Multiple sequence alignment - TraesCS7D01G458200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G458200 chr7D 100.000 5845 0 0 1 5845 576172719 576178563 0.000000e+00 10794.0
1 TraesCS7D01G458200 chr7D 100.000 42 0 0 5148 5189 576177809 576177850 1.750000e-10 78.7
2 TraesCS7D01G458200 chr7D 100.000 42 0 0 5091 5132 576177866 576177907 1.750000e-10 78.7
3 TraesCS7D01G458200 chr7B 92.271 2096 124 12 2740 4810 638487097 638489179 0.000000e+00 2939.0
4 TraesCS7D01G458200 chr7B 85.502 1814 169 46 876 2641 638485241 638487008 0.000000e+00 1807.0
5 TraesCS7D01G458200 chr7B 93.262 282 19 0 5449 5730 638498911 638498630 3.260000e-112 416.0
6 TraesCS7D01G458200 chr7B 86.111 288 34 3 4811 5096 638489301 638489584 7.360000e-79 305.0
7 TraesCS7D01G458200 chr7A 92.558 2029 95 19 2704 4693 666987933 666989944 0.000000e+00 2859.0
8 TraesCS7D01G458200 chr7A 91.464 1851 123 16 825 2650 666986084 666987924 0.000000e+00 2510.0
9 TraesCS7D01G458200 chr7A 91.791 268 12 4 4696 4959 666990020 666990281 1.200000e-96 364.0
10 TraesCS7D01G458200 chr7A 95.111 225 3 4 5 225 666983998 666984218 1.210000e-91 348.0
11 TraesCS7D01G458200 chr7A 91.156 147 11 1 4973 5117 666991884 666992030 1.280000e-46 198.0
12 TraesCS7D01G458200 chr7A 87.931 116 10 3 5181 5293 666994469 666994583 3.670000e-27 134.0
13 TraesCS7D01G458200 chr7A 93.333 75 2 1 5659 5730 666994930 666995004 2.230000e-19 108.0
14 TraesCS7D01G458200 chr5A 98.291 117 2 0 5729 5845 567897816 567897932 7.680000e-49 206.0
15 TraesCS7D01G458200 chr5A 98.261 115 2 0 5731 5845 567899448 567899562 9.930000e-48 202.0
16 TraesCS7D01G458200 chr5A 97.674 43 1 0 2663 2705 444560897 444560855 2.260000e-09 75.0
17 TraesCS7D01G458200 chr3A 96.000 125 5 0 5721 5845 586072900 586073024 2.760000e-48 204.0
18 TraesCS7D01G458200 chr3A 98.261 115 2 0 5731 5845 586074280 586074394 9.930000e-48 202.0
19 TraesCS7D01G458200 chr6A 98.261 115 2 0 5731 5845 601683049 601682935 9.930000e-48 202.0
20 TraesCS7D01G458200 chr6A 92.683 82 6 0 3409 3490 119611218 119611137 1.030000e-22 119.0
21 TraesCS7D01G458200 chr6A 92.000 50 4 0 2664 2713 604571359 604571310 2.920000e-08 71.3
22 TraesCS7D01G458200 chr3D 98.261 115 2 0 5731 5845 144283295 144283409 9.930000e-48 202.0
23 TraesCS7D01G458200 chr3D 97.674 43 1 0 2663 2705 30004962 30005004 2.260000e-09 75.0
24 TraesCS7D01G458200 chr3D 93.750 48 3 0 2663 2710 560476163 560476116 8.120000e-09 73.1
25 TraesCS7D01G458200 chr2D 98.261 115 2 0 5731 5845 152632210 152632324 9.930000e-48 202.0
26 TraesCS7D01G458200 chr2D 100.000 31 0 0 5066 5096 46372188 46372158 2.280000e-04 58.4
27 TraesCS7D01G458200 chr1A 98.261 115 2 0 5731 5845 380321670 380321784 9.930000e-48 202.0
28 TraesCS7D01G458200 chr1A 98.261 115 2 0 5731 5845 380323011 380323125 9.930000e-48 202.0
