Multiple sequence alignment - TraesCS7D01G459600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G459600 chr7D 100.000 8849 0 0 1 8849 576733788 576742636 0.000000e+00 16342.0
1 TraesCS7D01G459600 chr7D 74.893 1629 364 33 6737 8336 2449219 2450831 0.000000e+00 701.0
2 TraesCS7D01G459600 chr7D 81.200 883 151 11 1169 2039 576656403 576657282 0.000000e+00 697.0
3 TraesCS7D01G459600 chr7D 96.479 142 3 1 8368 8509 576737298 576737437 5.340000e-57 233.0
4 TraesCS7D01G459600 chr7D 96.479 142 3 1 3511 3650 576742155 576742296 5.340000e-57 233.0
5 TraesCS7D01G459600 chr7D 75.515 437 93 13 1468 1897 576853166 576853595 1.510000e-47 202.0
6 TraesCS7D01G459600 chr7D 92.708 96 7 0 427 522 576701643 576701548 1.200000e-28 139.0
7 TraesCS7D01G459600 chr7D 92.708 96 7 0 427 522 576704678 576704583 1.200000e-28 139.0
8 TraesCS7D01G459600 chr7D 73.514 370 73 21 2447 2804 3359739 3359383 5.610000e-22 117.0
9 TraesCS7D01G459600 chr1A 95.077 3819 143 12 4704 8506 532725758 532729547 0.000000e+00 5969.0
10 TraesCS7D01G459600 chr1A 94.435 1204 54 6 3511 4702 532715824 532717026 0.000000e+00 1840.0
11 TraesCS7D01G459600 chr1A 95.155 805 30 3 2717 3513 47807699 47808502 0.000000e+00 1262.0
12 TraesCS7D01G459600 chr1A 79.128 1629 308 21 6714 8320 45773959 45775577 0.000000e+00 1096.0
13 TraesCS7D01G459600 chr1A 95.224 335 16 0 8512 8846 47808497 47808831 1.690000e-146 531.0
14 TraesCS7D01G459600 chr1A 96.311 244 4 5 2441 2681 47807459 47807700 6.440000e-106 396.0
15 TraesCS7D01G459600 chr1A 94.286 140 8 0 8367 8506 532715823 532715962 1.930000e-51 215.0
16 TraesCS7D01G459600 chr1A 94.444 126 3 4 2441 2563 47807193 47807317 3.260000e-44 191.0
17 TraesCS7D01G459600 chr5A 86.244 2806 344 27 3592 6372 21011376 21014164 0.000000e+00 3005.0
18 TraesCS7D01G459600 chr5A 80.463 1643 294 21 6699 8320 21023110 21024746 0.000000e+00 1230.0
19 TraesCS7D01G459600 chr5A 97.959 49 1 0 671 719 104975739 104975787 1.580000e-12 86.1
20 TraesCS7D01G459600 chr5A 95.455 44 1 1 1 44 677746148 677746190 1.590000e-07 69.4
21 TraesCS7D01G459600 chr3B 93.984 1762 96 6 4600 6359 739827309 739825556 0.000000e+00 2658.0
22 TraesCS7D01G459600 chr3B 79.282 2785 511 48 3532 6277 27175869 27173112 0.000000e+00 1886.0
23 TraesCS7D01G459600 chr3B 92.041 1181 74 3 7342 8509 739717072 739715899 0.000000e+00 1642.0
24 TraesCS7D01G459600 chr3B 92.723 962 58 4 3512 4461 739828262 739827301 0.000000e+00 1378.0
25 TraesCS7D01G459600 chr3B 79.351 1695 311 23 6671 8340 11222978 11224658 0.000000e+00 1155.0
26 TraesCS7D01G459600 chr3B 89.877 731 74 0 6615 7345 739750677 739749947 0.000000e+00 941.0
27 TraesCS7D01G459600 chr3B 78.682 1229 244 16 4605 5824 753573849 753575068 0.000000e+00 802.0
28 TraesCS7D01G459600 chr3B 85.115 262 35 3 6355 6613 739793183 739792923 1.890000e-66 265.0
29 TraesCS7D01G459600 chr3B 92.414 145 11 0 8365 8509 739828266 739828122 3.240000e-49 207.0
30 TraesCS7D01G459600 chr3B 74.827 433 107 2 5880 6311 753575090 753575521 2.520000e-45 195.0
31 TraesCS7D01G459600 chr3B 90.345 145 12 1 3511 3653 739716040 739715896 1.170000e-43 189.0
32 TraesCS7D01G459600 chr7B 91.477 1666 113 9 679 2322 639383554 639381896 0.000000e+00 2263.0
33 TraesCS7D01G459600 chr7B 90.605 628 49 5 36 658 639384168 639383546 0.000000e+00 824.0
34 TraesCS7D01G459600 chr7B 80.365 932 164 12 996 1910 639277920 639278849 0.000000e+00 689.0
35 TraesCS7D01G459600 chr7B 78.443 334 62 7 1464 1792 641096247 641095919 9.000000e-50 209.0
36 TraesCS7D01G459600 chr7B 90.000 50 5 0 3 52 384099279 384099230 2.060000e-06 65.8
37 TraesCS7D01G459600 chr6A 84.045 1943 271 19 3592 5509 99795780 99797708 0.000000e+00 1834.0
38 TraesCS7D01G459600 chr6A 83.474 1664 243 25 6708 8349 99817284 99818937 0.000000e+00 1520.0
39 TraesCS7D01G459600 chr6A 81.660 976 153 15 3532 4492 415805 414841 0.000000e+00 787.0
40 TraesCS7D01G459600 chr1B 78.752 2805 545 36 3537 6313 524550945 524548164 0.000000e+00 1831.0
41 TraesCS7D01G459600 chr1B 78.402 2065 404 30 4258 6302 570830682 570828640 0.000000e+00 1304.0
42 TraesCS7D01G459600 chr1B 79.082 1874 342 38 6671 8510 524547842 524545985 0.000000e+00 1243.0
43 TraesCS7D01G459600 chr1B 100.000 30 0 0 8276 8305 31686716 31686687 1.000000e-03 56.5
44 TraesCS7D01G459600 chr5D 78.744 2818 518 54 3532 6302 448534338 448537121 0.000000e+00 1810.0
45 TraesCS7D01G459600 chr5D 95.455 44 1 1 1 44 1790805 1790847 1.590000e-07 69.4
46 TraesCS7D01G459600 chr7A 88.086 1536 151 14 3592 5116 37324777 37323263 0.000000e+00 1794.0
47 TraesCS7D01G459600 chr7A 81.301 2214 360 38 4202 6382 620379705 620377513 0.000000e+00 1746.0
48 TraesCS7D01G459600 chr7A 92.467 1062 79 1 965 2025 668524237 668525298 0.000000e+00 1517.0
49 TraesCS7D01G459600 chr7A 83.168 1616 239 27 6747 8340 620377163 620375559 0.000000e+00 1447.0
50 TraesCS7D01G459600 chr7A 80.269 1561 286 12 6810 8353 726724085 726722530 0.000000e+00 1157.0
51 TraesCS7D01G459600 chr7A 82.292 1265 211 10 5114 6372 37321502 37320245 0.000000e+00 1083.0
52 TraesCS7D01G459600 chr7A 78.009 1587 310 28 6798 8360 692221477 692219906 0.000000e+00 961.0
53 TraesCS7D01G459600 chr7A 80.222 1082 179 22 999 2050 668734288 668733212 0.000000e+00 780.0
54 TraesCS7D01G459600 chr7A 85.646 418 57 3 1632 2047 668059901 668060317 3.790000e-118 436.0
55 TraesCS7D01G459600 chr7A 87.640 356 32 6 173 526 668523649 668523994 3.850000e-108 403.0
56 TraesCS7D01G459600 chr7A 88.571 140 16 0 532 671 668524041 668524180 4.250000e-38 171.0
57 TraesCS7D01G459600 chr3A 93.008 1087 61 9 2436 3511 66404554 66403472 0.000000e+00 1572.0
58 TraesCS7D01G459600 chr3A 93.235 340 22 1 8510 8849 66403476 66403138 4.770000e-137 499.0
59 TraesCS7D01G459600 chr6B 92.086 1074 77 6 2445 3511 77729475 77730547 0.000000e+00 1506.0
60 TraesCS7D01G459600 chr6B 92.789 943 68 0 2569 3511 96629702 96628760 0.000000e+00 1365.0
61 TraesCS7D01G459600 chr6B 95.000 340 17 0 8510 8849 96628764 96628425 1.310000e-147 534.0
62 TraesCS7D01G459600 chr6B 94.706 340 18 0 8510 8849 77730543 77730882 6.080000e-146 529.0
63 TraesCS7D01G459600 chr6B 95.652 92 2 2 2444 2533 96630052 96629961 7.160000e-31 147.0
64 TraesCS7D01G459600 chrUn 76.777 2786 529 80 3576 6311 62942552 62945269 0.000000e+00 1452.0
65 TraesCS7D01G459600 chr2D 76.192 2663 551 63 3693 6313 636139152 636136531 0.000000e+00 1328.0
66 TraesCS7D01G459600 chr2D 74.697 1652 387 17 6743 8375 584870281 584868642 0.000000e+00 706.0
67 TraesCS7D01G459600 chr2D 74.538 758 159 30 2443 3183 19904846 19905586 5.190000e-77 300.0
68 TraesCS7D01G459600 chr4A 87.103 1070 125 10 2446 3511 608144220 608143160 0.000000e+00 1199.0
69 TraesCS7D01G459600 chr4A 93.271 535 36 0 2977 3511 540018508 540017974 0.000000e+00 789.0
70 TraesCS7D01G459600 chr4A 92.279 531 29 5 2448 2976 540053738 540053218 0.000000e+00 743.0
71 TraesCS7D01G459600 chr4A 95.549 337 15 0 8513 8849 540017975 540017639 2.810000e-149 540.0
72 TraesCS7D01G459600 chr4A 97.500 40 1 0 1 40 614260527 614260566 1.590000e-07 69.4
73 TraesCS7D01G459600 chr4D 75.312 2568 514 86 3697 6211 434539520 434537020 0.000000e+00 1120.0
74 TraesCS7D01G459600 chr1D 77.500 1640 330 26 4683 6311 201497224 201498835 0.000000e+00 948.0
75 TraesCS7D01G459600 chr1D 95.000 40 2 0 1 40 72883380 72883419 7.420000e-06 63.9
76 TraesCS7D01G459600 chr1D 93.182 44 1 2 1 44 390668733 390668774 7.420000e-06 63.9
77 TraesCS7D01G459600 chr2A 76.312 1600 338 34 6801 8374 515471356 515472940 0.000000e+00 817.0
78 TraesCS7D01G459600 chr2A 79.835 967 175 12 7369 8320 637701446 637700485 0.000000e+00 688.0
79 TraesCS7D01G459600 chr2A 95.122 41 2 0 7275 7315 71634206 71634246 2.060000e-06 65.8
80 TraesCS7D01G459600 chr2A 93.182 44 2 1 1 44 75929239 75929281 7.420000e-06 63.9
81 TraesCS7D01G459600 chr2B 84.861 251 31 5 670 919 740797684 740797928 6.860000e-61 246.0
