.82
3590 3741 2.696566 TTGTACCCGCACACAACAG 58.303 52.632 0.00 0.00 29.93 3.16
3597 3748 2.076628 CGCACACAACAGCAATCGC 61.077 57.895 0.00 0.00 38.99 4.58
3610 3761 1.823828 CAATCGCAATTGCAGAGCTC 58.176 50.000 28.77 5.27 42.21 4.09
3626 3777 3.055819 AGAGCTCGAGCCTAATTTTGACA 60.056 43.478 32.94 0.00 43.38 3.58
3649 3800 2.623416 AGGAAGTTCCTTTTTGAAGCCG 59.377 45.455 19.27 0.00 46.91 5.52
3650 3801 2.361119 GGAAGTTCCTTTTTGAAGCCGT 59.639 45.455 15.09 0.00 32.53 5.68
3651 3802 3.181479 GGAAGTTCCTTTTTGAAGCCGTT 60.181 43.478 15.09 0.00 32.53 4.44
3652 3803 3.436700 AGTTCCTTTTTGAAGCCGTTG 57.563 42.857 0.00 0.00 0.00 4.10
3653 3804 2.758423 AGTTCCTTTTTGAAGCCGTTGT 59.242 40.909 0.00 0.00 0.00 3.32
3654 3805 3.194755 AGTTCCTTTTTGAAGCCGTTGTT 59.805 39.130 0.00 0.00 0.00 2.83
3655 3806 3.878160 TCCTTTTTGAAGCCGTTGTTT 57.122 38.095 0.00 0.00 0.00 2.83
3656 3807 3.776340 TCCTTTTTGAAGCCGTTGTTTC 58.224 40.909 0.00 0.00 32.80 2.78
3657 3808 3.445805 TCCTTTTTGAAGCCGTTGTTTCT 59.554 39.130 0.00 0.00 33.31 2.52
3658 3809 3.551485 CCTTTTTGAAGCCGTTGTTTCTG 59.449 43.478 0.00 0.00 33.31 3.02
3659 3810 4.420168 CTTTTTGAAGCCGTTGTTTCTGA 58.580 39.130 0.00 0.00 33.31 3.27
3660 3811 4.442375 TTTTGAAGCCGTTGTTTCTGAA 57.558 36.364 0.00 0.00 33.31 3.02
3661 3812 4.442375 TTTGAAGCCGTTGTTTCTGAAA 57.558 36.364 0.00 0.00 33.31 2.69
3662 3813 3.414549 TGAAGCCGTTGTTTCTGAAAC 57.585 42.857 22.94 22.94 41.73 2.78
3674 3825 6.922247 TGTTTCTGAAACATTACACGGTAA 57.078 33.333 27.14 4.93 45.79 2.85
3675 3826 6.950545 TGTTTCTGAAACATTACACGGTAAG 58.049 36.000 27.14 0.00 45.79 2.34
3676 3827 6.762187 TGTTTCTGAAACATTACACGGTAAGA 59.238 34.615 27.14 4.35 45.79 2.10
3677 3828 7.042321 TGTTTCTGAAACATTACACGGTAAGAG 60.042 37.037 27.14 0.00 45.79 2.85
3678 3829 6.092955 TCTGAAACATTACACGGTAAGAGT 57.907 37.500 0.00 0.00 0.00 3.24
3679 3830 7.218228 TCTGAAACATTACACGGTAAGAGTA 57.782 36.000 0.00 0.00 0.00 2.59
3680 3831 7.833786 TCTGAAACATTACACGGTAAGAGTAT 58.166 34.615 0.00 0.00 0.00 2.12
3681 3832 7.972277 TCTGAAACATTACACGGTAAGAGTATC 59.028 37.037 0.00 0.00 0.00 2.24
3694 3845 1.681538 GAGTATCTCAGGACGCCTCA 58.318 55.000 0.00 0.00 0.00 3.86
3695 3846 2.235016 GAGTATCTCAGGACGCCTCAT 58.765 52.381 0.00 0.00 0.00 2.90
3696 3847 3.413327 GAGTATCTCAGGACGCCTCATA 58.587 50.000 0.00 0.00 0.00 2.15
3697 3848 3.150767 AGTATCTCAGGACGCCTCATAC 58.849 50.000 0.00 4.10 0.00 2.39
3698 3849 0.955178 ATCTCAGGACGCCTCATACG 59.045 55.000 0.00 0.00 0.00 3.06
3699 3850 1.299468 CTCAGGACGCCTCATACGC 60.299 63.158 0.00 0.00 0.00 4.42
3700 3851 2.279517 CAGGACGCCTCATACGCC 60.280 66.667 0.00 0.00 0.00 5.68
3701 3852 2.442272 AGGACGCCTCATACGCCT 60.442 61.111 0.00 0.00 33.97 5.52
3702 3853 2.279517 GGACGCCTCATACGCCTG 60.280 66.667 0.00 0.00 0.00 4.85
3703 3854 2.962253 GACGCCTCATACGCCTGC 60.962 66.667 0.00 0.00 0.00 4.85
3704 3855 3.716539 GACGCCTCATACGCCTGCA 62.717 63.158 0.00 0.00 0.00 4.41
3705 3856 2.963854 CGCCTCATACGCCTGCAG 60.964 66.667 6.78 6.78 0.00 4.41
3706 3857 2.501128 GCCTCATACGCCTGCAGA 59.499 61.111 17.39 0.00 0.00 4.26
3707 3858 1.884926 GCCTCATACGCCTGCAGAC 60.885 63.158 17.39 1.25 0.00 3.51
3708 3859 1.589993 CCTCATACGCCTGCAGACG 60.590 63.158 21.42 21.42 0.00 4.18
3709 3860 2.202743 TCATACGCCTGCAGACGC 60.203 61.111 22.91 13.52 39.24 5.19
3717 3868 3.782244 CTGCAGACGCGCTTGGTC 61.782 66.667 8.42 5.74 42.97 4.02
3718 3869 4.600576 TGCAGACGCGCTTGGTCA 62.601 61.111 5.73 0.00 42.97 4.02
3719 3870 3.782244 GCAGACGCGCTTGGTCAG 61.782 66.667 5.73 8.88 36.87 3.51
3720 3871 2.356313 CAGACGCGCTTGGTCAGT 60.356 61.111 5.73 0.00 36.87 3.41
3721 3872 2.356313 AGACGCGCTTGGTCAGTG 60.356 61.111 5.73 0.00 36.87 3.66
3722 3873 2.355837 GACGCGCTTGGTCAGTGA 60.356 61.111 5.73 0.00 34.56 3.41
3723 3874 2.658707 GACGCGCTTGGTCAGTGAC 61.659 63.158 15.24 15.24 34.56 3.67
3736 3887 4.060038 GTCAGTGACCAAACAAGAGAGA 57.940 45.455 12.54 0.00 0.00 3.10
3737 3888 4.442706 GTCAGTGACCAAACAAGAGAGAA 58.557 43.478 12.54 0.00 0.00 2.87
3738 3889 5.059833 GTCAGTGACCAAACAAGAGAGAAT 58.940 41.667 12.54 0.00 0.00 2.40
3739 3890 6.223852 GTCAGTGACCAAACAAGAGAGAATA 58.776 40.000 12.54 0.00 0.00 1.75
3740 3891 6.367422 GTCAGTGACCAAACAAGAGAGAATAG 59.633 42.308 12.54 0.00 0.00 1.73
3741 3892 6.267699 TCAGTGACCAAACAAGAGAGAATAGA 59.732 38.462 0.00 0.00 0.00 1.98
3742 3893 6.931281 CAGTGACCAAACAAGAGAGAATAGAA 59.069 38.462 0.00 0.00 0.00 2.10
3743 3894 7.442364 CAGTGACCAAACAAGAGAGAATAGAAA 59.558 37.037 0.00 0.00 0.00 2.52
3744 3895 7.993183 AGTGACCAAACAAGAGAGAATAGAAAA 59.007 33.333 0.00 0.00 0.00 2.29
3745 3896 8.621286 GTGACCAAACAAGAGAGAATAGAAAAA 58.379 33.333 0.00 0.00 0.00 1.94
3762 3913 2.721425 AAAAAGGTGACCCAACTCGA 57.279 45.000 0.00 0.00 25.50 4.04
3763 3914 1.963172 AAAAGGTGACCCAACTCGAC 58.037 50.000 0.00 0.00 25.50 4.20
3764 3915 0.108019 AAAGGTGACCCAACTCGACC 59.892 55.000 0.00 0.00 25.50 4.79
3765 3916 1.765597 AAGGTGACCCAACTCGACCC 61.766 60.000 0.00 0.00 25.50 4.46
3766 3917 2.346365 GTGACCCAACTCGACCCC 59.654 66.667 0.00 0.00 0.00 4.95
3767 3918 2.203182 TGACCCAACTCGACCCCT 59.797 61.111 0.00 0.00 0.00 4.79
3768 3919 1.911766 TGACCCAACTCGACCCCTC 60.912 63.158 0.00 0.00 0.00 4.30
3769 3920 2.995574 ACCCAACTCGACCCCTCG 60.996 66.667 0.00 0.00 41.65 4.63
3770 3921 2.995574 CCCAACTCGACCCCTCGT 60.996 66.667 0.00 0.00 41.02 4.18
3771 3922 1.679977 CCCAACTCGACCCCTCGTA 60.680 63.158 0.00 0.00 41.02 3.43
3772 3923 1.041447 CCCAACTCGACCCCTCGTAT 61.041 60.000 0.00 0.00 41.02 3.06
3773 3924 0.384669 CCAACTCGACCCCTCGTATC 59.615 60.000 0.00 0.00 41.02 2.24
3774 3925 1.100510 CAACTCGACCCCTCGTATCA 58.899 55.000 0.00 0.00 41.02 2.15
3775 3926 1.681793 CAACTCGACCCCTCGTATCAT 59.318 52.381 0.00 0.00 41.02 2.45
3776 3927 1.606903 ACTCGACCCCTCGTATCATC 58.393 55.000 0.00 0.00 41.02 2.92
3777 3928 1.143277 ACTCGACCCCTCGTATCATCT 59.857 52.381 0.00 0.00 41.02 2.90
3778 3929 2.231529 CTCGACCCCTCGTATCATCTT 58.768 52.381 0.00 0.00 41.02 2.40
3779 3930 2.623889 CTCGACCCCTCGTATCATCTTT 59.376 50.000 0.00 0.00 41.02 2.52
3780 3931 3.819337 CTCGACCCCTCGTATCATCTTTA 59.181 47.826 0.00 0.00 41.02 1.85
3781 3932 4.404640 TCGACCCCTCGTATCATCTTTAT 58.595 43.478 0.00 0.00 41.02 1.40
3782 3933 5.563592 TCGACCCCTCGTATCATCTTTATA 58.436 41.667 0.00 0.00 41.02 0.98
3783 3934 6.185511 TCGACCCCTCGTATCATCTTTATAT 58.814 40.000 0.00 0.00 41.02 0.86
3784 3935 6.095021 TCGACCCCTCGTATCATCTTTATATG 59.905 42.308 0.00 0.00 41.02 1.78
3785 3936 6.127703 CGACCCCTCGTATCATCTTTATATGT 60.128 42.308 0.00 0.00 35.00 2.29
3786 3937 7.171630 ACCCCTCGTATCATCTTTATATGTC 57.828 40.000 0.00 0.00 0.00 3.06
3787 3938 6.154706 ACCCCTCGTATCATCTTTATATGTCC 59.845 42.308 0.00 0.00 0.00 4.02
3788 3939 6.266323 CCCTCGTATCATCTTTATATGTCCG 58.734 44.000 0.00 0.00 0.00 4.79
3789 3940 6.266323 CCTCGTATCATCTTTATATGTCCGG 58.734 44.000 0.00 0.00 0.00 5.14
3790 3941 6.203808 TCGTATCATCTTTATATGTCCGGG 57.796 41.667 0.00 0.00 0.00 5.73
3791 3942 4.804139 CGTATCATCTTTATATGTCCGGGC 59.196 45.833 0.00 0.00 0.00 6.13
3792 3943 5.394224 CGTATCATCTTTATATGTCCGGGCT 60.394 44.000 7.97 0.00 0.00 5.19
3793 3944 4.271696 TCATCTTTATATGTCCGGGCTG 57.728 45.455 7.97 0.00 0.00 4.85
3794 3945 3.646162 TCATCTTTATATGTCCGGGCTGT 59.354 43.478 7.97 0.00 0.00 4.40
3795 3946 4.102524 TCATCTTTATATGTCCGGGCTGTT 59.897 41.667 7.97 0.00 0.00 3.16
3796 3947 4.497291 TCTTTATATGTCCGGGCTGTTT 57.503 40.909 7.97 0.00 0.00 2.83
3797 3948 4.196193 TCTTTATATGTCCGGGCTGTTTG 58.804 43.478 7.97 0.00 0.00 2.93
