Multiple sequence alignment - TraesCS7D01G459100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G459100 chr7D 100.000 3398 0 0 1 3398 576605695 576609092 0.000000e+00 6276.0
1 TraesCS7D01G459100 chr7D 88.182 330 21 4 1 329 53643911 53643599 8.900000e-101 377.0
2 TraesCS7D01G459100 chr7D 74.660 588 118 26 1000 1574 601584155 601583586 7.330000e-57 231.0
3 TraesCS7D01G459100 chr7A 93.847 1609 83 11 1446 3047 667937529 667939128 0.000000e+00 2409.0
4 TraesCS7D01G459100 chr7A 95.197 229 10 1 3167 3395 667939520 667939747 8.960000e-96 361.0
5 TraesCS7D01G459100 chr7A 73.056 553 115 19 1049 1583 693800088 693800624 7.540000e-37 165.0
6 TraesCS7D01G459100 chr2D 86.536 1530 184 17 809 2332 640233271 640231758 0.000000e+00 1664.0
7 TraesCS7D01G459100 chr2D 74.520 1354 240 59 969 2293 33544525 33545802 3.050000e-135 492.0
8 TraesCS7D01G459100 chr2D 73.820 1356 252 60 969 2293 33340669 33341952 3.110000e-120 442.0
9 TraesCS7D01G459100 chr2D 79.825 456 76 10 1872 2322 32157852 32157408 5.470000e-83 318.0
10 TraesCS7D01G459100 chr2D 86.254 291 23 3 1 291 629245352 629245625 1.980000e-77 300.0
11 TraesCS7D01G459100 chr2D 85.217 115 11 5 505 615 640233476 640233364 2.770000e-21 113.0
12 TraesCS7D01G459100 chr2B 85.800 1500 201 10 835 2332 801177444 801178933 0.000000e+00 1580.0
13 TraesCS7D01G459100 chr2B 84.727 1100 153 13 1237 2332 801205939 801207027 0.000000e+00 1086.0
14 TraesCS7D01G459100 chr2B 82.883 222 23 5 10 231 801176829 801177035 5.790000e-43 185.0
15 TraesCS7D01G459100 chr2B 90.265 113 11 0 2471 2583 801178970 801179082 7.600000e-32 148.0
16 TraesCS7D01G459100 chr2B 90.265 113 11 0 2471 2583 801207064 801207176 7.600000e-32 148.0
17 TraesCS7D01G459100 chr1D 74.342 1329 262 45 969 2285 414568424 414567163 3.050000e-135 492.0
18 TraesCS7D01G459100 chr4A 73.630 1350 254 52 962 2279 601183356 601182077 8.710000e-116 427.0
19 TraesCS7D01G459100 chr6D 88.235 289 17 4 1 289 450502578 450502849 2.530000e-86 329.0
20 TraesCS7D01G459100 chr7B 73.101 632 129 26 969 1583 681619463 681620070 1.610000e-43 187.0
21 TraesCS7D01G459100 chr6A 90.476 126 11 1 433 557 470885017 470884892 7.540000e-37 165.0
22 TraesCS7D01G459100 chr3B 90.110 91 9 0 239 329 2895966 2896056 5.960000e-23 119.0
23 TraesCS7D01G459100 chr5A 86.301 73 10 0 862 934 165683020 165682948 2.810000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G459100 chr7D 576605695 576609092 3397 False 6276.000000 6276 100.0000 1 3398 1 chr7D.!!$F1 3397
1 TraesCS7D01G459100 chr7D 601583586 601584155 569 True 231.000000 231 74.6600 1000 1574 1 chr7D.!!$R2 574
2 TraesCS7D01G459100 chr7A 667937529 667939747 2218 False 1385.000000 2409 94.5220 1446 3395 2 chr7A.!!$F2 1949
3 TraesCS7D01G459100 chr2D 640231758 640233476 1718 True 888.500000 1664 85.8765 505 2332 2 chr2D.!!$R2 1827
4 TraesCS7D01G459100 chr2D 33544525 33545802 1277 False 492.000000 492 74.5200 969 2293 1 chr2D.!!$F2 1324
5 TraesCS7D01G459100 chr2D 33340669 33341952 1283 False 442.000000 442 73.8200 969 2293 1 chr2D.!!$F1 1324
6 TraesCS7D01G459100 chr2B 801176829 801179082 2253 False 637.666667 1580 86.3160 10 2583 3 chr2B.!!$F1 2573
7 TraesCS7D01G459100 chr2B 801205939 801207176 1237 False 617.000000 1086 87.4960 1237 2583 2 chr2B.!!$F2 1346
8 TraesCS7D01G459100 chr1D 414567163 414568424 1261 True 492.000000 492 74.3420 969 2285 1 chr1D.!!$R1 1316
9 TraesCS7D01G459100 chr4A 601182077 601183356 1279 True 427.000000 427 73.6300 962 2279 1 chr4A.!!$R1 1317

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
632 737 0.035056 CTTACTCCCCCTTGGCACTG 60.035 60.0 0.00 0.0 0.0 3.66 F
669 774 0.094730 GCTTAACGCCGACACACATC 59.905 55.0 0.00 0.0 0.0 3.06 F
672 777 0.108992 TAACGCCGACACACATCTCC 60.109 55.0 0.00 0.0 0.0 3.71 F
1687 1872 0.178990 GCACTGGTGTCCTTTTCCCT 60.179 55.0 2.64 0.0 0.0 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1606 1782 0.341961 TAGGACAGTGCCCCCAGTAT 59.658 55.0 0.00 0.00 0.00 2.12 R
1760 1945 0.745845 GTCAGGAGTGCGCATCCATT 60.746 55.0 28.69 14.57 39.47 3.16 R
2155 2346 1.117150 TGGGGAGTAAGCGACATACC 58.883 55.0 0.00 0.00 0.00 2.73 R
3033 3244 0.112412 GGGAAAAAGCACTCCCTCCA 59.888 55.0 0.00 0.00 46.91 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.582937 CGCACAGCCTACGTACTCG 60.583 63.158 0.00 0.00 43.34 4.18
27 28 1.798735 GCACAGCCTACGTACTCGA 59.201 57.895 0.00 0.00 40.62 4.04
28 29 0.522915 GCACAGCCTACGTACTCGAC 60.523 60.000 0.00 0.00 40.62 4.20
48 49 2.125753 CAGCAGCTCTGTCCCGAC 60.126 66.667 0.00 0.00 38.02 4.79
90 91 2.434359 CGCCTGACTTCCGGGTTC 60.434 66.667 0.00 0.00 43.53 3.62
91 92 2.046217 GCCTGACTTCCGGGTTCC 60.046 66.667 0.00 0.00 43.53 3.62
125 126 0.767446 CTCCTGCCATCCTCCCTGAT 60.767 60.000 0.00 0.00 0.00 2.90
127 128 1.759881 CTGCCATCCTCCCTGATCC 59.240 63.158 0.00 0.00 0.00 3.36
157 158 4.214327 CGCCTCTCCCCGAGCTTC 62.214 72.222 0.00 0.00 38.49 3.86
164 165 3.458163 CCCCGAGCTTCGCAGGTA 61.458 66.667 0.00 0.00 38.82 3.08
165 166 2.105128 CCCGAGCTTCGCAGGTAG 59.895 66.667 0.00 0.00 38.82 3.18
167 168 1.226717 CCGAGCTTCGCAGGTAGAC 60.227 63.158 0.00 0.00 38.82 2.59
170 171 2.886124 GCTTCGCAGGTAGACGCC 60.886 66.667 0.00 0.00 0.00 5.68
172 173 4.789075 TTCGCAGGTAGACGCCGC 62.789 66.667 0.00 0.00 0.00 6.53
176 177 4.514577 CAGGTAGACGCCGCCTGG 62.515 72.222 7.32 0.00 44.36 4.45
193 194 2.143419 GGCATCCCCATCGTCTCCT 61.143 63.158 0.00 0.00 0.00 3.69
194 195 1.369321 GCATCCCCATCGTCTCCTC 59.631 63.158 0.00 0.00 0.00 3.71
195 196 1.662608 CATCCCCATCGTCTCCTCG 59.337 63.158 0.00 0.00 0.00 4.63
196 197 0.823769 CATCCCCATCGTCTCCTCGA 60.824 60.000 0.00 0.00 43.86 4.04
197 198 0.538516 ATCCCCATCGTCTCCTCGAG 60.539 60.000 5.13 5.13 43.00 4.04
198 199 2.725008 CCCATCGTCTCCTCGAGC 59.275 66.667 6.99 0.00 43.00 5.03
199 200 1.826054 CCCATCGTCTCCTCGAGCT 60.826 63.158 6.99 0.00 43.00 4.09
200 201 1.652012 CCATCGTCTCCTCGAGCTC 59.348 63.158 6.99 2.73 43.00 4.09
201 202 1.098129 CCATCGTCTCCTCGAGCTCA 61.098 60.000 15.40 0.00 43.00 4.26
231 232 2.096496 CCAGCTGTTCGATTCATTGACC 59.904 50.000 13.81 0.00 0.00 4.02
232 233 2.096496 CAGCTGTTCGATTCATTGACCC 59.904 50.000 5.25 0.00 0.00 4.46
233 234 2.083774 GCTGTTCGATTCATTGACCCA 58.916 47.619 0.00 0.00 0.00 4.51
237 238 1.732941 TCGATTCATTGACCCAACGG 58.267 50.000 0.00 0.00 0.00 4.44
238 239 1.276705 TCGATTCATTGACCCAACGGA 59.723 47.619 0.00 0.00 0.00 4.69
239 240 2.093181 TCGATTCATTGACCCAACGGAT 60.093 45.455 0.00 0.00 0.00 4.18
240 241 2.032054 CGATTCATTGACCCAACGGATG 59.968 50.000 0.00 0.00 0.00 3.51
241 242 2.577606 TTCATTGACCCAACGGATGT 57.422 45.000 0.00 0.00 0.00 3.06
242 243 2.577606 TCATTGACCCAACGGATGTT 57.422 45.000 0.00 0.00 39.43 2.71
243 244 2.870175 TCATTGACCCAACGGATGTTT 58.130 42.857 0.00 0.00 35.72 2.83
244 245 3.226777 TCATTGACCCAACGGATGTTTT 58.773 40.909 0.00 0.00 35.72 2.43
245 246 4.399219 TCATTGACCCAACGGATGTTTTA 58.601 39.130 0.00 0.00 35.72 1.52
246 247 4.457603 TCATTGACCCAACGGATGTTTTAG 59.542 41.667 0.00 0.00 35.72 1.85
247 248 2.156098 TGACCCAACGGATGTTTTAGC 58.844 47.619 0.00 0.00 35.72 3.09
248 249 2.156098 GACCCAACGGATGTTTTAGCA 58.844 47.619 0.00 0.00 35.72 3.49
249 250 2.752903 GACCCAACGGATGTTTTAGCAT 59.247 45.455 0.00 0.00 35.72 3.79
250 251 3.161866 ACCCAACGGATGTTTTAGCATT 58.838 40.909 0.00 0.00 35.72 3.56
251 252 3.576550 ACCCAACGGATGTTTTAGCATTT 59.423 39.130 0.00 0.00 35.72 2.32
252 253 4.173256 CCCAACGGATGTTTTAGCATTTC 58.827 43.478 0.00 0.00 35.72 2.17
253 254 3.851403 CCAACGGATGTTTTAGCATTTCG 59.149 43.478 0.00 0.00 35.72 3.46
254 255 4.472286 CAACGGATGTTTTAGCATTTCGT 58.528 39.130 0.00 0.00 39.08 3.85
255 256 4.078363 ACGGATGTTTTAGCATTTCGTG 57.922 40.909 7.60 0.00 37.51 4.35
256 257 3.119990 ACGGATGTTTTAGCATTTCGTGG 60.120 43.478 7.60 0.00 37.51 4.94
257 258 3.179048 GGATGTTTTAGCATTTCGTGGC 58.821 45.455 0.00 0.00 0.00 5.01
265 266 1.970917 GCATTTCGTGGCCGAGAGTG 61.971 60.000 0.00 4.52 45.24 3.51
272 273 3.426568 GGCCGAGAGTGCTGTTGC 61.427 66.667 0.00 0.00 40.20 4.17
290 291 3.552132 TGCGAAATGGCCTAACAGATA 57.448 42.857 3.32 0.00 0.00 1.98
299 302 3.142174 GGCCTAACAGATAGATGTTGCC 58.858 50.000 0.00 4.17 43.14 4.52
301 304 3.561725 GCCTAACAGATAGATGTTGCCAC 59.438 47.826 2.48 0.00 43.14 5.01
302 305 4.769688 CCTAACAGATAGATGTTGCCACA 58.230 43.478 0.00 0.00 43.14 4.17
303 306 4.813161 CCTAACAGATAGATGTTGCCACAG 59.187 45.833 0.00 0.00 43.14 3.66
307 310 5.121811 ACAGATAGATGTTGCCACAGAATC 58.878 41.667 0.00 0.05 35.94 2.52