82 TraesCS7D01G459600 chr2B 91.489 47 4 0 1 47 748490286 748490240 2.060000e-06 65.8
83 TraesCS7D01G459600 chr3D 95.122 41 2 0 1 41 275776912 275776872 2.060000e-06 65.8
84 TraesCS7D01G459600 chr6D 92.105 38 3 0 7278 7315 26573290 26573253 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G459600 chr7D 576733788 576742636 8848 False 16342.000000 16342 100.000000 1 8849 1 chr7D.!!$F3 8848
1 TraesCS7D01G459600 chr7D 2449219 2450831 1612 False 701.000000 701 74.893000 6737 8336 1 chr7D.!!$F1 1599
2 TraesCS7D01G459600 chr7D 576656403 576657282 879 False 697.000000 697 81.200000 1169 2039 1 chr7D.!!$F2 870
3 TraesCS7D01G459600 chr1A 532725758 532729547 3789 False 5969.000000 5969 95.077000 4704 8506 1 chr1A.!!$F2 3802
4 TraesCS7D01G459600 chr1A 45773959 45775577 1618 False 1096.000000 1096 79.128000 6714 8320 1 chr1A.!!$F1 1606
5 TraesCS7D01G459600 chr1A 532715823 532717026 1203 False 1027.500000 1840 94.360500 3511 8506 2 chr1A.!!$F4 4995
6 TraesCS7D01G459600 chr1A 47807193 47808831 1638 False 595.000000 1262 95.283500 2441 8846 4 chr1A.!!$F3 6405
7 TraesCS7D01G459600 chr5A 21011376 21014164 2788 False 3005.000000 3005 86.244000 3592 6372 1 chr5A.!!$F1 2780
8 TraesCS7D01G459600 chr5A 21023110 21024746 1636 False 1230.000000 1230 80.463000 6699 8320 1 chr5A.!!$F2 1621
9 TraesCS7D01G459600 chr3B 27173112 27175869 2757 True 1886.000000 1886 79.282000 3532 6277 1 chr3B.!!$R1 2745
10 TraesCS7D01G459600 chr3B 739825556 739828266 2710 True 1414.333333 2658 93.040333 3512 8509 3 chr3B.!!$R5 4997
11 TraesCS7D01G459600 chr3B 11222978 11224658 1680 False 1155.000000 1155 79.351000 6671 8340 1 chr3B.!!$F1 1669
12 TraesCS7D01G459600 chr3B 739749947 739750677 730 True 941.000000 941 89.877000 6615 7345 1 chr3B.!!$R2 730
13 TraesCS7D01G459600 chr3B 739715896 739717072 1176 True 915.500000 1642 91.193000 3511 8509 2 chr3B.!!$R4 4998
14 TraesCS7D01G459600 chr3B 753573849 753575521 1672 False 498.500000 802 76.754500 4605 6311 2 chr3B.!!$F2 1706
15 TraesCS7D01G459600 chr7B 639381896 639384168 2272 True 1543.500000 2263 91.041000 36 2322 2 chr7B.!!$R3 2286
16 TraesCS7D01G459600 chr7B 639277920 639278849 929 False 689.000000 689 80.365000 996 1910 1 chr7B.!!$F1 914
17 TraesCS7D01G459600 chr6A 99795780 99797708 1928 False 1834.000000 1834 84.045000 3592 5509 1 chr6A.!!$F1 1917
18 TraesCS7D01G459600 chr6A 99817284 99818937 1653 False 1520.000000 1520 83.474000 6708 8349 1 chr6A.!!$F2 1641
19 TraesCS7D01G459600 chr6A 414841 415805 964 True 787.000000 787 81.660000 3532 4492 1 chr6A.!!$R1 960
20 TraesCS7D01G459600 chr1B 524545985 524550945 4960 True 1537.000000 1831 78.917000 3537 8510 2 chr1B.!!$R3 4973
21 TraesCS7D01G459600 chr1B 570828640 570830682 2042 True 1304.000000 1304 78.402000 4258 6302 1 chr1B.!!$R2 2044
22 TraesCS7D01G459600 chr5D 448534338 448537121 2783 False 1810.000000 1810 78.744000 3532 6302 1 chr5D.!!$F2 2770
23 TraesCS7D01G459600 chr7A 620375559 620379705 4146 True 1596.500000 1746 82.234500 4202 8340 2 chr7A.!!$R5 4138
24 TraesCS7D01G459600 chr7A 37320245 37324777 4532 True 1438.500000 1794 85.189000 3592 6372 2 chr7A.!!$R4 2780
25 TraesCS7D01G459600 chr7A 726722530 726724085 1555 True 1157.000000 1157 80.269000 6810 8353 1 chr7A.!!$R3 1543
26 TraesCS7D01G459600 chr7A 692219906 692221477 1571 True 961.000000 961 78.009000 6798 8360 1 chr7A.!!$R2 1562
27 TraesCS7D01G459600 chr7A 668733212 668734288 1076 True 780.000000 780 80.222000 999 2050 1 chr7A.!!$R1 1051
28 TraesCS7D01G459600 chr7A 668523649 668525298 1649 False 697.000000 1517 89.559333 173 2025 3 chr7A.!!$F2 1852
29 TraesCS7D01G459600 chr3A 66403138 66404554 1416 True 1035.500000 1572 93.121500 2436 8849 2 chr3A.!!$R1 6413
30 TraesCS7D01G459600 chr6B 77729475 77730882 1407 False 1017.500000 1506 93.396000 2445 8849 2 chr6B.!!$F1 6404
31 TraesCS7D01G459600 chr6B 96628425 96630052 1627 True 682.000000 1365 94.480333 2444 8849 3 chr6B.!!$R1 6405
32 TraesCS7D01G459600 chrUn 62942552 62945269 2717 False 1452.000000 1452 76.777000 3576 6311 1 chrUn.!!$F1 2735
33 TraesCS7D01G459600 chr2D 636136531 636139152 2621 True 1328.000000 1328 76.192000 3693 6313 1 chr2D.!!$R2 2620
34 TraesCS7D01G459600 chr2D 584868642 584870281 1639 True 706.000000 706 74.697000 6743 8375 1 chr2D.!!$R1 1632
35 TraesCS7D01G459600 chr2D 19904846 19905586 740 False 300.000000 300 74.538000 2443 3183 1 chr2D.!!$F1 740
36 TraesCS7D01G459600 chr4A 608143160 608144220 1060 True 1199.000000 1199 87.103000 2446 3511 1 chr4A.!!$R2 1065
37 TraesCS7D01G459600 chr4A 540053218 540053738 520 True 743.000000 743 92.279000 2448 2976 1 chr4A.!!$R1 528
38 TraesCS7D01G459600 chr4A 540017639 540018508 869 True 664.500000 789 94.410000 2977 8849 2 chr4A.!!$R3 5872
39 TraesCS7D01G459600 chr4D 434537020 434539520 2500 True 1120.000000 1120 75.312000 3697 6211 1 chr4D.!!$R1 2514
40 TraesCS7D01G459600 chr1D 201497224 201498835 1611 False 948.000000 948 77.500000 4683 6311 1 chr1D.!!$F2 1628
41 TraesCS7D01G459600 chr2A 515471356 515472940 1584 False 817.000000 817 76.312000 6801 8374 1 chr2A.!!$F3 1573
42 TraesCS7D01G459600 chr2A 637700485 637701446 961 True 688.000000 688 79.835000 7369 8320 1 chr2A.!!$R1 951

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
351 354 0.042881 GGTACCACCTCCCTCCTCTT 59.957 60.0 7.15 0.00 34.73 2.85 F
1409 1484 0.249031 TGCGCGATCATGGTACTCAG 60.249 55.0 12.10 0.00 0.00 3.35 F
2348 2445 0.179097 GGATCCAGCAAGTCTCGTCC 60.179 60.0 6.95 0.00 0.00 4.79 F
2378 2475 0.108186 CGCTGCCAGATCTGTGGTAA 60.108 55.0 21.11 1.50 40.09 2.85 F
2386 2483 0.179081 GATCTGTGGTAAGTCCGGGC 60.179 60.0 0.00 0.00 39.52 6.13 F
3514 3907 0.249398 GTGGCTCCATCCGTAGTGTT 59.751 55.0 0.00 0.00 0.00 3.32 F
4628 5078 0.326595 TTCTTCAACATGGCGGCCTA 59.673 50.0 21.46 7.11 0.00 3.93 F
4645 5095 0.387202 CTACTGCTGATCCCTGGACG 59.613 60.0 0.00 0.00 0.00 4.79 F
6512 6984 0.256752 TCTTCCCATGGCATCCACTG 59.743 55.0 6.09 0.00 35.80 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2329 2426 0.179097 GGACGAGACTTGCTGGATCC 60.179 60.000 4.20 4.20 0.00 3.36 R
2359 2456 0.108186 TTACCACAGATCTGGCAGCG 60.108 55.000 26.08 10.70 34.20 5.18 R
4157 4570 0.033504 GACAGAAGACGCCAACAGGA 59.966 55.000 0.00 0.00 0.00 3.86 R
4331 4753 1.592131 CTCCTCGAGCTGCAGCATC 60.592 63.158 38.24 28.56 45.16 3.91 R
4378 4801 3.112709 GCGGTGTGGAAGAGACGC 61.113 66.667 0.00 0.00 40.19 5.19 R
5030 5483 0.176910 TGCGAAGATGCACCGGAATA 59.823 50.000 9.46 0.00 40.62 1.75 R
5955 6409 0.247185 CCAAAAATGAGGCGGCATGT 59.753 50.000 13.08 0.00 0.00 3.21 R
6620 7095 0.328592 TCAGAGTGCGTAGGAGAGGT 59.671 55.000 0.00 0.00 0.00 3.85 R
8174 8656 0.736636 TACGACGATGCTGTACAGGG 59.263 55.000 23.95 1.01 0.00 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 9.831737 AATTGAGTCATCTATTTTGAAACGAAG 57.168 29.630 0.00 0.00 28.12 3.79
34 35 6.831769 TGAGTCATCTATTTTGAAACGAAGC 58.168 36.000 0.00 0.00 0.00 3.86
35 36 5.858475 AGTCATCTATTTTGAAACGAAGCG 58.142 37.500 0.00 0.00 0.00 4.68
36 37 5.637810 AGTCATCTATTTTGAAACGAAGCGA 59.362 36.000 0.00 0.00 0.00 4.93
37 38 5.954349 GTCATCTATTTTGAAACGAAGCGAG 59.046 40.000 0.00 0.00 0.00 5.03
38 39 5.637810 TCATCTATTTTGAAACGAAGCGAGT 59.362 36.000 0.00 0.00 0.00 4.18
39 40 6.809689 TCATCTATTTTGAAACGAAGCGAGTA 59.190 34.615 0.00 0.00 0.00 2.59
169 172 0.877743 TGCCATCAAAATCGTTCGCA 59.122 45.000 0.00 0.00 0.00 5.10
170 173 1.268079 TGCCATCAAAATCGTTCGCAA 59.732 42.857 0.00 0.00 0.00 4.85
223 226 1.032114 GTCCTTTTCCATGCCCCTCG 61.032 60.000 0.00 0.00 0.00 4.63
244 247 2.285144 CCCACTACCCCCGGTCTT 60.285 66.667 0.00 0.00 37.09 3.01
299 302 2.679342 CCATTCCCTTCCTCCCGCA 61.679 63.158 0.00 0.00 0.00 5.69
351 354 0.042881 GGTACCACCTCCCTCCTCTT 59.957 60.000 7.15 0.00 34.73 2.85
412 415 1.592669 CGCCGCTTCCACTGGATAG 60.593 63.158 0.00 1.21 0.00 2.08