3798 3949 1.961793 TATATGTCCGGGCTGTTTGC 58.038 50.000 7.97 0.00 41.94 3.68
3799 3950 1.095228 ATATGTCCGGGCTGTTTGCG 61.095 55.000 7.97 0.00 44.05 4.85
3800 3951 2.173758 TATGTCCGGGCTGTTTGCGA 62.174 55.000 7.97 0.00 44.05 5.10
3801 3952 2.975799 GTCCGGGCTGTTTGCGAA 60.976 61.111 0.00 0.00 44.05 4.70
3802 3953 2.975799 TCCGGGCTGTTTGCGAAC 60.976 61.111 10.09 10.09 44.05 3.95
3803 3954 4.038080 CCGGGCTGTTTGCGAACC 62.038 66.667 14.35 0.00 44.05 3.62
3804 3955 4.038080 CGGGCTGTTTGCGAACCC 62.038 66.667 14.35 8.78 44.05 4.11
3805 3956 2.597510 GGGCTGTTTGCGAACCCT 60.598 61.111 14.35 0.00 44.05 4.34
3806 3957 2.626780 GGGCTGTTTGCGAACCCTC 61.627 63.158 14.35 1.70 44.05 4.30
3807 3958 1.896660 GGCTGTTTGCGAACCCTCA 60.897 57.895 14.35 0.00 44.05 3.86
3808 3959 1.244019 GGCTGTTTGCGAACCCTCAT 61.244 55.000 14.35 0.00 44.05 2.90
3809 3960 1.448985 GCTGTTTGCGAACCCTCATA 58.551 50.000 14.35 0.00 34.80 2.15
3810 3961 2.017049 GCTGTTTGCGAACCCTCATAT 58.983 47.619 14.35 0.00 34.80 1.78
3811 3962 2.032178 GCTGTTTGCGAACCCTCATATC 59.968 50.000 14.35 0.00 34.80 1.63
3812 3963 2.614057 CTGTTTGCGAACCCTCATATCC 59.386 50.000 14.35 0.00 34.80 2.59
3813 3964 2.026729 TGTTTGCGAACCCTCATATCCA 60.027 45.455 14.35 0.00 34.80 3.41
3814 3965 3.214328 GTTTGCGAACCCTCATATCCAT 58.786 45.455 5.42 0.00 0.00 3.41
3815 3966 2.839486 TGCGAACCCTCATATCCATC 57.161 50.000 0.00 0.00 0.00 3.51
3816 3967 2.329267 TGCGAACCCTCATATCCATCT 58.671 47.619 0.00 0.00 0.00 2.90
3817 3968 2.300152 TGCGAACCCTCATATCCATCTC 59.700 50.000 0.00 0.00 0.00 2.75
3818 3969 2.300152 GCGAACCCTCATATCCATCTCA 59.700 50.000 0.00 0.00 0.00 3.27
3819 3970 3.244215 GCGAACCCTCATATCCATCTCAA 60.244 47.826 0.00 0.00 0.00 3.02
3820 3971 4.743651 GCGAACCCTCATATCCATCTCAAA 60.744 45.833 0.00 0.00 0.00 2.69
3821 3972 5.555017 CGAACCCTCATATCCATCTCAAAT 58.445 41.667 0.00 0.00 0.00 2.32
3822 3973 5.410746 CGAACCCTCATATCCATCTCAAATG 59.589 44.000 0.00 0.00 0.00 2.32
3823 3974 6.520021 AACCCTCATATCCATCTCAAATGA 57.480 37.500 0.00 0.00 0.00 2.57
3824 3975 6.520021 ACCCTCATATCCATCTCAAATGAA 57.480 37.500 0.00 0.00 0.00 2.57
3825 3976 7.100068 ACCCTCATATCCATCTCAAATGAAT 57.900 36.000 0.00 0.00 0.00 2.57
3826 3977 6.946583 ACCCTCATATCCATCTCAAATGAATG 59.053 38.462 0.00 0.00 0.00 2.67
3827 3978 6.946583 CCCTCATATCCATCTCAAATGAATGT 59.053 38.462 0.00 0.00 0.00 2.71
3828 3979 8.105197 CCCTCATATCCATCTCAAATGAATGTA 58.895 37.037 0.00 0.00 0.00 2.29
3829 3980 9.163899 CCTCATATCCATCTCAAATGAATGTAG 57.836 37.037 0.00 0.00 0.00 2.74
3830 3981 9.163899 CTCATATCCATCTCAAATGAATGTAGG 57.836 37.037 0.00 0.00 0.00 3.18
3831 3982 8.105197 TCATATCCATCTCAAATGAATGTAGGG 58.895 37.037 0.00 0.00 0.00 3.53
3832 3983 5.974156 TCCATCTCAAATGAATGTAGGGA 57.026 39.130 0.00 0.00 0.00 4.20
3833 3984 5.933617 TCCATCTCAAATGAATGTAGGGAG 58.066 41.667 0.00 0.00 0.00 4.30
3834 3985 5.068636 CCATCTCAAATGAATGTAGGGAGG 58.931 45.833 0.00 0.00 0.00 4.30
3835 3986 5.163163 CCATCTCAAATGAATGTAGGGAGGA 60.163 44.000 0.00 0.00 0.00 3.71
3836 3987 6.466904 CCATCTCAAATGAATGTAGGGAGGAT 60.467 42.308 0.00 0.00 0.00 3.24
3837 3988 7.256799 CCATCTCAAATGAATGTAGGGAGGATA 60.257 40.741 0.00 0.00 0.00 2.59
3838 3989 7.878621 TCTCAAATGAATGTAGGGAGGATAT 57.121 36.000 0.00 0.00 0.00 1.63
3839 3990 7.683578 TCTCAAATGAATGTAGGGAGGATATG 58.316 38.462 0.00 0.00 0.00 1.78
3840 3991 7.513781 TCTCAAATGAATGTAGGGAGGATATGA 59.486 37.037 0.00 0.00 0.00 2.15
3841 3992 7.683578 TCAAATGAATGTAGGGAGGATATGAG 58.316 38.462 0.00 0.00 0.00 2.90
3842 3993 6.633325 AATGAATGTAGGGAGGATATGAGG 57.367 41.667 0.00 0.00 0.00 3.86
3843 3994 4.429505 TGAATGTAGGGAGGATATGAGGG 58.570 47.826 0.00 0.00 0.00 4.30
3844 3995 2.327325 TGTAGGGAGGATATGAGGGC 57.673 55.000 0.00 0.00 0.00 5.19
3845 3996 1.795786 TGTAGGGAGGATATGAGGGCT 59.204 52.381 0.00 0.00 0.00 5.19
3846 3997 2.225394 TGTAGGGAGGATATGAGGGCTC 60.225 54.545 0.00 0.00 0.00 4.70
3847 3998 1.175262 AGGGAGGATATGAGGGCTCT 58.825 55.000 0.00 0.00 0.00 4.09
3848 3999 1.511747 AGGGAGGATATGAGGGCTCTT 59.488 52.381 0.00 0.00 0.00 2.85
3849 4000 2.089696 AGGGAGGATATGAGGGCTCTTT 60.090 50.000 0.00 0.00 0.00 2.52
3850 4001 2.304470 GGGAGGATATGAGGGCTCTTTC 59.696 54.545 0.00 0.00 0.00 2.62
3851 4002 3.247162 GGAGGATATGAGGGCTCTTTCT 58.753 50.000 0.00 0.00 0.00 2.52
3852 4003 3.260632 GGAGGATATGAGGGCTCTTTCTC 59.739 52.174 0.00 0.00 0.00 2.87
3853 4004 4.159557 GAGGATATGAGGGCTCTTTCTCT 58.840 47.826 0.00 0.00 0.00 3.10
3854 4005 4.565817 AGGATATGAGGGCTCTTTCTCTT 58.434 43.478 0.00 0.00 0.00 2.85
3855 4006 4.974501 AGGATATGAGGGCTCTTTCTCTTT 59.025 41.667 0.00 0.00 0.00 2.52
3856 4007 5.071653 AGGATATGAGGGCTCTTTCTCTTTC 59.928 44.000 0.00 0.00 0.00 2.62
3857 4008 5.071653 GGATATGAGGGCTCTTTCTCTTTCT 59.928 44.000 0.00 0.00 0.00 2.52
3858 4009 4.925390 ATGAGGGCTCTTTCTCTTTCTT 57.075 40.909 0.00 0.00 0.00 2.52
3859 4010 4.713792 TGAGGGCTCTTTCTCTTTCTTT 57.286 40.909 0.00 0.00 0.00 2.52
3860 4011 5.825593 TGAGGGCTCTTTCTCTTTCTTTA 57.174 39.130 0.00 0.00 0.00 1.85
3861 4012 6.380079 TGAGGGCTCTTTCTCTTTCTTTAT 57.620 37.500 0.00 0.00 0.00 1.40
3862 4013 6.784031 TGAGGGCTCTTTCTCTTTCTTTATT 58.216 36.000 0.00 0.00 0.00 1.40
3863 4014 6.881602 TGAGGGCTCTTTCTCTTTCTTTATTC 59.118 38.462 0.00 0.00 0.00 1.75
3864 4015 6.784031 AGGGCTCTTTCTCTTTCTTTATTCA 58.216 36.000 0.00 0.00 0.00 2.57
3865 4016 7.409358 AGGGCTCTTTCTCTTTCTTTATTCAT 58.591 34.615 0.00 0.00 0.00 2.57
3866 4017 7.892771 AGGGCTCTTTCTCTTTCTTTATTCATT 59.107 33.333 0.00 0.00 0.00 2.57
3867 4018 8.187480 GGGCTCTTTCTCTTTCTTTATTCATTC 58.813 37.037 0.00 0.00 0.00 2.67
3868 4019 8.955388 GGCTCTTTCTCTTTCTTTATTCATTCT 58.045 33.333 0.00 0.00 0.00 2.40
3894 4045 6.884280 TTTTTCTTTCTCTTCATCTCCACC 57.116 37.500 0.00 0.00 0.00 4.61
3895 4046 5.567037 TTTCTTTCTCTTCATCTCCACCA 57.433 39.130 0.00 0.00 0.00 4.17
3896 4047 5.567037 TTCTTTCTCTTCATCTCCACCAA 57.433 39.130 0.00 0.00 0.00 3.67
3897 4048 5.768980 TCTTTCTCTTCATCTCCACCAAT 57.231 39.130 0.00 0.00 0.00 3.16
3898 4049 5.738909 TCTTTCTCTTCATCTCCACCAATC 58.261 41.667 0.00 0.00 0.00 2.67
3899 4050 5.249163 TCTTTCTCTTCATCTCCACCAATCA 59.751 40.000 0.00 0.00 0.00 2.57
3900 4051 4.478206 TCTCTTCATCTCCACCAATCAC 57.522 45.455 0.00 0.00 0.00 3.06
3901 4052 3.118992 TCTCTTCATCTCCACCAATCACG 60.119 47.826 0.00 0.00 0.00 4.35
3902 4053 2.567169 TCTTCATCTCCACCAATCACGT 59.433 45.455 0.00 0.00 0.00 4.49
3903 4054 2.385013 TCATCTCCACCAATCACGTG 57.615 50.000 9.94 9.94 0.00 4.49
3904 4055 0.729116 CATCTCCACCAATCACGTGC 59.271 55.000 11.67 0.00 0.00 5.34
3905 4056 0.324614 ATCTCCACCAATCACGTGCA 59.675 50.000 11.67 0.00 0.00 4.57
3906 4057 0.107643 TCTCCACCAATCACGTGCAA 59.892 50.000 11.67 0.00 0.00 4.08
3907 4058 0.518636 CTCCACCAATCACGTGCAAG 59.481 55.000 11.67 0.00 0.00 4.01
3908 4059 0.179032 TCCACCAATCACGTGCAAGT 60.179 50.000 11.67 0.00 0.00 3.16
3909 4060 0.040157 CCACCAATCACGTGCAAGTG 60.040 55.000 24.56 24.56 43.11 3.16
3914 4065 2.279851 TCACGTGCAAGTGACCGG 60.280 61.111 28.20 0.00 45.18 5.28
3915 4066 2.279851 CACGTGCAAGTGACCGGA 60.280 61.111 26.06 0.00 44.43 5.14
3916 4067 1.667830 CACGTGCAAGTGACCGGAT 60.668 57.895 26.06 0.00 44.43 4.18
3917 4068 0.389296 CACGTGCAAGTGACCGGATA 60.389 55.000 26.06 0.00 44.43 2.59
3918 4069 0.535335 ACGTGCAAGTGACCGGATAT 59.465 50.000 9.46 0.00 0.00 1.63
3919 4070 1.752498 ACGTGCAAGTGACCGGATATA 59.248 47.619 9.46 0.00 0.00 0.86
3920 4071 2.364324 ACGTGCAAGTGACCGGATATAT 59.636 45.455 9.46 0.00 0.00 0.86