29 TraesCS7D01G458200 chr6D 76.285 253 43 15 3409 3650 99570091 99569845 1.030000e-22 119.0
30 TraesCS7D01G458200 chr6B 92.683 82 6 0 3409 3490 183717982 183717901 1.030000e-22 119.0
31 TraesCS7D01G458200 chr6B 89.744 78 7 1 4309 4386 183716838 183716762 1.340000e-16 99.0
32 TraesCS7D01G458200 chrUn 97.674 43 1 0 2663 2705 376482448 376482490 2.260000e-09 75.0
33 TraesCS7D01G458200 chr5D 97.674 43 1 0 2663 2705 408787891 408787933 2.260000e-09 75.0
34 TraesCS7D01G458200 chr5D 93.750 48 3 0 2663 2710 436580050 436580097 8.120000e-09 73.1
35 TraesCS7D01G458200 chr5B 95.652 46 2 0 2663 2708 706306921 706306876 2.260000e-09 75.0
36 TraesCS7D01G458200 chr4A 95.745 47 1 1 2660 2705 608607644 608607690 2.260000e-09 75.0
37 TraesCS7D01G458200 chr2A 90.385 52 3 2 799 850 612828213 612828262 3.780000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G458200 chr7D 576172719 576178563 5844 False 3650.466667 10794 100.000000 1 5845 3 chr7D.!!$F1 5844
1 TraesCS7D01G458200 chr7B 638485241 638489584 4343 False 1683.666667 2939 87.961333 876 5096 3 chr7B.!!$F1 4220
2 TraesCS7D01G458200 chr7A 666983998 666995004 11006 False 931.571429 2859 91.906286 5 5730 7 chr7A.!!$F1 5725
3 TraesCS7D01G458200 chr5A 567897816 567899562 1746 False 204.000000 206 98.276000 5729 5845 2 chr5A.!!$F1 116
4 TraesCS7D01G458200 chr3A 586072900 586074394 1494 False 203.000000 204 97.130500 5721 5845 2 chr3A.!!$F1 124
5 TraesCS7D01G458200 chr1A 380321670 380323125 1455 False 202.000000 202 98.261000 5731 5845 2 chr1A.!!$F1 114

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
941 2304 0.179134 GTGAGAATCTGACCGACCGG 60.179 60.000 6.94 6.94 37.37 5.28 F
1928 3340 0.679002 CTGGGATTGGTGCACAGAGG 60.679 60.000 20.43 0.00 0.00 3.69 F
2183 3598 0.038166 AGTCATCCGGTTGGTTGCAT 59.962 50.000 12.54 0.00 35.32 3.96 F
3102 4550 0.555769 ACCCCAGAAAAGTTGCAGGA 59.444 50.000 0.00 0.00 0.00 3.86 F
3105 4553 1.000171 CCCAGAAAAGTTGCAGGAAGC 60.000 52.381 0.00 0.00 45.96 3.86 F
3299 4760 1.881973 TCATGAAGCAGGTCTGTTTGC 59.118 47.619 4.84 0.00 40.57 3.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1957 3369 0.109039 GTCAGTCCTTGTCTCGGCTC 60.109 60.000 0.00 0.0 0.00 4.70 R
3299 4760 0.549950 AGAATGTCCATGGGCTGAGG 59.450 55.000 19.09 0.0 0.00 3.86 R
3389 4850 1.130054 AAGCAGGGACAGGCTTCAGA 61.130 55.000 0.00 0.0 45.51 3.27 R
4581 6070 0.469144 GAAGCTCCTCTCCCTCGGAT 60.469 60.000 0.00 0.0 0.00 4.18 R
4657 6146 1.404391 GCCAGAGTAGTAGTAAGCGCA 59.596 52.381 11.47 0.0 0.00 6.09 R
5199 10862 0.036875 AGGAGAAAAGGTTCAGGCGG 59.963 55.000 0.00 0.0 36.09 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 2.841215 TGGTAGCAACTTAAGCGTGTT 58.159 42.857 1.29 1.98 37.01 3.32
74 78 6.369005 CAACTTAGCATGTCTCAAAGTTCAG 58.631 40.000 11.72 3.76 38.08 3.02
126 131 4.430137 TTATCTGAACGACGTTAGCTGT 57.570 40.909 14.20 2.09 0.00 4.40