413 416 1.227674 GCCGCTTCCACTGGATAGG 60.228 63.158 0.00 4.30 0.00 2.57
414 417 1.686325 GCCGCTTCCACTGGATAGGA 61.686 60.000 14.76 0.00 0.00 2.94
415 418 1.051812 CCGCTTCCACTGGATAGGAT 58.948 55.000 0.00 0.00 33.10 3.24
416 419 2.248248 CCGCTTCCACTGGATAGGATA 58.752 52.381 0.00 0.00 33.10 2.59
478 481 2.824041 CGGAACAGCCCGGATTGG 60.824 66.667 0.73 0.00 45.43 3.16
522 526 2.412323 AACCTATCGACCTCGCGCA 61.412 57.895 8.75 0.00 39.60 6.09
550 595 4.148825 CTAGCCGTTGCCCTCGCT 62.149 66.667 0.00 0.00 38.69 4.93
618 664 2.434843 CCCAGCGGAGGCATCTACA 61.435 63.158 0.00 0.00 43.41 2.74
642 688 4.148825 GCGCGGTGAGTCATCCCT 62.149 66.667 8.83 0.00 0.00 4.20
645 691 1.450312 GCGGTGAGTCATCCCTTGG 60.450 63.158 0.00 0.00 0.00 3.61
650 696 3.011517 AGTCATCCCTTGGCGCCT 61.012 61.111 29.70 1.94 34.17 5.52
651 697 2.514824 GTCATCCCTTGGCGCCTC 60.515 66.667 29.70 1.40 0.00 4.70
652 698 3.797353 TCATCCCTTGGCGCCTCC 61.797 66.667 29.70 0.50 0.00 4.30
653 699 4.113815 CATCCCTTGGCGCCTCCA 62.114 66.667 29.70 10.82 44.85 3.86
654 700 3.099170 ATCCCTTGGCGCCTCCAT 61.099 61.111 29.70 9.50 46.04 3.41
655 701 2.693871 ATCCCTTGGCGCCTCCATT 61.694 57.895 29.70 5.19 46.04 3.16
656 702 1.352622 ATCCCTTGGCGCCTCCATTA 61.353 55.000 29.70 9.25 46.04 1.90
657 703 1.526917 CCCTTGGCGCCTCCATTAG 60.527 63.158 29.70 14.06 46.04 1.73
658 704 1.526887 CCTTGGCGCCTCCATTAGA 59.473 57.895 29.70 0.07 46.04 2.10
659 705 0.815615 CCTTGGCGCCTCCATTAGAC 60.816 60.000 29.70 0.00 46.04 2.59
660 706 1.153449 TTGGCGCCTCCATTAGACG 60.153 57.895 29.70 0.00 46.04 4.18
661 707 2.280186 GGCGCCTCCATTAGACGG 60.280 66.667 22.15 0.00 34.01 4.79
662 708 2.967615 GCGCCTCCATTAGACGGC 60.968 66.667 0.00 0.00 36.18 5.68
663 709 2.280186 CGCCTCCATTAGACGGCC 60.280 66.667 0.00 0.00 36.16 6.13
664 710 2.797278 CGCCTCCATTAGACGGCCT 61.797 63.158 0.00 0.00 36.16 5.19
665 711 1.461091 CGCCTCCATTAGACGGCCTA 61.461 60.000 0.00 0.00 36.16 3.93
666 712 0.756903 GCCTCCATTAGACGGCCTAA 59.243 55.000 0.00 0.00 41.23 2.69
667 713 1.540580 GCCTCCATTAGACGGCCTAAC 60.541 57.143 0.00 0.00 39.93 2.34
668 714 2.040178 CCTCCATTAGACGGCCTAACT 58.960 52.381 0.00 0.00 39.93 2.24
669 715 2.036089 CCTCCATTAGACGGCCTAACTC 59.964 54.545 0.00 0.00 39.93 3.01
670 716 2.959707 CTCCATTAGACGGCCTAACTCT 59.040 50.000 0.00 0.00 39.93 3.24
671 717 3.371965 TCCATTAGACGGCCTAACTCTT 58.628 45.455 0.00 0.00 39.93 2.85
672 718 3.132289 TCCATTAGACGGCCTAACTCTTG 59.868 47.826 0.00 0.00 39.93 3.02
673 719 3.132289 CCATTAGACGGCCTAACTCTTGA 59.868 47.826 0.00 0.00 39.93 3.02
674 720 4.382685 CCATTAGACGGCCTAACTCTTGAA 60.383 45.833 0.00 0.00 39.93 2.69
675 721 2.745515 AGACGGCCTAACTCTTGAAC 57.254 50.000 0.00 0.00 0.00 3.18
676 722 2.249139 AGACGGCCTAACTCTTGAACT 58.751 47.619 0.00 0.00 0.00 3.01
677 723 3.428532 AGACGGCCTAACTCTTGAACTA 58.571 45.455 0.00 0.00 0.00 2.24
721 767 4.999751 GCTTGTATGAACTAGCCTATGC 57.000 45.455 1.26 0.00 45.27 3.14
766 812 9.786105 GTAGTTTTAAGAAGAACTAGATAGCGT 57.214 33.333 0.00 0.00 38.59 5.07
774 825 8.905660 AGAAGAACTAGATAGCGTGAACTATA 57.094 34.615 0.00 0.00 32.95 1.31
811 862 4.920640 TGGAAATTCGGCAAAGTTTACA 57.079 36.364 0.00 0.00 0.00 2.41
812 863 5.263968 TGGAAATTCGGCAAAGTTTACAA 57.736 34.783 0.00 0.00 0.00 2.41
832 883 1.066143 AGATCTGTTTTGCCGATCCGT 60.066 47.619 0.00 0.00 35.34 4.69
857 908 2.727278 CCGTCCCGCAAATTTTGTTTAC 59.273 45.455 10.65 4.18 0.00 2.01
888 939 0.593128 AACGACATTTGCAGGACAGC 59.407 50.000 0.00 0.00 0.00 4.40
890 941 1.291184 CGACATTTGCAGGACAGCGA 61.291 55.000 0.00 0.00 37.31 4.93
904 955 2.747989 GACAGCGATATACGGGATCTGA 59.252 50.000 0.00 0.00 42.83 3.27
960 1011 0.687354 AACGTTCCATCTCCAGCAGT 59.313 50.000 0.00 0.00 0.00 4.40
982 1033 4.624452 GTGAAGAAATTTCAGCTGCAATCC 59.376 41.667 19.99 7.53 0.00 3.01
1148 1199 2.494870 GGTACGAGCTGGAAGTCCTTAA 59.505 50.000 1.44 0.00 35.30 1.85
1188 1263 2.062519 GTGGCTCTGAAACTCGTCTTC 58.937 52.381 0.00 0.00 0.00 2.87
1245 1320 2.044555 CATGGCCTGTCAGCTGGTG 61.045 63.158 15.13 0.00 36.26 4.17
1300 1375 1.566018 CGGCGTGTCAGAAACCTTCC 61.566 60.000 0.00 0.00 0.00 3.46
1305 1380 2.480419 CGTGTCAGAAACCTTCCATCAC 59.520 50.000 0.00 0.00 0.00 3.06
1356 1431 7.453393 TCATGGACAGAAATAAGATACCATCC 58.547 38.462 0.00 0.00 35.16 3.51
1409 1484 0.249031 TGCGCGATCATGGTACTCAG 60.249 55.000 12.10 0.00 0.00 3.35
1413 1488 1.000283 GCGATCATGGTACTCAGGGAG 60.000 57.143 0.00 0.00 35.52 4.30
1447 1522 1.681166 CCATCCCAGCTGAAGAAGTGG 60.681 57.143 17.39 12.78 0.00 4.00
1452 1527 0.601046 CAGCTGAAGAAGTGGTCGCA 60.601 55.000 8.42 0.00 0.00 5.10
1454 1529 1.569479 GCTGAAGAAGTGGTCGCACC 61.569 60.000 0.00 0.00 39.22 5.01
1521 1596 0.689080 AGATGGGAGCCGATGTCACT 60.689 55.000 0.00 0.00 0.00 3.41
1529 1604 1.537202 AGCCGATGTCACTTTTCTTGC 59.463 47.619 0.00 0.00 0.00 4.01
1595 1670 2.281900 TCCGGTTTTCAAGGCCCG 60.282 61.111 0.00 0.00 40.12 6.13
1617 1694 3.254892 GTTCTTCGGAGACATGAAGGAC 58.745 50.000 0.00 0.36 41.94 3.85
1626 1703 2.369860 AGACATGAAGGACAAGTGCTCA 59.630 45.455 0.00 0.00 30.32 4.26
1655 1732 1.202746 GGAGATCAAGGACATGGAGGC 60.203 57.143 0.00 0.00 0.00 4.70
1707 1784 1.004560 CACTGACACGGTGCCTGAT 60.005 57.895 8.30 0.00 33.85 2.90
1713 1790 0.320771 ACACGGTGCCTGATCTTGAC 60.321 55.000 8.30 0.00 0.00 3.18
1776 1853 1.893808 GGCCGCTGACATGTATGGG 60.894 63.158 0.00 2.92 0.00 4.00
1834 1911 2.094659 GGTGGCATCACTGTCGACG 61.095 63.158 11.62 8.41 43.17 5.12
1897 1974 1.888512 TGAAGCTCAAGGCCAAATGTC 59.111 47.619 5.01 0.00 43.05 3.06
1938 2016 2.180131 CTGCTGTTCTTGAGGCGTGC 62.180 60.000 0.00 0.00 0.00 5.34
1969 2047 5.450818 AATGGGTATAAGCACCTTGAAGA 57.549 39.130 0.00 0.00 38.73 2.87
1988 2067 0.540597 AAAGCTGCCCTTTGGTCCTC 60.541 55.000 0.00 0.00 42.07 3.71
1991 2070 1.303643 CTGCCCTTTGGTCCTCACC 60.304 63.158 0.00 0.00 44.10 4.02
2007 2090 2.750166 CTCACCGAGCTTCTCAAGTCTA 59.250 50.000 0.00 0.00 0.00 2.59
2008 2091 2.488545 TCACCGAGCTTCTCAAGTCTAC 59.511 50.000 0.00 0.00 0.00 2.59
2085 2182 4.094887 GCATCCATGTGTGGTGTAGTAAAG 59.905 45.833 0.00 0.00 46.16 1.85
2103 2200 7.005062 AGTAAAGCTTATGTCTGCATTTACG 57.995 36.000 0.00 0.00 37.56 3.18
2124 2221 4.801516 ACGTAAAATGGAAAACTTGTGTGC 59.198 37.500 0.00 0.00 0.00 4.57
2125 2222 4.800993 CGTAAAATGGAAAACTTGTGTGCA 59.199 37.500 0.00 0.00 0.00 4.57
2128 2225 4.942761 AATGGAAAACTTGTGTGCATCT 57.057 36.364 0.00 0.00 0.00 2.90
2175 2272 1.167851 CGCTTTCATTGCTCCTCCAA 58.832 50.000 0.00 0.00 0.00 3.53
2181 2278 5.126061 GCTTTCATTGCTCCTCCAATTTAGA 59.874 40.000 0.00 0.00 33.35 2.10
2182 2279 6.183360 GCTTTCATTGCTCCTCCAATTTAGAT 60.183 38.462 0.00 0.00 33.35 1.98
2183 2280 6.704289 TTCATTGCTCCTCCAATTTAGATG 57.296 37.500 0.00 0.00 33.35 2.90
2225 2322 4.634199 CCAAGATTTGGTTGAATGCTTGT 58.366 39.130 0.00 0.00 45.93 3.16
2227 2324 4.525912 AGATTTGGTTGAATGCTTGTCC 57.474 40.909 0.00 0.00 0.00 4.02
2229 2326 4.344679 AGATTTGGTTGAATGCTTGTCCAA 59.655 37.500 0.00 0.00 33.90 3.53
2263 2360 9.956720 CAAGGTGATAAATAAAGTTGGATGATC 57.043 33.333 0.00 0.00 0.00 2.92
2281 2378 5.339008 TGATCCAGAGCGTGTATAGTTTT 57.661 39.130 0.00 0.00 0.00 2.43
2295 2392 7.960195 CGTGTATAGTTTTGTACATGATTTGCA 59.040 33.333 0.00 0.00 39.13 4.08
2300 2397 3.574284 TTGTACATGATTTGCACAGCC 57.426 42.857 0.00 0.00 33.18 4.85
2303 2400 1.213275 CATGATTTGCACAGCCGCA 59.787 52.632 0.00 0.00 41.03 5.69
2322 2419 0.326264 AGCCACACAATCCAGGTCTC 59.674 55.000 0.00 0.00 0.00 3.36
2323 2420 0.678048 GCCACACAATCCAGGTCTCC 60.678 60.000 0.00 0.00 0.00 3.71
2324 2421 0.391661 CCACACAATCCAGGTCTCCG 60.392 60.000 0.00 0.00 0.00 4.63
2325 2422 1.021390 CACACAATCCAGGTCTCCGC 61.021 60.000 0.00 0.00 0.00 5.54
2326 2423 1.811266 CACAATCCAGGTCTCCGCG 60.811 63.158 0.00 0.00 0.00 6.46
2327 2424 2.202932 CAATCCAGGTCTCCGCGG 60.203 66.667 22.12 22.12 0.00 6.46
2328 2425 4.162690 AATCCAGGTCTCCGCGGC 62.163 66.667 23.51 6.46 0.00 6.53
2342 2439 2.892425 CGGCGGATCCAGCAAGTC 60.892 66.667 23.67 4.77 36.08 3.01