3921 4072 2.731451 CGTGCAAGTGACCGGATATATG 59.269 50.000 9.46 2.34 0.00 1.78
3922 4073 3.552068 CGTGCAAGTGACCGGATATATGA 60.552 47.826 9.46 0.00 0.00 2.15
3923 4074 3.990469 GTGCAAGTGACCGGATATATGAG 59.010 47.826 9.46 0.00 0.00 2.90
3924 4075 3.006859 TGCAAGTGACCGGATATATGAGG 59.993 47.826 9.46 0.00 0.00 3.86
3925 4076 3.258372 GCAAGTGACCGGATATATGAGGA 59.742 47.826 9.46 0.00 0.00 3.71
3926 4077 4.262463 GCAAGTGACCGGATATATGAGGAA 60.262 45.833 9.46 0.00 0.00 3.36
3927 4078 5.473931 CAAGTGACCGGATATATGAGGAAG 58.526 45.833 9.46 0.00 0.00 3.46
3928 4079 4.999310 AGTGACCGGATATATGAGGAAGA 58.001 43.478 9.46 0.00 0.00 2.87
3929 4080 5.394738 AGTGACCGGATATATGAGGAAGAA 58.605 41.667 9.46 0.00 0.00 2.52
3930 4081 5.839063 AGTGACCGGATATATGAGGAAGAAA 59.161 40.000 9.46 0.00 0.00 2.52
3931 4082 6.326583 AGTGACCGGATATATGAGGAAGAAAA 59.673 38.462 9.46 0.00 0.00 2.29
3932 4083 7.016661 AGTGACCGGATATATGAGGAAGAAAAT 59.983 37.037 9.46 0.00 0.00 1.82
3933 4084 7.118390 GTGACCGGATATATGAGGAAGAAAATG 59.882 40.741 9.46 0.00 0.00 2.32
3934 4085 7.016170 TGACCGGATATATGAGGAAGAAAATGA 59.984 37.037 9.46 0.00 0.00 2.57
3935 4086 7.390027 ACCGGATATATGAGGAAGAAAATGAG 58.610 38.462 9.46 0.00 0.00 2.90
3936 4087 6.820656 CCGGATATATGAGGAAGAAAATGAGG 59.179 42.308 0.00 0.00 0.00 3.86
3937 4088 7.310671 CCGGATATATGAGGAAGAAAATGAGGA 60.311 40.741 0.00 0.00 0.00 3.71
3938 4089 8.263640 CGGATATATGAGGAAGAAAATGAGGAT 58.736 37.037 0.00 0.00 0.00 3.24
3939 4090 9.972106 GGATATATGAGGAAGAAAATGAGGATT 57.028 33.333 0.00 0.00 0.00 3.01
3942 4093 6.770746 ATGAGGAAGAAAATGAGGATTGTG 57.229 37.500 0.00 0.00 0.00 3.33
3943 4094 5.012239 TGAGGAAGAAAATGAGGATTGTGG 58.988 41.667 0.00 0.00 0.00 4.17
3944 4095 3.766051 AGGAAGAAAATGAGGATTGTGGC 59.234 43.478 0.00 0.00 0.00 5.01
3945 4096 3.766051 GGAAGAAAATGAGGATTGTGGCT 59.234 43.478 0.00 0.00 0.00 4.75
3946 4097 4.381292 GGAAGAAAATGAGGATTGTGGCTG 60.381 45.833 0.00 0.00 0.00 4.85
3947 4098 2.494870 AGAAAATGAGGATTGTGGCTGC 59.505 45.455 0.00 0.00 0.00 5.25
3948 4099 0.813184 AAATGAGGATTGTGGCTGCG 59.187 50.000 0.00 0.00 0.00 5.18
3949 4100 1.660560 AATGAGGATTGTGGCTGCGC 61.661 55.000 0.00 0.00 0.00 6.09
3950 4101 2.747460 GAGGATTGTGGCTGCGCA 60.747 61.111 10.98 10.98 0.00 6.09
3951 4102 2.282391 AGGATTGTGGCTGCGCAA 60.282 55.556 13.05 9.93 0.00 4.85
3952 4103 1.865788 GAGGATTGTGGCTGCGCAAA 61.866 55.000 13.05 1.92 0.00 3.68
3953 4104 1.216178 GGATTGTGGCTGCGCAAAT 59.784 52.632 13.05 7.90 0.00 2.32
3954 4105 1.079875 GGATTGTGGCTGCGCAAATG 61.080 55.000 13.05 0.00 0.00 2.32
3955 4106 1.079681 ATTGTGGCTGCGCAAATGG 60.080 52.632 13.05 0.00 0.00 3.16
3956 4107 1.534336 ATTGTGGCTGCGCAAATGGA 61.534 50.000 13.05 0.00 0.00 3.41
3957 4108 1.534336 TTGTGGCTGCGCAAATGGAT 61.534 50.000 13.05 0.00 0.00 3.41
3958 4109 0.679321 TGTGGCTGCGCAAATGGATA 60.679 50.000 13.05 0.00 0.00 2.59
3959 4110 0.455410 GTGGCTGCGCAAATGGATAA 59.545 50.000 13.05 0.00 0.00 1.75
3960 4111 0.740149 TGGCTGCGCAAATGGATAAG 59.260 50.000 13.05 0.00 0.00 1.73
3961 4112 0.740737 GGCTGCGCAAATGGATAAGT 59.259 50.000 13.05 0.00 0.00 2.24
3962 4113 1.946768 GGCTGCGCAAATGGATAAGTA 59.053 47.619 13.05 0.00 0.00 2.24
3963 4114 2.031682 GGCTGCGCAAATGGATAAGTAG 60.032 50.000 13.05 0.00 0.00 2.57
3964 4115 2.031682 GCTGCGCAAATGGATAAGTAGG 60.032 50.000 13.05 0.00 0.00 3.18
3965 4116 2.549754 CTGCGCAAATGGATAAGTAGGG 59.450 50.000 13.05 0.00 0.00 3.53
3966 4117 2.171659 TGCGCAAATGGATAAGTAGGGA 59.828 45.455 8.16 0.00 0.00 4.20
3967 4118 2.548480 GCGCAAATGGATAAGTAGGGAC 59.452 50.000 0.30 0.00 0.00 4.46
3968 4119 3.744530 GCGCAAATGGATAAGTAGGGACT 60.745 47.826 0.30 0.00 46.37 3.85
3969 4120 4.058817 CGCAAATGGATAAGTAGGGACTC 58.941 47.826 0.00 0.00 41.75 3.36
3970 4121 4.442893 CGCAAATGGATAAGTAGGGACTCA 60.443 45.833 0.00 0.00 41.75 3.41
3971 4122 5.437060 GCAAATGGATAAGTAGGGACTCAA 58.563 41.667 0.00 0.00 41.75 3.02
3972 4123 5.885912 GCAAATGGATAAGTAGGGACTCAAA 59.114 40.000 0.00 0.00 41.75 2.69
3973 4124 6.377146 GCAAATGGATAAGTAGGGACTCAAAA 59.623 38.462 0.00 0.00 41.75 2.44
3974 4125 7.628580 GCAAATGGATAAGTAGGGACTCAAAAC 60.629 40.741 0.00 0.00 41.75 2.43
3975 4126 6.636454 ATGGATAAGTAGGGACTCAAAACA 57.364 37.500 0.00 0.00 41.75 2.83
3976 4127 6.049955 TGGATAAGTAGGGACTCAAAACAG 57.950 41.667 0.00 0.00 41.75 3.16
3977 4128 5.783360 TGGATAAGTAGGGACTCAAAACAGA 59.217 40.000 0.00 0.00 41.75 3.41
3978 4129 6.107343 GGATAAGTAGGGACTCAAAACAGAC 58.893 44.000 0.00 0.00 41.75 3.51
3979 4130 6.295688 GGATAAGTAGGGACTCAAAACAGACA 60.296 42.308 0.00 0.00 41.75 3.41
3980 4131 4.338379 AGTAGGGACTCAAAACAGACAC 57.662 45.455 0.00 0.00 41.75 3.67
3981 4132 3.709653 AGTAGGGACTCAAAACAGACACA 59.290 43.478 0.00 0.00 41.75 3.72
3982 4133 2.919228 AGGGACTCAAAACAGACACAC 58.081 47.619 0.00 0.00 0.00 3.82
3983 4134 1.947456 GGGACTCAAAACAGACACACC 59.053 52.381 0.00 0.00 0.00 4.16
3984 4135 1.947456 GGACTCAAAACAGACACACCC 59.053 52.381 0.00 0.00 0.00 4.61
3985 4136 1.597663 GACTCAAAACAGACACACCCG 59.402 52.381 0.00 0.00 0.00 5.28
3986 4137 0.944386 CTCAAAACAGACACACCCGG 59.056 55.000 0.00 0.00 0.00 5.73
3987 4138 0.253610 TCAAAACAGACACACCCGGT 59.746 50.000 0.00 0.00 0.00 5.28
3988 4139 0.661020 CAAAACAGACACACCCGGTC 59.339 55.000 0.00 0.00 35.50 4.79
3989 4140 0.253610 AAAACAGACACACCCGGTCA 59.746 50.000 0.00 0.00 37.74 4.02
3990 4141 0.463116 AAACAGACACACCCGGTCAC 60.463 55.000 0.00 0.00 37.74 3.67
3991 4142 1.335132 AACAGACACACCCGGTCACT 61.335 55.000 0.00 0.00 37.74 3.41
3992 4143 0.468585 ACAGACACACCCGGTCACTA 60.469 55.000 0.00 0.00 37.74 2.74
3993 4144 0.677288 CAGACACACCCGGTCACTAA 59.323 55.000 0.00 0.00 37.74 2.24
3994 4145 0.677842 AGACACACCCGGTCACTAAC 59.322 55.000 0.00 0.00 37.74 2.34
3995 4146 0.320160 GACACACCCGGTCACTAACC 60.320 60.000 0.00 0.00 45.45 2.85
4006 4157 3.062323 GTCACTAACCAGATACGTCCG 57.938 52.381 0.00 0.00 0.00 4.79
4007 4158 1.402968 TCACTAACCAGATACGTCCGC 59.597 52.381 0.00 0.00 0.00 5.54
4008 4159 1.133598 CACTAACCAGATACGTCCGCA 59.866 52.381 0.00 0.00 0.00 5.69
4009 4160 1.404391 ACTAACCAGATACGTCCGCAG 59.596 52.381 0.00 0.00 0.00 5.18
4010 4161 1.674441 CTAACCAGATACGTCCGCAGA 59.326 52.381 0.00 0.00 0.00 4.26
4011 4162 0.172803 AACCAGATACGTCCGCAGAC 59.827 55.000 0.00 0.00 39.83 3.51
4020 4171 1.787847 GTCCGCAGACGTTTGATGG 59.212 57.895 10.75 10.56 37.70 3.51
4021 4172 1.375396 TCCGCAGACGTTTGATGGG 60.375 57.895 10.75 7.52 37.70 4.00
4022 4173 1.671054 CCGCAGACGTTTGATGGGT 60.671 57.895 10.75 0.00 37.70 4.51
4023 4174 1.635663 CCGCAGACGTTTGATGGGTC 61.636 60.000 10.75 0.00 37.70 4.46
4024 4175 1.787847 GCAGACGTTTGATGGGTCG 59.212 57.895 10.75 0.00 35.87 4.79
4025 4176 0.669318 GCAGACGTTTGATGGGTCGA 60.669 55.000 10.75 0.00 35.87 4.20
4026 4177 1.790755 CAGACGTTTGATGGGTCGAA 58.209 50.000 0.00 0.00 35.87 3.71
4027 4178 2.346803 CAGACGTTTGATGGGTCGAAT 58.653 47.619 0.00 0.00 35.87 3.34
4028 4179 2.742053 CAGACGTTTGATGGGTCGAATT 59.258 45.455 0.00 0.00 35.87 2.17
4029 4180 3.930229 CAGACGTTTGATGGGTCGAATTA 59.070 43.478 0.00 0.00 35.87 1.40
4030 4181 4.032900 CAGACGTTTGATGGGTCGAATTAG 59.967 45.833 0.00 0.00 35.87 1.73
4031 4182 4.081862 AGACGTTTGATGGGTCGAATTAGA 60.082 41.667 0.00 0.00 35.87 2.10
4032 4183 4.181578 ACGTTTGATGGGTCGAATTAGAG 58.818 43.478 0.00 0.00 30.63 2.43
4033 4184 3.555956 CGTTTGATGGGTCGAATTAGAGG 59.444 47.826 0.00 0.00 30.63 3.69
4034 4185 4.514401 GTTTGATGGGTCGAATTAGAGGT 58.486 43.478 0.00 0.00 30.63 3.85