313 316 1.234821 GTTGCCACAGAATCGAACCA 58.765 50.000 0.00 0.00 0.00 3.67
315 318 1.452110 TGCCACAGAATCGAACCATG 58.548 50.000 0.00 0.00 0.00 3.66
316 319 0.734889 GCCACAGAATCGAACCATGG 59.265 55.000 11.19 11.19 0.00 3.66
318 321 1.739466 CCACAGAATCGAACCATGGTG 59.261 52.381 20.60 7.07 0.00 4.17
319 322 2.426522 CACAGAATCGAACCATGGTGT 58.573 47.619 20.60 8.80 0.00 4.16
320 323 2.160219 CACAGAATCGAACCATGGTGTG 59.840 50.000 20.60 15.33 0.00 3.82
322 325 3.273434 CAGAATCGAACCATGGTGTGAT 58.727 45.455 20.60 20.79 0.00 3.06
324 327 4.156556 CAGAATCGAACCATGGTGTGATTT 59.843 41.667 30.60 22.00 34.85 2.17
325 328 4.156556 AGAATCGAACCATGGTGTGATTTG 59.843 41.667 30.60 16.76 34.85 2.32
326 329 2.857483 TCGAACCATGGTGTGATTTGT 58.143 42.857 20.60 0.00 0.00 2.83
327 330 2.551887 TCGAACCATGGTGTGATTTGTG 59.448 45.455 20.60 0.89 0.00 3.33
329 332 3.641648 GAACCATGGTGTGATTTGTGTG 58.358 45.455 20.60 0.00 0.00 3.82
330 333 2.665165 ACCATGGTGTGATTTGTGTGT 58.335 42.857 18.99 0.00 0.00 3.72
331 334 2.361757 ACCATGGTGTGATTTGTGTGTG 59.638 45.455 18.99 0.00 0.00 3.82
336 339 3.119673 TGGTGTGATTTGTGTGTGTGTTC 60.120 43.478 0.00 0.00 0.00 3.18
338 341 4.342772 GTGTGATTTGTGTGTGTGTTCTC 58.657 43.478 0.00 0.00 0.00 2.87
339 342 4.006319 TGTGATTTGTGTGTGTGTTCTCA 58.994 39.130 0.00 0.00 0.00 3.27
340 343 4.457257 TGTGATTTGTGTGTGTGTTCTCAA 59.543 37.500 0.00 0.00 0.00 3.02
341 344 5.048434 TGTGATTTGTGTGTGTGTTCTCAAA 60.048 36.000 0.00 0.00 33.69 2.69
342 345 6.035843 GTGATTTGTGTGTGTGTTCTCAAAT 58.964 36.000 0.00 0.00 39.08 2.32
343 346 6.020440 GTGATTTGTGTGTGTGTTCTCAAATG 60.020 38.462 0.00 0.00 37.65 2.32
344 347 5.635417 TTTGTGTGTGTGTTCTCAAATGA 57.365 34.783 0.00 0.00 0.00 2.57
345 348 5.635417 TTGTGTGTGTGTTCTCAAATGAA 57.365 34.783 0.00 0.00 0.00 2.57
346 349 4.980590 TGTGTGTGTGTTCTCAAATGAAC 58.019 39.130 0.00 0.00 44.60 3.18
347 350 4.142491 TGTGTGTGTGTTCTCAAATGAACC 60.142 41.667 5.15 0.00 43.96 3.62
348 351 4.013050 TGTGTGTGTTCTCAAATGAACCA 58.987 39.130 5.15 1.20 43.96 3.67
366 369 5.872070 TGAACCATGGTTTGTTCTGTTTTTC 59.128 36.000 30.33 13.75 41.10 2.29
374 377 6.155393 TGGTTTGTTCTGTTTTTCCCTGTATT 59.845 34.615 0.00 0.00 0.00 1.89
375 378 6.478673 GGTTTGTTCTGTTTTTCCCTGTATTG 59.521 38.462 0.00 0.00 0.00 1.90
379 387 7.038659 TGTTCTGTTTTTCCCTGTATTGTTTG 58.961 34.615 0.00 0.00 0.00 2.93
386 394 6.783708 TTTCCCTGTATTGTTTGTTCTTGT 57.216 33.333 0.00 0.00 0.00 3.16
391 399 9.747898 TCCCTGTATTGTTTGTTCTTGTATAAT 57.252 29.630 0.00 0.00 0.00 1.28
402 410 6.409704 TGTTCTTGTATAATCTGCTCTTGCT 58.590 36.000 0.00 0.00 40.48 3.91
403 411 6.314648 TGTTCTTGTATAATCTGCTCTTGCTG 59.685 38.462 0.00 0.00 40.48 4.41
404 412 4.813161 TCTTGTATAATCTGCTCTTGCTGC 59.187 41.667 0.00 0.00 40.48 5.25
405 413 4.412796 TGTATAATCTGCTCTTGCTGCT 57.587 40.909 0.00 0.00 40.48 4.24
406 414 4.774124 TGTATAATCTGCTCTTGCTGCTT 58.226 39.130 0.00 0.00 40.48 3.91
407 415 4.813161 TGTATAATCTGCTCTTGCTGCTTC 59.187 41.667 0.00 0.00 40.48 3.86
408 416 2.195741 AATCTGCTCTTGCTGCTTCA 57.804 45.000 0.00 0.00 40.48 3.02
409 417 2.195741 ATCTGCTCTTGCTGCTTCAA 57.804 45.000 0.00 0.00 40.48 2.69
410 418 2.195741 TCTGCTCTTGCTGCTTCAAT 57.804 45.000 0.00 0.00 40.48 2.57
411 419 3.339253 TCTGCTCTTGCTGCTTCAATA 57.661 42.857 0.00 0.00 40.48 1.90
412 420 3.882444 TCTGCTCTTGCTGCTTCAATAT 58.118 40.909 0.00 0.00 40.48 1.28
413 421 4.267536 TCTGCTCTTGCTGCTTCAATATT 58.732 39.130 0.00 0.00 40.48 1.28
414 422 4.334759 TCTGCTCTTGCTGCTTCAATATTC 59.665 41.667 0.00 0.00 40.48 1.75
415 423 4.267536 TGCTCTTGCTGCTTCAATATTCT 58.732 39.130 0.00 0.00 40.48 2.40
416 424 4.334759 TGCTCTTGCTGCTTCAATATTCTC 59.665 41.667 0.00 0.00 40.48 2.87
417 425 4.575645 GCTCTTGCTGCTTCAATATTCTCT 59.424 41.667 0.00 0.00 36.03 3.10
418 426 5.066246 GCTCTTGCTGCTTCAATATTCTCTT 59.934 40.000 0.00 0.00 36.03 2.85
419 427 6.674694 TCTTGCTGCTTCAATATTCTCTTC 57.325 37.500 0.00 0.00 0.00 2.87
420 428 6.413052 TCTTGCTGCTTCAATATTCTCTTCT 58.587 36.000 0.00 0.00 0.00 2.85
421 429 6.883217 TCTTGCTGCTTCAATATTCTCTTCTT 59.117 34.615 0.00 0.00 0.00 2.52
422 430 6.432607 TGCTGCTTCAATATTCTCTTCTTG 57.567 37.500 0.00 0.00 0.00 3.02
423 431 5.942236 TGCTGCTTCAATATTCTCTTCTTGT 59.058 36.000 0.00 0.00 0.00 3.16
424 432 7.105588 TGCTGCTTCAATATTCTCTTCTTGTA 58.894 34.615 0.00 0.00 0.00 2.41
425 433 7.772292 TGCTGCTTCAATATTCTCTTCTTGTAT 59.228 33.333 0.00 0.00 0.00 2.29
426 434 9.265901 GCTGCTTCAATATTCTCTTCTTGTATA 57.734 33.333 0.00 0.00 0.00 1.47
452 460 7.238486 ACAGTCTTCTCTGTAATGATTCAGT 57.762 36.000 0.00 0.00 45.31 3.41
453 461 7.675062 ACAGTCTTCTCTGTAATGATTCAGTT 58.325 34.615 0.00 0.00 45.31 3.16
454 462 7.816995 ACAGTCTTCTCTGTAATGATTCAGTTC 59.183 37.037 0.00 0.00 45.31 3.01
455 463 8.034215 CAGTCTTCTCTGTAATGATTCAGTTCT 58.966 37.037 0.00 0.00 33.89 3.01
456 464 8.592809 AGTCTTCTCTGTAATGATTCAGTTCTT 58.407 33.333 0.00 0.00 33.89 2.52
457 465 8.655092 GTCTTCTCTGTAATGATTCAGTTCTTG 58.345 37.037 0.00 0.00 33.89 3.02
458 466 6.974932 TCTCTGTAATGATTCAGTTCTTGC 57.025 37.500 0.00 0.00 33.89 4.01
459 467 6.705302 TCTCTGTAATGATTCAGTTCTTGCT 58.295 36.000 0.00 0.00 33.89 3.91
460 468 7.164122 TCTCTGTAATGATTCAGTTCTTGCTT 58.836 34.615 0.00 0.00 33.89 3.91
461 469 7.332926 TCTCTGTAATGATTCAGTTCTTGCTTC 59.667 37.037 0.00 0.00 33.89 3.86
462 470 6.372659 TCTGTAATGATTCAGTTCTTGCTTCC 59.627 38.462 0.00 0.00 33.89 3.46
463 471 6.003326 TGTAATGATTCAGTTCTTGCTTCCA 58.997 36.000 0.00 0.00 0.00 3.53
464 472 6.660521 TGTAATGATTCAGTTCTTGCTTCCAT 59.339 34.615 0.00 0.00 0.00 3.41
465 473 7.828717 TGTAATGATTCAGTTCTTGCTTCCATA 59.171 33.333 0.00 0.00 0.00 2.74
466 474 7.893124 AATGATTCAGTTCTTGCTTCCATAT 57.107 32.000 0.00 0.00 0.00 1.78
467 475 8.985315 AATGATTCAGTTCTTGCTTCCATATA 57.015 30.769 0.00 0.00 0.00 0.86
468 476 8.985315 ATGATTCAGTTCTTGCTTCCATATAA 57.015 30.769 0.00 0.00 0.00 0.98
469 477 8.985315 TGATTCAGTTCTTGCTTCCATATAAT 57.015 30.769 0.00 0.00 0.00 1.28
470 478 9.060347 TGATTCAGTTCTTGCTTCCATATAATC 57.940 33.333 0.00 0.00 0.00 1.75
471 479 9.282569 GATTCAGTTCTTGCTTCCATATAATCT 57.717 33.333 0.00 0.00 0.00 2.40
509 546 7.620880 TCTTCTTGTATAACCTGCTGTGTAAT 58.379 34.615 0.00 0.00 0.00 1.89
510 547 7.549134 TCTTCTTGTATAACCTGCTGTGTAATG 59.451 37.037 0.00 0.00 0.00 1.90
511 548 6.941857 TCTTGTATAACCTGCTGTGTAATGA 58.058 36.000 0.00 0.00 0.00 2.57
527 564 6.072508 TGTGTAATGATTCAGTTTCTGCTTCC 60.073 38.462 0.00 0.00 0.00 3.46
531 568 7.893124 AATGATTCAGTTTCTGCTTCCATAT 57.107 32.000 0.00 0.00 0.00 1.78
539 576 5.649831 AGTTTCTGCTTCCATATTCTGTTCC 59.350 40.000 0.00 0.00 0.00 3.62
540 577 5.441718 TTCTGCTTCCATATTCTGTTCCT 57.558 39.130 0.00 0.00 0.00 3.36
557 598 7.847096 TCTGTTCCTGTATAATTTGCTCTGTA 58.153 34.615 0.00 0.00 0.00 2.74
573 615 6.437928 TGCTCTGTAATGATTTGTTGTTGTC 58.562 36.000 0.00 0.00 0.00 3.18
594 636 2.684881 CAAAAGTTGCAGTCTGGAGTGT 59.315 45.455 1.14 0.00 34.32 3.55
598 640 0.394192 TTGCAGTCTGGAGTGTCCTG 59.606 55.000 1.14 0.00 37.46 3.86
604 646 0.105194 TCTGGAGTGTCCTGGGTTCA 60.105 55.000 0.00 0.00 37.46 3.18
632 737 0.035056 CTTACTCCCCCTTGGCACTG 60.035 60.000 0.00 0.00 0.00 3.66
633 738 0.474854 TTACTCCCCCTTGGCACTGA 60.475 55.000 0.00 0.00 0.00 3.41
634 739 0.474854 TACTCCCCCTTGGCACTGAA 60.475 55.000 0.00 0.00 0.00 3.02
635 740 1.303643 CTCCCCCTTGGCACTGAAC 60.304 63.158 0.00 0.00 0.00 3.18
636 741 2.283173 CCCCCTTGGCACTGAACC 60.283 66.667 0.00 0.00 0.00 3.62
637 742 2.672996 CCCCTTGGCACTGAACCG 60.673 66.667 0.00 0.00 0.00 4.44
638 743 2.429930 CCCTTGGCACTGAACCGA 59.570 61.111 0.00 0.00 0.00 4.69
639 744 1.672356 CCCTTGGCACTGAACCGAG 60.672 63.158 0.00 0.00 38.30 4.63
640 745 1.071471 CCTTGGCACTGAACCGAGT 59.929 57.895 0.00 0.00 37.03 4.18
641 746 0.535102 CCTTGGCACTGAACCGAGTT 60.535 55.000 0.00 0.00 37.03 3.01
642 747 0.588252 CTTGGCACTGAACCGAGTTG 59.412 55.000 0.00 0.00 34.42 3.16
643 748 1.444119 TTGGCACTGAACCGAGTTGC 61.444 55.000 0.00 0.00 0.00 4.17
644 749 1.598130 GGCACTGAACCGAGTTGCT 60.598 57.895 0.00 0.00 0.00 3.91
645 750 1.571460 GCACTGAACCGAGTTGCTG 59.429 57.895 0.00 0.00 0.00 4.41
646 751 1.160329 GCACTGAACCGAGTTGCTGT 61.160 55.000 0.00 0.00 0.00 4.40
647 752 1.299541 CACTGAACCGAGTTGCTGTT 58.700 50.000 0.00 0.00 0.00 3.16
648 753 1.261619 CACTGAACCGAGTTGCTGTTC 59.738 52.381 0.00 0.00 40.07 3.18
649 754 0.868406 CTGAACCGAGTTGCTGTTCC 59.132 55.000 0.00 0.00 39.23 3.62
650 755 0.878523 TGAACCGAGTTGCTGTTCCG 60.879 55.000 0.00 0.00 39.23 4.30
651 756 2.171489 GAACCGAGTTGCTGTTCCGC 62.171 60.000 0.00 0.00 35.45 5.54