2343 2440 2.586792 GGCGGATCCAGCAAGTCT 59.413 61.111 23.67 0.00 36.08 3.24
2344 2441 1.522580 GGCGGATCCAGCAAGTCTC 60.523 63.158 23.67 7.42 36.08 3.36
2345 2442 1.880340 GCGGATCCAGCAAGTCTCG 60.880 63.158 19.44 0.79 34.19 4.04
2346 2443 1.513158 CGGATCCAGCAAGTCTCGT 59.487 57.895 13.41 0.00 0.00 4.18
2347 2444 0.526524 CGGATCCAGCAAGTCTCGTC 60.527 60.000 13.41 0.00 0.00 4.20
2348 2445 0.179097 GGATCCAGCAAGTCTCGTCC 60.179 60.000 6.95 0.00 0.00 4.79
2349 2446 0.526524 GATCCAGCAAGTCTCGTCCG 60.527 60.000 0.00 0.00 0.00 4.79
2350 2447 1.949847 ATCCAGCAAGTCTCGTCCGG 61.950 60.000 0.00 0.00 0.00 5.14
2351 2448 2.636412 CCAGCAAGTCTCGTCCGGA 61.636 63.158 0.00 0.00 0.00 5.14
2352 2449 1.513158 CAGCAAGTCTCGTCCGGAT 59.487 57.895 7.81 0.00 0.00 4.18
2353 2450 0.803768 CAGCAAGTCTCGTCCGGATG 60.804 60.000 18.13 18.13 0.00 3.51
2354 2451 2.167861 GCAAGTCTCGTCCGGATGC 61.168 63.158 19.40 13.44 0.00 3.91
2355 2452 1.519455 CAAGTCTCGTCCGGATGCC 60.519 63.158 19.40 9.04 0.00 4.40
2357 2454 3.823330 GTCTCGTCCGGATGCCGT 61.823 66.667 19.40 0.00 46.80 5.68
2358 2455 3.822192 TCTCGTCCGGATGCCGTG 61.822 66.667 19.40 13.13 46.80 4.94
2371 2468 4.827087 CCGTGCGCTGCCAGATCT 62.827 66.667 9.73 0.00 0.00 2.75
2372 2469 3.561213 CGTGCGCTGCCAGATCTG 61.561 66.667 16.24 16.24 0.00 2.90
2373 2470 2.435586 GTGCGCTGCCAGATCTGT 60.436 61.111 21.11 0.00 0.00 3.41
2374 2471 2.435410 TGCGCTGCCAGATCTGTG 60.435 61.111 21.11 13.38 0.00 3.66
2375 2472 3.200593 GCGCTGCCAGATCTGTGG 61.201 66.667 21.11 9.25 41.01 4.17
2376 2473 2.267006 CGCTGCCAGATCTGTGGT 59.733 61.111 21.11 0.00 40.09 4.16
2377 2474 1.517361 CGCTGCCAGATCTGTGGTA 59.483 57.895 21.11 6.78 40.09 3.25
2378 2475 0.108186 CGCTGCCAGATCTGTGGTAA 60.108 55.000 21.11 1.50 40.09 2.85
2379 2476 1.661341 GCTGCCAGATCTGTGGTAAG 58.339 55.000 21.11 11.36 40.09 2.34
2380 2477 1.065854 GCTGCCAGATCTGTGGTAAGT 60.066 52.381 21.11 0.00 40.09 2.24
2381 2478 2.898705 CTGCCAGATCTGTGGTAAGTC 58.101 52.381 21.11 2.77 40.09 3.01
2382 2479 1.555075 TGCCAGATCTGTGGTAAGTCC 59.445 52.381 21.11 0.19 40.09 3.85
2383 2480 1.471676 GCCAGATCTGTGGTAAGTCCG 60.472 57.143 21.11 3.19 40.09 4.79
2384 2481 1.137086 CCAGATCTGTGGTAAGTCCGG 59.863 57.143 21.11 0.00 39.52 5.14
2385 2482 1.137086 CAGATCTGTGGTAAGTCCGGG 59.863 57.143 14.95 0.00 39.52 5.73
2386 2483 0.179081 GATCTGTGGTAAGTCCGGGC 60.179 60.000 0.00 0.00 39.52 6.13
2387 2484 0.907704 ATCTGTGGTAAGTCCGGGCA 60.908 55.000 9.71 0.00 39.52 5.36
2388 2485 0.907704 TCTGTGGTAAGTCCGGGCAT 60.908 55.000 9.71 0.00 39.52 4.40
2389 2486 0.828022 CTGTGGTAAGTCCGGGCATA 59.172 55.000 9.71 0.00 39.52 3.14
2390 2487 0.538118 TGTGGTAAGTCCGGGCATAC 59.462 55.000 12.95 12.95 39.52 2.39
2391 2488 0.538118 GTGGTAAGTCCGGGCATACA 59.462 55.000 21.78 6.23 39.52 2.29
2392 2489 0.828022 TGGTAAGTCCGGGCATACAG 59.172 55.000 21.78 0.00 39.52 2.74
2393 2490 0.532196 GGTAAGTCCGGGCATACAGC 60.532 60.000 21.78 3.07 44.65 4.40
2409 2506 4.783621 GCACATGCTCCCGGCTCA 62.784 66.667 0.00 0.00 42.39 4.26
2410 2507 2.821366 CACATGCTCCCGGCTCAC 60.821 66.667 0.00 0.00 42.39 3.51
2411 2508 3.321648 ACATGCTCCCGGCTCACA 61.322 61.111 0.00 0.00 42.39 3.58
2412 2509 2.046023 CATGCTCCCGGCTCACAA 60.046 61.111 0.00 0.00 42.39 3.33
2413 2510 1.675310 CATGCTCCCGGCTCACAAA 60.675 57.895 0.00 0.00 42.39 2.83
2414 2511 1.074775 ATGCTCCCGGCTCACAAAA 59.925 52.632 0.00 0.00 42.39 2.44
2415 2512 0.323725 ATGCTCCCGGCTCACAAAAT 60.324 50.000 0.00 0.00 42.39 1.82
2416 2513 0.326595 TGCTCCCGGCTCACAAAATA 59.673 50.000 0.00 0.00 42.39 1.40
2417 2514 1.064758 TGCTCCCGGCTCACAAAATAT 60.065 47.619 0.00 0.00 42.39 1.28
2418 2515 2.024414 GCTCCCGGCTCACAAAATATT 58.976 47.619 0.00 0.00 38.06 1.28
2419 2516 2.427095 GCTCCCGGCTCACAAAATATTT 59.573 45.455 0.00 0.00 38.06 1.40
2420 2517 3.119137 GCTCCCGGCTCACAAAATATTTT 60.119 43.478 7.64 7.64 38.06 1.82
2421 2518 4.620567 GCTCCCGGCTCACAAAATATTTTT 60.621 41.667 10.77 0.97 38.06 1.94
2422 2519 5.066968 TCCCGGCTCACAAAATATTTTTC 57.933 39.130 10.77 0.00 0.00 2.29
2423 2520 4.524714 TCCCGGCTCACAAAATATTTTTCA 59.475 37.500 10.77 0.00 0.00 2.69
2424 2521 5.186797 TCCCGGCTCACAAAATATTTTTCAT 59.813 36.000 10.77 0.00 0.00 2.57
2425 2522 5.519927 CCCGGCTCACAAAATATTTTTCATC 59.480 40.000 10.77 0.67 0.00 2.92
2426 2523 5.519927 CCGGCTCACAAAATATTTTTCATCC 59.480 40.000 10.77 7.94 0.00 3.51
2427 2524 6.332630 CGGCTCACAAAATATTTTTCATCCT 58.667 36.000 10.77 0.00 0.00 3.24
2428 2525 6.813152 CGGCTCACAAAATATTTTTCATCCTT 59.187 34.615 10.77 0.00 0.00 3.36
2429 2526 7.331687 CGGCTCACAAAATATTTTTCATCCTTT 59.668 33.333 10.77 0.00 0.00 3.11
2430 2527 9.651913 GGCTCACAAAATATTTTTCATCCTTTA 57.348 29.630 10.77 0.00 0.00 1.85
2716 3097 0.723414 CAGCTTGTACGCATCCTGTG 59.277 55.000 0.00 0.00 0.00 3.66
2781 3163 2.298446 CCACAGGATAGCGATGATCACT 59.702 50.000 0.00 0.00 0.00 3.41
2807 3189 5.491070 AGATCGGACTTTGTCATTCATCAA 58.509 37.500 0.07 0.00 33.68 2.57
3348 3733 1.532604 CCGCTAGAGTGGTGGTGTGA 61.533 60.000 0.65 0.00 40.69 3.58
3509 3902 3.845259 GCGGTGGCTCCATCCGTA 61.845 66.667 21.77 0.00 40.26 4.02
3510 3903 2.417516 CGGTGGCTCCATCCGTAG 59.582 66.667 16.44 0.00 36.56 3.51
3511 3904 2.423898 CGGTGGCTCCATCCGTAGT 61.424 63.158 16.44 0.00 36.56 2.73
3512 3905 1.144057 GGTGGCTCCATCCGTAGTG 59.856 63.158 0.00 0.00 35.97 2.74
3513 3906 1.614241 GGTGGCTCCATCCGTAGTGT 61.614 60.000 0.00 0.00 35.97 3.55
3514 3907 0.249398 GTGGCTCCATCCGTAGTGTT 59.751 55.000 0.00 0.00 0.00 3.32
3515 3908 1.479323 GTGGCTCCATCCGTAGTGTTA 59.521 52.381 0.00 0.00 0.00 2.41
3582 3977 4.404654 CTGCTTTCGGTTGGGCGC 62.405 66.667 0.00 0.00 0.00 6.53
3603 3999 3.118223 GCTGCCCTCCTATATGTAATCCC 60.118 52.174 0.00 0.00 0.00 3.85
3782 4192 2.242708 CTCCTCCACTACTACCCTCACT 59.757 54.545 0.00 0.00 0.00 3.41
3905 4318 2.413765 GAGATCCACCTCGACCGC 59.586 66.667 0.00 0.00 0.00 5.68
3934 4347 1.078759 CTTCACCACATCTCCGACGC 61.079 60.000 0.00 0.00 0.00 5.19
3941 4354 1.826054 CATCTCCGACGCCTCTCCT 60.826 63.158 0.00 0.00 0.00 3.69
3956 4369 4.473520 CCTCCCGAGCCGCACAAT 62.474 66.667 0.00 0.00 0.00 2.71
3980 4393 1.285578 GCTGGCTCAAAGACGATCTC 58.714 55.000 0.00 0.00 0.00 2.75
3986 4399 2.543861 GCTCAAAGACGATCTCGCCATA 60.544 50.000 0.00 0.00 44.43 2.74
4034 4447 0.600255 CCGAGCTGTTCAACCTCGTT 60.600 55.000 13.18 0.00 45.00 3.85
4046 4459 1.366366 CCTCGTTGTCAAGGACGGT 59.634 57.895 3.85 0.00 39.59 4.83
4052 4465 2.668550 GTCAAGGACGGTGCCACC 60.669 66.667 2.98 2.98 34.05 4.61
4070 4483 1.372872 CGCACGTGACATCTGGACA 60.373 57.895 22.23 0.00 0.00 4.02
4071 4484 0.943835 CGCACGTGACATCTGGACAA 60.944 55.000 22.23 0.00 0.00 3.18
4088 4501 0.951040 CAAAGCTCCGGCGTCTCTTT 60.951 55.000 6.01 8.77 44.37 2.52
4097 4510 1.149148 GGCGTCTCTTTCAGGACAAC 58.851 55.000 0.00 0.00 33.19 3.32
4103 4516 0.599204 TCTTTCAGGACAACCGCGAC 60.599 55.000 8.23 0.00 41.83 5.19
4125 4538 2.892425 GCATCTCGGCCCTCAACG 60.892 66.667 0.00 0.00 0.00 4.10
4126 4539 2.579201 CATCTCGGCCCTCAACGT 59.421 61.111 0.00 0.00 0.00 3.99
4139 4552 4.719369 AACGTCGAGCTCCGCACC 62.719 66.667 8.47 0.00 38.37 5.01
4157 4570 2.764128 ATCACCCAGGGCGATCGT 60.764 61.111 17.81 0.00 0.00 3.73
4226 4648 2.097728 GAAACCGTTGCCGATCGC 59.902 61.111 10.32 6.08 35.63 4.58
4241 4663 0.814457 ATCGCTCTCTTCTTCACGCT 59.186 50.000 0.00 0.00 0.00 5.07
4251 4673 1.078918 CTTCACGCTCTCATGGGCA 60.079 57.895 0.00 0.00 0.00 5.36
4253 4675 2.513204 CACGCTCTCATGGGCAGG 60.513 66.667 0.00 0.00 0.00 4.85
4256 4678 2.516460 GCTCTCATGGGCAGGCTG 60.516 66.667 10.94 10.94 0.00 4.85
4259 4681 2.124403 CTCATGGGCAGGCTGGAC 60.124 66.667 17.64 0.00 0.00 4.02
4292 4714 2.185350 CAGGCGTCGCTGATTCCT 59.815 61.111 18.11 0.95 0.00 3.36
4295 4717 1.880340 GGCGTCGCTGATTCCTCTG 60.880 63.158 18.11 0.00 0.00 3.35
4298 4720 0.459237 CGTCGCTGATTCCTCTGCTT 60.459 55.000 3.54 0.00 42.42 3.91
4301 4723 1.760268 CGCTGATTCCTCTGCTTCGC 61.760 60.000 3.54 0.00 42.42 4.70