4035 4186 5.667466 GTTTGATGGGTCGAATTAGAGGTA 58.333 41.667 0.00 0.00 30.63 3.08
4036 4187 4.931661 TGATGGGTCGAATTAGAGGTAC 57.068 45.455 0.00 0.00 0.00 3.34
4037 4188 3.317149 TGATGGGTCGAATTAGAGGTACG 59.683 47.826 0.00 0.00 0.00 3.67
4038 4189 2.726821 TGGGTCGAATTAGAGGTACGT 58.273 47.619 0.00 0.00 0.00 3.57
4039 4190 3.884895 TGGGTCGAATTAGAGGTACGTA 58.115 45.455 0.00 0.00 0.00 3.57
4040 4191 4.464008 TGGGTCGAATTAGAGGTACGTAT 58.536 43.478 0.00 0.00 0.00 3.06
4041 4192 4.516698 TGGGTCGAATTAGAGGTACGTATC 59.483 45.833 0.00 0.00 0.00 2.24
4042 4193 4.759183 GGGTCGAATTAGAGGTACGTATCT 59.241 45.833 8.42 8.42 0.00 1.98
4043 4194 5.334724 GGGTCGAATTAGAGGTACGTATCTG 60.335 48.000 14.37 0.00 0.00 2.90
4044 4195 5.238214 GGTCGAATTAGAGGTACGTATCTGT 59.762 44.000 14.37 12.34 0.00 3.41
4045 4196 6.425114 GGTCGAATTAGAGGTACGTATCTGTA 59.575 42.308 14.37 11.16 0.00 2.74
4046 4197 7.359933 GGTCGAATTAGAGGTACGTATCTGTAG 60.360 44.444 14.37 1.99 0.00 2.74
4047 4198 7.383572 GTCGAATTAGAGGTACGTATCTGTAGA 59.616 40.741 14.37 4.44 0.00 2.59
4048 4199 8.093307 TCGAATTAGAGGTACGTATCTGTAGAT 58.907 37.037 14.37 6.24 38.51 1.98
4049 4200 8.169910 CGAATTAGAGGTACGTATCTGTAGATG 58.830 40.741 14.37 1.69 36.05 2.90
4050 4201 6.798315 TTAGAGGTACGTATCTGTAGATGC 57.202 41.667 14.37 0.00 36.05 3.91
4051 4202 4.975631 AGAGGTACGTATCTGTAGATGCT 58.024 43.478 14.37 0.00 35.41 3.79
4052 4203 4.998672 AGAGGTACGTATCTGTAGATGCTC 59.001 45.833 14.37 0.00 35.41 4.26
4053 4204 4.975631 AGGTACGTATCTGTAGATGCTCT 58.024 43.478 7.76 0.00 35.41 4.09
4054 4205 6.014413 AGAGGTACGTATCTGTAGATGCTCTA 60.014 42.308 14.37 0.00 35.41 2.43
4055 4206 6.531923 AGGTACGTATCTGTAGATGCTCTAA 58.468 40.000 7.76 0.00 35.41 2.10
4056 4207 6.651643 AGGTACGTATCTGTAGATGCTCTAAG 59.348 42.308 7.76 0.00 35.41 2.18
4057 4208 5.365403 ACGTATCTGTAGATGCTCTAAGC 57.635 43.478 4.67 0.00 42.82 3.09
4058 4209 5.067273 ACGTATCTGTAGATGCTCTAAGCT 58.933 41.667 4.67 0.00 42.97 3.74
4059 4210 5.533154 ACGTATCTGTAGATGCTCTAAGCTT 59.467 40.000 3.48 3.48 42.97 3.74
4060 4211 5.855925 CGTATCTGTAGATGCTCTAAGCTTG 59.144 44.000 9.86 0.00 42.97 4.01
4063 4214 2.158900 TGTAGATGCTCTAAGCTTGGGC 60.159 50.000 9.86 12.31 42.97 5.36
4070 4221 4.280819 TGCTCTAAGCTTGGGCATAAAAT 58.719 39.130 17.64 0.00 42.97 1.82
4078 4229 4.718276 AGCTTGGGCATAAAATCCAAAGAT 59.282 37.500 0.00 0.00 39.69 2.40
4083 4234 6.642430 TGGGCATAAAATCCAAAGATCAAAG 58.358 36.000 0.00 0.00 0.00 2.77
4087 4238 7.322664 GCATAAAATCCAAAGATCAAAGTCCA 58.677 34.615 0.00 0.00 0.00 4.02
4102 4253 5.414454 TCAAAGTCCAAATCCATAAAGACCG 59.586 40.000 0.00 0.00 0.00 4.79
4114 4265 7.385778 TCCATAAAGACCGAACTAAAATTGG 57.614 36.000 0.00 0.00 0.00 3.16
4136 4288 6.074648 TGGTTATCAAACTGGAAGACCAAAT 58.925 36.000 0.00 0.00 46.32 2.32
4139 4291 8.749354 GGTTATCAAACTGGAAGACCAAATTAT 58.251 33.333 0.00 0.00 46.32 1.28
4170 4324 5.454045 GGATTAGTCTTCTTCCCTGGATGAC 60.454 48.000 0.00 0.00 37.81 3.06
4185 4339 4.146564 TGGATGACCGAATAACCGAGATA 58.853 43.478 0.00 0.00 39.42 1.98
4187 4341 4.458295 GGATGACCGAATAACCGAGATAGA 59.542 45.833 0.00 0.00 0.00 1.98
4191 4345 3.119919 ACCGAATAACCGAGATAGATCGC 60.120 47.826 0.00 0.00 41.37 4.58
4198 4352 3.072211 ACCGAGATAGATCGCATTCGTA 58.928 45.455 10.32 0.00 41.37 3.43
4208 4362 8.812147 ATAGATCGCATTCGTACAATTCTTTA 57.188 30.769 0.00 0.00 36.96 1.85
4212 4366 8.812147 ATCGCATTCGTACAATTCTTTATCTA 57.188 30.769 0.00 0.00 36.96 1.98
4281 4440 6.778834 TGGCACAATTCTGATTGAATACAT 57.221 33.333 6.17 0.00 43.99 2.29
4307 4466 8.260114 TGATATACACATGTTGTCTGAACATCT 58.740 33.333 0.00 0.00 38.69 2.90
4329 4488 3.317711 TGACTTTTGGTTGCATACACCTG 59.682 43.478 7.54 0.00 0.00 4.00
4334 4493 2.785562 TGGTTGCATACACCTGTTACC 58.214 47.619 7.54 0.00 0.00 2.85
4349 4508 5.118990 CCTGTTACCCATATCTGTTGTCTG 58.881 45.833 0.00 0.00 0.00 3.51
4355 4514 5.440610 ACCCATATCTGTTGTCTGAATTCC 58.559 41.667 2.27 0.00 0.00 3.01
4360 4519 4.265904 TCTGTTGTCTGAATTCCGCTTA 57.734 40.909 2.27 0.00 0.00 3.09
4375 4534 3.634910 TCCGCTTACATGCATCACTACTA 59.365 43.478 0.00 0.00 0.00 1.82
4405 4564 5.188434 ACATGAATCTGAGTTGTACCATGG 58.812 41.667 11.19 11.19 35.70 3.66
4417 4576 2.306219 TGTACCATGGAATTTGGTCGGA 59.694 45.455 21.47 0.00 44.15 4.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.202932 CCACTCGAGCATTCCCCG 60.203 66.667 13.61 0.00 0.00 5.73
6 7 1.938657 CTCGTCCACCACTCGAGCAT 61.939 60.000 13.61 0.00 42.94 3.79
41 42 1.079819 AGGCCAACTCACGTCATCG 60.080 57.895 5.01 0.00 43.34 3.84
73 74 2.930562 GGATCCCGGGCAGGCTAT 60.931 66.667 18.49 1.67 39.21 2.97
86 87 1.153349 GACCCTCCGCACTTGGATC 60.153 63.158 0.00 0.00 37.41 3.36
87 88 2.670148 GGACCCTCCGCACTTGGAT 61.670 63.158 0.00 0.00 37.41 3.41
92 95 4.640690 ACAGGGACCCTCCGCACT 62.641 66.667 11.23 0.00 37.43 4.40
278 283 2.706432 CACACAAGCAACGTCGCA 59.294 55.556 0.00 0.00 0.00 5.10
283 288 1.711060 AACCGACCACACAAGCAACG 61.711 55.000 0.00 0.00 0.00 4.10
313 318 0.037303 ACAACAGGAGCAGACCCATG 59.963 55.000 0.00 0.00 0.00 3.66
314 319 0.326264 GACAACAGGAGCAGACCCAT 59.674 55.000 0.00 0.00 0.00 4.00
411 416 2.301009 CACTACCGTTTCACCTAGGGTT 59.699 50.000 14.81 0.00 35.54 4.11
413 418 1.206371 CCACTACCGTTTCACCTAGGG 59.794 57.143 14.81 2.03 0.00 3.53
417 422 1.373812 GGCCACTACCGTTTCACCT 59.626 57.895 0.00 0.00 0.00 4.00
594 603 0.820482 AAGGTAACGTGTTGTGGCCC 60.820 55.000 0.00 0.00 46.39 5.80
617 628 6.820656 AGATACAAAATGCTCAGTAGGACAAG 59.179 38.462 0.00 0.00 0.00 3.16
622 633 8.723942 AGTAAAGATACAAAATGCTCAGTAGG 57.276 34.615 0.00 0.00 34.29 3.18
666 680 7.279615 TCAACCGGTCAGAATTGTATGATAAT 58.720 34.615 8.04 0.00 0.00 1.28
671 685 4.035558 CCATCAACCGGTCAGAATTGTATG 59.964 45.833 8.04 7.26 0.00 2.39
674 688 2.436417 CCATCAACCGGTCAGAATTGT 58.564 47.619 8.04 0.00 0.00 2.71
675 689 1.133025 GCCATCAACCGGTCAGAATTG 59.867 52.381 8.04 0.20 0.00 2.32
694 708 7.891723 TGTTGTTTTAAACGAAATTAACAACGC 59.108 29.630 22.15 10.46 43.25 4.84
707 721 7.534578 TGACAAACACTACTGTTGTTTTAAACG 59.465 33.333 7.65 1.13 39.88 3.60
708 722 8.730970 TGACAAACACTACTGTTGTTTTAAAC 57.269 30.769 7.65 0.20 39.88 2.01
711 750 9.991388 GTAATGACAAACACTACTGTTGTTTTA 57.009 29.630 7.65 0.51 39.88 1.52
720 759 9.555727 ACATTACTTGTAATGACAAACACTACT 57.444 29.630 29.18 8.83 44.90 2.57
727 766 7.572353 GCCTCGAACATTACTTGTAATGACAAA 60.572 37.037 29.18 15.96 44.90 2.83
728 767 6.128391 GCCTCGAACATTACTTGTAATGACAA 60.128 38.462 29.18 15.71 43.41 3.18
730 769 5.350365 TGCCTCGAACATTACTTGTAATGAC 59.650 40.000 29.18 22.06 39.20 3.06
744 784 2.268920 GCCATCCTGCCTCGAACA 59.731 61.111 0.00 0.00 0.00 3.18
763 803 5.063204 CACCTCACAAGTATTTGAACCTCA 58.937 41.667 4.81 0.00 37.73 3.86
818 858 3.311110 GGACACCGCCTCCAGTGA 61.311 66.667 0.00 0.00 37.43 3.41
980 1039 4.790123 GCATATCACTCACTCACGTACCTC 60.790 50.000 0.00 0.00 0.00 3.85
1034 1093 2.272170 AGGGGATGGGGGAGGAAGA 61.272 63.158 0.00 0.00 0.00 2.87
1184 1246 2.681778 AGGTGCAGTCGAGGAGGG 60.682 66.667 0.00 0.00 0.00 4.30
1439 1522 2.229784 CTGGATCCTGTGGTTTTTCAGC 59.770 50.000 14.23 0.00 0.00 4.26
1442 1525 2.489722 GCTCTGGATCCTGTGGTTTTTC 59.510 50.000 14.23 0.00 0.00 2.29
1444 1527 1.611673 CGCTCTGGATCCTGTGGTTTT 60.612 52.381 14.23 0.00 0.00 2.43
1445 1528 0.036010 CGCTCTGGATCCTGTGGTTT 60.036 55.000 14.23 0.00 0.00 3.27
1641 1733 2.574399 GAAGCGGAAGAGCGACCT 59.426 61.111 0.00 0.00 43.00 3.85
1642 1734 2.881352 CGAAGCGGAAGAGCGACC 60.881 66.667 0.00 0.00 43.00 4.79