652 757 2.357517 CCGAGTTGCTGTTCCGCT 60.358 61.111 0.00 0.00 0.00 5.52
653 758 1.961277 CCGAGTTGCTGTTCCGCTT 60.961 57.895 0.00 0.00 0.00 4.68
654 759 0.669318 CCGAGTTGCTGTTCCGCTTA 60.669 55.000 0.00 0.00 0.00 3.09
655 760 1.144969 CGAGTTGCTGTTCCGCTTAA 58.855 50.000 0.00 0.00 0.00 1.85
656 761 1.136336 CGAGTTGCTGTTCCGCTTAAC 60.136 52.381 0.00 0.00 0.00 2.01
657 762 0.865769 AGTTGCTGTTCCGCTTAACG 59.134 50.000 0.00 0.00 43.15 3.18
658 763 0.724785 GTTGCTGTTCCGCTTAACGC 60.725 55.000 0.00 0.00 41.76 4.84
659 764 1.847890 TTGCTGTTCCGCTTAACGCC 61.848 55.000 10.11 0.00 41.76 5.68
660 765 2.776072 CTGTTCCGCTTAACGCCG 59.224 61.111 0.00 0.00 41.76 6.46
661 766 1.735198 CTGTTCCGCTTAACGCCGA 60.735 57.895 0.00 0.00 41.76 5.54
662 767 1.952266 CTGTTCCGCTTAACGCCGAC 61.952 60.000 0.00 0.00 41.76 4.79
663 768 2.023223 GTTCCGCTTAACGCCGACA 61.023 57.895 0.00 0.00 41.76 4.35
664 769 2.023223 TTCCGCTTAACGCCGACAC 61.023 57.895 0.00 0.00 41.76 3.67
665 770 2.696409 TTCCGCTTAACGCCGACACA 62.696 55.000 0.00 0.00 41.76 3.72
666 771 2.468532 CGCTTAACGCCGACACAC 59.531 61.111 0.00 0.00 34.21 3.82
667 772 2.304401 CGCTTAACGCCGACACACA 61.304 57.895 0.00 0.00 34.21 3.72
668 773 1.623081 CGCTTAACGCCGACACACAT 61.623 55.000 0.00 0.00 34.21 3.21
669 774 0.094730 GCTTAACGCCGACACACATC 59.905 55.000 0.00 0.00 0.00 3.06
670 775 1.710013 CTTAACGCCGACACACATCT 58.290 50.000 0.00 0.00 0.00 2.90
671 776 1.654105 CTTAACGCCGACACACATCTC 59.346 52.381 0.00 0.00 0.00 2.75
672 777 0.108992 TAACGCCGACACACATCTCC 60.109 55.000 0.00 0.00 0.00 3.71
673 778 2.880879 CGCCGACACACATCTCCG 60.881 66.667 0.00 0.00 0.00 4.63
674 779 3.188786 GCCGACACACATCTCCGC 61.189 66.667 0.00 0.00 0.00 5.54
675 780 2.509336 CCGACACACATCTCCGCC 60.509 66.667 0.00 0.00 0.00 6.13
676 781 2.880879 CGACACACATCTCCGCCG 60.881 66.667 0.00 0.00 0.00 6.46
677 782 3.188786 GACACACATCTCCGCCGC 61.189 66.667 0.00 0.00 0.00 6.53
678 783 4.760047 ACACACATCTCCGCCGCC 62.760 66.667 0.00 0.00 0.00 6.13
697 802 2.052782 CCCCCTTCTTAATTCCACGG 57.947 55.000 0.00 0.00 0.00 4.94
698 803 1.409661 CCCCCTTCTTAATTCCACGGG 60.410 57.143 0.00 0.00 0.00 5.28
699 804 1.562475 CCCCTTCTTAATTCCACGGGA 59.438 52.381 0.00 0.00 31.85 5.14
700 805 2.421529 CCCCTTCTTAATTCCACGGGAG 60.422 54.545 0.00 0.00 31.21 4.30
701 806 2.289565 CCTTCTTAATTCCACGGGAGC 58.710 52.381 0.00 0.00 31.21 4.70
702 807 2.355716 CCTTCTTAATTCCACGGGAGCA 60.356 50.000 0.00 0.00 31.21 4.26
703 808 2.396590 TCTTAATTCCACGGGAGCAC 57.603 50.000 0.00 0.00 31.21 4.40
704 809 1.006832 CTTAATTCCACGGGAGCACG 58.993 55.000 0.00 0.00 40.31 5.34
705 810 1.022451 TTAATTCCACGGGAGCACGC 61.022 55.000 0.00 0.00 37.37 5.34
706 811 2.862674 TAATTCCACGGGAGCACGCC 62.863 60.000 0.00 0.00 37.37 5.68
724 829 4.360405 GGGGCGCCTTCTTCCCAA 62.360 66.667 28.56 0.00 41.85 4.12
725 830 2.282887 GGGCGCCTTCTTCCCAAA 60.283 61.111 28.56 0.00 39.82 3.28
726 831 2.636412 GGGCGCCTTCTTCCCAAAC 61.636 63.158 28.56 0.00 39.82 2.93
727 832 2.561373 GCGCCTTCTTCCCAAACG 59.439 61.111 0.00 0.00 0.00 3.60
728 833 2.561373 CGCCTTCTTCCCAAACGC 59.439 61.111 0.00 0.00 0.00 4.84
729 834 2.258013 CGCCTTCTTCCCAAACGCA 61.258 57.895 0.00 0.00 0.00 5.24
730 835 1.581447 GCCTTCTTCCCAAACGCAG 59.419 57.895 0.00 0.00 0.00 5.18
731 836 1.866853 GCCTTCTTCCCAAACGCAGG 61.867 60.000 0.00 0.00 0.00 4.85
732 837 0.537371 CCTTCTTCCCAAACGCAGGT 60.537 55.000 0.00 0.00 0.00 4.00
733 838 0.593128 CTTCTTCCCAAACGCAGGTG 59.407 55.000 0.00 0.00 0.00 4.00
734 839 0.181587 TTCTTCCCAAACGCAGGTGA 59.818 50.000 0.00 0.00 0.00 4.02
735 840 0.250295 TCTTCCCAAACGCAGGTGAG 60.250 55.000 0.00 0.00 0.00 3.51
736 841 1.856265 CTTCCCAAACGCAGGTGAGC 61.856 60.000 0.00 0.00 0.00 4.26
737 842 2.594303 CCCAAACGCAGGTGAGCA 60.594 61.111 0.00 0.00 0.00 4.26
738 843 2.620112 CCCAAACGCAGGTGAGCAG 61.620 63.158 0.00 0.00 0.00 4.24
739 844 2.253452 CAAACGCAGGTGAGCAGC 59.747 61.111 0.00 0.00 0.00 5.25
740 845 2.111878 AAACGCAGGTGAGCAGCT 59.888 55.556 0.00 0.00 40.20 4.24
741 846 1.963338 AAACGCAGGTGAGCAGCTC 60.963 57.895 16.21 16.21 36.98 4.09
742 847 4.731612 ACGCAGGTGAGCAGCTCG 62.732 66.667 17.81 7.63 36.98 5.03
763 868 2.520741 CCCAAACTGGCCGTGGTT 60.521 61.111 12.16 7.98 35.79 3.67
764 869 2.131067 CCCAAACTGGCCGTGGTTT 61.131 57.895 13.24 13.24 35.79 3.27
765 870 1.067250 CCAAACTGGCCGTGGTTTG 59.933 57.895 27.31 27.31 46.63 2.93
766 871 1.671901 CCAAACTGGCCGTGGTTTGT 61.672 55.000 29.48 9.77 46.04 2.83
767 872 0.248866 CAAACTGGCCGTGGTTTGTC 60.249 55.000 26.56 0.00 43.92 3.18
768 873 0.395173 AAACTGGCCGTGGTTTGTCT 60.395 50.000 16.76 0.00 34.83 3.41
769 874 1.101049 AACTGGCCGTGGTTTGTCTG 61.101 55.000 0.00 0.00 0.00 3.51
770 875 2.904866 TGGCCGTGGTTTGTCTGC 60.905 61.111 0.00 0.00 0.00 4.26
771 876 2.904866 GGCCGTGGTTTGTCTGCA 60.905 61.111 0.00 0.00 0.00 4.41
772 877 2.485795 GGCCGTGGTTTGTCTGCAA 61.486 57.895 0.00 0.00 0.00 4.08
773 878 1.435515 GCCGTGGTTTGTCTGCAAA 59.564 52.632 0.00 0.00 41.77 3.68
774 879 0.179124 GCCGTGGTTTGTCTGCAAAA 60.179 50.000 0.00 0.00 45.01 2.44
775 880 1.737363 GCCGTGGTTTGTCTGCAAAAA 60.737 47.619 0.00 0.00 45.01 1.94
776 881 2.820330 CCGTGGTTTGTCTGCAAAAAT 58.180 42.857 0.00 0.00 45.01 1.82
777 882 2.794350 CCGTGGTTTGTCTGCAAAAATC 59.206 45.455 0.00 0.00 45.01 2.17
778 883 3.490761 CCGTGGTTTGTCTGCAAAAATCT 60.491 43.478 0.00 0.00 45.01 2.40
779 884 3.486841 CGTGGTTTGTCTGCAAAAATCTG 59.513 43.478 0.00 0.00 45.01 2.90
780 885 4.681744 GTGGTTTGTCTGCAAAAATCTGA 58.318 39.130 0.00 0.00 45.01 3.27
781 886 4.504097 GTGGTTTGTCTGCAAAAATCTGAC 59.496 41.667 0.00 0.00 45.01 3.51
782 887 4.051237 GGTTTGTCTGCAAAAATCTGACC 58.949 43.478 0.00 0.00 45.01 4.02
783 888 4.202151 GGTTTGTCTGCAAAAATCTGACCT 60.202 41.667 0.00 0.00 45.01 3.85
784 889 5.351458 GTTTGTCTGCAAAAATCTGACCTT 58.649 37.500 0.00 0.00 45.01 3.50
785 890 4.572985 TGTCTGCAAAAATCTGACCTTG 57.427 40.909 0.00 0.00 33.29 3.61
786 891 3.318839 TGTCTGCAAAAATCTGACCTTGG 59.681 43.478 0.00 0.00 33.29 3.61
787 892 3.319122 GTCTGCAAAAATCTGACCTTGGT 59.681 43.478 0.00 0.00 0.00 3.67
788 893 3.318839 TCTGCAAAAATCTGACCTTGGTG 59.681 43.478 0.00 0.00 0.00 4.17
789 894 2.224018 TGCAAAAATCTGACCTTGGTGC 60.224 45.455 0.00 0.00 0.00 5.01
790 895 2.036346 GCAAAAATCTGACCTTGGTGCT 59.964 45.455 0.00 0.00 0.00 4.40
791 896 3.858503 GCAAAAATCTGACCTTGGTGCTC 60.859 47.826 0.00 0.00 0.00 4.26
792 897 2.957402 AAATCTGACCTTGGTGCTCA 57.043 45.000 0.00 0.00 0.00 4.26
793 898 2.957402 AATCTGACCTTGGTGCTCAA 57.043 45.000 0.00 0.00 0.00 3.02
801 906 1.602311 CTTGGTGCTCAAGTCTTGCT 58.398 50.000 7.78 0.00 45.81 3.91
802 907 1.952296 CTTGGTGCTCAAGTCTTGCTT 59.048 47.619 7.78 0.00 45.81 3.91
816 921 6.787085 AGTCTTGCTTGTATTTGTGTCTAC 57.213 37.500 0.00 0.00 0.00 2.59
817 922 6.525629 AGTCTTGCTTGTATTTGTGTCTACT 58.474 36.000 0.00 0.00 0.00 2.57
818 923 6.425114 AGTCTTGCTTGTATTTGTGTCTACTG 59.575 38.462 0.00 0.00 0.00 2.74
819 924 6.202954 GTCTTGCTTGTATTTGTGTCTACTGT 59.797 38.462 0.00 0.00 0.00 3.55
820 925 6.423905 TCTTGCTTGTATTTGTGTCTACTGTC 59.576 38.462 0.00 0.00 0.00 3.51
821 926 5.853936 TGCTTGTATTTGTGTCTACTGTCT 58.146 37.500 0.00 0.00 0.00 3.41
822 927 6.988522 TGCTTGTATTTGTGTCTACTGTCTA 58.011 36.000 0.00 0.00 0.00 2.59
823 928 6.866770 TGCTTGTATTTGTGTCTACTGTCTAC 59.133 38.462 0.00 0.00 0.00 2.59
824 929 6.866770 GCTTGTATTTGTGTCTACTGTCTACA 59.133 38.462 0.00 0.00 0.00 2.74
842 986 1.238439 CAGCCACATTTCTCACCGTT 58.762 50.000 0.00 0.00 0.00 4.44
845 989 1.336755 GCCACATTTCTCACCGTTGTT 59.663 47.619 0.00 0.00 0.00 2.83
867 1011 1.072159 GGAACCTGCTGCTCTGTGT 59.928 57.895 0.00 0.00 0.00 3.72
874 1018 1.958205 GCTGCTCTGTGTGTTCGCT 60.958 57.895 0.00 0.00 0.00 4.93
880 1024 1.939934 CTCTGTGTGTTCGCTTTCCAA 59.060 47.619 0.00 0.00 0.00 3.53
910 1054 6.381801 ACATGTATGTGCTTTTCTTACTTGC 58.618 36.000 0.00 0.00 40.03 4.01
949 1093 2.290641 GGTCGCCGAAGCAATTCAATAT 59.709 45.455 0.00 0.00 39.83 1.28
985 1129 3.823281 TTGTTTAGTTGACCGGACTCA 57.177 42.857 9.46 0.00 0.00 3.41
1016 1160 2.060383 CCATGCCGGACAGGAGAGA 61.060 63.158 5.05 0.00 45.00 3.10
1067 1211 8.102676 TGAGGAAATCATTGACAAGATACTCAA 58.897 33.333 16.31 0.00 32.10 3.02
1068 1212 8.503458 AGGAAATCATTGACAAGATACTCAAG 57.497 34.615 0.00 0.00 30.04 3.02
1069 1213 7.555554 AGGAAATCATTGACAAGATACTCAAGG 59.444 37.037 0.00 0.00 30.04 3.61
1080 1224 1.558167 TACTCAAGGGATTGCCGCCA 61.558 55.000 0.00 0.00 33.83 5.69
1113 1258 1.445410 CTGCCGCGCTGTTAGTACA 60.445 57.895 5.56 0.00 0.00 2.90