4319 4741 3.775654 CCCCTGCCGTCTCTGTCC 61.776 72.222 0.00 0.00 0.00 4.02
4328 4750 2.438614 TCTCTGTCCGAGGCGAGG 60.439 66.667 0.00 0.00 40.30 4.63
4331 4753 4.180946 CTGTCCGAGGCGAGGTCG 62.181 72.222 0.00 0.00 43.27 4.79
4349 4771 1.592131 GATGCTGCAGCTCGAGGAG 60.592 63.158 36.61 0.37 42.66 3.69
4394 4817 2.805353 CGCGTCTCTTCCACACCG 60.805 66.667 0.00 0.00 0.00 4.94
4396 4819 2.432628 CGTCTCTTCCACACCGCC 60.433 66.667 0.00 0.00 0.00 6.13
4402 4825 4.652131 TTCCACACCGCCGCCAAT 62.652 61.111 0.00 0.00 0.00 3.16
4412 4835 4.473520 CCGCCAATCCTGCTCCGT 62.474 66.667 0.00 0.00 0.00 4.69
4414 4837 2.892425 GCCAATCCTGCTCCGTCG 60.892 66.667 0.00 0.00 0.00 5.12
4417 4840 3.390521 AATCCTGCTCCGTCGCCA 61.391 61.111 0.00 0.00 0.00 5.69
4418 4841 3.665675 AATCCTGCTCCGTCGCCAC 62.666 63.158 0.00 0.00 0.00 5.01
4424 4847 4.457496 CTCCGTCGCCACCAGCAT 62.457 66.667 0.00 0.00 44.04 3.79
4429 4852 2.182842 GTCGCCACCAGCATCATCC 61.183 63.158 0.00 0.00 44.04 3.51
4430 4853 2.191375 CGCCACCAGCATCATCCT 59.809 61.111 0.00 0.00 44.04 3.24
4433 4856 1.227764 CCACCAGCATCATCCTCGG 60.228 63.158 0.00 0.00 0.00 4.63
4435 4858 2.664185 CCAGCATCATCCTCGGCG 60.664 66.667 0.00 0.00 0.00 6.46
4477 4900 2.668632 GGATGGCGTCCAAGTCCA 59.331 61.111 20.92 0.00 46.96 4.02
4480 4903 1.463674 GATGGCGTCCAAGTCCAAAT 58.536 50.000 2.68 0.00 36.95 2.32
4489 4912 3.056821 GTCCAAGTCCAAATTACAAGGGC 60.057 47.826 0.00 0.00 0.00 5.19
4492 4915 4.202305 CCAAGTCCAAATTACAAGGGCAAA 60.202 41.667 0.00 0.00 0.00 3.68
4507 4930 1.676615 GGCAAAAACCCGGTCTATCGA 60.677 52.381 0.00 0.00 0.00 3.59
4519 4942 1.592669 CTATCGACCGCCCAAGCAG 60.593 63.158 0.00 0.00 39.83 4.24
4520 4943 3.733344 TATCGACCGCCCAAGCAGC 62.733 63.158 0.00 0.00 39.83 5.25
4543 4966 2.670592 TCGGCTTCCTCGTCGTCA 60.671 61.111 0.00 0.00 0.00 4.35
4546 4969 1.227002 GGCTTCCTCGTCGTCATCC 60.227 63.158 0.00 0.00 0.00 3.51
4549 4972 3.391160 TTCCTCGTCGTCATCCGCG 62.391 63.158 0.00 0.00 37.41 6.46
4624 5074 1.508088 GGCTTCTTCAACATGGCGG 59.492 57.895 0.00 0.00 0.00 6.13
4628 5078 0.326595 TTCTTCAACATGGCGGCCTA 59.673 50.000 21.46 7.11 0.00 3.93
4631 5081 0.676466 TTCAACATGGCGGCCTACTG 60.676 55.000 21.46 16.46 0.00 2.74
4645 5095 0.387202 CTACTGCTGATCCCTGGACG 59.613 60.000 0.00 0.00 0.00 4.79
4693 5143 3.007323 ACCGTGCCTTCCCCCTAC 61.007 66.667 0.00 0.00 0.00 3.18
4696 5146 3.007323 GTGCCTTCCCCCTACGGT 61.007 66.667 0.00 0.00 0.00 4.83
4873 5323 2.663196 GGCGCTCCTACAACAGGT 59.337 61.111 7.64 0.00 45.71 4.00
4981 5434 0.532417 ATCAAGCTGCTCTCATCGCC 60.532 55.000 1.00 0.00 0.00 5.54
5029 5482 3.181448 ACACAGGTACGGAGTGGATTTTT 60.181 43.478 13.29 0.00 45.73 1.94
5098 5551 3.654146 TCCATCCATCCCTCCATTCTA 57.346 47.619 0.00 0.00 0.00 2.10
5137 5590 1.413077 GGTGATGGCTCTACTGTACCC 59.587 57.143 0.00 0.00 0.00 3.69
5168 5622 1.202879 TCGGCACCACCTCTTTTCATT 60.203 47.619 0.00 0.00 35.61 2.57
5174 5628 4.037923 GCACCACCTCTTTTCATTTTCTCA 59.962 41.667 0.00 0.00 0.00 3.27
5181 5635 5.048434 CCTCTTTTCATTTTCTCACTCACCC 60.048 44.000 0.00 0.00 0.00 4.61
5227 5681 5.571741 GTCGCTCCTGCTTTAATTAAAAACC 59.428 40.000 11.62 4.54 36.97 3.27
5232 5686 7.489435 GCTCCTGCTTTAATTAAAAACCTGATC 59.511 37.037 11.62 0.00 36.03 2.92
5379 5833 4.015406 AACGGCGCATCCACTCCA 62.015 61.111 10.83 0.00 34.01 3.86
5380 5834 3.329542 AACGGCGCATCCACTCCAT 62.330 57.895 10.83 0.00 34.01 3.41
5382 5836 2.592861 GGCGCATCCACTCCATCC 60.593 66.667 10.83 0.00 34.01 3.51
5383 5837 2.592861 GCGCATCCACTCCATCCC 60.593 66.667 0.30 0.00 0.00 3.85
5725 6179 4.517285 GCTCTAAATCTGATGTTCACCCA 58.483 43.478 0.00 0.00 0.00 4.51
5783 6237 1.098050 CTCCCTTCCCATTCGCTTTG 58.902 55.000 0.00 0.00 0.00 2.77
5799 6253 3.382855 GCTTTGTGCAATGTGACAATGA 58.617 40.909 4.56 0.00 42.31 2.57
5869 6323 1.512926 TTCTCCTTCGCTGTTCTTGC 58.487 50.000 0.00 0.00 0.00 4.01
5955 6409 2.392662 CACTCTTCTCATCCAGGCCTA 58.607 52.381 3.98 0.00 0.00 3.93
5977 6431 2.578664 CCGCCTCATTTTTGGGCC 59.421 61.111 0.00 0.00 42.58 5.80
6027 6481 3.061848 CATTCGCCCCACCACCAC 61.062 66.667 0.00 0.00 0.00 4.16
6039 6493 2.282462 CACCACCAGCCCCAAGTC 60.282 66.667 0.00 0.00 0.00 3.01
6093 6547 0.970640 TCCTACAACAGCCTACGCAA 59.029 50.000 0.00 0.00 37.52 4.85
6190 6644 3.777465 TTCCTCGGTTACTCTGATTCG 57.223 47.619 0.00 0.00 0.00 3.34
6279 6733 3.562182 ACGAAACCATCTTTCCCTTTGT 58.438 40.909 0.00 0.00 0.00 2.83
6310 6764 1.167851 CGCCAGATTTTTCTGCTCCA 58.832 50.000 0.00 0.00 36.46 3.86
6334 6788 1.633945 ACTACATCCTCCAACCCCAAC 59.366 52.381 0.00 0.00 0.00 3.77
6490 6962 2.190578 CCGCCTCCCTCCAATGAC 59.809 66.667 0.00 0.00 0.00 3.06
6494 6966 1.522569 CCTCCCTCCAATGACCGTC 59.477 63.158 0.00 0.00 0.00 4.79
6512 6984 0.256752 TCTTCCCATGGCATCCACTG 59.743 55.000 6.09 0.00 35.80 3.66
6531 7003 3.420482 CCAATCCGCCCCCTCCTT 61.420 66.667 0.00 0.00 0.00 3.36
6568 7040 0.749649 CCTCTCCCTCCACAGATTCG 59.250 60.000 0.00 0.00 0.00 3.34
6573 7045 2.892425 CTCCACAGATTCGCCCGC 60.892 66.667 0.00 0.00 0.00 6.13
6620 7095 2.317992 TTTGTCCCCCACCCATGCAA 62.318 55.000 0.00 0.00 0.00 4.08
6654 7129 0.037326 TCTGATTGCTCGTCACCACC 60.037 55.000 0.00 0.00 0.00 4.61
6665 7140 2.281414 CACCACCGCATCCACACA 60.281 61.111 0.00 0.00 0.00 3.72
6682 7157 2.066393 CATCCCGCCTTCTCCTCCA 61.066 63.158 0.00 0.00 0.00 3.86
6792 7267 2.094675 CAAATCAGGATTCCGCCAACT 58.905 47.619 0.00 0.00 0.00 3.16
6817 7292 4.379243 CGCCTCAACCTCACCGCT 62.379 66.667 0.00 0.00 0.00 5.52
6866 7344 3.006537 ACACTCTTACAAAGCCGCTCTTA 59.993 43.478 0.00 0.00 33.88 2.10
6922 7400 2.462456 ATGACGCTCTTCTGCAGAAA 57.538 45.000 28.16 17.93 33.07 2.52
6941 7419 5.745294 CAGAAAAACACATGGTCTCTTGTTG 59.255 40.000 0.00 0.00 32.54 3.33
7140 7620 4.060205 GTGGTTCTTAGTCTTGCCGTTTA 58.940 43.478 0.00 0.00 0.00 2.01
7340 7821 2.467305 CGTTTTGCCACATTTCTTCACG 59.533 45.455 0.00 0.00 0.00 4.35
7646 8128 1.617018 CCATCCCTCTCGCACTCCAA 61.617 60.000 0.00 0.00 0.00 3.53
7719 8201 3.449227 CTACCGCAGCCTCACCGA 61.449 66.667 0.00 0.00 0.00 4.69
7799 8281 3.876914 CTGTTTATACATGCATGACCCGT 59.123 43.478 32.75 12.71 32.86 5.28
7835 8317 7.865385 ACTACAATCATGTTAAACGCATTTTGT 59.135 29.630 0.00 0.00 41.05 2.83
7908 8390 2.612972 CCACCACTCTCACAGCGTATTT 60.613 50.000 0.00 0.00 0.00 1.40
7925 8407 4.082787 CGTATTTTGATGCAGACTGGGTTT 60.083 41.667 4.26 0.00 0.00 3.27
7927 8409 0.961019 TTGATGCAGACTGGGTTTGC 59.039 50.000 4.26 6.29 42.76 3.68
7928 8410 0.895100 TGATGCAGACTGGGTTTGCC 60.895 55.000 4.26 0.00 41.95 4.52
8001 8483 7.064609 GTGATAACTTGATTTCATGGTCTTCGA 59.935 37.037 0.00 0.00 0.00 3.71
8007 8489 5.171476 TGATTTCATGGTCTTCGAAGAGAC 58.829 41.667 27.70 22.25 38.43 3.36
8030 8512 2.289945 GCTCACTGTTTCCAGGTCATCT 60.290 50.000 0.00 0.00 43.36 2.90
8075 8557 4.160635 CACGCCATCGCCGAAACC 62.161 66.667 0.00 0.00 39.84 3.27
8090 8572 0.878961 AAACCGTCTGGCTTCGTCAC 60.879 55.000 0.00 0.00 39.70 3.67
8107 8589 2.103934 CCTTCTCAGCGAGCTCCG 59.896 66.667 8.47 4.62 42.21 4.63
8135 8617 0.892755 TCCATCAAGCTACCGTCGTT 59.107 50.000 0.00 0.00 0.00 3.85
8151 8633 9.622004 CTACCGTCGTTTATTGTGATAATATCT 57.378 33.333 1.66 0.00 0.00 1.98
8152 8634 8.516811 ACCGTCGTTTATTGTGATAATATCTC 57.483 34.615 1.66 0.00 0.00 2.75
8153 8635 7.597743 ACCGTCGTTTATTGTGATAATATCTCC 59.402 37.037 1.66 0.00 0.00 3.71
8159 8641 7.889589 TTATTGTGATAATATCTCCGCTGTG 57.110 36.000 1.66 0.00 0.00 3.66
8174 8656 3.062099 CCGCTGTGTACATGTCATGTAAC 59.938 47.826 24.01 21.69 46.36 2.50
8183 8665 4.832248 ACATGTCATGTAACCCTGTACAG 58.168 43.478 16.99 16.34 42.78 2.74
8213 8695 8.003224 CGTCGTACTAAACACATAGAGATAGAC 58.997 40.741 0.00 0.00 0.00 2.59
8340 15545 2.049063 AGCCAGTCTCAACGTCGC 60.049 61.111 0.00 0.00 0.00 5.19
8342 15547 2.338620 CCAGTCTCAACGTCGCCA 59.661 61.111 0.00 0.00 0.00 5.69
8405 15612 1.299468 CTCAGCCCACGATCTACGC 60.299 63.158 0.00 0.00 46.94 4.42
8406 15613 2.004808 CTCAGCCCACGATCTACGCA 62.005 60.000 0.00 0.00 46.94 5.24