1739 1831 2.499214 GATGAGGTCGACTGAGCCT 58.501 57.895 16.46 2.90 43.71 4.58
1749 1841 3.594603 TGGAGAAGAAACGATGAGGTC 57.405 47.619 0.00 0.00 0.00 3.85
1750 1842 3.515502 TGATGGAGAAGAAACGATGAGGT 59.484 43.478 0.00 0.00 0.00 3.85
1751 1843 4.128925 TGATGGAGAAGAAACGATGAGG 57.871 45.455 0.00 0.00 0.00 3.86
1752 1844 5.814188 TCATTGATGGAGAAGAAACGATGAG 59.186 40.000 0.00 0.00 0.00 2.90
1758 1850 6.376581 ACCAAGATCATTGATGGAGAAGAAAC 59.623 38.462 10.97 0.00 36.75 2.78
1775 1867 4.261909 GGATCATTCATGCCAACCAAGATC 60.262 45.833 0.00 0.00 0.00 2.75
1777 1872 3.025978 GGATCATTCATGCCAACCAAGA 58.974 45.455 0.00 0.00 0.00 3.02
1782 1877 0.670162 CCCGGATCATTCATGCCAAC 59.330 55.000 0.73 0.00 0.00 3.77
1784 1879 1.529010 GCCCGGATCATTCATGCCA 60.529 57.895 0.73 0.00 0.00 4.92
1910 2019 1.992170 CTGCAACGGACCAGTACTAC 58.008 55.000 0.00 0.00 0.00 2.73
1928 2037 4.236935 CAACTCACGCAAATTAATTGGCT 58.763 39.130 22.25 9.21 39.54 4.75
1929 2038 3.367630 CCAACTCACGCAAATTAATTGGC 59.632 43.478 16.39 16.39 39.54 4.52
1930 2039 4.804108 TCCAACTCACGCAAATTAATTGG 58.196 39.130 0.39 0.00 39.54 3.16
1931 2040 5.227805 CGATCCAACTCACGCAAATTAATTG 59.772 40.000 0.39 0.00 42.21 2.32
1932 2041 5.331902 CGATCCAACTCACGCAAATTAATT 58.668 37.500 0.00 0.00 0.00 1.40
2163 2272 6.556974 TCACTGAGAATCTGAGATGGAAAT 57.443 37.500 3.22 0.00 37.51 2.17
2164 2273 6.556974 ATCACTGAGAATCTGAGATGGAAA 57.443 37.500 3.22 0.00 41.29 3.13
2181 2290 4.025896 GTCAAGCGAGATGAATCATCACTG 60.026 45.833 23.41 13.75 42.72 3.66
2191 2300 3.317603 TGAACATGTCAAGCGAGATGA 57.682 42.857 0.00 0.00 43.88 2.92
2198 2307 4.419522 ACGGTTAATGAACATGTCAAGC 57.580 40.909 0.00 0.00 40.50 4.01
2205 2314 8.611654 AAGTTACTACAACGGTTAATGAACAT 57.388 30.769 0.00 0.00 37.29 2.71
2355 2490 4.840680 TGACCTCAAATGAAGAGAAGAGGA 59.159 41.667 12.76 0.00 44.12 3.71
2456 2591 8.060075 GCGGGGACTACATATATATATATCCCT 58.940 40.741 24.84 11.17 32.41 4.20
2457 2592 7.837689 TGCGGGGACTACATATATATATATCCC 59.162 40.741 21.00 21.00 31.64 3.85
2458 2593 8.818622 TGCGGGGACTACATATATATATATCC 57.181 38.462 11.62 10.44 0.00 2.59
2459 2594 9.682465 TCTGCGGGGACTACATATATATATATC 57.318 37.037 11.62 2.77 0.00 1.63
2461 2596 9.871175 TTTCTGCGGGGACTACATATATATATA 57.129 33.333 4.90 4.92 0.00 0.86
2462 2597 8.777578 TTTCTGCGGGGACTACATATATATAT 57.222 34.615 0.00 0.00 0.00 0.86
2475 2610 1.377333 CTCCCTTTTCTGCGGGGAC 60.377 63.158 0.00 0.00 43.58 4.46
2612 2747 4.035909 CAGTGCTTATCATGCATGTTGCTA 59.964 41.667 25.43 7.04 45.31 3.49
2673 2812 6.712549 AGAAACGTAAACTGTAAGCTTTCAC 58.287 36.000 3.20 0.00 37.60 3.18
2822 2961 5.869344 TGCAGCTGTCAGTTACTACTAATTG 59.131 40.000 16.64 0.00 31.96 2.32
3072 3211 2.103143 CAGTAGCCGACGAGCTGG 59.897 66.667 17.58 0.00 44.67 4.85
3327 3466 1.661112 GCCTTCTTGATGTCGTAGCAC 59.339 52.381 0.00 0.00 0.00 4.40
3366 3505 2.033194 GTAGAAGTGCGTGCCCCAC 61.033 63.158 0.00 0.00 0.00 4.61
3422 3561 3.587797 TTGTTCTACACCTCGGCTAAG 57.412 47.619 0.00 0.00 0.00 2.18
3437 3583 2.034076 GCGTGTCGTTGTTGATTGTTC 58.966 47.619 0.00 0.00 0.00 3.18
3526 3676 0.383590 CTGATCACGATCGGCTGAGT 59.616 55.000 20.98 5.39 40.63 3.41
3547 3697 7.028361 ACTAACACTAGAATTAGCAAGACGTC 58.972 38.462 7.70 7.70 32.58 4.34
3578 3729 1.440850 CGATTGCTGTTGTGTGCGG 60.441 57.895 0.00 0.00 0.00 5.69
3597 3748 0.743701 AGGCTCGAGCTCTGCAATTG 60.744 55.000 34.46 0.00 41.70 2.32
3604 3755 3.055819 TGTCAAAATTAGGCTCGAGCTCT 60.056 43.478 34.46 29.12 41.70 4.09
3605 3756 3.262420 TGTCAAAATTAGGCTCGAGCTC 58.738 45.455 34.46 24.39 41.70 4.09
3610 3761 5.048713 ACTTCCTTTGTCAAAATTAGGCTCG 60.049 40.000 0.00 0.00 0.00 5.03
3640 3791 4.170256 GTTTCAGAAACAACGGCTTCAAA 58.830 39.130 19.46 0.00 41.04 2.69
3642 3793 3.414549 GTTTCAGAAACAACGGCTTCA 57.585 42.857 19.46 0.00 41.04 3.02
3652 3803 7.042254 ACTCTTACCGTGTAATGTTTCAGAAAC 60.042 37.037 17.85 17.85 41.73 2.78
3653 3804 6.987992 ACTCTTACCGTGTAATGTTTCAGAAA 59.012 34.615 0.00 0.00 0.00 2.52
3654 3805 6.518493 ACTCTTACCGTGTAATGTTTCAGAA 58.482 36.000 0.00 0.00 0.00 3.02
3655 3806 6.092955 ACTCTTACCGTGTAATGTTTCAGA 57.907 37.500 0.00 0.00 0.00 3.27
3656 3807 7.974501 AGATACTCTTACCGTGTAATGTTTCAG 59.025 37.037 14.28 0.00 0.00 3.02
3657 3808 7.833786 AGATACTCTTACCGTGTAATGTTTCA 58.166 34.615 14.28 0.00 0.00 2.69
3658 3809 7.972277 TGAGATACTCTTACCGTGTAATGTTTC 59.028 37.037 0.00 5.40 0.00 2.78
3659 3810 7.833786 TGAGATACTCTTACCGTGTAATGTTT 58.166 34.615 0.00 0.00 0.00 2.83
3660 3811 7.400599 TGAGATACTCTTACCGTGTAATGTT 57.599 36.000 0.00 0.00 0.00 2.71
3661 3812 6.039493 CCTGAGATACTCTTACCGTGTAATGT 59.961 42.308 0.00 3.70 0.00 2.71
3662 3813 6.262496 TCCTGAGATACTCTTACCGTGTAATG 59.738 42.308 0.00 0.00 0.00 1.90
3663 3814 6.262720 GTCCTGAGATACTCTTACCGTGTAAT 59.737 42.308 0.00 0.00 0.00 1.89
3664 3815 5.587844 GTCCTGAGATACTCTTACCGTGTAA 59.412 44.000 0.00 0.00 0.00 2.41
3665 3816 5.121811 GTCCTGAGATACTCTTACCGTGTA 58.878 45.833 0.00 0.00 0.00 2.90
3666 3817 3.946558 GTCCTGAGATACTCTTACCGTGT 59.053 47.826 0.00 0.00 0.00 4.49
3667 3818 3.002451 CGTCCTGAGATACTCTTACCGTG 59.998 52.174 0.00 0.00 0.00 4.94
3668 3819 3.204526 CGTCCTGAGATACTCTTACCGT 58.795 50.000 0.00 0.00 0.00 4.83
3669 3820 2.031857 GCGTCCTGAGATACTCTTACCG 60.032 54.545 0.00 0.00 0.00 4.02
3670 3821 2.293955 GGCGTCCTGAGATACTCTTACC 59.706 54.545 0.00 0.00 0.00 2.85
3671 3822 3.215975 AGGCGTCCTGAGATACTCTTAC 58.784 50.000 0.00 0.00 29.57 2.34
3672 3823 3.118000 TGAGGCGTCCTGAGATACTCTTA 60.118 47.826 3.56 0.00 31.76 2.10
3673 3824 2.303175 GAGGCGTCCTGAGATACTCTT 58.697 52.381 2.98 0.00 31.76 2.85
3674 3825 1.213182 TGAGGCGTCCTGAGATACTCT 59.787 52.381 3.56 0.00 31.76 3.24
3675 3826 1.681538 TGAGGCGTCCTGAGATACTC 58.318 55.000 3.56 0.00 31.76 2.59
3676 3827 2.373335 ATGAGGCGTCCTGAGATACT 57.627 50.000 3.56 0.00 31.76 2.12
3677 3828 2.095668 CGTATGAGGCGTCCTGAGATAC 60.096 54.545 3.56 4.18 31.76 2.24
3678 3829 2.152016 CGTATGAGGCGTCCTGAGATA 58.848 52.381 3.56 0.00 31.76 1.98
3679 3830 0.955178 CGTATGAGGCGTCCTGAGAT 59.045 55.000 3.56 0.00 31.76 2.75
3680 3831 1.725557 GCGTATGAGGCGTCCTGAGA 61.726 60.000 3.56 0.00 31.76 3.27
3681 3832 1.299468 GCGTATGAGGCGTCCTGAG 60.299 63.158 3.56 0.00 31.76 3.35
3682 3833 2.782222 GGCGTATGAGGCGTCCTGA 61.782 63.158 3.56 0.00 31.76 3.86
3683 3834 2.279517 GGCGTATGAGGCGTCCTG 60.280 66.667 3.56 0.00 31.76 3.86
3684 3835 2.442272 AGGCGTATGAGGCGTCCT 60.442 61.111 3.56 0.00 41.99 3.85
3685 3836 2.279517 CAGGCGTATGAGGCGTCC 60.280 66.667 3.56 0.00 41.99 4.79
3686 3837 2.962253 GCAGGCGTATGAGGCGTC 60.962 66.667 0.00 0.00 41.99 5.19
3687 3838 3.723235 CTGCAGGCGTATGAGGCGT 62.723 63.158 5.57 0.00 41.99 5.68
3688 3839 2.963854 CTGCAGGCGTATGAGGCG 60.964 66.667 5.57 0.00 41.99 5.52
3689 3840 1.884926 GTCTGCAGGCGTATGAGGC 60.885 63.158 15.13 0.00 0.00 4.70
3690 3841 1.589993 CGTCTGCAGGCGTATGAGG 60.590 63.158 31.70 2.27 0.00 3.86
3691 3842 2.233654 GCGTCTGCAGGCGTATGAG 61.234 63.158 37.82 13.23 42.15 2.90
3692 3843 2.202743 GCGTCTGCAGGCGTATGA 60.203 61.111 37.82 3.76 42.15 2.15
3700 3851 3.782244 GACCAAGCGCGTCTGCAG 61.782 66.667 7.63 7.63 42.97 4.41
3701 3852 4.600576 TGACCAAGCGCGTCTGCA 62.601 61.111 8.43 3.70 42.97 4.41
3702 3853 3.782244 CTGACCAAGCGCGTCTGC 61.782 66.667 8.43 1.17 37.91 4.26
3703 3854 2.356313 ACTGACCAAGCGCGTCTG 60.356 61.111 8.43 15.61 35.84 3.51
3704 3855 2.356313 CACTGACCAAGCGCGTCT 60.356 61.111 8.43 1.94 0.00 4.18
3705 3856 2.355837 TCACTGACCAAGCGCGTC 60.356 61.111 8.43 4.09 0.00 5.19