1137 1282 0.679505 GGCGCAGTATCACCTCCATA 59.320 55.000 10.83 0.00 0.00 2.74
1164 1309 2.093306 TTATGCTCGAACACCACCAG 57.907 50.000 0.00 0.00 0.00 4.00
1218 1363 2.978010 CGGCCTGCCAGTTTCGTT 60.978 61.111 9.17 0.00 35.37 3.85
1219 1364 2.954611 GGCCTGCCAGTTTCGTTC 59.045 61.111 2.58 0.00 35.81 3.95
1283 1434 1.690219 CCCTTCATCCCGGGTCTCAG 61.690 65.000 22.86 12.63 35.65 3.35
1284 1435 0.978146 CCTTCATCCCGGGTCTCAGT 60.978 60.000 22.86 0.00 0.00 3.41
1294 1445 1.825474 CGGGTCTCAGTCACTACCATT 59.175 52.381 0.00 0.00 33.46 3.16
1295 1446 2.233922 CGGGTCTCAGTCACTACCATTT 59.766 50.000 0.00 0.00 33.46 2.32
1304 1456 5.938125 TCAGTCACTACCATTTAAAGCCTTC 59.062 40.000 0.00 0.00 0.00 3.46
1315 1467 4.103749 AGCCTTCGCTCTCAGTCA 57.896 55.556 0.00 0.00 43.95 3.41
1345 1497 2.549778 GGCTTCCTCATCCTCATACAGC 60.550 54.545 0.00 0.00 0.00 4.40
1346 1498 2.103771 GCTTCCTCATCCTCATACAGCA 59.896 50.000 0.00 0.00 0.00 4.41
1350 1502 4.774124 TCCTCATCCTCATACAGCAAAAG 58.226 43.478 0.00 0.00 0.00 2.27
1377 1529 2.691409 ACATCTACAACCCGGTCATG 57.309 50.000 0.00 0.00 0.00 3.07
1399 1551 1.977544 AAGCGTGCTCTCCTACCGT 60.978 57.895 0.00 0.00 0.00 4.83
1418 1570 1.074889 GTACCCTCAAGCTGGGGAAAA 59.925 52.381 21.80 7.87 41.85 2.29
1503 1655 1.186200 CCACATTCCGTCCTCTCTCA 58.814 55.000 0.00 0.00 0.00 3.27
1566 1727 1.890894 GCCGAGGCAAGTCAGAGTA 59.109 57.895 9.58 0.00 41.49 2.59
1606 1782 2.565391 TCACCTTCCGCAGAACATAAGA 59.435 45.455 0.00 0.00 0.00 2.10
1622 1798 0.912486 AAGATACTGGGGGCACTGTC 59.088 55.000 0.00 0.00 0.00 3.51
1684 1869 0.954452 CCTGCACTGGTGTCCTTTTC 59.046 55.000 2.64 0.00 0.00 2.29
1687 1872 0.178990 GCACTGGTGTCCTTTTCCCT 60.179 55.000 2.64 0.00 0.00 4.20
1760 1945 2.369860 ACACAGAAGCAGAGTCATTCCA 59.630 45.455 0.00 0.00 0.00 3.53
1772 1957 0.740149 TCATTCCAATGGATGCGCAC 59.260 50.000 14.90 6.86 37.03 5.34
1819 2010 2.436417 AGTTGTTCGACATGAATGGGG 58.564 47.619 0.00 0.00 39.21 4.96
1833 2024 2.597510 GGGGCGCTTGGTTTCTGT 60.598 61.111 7.64 0.00 0.00 3.41
1852 2043 1.378762 GGCAGCTCAACCAAGGGTA 59.621 57.895 0.00 0.00 33.12 3.69
1854 2045 1.168714 GCAGCTCAACCAAGGGTAAG 58.831 55.000 0.00 0.00 33.12 2.34
1894 2085 5.774690 AGTTTCACTGCTTTGGATATTTGGA 59.225 36.000 0.00 0.00 0.00 3.53
1948 2139 3.179443 TCAAGTACCGGATTGATCTGC 57.821 47.619 9.46 0.00 30.67 4.26
1987 2178 5.049680 TCACGGCAACTTTATTTGACTTCTC 60.050 40.000 0.00 0.00 31.63 2.87
1989 2180 4.669197 CGGCAACTTTATTTGACTTCTCGG 60.669 45.833 0.00 0.00 31.63 4.63
2016 2207 3.550275 GGAAAAAGAAAACACCGCTTCAC 59.450 43.478 0.00 0.00 0.00 3.18
2155 2346 6.307155 GTGAACATTGGAAAGAGTCAATACG 58.693 40.000 0.00 0.00 32.92 3.06
2324 2529 5.043903 GCTCAGACCTTGTTTTTCTTTTCC 58.956 41.667 0.00 0.00 0.00 3.13
2370 2575 5.889853 ACAATGGCACTGTTATGATGAGATT 59.110 36.000 0.00 0.00 0.00 2.40
2374 2579 5.945191 TGGCACTGTTATGATGAGATTTTCA 59.055 36.000 0.00 0.00 40.85 2.69
2382 2587 8.186163 TGTTATGATGAGATTTTCAGTGATTGC 58.814 33.333 0.00 0.00 39.68 3.56
2384 2589 5.011586 TGATGAGATTTTCAGTGATTGCCA 58.988 37.500 0.00 0.00 39.68 4.92
2420 2625 1.135257 AGATCTTCGGTCTTGCTCGTG 60.135 52.381 0.00 0.00 0.00 4.35
2431 2636 2.351418 TCTTGCTCGTGTTGTTTGAGTG 59.649 45.455 0.00 0.00 32.32 3.51
2447 2652 3.159472 TGAGTGAATGCTTTTGGCTGAT 58.841 40.909 0.00 0.00 42.39 2.90
2452 2657 3.290710 GAATGCTTTTGGCTGATAGGGA 58.709 45.455 0.00 0.00 42.39 4.20
2453 2658 3.607490 ATGCTTTTGGCTGATAGGGAT 57.393 42.857 0.00 0.00 42.39 3.85
2475 2681 4.708177 TGCACTCTAGCATTTCCTTATCC 58.292 43.478 0.00 0.00 40.11 2.59
2587 2794 7.962964 TGTTCAGAATGTAAACTCTTAGGTG 57.037 36.000 0.00 0.00 37.40 4.00
2633 2840 0.392193 CTCGGTTGATCCTGCTGCTT 60.392 55.000 0.00 0.00 0.00 3.91
2674 2881 3.364549 GGGGCCATGCTTGCATATATAA 58.635 45.455 4.39 0.00 0.00 0.98
2677 2884 4.142315 GGGCCATGCTTGCATATATAACTG 60.142 45.833 4.39 0.00 0.00 3.16
2732 2939 0.727398 GAACCTCTATGCACGTTGGC 59.273 55.000 0.00 0.00 0.00 4.52
2758 2965 0.833287 TCAGGAGTATTGGCTGGAGC 59.167 55.000 0.00 0.00 41.14 4.70
2870 3078 1.238439 GTGTTGCTCTGCTTGGCTTA 58.762 50.000 0.00 0.00 0.00 3.09
2872 3080 2.229784 GTGTTGCTCTGCTTGGCTTATT 59.770 45.455 0.00 0.00 0.00 1.40
2874 3082 3.057315 TGTTGCTCTGCTTGGCTTATTTC 60.057 43.478 0.00 0.00 0.00 2.17
2879 3088 4.861462 GCTCTGCTTGGCTTATTTCTTTTC 59.139 41.667 0.00 0.00 0.00 2.29
2907 3116 0.240945 GTGTTGGTATGGCTGTGTGC 59.759 55.000 0.00 0.00 41.94 4.57
2963 3172 2.540973 GCCGGGTTTATCTTTTCGCATC 60.541 50.000 2.18 0.00 0.00 3.91
2979 3188 5.912360 TCGCATCAGCTTGATACTAAATG 57.088 39.130 0.00 0.00 34.28 2.32
2984 3193 2.887152 CAGCTTGATACTAAATGCCCCC 59.113 50.000 0.00 0.00 0.00 5.40
2996 3205 2.212327 TGCCCCCGCAAAAGAAAAA 58.788 47.368 0.00 0.00 43.74 1.94
3033 3244 8.454106 GCTAAATCAGCGACAATTATATGGATT 58.546 33.333 0.00 0.00 41.37 3.01
3040 3251 5.803145 GCGACAATTATATGGATTGGAGGGA 60.803 44.000 14.43 0.00 38.50 4.20
3047 3258 1.075601 TGGATTGGAGGGAGTGCTTT 58.924 50.000 0.00 0.00 0.00 3.51
3048 3259 1.428912 TGGATTGGAGGGAGTGCTTTT 59.571 47.619 0.00 0.00 0.00 2.27
3049 3260 2.158325 TGGATTGGAGGGAGTGCTTTTT 60.158 45.455 0.00 0.00 0.00 1.94
3054 3265 4.113617 GGGAGTGCTTTTTCCCCC 57.886 61.111 0.00 0.00 46.15 5.40
3055 3266 1.155155 GGGAGTGCTTTTTCCCCCA 59.845 57.895 0.00 0.00 46.15 4.96
3056 3267 0.471022 GGGAGTGCTTTTTCCCCCAA 60.471 55.000 0.00 0.00 46.15 4.12
3057 3268 1.419381 GGAGTGCTTTTTCCCCCAAA 58.581 50.000 0.00 0.00 0.00 3.28
3058 3269 1.765904 GGAGTGCTTTTTCCCCCAAAA 59.234 47.619 0.00 0.00 31.73 2.44
3059 3270 2.171659 GGAGTGCTTTTTCCCCCAAAAA 59.828 45.455 0.00 0.00 40.93 1.94
3060 3271 3.181445 GGAGTGCTTTTTCCCCCAAAAAT 60.181 43.478 0.00 0.00 42.02 1.82
3061 3272 4.041075 GGAGTGCTTTTTCCCCCAAAAATA 59.959 41.667 0.00 0.00 42.02 1.40
3062 3273 5.455469 GGAGTGCTTTTTCCCCCAAAAATAA 60.455 40.000 0.00 0.00 42.02 1.40
3063 3274 5.373222 AGTGCTTTTTCCCCCAAAAATAAC 58.627 37.500 0.00 0.00 42.02 1.89
3064 3275 5.104318 AGTGCTTTTTCCCCCAAAAATAACA 60.104 36.000 0.00 0.00 42.02 2.41
3065 3276 5.590663 GTGCTTTTTCCCCCAAAAATAACAA 59.409 36.000 0.00 0.00 42.02 2.83
3066 3277 5.825151 TGCTTTTTCCCCCAAAAATAACAAG 59.175 36.000 0.00 0.00 42.02 3.16
3067 3278 5.278266 GCTTTTTCCCCCAAAAATAACAAGC 60.278 40.000 0.00 0.00 42.02 4.01
3068 3279 5.638530 TTTTCCCCCAAAAATAACAAGCT 57.361 34.783 0.00 0.00 30.58 3.74
3069 3280 4.882842 TTCCCCCAAAAATAACAAGCTC 57.117 40.909 0.00 0.00 0.00 4.09
3070 3281 3.169908 TCCCCCAAAAATAACAAGCTCC 58.830 45.455 0.00 0.00 0.00 4.70
3071 3282 2.903135 CCCCCAAAAATAACAAGCTCCA 59.097 45.455 0.00 0.00 0.00 3.86
3072 3283 3.326297 CCCCCAAAAATAACAAGCTCCAA 59.674 43.478 0.00 0.00 0.00 3.53
3073 3284 4.314961 CCCCAAAAATAACAAGCTCCAAC 58.685 43.478 0.00 0.00 0.00 3.77
3074 3285 3.987220 CCCAAAAATAACAAGCTCCAACG 59.013 43.478 0.00 0.00 0.00 4.10
3075 3286 4.500716 CCCAAAAATAACAAGCTCCAACGT 60.501 41.667 0.00 0.00 0.00 3.99
3076 3287 5.047188 CCAAAAATAACAAGCTCCAACGTT 58.953 37.500 0.00 0.00 0.00 3.99
3077 3288 5.522097 CCAAAAATAACAAGCTCCAACGTTT 59.478 36.000 0.00 0.00 0.00 3.60
3078 3289 6.292114 CCAAAAATAACAAGCTCCAACGTTTC 60.292 38.462 0.00 0.00 0.00 2.78
3079 3290 5.767816 AAATAACAAGCTCCAACGTTTCT 57.232 34.783 0.00 0.00 0.00 2.52
3080 3291 4.749245 ATAACAAGCTCCAACGTTTCTG 57.251 40.909 0.00 0.00 0.00 3.02
3081 3292 2.038387 ACAAGCTCCAACGTTTCTGT 57.962 45.000 0.00 0.00 0.00 3.41
3082 3293 3.188159 ACAAGCTCCAACGTTTCTGTA 57.812 42.857 0.00 0.00 0.00 2.74
3083 3294 2.870411 ACAAGCTCCAACGTTTCTGTAC 59.130 45.455 0.00 0.00 0.00 2.90
3084 3295 2.869801 CAAGCTCCAACGTTTCTGTACA 59.130 45.455 0.00 0.00 0.00 2.90
3085 3296 3.402628 AGCTCCAACGTTTCTGTACAT 57.597 42.857 0.00 0.00 0.00 2.29
3086 3297 3.740115 AGCTCCAACGTTTCTGTACATT 58.260 40.909 0.00 0.00 0.00 2.71
3087 3298 4.134563 AGCTCCAACGTTTCTGTACATTT 58.865 39.130 0.00 0.00 0.00 2.32
3088 3299 5.302360 AGCTCCAACGTTTCTGTACATTTA 58.698 37.500 0.00 0.00 0.00 1.40
3089 3300 5.178809 AGCTCCAACGTTTCTGTACATTTAC 59.821 40.000 0.00 0.00 0.00 2.01
3090 3301 5.178809 GCTCCAACGTTTCTGTACATTTACT 59.821 40.000 0.00 0.00 0.00 2.24
3091 3302 6.293244 GCTCCAACGTTTCTGTACATTTACTT 60.293 38.462 0.00 0.00 0.00 2.24
3092 3303 6.950545 TCCAACGTTTCTGTACATTTACTTG 58.049 36.000 0.00 2.47 0.00 3.16
3093 3304 6.539464 TCCAACGTTTCTGTACATTTACTTGT 59.461 34.615 0.00 0.00 0.00 3.16
3094 3305 6.631238 CCAACGTTTCTGTACATTTACTTGTG 59.369 38.462 0.00 0.00 0.00 3.33
3095 3306 5.744490 ACGTTTCTGTACATTTACTTGTGC 58.256 37.500 0.00 0.00 33.40 4.57