8407 15614 1.878522 CAGCCCACGATCTACGCAC 60.879 63.158 0.00 0.00 46.94 5.34
8408 15615 2.954868 GCCCACGATCTACGCACG 60.955 66.667 0.00 0.00 46.94 5.34
8409 15616 2.795973 CCCACGATCTACGCACGA 59.204 61.111 0.00 0.00 46.94 4.35
8410 15617 1.359117 CCCACGATCTACGCACGAT 59.641 57.895 0.00 0.00 46.94 3.73
8411 15618 0.660595 CCCACGATCTACGCACGATC 60.661 60.000 0.00 0.00 46.94 3.69
8413 15620 0.660595 CACGATCTACGCACGATCCC 60.661 60.000 0.00 0.00 46.94 3.85
8443 15656 3.670377 GCTTTCGGTTGGGCGCTT 61.670 61.111 7.64 0.00 0.00 4.68
8465 15678 4.695606 TCCCTCCTATATGTAATCCCACC 58.304 47.826 0.00 0.00 0.00 4.61
8479 15692 2.747177 TCCCACCTGTACTCTGTATGG 58.253 52.381 0.00 0.00 0.00 2.74
8506 15719 9.793259 AATCAAGGAAAGTACTCAATCAGTTTA 57.207 29.630 0.00 0.00 36.43 2.01
8538 15751 2.429930 CCAGGTGGTTTGGCTCGA 59.570 61.111 0.00 0.00 0.00 4.04
8578 15791 7.010367 TGAGTGAATTTTGAGCAATTGTTTGAC 59.990 33.333 7.40 0.00 34.60 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 5.954349 CGCTTCGTTTCAAAATAGATGACTC 59.046 40.000 0.00 0.00 0.00 3.36
12 13 5.637810 TCGCTTCGTTTCAAAATAGATGACT 59.362 36.000 0.00 0.00 0.00 3.41
13 14 5.854157 TCGCTTCGTTTCAAAATAGATGAC 58.146 37.500 0.00 0.00 0.00 3.06
14 15 5.637810 ACTCGCTTCGTTTCAAAATAGATGA 59.362 36.000 0.00 0.00 0.00 2.92
15 16 5.858475 ACTCGCTTCGTTTCAAAATAGATG 58.142 37.500 0.00 0.00 0.00 2.90
16 17 7.331193 AGTTACTCGCTTCGTTTCAAAATAGAT 59.669 33.333 0.00 0.00 0.00 1.98
17 18 6.643770 AGTTACTCGCTTCGTTTCAAAATAGA 59.356 34.615 0.00 0.00 0.00 1.98
18 19 6.818416 AGTTACTCGCTTCGTTTCAAAATAG 58.182 36.000 0.00 0.00 0.00 1.73
19 20 6.774354 AGTTACTCGCTTCGTTTCAAAATA 57.226 33.333 0.00 0.00 0.00 1.40
20 21 5.668558 AGTTACTCGCTTCGTTTCAAAAT 57.331 34.783 0.00 0.00 0.00 1.82
21 22 5.473796 AAGTTACTCGCTTCGTTTCAAAA 57.526 34.783 0.00 0.00 0.00 2.44
22 23 6.774354 ATAAGTTACTCGCTTCGTTTCAAA 57.226 33.333 0.00 0.00 0.00 2.69
23 24 8.470040 AATATAAGTTACTCGCTTCGTTTCAA 57.530 30.769 0.00 0.00 0.00 2.69
24 25 8.470040 AAATATAAGTTACTCGCTTCGTTTCA 57.530 30.769 0.00 0.00 0.00 2.69
28 29 9.740239 TCATAAAATATAAGTTACTCGCTTCGT 57.260 29.630 0.00 0.00 0.00 3.85
137 138 3.383620 TGATGGCAAATTGTGTTGGTC 57.616 42.857 0.00 0.00 0.00 4.02
141 144 5.055812 ACGATTTTGATGGCAAATTGTGTT 58.944 33.333 0.00 0.00 43.07 3.32
148 151 2.287849 TGCGAACGATTTTGATGGCAAA 60.288 40.909 0.00 0.00 41.97 3.68
169 172 1.243902 ACGTTCGTTGGATGGCAATT 58.756 45.000 0.00 0.00 0.00 2.32
170 173 1.199097 GAACGTTCGTTGGATGGCAAT 59.801 47.619 13.36 0.00 0.00 3.56
197 200 0.527565 CATGGAAAAGGACCGGCTTG 59.472 55.000 0.00 0.00 0.00 4.01
223 226 3.793888 CCGGGGGTAGTGGGAAGC 61.794 72.222 0.00 0.00 0.00 3.86
274 277 2.125106 GAAGGGAATGGTCGCGCT 60.125 61.111 5.56 0.00 41.49 5.92
283 286 3.049080 GCTGCGGGAGGAAGGGAAT 62.049 63.158 0.00 0.00 0.00 3.01
368 371 1.532038 GAGAGGGACTAGGGGTAGGA 58.468 60.000 0.00 0.00 41.55 2.94
371 374 1.003347 GGGGAGAGGGACTAGGGGTA 61.003 65.000 0.00 0.00 41.55 3.69
373 376 2.615773 GGGGAGAGGGACTAGGGG 59.384 72.222 0.00 0.00 41.55 4.79
402 405 2.304180 CCCTGCTTATCCTATCCAGTGG 59.696 54.545 1.40 1.40 0.00 4.00
412 415 2.111251 GCCGGACCCTGCTTATCC 59.889 66.667 5.05 0.00 0.00 2.59
413 416 1.069935 GAGCCGGACCCTGCTTATC 59.930 63.158 5.05 0.00 36.66 1.75
414 417 2.797278 CGAGCCGGACCCTGCTTAT 61.797 63.158 5.05 0.00 36.66 1.73
415 418 3.458163 CGAGCCGGACCCTGCTTA 61.458 66.667 5.05 0.00 36.66 3.09
464 467 2.355115 GGACCAATCCGGGCTGTT 59.645 61.111 0.00 0.00 45.62 3.16
478 481 1.226717 CGGCGTCAGCTAAGAGGAC 60.227 63.158 0.00 0.00 44.37 3.85
600 646 2.423446 GTAGATGCCTCCGCTGGG 59.577 66.667 0.00 0.00 35.36 4.45
603 649 1.685765 TGGTGTAGATGCCTCCGCT 60.686 57.895 0.00 0.00 35.36 5.52
650 696 3.028094 AGAGTTAGGCCGTCTAATGGA 57.972 47.619 0.00 0.00 39.82 3.41
651 697 3.132289 TCAAGAGTTAGGCCGTCTAATGG 59.868 47.826 0.00 0.00 39.82 3.16
652 698 4.386867 TCAAGAGTTAGGCCGTCTAATG 57.613 45.455 0.00 0.68 39.82 1.90
653 699 4.466726 AGTTCAAGAGTTAGGCCGTCTAAT 59.533 41.667 0.00 0.00 39.82 1.73
654 700 3.830755 AGTTCAAGAGTTAGGCCGTCTAA 59.169 43.478 0.00 0.00 35.73 2.10
655 701 3.428532 AGTTCAAGAGTTAGGCCGTCTA 58.571 45.455 0.00 0.00 0.00 2.59
656 702 2.249139 AGTTCAAGAGTTAGGCCGTCT 58.751 47.619 0.00 0.00 0.00 4.18
657 703 2.745515 AGTTCAAGAGTTAGGCCGTC 57.254 50.000 0.00 0.00 0.00 4.79
658 704 4.024670 AGATAGTTCAAGAGTTAGGCCGT 58.975 43.478 0.00 0.00 0.00 5.68
659 705 4.657436 AGATAGTTCAAGAGTTAGGCCG 57.343 45.455 0.00 0.00 0.00 6.13
660 706 7.533289 AGATAGATAGTTCAAGAGTTAGGCC 57.467 40.000 0.00 0.00 0.00 5.19
661 707 9.292195 ACTAGATAGATAGTTCAAGAGTTAGGC 57.708 37.037 0.00 0.00 31.89 3.93
695 741 7.469181 GCATAGGCTAGTTCATACAAGCAAATT 60.469 37.037 0.00 0.00 36.68 1.82
714 760 6.176183 AGGATAGTTCATACATTGCATAGGC 58.824 40.000 0.00 0.00 41.68 3.93
752 798 8.624367 ACATATAGTTCACGCTATCTAGTTCT 57.376 34.615 0.00 0.00 34.00 3.01
774 825 7.540745 CCGAATTTCCAACTCGATTTAAAACAT 59.459 33.333 0.00 0.00 34.52 2.71
797 848 4.385825 ACAGATCTTGTAAACTTTGCCGA 58.614 39.130 0.00 0.00 38.56 5.54
811 862 2.009774 CGGATCGGCAAAACAGATCTT 58.990 47.619 0.00 0.00 45.94 2.40
812 863 1.066143 ACGGATCGGCAAAACAGATCT 60.066 47.619 0.00 0.00 45.94 2.75
857 908 4.493545 GCAAATGTCGTTTACAGTATCCCG 60.494 45.833 0.00 0.00 42.70 5.14
888 939 6.348132 GCATCTCTATCAGATCCCGTATATCG 60.348 46.154 0.00 0.00 40.20 2.92
890 941 6.609876 AGCATCTCTATCAGATCCCGTATAT 58.390 40.000 0.00 0.00 40.20 0.86
960 1011 4.322198 GGGATTGCAGCTGAAATTTCTTCA 60.322 41.667 21.18 0.90 0.00 3.02
1043 1094 1.737735 TCGATGTTGAGCAGCCGTG 60.738 57.895 0.00 0.00 0.00 4.94
1044 1095 1.738099 GTCGATGTTGAGCAGCCGT 60.738 57.895 0.00 0.00 0.00 5.68
1148 1199 1.526887 CATGTGGTGCCCGGATAGT 59.473 57.895 0.73 0.00 0.00 2.12
1300 1375 0.392998 CCGAAGTCTTGGGGGTGATG 60.393 60.000 5.74 0.00 0.00 3.07
1400 1475 2.111255 ACTGGTAACTCCCTGAGTACCA 59.889 50.000 17.08 17.08 42.59 3.25
1409 1484 0.608308 GGTTGGCACTGGTAACTCCC 60.608 60.000 0.00 0.00 34.77 4.30
1413 1488 1.173913 GGATGGTTGGCACTGGTAAC 58.826 55.000 0.00 0.00 0.00 2.50
1447 1522 2.746277 GGTGGATGGTGGTGCGAC 60.746 66.667 0.00 0.00 0.00 5.19
1452 1527 0.827507 GCAAGTTGGTGGATGGTGGT 60.828 55.000 4.75 0.00 0.00 4.16
1454 1529 0.314935 GTGCAAGTTGGTGGATGGTG 59.685 55.000 4.75 0.00 0.00 4.17
1521 1596 1.149361 ACTCGTCGCACGCAAGAAAA 61.149 50.000 4.15 0.00 42.21 2.29
1556 1631 1.014352 CCTTGCGGCAAGTATGTACC 58.986 55.000 33.50 0.00 39.58 3.34
1595 1670 2.233922 TCCTTCATGTCTCCGAAGAACC 59.766 50.000 0.00 0.00 40.94 3.62
1626 1703 1.446792 CTTGATCTCCACGCGTGCT 60.447 57.895 33.17 16.77 0.00 4.40
1668 1745 1.063649 GATGAAGTGCAGCATGGCG 59.936 57.895 0.00 0.00 35.86 5.69
1707 1784 2.670592 TCGAGCGGTCGGTCAAGA 60.671 61.111 33.60 13.25 46.80 3.02
1938 2016 2.290641 GCTTATACCCATTTGTCGCCAG 59.709 50.000 0.00 0.00 0.00 4.85
1947 2025 5.450818 TCTTCAAGGTGCTTATACCCATT 57.549 39.130 0.00 0.00 41.83 3.16
1969 2047 0.540597 GAGGACCAAAGGGCAGCTTT 60.541 55.000 0.00 0.00 37.90 3.51
1988 2067 2.416162 GGTAGACTTGAGAAGCTCGGTG 60.416 54.545 0.00 0.00 32.35 4.94
1991 2070 1.819288 TGGGTAGACTTGAGAAGCTCG 59.181 52.381 0.00 0.00 32.35 5.03
2007 2090 4.263068 CCTTCAACTCTTACTCACATGGGT 60.263 45.833 0.00 0.00 0.00 4.51
2008 2091 4.256920 CCTTCAACTCTTACTCACATGGG 58.743 47.826 0.00 0.00 0.00 4.00
2085 2182 8.039224 CATTTTACGTAAATGCAGACATAAGC 57.961 34.615 20.72 0.00 44.69 3.09
2103 2200 6.701400 AGATGCACACAAGTTTTCCATTTTAC 59.299 34.615 0.00 0.00 0.00 2.01
2139 2236 5.992829 TGAAAGCGTTAAGTTCCTCATAACA 59.007 36.000 0.00 0.00 31.99 2.41
2156 2253 1.167851 TTGGAGGAGCAATGAAAGCG 58.832 50.000 0.00 0.00 37.01 4.68
2181 2278 9.241317 CTTGGACGACGTTATACTAAATTACAT 57.759 33.333 0.13 0.00 0.00 2.29
2182 2279 8.458052 TCTTGGACGACGTTATACTAAATTACA 58.542 33.333 0.13 0.00 0.00 2.41
2183 2280 8.841444 TCTTGGACGACGTTATACTAAATTAC 57.159 34.615 0.13 0.00 0.00 1.89