3706 3857 2.661866 GTCACTGACCAAGCGCGT 60.662 61.111 8.43 0.00 0.00 6.01
3715 3866 4.060038 TCTCTCTTGTTTGGTCACTGAC 57.940 45.455 0.00 0.00 0.00 3.51
3716 3867 4.753516 TTCTCTCTTGTTTGGTCACTGA 57.246 40.909 0.00 0.00 0.00 3.41
3717 3868 6.459066 TCTATTCTCTCTTGTTTGGTCACTG 58.541 40.000 0.00 0.00 0.00 3.66
3718 3869 6.672266 TCTATTCTCTCTTGTTTGGTCACT 57.328 37.500 0.00 0.00 0.00 3.41
3719 3870 7.730364 TTTCTATTCTCTCTTGTTTGGTCAC 57.270 36.000 0.00 0.00 0.00 3.67
3720 3871 8.746052 TTTTTCTATTCTCTCTTGTTTGGTCA 57.254 30.769 0.00 0.00 0.00 4.02
3743 3894 2.294979 GTCGAGTTGGGTCACCTTTTT 58.705 47.619 0.00 0.00 37.76 1.94
3744 3895 1.476291 GGTCGAGTTGGGTCACCTTTT 60.476 52.381 0.00 0.00 37.76 2.27
3745 3896 0.108019 GGTCGAGTTGGGTCACCTTT 59.892 55.000 0.00 0.00 37.76 3.11
3746 3897 1.752833 GGTCGAGTTGGGTCACCTT 59.247 57.895 0.00 0.00 37.76 3.50
3747 3898 2.214920 GGGTCGAGTTGGGTCACCT 61.215 63.158 0.00 0.00 37.76 4.00
3748 3899 2.346365 GGGTCGAGTTGGGTCACC 59.654 66.667 0.00 0.00 37.24 4.02
3749 3900 2.168666 GAGGGGTCGAGTTGGGTCAC 62.169 65.000 0.00 0.00 0.00 3.67
3750 3901 1.911766 GAGGGGTCGAGTTGGGTCA 60.912 63.158 0.00 0.00 0.00 4.02
3751 3902 2.979649 GAGGGGTCGAGTTGGGTC 59.020 66.667 0.00 0.00 0.00 4.46
3752 3903 2.430704 TACGAGGGGTCGAGTTGGGT 62.431 60.000 1.09 0.00 36.85 4.51
3753 3904 1.041447 ATACGAGGGGTCGAGTTGGG 61.041 60.000 1.09 0.00 36.85 4.12
3754 3905 0.384669 GATACGAGGGGTCGAGTTGG 59.615 60.000 1.09 0.00 36.85 3.77
3755 3906 1.100510 TGATACGAGGGGTCGAGTTG 58.899 55.000 1.09 0.00 36.85 3.16
3756 3907 1.955080 GATGATACGAGGGGTCGAGTT 59.045 52.381 1.09 0.00 36.85 3.01
3757 3908 1.143277 AGATGATACGAGGGGTCGAGT 59.857 52.381 1.09 0.00 36.85 4.18
3758 3909 1.898902 AGATGATACGAGGGGTCGAG 58.101 55.000 1.09 0.00 36.85 4.04
3759 3910 2.359981 AAGATGATACGAGGGGTCGA 57.640 50.000 1.09 0.00 36.85 4.20
3760 3911 4.785511 ATAAAGATGATACGAGGGGTCG 57.214 45.455 0.00 0.00 39.31 4.79
3761 3912 7.171630 ACATATAAAGATGATACGAGGGGTC 57.828 40.000 0.00 0.00 0.00 4.46
3762 3913 6.154706 GGACATATAAAGATGATACGAGGGGT 59.845 42.308 0.00 0.00 0.00 4.95
3763 3914 6.574350 GGACATATAAAGATGATACGAGGGG 58.426 44.000 0.00 0.00 0.00 4.79
3764 3915 6.266323 CGGACATATAAAGATGATACGAGGG 58.734 44.000 0.00 0.00 0.00 4.30
3765 3916 6.266323 CCGGACATATAAAGATGATACGAGG 58.734 44.000 0.00 0.00 0.00 4.63
3766 3917 6.266323 CCCGGACATATAAAGATGATACGAG 58.734 44.000 0.73 0.00 0.00 4.18
3767 3918 5.393787 GCCCGGACATATAAAGATGATACGA 60.394 44.000 0.73 0.00 0.00 3.43
3768 3919 4.804139 GCCCGGACATATAAAGATGATACG 59.196 45.833 0.73 0.00 0.00 3.06
3769 3920 5.812642 CAGCCCGGACATATAAAGATGATAC 59.187 44.000 0.73 0.00 0.00 2.24
3770 3921 5.483937 ACAGCCCGGACATATAAAGATGATA 59.516 40.000 0.73 0.00 0.00 2.15
3771 3922 4.287067 ACAGCCCGGACATATAAAGATGAT 59.713 41.667 0.73 0.00 0.00 2.45
3772 3923 3.646162 ACAGCCCGGACATATAAAGATGA 59.354 43.478 0.73 0.00 0.00 2.92
3773 3924 4.008074 ACAGCCCGGACATATAAAGATG 57.992 45.455 0.73 0.00 0.00 2.90
3774 3925 4.706842 AACAGCCCGGACATATAAAGAT 57.293 40.909 0.73 0.00 0.00 2.40
3775 3926 4.196193 CAAACAGCCCGGACATATAAAGA 58.804 43.478 0.73 0.00 0.00 2.52
3776 3927 3.243068 GCAAACAGCCCGGACATATAAAG 60.243 47.826 0.73 0.00 37.23 1.85
3777 3928 2.685897 GCAAACAGCCCGGACATATAAA 59.314 45.455 0.73 0.00 37.23 1.40
3778 3929 2.294074 GCAAACAGCCCGGACATATAA 58.706 47.619 0.73 0.00 37.23 0.98
3779 3930 1.808512 CGCAAACAGCCCGGACATATA 60.809 52.381 0.73 0.00 41.38 0.86
3780 3931 1.095228 CGCAAACAGCCCGGACATAT 61.095 55.000 0.73 0.00 41.38 1.78
3781 3932 1.743623 CGCAAACAGCCCGGACATA 60.744 57.895 0.73 0.00 41.38 2.29
3782 3933 3.055719 CGCAAACAGCCCGGACAT 61.056 61.111 0.73 0.00 41.38 3.06
3783 3934 3.758973 TTCGCAAACAGCCCGGACA 62.759 57.895 0.73 0.00 41.38 4.02
3784 3935 2.975799 TTCGCAAACAGCCCGGAC 60.976 61.111 0.73 0.00 41.38 4.79
3785 3936 2.975799 GTTCGCAAACAGCCCGGA 60.976 61.111 0.73 0.00 41.38 5.14
3786 3937 4.038080 GGTTCGCAAACAGCCCGG 62.038 66.667 0.00 0.00 41.38 5.73
3787 3938 4.038080 GGGTTCGCAAACAGCCCG 62.038 66.667 0.00 0.00 41.38 6.13
3788 3939 2.597510 AGGGTTCGCAAACAGCCC 60.598 61.111 0.00 0.00 41.38 5.19
3789 3940 1.244019 ATGAGGGTTCGCAAACAGCC 61.244 55.000 0.00 0.00 41.38 4.85
3790 3941 1.448985 TATGAGGGTTCGCAAACAGC 58.551 50.000 0.00 0.00 37.10 4.40
3791 3942 2.614057 GGATATGAGGGTTCGCAAACAG 59.386 50.000 0.00 0.00 37.10 3.16
3792 3943 2.026729 TGGATATGAGGGTTCGCAAACA 60.027 45.455 0.00 0.00 37.10 2.83
3793 3944 2.639065 TGGATATGAGGGTTCGCAAAC 58.361 47.619 0.00 0.00 34.46 2.93
3794 3945 3.136443 AGATGGATATGAGGGTTCGCAAA 59.864 43.478 0.00 0.00 0.00 3.68
3795 3946 2.705658 AGATGGATATGAGGGTTCGCAA 59.294 45.455 0.00 0.00 0.00 4.85
3796 3947 2.300152 GAGATGGATATGAGGGTTCGCA 59.700 50.000 0.00 0.00 0.00 5.10
3797 3948 2.300152 TGAGATGGATATGAGGGTTCGC 59.700 50.000 0.00 0.00 0.00 4.70
3798 3949 4.607293 TTGAGATGGATATGAGGGTTCG 57.393 45.455 0.00 0.00 0.00 3.95
3799 3950 6.537355 TCATTTGAGATGGATATGAGGGTTC 58.463 40.000 0.00 0.00 0.00 3.62
3800 3951 6.520021 TCATTTGAGATGGATATGAGGGTT 57.480 37.500 0.00 0.00 0.00 4.11
3801 3952 6.520021 TTCATTTGAGATGGATATGAGGGT 57.480 37.500 0.00 0.00 0.00 4.34
3802 3953 6.946583 ACATTCATTTGAGATGGATATGAGGG 59.053 38.462 0.00 0.00 0.00 4.30
3803 3954 7.997773 ACATTCATTTGAGATGGATATGAGG 57.002 36.000 0.00 0.00 0.00 3.86
3804 3955 9.163899 CCTACATTCATTTGAGATGGATATGAG 57.836 37.037 0.00 0.00 0.00 2.90
3805 3956 8.105197 CCCTACATTCATTTGAGATGGATATGA 58.895 37.037 0.00 0.00 0.00 2.15
3806 3957 8.105197 TCCCTACATTCATTTGAGATGGATATG 58.895 37.037 0.00 0.00 0.00 1.78
3807 3958 8.223378 TCCCTACATTCATTTGAGATGGATAT 57.777 34.615 0.00 0.00 0.00 1.63
3808 3959 7.256799 CCTCCCTACATTCATTTGAGATGGATA 60.257 40.741 0.00 0.00 0.00 2.59
3809 3960 6.466904 CCTCCCTACATTCATTTGAGATGGAT 60.467 42.308 0.00 0.00 0.00 3.41
3810 3961 5.163163 CCTCCCTACATTCATTTGAGATGGA 60.163 44.000 0.00 0.00 0.00 3.41
3811 3962 5.068636 CCTCCCTACATTCATTTGAGATGG 58.931 45.833 0.00 0.00 0.00 3.51
3812 3963 5.933617 TCCTCCCTACATTCATTTGAGATG 58.066 41.667 0.00 0.00 0.00 2.90
3813 3964 6.776887 ATCCTCCCTACATTCATTTGAGAT 57.223 37.500 0.00 0.00 0.00 2.75
3814 3965 7.513781 TCATATCCTCCCTACATTCATTTGAGA 59.486 37.037 0.00 0.00 0.00 3.27
3815 3966 7.683578 TCATATCCTCCCTACATTCATTTGAG 58.316 38.462 0.00 0.00 0.00 3.02
3816 3967 7.256799 CCTCATATCCTCCCTACATTCATTTGA 60.257 40.741 0.00 0.00 0.00 2.69
3817 3968 6.883217 CCTCATATCCTCCCTACATTCATTTG 59.117 42.308 0.00 0.00 0.00 2.32
3818 3969 6.012157 CCCTCATATCCTCCCTACATTCATTT 60.012 42.308 0.00 0.00 0.00 2.32
3819 3970 5.490357 CCCTCATATCCTCCCTACATTCATT 59.510 44.000 0.00 0.00 0.00 2.57
3820 3971 5.035556 CCCTCATATCCTCCCTACATTCAT 58.964 45.833 0.00 0.00 0.00 2.57
3821 3972 4.429505 CCCTCATATCCTCCCTACATTCA 58.570 47.826 0.00 0.00 0.00 2.57
3822 3973 3.198853 GCCCTCATATCCTCCCTACATTC 59.801 52.174 0.00 0.00 0.00 2.67
3823 3974 3.181390 AGCCCTCATATCCTCCCTACATT 60.181 47.826 0.00 0.00 0.00 2.71
3824 3975 2.388563 AGCCCTCATATCCTCCCTACAT 59.611 50.000 0.00 0.00 0.00 2.29
3825 3976 1.795786 AGCCCTCATATCCTCCCTACA 59.204 52.381 0.00 0.00 0.00 2.74
3826 3977 2.043801 AGAGCCCTCATATCCTCCCTAC 59.956 54.545 0.00 0.00 0.00 3.18
3827 3978 2.373174 AGAGCCCTCATATCCTCCCTA 58.627 52.381 0.00 0.00 0.00 3.53
3828 3979 1.175262 AGAGCCCTCATATCCTCCCT 58.825 55.000 0.00 0.00 0.00 4.20
3829 3980 2.037385 AAGAGCCCTCATATCCTCCC 57.963 55.000 0.00 0.00 0.00 4.30
3830 3981 3.247162 AGAAAGAGCCCTCATATCCTCC 58.753 50.000 0.00 0.00 0.00 4.30