127 132 5.550232 TTATCTGAACGACGTTAGCTGTA 57.450 39.130 14.20 1.14 0.00 2.74
128 133 4.634184 ATCTGAACGACGTTAGCTGTAT 57.366 40.909 14.20 0.00 0.00 2.29
129 134 4.430137 TCTGAACGACGTTAGCTGTATT 57.570 40.909 14.20 0.00 0.00 1.89
236 241 3.944476 GGTGACCACTGATTGAGCT 57.056 52.632 0.00 0.00 0.00 4.09
237 242 2.191128 GGTGACCACTGATTGAGCTT 57.809 50.000 0.00 0.00 0.00 3.74
240 245 1.699083 TGACCACTGATTGAGCTTGGA 59.301 47.619 5.36 0.00 0.00 3.53
241 246 2.306805 TGACCACTGATTGAGCTTGGAT 59.693 45.455 5.36 0.00 0.00 3.41
242 247 3.519107 TGACCACTGATTGAGCTTGGATA 59.481 43.478 5.36 0.00 0.00 2.59
243 248 4.164796 TGACCACTGATTGAGCTTGGATAT 59.835 41.667 5.36 0.00 0.00 1.63
244 249 5.366477 TGACCACTGATTGAGCTTGGATATA 59.634 40.000 5.36 0.00 0.00 0.86
245 250 6.043590 TGACCACTGATTGAGCTTGGATATAT 59.956 38.462 5.36 0.00 0.00 0.86
246 251 7.235399 TGACCACTGATTGAGCTTGGATATATA 59.765 37.037 5.36 0.00 0.00 0.86
247 252 8.155620 ACCACTGATTGAGCTTGGATATATAT 57.844 34.615 5.36 0.00 0.00 0.86
248 253 9.271921 ACCACTGATTGAGCTTGGATATATATA 57.728 33.333 5.36 0.00 0.00 0.86
325 330 4.329545 ACCCGCTGCCAACACGAT 62.330 61.111 0.00 0.00 0.00 3.73
326 331 2.125310 CCCGCTGCCAACACGATA 60.125 61.111 0.00 0.00 0.00 2.92
354 359 8.246180 ACTTGCAACATAATAGAAATTCACCTG 58.754 33.333 0.00 0.00 0.00 4.00
376 381 1.204467 CCACAATTTAGCGCCAACCAT 59.796 47.619 2.29 0.00 0.00 3.55
403 408 0.958091 TTCGCCAACCAATTCACCTG 59.042 50.000 0.00 0.00 0.00 4.00
406 411 0.240945 GCCAACCAATTCACCTGACG 59.759 55.000 0.00 0.00 0.00 4.35
431 436 9.825972 CGTAGTGTTTTGATGATTTAGATTTGT 57.174 29.630 0.00 0.00 0.00 2.83
435 440 9.993881 GTGTTTTGATGATTTAGATTTGTTTCG 57.006 29.630 0.00 0.00 0.00 3.46
436 441 8.698854 TGTTTTGATGATTTAGATTTGTTTCGC 58.301 29.630 0.00 0.00 0.00 4.70
437 442 7.810766 TTTGATGATTTAGATTTGTTTCGCC 57.189 32.000 0.00 0.00 0.00 5.54
438 443 6.507958 TGATGATTTAGATTTGTTTCGCCA 57.492 33.333 0.00 0.00 0.00 5.69
439 444 6.918626 TGATGATTTAGATTTGTTTCGCCAA 58.081 32.000 0.00 0.00 0.00 4.52
440 445 7.374272 TGATGATTTAGATTTGTTTCGCCAAA 58.626 30.769 0.00 0.00 38.58 3.28
441 446 8.034215 TGATGATTTAGATTTGTTTCGCCAAAT 58.966 29.630 7.09 7.09 45.29 2.32
442 447 9.515020 GATGATTTAGATTTGTTTCGCCAAATA 57.485 29.630 7.28 0.00 43.28 1.40
451 460 6.618287 TTGTTTCGCCAAATATGAGGATAG 57.382 37.500 0.00 0.00 0.00 2.08
455 464 4.507710 TCGCCAAATATGAGGATAGCATC 58.492 43.478 0.00 0.00 0.00 3.91
478 487 7.194112 TCATATAGGTTGGAAATCACACAGA 57.806 36.000 0.00 0.00 0.00 3.41
479 488 7.805163 TCATATAGGTTGGAAATCACACAGAT 58.195 34.615 0.00 0.00 39.09 2.90
502 511 8.921205 AGATTTAGCTTTTCAATGCATCCTTAT 58.079 29.630 0.00 0.00 0.00 1.73
519 529 7.201350 GCATCCTTATTTGTTTTACTTGAAGCG 60.201 37.037 0.00 0.00 0.00 4.68
559 569 2.480845 CGTTTCAACTTCGGTCCTTCT 58.519 47.619 0.00 0.00 0.00 2.85