2263 2360 5.165676 TGTACAAAACTATACACGCTCTGG 58.834 41.667 0.00 0.00 0.00 3.86
2269 2366 7.960195 TGCAAATCATGTACAAAACTATACACG 59.040 33.333 0.00 0.00 34.24 4.49
2295 2392 4.873810 TTGTGTGGCTGCGGCTGT 62.874 61.111 18.85 0.00 38.73 4.40
2300 2397 2.693762 CCTGGATTGTGTGGCTGCG 61.694 63.158 0.00 0.00 0.00 5.18
2303 2400 0.326264 GAGACCTGGATTGTGTGGCT 59.674 55.000 0.00 0.00 0.00 4.75
2325 2422 2.892425 GACTTGCTGGATCCGCCG 60.892 66.667 20.83 15.48 40.66 6.46
2326 2423 1.522580 GAGACTTGCTGGATCCGCC 60.523 63.158 20.83 9.70 37.10 6.13
2327 2424 1.880340 CGAGACTTGCTGGATCCGC 60.880 63.158 18.08 18.08 0.00 5.54
2328 2425 0.526524 GACGAGACTTGCTGGATCCG 60.527 60.000 7.39 3.14 0.00 4.18
2329 2426 0.179097 GGACGAGACTTGCTGGATCC 60.179 60.000 4.20 4.20 0.00 3.36
2330 2427 0.526524 CGGACGAGACTTGCTGGATC 60.527 60.000 0.00 0.00 0.00 3.36
2331 2428 1.513158 CGGACGAGACTTGCTGGAT 59.487 57.895 0.00 0.00 0.00 3.41
2332 2429 2.636412 CCGGACGAGACTTGCTGGA 61.636 63.158 0.00 0.00 0.00 3.86
2333 2430 1.949847 ATCCGGACGAGACTTGCTGG 61.950 60.000 6.12 5.91 0.00 4.85
2334 2431 0.803768 CATCCGGACGAGACTTGCTG 60.804 60.000 6.12 0.00 0.00 4.41
2335 2432 1.513158 CATCCGGACGAGACTTGCT 59.487 57.895 6.12 0.00 0.00 3.91
2336 2433 2.167861 GCATCCGGACGAGACTTGC 61.168 63.158 6.12 7.36 0.00 4.01
2337 2434 1.519455 GGCATCCGGACGAGACTTG 60.519 63.158 6.12 0.00 0.00 3.16
2338 2435 2.893398 GGCATCCGGACGAGACTT 59.107 61.111 6.12 0.00 0.00 3.01
2354 2451 4.827087 AGATCTGGCAGCGCACGG 62.827 66.667 11.47 4.52 0.00 4.94
2355 2452 3.561213 CAGATCTGGCAGCGCACG 61.561 66.667 15.38 0.01 0.00 5.34
2356 2453 2.435586 ACAGATCTGGCAGCGCAC 60.436 61.111 26.08 0.00 34.19 5.34
2357 2454 2.435410 CACAGATCTGGCAGCGCA 60.435 61.111 26.08 0.00 34.19 6.09
2358 2455 2.578163 TACCACAGATCTGGCAGCGC 62.578 60.000 26.08 0.00 34.20 5.92
2359 2456 0.108186 TTACCACAGATCTGGCAGCG 60.108 55.000 26.08 10.70 34.20 5.18
2360 2457 1.065854 ACTTACCACAGATCTGGCAGC 60.066 52.381 26.08 0.00 34.20 5.25
2361 2458 2.419297 GGACTTACCACAGATCTGGCAG 60.419 54.545 26.08 15.93 38.79 4.85
2362 2459 1.555075 GGACTTACCACAGATCTGGCA 59.445 52.381 26.08 5.76 38.79 4.92
2363 2460 1.471676 CGGACTTACCACAGATCTGGC 60.472 57.143 26.08 0.00 38.90 4.85
2364 2461 1.137086 CCGGACTTACCACAGATCTGG 59.863 57.143 26.08 13.28 38.90 3.86
2365 2462 1.137086 CCCGGACTTACCACAGATCTG 59.863 57.143 21.37 21.37 38.90 2.90
2366 2463 1.486211 CCCGGACTTACCACAGATCT 58.514 55.000 0.73 0.00 38.90 2.75
2367 2464 0.179081 GCCCGGACTTACCACAGATC 60.179 60.000 0.73 0.00 38.90 2.75
2368 2465 0.907704 TGCCCGGACTTACCACAGAT 60.908 55.000 0.73 0.00 38.90 2.90
2369 2466 0.907704 ATGCCCGGACTTACCACAGA 60.908 55.000 0.73 0.00 38.90 3.41
2370 2467 0.828022 TATGCCCGGACTTACCACAG 59.172 55.000 0.73 0.00 38.90 3.66
2371 2468 0.538118 GTATGCCCGGACTTACCACA 59.462 55.000 0.73 0.00 38.90 4.17
2372 2469 0.538118 TGTATGCCCGGACTTACCAC 59.462 55.000 0.73 0.00 38.90 4.16
2373 2470 0.828022 CTGTATGCCCGGACTTACCA 59.172 55.000 0.73 0.00 38.90 3.25
2374 2471 0.532196 GCTGTATGCCCGGACTTACC 60.532 60.000 0.73 0.00 35.15 2.85
2375 2472 0.177141 TGCTGTATGCCCGGACTTAC 59.823 55.000 0.73 4.68 42.00 2.34
2376 2473 0.177141 GTGCTGTATGCCCGGACTTA 59.823 55.000 0.73 0.00 42.00 2.24
2377 2474 1.078426 GTGCTGTATGCCCGGACTT 60.078 57.895 0.73 0.00 42.00 3.01
2378 2475 1.626356 ATGTGCTGTATGCCCGGACT 61.626 55.000 0.73 0.00 42.00 3.85
2379 2476 1.153168 ATGTGCTGTATGCCCGGAC 60.153 57.895 0.73 0.00 42.00 4.79
2380 2477 1.153188 CATGTGCTGTATGCCCGGA 60.153 57.895 0.73 0.00 42.00 5.14
2381 2478 2.837883 GCATGTGCTGTATGCCCGG 61.838 63.158 0.00 0.00 43.88 5.73
2382 2479 2.717485 GCATGTGCTGTATGCCCG 59.283 61.111 8.56 0.00 43.88 6.13
2398 2495 1.680338 ATATTTTGTGAGCCGGGAGC 58.320 50.000 2.18 0.00 44.25 4.70
2399 2496 4.718940 AAAATATTTTGTGAGCCGGGAG 57.281 40.909 12.62 0.00 0.00 4.30
2400 2497 4.524714 TGAAAAATATTTTGTGAGCCGGGA 59.475 37.500 14.04 0.00 0.00 5.14
2401 2498 4.815269 TGAAAAATATTTTGTGAGCCGGG 58.185 39.130 14.04 0.00 0.00 5.73
2402 2499 5.519927 GGATGAAAAATATTTTGTGAGCCGG 59.480 40.000 14.04 0.00 0.00 6.13
2403 2500 6.332630 AGGATGAAAAATATTTTGTGAGCCG 58.667 36.000 14.04 0.00 0.00 5.52
2404 2501 8.552083 AAAGGATGAAAAATATTTTGTGAGCC 57.448 30.769 14.04 12.22 0.00 4.70
2692 3073 0.740868 GATGCGTACAAGCTGCTCCA 60.741 55.000 1.00 0.00 38.13 3.86
2781 3163 5.400066 TGAATGACAAAGTCCGATCTACA 57.600 39.130 0.00 0.00 0.00 2.74
2807 3189 2.056223 GCAACATGCTGGGGCTCAT 61.056 57.895 0.00 0.00 40.96 2.90
3278 3663 5.007385 TCTTAGACCTAATGCTTCCGTTC 57.993 43.478 0.00 0.00 0.00 3.95
3348 3733 5.665701 TGGCTAGACTTATGGATCCCTAAT 58.334 41.667 9.90 0.00 0.00 1.73
3506 3899 1.467734 AGTCAGCGGTCTAACACTACG 59.532 52.381 0.00 0.00 0.00 3.51
3507 3900 2.228343 ACAGTCAGCGGTCTAACACTAC 59.772 50.000 0.00 0.00 0.00 2.73
3508 3901 2.228103 CACAGTCAGCGGTCTAACACTA 59.772 50.000 0.00 0.00 0.00 2.74
3509 3902 1.000163 CACAGTCAGCGGTCTAACACT 60.000 52.381 0.00 0.00 0.00 3.55
3510 3903 1.419374 CACAGTCAGCGGTCTAACAC 58.581 55.000 0.00 0.00 0.00 3.32
3511 3904 0.319555 GCACAGTCAGCGGTCTAACA 60.320 55.000 0.00 0.00 0.00 2.41
3512 3905 0.038159 AGCACAGTCAGCGGTCTAAC 60.038 55.000 0.00 0.00 37.01 2.34
3513 3906 0.243907 GAGCACAGTCAGCGGTCTAA 59.756 55.000 0.00 0.00 37.01 2.10
3514 3907 0.893727 TGAGCACAGTCAGCGGTCTA 60.894 55.000 0.00 0.00 37.01 2.59
3515 3908 1.748329 TTGAGCACAGTCAGCGGTCT 61.748 55.000 0.00 0.00 37.01 3.85
3582 3977 4.080863 GTGGGATTACATATAGGAGGGCAG 60.081 50.000 0.00 0.00 0.00 4.85
3603 3999 6.481313 CCTTGATTCCATACAGAGTACATGTG 59.519 42.308 9.11 0.00 32.02 3.21
3663 4059 0.106419 AGGAGAGGATCGTGGGAGAC 60.106 60.000 0.00 0.00 42.67 3.36
3782 4192 2.158385 GCTGAAGGAGAGAGAGGGGATA 60.158 54.545 0.00 0.00 0.00 2.59
3917 4330 2.571757 GCGTCGGAGATGTGGTGA 59.428 61.111 0.00 0.00 46.97 4.02
3941 4354 4.467084 GGATTGTGCGGCTCGGGA 62.467 66.667 0.00 0.00 0.00 5.14
3956 4369 1.293498 GTCTTTGAGCCAGCGAGGA 59.707 57.895 2.12 0.00 41.22 3.71
3986 4399 1.165270 GCGTGTAAAGCCACTGGATT 58.835 50.000 0.00 0.00 34.33 3.01
3998 4411 1.447140 GGTGGAGATGCGCGTGTAA 60.447 57.895 6.97 0.00 0.00 2.41
4034 4447 2.110213 GTGGCACCGTCCTTGACA 59.890 61.111 6.29 0.00 32.09 3.58
4052 4465 0.943835 TTGTCCAGATGTCACGTGCG 60.944 55.000 11.67 0.00 0.00 5.34
4058 4471 1.338105 CGGAGCTTTGTCCAGATGTCA 60.338 52.381 0.00 0.00 36.23 3.58
4070 4483 0.670854 GAAAGAGACGCCGGAGCTTT 60.671 55.000 5.05 7.38 36.60 3.51
4071 4484 1.079750 GAAAGAGACGCCGGAGCTT 60.080 57.895 5.05 0.00 36.60 3.74
4107 4520 2.892425 GTTGAGGGCCGAGATGCG 60.892 66.667 0.00 0.00 40.47 4.73
4115 4528 3.991536 GAGCTCGACGTTGAGGGCC 62.992 68.421 29.62 15.90 36.47 5.80
4151 4564 2.126071 ACGCCAACAGGACGATCG 60.126 61.111 14.88 14.88 0.00 3.69
4157 4570 0.033504 GACAGAAGACGCCAACAGGA 59.966 55.000 0.00 0.00 0.00 3.86
4163 4576 3.289128 CTGTTGACAGAAGACGCCA 57.711 52.632 5.19 0.00 46.59 5.69
4219 4641 1.833860 GTGAAGAAGAGAGCGATCGG 58.166 55.000 18.30 0.00 0.00 4.18
4226 4648 3.437428 CATGAGAGCGTGAAGAAGAGAG 58.563 50.000 0.00 0.00 32.63 3.20
4241 4663 2.285592 TCCAGCCTGCCCATGAGA 60.286 61.111 0.00 0.00 0.00 3.27
4251 4673 4.070552 GAACCGCTCGTCCAGCCT 62.071 66.667 0.00 0.00 46.74 4.58
4277 4699 1.880340 CAGAGGAATCAGCGACGCC 60.880 63.158 17.79 0.00 0.00 5.68
4301 4723 3.775654 GACAGAGACGGCAGGGGG 61.776 72.222 0.00 0.00 0.00 5.40
4313 4735 2.750637 GACCTCGCCTCGGACAGA 60.751 66.667 0.00 0.00 0.00 3.41
4316 4738 3.210528 ATCGACCTCGCCTCGGAC 61.211 66.667 0.00 0.00 39.60 4.79
4319 4741 3.893763 AGCATCGACCTCGCCTCG 61.894 66.667 0.00 0.00 39.60 4.63
4325 4747 1.882167 GAGCTGCAGCATCGACCTC 60.882 63.158 38.24 22.07 45.16 3.85
4326 4748 2.186384 GAGCTGCAGCATCGACCT 59.814 61.111 38.24 17.87 45.16 3.85
4328 4750 2.202663 TCGAGCTGCAGCATCGAC 60.203 61.111 36.89 24.28 41.75 4.20
4331 4753 1.592131 CTCCTCGAGCTGCAGCATC 60.592 63.158 38.24 28.56 45.16 3.91