3831 3982 4.159557 AGAGAAAGAGCCCTCATATCCTC 58.840 47.826 0.00 0.00 32.07 3.71
3832 3983 4.212070 AGAGAAAGAGCCCTCATATCCT 57.788 45.455 0.00 0.00 32.07 3.24
3833 3984 4.972751 AAGAGAAAGAGCCCTCATATCC 57.027 45.455 0.00 0.00 32.07 2.59
3834 3985 6.173427 AGAAAGAGAAAGAGCCCTCATATC 57.827 41.667 0.00 0.00 32.07 1.63
3835 3986 6.573712 AAGAAAGAGAAAGAGCCCTCATAT 57.426 37.500 0.00 0.00 32.07 1.78
3836 3987 6.380079 AAAGAAAGAGAAAGAGCCCTCATA 57.620 37.500 0.00 0.00 32.07 2.15
3837 3988 4.925390 AAGAAAGAGAAAGAGCCCTCAT 57.075 40.909 0.00 0.00 32.07 2.90
3838 3989 4.713792 AAAGAAAGAGAAAGAGCCCTCA 57.286 40.909 0.00 0.00 32.07 3.86
3839 3990 6.881602 TGAATAAAGAAAGAGAAAGAGCCCTC 59.118 38.462 0.00 0.00 0.00 4.30
3840 3991 6.784031 TGAATAAAGAAAGAGAAAGAGCCCT 58.216 36.000 0.00 0.00 0.00 5.19
3841 3992 7.637631 ATGAATAAAGAAAGAGAAAGAGCCC 57.362 36.000 0.00 0.00 0.00 5.19
3842 3993 8.955388 AGAATGAATAAAGAAAGAGAAAGAGCC 58.045 33.333 0.00 0.00 0.00 4.70
3871 4022 6.364701 TGGTGGAGATGAAGAGAAAGAAAAA 58.635 36.000 0.00 0.00 0.00 1.94
3872 4023 5.940617 TGGTGGAGATGAAGAGAAAGAAAA 58.059 37.500 0.00 0.00 0.00 2.29
3873 4024 5.567037 TGGTGGAGATGAAGAGAAAGAAA 57.433 39.130 0.00 0.00 0.00 2.52
3874 4025 5.567037 TTGGTGGAGATGAAGAGAAAGAA 57.433 39.130 0.00 0.00 0.00 2.52
3875 4026 5.249163 TGATTGGTGGAGATGAAGAGAAAGA 59.751 40.000 0.00 0.00 0.00 2.52
3876 4027 5.353678 GTGATTGGTGGAGATGAAGAGAAAG 59.646 44.000 0.00 0.00 0.00 2.62
3877 4028 5.248640 GTGATTGGTGGAGATGAAGAGAAA 58.751 41.667 0.00 0.00 0.00 2.52
3878 4029 4.621510 CGTGATTGGTGGAGATGAAGAGAA 60.622 45.833 0.00 0.00 0.00 2.87
3879 4030 3.118992 CGTGATTGGTGGAGATGAAGAGA 60.119 47.826 0.00 0.00 0.00 3.10
3880 4031 3.193263 CGTGATTGGTGGAGATGAAGAG 58.807 50.000 0.00 0.00 0.00 2.85
3881 4032 2.567169 ACGTGATTGGTGGAGATGAAGA 59.433 45.455 0.00 0.00 0.00 2.87
3882 4033 2.674852 CACGTGATTGGTGGAGATGAAG 59.325 50.000 10.90 0.00 0.00 3.02
3883 4034 2.698803 CACGTGATTGGTGGAGATGAA 58.301 47.619 10.90 0.00 0.00 2.57
3884 4035 1.675714 GCACGTGATTGGTGGAGATGA 60.676 52.381 22.23 0.00 35.94 2.92
3885 4036 0.729116 GCACGTGATTGGTGGAGATG 59.271 55.000 22.23 0.00 35.94 2.90
3886 4037 0.324614 TGCACGTGATTGGTGGAGAT 59.675 50.000 22.23 0.00 35.94 2.75
3887 4038 0.107643 TTGCACGTGATTGGTGGAGA 59.892 50.000 22.23 0.00 37.06 3.71
3888 4039 0.518636 CTTGCACGTGATTGGTGGAG 59.481 55.000 22.23 0.38 37.06 3.86
3889 4040 0.179032 ACTTGCACGTGATTGGTGGA 60.179 50.000 22.23 0.00 35.94 4.02
3890 4041 0.040157 CACTTGCACGTGATTGGTGG 60.040 55.000 22.23 3.78 37.06 4.61
3891 4042 0.943673 TCACTTGCACGTGATTGGTG 59.056 50.000 20.99 19.72 38.89 4.17
3892 4043 0.944386 GTCACTTGCACGTGATTGGT 59.056 50.000 26.42 8.84 44.84 3.67
3893 4044 0.238289 GGTCACTTGCACGTGATTGG 59.762 55.000 26.42 8.17 44.84 3.16
3894 4045 0.110688 CGGTCACTTGCACGTGATTG 60.111 55.000 26.42 18.26 44.84 2.67
3895 4046 1.227999 CCGGTCACTTGCACGTGATT 61.228 55.000 26.42 0.00 44.84 2.57
3896 4047 1.667830 CCGGTCACTTGCACGTGAT 60.668 57.895 26.42 0.00 44.84 3.06
3897 4048 2.094757 ATCCGGTCACTTGCACGTGA 62.095 55.000 20.99 20.99 41.33 4.35
3898 4049 0.389296 TATCCGGTCACTTGCACGTG 60.389 55.000 16.76 16.76 36.25 4.49
3899 4050 0.535335 ATATCCGGTCACTTGCACGT 59.465 50.000 0.00 0.00 0.00 4.49
3900 4051 2.502213 TATATCCGGTCACTTGCACG 57.498 50.000 0.00 0.00 0.00 5.34
3901 4052 3.990092 TCATATATCCGGTCACTTGCAC 58.010 45.455 0.00 0.00 0.00 4.57
3902 4053 3.006859 CCTCATATATCCGGTCACTTGCA 59.993 47.826 0.00 0.00 0.00 4.08
3903 4054 3.258372 TCCTCATATATCCGGTCACTTGC 59.742 47.826 0.00 0.00 0.00 4.01
3904 4055 5.243954 TCTTCCTCATATATCCGGTCACTTG 59.756 44.000 0.00 0.00 0.00 3.16
3905 4056 5.394738 TCTTCCTCATATATCCGGTCACTT 58.605 41.667 0.00 0.00 0.00 3.16
3906 4057 4.999310 TCTTCCTCATATATCCGGTCACT 58.001 43.478 0.00 0.00 0.00 3.41
3907 4058 5.723672 TTCTTCCTCATATATCCGGTCAC 57.276 43.478 0.00 0.00 0.00 3.67
3908 4059 6.740944 TTTTCTTCCTCATATATCCGGTCA 57.259 37.500 0.00 0.00 0.00 4.02
3909 4060 7.386851 TCATTTTCTTCCTCATATATCCGGTC 58.613 38.462 0.00 0.00 0.00 4.79
3910 4061 7.316393 TCATTTTCTTCCTCATATATCCGGT 57.684 36.000 0.00 0.00 0.00 5.28
3911 4062 6.820656 CCTCATTTTCTTCCTCATATATCCGG 59.179 42.308 0.00 0.00 0.00 5.14
3912 4063 7.615403 TCCTCATTTTCTTCCTCATATATCCG 58.385 38.462 0.00 0.00 0.00 4.18
3913 4064 9.972106 AATCCTCATTTTCTTCCTCATATATCC 57.028 33.333 0.00 0.00 0.00 2.59
3916 4067 9.565090 CACAATCCTCATTTTCTTCCTCATATA 57.435 33.333 0.00 0.00 0.00 0.86
3917 4068 7.504911 CCACAATCCTCATTTTCTTCCTCATAT 59.495 37.037 0.00 0.00 0.00 1.78
3918 4069 6.830324 CCACAATCCTCATTTTCTTCCTCATA 59.170 38.462 0.00 0.00 0.00 2.15
3919 4070 5.655532 CCACAATCCTCATTTTCTTCCTCAT 59.344 40.000 0.00 0.00 0.00 2.90
3920 4071 5.012239 CCACAATCCTCATTTTCTTCCTCA 58.988 41.667 0.00 0.00 0.00 3.86
3921 4072 4.142293 GCCACAATCCTCATTTTCTTCCTC 60.142 45.833 0.00 0.00 0.00 3.71
3922 4073 3.766051 GCCACAATCCTCATTTTCTTCCT 59.234 43.478 0.00 0.00 0.00 3.36
3923 4074 3.766051 AGCCACAATCCTCATTTTCTTCC 59.234 43.478 0.00 0.00 0.00 3.46
3924 4075 4.741342 CAGCCACAATCCTCATTTTCTTC 58.259 43.478 0.00 0.00 0.00 2.87
3925 4076 3.056322 GCAGCCACAATCCTCATTTTCTT 60.056 43.478 0.00 0.00 0.00 2.52
3926 4077 2.494870 GCAGCCACAATCCTCATTTTCT 59.505 45.455 0.00 0.00 0.00 2.52
3927 4078 2.733227 CGCAGCCACAATCCTCATTTTC 60.733 50.000 0.00 0.00 0.00 2.29
3928 4079 1.203052 CGCAGCCACAATCCTCATTTT 59.797 47.619 0.00 0.00 0.00 1.82
3929 4080 0.813184 CGCAGCCACAATCCTCATTT 59.187 50.000 0.00 0.00 0.00 2.32
3930 4081 2.485677 CGCAGCCACAATCCTCATT 58.514 52.632 0.00 0.00 0.00 2.57
3931 4082 4.230603 CGCAGCCACAATCCTCAT 57.769 55.556 0.00 0.00 0.00 2.90
3944 4095 2.549754 CCCTACTTATCCATTTGCGCAG 59.450 50.000 11.31 0.00 0.00 5.18
3945 4096 2.171659 TCCCTACTTATCCATTTGCGCA 59.828 45.455 5.66 5.66 0.00 6.09
3946 4097 2.548480 GTCCCTACTTATCCATTTGCGC 59.452 50.000 0.00 0.00 0.00 6.09
3947 4098 4.058817 GAGTCCCTACTTATCCATTTGCG 58.941 47.826 0.00 0.00 35.56 4.85
3948 4099 5.036117 TGAGTCCCTACTTATCCATTTGC 57.964 43.478 0.00 0.00 35.56 3.68
3949 4100 7.393234 TGTTTTGAGTCCCTACTTATCCATTTG 59.607 37.037 0.00 0.00 35.56 2.32
3950 4101 7.466804 TGTTTTGAGTCCCTACTTATCCATTT 58.533 34.615 0.00 0.00 35.56 2.32
3951 4102 7.027874 TGTTTTGAGTCCCTACTTATCCATT 57.972 36.000 0.00 0.00 35.56 3.16
3952 4103 6.443849 TCTGTTTTGAGTCCCTACTTATCCAT 59.556 38.462 0.00 0.00 35.56 3.41
3953 4104 5.783360 TCTGTTTTGAGTCCCTACTTATCCA 59.217 40.000 0.00 0.00 35.56 3.41
3954 4105 6.107343 GTCTGTTTTGAGTCCCTACTTATCC 58.893 44.000 0.00 0.00 35.56 2.59
3955 4106 6.590677 GTGTCTGTTTTGAGTCCCTACTTATC 59.409 42.308 0.00 0.00 35.56 1.75
3956 4107 6.042781 TGTGTCTGTTTTGAGTCCCTACTTAT 59.957 38.462 0.00 0.00 35.56 1.73
3957 4108 5.364446 TGTGTCTGTTTTGAGTCCCTACTTA 59.636 40.000 0.00 0.00 35.56 2.24
3958 4109 4.163458 TGTGTCTGTTTTGAGTCCCTACTT 59.837 41.667 0.00 0.00 35.56 2.24
3959 4110 3.709653 TGTGTCTGTTTTGAGTCCCTACT 59.290 43.478 0.00 0.00 39.21 2.57
3960 4111 3.808174 GTGTGTCTGTTTTGAGTCCCTAC 59.192 47.826 0.00 0.00 0.00 3.18
3961 4112 3.181458 GGTGTGTCTGTTTTGAGTCCCTA 60.181 47.826 0.00 0.00 0.00 3.53
3962 4113 2.421529 GGTGTGTCTGTTTTGAGTCCCT 60.422 50.000 0.00 0.00 0.00 4.20
3963 4114 1.947456 GGTGTGTCTGTTTTGAGTCCC 59.053 52.381 0.00 0.00 0.00 4.46
3964 4115 1.947456 GGGTGTGTCTGTTTTGAGTCC 59.053 52.381 0.00 0.00 0.00 3.85
3965 4116 1.597663 CGGGTGTGTCTGTTTTGAGTC 59.402 52.381 0.00 0.00 0.00 3.36