3096 3307 4.838642 CGTTTCTGTACATTTACTTGTGCG 59.161 41.667 0.00 0.00 35.27 5.34
3097 3308 5.144359 GTTTCTGTACATTTACTTGTGCGG 58.856 41.667 0.00 0.00 39.22 5.69
3098 3309 3.997762 TCTGTACATTTACTTGTGCGGT 58.002 40.909 0.00 0.00 39.01 5.68
3099 3310 4.382291 TCTGTACATTTACTTGTGCGGTT 58.618 39.130 0.00 0.00 39.01 4.44
3100 3311 4.212425 TCTGTACATTTACTTGTGCGGTTG 59.788 41.667 0.00 0.00 39.01 3.77
3101 3312 3.878103 TGTACATTTACTTGTGCGGTTGT 59.122 39.130 0.00 0.00 35.27 3.32
3102 3313 5.055144 TGTACATTTACTTGTGCGGTTGTA 58.945 37.500 0.00 0.00 35.27 2.41
3103 3314 4.477302 ACATTTACTTGTGCGGTTGTAC 57.523 40.909 0.00 0.00 0.00 2.90
3104 3315 3.251487 ACATTTACTTGTGCGGTTGTACC 59.749 43.478 0.00 0.00 34.05 3.34
3105 3316 2.616634 TTACTTGTGCGGTTGTACCA 57.383 45.000 0.00 0.00 38.47 3.25
3106 3317 2.616634 TACTTGTGCGGTTGTACCAA 57.383 45.000 0.00 0.00 38.47 3.67
3107 3318 1.018910 ACTTGTGCGGTTGTACCAAC 58.981 50.000 0.00 0.00 38.47 3.77
3108 3319 1.018148 CTTGTGCGGTTGTACCAACA 58.982 50.000 9.12 0.00 38.47 3.33
3109 3320 1.606668 CTTGTGCGGTTGTACCAACAT 59.393 47.619 9.12 0.00 38.47 2.71
3110 3321 1.681538 TGTGCGGTTGTACCAACATT 58.318 45.000 9.12 0.00 38.47 2.71
3111 3322 2.025155 TGTGCGGTTGTACCAACATTT 58.975 42.857 9.12 0.00 38.47 2.32
3112 3323 2.033550 TGTGCGGTTGTACCAACATTTC 59.966 45.455 9.12 0.00 38.47 2.17
3113 3324 2.292292 GTGCGGTTGTACCAACATTTCT 59.708 45.455 9.12 0.00 38.47 2.52
3114 3325 2.952978 TGCGGTTGTACCAACATTTCTT 59.047 40.909 9.12 0.00 38.47 2.52
3115 3326 3.381908 TGCGGTTGTACCAACATTTCTTT 59.618 39.130 9.12 0.00 38.47 2.52
3116 3327 3.978855 GCGGTTGTACCAACATTTCTTTC 59.021 43.478 9.12 0.00 38.47 2.62
3117 3328 4.261447 GCGGTTGTACCAACATTTCTTTCT 60.261 41.667 9.12 0.00 38.47 2.52
3118 3329 5.212194 CGGTTGTACCAACATTTCTTTCTG 58.788 41.667 9.12 0.00 38.47 3.02
3119 3330 5.220970 CGGTTGTACCAACATTTCTTTCTGT 60.221 40.000 9.12 0.00 38.47 3.41
3120 3331 6.017770 CGGTTGTACCAACATTTCTTTCTGTA 60.018 38.462 9.12 0.00 38.47 2.74
3121 3332 7.360361 GGTTGTACCAACATTTCTTTCTGTAG 58.640 38.462 9.12 0.00 38.42 2.74
3122 3333 7.012989 GGTTGTACCAACATTTCTTTCTGTAGT 59.987 37.037 9.12 0.00 38.42 2.73
3123 3334 7.724305 TGTACCAACATTTCTTTCTGTAGTC 57.276 36.000 0.00 0.00 0.00 2.59
3124 3335 7.506114 TGTACCAACATTTCTTTCTGTAGTCT 58.494 34.615 0.00 0.00 0.00 3.24
3125 3336 7.990886 TGTACCAACATTTCTTTCTGTAGTCTT 59.009 33.333 0.00 0.00 0.00 3.01
3126 3337 9.485206 GTACCAACATTTCTTTCTGTAGTCTTA 57.515 33.333 0.00 0.00 0.00 2.10
3127 3338 8.379457 ACCAACATTTCTTTCTGTAGTCTTAC 57.621 34.615 0.00 0.00 0.00 2.34
3128 3339 8.211629 ACCAACATTTCTTTCTGTAGTCTTACT 58.788 33.333 0.00 0.00 0.00 2.24
3129 3340 9.706691 CCAACATTTCTTTCTGTAGTCTTACTA 57.293 33.333 0.00 0.00 0.00 1.82
3136 3347 9.517868 TTCTTTCTGTAGTCTTACTAACTAGCT 57.482 33.333 0.00 0.00 31.62 3.32
3140 3351 8.961294 TCTGTAGTCTTACTAACTAGCTAAGG 57.039 38.462 0.00 0.00 31.62 2.69
3141 3352 8.547173 TCTGTAGTCTTACTAACTAGCTAAGGT 58.453 37.037 0.00 0.00 31.62 3.50
3142 3353 9.829507 CTGTAGTCTTACTAACTAGCTAAGGTA 57.170 37.037 0.00 0.00 31.62 3.08
3146 3357 9.752228 AGTCTTACTAACTAGCTAAGGTAAGTT 57.248 33.333 21.02 14.40 38.01 2.66
3155 3366 8.265165 ACTAGCTAAGGTAAGTTATTTTGTGC 57.735 34.615 0.00 0.00 0.00 4.57
3156 3367 8.101419 ACTAGCTAAGGTAAGTTATTTTGTGCT 58.899 33.333 0.00 0.00 0.00 4.40
3157 3368 9.595823 CTAGCTAAGGTAAGTTATTTTGTGCTA 57.404 33.333 0.00 0.00 0.00 3.49
3158 3369 8.494016 AGCTAAGGTAAGTTATTTTGTGCTAG 57.506 34.615 0.00 0.00 0.00 3.42
3159 3370 8.101419 AGCTAAGGTAAGTTATTTTGTGCTAGT 58.899 33.333 0.00 0.00 0.00 2.57
3160 3371 8.388853 GCTAAGGTAAGTTATTTTGTGCTAGTC 58.611 37.037 0.00 0.00 0.00 2.59
3161 3372 9.654663 CTAAGGTAAGTTATTTTGTGCTAGTCT 57.345 33.333 0.00 0.00 0.00 3.24
3162 3373 8.549338 AAGGTAAGTTATTTTGTGCTAGTCTC 57.451 34.615 0.00 0.00 0.00 3.36
3163 3374 7.104290 AGGTAAGTTATTTTGTGCTAGTCTCC 58.896 38.462 0.00 0.00 0.00 3.71
3164 3375 6.877322 GGTAAGTTATTTTGTGCTAGTCTCCA 59.123 38.462 0.00 0.00 0.00 3.86
3165 3376 7.389607 GGTAAGTTATTTTGTGCTAGTCTCCAA 59.610 37.037 0.00 0.00 0.00 3.53
3179 3662 5.053978 AGTCTCCAATCTCTTTTTGGTGT 57.946 39.130 2.65 0.00 43.41 4.16
3198 3681 5.167845 GGTGTCATGTGTTGTTTGAAGTTT 58.832 37.500 0.00 0.00 0.00 2.66
3218 3701 9.915629 GAAGTTTGAAACTCTAGAGAGATTGTA 57.084 33.333 26.57 6.87 44.74 2.41
3276 3759 2.612721 GCCGGCTGGAATGAATGTTTTT 60.613 45.455 22.15 0.00 37.49 1.94
3279 3762 4.157656 CCGGCTGGAATGAATGTTTTTAGA 59.842 41.667 5.28 0.00 37.49 2.10
3283 3766 6.095377 GCTGGAATGAATGTTTTTAGACTGG 58.905 40.000 0.00 0.00 0.00 4.00
3286 3769 7.004086 TGGAATGAATGTTTTTAGACTGGTCT 58.996 34.615 8.36 8.36 43.40 3.85
3370 3853 4.978083 ATGAACCAGACTTGATGAATGC 57.022 40.909 0.00 0.00 0.00 3.56
3376 3859 0.302890 GACTTGATGAATGCGCCTCG 59.697 55.000 4.18 0.00 0.00 4.63
3386 3869 2.668550 GCGCCTCGTTGAAACCCT 60.669 61.111 0.00 0.00 0.00 4.34
3395 3878 4.577283 CCTCGTTGAAACCCTAAACTGAAA 59.423 41.667 0.00 0.00 0.00 2.69
3396 3879 5.277828 CCTCGTTGAAACCCTAAACTGAAAG 60.278 44.000 0.00 0.00 42.29 2.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.458716 GTAGGCTGTGCGGAGAAGAC 60.459 60.000 0.00 0.00 0.00 3.01
2 3 1.517257 CGTAGGCTGTGCGGAGAAG 60.517 63.158 0.00 0.00 0.00 2.85
3 4 0.961857 TACGTAGGCTGTGCGGAGAA 60.962 55.000 0.00 0.00 38.83 2.87
4 5 1.377594 TACGTAGGCTGTGCGGAGA 60.378 57.895 0.00 0.00 38.83 3.71
5 6 1.226603 GTACGTAGGCTGTGCGGAG 60.227 63.158 0.00 0.00 38.83 4.63
6 7 1.651240 GAGTACGTAGGCTGTGCGGA 61.651 60.000 0.00 0.00 38.83 5.54
7 8 1.226603 GAGTACGTAGGCTGTGCGG 60.227 63.158 0.00 0.00 38.83 5.69
8 9 1.582937 CGAGTACGTAGGCTGTGCG 60.583 63.158 0.00 1.49 40.63 5.34
141 142 4.214327 CGAAGCTCGGGGAGAGGC 62.214 72.222 0.00 0.00 46.91 4.70
172 173 2.111878 GACGATGGGGATGCCAGG 59.888 66.667 5.30 0.00 0.00 4.45
173 174 1.070445 GAGACGATGGGGATGCCAG 59.930 63.158 5.30 0.00 0.00 4.85
174 175 2.443394 GGAGACGATGGGGATGCCA 61.443 63.158 5.30 0.00 0.00 4.92
175 176 2.105806 GAGGAGACGATGGGGATGCC 62.106 65.000 0.00 0.00 0.00 4.40
176 177 1.369321 GAGGAGACGATGGGGATGC 59.631 63.158 0.00 0.00 0.00 3.91
177 178 0.823769 TCGAGGAGACGATGGGGATG 60.824 60.000 0.00 0.00 37.37 3.51
178 179 0.538516 CTCGAGGAGACGATGGGGAT 60.539 60.000 3.91 0.00 41.39 3.85
179 180 1.152943 CTCGAGGAGACGATGGGGA 60.153 63.158 3.91 0.00 41.39 4.81
213 214 2.083774 TGGGTCAATGAATCGAACAGC 58.916 47.619 0.00 0.00 0.00 4.40
231 232 3.851403 CGAAATGCTAAAACATCCGTTGG 59.149 43.478 0.00 0.00 34.86 3.77
232 233 4.320690 CACGAAATGCTAAAACATCCGTTG 59.679 41.667 0.00 0.00 34.86 4.10
233 234 4.472286 CACGAAATGCTAAAACATCCGTT 58.528 39.130 0.00 0.00 36.73 4.44
237 238 3.179048 GGCCACGAAATGCTAAAACATC 58.821 45.455 0.00 0.00 0.00 3.06
238 239 2.415357 CGGCCACGAAATGCTAAAACAT 60.415 45.455 2.24 0.00 44.60 2.71
239 240 1.068885 CGGCCACGAAATGCTAAAACA 60.069 47.619 2.24 0.00 44.60 2.83
240 241 1.613270 CGGCCACGAAATGCTAAAAC 58.387 50.000 2.24 0.00 44.60 2.43
252 253 3.865929 AACAGCACTCTCGGCCACG 62.866 63.158 2.24 0.00 42.74 4.94
253 254 2.031163 AACAGCACTCTCGGCCAC 59.969 61.111 2.24 0.00 0.00 5.01
254 255 2.031012 CAACAGCACTCTCGGCCA 59.969 61.111 2.24 0.00 0.00 5.36
255 256 3.426568 GCAACAGCACTCTCGGCC 61.427 66.667 0.00 0.00 0.00 6.13
256 257 3.782244 CGCAACAGCACTCTCGGC 61.782 66.667 0.00 0.00 0.00 5.54
257 258 1.221466 TTTCGCAACAGCACTCTCGG 61.221 55.000 0.00 0.00 0.00 4.63
265 266 0.525761 TTAGGCCATTTCGCAACAGC 59.474 50.000 5.01 0.00 0.00 4.40
272 273 5.300752 ACATCTATCTGTTAGGCCATTTCG 58.699 41.667 5.01 0.00 0.00 3.46
299 302 2.160219 CACACCATGGTTCGATTCTGTG 59.840 50.000 16.84 13.81 0.00 3.66
301 304 2.698803 TCACACCATGGTTCGATTCTG 58.301 47.619 16.84 3.65 0.00 3.02
302 305 3.634397 ATCACACCATGGTTCGATTCT 57.366 42.857 16.84 0.00 0.00 2.40
303 306 4.082787 ACAAATCACACCATGGTTCGATTC 60.083 41.667 27.30 0.00 26.63 2.52
307 310 2.293122 ACACAAATCACACCATGGTTCG 59.707 45.455 16.84 9.48 26.63 3.95
313 316 3.023119 ACACACACACAAATCACACCAT 58.977 40.909 0.00 0.00 0.00 3.55
315 318 3.128589 AGAACACACACACAAATCACACC 59.871 43.478 0.00 0.00 0.00 4.16
316 319 4.142708 TGAGAACACACACACAAATCACAC 60.143 41.667 0.00 0.00 0.00 3.82
318 321 4.614555 TGAGAACACACACACAAATCAC 57.385 40.909 0.00 0.00 0.00 3.06
319 322 5.635417 TTTGAGAACACACACACAAATCA 57.365 34.783 0.00 0.00 0.00 2.57
320 323 6.264832 TCATTTGAGAACACACACACAAATC 58.735 36.000 0.00 0.00 36.34 2.17
322 325 5.635417 TCATTTGAGAACACACACACAAA 57.365 34.783 0.00 0.00 0.00 2.83
324 327 4.980590 GTTCATTTGAGAACACACACACA 58.019 39.130 0.00 0.00 45.53 3.72