560 570 2.221055 CGTTTCAACTTCGGTCCTTCTG 59.779 50.000 0.00 0.00 0.00 3.02
561 571 2.543777 TTCAACTTCGGTCCTTCTGG 57.456 50.000 0.00 0.00 0.00 3.86
562 572 1.420430 TCAACTTCGGTCCTTCTGGT 58.580 50.000 0.00 0.00 34.23 4.00
563 573 2.600790 TCAACTTCGGTCCTTCTGGTA 58.399 47.619 0.00 0.00 34.23 3.25
564 574 2.561419 TCAACTTCGGTCCTTCTGGTAG 59.439 50.000 0.00 0.00 34.23 3.18
565 575 2.299297 CAACTTCGGTCCTTCTGGTAGT 59.701 50.000 0.00 0.00 34.23 2.73
566 576 2.169330 ACTTCGGTCCTTCTGGTAGTC 58.831 52.381 0.00 0.00 34.23 2.59
568 578 2.297698 TCGGTCCTTCTGGTAGTCAA 57.702 50.000 0.00 0.00 34.23 3.18
569 579 2.816411 TCGGTCCTTCTGGTAGTCAAT 58.184 47.619 0.00 0.00 34.23 2.57
570 580 2.758979 TCGGTCCTTCTGGTAGTCAATC 59.241 50.000 0.00 0.00 34.23 2.67
571 581 2.159085 CGGTCCTTCTGGTAGTCAATCC 60.159 54.545 0.00 0.00 34.23 3.01
572 582 2.159085 GGTCCTTCTGGTAGTCAATCCG 60.159 54.545 0.00 0.00 34.23 4.18
574 584 3.194968 GTCCTTCTGGTAGTCAATCCGAA 59.805 47.826 0.00 0.00 34.23 4.30
575 585 4.030913 TCCTTCTGGTAGTCAATCCGAAT 58.969 43.478 0.00 0.00 34.23 3.34
576 586 4.099573 TCCTTCTGGTAGTCAATCCGAATC 59.900 45.833 0.00 0.00 34.23 2.52
577 587 4.372656 CTTCTGGTAGTCAATCCGAATCC 58.627 47.826 0.00 0.00 0.00 3.01
578 588 2.361119 TCTGGTAGTCAATCCGAATCCG 59.639 50.000 0.00 0.00 0.00 4.18
605 615 6.360618 AGGGAATATCTTGTGTTCCATCTTC 58.639 40.000 5.81 0.00 46.73 2.87
615 625 3.433615 GTGTTCCATCTTCGTTCTCCTTG 59.566 47.826 0.00 0.00 0.00 3.61
616 626 3.071023 TGTTCCATCTTCGTTCTCCTTGT 59.929 43.478 0.00 0.00 0.00 3.16
626 636 4.893608 TCGTTCTCCTTGTTTGATGATGA 58.106 39.130 0.00 0.00 0.00 2.92
633 643 4.782691 TCCTTGTTTGATGATGACCTCCTA 59.217 41.667 0.00 0.00 0.00 2.94
649 659 3.433740 CCTCCTATGCCTCAAACCTAACC 60.434 52.174 0.00 0.00 0.00 2.85
653 663 5.063880 CCTATGCCTCAAACCTAACCATAC 58.936 45.833 0.00 0.00 0.00 2.39
657 667 4.521256 TGCCTCAAACCTAACCATACAAAC 59.479 41.667 0.00 0.00 0.00 2.93
661 671 7.627726 GCCTCAAACCTAACCATACAAACATAC 60.628 40.741 0.00 0.00 0.00 2.39
664 674 8.788806 TCAAACCTAACCATACAAACATACAAG 58.211 33.333 0.00 0.00 0.00 3.16
689 699 6.727215 GGTCTAGACCGTATAAAGTCTTCAG 58.273 44.000 25.83 4.71 40.43 3.02
711 724 4.578928 AGCATTTAAGTTGTCAAACTCGGT 59.421 37.500 0.00 0.00 46.15 4.69
719 732 3.371102 TGTCAAACTCGGTCAAGAGAG 57.629 47.619 0.62 0.00 40.57 3.20
721 734 2.296471 GTCAAACTCGGTCAAGAGAGGA 59.704 50.000 0.62 0.00 40.57 3.71
725 738 2.808919 ACTCGGTCAAGAGAGGATTCA 58.191 47.619 0.62 0.00 40.57 2.57
726 739 3.165875 ACTCGGTCAAGAGAGGATTCAA 58.834 45.455 0.62 0.00 40.57 2.69
736 752 7.277539 GTCAAGAGAGGATTCAATGTTCTAGTG 59.722 40.741 0.00 0.00 0.00 2.74
738 754 4.775236 AGAGGATTCAATGTTCTAGTGGC 58.225 43.478 0.00 0.00 0.00 5.01
739 755 4.472833 AGAGGATTCAATGTTCTAGTGGCT 59.527 41.667 0.00 0.00 0.00 4.75
746 762 2.434185 TTCTAGTGGCTTGGCGCG 60.434 61.111 0.00 0.00 40.44 6.86