3966 4117 1.663695 CGGGTGTGTCTGTTTTGAGT 58.336 50.000 0.00 0.00 0.00 3.41
3967 4118 0.944386 CCGGGTGTGTCTGTTTTGAG 59.056 55.000 0.00 0.00 0.00 3.02
3968 4119 0.253610 ACCGGGTGTGTCTGTTTTGA 59.746 50.000 6.32 0.00 0.00 2.69
3969 4120 0.661020 GACCGGGTGTGTCTGTTTTG 59.339 55.000 3.30 0.00 0.00 2.44
3970 4121 0.253610 TGACCGGGTGTGTCTGTTTT 59.746 50.000 3.30 0.00 33.83 2.43
3971 4122 0.463116 GTGACCGGGTGTGTCTGTTT 60.463 55.000 3.30 0.00 33.83 2.83
3972 4123 1.145377 GTGACCGGGTGTGTCTGTT 59.855 57.895 3.30 0.00 33.83 3.16
3973 4124 0.468585 TAGTGACCGGGTGTGTCTGT 60.469 55.000 3.30 0.00 33.83 3.41
3974 4125 0.677288 TTAGTGACCGGGTGTGTCTG 59.323 55.000 3.30 0.00 33.83 3.51
3975 4126 0.677842 GTTAGTGACCGGGTGTGTCT 59.322 55.000 3.30 0.00 33.83 3.41
3976 4127 0.320160 GGTTAGTGACCGGGTGTGTC 60.320 60.000 3.30 0.00 39.00 3.67
3977 4128 1.750297 GGTTAGTGACCGGGTGTGT 59.250 57.895 3.30 0.00 39.00 3.72
3978 4129 4.687464 GGTTAGTGACCGGGTGTG 57.313 61.111 3.30 0.00 39.00 3.82
3986 4137 2.793933 GCGGACGTATCTGGTTAGTGAC 60.794 54.545 0.00 0.00 0.00 3.67
3987 4138 1.402968 GCGGACGTATCTGGTTAGTGA 59.597 52.381 0.00 0.00 0.00 3.41
3988 4139 1.133598 TGCGGACGTATCTGGTTAGTG 59.866 52.381 0.00 0.00 0.00 2.74
3989 4140 1.404391 CTGCGGACGTATCTGGTTAGT 59.596 52.381 0.00 0.00 0.00 2.24
3990 4141 1.674441 TCTGCGGACGTATCTGGTTAG 59.326 52.381 0.00 0.00 0.00 2.34
3991 4142 1.402968 GTCTGCGGACGTATCTGGTTA 59.597 52.381 10.53 0.00 32.47 2.85
3992 4143 0.172803 GTCTGCGGACGTATCTGGTT 59.827 55.000 10.53 0.00 32.47 3.67
3993 4144 1.807886 GTCTGCGGACGTATCTGGT 59.192 57.895 10.53 0.00 32.47 4.00
3994 4145 4.711980 GTCTGCGGACGTATCTGG 57.288 61.111 10.53 0.00 32.47 3.86
4002 4153 1.635663 CCCATCAAACGTCTGCGGAC 61.636 60.000 16.12 16.12 43.45 4.79
4003 4154 1.375396 CCCATCAAACGTCTGCGGA 60.375 57.895 0.00 0.00 43.45 5.54
4004 4155 1.635663 GACCCATCAAACGTCTGCGG 61.636 60.000 0.00 0.00 43.45 5.69
4005 4156 1.787847 GACCCATCAAACGTCTGCG 59.212 57.895 0.00 0.00 44.93 5.18
4006 4157 0.669318 TCGACCCATCAAACGTCTGC 60.669 55.000 0.00 0.00 0.00 4.26
4007 4158 1.790755 TTCGACCCATCAAACGTCTG 58.209 50.000 0.00 0.00 0.00 3.51
4008 4159 2.762535 ATTCGACCCATCAAACGTCT 57.237 45.000 0.00 0.00 0.00 4.18
4009 4160 4.178540 TCTAATTCGACCCATCAAACGTC 58.821 43.478 0.00 0.00 0.00 4.34
4010 4161 4.181578 CTCTAATTCGACCCATCAAACGT 58.818 43.478 0.00 0.00 0.00 3.99
4011 4162 3.555956 CCTCTAATTCGACCCATCAAACG 59.444 47.826 0.00 0.00 0.00 3.60
4012 4163 4.514401 ACCTCTAATTCGACCCATCAAAC 58.486 43.478 0.00 0.00 0.00 2.93
4013 4164 4.837093 ACCTCTAATTCGACCCATCAAA 57.163 40.909 0.00 0.00 0.00 2.69
4014 4165 4.202080 CGTACCTCTAATTCGACCCATCAA 60.202 45.833 0.00 0.00 0.00 2.57
4015 4166 3.317149 CGTACCTCTAATTCGACCCATCA 59.683 47.826 0.00 0.00 0.00 3.07
4016 4167 3.317430 ACGTACCTCTAATTCGACCCATC 59.683 47.826 0.00 0.00 0.00 3.51
4017 4168 3.294214 ACGTACCTCTAATTCGACCCAT 58.706 45.455 0.00 0.00 0.00 4.00
4018 4169 2.726821 ACGTACCTCTAATTCGACCCA 58.273 47.619 0.00 0.00 0.00 4.51
4019 4170 4.759183 AGATACGTACCTCTAATTCGACCC 59.241 45.833 0.00 0.00 0.00 4.46
4020 4171 5.238214 ACAGATACGTACCTCTAATTCGACC 59.762 44.000 0.00 0.00 0.00 4.79
4021 4172 6.297694 ACAGATACGTACCTCTAATTCGAC 57.702 41.667 0.00 0.00 0.00 4.20
4022 4173 7.436933 TCTACAGATACGTACCTCTAATTCGA 58.563 38.462 0.00 0.00 0.00 3.71
4023 4174 7.649370 TCTACAGATACGTACCTCTAATTCG 57.351 40.000 0.00 0.00 0.00 3.34
4024 4175 7.964011 GCATCTACAGATACGTACCTCTAATTC 59.036 40.741 0.00 0.00 32.63 2.17
4025 4176 7.666388 AGCATCTACAGATACGTACCTCTAATT 59.334 37.037 0.00 0.00 32.63 1.40
4026 4177 7.169591 AGCATCTACAGATACGTACCTCTAAT 58.830 38.462 0.00 0.00 32.63 1.73
4027 4178 6.531923 AGCATCTACAGATACGTACCTCTAA 58.468 40.000 0.00 0.00 32.63 2.10
4028 4179 6.111669 AGCATCTACAGATACGTACCTCTA 57.888 41.667 0.00 0.00 32.63 2.43
4029 4180 4.975631 AGCATCTACAGATACGTACCTCT 58.024 43.478 0.00 0.00 32.63 3.69
4030 4181 5.285798 GAGCATCTACAGATACGTACCTC 57.714 47.826 0.00 0.00 32.63 3.85
4041 4192 6.487905 TGCCCAAGCTTAGAGCATCTACAG 62.488 50.000 11.88 0.00 45.56 2.74
4042 4193 4.703506 TGCCCAAGCTTAGAGCATCTACA 61.704 47.826 11.88 0.00 45.56 2.74
4043 4194 2.158900 TGCCCAAGCTTAGAGCATCTAC 60.159 50.000 11.88 0.00 45.56 2.59
4044 4195 2.118679 TGCCCAAGCTTAGAGCATCTA 58.881 47.619 11.88 0.00 45.56 1.98
4045 4196 0.914644 TGCCCAAGCTTAGAGCATCT 59.085 50.000 11.88 0.00 45.56 2.90
4046 4197 1.978454 ATGCCCAAGCTTAGAGCATC 58.022 50.000 19.04 0.00 45.56 3.91
4047 4198 3.582998 TTATGCCCAAGCTTAGAGCAT 57.417 42.857 24.69 24.69 45.56 3.79
4048 4199 3.364460 TTTATGCCCAAGCTTAGAGCA 57.636 42.857 16.66 16.66 45.56 4.26
4049 4200 4.261783 GGATTTTATGCCCAAGCTTAGAGC 60.262 45.833 0.00 2.86 42.84 4.09
4050 4201 4.889409 TGGATTTTATGCCCAAGCTTAGAG 59.111 41.667 0.00 0.00 40.80 2.43
4051 4202 4.865905 TGGATTTTATGCCCAAGCTTAGA 58.134 39.130 0.00 0.00 40.80 2.10
4052 4203 5.596836 TTGGATTTTATGCCCAAGCTTAG 57.403 39.130 0.00 0.00 40.80 2.18
4053 4204 5.719085 TCTTTGGATTTTATGCCCAAGCTTA 59.281 36.000 0.00 0.00 40.59 3.09
4054 4205 4.531732 TCTTTGGATTTTATGCCCAAGCTT 59.468 37.500 0.00 0.00 40.59 3.74
4055 4206 4.095946 TCTTTGGATTTTATGCCCAAGCT 58.904 39.130 0.00 0.00 40.59 3.74
4056 4207 4.470334 TCTTTGGATTTTATGCCCAAGC 57.530 40.909 0.00 0.00 40.59 4.01
4057 4208 6.224665 TGATCTTTGGATTTTATGCCCAAG 57.775 37.500 0.00 0.00 40.59 3.61
4058 4209 6.617782 TTGATCTTTGGATTTTATGCCCAA 57.382 33.333 0.00 0.00 38.10 4.12
4059 4210 6.213195 ACTTTGATCTTTGGATTTTATGCCCA 59.787 34.615 0.00 0.00 31.46 5.36
4060 4211 6.643388 ACTTTGATCTTTGGATTTTATGCCC 58.357 36.000 0.00 0.00 31.46 5.36
4063 4214 9.709495 TTTGGACTTTGATCTTTGGATTTTATG 57.291 29.630 0.00 0.00 31.46 1.90
4070 4221 5.392995 TGGATTTGGACTTTGATCTTTGGA 58.607 37.500 0.00 0.00 0.00 3.53
4078 4229 5.414454 CGGTCTTTATGGATTTGGACTTTGA 59.586 40.000 0.00 0.00 0.00 2.69
4083 4234 4.941873 AGTTCGGTCTTTATGGATTTGGAC 59.058 41.667 0.00 0.00 0.00 4.02
4087 4238 9.855021 CAATTTTAGTTCGGTCTTTATGGATTT 57.145 29.630 0.00 0.00 0.00 2.17
4102 4253 9.974980 TTCCAGTTTGATAACCAATTTTAGTTC 57.025 29.630 0.00 0.00 34.71 3.01
4136 4288 7.614192 GGGAAGAAGACTAATCCAACCAAATAA 59.386 37.037 0.00 0.00 33.48 1.40
4139 4291 5.074515 AGGGAAGAAGACTAATCCAACCAAA 59.925 40.000 0.00 0.00 33.48 3.28
4170 4324 3.119955 TGCGATCTATCTCGGTTATTCGG 60.120 47.826 0.00 0.00 39.05 4.30
4185 4339 7.653713 AGATAAAGAATTGTACGAATGCGATCT 59.346 33.333 0.00 0.00 41.64 2.75
4187 4341 7.715265 AGATAAAGAATTGTACGAATGCGAT 57.285 32.000 0.00 0.00 41.64 4.58
4208 4362 3.565482 CGCCACTTATGCCACAAATAGAT 59.435 43.478 0.00 0.00 0.00 1.98
4212 4366 0.173255 GCGCCACTTATGCCACAAAT 59.827 50.000 0.00 0.00 0.00 2.32
4227 4381 4.796495 AAGACCGGGGATTGCGCC 62.796 66.667 6.32 0.00 43.33 6.53
4230 4384 1.153147 GGAGAAGACCGGGGATTGC 60.153 63.158 6.32 0.00 0.00 3.56
4281 4440 8.260114 AGATGTTCAGACAACATGTGTATATCA 58.740 33.333 0.00 0.00 41.96 2.15
4297 4456 4.036734 GCAACCAAAAGTCAGATGTTCAGA 59.963 41.667 0.00 0.00 0.00 3.27
4307 4466 3.317711 CAGGTGTATGCAACCAAAAGTCA 59.682 43.478 8.72 0.00 31.21 3.41
4329 4488 7.012421 GGAATTCAGACAACAGATATGGGTAAC 59.988 40.741 7.93 0.00 0.00 2.50
4334 4493 4.024556 GCGGAATTCAGACAACAGATATGG 60.025 45.833 9.97 0.00 0.00 2.74
4349 4508 3.313526 AGTGATGCATGTAAGCGGAATTC 59.686 43.478 2.46 0.00 37.31 2.17
4355 4514 7.818493 ATTATAGTAGTGATGCATGTAAGCG 57.182 36.000 2.46 0.00 37.31 4.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.