336 339 5.693104 CAGAACAAACCATGGTTCATTTGAG 59.307 40.000 29.91 15.34 44.46 3.02
338 341 5.358922 ACAGAACAAACCATGGTTCATTTG 58.641 37.500 29.91 24.64 44.46 2.32
339 342 5.612725 ACAGAACAAACCATGGTTCATTT 57.387 34.783 29.91 21.34 44.46 2.32
340 343 5.612725 AACAGAACAAACCATGGTTCATT 57.387 34.783 29.91 24.68 44.46 2.57
341 344 5.612725 AAACAGAACAAACCATGGTTCAT 57.387 34.783 29.91 18.06 44.46 2.57
342 345 5.413309 AAAACAGAACAAACCATGGTTCA 57.587 34.783 29.91 0.00 44.46 3.18
343 346 5.293324 GGAAAAACAGAACAAACCATGGTTC 59.707 40.000 29.91 17.73 42.82 3.62
344 347 5.182487 GGAAAAACAGAACAAACCATGGTT 58.818 37.500 24.86 24.86 40.45 3.67
345 348 4.383661 GGGAAAAACAGAACAAACCATGGT 60.384 41.667 13.00 13.00 0.00 3.55
346 349 4.126437 GGGAAAAACAGAACAAACCATGG 58.874 43.478 11.19 11.19 0.00 3.66
347 350 4.810491 CAGGGAAAAACAGAACAAACCATG 59.190 41.667 0.00 0.00 0.00 3.66
348 351 4.469586 ACAGGGAAAAACAGAACAAACCAT 59.530 37.500 0.00 0.00 0.00 3.55
374 377 8.506437 CAAGAGCAGATTATACAAGAACAAACA 58.494 33.333 0.00 0.00 0.00 2.83
375 378 7.483059 GCAAGAGCAGATTATACAAGAACAAAC 59.517 37.037 0.00 0.00 41.58 2.93
379 387 6.713520 CAGCAAGAGCAGATTATACAAGAAC 58.286 40.000 0.00 0.00 45.49 3.01
386 394 5.027293 TGAAGCAGCAAGAGCAGATTATA 57.973 39.130 0.00 0.00 45.49 0.98
391 399 2.195741 ATTGAAGCAGCAAGAGCAGA 57.804 45.000 0.00 0.00 45.49 4.26
429 437 8.034215 AGAACTGAATCATTACAGAGAAGACTG 58.966 37.037 0.00 0.00 42.78 3.51
430 438 8.133024 AGAACTGAATCATTACAGAGAAGACT 57.867 34.615 0.00 0.00 37.54 3.24
431 439 8.655092 CAAGAACTGAATCATTACAGAGAAGAC 58.345 37.037 0.00 0.00 37.54 3.01
432 440 7.332926 GCAAGAACTGAATCATTACAGAGAAGA 59.667 37.037 0.00 0.00 37.54 2.87
433 441 7.333921 AGCAAGAACTGAATCATTACAGAGAAG 59.666 37.037 0.00 0.00 37.54 2.85
434 442 7.164122 AGCAAGAACTGAATCATTACAGAGAA 58.836 34.615 0.00 0.00 37.54 2.87
435 443 6.705302 AGCAAGAACTGAATCATTACAGAGA 58.295 36.000 0.00 0.00 37.54 3.10
436 444 6.981762 AGCAAGAACTGAATCATTACAGAG 57.018 37.500 0.00 0.00 37.54 3.35
437 445 6.372659 GGAAGCAAGAACTGAATCATTACAGA 59.627 38.462 0.00 0.00 37.54 3.41
438 446 6.149973 TGGAAGCAAGAACTGAATCATTACAG 59.850 38.462 0.00 0.00 39.65 2.74
439 447 6.003326 TGGAAGCAAGAACTGAATCATTACA 58.997 36.000 0.00 0.00 0.00 2.41
440 448 6.500684 TGGAAGCAAGAACTGAATCATTAC 57.499 37.500 0.00 0.00 0.00 1.89
441 449 8.985315 ATATGGAAGCAAGAACTGAATCATTA 57.015 30.769 0.00 0.00 0.00 1.90
442 450 7.893124 ATATGGAAGCAAGAACTGAATCATT 57.107 32.000 0.00 0.00 0.00 2.57
443 451 8.985315 TTATATGGAAGCAAGAACTGAATCAT 57.015 30.769 0.00 0.00 0.00 2.45
444 452 8.985315 ATTATATGGAAGCAAGAACTGAATCA 57.015 30.769 0.00 0.00 0.00 2.57
445 453 9.282569 AGATTATATGGAAGCAAGAACTGAATC 57.717 33.333 0.00 0.00 0.00 2.52
446 454 9.064706 CAGATTATATGGAAGCAAGAACTGAAT 57.935 33.333 0.00 0.00 0.00 2.57
447 455 7.012704 GCAGATTATATGGAAGCAAGAACTGAA 59.987 37.037 0.00 0.00 0.00 3.02
448 456 6.484643 GCAGATTATATGGAAGCAAGAACTGA 59.515 38.462 0.00 0.00 0.00 3.41
449 457 6.485984 AGCAGATTATATGGAAGCAAGAACTG 59.514 38.462 0.00 0.00 0.00 3.16
450 458 6.599445 AGCAGATTATATGGAAGCAAGAACT 58.401 36.000 0.00 0.00 0.00 3.01
451 459 6.874288 AGCAGATTATATGGAAGCAAGAAC 57.126 37.500 0.00 0.00 0.00 3.01
452 460 7.285566 AGAAGCAGATTATATGGAAGCAAGAA 58.714 34.615 0.00 0.00 0.00 2.52
453 461 6.835174 AGAAGCAGATTATATGGAAGCAAGA 58.165 36.000 0.00 0.00 0.00 3.02
454 462 8.789825 ATAGAAGCAGATTATATGGAAGCAAG 57.210 34.615 0.00 0.00 0.00 4.01
482 490 5.246203 ACACAGCAGGTTATACAAGAAGAGA 59.754 40.000 0.00 0.00 0.00 3.10
483 491 5.482908 ACACAGCAGGTTATACAAGAAGAG 58.517 41.667 0.00 0.00 0.00 2.85
503 511 6.072508 TGGAAGCAGAAACTGAATCATTACAC 60.073 38.462 2.81 0.00 32.44 2.90
509 546 7.066645 CAGAATATGGAAGCAGAAACTGAATCA 59.933 37.037 2.81 0.00 32.44 2.57
510 547 7.066766 ACAGAATATGGAAGCAGAAACTGAATC 59.933 37.037 0.00 0.34 32.44 2.52
511 548 6.888632 ACAGAATATGGAAGCAGAAACTGAAT 59.111 34.615 0.00 0.00 32.44 2.57
531 568 7.168219 ACAGAGCAAATTATACAGGAACAGAA 58.832 34.615 0.00 0.00 0.00 3.02
557 598 7.094890 TGCAACTTTTGACAACAACAAATCATT 60.095 29.630 0.00 0.00 37.15 2.57
564 605 4.022416 AGACTGCAACTTTTGACAACAACA 60.022 37.500 0.00 0.00 35.63 3.33
565 606 4.324402 CAGACTGCAACTTTTGACAACAAC 59.676 41.667 0.00 0.00 35.63 3.32
568 610 3.128589 TCCAGACTGCAACTTTTGACAAC 59.871 43.478 0.00 0.00 0.00 3.32
573 615 2.684881 ACACTCCAGACTGCAACTTTTG 59.315 45.455 0.00 0.00 0.00 2.44
632 737 1.860078 CGGAACAGCAACTCGGTTC 59.140 57.895 0.00 0.00 45.28 3.62
633 738 2.251642 GCGGAACAGCAACTCGGTT 61.252 57.895 0.00 0.00 35.80 4.44
634 739 2.660258 AAGCGGAACAGCAACTCGGT 62.660 55.000 0.00 0.00 40.15 4.69
635 740 0.669318 TAAGCGGAACAGCAACTCGG 60.669 55.000 0.00 0.00 40.15 4.63
636 741 1.136336 GTTAAGCGGAACAGCAACTCG 60.136 52.381 0.00 0.00 40.15 4.18
637 742 1.136336 CGTTAAGCGGAACAGCAACTC 60.136 52.381 4.90 0.00 40.15 3.01
638 743 0.865769 CGTTAAGCGGAACAGCAACT 59.134 50.000 4.90 0.00 40.15 3.16
639 744 0.724785 GCGTTAAGCGGAACAGCAAC 60.725 55.000 12.15 0.00 41.69 4.17
640 745 1.572447 GCGTTAAGCGGAACAGCAA 59.428 52.632 12.15 0.00 41.69 3.91
641 746 3.249999 GCGTTAAGCGGAACAGCA 58.750 55.556 12.15 0.00 41.69 4.41
651 756 1.654105 GAGATGTGTGTCGGCGTTAAG 59.346 52.381 6.85 0.00 0.00 1.85
652 757 1.670674 GGAGATGTGTGTCGGCGTTAA 60.671 52.381 6.85 0.00 0.00 2.01
653 758 0.108992 GGAGATGTGTGTCGGCGTTA 60.109 55.000 6.85 0.00 0.00 3.18
654 759 1.374252 GGAGATGTGTGTCGGCGTT 60.374 57.895 6.85 0.00 0.00 4.84
655 760 2.261671 GGAGATGTGTGTCGGCGT 59.738 61.111 6.85 0.00 0.00 5.68
656 761 2.880879 CGGAGATGTGTGTCGGCG 60.881 66.667 0.00 0.00 0.00 6.46
657 762 3.188786 GCGGAGATGTGTGTCGGC 61.189 66.667 0.00 0.00 36.94 5.54
658 763 2.509336 GGCGGAGATGTGTGTCGG 60.509 66.667 0.00 0.00 0.00 4.79
659 764 2.880879 CGGCGGAGATGTGTGTCG 60.881 66.667 0.00 0.00 0.00 4.35
660 765 3.188786 GCGGCGGAGATGTGTGTC 61.189 66.667 9.78 0.00 0.00 3.67
661 766 4.760047 GGCGGCGGAGATGTGTGT 62.760 66.667 9.78 0.00 0.00 3.72
678 783 1.409661 CCCGTGGAATTAAGAAGGGGG 60.410 57.143 0.00 0.00 34.69 5.40
679 784 1.562475 TCCCGTGGAATTAAGAAGGGG 59.438 52.381 0.00 0.00 38.77 4.79
680 785 2.919228 CTCCCGTGGAATTAAGAAGGG 58.081 52.381 0.00 0.00 38.73 3.95
681 786 2.289565 GCTCCCGTGGAATTAAGAAGG 58.710 52.381 0.00 0.00 0.00 3.46
682 787 2.678336 GTGCTCCCGTGGAATTAAGAAG 59.322 50.000 0.00 0.00 0.00 2.85
683 788 2.706890 GTGCTCCCGTGGAATTAAGAA 58.293 47.619 0.00 0.00 0.00 2.52
684 789 1.404986 CGTGCTCCCGTGGAATTAAGA 60.405 52.381 0.00 0.00 0.00 2.10
685 790 1.006832 CGTGCTCCCGTGGAATTAAG 58.993 55.000 0.00 0.00 0.00 1.85
686 791 1.022451 GCGTGCTCCCGTGGAATTAA 61.022 55.000 0.00 0.00 0.00 1.40
687 792 1.448893 GCGTGCTCCCGTGGAATTA 60.449 57.895 0.00 0.00 0.00 1.40
688 793 2.746277 GCGTGCTCCCGTGGAATT 60.746 61.111 0.00 0.00 0.00 2.17
689 794 4.778143 GGCGTGCTCCCGTGGAAT 62.778 66.667 0.00 0.00 0.00 3.01
707 812 3.879180 TTTGGGAAGAAGGCGCCCC 62.879 63.158 26.15 17.14 41.31 5.80
708 813 2.282887 TTTGGGAAGAAGGCGCCC 60.283 61.111 26.15 9.10 42.38 6.13
709 814 2.962569 GTTTGGGAAGAAGGCGCC 59.037 61.111 21.89 21.89 0.00 6.53
710 815 2.561373 CGTTTGGGAAGAAGGCGC 59.439 61.111 0.00 0.00 0.00 6.53
711 816 2.187599 CTGCGTTTGGGAAGAAGGCG 62.188 60.000 0.00 0.00 39.89 5.52
712 817 1.581447 CTGCGTTTGGGAAGAAGGC 59.419 57.895 0.00 0.00 38.12 4.35
713 818 0.537371 ACCTGCGTTTGGGAAGAAGG 60.537 55.000 0.00 0.00 0.00 3.46
714 819 0.593128 CACCTGCGTTTGGGAAGAAG 59.407 55.000 0.00 0.00 0.00 2.85
715 820 0.181587 TCACCTGCGTTTGGGAAGAA 59.818 50.000 0.00 0.00 0.00 2.52
716 821 0.250295 CTCACCTGCGTTTGGGAAGA 60.250 55.000 0.00 0.00 0.00 2.87
717 822 1.856265 GCTCACCTGCGTTTGGGAAG 61.856 60.000 0.00 0.00 0.00 3.46
718 823 1.896660 GCTCACCTGCGTTTGGGAA 60.897 57.895 0.00 0.00 0.00 3.97
719 824 2.281484 GCTCACCTGCGTTTGGGA 60.281 61.111 0.00 0.00 0.00 4.37
720 825 2.594303 TGCTCACCTGCGTTTGGG 60.594 61.111 0.00 0.00 35.36 4.12
721 826 2.949106 CTGCTCACCTGCGTTTGG 59.051 61.111 0.00 0.00 35.36 3.28
722 827 2.180131 GAGCTGCTCACCTGCGTTTG 62.180 60.000 24.02 0.00 42.57 2.93
723 828 1.963338 GAGCTGCTCACCTGCGTTT 60.963 57.895 24.02 0.00 42.57 3.60
724 829 2.358003 GAGCTGCTCACCTGCGTT 60.358 61.111 24.02 0.00 42.57 4.84
725 830 4.731612 CGAGCTGCTCACCTGCGT 62.732 66.667 27.46 0.00 42.57 5.24
746 851 2.131067 AAACCACGGCCAGTTTGGG 61.131 57.895 13.20 7.60 38.19 4.12
747 852 1.067250 CAAACCACGGCCAGTTTGG 59.933 57.895 24.95 17.60 45.78 3.28