754 770 4.389576 GCTTGGCGCGTGTCCTTG 62.390 66.667 8.43 0.00 0.00 3.61
760 776 0.179200 GGCGCGTGTCCTTGTAATTG 60.179 55.000 8.43 0.00 0.00 2.32
761 777 0.793861 GCGCGTGTCCTTGTAATTGA 59.206 50.000 8.43 0.00 0.00 2.57
764 780 2.147958 GCGTGTCCTTGTAATTGACCA 58.852 47.619 0.00 0.00 0.00 4.02
765 781 2.159627 GCGTGTCCTTGTAATTGACCAG 59.840 50.000 0.00 0.00 0.00 4.00
766 782 2.742053 CGTGTCCTTGTAATTGACCAGG 59.258 50.000 0.00 0.00 41.52 4.45
767 783 3.751518 GTGTCCTTGTAATTGACCAGGT 58.248 45.455 0.00 0.00 41.05 4.00
768 784 3.502211 GTGTCCTTGTAATTGACCAGGTG 59.498 47.826 0.00 0.00 41.05 4.00
769 785 3.137544 TGTCCTTGTAATTGACCAGGTGT 59.862 43.478 0.00 0.00 41.05 4.16
770 786 3.502211 GTCCTTGTAATTGACCAGGTGTG 59.498 47.826 0.00 0.00 41.05 3.82
771 787 3.137544 TCCTTGTAATTGACCAGGTGTGT 59.862 43.478 0.00 0.00 41.05 3.72
772 788 4.348461 TCCTTGTAATTGACCAGGTGTGTA 59.652 41.667 0.00 0.00 41.05 2.90
773 789 4.695455 CCTTGTAATTGACCAGGTGTGTAG 59.305 45.833 0.00 0.00 36.41 2.74
775 791 5.755409 TGTAATTGACCAGGTGTGTAGAT 57.245 39.130 0.00 0.00 0.00 1.98
776 792 5.730550 TGTAATTGACCAGGTGTGTAGATC 58.269 41.667 0.00 0.00 0.00 2.75
778 794 5.441718 AATTGACCAGGTGTGTAGATCAT 57.558 39.130 0.00 0.00 0.00 2.45
779 795 4.908601 TTGACCAGGTGTGTAGATCATT 57.091 40.909 0.00 0.00 0.00 2.57
781 797 5.598416 TGACCAGGTGTGTAGATCATTAG 57.402 43.478 0.00 0.00 0.00 1.73
783 799 3.134804 ACCAGGTGTGTAGATCATTAGGC 59.865 47.826 0.00 0.00 0.00 3.93
784 800 3.389329 CCAGGTGTGTAGATCATTAGGCT 59.611 47.826 0.00 0.00 0.00 4.58
786 802 5.070446 CCAGGTGTGTAGATCATTAGGCTTA 59.930 44.000 0.00 0.00 0.00 3.09
787 803 6.239714 CCAGGTGTGTAGATCATTAGGCTTAT 60.240 42.308 0.00 0.00 0.00 1.73
788 804 6.870965 CAGGTGTGTAGATCATTAGGCTTATC 59.129 42.308 0.00 0.00 0.00 1.75
791 807 7.600752 GGTGTGTAGATCATTAGGCTTATCTTC 59.399 40.741 0.00 0.00 31.38 2.87
793 809 9.588096 TGTGTAGATCATTAGGCTTATCTTCTA 57.412 33.333 0.00 0.00 31.38 2.10
804 2166 6.767456 AGGCTTATCTTCTAGTCCATGATTG 58.233 40.000 0.00 0.00 0.00 2.67
812 2174 8.774546 TCTTCTAGTCCATGATTGAAGATAGT 57.225 34.615 12.03 0.00 36.17 2.12
813 2175 8.637099 TCTTCTAGTCCATGATTGAAGATAGTG 58.363 37.037 12.03 0.00 36.17 2.74
814 2176 7.904558 TCTAGTCCATGATTGAAGATAGTGT 57.095 36.000 0.00 0.00 0.00 3.55
815 2177 7.946207 TCTAGTCCATGATTGAAGATAGTGTC 58.054 38.462 0.00 0.00 0.00 3.67
816 2178 5.595885 AGTCCATGATTGAAGATAGTGTCG 58.404 41.667 0.00 0.00 0.00 4.35
817 2179 5.360999 AGTCCATGATTGAAGATAGTGTCGA 59.639 40.000 0.00 0.00 0.00 4.20
818 2180 6.042777 GTCCATGATTGAAGATAGTGTCGAA 58.957 40.000 0.00 0.00 0.00 3.71
819 2181 6.535150 GTCCATGATTGAAGATAGTGTCGAAA 59.465 38.462 0.00 0.00 0.00 3.46
820 2182 7.064609 GTCCATGATTGAAGATAGTGTCGAAAA 59.935 37.037 0.00 0.00 0.00 2.29
821 2183 7.064609 TCCATGATTGAAGATAGTGTCGAAAAC 59.935 37.037 0.00 0.00 0.00 2.43