4378 4801 3.112709 GCGGTGTGGAAGAGACGC 61.113 66.667 0.00 0.00 40.19 5.19
4396 4819 2.892425 GACGGAGCAGGATTGGCG 60.892 66.667 0.00 0.00 36.08 5.69
4399 4822 2.892425 GGCGACGGAGCAGGATTG 60.892 66.667 6.70 0.00 39.27 2.67
4400 4823 3.390521 TGGCGACGGAGCAGGATT 61.391 61.111 6.70 0.00 39.27 3.01
4401 4824 4.148825 GTGGCGACGGAGCAGGAT 62.149 66.667 6.70 0.00 39.27 3.24
4411 4834 2.182842 GGATGATGCTGGTGGCGAC 61.183 63.158 0.00 0.00 45.43 5.19
4412 4835 2.190313 GGATGATGCTGGTGGCGA 59.810 61.111 0.00 0.00 45.43 5.54
4414 4837 1.890979 CGAGGATGATGCTGGTGGC 60.891 63.158 0.00 0.00 42.22 5.01
4417 4840 2.507944 GCCGAGGATGATGCTGGT 59.492 61.111 0.00 0.00 0.00 4.00
4418 4841 2.664185 CGCCGAGGATGATGCTGG 60.664 66.667 0.00 0.00 0.00 4.85
4420 4843 4.615815 GGCGCCGAGGATGATGCT 62.616 66.667 12.58 0.00 0.00 3.79
4471 4894 5.622346 TTTTGCCCTTGTAATTTGGACTT 57.378 34.783 0.00 0.00 0.00 3.01
4474 4897 4.445019 GGGTTTTTGCCCTTGTAATTTGGA 60.445 41.667 0.00 0.00 45.22 3.53
4477 4900 3.495276 CCGGGTTTTTGCCCTTGTAATTT 60.495 43.478 0.00 0.00 46.47 1.82
4480 4903 1.041437 CCGGGTTTTTGCCCTTGTAA 58.959 50.000 0.00 0.00 46.47 2.41
4501 4924 1.592669 CTGCTTGGGCGGTCGATAG 60.593 63.158 0.00 0.00 42.25 2.08
4510 4933 3.426568 GACGAGTGCTGCTTGGGC 61.427 66.667 0.00 0.00 39.26 5.36
4513 4936 3.782244 GCCGACGAGTGCTGCTTG 61.782 66.667 0.00 0.00 34.71 4.01
4519 4942 2.507324 GAGGAAGCCGACGAGTGC 60.507 66.667 0.00 0.00 0.00 4.40
4520 4943 2.202492 CGAGGAAGCCGACGAGTG 60.202 66.667 0.00 0.00 32.43 3.51
4521 4944 2.672307 ACGAGGAAGCCGACGAGT 60.672 61.111 0.00 0.00 34.07 4.18
4522 4945 2.100603 GACGAGGAAGCCGACGAG 59.899 66.667 0.00 0.00 34.07 4.18
4523 4946 3.796443 CGACGAGGAAGCCGACGA 61.796 66.667 0.00 0.00 44.84 4.20
4603 5026 1.937546 GCCATGTTGAAGAAGCCGGG 61.938 60.000 2.18 0.00 0.00 5.73
4606 5029 1.508088 CCGCCATGTTGAAGAAGCC 59.492 57.895 0.00 0.00 0.00 4.35
4607 5030 1.153958 GCCGCCATGTTGAAGAAGC 60.154 57.895 0.00 0.00 0.00 3.86
4609 5032 0.326595 TAGGCCGCCATGTTGAAGAA 59.673 50.000 13.15 0.00 0.00 2.52
4612 5035 0.676466 CAGTAGGCCGCCATGTTGAA 60.676 55.000 13.15 0.00 0.00 2.69
4616 5039 3.402681 AGCAGTAGGCCGCCATGT 61.403 61.111 13.15 0.00 46.50 3.21
4624 5074 1.050988 TCCAGGGATCAGCAGTAGGC 61.051 60.000 0.00 0.00 45.30 3.93
4628 5078 2.362369 CCGTCCAGGGATCAGCAGT 61.362 63.158 0.00 0.00 35.97 4.40
4645 5095 2.825836 CATGCCTGAACGAGCCCC 60.826 66.667 0.00 0.00 0.00 5.80
4690 5140 1.680522 ATGCAGGAGGAGCACCGTAG 61.681 60.000 0.00 0.00 45.95 3.51
4693 5143 1.227380 GTATGCAGGAGGAGCACCG 60.227 63.158 0.00 0.00 45.95 4.94
4696 5146 0.538584 CACTGTATGCAGGAGGAGCA 59.461 55.000 15.65 0.00 46.62 4.26
4873 5323 1.002069 ATGGACCAGCAAGATCCCAA 58.998 50.000 0.00 0.00 0.00 4.12
4981 5434 0.320374 TGGTAAGTGAGTTCAGGGCG 59.680 55.000 0.00 0.00 0.00 6.13
5029 5482 1.295792 GCGAAGATGCACCGGAATAA 58.704 50.000 9.46 0.00 34.15 1.40
5030 5483 0.176910 TGCGAAGATGCACCGGAATA 59.823 50.000 9.46 0.00 40.62 1.75
5168 5622 3.318313 AGAAGAAGGGGTGAGTGAGAAA 58.682 45.455 0.00 0.00 0.00 2.52
5174 5628 1.344763 CACGAAGAAGAAGGGGTGAGT 59.655 52.381 0.00 0.00 0.00 3.41
5181 5635 3.321497 CAGAACCTCACGAAGAAGAAGG 58.679 50.000 0.00 0.00 0.00 3.46
5227 5681 2.638556 AAACGACGGACAGAGATCAG 57.361 50.000 0.00 0.00 0.00 2.90
5232 5686 2.427232 TGGTAAAACGACGGACAGAG 57.573 50.000 0.00 0.00 0.00 3.35
5379 5833 0.549950 CATGGCTTGAGGTGAGGGAT 59.450 55.000 0.00 0.00 0.00 3.85
5380 5834 1.993653 CATGGCTTGAGGTGAGGGA 59.006 57.895 0.00 0.00 0.00 4.20
5382 5836 0.395311 ATGCATGGCTTGAGGTGAGG 60.395 55.000 0.00 0.00 0.00 3.86
5383 5837 0.738975 CATGCATGGCTTGAGGTGAG 59.261 55.000 19.40 0.00 36.06 3.51
5725 6179 5.438761 AGCGCTGAAAATTTACAAAGAGT 57.561 34.783 10.39 0.00 0.00 3.24
5783 6237 8.470040 AATTCTTTATCATTGTCACATTGCAC 57.530 30.769 0.00 0.00 0.00 4.57
5799 6253 6.312399 TGCGAGTGTTGTCAAATTCTTTAT 57.688 33.333 0.00 0.00 0.00 1.40
5869 6323 4.094887 CCGTTTTGAGATGAAGTGTATGGG 59.905 45.833 0.00 0.00 0.00 4.00
5955 6409 0.247185 CCAAAAATGAGGCGGCATGT 59.753 50.000 13.08 0.00 0.00 3.21
6027 6481 2.356667 GGGAAGACTTGGGGCTGG 59.643 66.667 0.00 0.00 0.00 4.85
6034 6488 2.537401 GATTCGTACGGGGAAGACTTG 58.463 52.381 16.52 0.00 0.00 3.16
6039 6493 4.332428 AATAAGGATTCGTACGGGGAAG 57.668 45.455 16.52 0.00 0.00 3.46
6093 6547 2.037641 GGAAAACAGAGGCAGCCAAAAT 59.962 45.455 15.80 0.00 0.00 1.82
6134 6588 1.613630 GAGGGGAGAGCTTGTGGGA 60.614 63.158 0.00 0.00 0.00 4.37
6190 6644 1.873591 AGACAACGACATCCTTTGTGC 59.126 47.619 0.00 0.00 39.18 4.57
6310 6764 2.509964 GGGGTTGGAGGATGTAGTGATT 59.490 50.000 0.00 0.00 0.00 2.57
6490 6962 1.526917 GGATGCCATGGGAAGACGG 60.527 63.158 11.10 0.00 0.00 4.79
6494 6966 0.754217 CCAGTGGATGCCATGGGAAG 60.754 60.000 11.10 0.00 35.28 3.46
6531 7003 1.274703 GGTGGCAGGAGAATCTGGGA 61.275 60.000 0.00 0.00 35.43 4.37
6620 7095 0.328592 TCAGAGTGCGTAGGAGAGGT 59.671 55.000 0.00 0.00 0.00 3.85
6654 7129 3.576356 GCGGGATGTGTGGATGCG 61.576 66.667 0.00 0.00 0.00 4.73
6665 7140 1.074167 ATGGAGGAGAAGGCGGGAT 60.074 57.895 0.00 0.00 0.00 3.85
6682 7157 0.824759 GTGGCTGGGACGTAGAAGAT 59.175 55.000 0.00 0.00 0.00 2.40
6817 7292 2.472029 GGGGAGAGAGAAGTGGATGAA 58.528 52.381 0.00 0.00 0.00 2.57
6922 7400 3.023119 TGCAACAAGAGACCATGTGTTT 58.977 40.909 0.00 0.00 31.98 2.83
7140 7620 1.272147 GGTGAATGGGCCAAGAAGAGT 60.272 52.381 11.89 0.00 0.00 3.24
7646 8128 4.577693 GGAAAGTTTAGAACCCGTTTCAGT 59.422 41.667 0.00 0.00 36.57 3.41
7719 8201 3.177228 AGAGTCATGTACTGAAGGGCTT 58.823 45.455 3.01 0.00 39.07 4.35
7799 8281 9.952030 TTTAACATGATTGTAGTGAGGAATACA 57.048 29.630 0.00 0.00 34.06 2.29
7835 8317 5.623956 TCAAGAGTTCCTTTGAGGTAACA 57.376 39.130 10.03 0.00 36.53 2.41
7908 8390 0.961019 GCAAACCCAGTCTGCATCAA 59.039 50.000 0.00 0.00 36.09 2.57
7925 8407 1.379443 ACGAGTATCCGGACAGGCA 60.379 57.895 6.12 0.00 40.77 4.75
7927 8409 0.812811 TCGACGAGTATCCGGACAGG 60.813 60.000 6.12 0.00 42.97 4.00
7928 8410 1.194997 GATCGACGAGTATCCGGACAG 59.805 57.143 6.12 0.00 0.00 3.51
8023 8505 3.849002 TCAGCTTCAGCAGATGACC 57.151 52.632 0.75 0.00 43.25 4.02
8030 8512 2.477825 GAGCGATATTCAGCTTCAGCA 58.522 47.619 0.75 0.00 44.69 4.41
8075 8557 1.006102 AAGGTGACGAAGCCAGACG 60.006 57.895 0.00 0.00 0.00 4.18
8090 8572 2.103934 CGGAGCTCGCTGAGAAGG 59.896 66.667 7.83 0.00 0.00 3.46
8107 8589 2.203126 CTTGATGGAGAGGCCGGC 60.203 66.667 21.18 21.18 40.66 6.13
8135 8617 7.441836 ACACAGCGGAGATATTATCACAATAA 58.558 34.615 6.46 0.00 0.00 1.40
8151 8633 1.275010 ACATGACATGTACACAGCGGA 59.725 47.619 19.53 0.00 42.78 5.54
8152 8634 1.725641 ACATGACATGTACACAGCGG 58.274 50.000 19.53 0.00 42.78 5.52
8153 8635 3.062099 GGTTACATGACATGTACACAGCG 59.938 47.826 24.63 0.00 44.79 5.18
8159 8641 5.726397 TGTACAGGGTTACATGACATGTAC 58.274 41.667 24.63 18.86 44.79 2.90
8174 8656 0.736636 TACGACGATGCTGTACAGGG 59.263 55.000 23.95 1.01 0.00 4.45
8183 8665 5.268544 TCTATGTGTTTAGTACGACGATGC 58.731 41.667 0.00 0.00 0.00 3.91
8213 8695 5.805728 ACCTTCTCCCTAACAAAGTGTATG 58.194 41.667 0.00 0.00 0.00 2.39
8407 15614 2.581409 GTACGTGCACGGGGATCG 60.581 66.667 39.21 16.33 44.95 3.69
8408 15615 1.518572 CAGTACGTGCACGGGGATC 60.519 63.158 39.21 23.75 44.95 3.36
8409 15616 2.577059 CAGTACGTGCACGGGGAT 59.423 61.111 39.21 23.02 44.95 3.85
8443 15656 4.363217 AGGTGGGATTACATATAGGAGGGA 59.637 45.833 0.00 0.00 0.00 4.20
8465 15678 6.471233 TCCTTGATTCCATACAGAGTACAG 57.529 41.667 0.00 0.00 0.00 2.74
8479 15692 7.913674 ACTGATTGAGTACTTTCCTTGATTC 57.086 36.000 0.00 0.00 30.86 2.52
8506 15719 2.203728 TGGCCTCCACCTACGTGT 60.204 61.111 3.32 0.00 38.41 4.49
8538 15751 3.769739 TCACTCACACTGCATAACCTT 57.230 42.857 0.00 0.00 0.00 3.50
8578 15791 2.797156 CAGTTCAACCAGTGTCTTCTCG 59.203 50.000 0.00 0.00 0.00 4.04
8814 16027 0.960364 CTGCTTTCCTTAGCCGGCAA 60.960 55.000 31.54 19.28 40.49 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.