748 853 4.728058 CAAACCACGGCCAGTTTG 57.272 55.556 21.70 21.70 44.75 2.93
749 854 0.395173 AGACAAACCACGGCCAGTTT 60.395 50.000 2.24 6.64 36.65 2.66
750 855 1.101049 CAGACAAACCACGGCCAGTT 61.101 55.000 2.24 0.00 0.00 3.16
751 856 1.525995 CAGACAAACCACGGCCAGT 60.526 57.895 2.24 0.00 0.00 4.00
752 857 2.908073 GCAGACAAACCACGGCCAG 61.908 63.158 2.24 0.00 0.00 4.85
753 858 2.904866 GCAGACAAACCACGGCCA 60.905 61.111 2.24 0.00 0.00 5.36
754 859 2.010582 TTTGCAGACAAACCACGGCC 62.011 55.000 0.00 0.00 40.84 6.13
755 860 0.179124 TTTTGCAGACAAACCACGGC 60.179 50.000 0.00 0.00 45.29 5.68
756 861 2.285827 TTTTTGCAGACAAACCACGG 57.714 45.000 0.00 0.00 45.29 4.94
757 862 3.486841 CAGATTTTTGCAGACAAACCACG 59.513 43.478 0.00 0.00 45.29 4.94
758 863 4.504097 GTCAGATTTTTGCAGACAAACCAC 59.496 41.667 0.00 0.00 45.29 4.16
759 864 4.441356 GGTCAGATTTTTGCAGACAAACCA 60.441 41.667 2.90 0.00 45.29 3.67
760 865 4.051237 GGTCAGATTTTTGCAGACAAACC 58.949 43.478 2.90 0.00 45.29 3.27
761 866 4.936891 AGGTCAGATTTTTGCAGACAAAC 58.063 39.130 2.90 0.00 45.29 2.93
762 867 5.350633 CAAGGTCAGATTTTTGCAGACAAA 58.649 37.500 2.90 0.00 43.97 2.83
763 868 4.202141 CCAAGGTCAGATTTTTGCAGACAA 60.202 41.667 2.90 0.00 0.00 3.18
764 869 3.318839 CCAAGGTCAGATTTTTGCAGACA 59.681 43.478 2.90 0.00 0.00 3.41
765 870 3.319122 ACCAAGGTCAGATTTTTGCAGAC 59.681 43.478 0.00 0.00 0.00 3.51
766 871 3.318839 CACCAAGGTCAGATTTTTGCAGA 59.681 43.478 0.00 0.00 0.00 4.26
767 872 3.645884 CACCAAGGTCAGATTTTTGCAG 58.354 45.455 0.00 0.00 0.00 4.41
768 873 2.224018 GCACCAAGGTCAGATTTTTGCA 60.224 45.455 0.00 0.00 0.00 4.08
769 874 2.036346 AGCACCAAGGTCAGATTTTTGC 59.964 45.455 0.00 0.00 0.00 3.68
770 875 3.905784 GAGCACCAAGGTCAGATTTTTG 58.094 45.455 0.00 0.00 44.14 2.44
783 888 2.057137 AAGCAAGACTTGAGCACCAA 57.943 45.000 19.51 0.00 37.17 3.67
784 889 3.806941 AAGCAAGACTTGAGCACCA 57.193 47.368 19.51 0.00 37.17 4.17
792 897 6.992715 AGTAGACACAAATACAAGCAAGACTT 59.007 34.615 0.00 0.00 40.05 3.01
793 898 6.425114 CAGTAGACACAAATACAAGCAAGACT 59.575 38.462 0.00 0.00 0.00 3.24
794 899 6.202954 ACAGTAGACACAAATACAAGCAAGAC 59.797 38.462 0.00 0.00 0.00 3.01
795 900 6.288294 ACAGTAGACACAAATACAAGCAAGA 58.712 36.000 0.00 0.00 0.00 3.02
796 901 6.425114 AGACAGTAGACACAAATACAAGCAAG 59.575 38.462 0.00 0.00 0.00 4.01
797 902 6.288294 AGACAGTAGACACAAATACAAGCAA 58.712 36.000 0.00 0.00 0.00 3.91
798 903 5.853936 AGACAGTAGACACAAATACAAGCA 58.146 37.500 0.00 0.00 0.00 3.91
799 904 6.866770 TGTAGACAGTAGACACAAATACAAGC 59.133 38.462 0.00 0.00 0.00 4.01
800 905 7.062371 GCTGTAGACAGTAGACACAAATACAAG 59.938 40.741 11.19 0.00 45.45 3.16
801 906 6.866770 GCTGTAGACAGTAGACACAAATACAA 59.133 38.462 11.19 0.00 45.45 2.41
802 907 6.387465 GCTGTAGACAGTAGACACAAATACA 58.613 40.000 11.19 0.00 45.45 2.29
803 908 5.805994 GGCTGTAGACAGTAGACACAAATAC 59.194 44.000 11.19 0.00 45.45 1.89
804 909 5.479027 TGGCTGTAGACAGTAGACACAAATA 59.521 40.000 11.19 0.00 45.45 1.40
805 910 4.283467 TGGCTGTAGACAGTAGACACAAAT 59.717 41.667 11.19 0.00 45.45 2.32
806 911 3.639561 TGGCTGTAGACAGTAGACACAAA 59.360 43.478 11.19 0.00 45.45 2.83
807 912 3.005472 GTGGCTGTAGACAGTAGACACAA 59.995 47.826 11.19 0.00 45.45 3.33
808 913 2.557056 GTGGCTGTAGACAGTAGACACA 59.443 50.000 11.19 0.00 45.45 3.72
809 914 2.557056 TGTGGCTGTAGACAGTAGACAC 59.443 50.000 11.19 13.85 45.45 3.67
810 915 2.871453 TGTGGCTGTAGACAGTAGACA 58.129 47.619 11.19 8.49 45.45 3.41
811 916 4.457834 AATGTGGCTGTAGACAGTAGAC 57.542 45.455 11.19 6.30 45.45 2.59
812 917 4.772624 AGAAATGTGGCTGTAGACAGTAGA 59.227 41.667 11.19 0.85 45.45 2.59
813 918 5.078411 AGAAATGTGGCTGTAGACAGTAG 57.922 43.478 11.19 0.00 45.45 2.57
814 919 4.526650 TGAGAAATGTGGCTGTAGACAGTA 59.473 41.667 11.19 0.00 45.45 2.74
815 920 3.324846 TGAGAAATGTGGCTGTAGACAGT 59.675 43.478 11.19 0.00 45.45 3.55
816 921 3.681897 GTGAGAAATGTGGCTGTAGACAG 59.318 47.826 5.26 5.26 46.40 3.51
817 922 3.557054 GGTGAGAAATGTGGCTGTAGACA 60.557 47.826 0.00 0.00 0.00 3.41
818 923 3.003480 GGTGAGAAATGTGGCTGTAGAC 58.997 50.000 0.00 0.00 0.00 2.59
819 924 2.353704 CGGTGAGAAATGTGGCTGTAGA 60.354 50.000 0.00 0.00 0.00 2.59
820 925 2.002586 CGGTGAGAAATGTGGCTGTAG 58.997 52.381 0.00 0.00 0.00 2.74
821 926 1.346395 ACGGTGAGAAATGTGGCTGTA 59.654 47.619 0.00 0.00 0.00 2.74
822 927 0.108585 ACGGTGAGAAATGTGGCTGT 59.891 50.000 0.00 0.00 0.00 4.40
823 928 1.069022 CAACGGTGAGAAATGTGGCTG 60.069 52.381 0.00 0.00 0.00 4.85
824 929 1.238439 CAACGGTGAGAAATGTGGCT 58.762 50.000 0.00 0.00 0.00 4.75
825 930 0.951558 ACAACGGTGAGAAATGTGGC 59.048 50.000 7.88 0.00 0.00 5.01
826 931 2.858260 GCAACAACGGTGAGAAATGTGG 60.858 50.000 7.88 0.00 0.00 4.17
827 932 2.033299 AGCAACAACGGTGAGAAATGTG 59.967 45.455 7.88 0.00 0.00 3.21
828 933 2.033299 CAGCAACAACGGTGAGAAATGT 59.967 45.455 7.88 0.00 36.48 2.71
829 934 2.605338 CCAGCAACAACGGTGAGAAATG 60.605 50.000 7.88 0.00 36.48 2.32
830 935 1.608590 CCAGCAACAACGGTGAGAAAT 59.391 47.619 7.88 0.00 36.48 2.17
831 936 1.021202 CCAGCAACAACGGTGAGAAA 58.979 50.000 7.88 0.00 36.48 2.52
832 937 0.179234 TCCAGCAACAACGGTGAGAA 59.821 50.000 7.88 0.00 36.48 2.87
833 938 0.179234 TTCCAGCAACAACGGTGAGA 59.821 50.000 7.88 0.00 36.48 3.27
834 939 0.307760 GTTCCAGCAACAACGGTGAG 59.692 55.000 7.88 0.00 36.48 3.51
835 940 1.098712 GGTTCCAGCAACAACGGTGA 61.099 55.000 7.88 0.00 36.61 4.02
842 986 2.195567 GCAGCAGGTTCCAGCAACA 61.196 57.895 8.79 0.00 36.61 3.33
845 989 2.033141 GAGCAGCAGGTTCCAGCA 59.967 61.111 8.79 0.00 0.00 4.41
867 1011 1.673920 GTTGTCCTTGGAAAGCGAACA 59.326 47.619 0.00 0.00 44.44 3.18
874 1018 4.022416 GCACATACATGTTGTCCTTGGAAA 60.022 41.667 2.30 0.00 39.39 3.13
880 1024 5.072741 AGAAAAGCACATACATGTTGTCCT 58.927 37.500 2.30 1.10 39.39 3.85
910 1054 4.913376 CGACCAGCATAAATGAAGGAAAG 58.087 43.478 7.77 0.00 0.00 2.62
985 1129 1.672356 GCATGGTGCTCCGTTGTCT 60.672 57.895 0.00 0.00 40.96 3.41
1016 1160 3.764466 CCTCGAGCAGGGTCGCTT 61.764 66.667 15.36 0.00 44.01 4.68
1067 1211 2.362889 CCTTTGGCGGCAATCCCT 60.363 61.111 26.07 0.00 0.00 4.20
1068 1212 2.362375 TCCTTTGGCGGCAATCCC 60.362 61.111 26.07 0.00 0.00 3.85
1069 1213 2.885113 GTCCTTTGGCGGCAATCC 59.115 61.111 26.07 9.68 0.00 3.01
1113 1258 0.253044 AGGTGATACTGCGCCACAAT 59.747 50.000 4.18 0.00 40.91 2.71
1137 1282 3.689649 GGTGTTCGAGCATAAATTCAGGT 59.310 43.478 4.92 0.00 0.00 4.00
1283 1434 4.436986 GCGAAGGCTTTAAATGGTAGTGAC 60.437 45.833 0.00 0.00 35.83 3.67
1284 1435 3.687698 GCGAAGGCTTTAAATGGTAGTGA 59.312 43.478 0.00 0.00 35.83 3.41
1315 1467 1.211457 GATGAGGAAGCCATCACAGGT 59.789 52.381 0.00 0.00 39.98 4.00
1345 1497 7.962918 CGGGTTGTAGATGTAGAATTTCTTTTG 59.037 37.037 3.86 0.00 0.00 2.44
1346 1498 7.120726 CCGGGTTGTAGATGTAGAATTTCTTTT 59.879 37.037 3.86 0.00 0.00 2.27
1350 1502 5.425630 ACCGGGTTGTAGATGTAGAATTTC 58.574 41.667 6.32 0.00 0.00 2.17
1399 1551 1.074889 GTTTTCCCCAGCTTGAGGGTA 59.925 52.381 12.04 1.39 45.28 3.69
1414 1566 2.405892 ATGTTGCTGCACTCGTTTTC 57.594 45.000 0.00 0.00 0.00 2.29
1418 1570 1.660607 CGATTATGTTGCTGCACTCGT 59.339 47.619 0.00 2.88 0.00 4.18
1503 1655 8.255905 AGAACGTATAAGCTGTATTTAACCACT 58.744 33.333 0.00 0.00 0.00 4.00
1566 1727 3.316308 GTGACAAGACTGTTGGCATTCTT 59.684 43.478 0.00 0.00 42.80 2.52
1606 1782 0.341961 TAGGACAGTGCCCCCAGTAT 59.658 55.000 0.00 0.00 0.00 2.12
1622 1798 4.809426 GTGGTGGACAATAGTTCGAATAGG 59.191 45.833 0.00 0.00 0.00 2.57
1684 1869 2.903547 CGGCGACACCACAAAAGGG 61.904 63.158 0.00 0.00 39.03 3.95
1687 1872 0.816018 ATGTCGGCGACACCACAAAA 60.816 50.000 41.05 19.19 45.65 2.44
1760 1945 0.745845 GTCAGGAGTGCGCATCCATT 60.746 55.000 28.69 14.57 39.47 3.16
1819 2010 2.050077 GCCACAGAAACCAAGCGC 60.050 61.111 0.00 0.00 0.00 5.92
1833 2024 1.422977 TACCCTTGGTTGAGCTGCCA 61.423 55.000 0.00 0.00 37.09 4.92
1852 2043 1.215423 ACTCAAACAACCTCCTGCCTT 59.785 47.619 0.00 0.00 0.00 4.35
1854 2045 1.692411 AACTCAAACAACCTCCTGCC 58.308 50.000 0.00 0.00 0.00 4.85
1894 2085 2.590821 GGCCTTGTAATCCTGCATCAT 58.409 47.619 0.00 0.00 0.00 2.45
1948 2139 1.875963 GTGATGCCTCAACCGTTGG 59.124 57.895 11.35 2.57 31.85 3.77
1987 2178 4.116961 GGTGTTTTCTTTTTCCCTTTCCG 58.883 43.478 0.00 0.00 0.00 4.30
1989 2180 3.554324 GCGGTGTTTTCTTTTTCCCTTTC 59.446 43.478 0.00 0.00 0.00 2.62
2016 2207 3.713858 TTGAACCATTGCACTGTTGAG 57.286 42.857 3.14 0.00 0.00 3.02
2155 2346 1.117150 TGGGGAGTAAGCGACATACC 58.883 55.000 0.00 0.00 0.00 2.73
2390 2595 6.909357 GCAAGACCGAAGATCTCATTATTTTG 59.091 38.462 0.00 0.00 0.00 2.44
2393 2598 5.923204 AGCAAGACCGAAGATCTCATTATT 58.077 37.500 0.00 0.00 0.00 1.40