822 2184 7.148423 CCATGATTGAAGATAGTGTCGAAAACA 60.148 37.037 0.00 0.00 34.78 2.83
866 2228 9.449719 GGATGGAGTAGATTGAAAGTTTTCTTA 57.550 33.333 6.21 0.00 39.48 2.10
868 2230 9.793259 ATGGAGTAGATTGAAAGTTTTCTTACA 57.207 29.630 6.21 0.00 39.48 2.41
941 2304 0.179134 GTGAGAATCTGACCGACCGG 60.179 60.000 6.94 6.94 37.37 5.28
942 2305 1.227002 GAGAATCTGACCGACCGGC 60.227 63.158 8.55 2.35 39.32 6.13
1019 2382 1.056660 GGCGATTTCTATCCCCTCCA 58.943 55.000 0.00 0.00 0.00 3.86
1120 2490 2.503382 GCCCTCCCTGATCCGAGAC 61.503 68.421 3.73 0.00 0.00 3.36
1138 2508 1.153349 CCCAGAGAAGCCGGTAAGC 60.153 63.158 1.90 0.00 0.00 3.09
1253 2623 2.434185 CTGCCGCTCCGCTTGTTA 60.434 61.111 0.00 0.00 0.00 2.41
1267 2637 9.349145 GCTCCGCTTGTTAATTTTTATTTCTTA 57.651 29.630 0.00 0.00 0.00 2.10
1320 2699 6.377327 TTCTTGACTGACTTGATTGTTTCC 57.623 37.500 0.00 0.00 0.00 3.13
1333 2712 7.127955 ACTTGATTGTTTCCTATGGTATCCTCT 59.872 37.037 0.00 0.00 0.00 3.69
1353 2732 5.416271 TCTTCCTGATTAGTGGGTGTTAC 57.584 43.478 0.00 0.00 0.00 2.50
1381 2763 3.763902 TCTTTGAGCTCGATTCGAAGAG 58.236 45.455 18.72 7.03 39.18 2.85
1407 2789 2.796383 CGAGGAAAGATCGCCTGTGTAG 60.796 54.545 9.17 0.00 33.84 2.74
1465 2847 4.018050 AGACAGATGACCTATTTGGCCTTT 60.018 41.667 3.32 0.00 40.22 3.11
1491 2873 3.313791 TGACCCATCCAAGATCCGATTA 58.686 45.455 0.00 0.00 0.00 1.75
1493 2875 3.045634 ACCCATCCAAGATCCGATTACA 58.954 45.455 0.00 0.00 0.00 2.41
1563 2949 8.850156 CCTAGGTGGATTTGTTGGATATTTTAG 58.150 37.037 0.00 0.00 38.35 1.85
1603 2989 5.600484 AGGTATGTAGTCTGCAGCTTATCTT 59.400 40.000 9.47 5.46 0.00 2.40
1623 3009 1.642037 CTGCTGCGTGCTGTGCTTAT 61.642 55.000 0.00 0.00 43.37 1.73
1628 3014 2.416547 CTGCGTGCTGTGCTTATTAACT 59.583 45.455 0.00 0.00 0.00 2.24
1765 3177 4.296056 TCTATGGGGAGAAAAGAGGTACC 58.704 47.826 2.73 2.73 0.00 3.34
1818 3230 2.906389 TGTGAGGCAGAGGAATTACAGT 59.094 45.455 0.00 0.00 0.00 3.55
1920 3332 1.186917 TTGGCTTGCTGGGATTGGTG 61.187 55.000 0.00 0.00 0.00 4.17
1921 3333 2.575461 GCTTGCTGGGATTGGTGC 59.425 61.111 0.00 0.00 0.00 5.01
1922 3334 2.277591 GCTTGCTGGGATTGGTGCA 61.278 57.895 0.00 0.00 0.00 4.57
1926 3338 1.303561 GCTGGGATTGGTGCACAGA 60.304 57.895 20.43 6.51 0.00 3.41
1928 3340 0.679002 CTGGGATTGGTGCACAGAGG 60.679 60.000 20.43 0.00 0.00 3.69
1936 3348 2.922503 TGCACAGAGGCCGGAAGA 60.923 61.111 5.05 0.00 0.00 2.87
1957 3369 7.661847 GGAAGAATCCCATGTGTAGGTATTAAG 59.338 40.741 0.00 0.00 40.10 1.85
1958 3370 7.931015 AGAATCCCATGTGTAGGTATTAAGA 57.069 36.000 0.00 0.00 0.00 2.10
1959 3371 7.967908 AGAATCCCATGTGTAGGTATTAAGAG 58.032 38.462 0.00 0.00 0.00 2.85
1961 3373 4.347000 TCCCATGTGTAGGTATTAAGAGCC 59.653 45.833 0.00 0.00 0.00 4.70
1977 3390 0.540830 AGCCGAGACAAGGACTGACT 60.541 55.000 0.00 0.00 32.37 3.41
2022 3436 3.659195 TCCGGATATCTTCCTACTGGGTA 59.341 47.826 0.00 0.00 42.99 3.69
2040 3454 6.554982 ACTGGGTAGTTAAGATCTGCATATGA 59.445 38.462 6.97 0.00 31.66 2.15
2046 3460 9.071221 GTAGTTAAGATCTGCATATGAATCTCG 57.929 37.037 6.97 0.00 0.00 4.04
2049 3463 8.855279 GTTAAGATCTGCATATGAATCTCGTAC 58.145 37.037 6.97 6.68 0.00 3.67
2086 3500 5.238650 AGAACTTAGGAATTTGTGTGTTCCG 59.761 40.000 0.00 0.00 46.68 4.30
2090 3504 3.283751 AGGAATTTGTGTGTTCCGACAA 58.716 40.909 0.00 0.00 46.68 3.18
2150 3565 6.183360 ACAATCAGGCAAACATCAAAACACTA 60.183 34.615 0.00 0.00 0.00 2.74
2183 3598 0.038166 AGTCATCCGGTTGGTTGCAT 59.962 50.000 12.54 0.00 35.32 3.96
2234 3649 4.797868 TGTTTCTTTCTGTGTTTCAATGCG 59.202 37.500 0.00 0.00 0.00 4.73
2263 3678 5.763204 CCCTGTTTCTTGCAGTAACTTTCTA 59.237 40.000 8.49 0.00 32.41 2.10
2270 3685 7.672983 TCTTGCAGTAACTTTCTATCTTTGG 57.327 36.000 0.00 0.00 0.00 3.28
2283 3698 1.371467 TCTTTGGAGCCCATTGGAGA 58.629 50.000 3.62 0.00 31.53 3.71
2286 3701 1.600058 TTGGAGCCCATTGGAGATCT 58.400 50.000 3.62 0.00 31.53 2.75
2335 3752 3.884693 AGCATGTCATGTCTGAACAACAA 59.115 39.130 14.26 0.00 39.30 2.83
2383 3800 1.239296 GCATCAGCACCAGCACTCAA 61.239 55.000 0.00 0.00 45.49 3.02
2473 3890 1.305802 TCTTGGGAGGCGCCTCTTA 60.306 57.895 45.55 34.08 42.38 2.10
2486 3903 2.817258 CGCCTCTTACATTTGGGTTCAA 59.183 45.455 0.00 0.00 0.00 2.69
2530 3947 9.842444 CAATCAACATTTGTTACTTTTTAACCG 57.158 29.630 0.00 0.00 36.32 4.44
2583 4004 5.540719 ACCCCTAGCTGAGTCATAATTACTC 59.459 44.000 0.00 0.64 43.04 2.59
2590 4011 7.660112 AGCTGAGTCATAATTACTCTGATGAG 58.340 38.462 14.51 3.54 42.38 2.90
2625 4046 8.450578 AAGTCTGAACTGAACATAATTTGTCA 57.549 30.769 0.00 0.00 34.68 3.58
2628 4049 8.012241 GTCTGAACTGAACATAATTTGTCAGTC 58.988 37.037 5.69 1.75 41.59 3.51
2650 4071 6.829298 AGTCTAGTGCTCAATAGTAGCTAACA 59.171 38.462 0.00 0.00 40.73 2.41
2651 4072 6.913673 GTCTAGTGCTCAATAGTAGCTAACAC 59.086 42.308 0.00 0.00 40.73 3.32
2655 4076 5.812642 GTGCTCAATAGTAGCTAACACACAT 59.187 40.000 0.00 0.00 40.73 3.21
2657 4078 7.491372 GTGCTCAATAGTAGCTAACACACATTA 59.509 37.037 0.00 0.00 40.73 1.90
2660 4081 8.697846 TCAATAGTAGCTAACACACATTACAC 57.302 34.615 0.00 0.00 0.00 2.90
2662 4083 9.151471 CAATAGTAGCTAACACACATTACACTT 57.849 33.333 0.00 0.00 0.00 3.16
2664 4085 9.720769 ATAGTAGCTAACACACATTACACTTTT 57.279 29.630 0.00 0.00 0.00 2.27
2665 4086 7.861630 AGTAGCTAACACACATTACACTTTTG 58.138 34.615 0.00 0.00 0.00 2.44
2667 4088 7.328277 AGCTAACACACATTACACTTTTGAA 57.672 32.000 0.00 0.00 0.00 2.69
2668 4089 7.193595 AGCTAACACACATTACACTTTTGAAC 58.806 34.615 0.00 0.00 0.00 3.18
2673 4094 9.915629 AACACACATTACACTTTTGAACTAAAA 57.084 25.926 0.00 0.00 36.82 1.52
2674 4095 9.349145 ACACACATTACACTTTTGAACTAAAAC 57.651 29.630 0.00 0.00 34.66 2.43
2675 4096 8.803799 CACACATTACACTTTTGAACTAAAACC 58.196 33.333 0.00 0.00 34.66 3.27