2396 2601 3.736433 CGAGCAAGACCGAAGATCTCATT 60.736 47.826 0.00 0.00 0.00 2.57
2420 2625 4.260334 GCCAAAAGCATTCACTCAAACAAC 60.260 41.667 0.00 0.00 42.97 3.32
2474 2680 5.824904 AATGCAGCAACTAACATCTAAGG 57.175 39.130 0.00 0.00 0.00 2.69
2475 2681 9.282247 CTAAAAATGCAGCAACTAACATCTAAG 57.718 33.333 0.00 0.00 0.00 2.18
2489 2695 5.695816 TCATTTCCACAACTAAAAATGCAGC 59.304 36.000 0.00 0.00 38.42 5.25
2587 2794 7.656137 TGCTATAGCCTATAAGCAACAAGTAAC 59.344 37.037 21.84 0.00 41.18 2.50
2633 2840 2.608506 CCGGTGAAGACACGTTGACATA 60.609 50.000 0.00 0.00 46.77 2.29
2674 2881 1.539065 GCAGCACTAGACACACACAGT 60.539 52.381 0.00 0.00 0.00 3.55
2677 2884 1.528586 CTTGCAGCACTAGACACACAC 59.471 52.381 0.00 0.00 0.00 3.82
2707 2914 3.851098 ACGTGCATAGAGGTTCTTTCTC 58.149 45.455 0.00 0.00 0.00 2.87
2732 2939 2.092753 AGCCAATACTCCTGACACATGG 60.093 50.000 0.00 0.00 0.00 3.66
2781 2988 1.888512 ACATGTCAAATCCTGGCACAC 59.111 47.619 0.00 0.00 44.09 3.82
2782 2989 2.291209 ACATGTCAAATCCTGGCACA 57.709 45.000 0.00 0.00 44.09 4.57
2783 2990 3.665745 AAACATGTCAAATCCTGGCAC 57.334 42.857 0.00 0.00 44.09 5.01
2784 2991 4.686191 AAAAACATGTCAAATCCTGGCA 57.314 36.364 0.00 0.00 45.74 4.92
2817 3025 2.606725 CAGCACATCTTCAAGTCGATCC 59.393 50.000 0.00 0.00 0.00 3.36
2870 3078 5.463061 CCAACACAATGCTTCGAAAAGAAAT 59.537 36.000 0.00 0.00 38.57 2.17
2872 3080 4.142271 ACCAACACAATGCTTCGAAAAGAA 60.142 37.500 0.00 0.00 34.14 2.52
2874 3082 3.705604 ACCAACACAATGCTTCGAAAAG 58.294 40.909 0.00 0.00 35.47 2.27
2879 3088 2.731968 GCCATACCAACACAATGCTTCG 60.732 50.000 0.00 0.00 0.00 3.79
2907 3116 4.348656 CCAATGACAAAGCATCGAGAATG 58.651 43.478 0.00 0.00 38.50 2.67
2938 3147 1.669265 GAAAAGATAAACCCGGCCTCG 59.331 52.381 0.00 0.00 0.00 4.63
2963 3172 2.887152 GGGGGCATTTAGTATCAAGCTG 59.113 50.000 0.00 0.00 0.00 4.24
3024 3234 3.874316 AGCACTCCCTCCAATCCATATA 58.126 45.455 0.00 0.00 0.00 0.86
3033 3244 0.112412 GGGAAAAAGCACTCCCTCCA 59.888 55.000 0.00 0.00 46.91 3.86
3040 3251 5.104318 TGTTATTTTTGGGGGAAAAAGCACT 60.104 36.000 0.00 0.00 44.76 4.40
3047 3258 4.041075 GGAGCTTGTTATTTTTGGGGGAAA 59.959 41.667 0.00 0.00 0.00 3.13
3048 3259 3.580895 GGAGCTTGTTATTTTTGGGGGAA 59.419 43.478 0.00 0.00 0.00 3.97
3049 3260 3.169908 GGAGCTTGTTATTTTTGGGGGA 58.830 45.455 0.00 0.00 0.00 4.81
3053 3264 4.616953 ACGTTGGAGCTTGTTATTTTTGG 58.383 39.130 0.00 0.00 0.00 3.28
3054 3265 6.475402 AGAAACGTTGGAGCTTGTTATTTTTG 59.525 34.615 0.00 0.00 0.00 2.44
3055 3266 6.475402 CAGAAACGTTGGAGCTTGTTATTTTT 59.525 34.615 0.00 0.00 0.00 1.94
3056 3267 5.977129 CAGAAACGTTGGAGCTTGTTATTTT 59.023 36.000 0.00 0.00 0.00 1.82
3057 3268 5.067283 ACAGAAACGTTGGAGCTTGTTATTT 59.933 36.000 0.00 0.00 0.00 1.40
3058 3269 4.578928 ACAGAAACGTTGGAGCTTGTTATT 59.421 37.500 0.00 0.00 0.00 1.40
3059 3270 4.134563 ACAGAAACGTTGGAGCTTGTTAT 58.865 39.130 0.00 0.00 0.00 1.89
3060 3271 3.537580 ACAGAAACGTTGGAGCTTGTTA 58.462 40.909 0.00 0.00 0.00 2.41
3061 3272 2.365582 ACAGAAACGTTGGAGCTTGTT 58.634 42.857 0.00 0.00 0.00 2.83
3062 3273 2.038387 ACAGAAACGTTGGAGCTTGT 57.962 45.000 0.00 0.00 0.00 3.16
3063 3274 2.869801 TGTACAGAAACGTTGGAGCTTG 59.130 45.455 0.00 0.00 0.00 4.01
3064 3275 3.188159 TGTACAGAAACGTTGGAGCTT 57.812 42.857 0.00 0.00 0.00 3.74
3065 3276 2.902705 TGTACAGAAACGTTGGAGCT 57.097 45.000 0.00 0.00 0.00 4.09
3066 3277 4.483476 AAATGTACAGAAACGTTGGAGC 57.517 40.909 0.00 0.00 0.00 4.70
3067 3278 6.780706 AGTAAATGTACAGAAACGTTGGAG 57.219 37.500 0.00 0.00 32.12 3.86
3068 3279 6.539464 ACAAGTAAATGTACAGAAACGTTGGA 59.461 34.615 0.00 0.00 32.12 3.53
3069 3280 6.631238 CACAAGTAAATGTACAGAAACGTTGG 59.369 38.462 0.00 0.00 32.12 3.77
3070 3281 6.140108 GCACAAGTAAATGTACAGAAACGTTG 59.860 38.462 0.00 3.69 32.12 4.10
3071 3282 6.196571 GCACAAGTAAATGTACAGAAACGTT 58.803 36.000 0.33 0.00 32.12 3.99
3072 3283 5.557514 CGCACAAGTAAATGTACAGAAACGT 60.558 40.000 0.33 0.00 32.12 3.99
3073 3284 4.838642 CGCACAAGTAAATGTACAGAAACG 59.161 41.667 0.33 0.00 32.12 3.60
3074 3285 5.144359 CCGCACAAGTAAATGTACAGAAAC 58.856 41.667 0.33 0.00 32.12 2.78
3075 3286 4.817464 ACCGCACAAGTAAATGTACAGAAA 59.183 37.500 0.33 0.00 32.12 2.52
3076 3287 4.382291 ACCGCACAAGTAAATGTACAGAA 58.618 39.130 0.33 0.00 32.12 3.02
3077 3288 3.997762 ACCGCACAAGTAAATGTACAGA 58.002 40.909 0.33 0.00 32.12 3.41
3078 3289 4.024387 ACAACCGCACAAGTAAATGTACAG 60.024 41.667 0.33 0.00 32.12 2.74
3079 3290 3.878103 ACAACCGCACAAGTAAATGTACA 59.122 39.130 0.00 0.00 32.12 2.90
3080 3291 4.477302 ACAACCGCACAAGTAAATGTAC 57.523 40.909 0.00 0.00 30.84 2.90
3081 3292 4.451774 GGTACAACCGCACAAGTAAATGTA 59.548 41.667 0.00 0.00 30.84 2.29
3082 3293 3.251487 GGTACAACCGCACAAGTAAATGT 59.749 43.478 0.00 0.00 0.00 2.71
3083 3294 3.251245 TGGTACAACCGCACAAGTAAATG 59.749 43.478 0.00 0.00 42.58 2.32
3084 3295 3.478509 TGGTACAACCGCACAAGTAAAT 58.521 40.909 0.00 0.00 42.58 1.40
3085 3296 2.915349 TGGTACAACCGCACAAGTAAA 58.085 42.857 0.00 0.00 42.58 2.01
3086 3297 2.616634 TGGTACAACCGCACAAGTAA 57.383 45.000 0.00 0.00 42.58 2.24
3099 3310 7.506114 AGACTACAGAAAGAAATGTTGGTACA 58.494 34.615 0.00 0.00 38.95 2.90
3100 3311 7.964604 AGACTACAGAAAGAAATGTTGGTAC 57.035 36.000 0.00 0.00 0.00 3.34
3101 3312 9.485206 GTAAGACTACAGAAAGAAATGTTGGTA 57.515 33.333 0.00 0.00 0.00 3.25
3102 3313 8.211629 AGTAAGACTACAGAAAGAAATGTTGGT 58.788 33.333 0.00 0.00 0.00 3.67
3103 3314 8.608844 AGTAAGACTACAGAAAGAAATGTTGG 57.391 34.615 0.00 0.00 0.00 3.77
3110 3321 9.517868 AGCTAGTTAGTAAGACTACAGAAAGAA 57.482 33.333 0.00 0.00 28.93 2.52
3114 3325 9.393512 CCTTAGCTAGTTAGTAAGACTACAGAA 57.606 37.037 0.00 0.00 28.93 3.02
3115 3326 8.547173 ACCTTAGCTAGTTAGTAAGACTACAGA 58.453 37.037 0.00 0.00 28.93 3.41
3116 3327 8.735692 ACCTTAGCTAGTTAGTAAGACTACAG 57.264 38.462 0.00 0.00 28.93 2.74
3120 3331 9.752228 AACTTACCTTAGCTAGTTAGTAAGACT 57.248 33.333 25.29 16.05 39.18 3.24
3129 3340 8.727910 GCACAAAATAACTTACCTTAGCTAGTT 58.272 33.333 3.03 3.03 35.25 2.24
3130 3341 8.101419 AGCACAAAATAACTTACCTTAGCTAGT 58.899 33.333 0.00 0.00 0.00 2.57
3131 3342 8.494016 AGCACAAAATAACTTACCTTAGCTAG 57.506 34.615 0.00 0.00 0.00 3.42
3132 3343 9.595823 CTAGCACAAAATAACTTACCTTAGCTA 57.404 33.333 0.00 0.00 0.00 3.32
3133 3344 8.101419 ACTAGCACAAAATAACTTACCTTAGCT 58.899 33.333 0.00 0.00 0.00 3.32
3134 3345 8.265165 ACTAGCACAAAATAACTTACCTTAGC 57.735 34.615 0.00 0.00 0.00 3.09
3135 3346 9.654663 AGACTAGCACAAAATAACTTACCTTAG 57.345 33.333 0.00 0.00 0.00 2.18
3136 3347 9.649167 GAGACTAGCACAAAATAACTTACCTTA 57.351 33.333 0.00 0.00 0.00 2.69
3137 3348 7.606839 GGAGACTAGCACAAAATAACTTACCTT 59.393 37.037 0.00 0.00 0.00 3.50
3138 3349 7.104290 GGAGACTAGCACAAAATAACTTACCT 58.896 38.462 0.00 0.00 0.00 3.08
3139 3350 6.877322 TGGAGACTAGCACAAAATAACTTACC 59.123 38.462 0.00 0.00 0.00 2.85
3140 3351 7.900782 TGGAGACTAGCACAAAATAACTTAC 57.099 36.000 0.00 0.00 0.00 2.34
3141 3352 9.162764 GATTGGAGACTAGCACAAAATAACTTA 57.837 33.333 0.00 0.00 0.00 2.24
3142 3353 7.885399 AGATTGGAGACTAGCACAAAATAACTT 59.115 33.333 0.00 0.00 0.00 2.66
3143 3354 7.398024 AGATTGGAGACTAGCACAAAATAACT 58.602 34.615 0.00 0.00 0.00 2.24
3144 3355 7.550906 AGAGATTGGAGACTAGCACAAAATAAC 59.449 37.037 0.00 0.00 0.00 1.89
3145 3356 7.624549 AGAGATTGGAGACTAGCACAAAATAA 58.375 34.615 0.00 0.00 0.00 1.40
3146 3357 7.187824 AGAGATTGGAGACTAGCACAAAATA 57.812 36.000 0.00 0.00 0.00 1.40
3147 3358 6.059787 AGAGATTGGAGACTAGCACAAAAT 57.940 37.500 0.00 0.00 0.00 1.82
3148 3359 5.489792 AGAGATTGGAGACTAGCACAAAA 57.510 39.130 0.00 0.00 0.00 2.44
3149 3360 5.489792 AAGAGATTGGAGACTAGCACAAA 57.510 39.130 0.00 0.00 0.00 2.83
3150 3361 5.489792 AAAGAGATTGGAGACTAGCACAA 57.510 39.130 0.00 0.00 0.00 3.33
3151 3362 5.489792 AAAAGAGATTGGAGACTAGCACA 57.510 39.130 0.00 0.00 0.00 4.57
3152 3363 6.175712 CAAAAAGAGATTGGAGACTAGCAC 57.824 41.667 0.00 0.00 0.00 4.40
3163 3374 5.835257 ACACATGACACCAAAAAGAGATTG 58.165 37.500 0.00 0.00 0.00 2.67
3164 3375 6.127366 ACAACACATGACACCAAAAAGAGATT 60.127 34.615 0.00 0.00 0.00 2.40
3165 3376 5.360714 ACAACACATGACACCAAAAAGAGAT 59.639 36.000 0.00 0.00 0.00 2.75
3179 3662 7.151308 AGTTTCAAACTTCAAACAACACATGA 58.849 30.769 0.00 0.00 39.04 3.07
3283 3766 1.551452 AGGTGCACTCTGGACTAGAC 58.449 55.000 17.98 0.00 38.83 2.59
3286 3769 2.047061 ACAAAGGTGCACTCTGGACTA 58.953 47.619 17.98 0.00 38.83 2.59
3370 3853 1.196127 GTTTAGGGTTTCAACGAGGCG 59.804 52.381 0.00 0.00 0.00 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.