2676 4097 8.524487 ACACATTACACTTTTGAACTAAAACCA 58.476 29.630 0.00 0.00 34.66 3.67
2677 4098 8.803799 CACATTACACTTTTGAACTAAAACCAC 58.196 33.333 0.00 0.00 34.66 4.16
2678 4099 7.698970 ACATTACACTTTTGAACTAAAACCACG 59.301 33.333 0.00 0.00 34.66 4.94
2679 4100 5.883503 ACACTTTTGAACTAAAACCACGA 57.116 34.783 0.00 0.00 34.66 4.35
2680 4101 5.633927 ACACTTTTGAACTAAAACCACGAC 58.366 37.500 0.00 0.00 34.66 4.34
2681 4102 5.181622 ACACTTTTGAACTAAAACCACGACA 59.818 36.000 0.00 0.00 34.66 4.35
2682 4103 5.510323 CACTTTTGAACTAAAACCACGACAC 59.490 40.000 0.00 0.00 34.66 3.67
2683 4104 5.413523 ACTTTTGAACTAAAACCACGACACT 59.586 36.000 0.00 0.00 34.66 3.55
2684 4105 5.883503 TTTGAACTAAAACCACGACACTT 57.116 34.783 0.00 0.00 0.00 3.16
2685 4106 6.981762 TTTGAACTAAAACCACGACACTTA 57.018 33.333 0.00 0.00 0.00 2.24
2686 4107 7.556733 TTTGAACTAAAACCACGACACTTAT 57.443 32.000 0.00 0.00 0.00 1.73
2687 4108 7.556733 TTGAACTAAAACCACGACACTTATT 57.443 32.000 0.00 0.00 0.00 1.40
2688 4109 7.556733 TGAACTAAAACCACGACACTTATTT 57.443 32.000 0.00 0.00 0.00 1.40
2689 4110 7.987649 TGAACTAAAACCACGACACTTATTTT 58.012 30.769 0.00 0.00 0.00 1.82
2690 4111 7.911205 TGAACTAAAACCACGACACTTATTTTG 59.089 33.333 0.00 0.00 0.00 2.44
2691 4112 6.731164 ACTAAAACCACGACACTTATTTTGG 58.269 36.000 0.00 0.00 0.00 3.28
2692 4113 5.838531 AAAACCACGACACTTATTTTGGA 57.161 34.783 0.00 0.00 0.00 3.53
2693 4114 6.399639 AAAACCACGACACTTATTTTGGAT 57.600 33.333 0.00 0.00 0.00 3.41
2694 4115 5.622770 AACCACGACACTTATTTTGGATC 57.377 39.130 0.00 0.00 0.00 3.36
2695 4116 3.682858 ACCACGACACTTATTTTGGATCG 59.317 43.478 0.00 0.00 0.00 3.69
2696 4117 3.063452 CCACGACACTTATTTTGGATCGG 59.937 47.826 0.00 0.00 32.56 4.18
2697 4118 3.063452 CACGACACTTATTTTGGATCGGG 59.937 47.826 0.00 0.00 32.56 5.14
2698 4119 2.612212 CGACACTTATTTTGGATCGGGG 59.388 50.000 0.00 0.00 0.00 5.73
2699 4120 2.949644 GACACTTATTTTGGATCGGGGG 59.050 50.000 0.00 0.00 0.00 5.40
2739 4160 5.288029 GCATTGCGAAATGAAATAACGAG 57.712 39.130 20.75 0.00 31.98 4.18
2813 4256 1.687123 CGTCCCCGAGTTAATGGAGAT 59.313 52.381 0.00 0.00 35.63 2.75
3088 4536 5.069251 CAGGTTTGTTTACATGTTTACCCCA 59.931 40.000 2.30 0.00 0.00 4.96
3089 4537 5.303333 AGGTTTGTTTACATGTTTACCCCAG 59.697 40.000 2.30 0.00 0.00 4.45
3098 4546 4.202212 ACATGTTTACCCCAGAAAAGTTGC 60.202 41.667 0.00 0.00 0.00 4.17
3101 4549 2.286365 TACCCCAGAAAAGTTGCAGG 57.714 50.000 0.00 0.00 0.00 4.85
3102 4550 0.555769 ACCCCAGAAAAGTTGCAGGA 59.444 50.000 0.00 0.00 0.00 3.86
3104 4552 1.615392 CCCCAGAAAAGTTGCAGGAAG 59.385 52.381 0.00 0.00 0.00 3.46
3105 4553 1.000171 CCCAGAAAAGTTGCAGGAAGC 60.000 52.381 0.00 0.00 45.96 3.86
3113 4570 4.574599 AAGTTGCAGGAAGCTTTAACAG 57.425 40.909 0.00 0.00 45.94 3.16
3114 4571 2.887152 AGTTGCAGGAAGCTTTAACAGG 59.113 45.455 0.00 0.00 45.94 4.00
3123 4580 7.120726 GCAGGAAGCTTTAACAGGAATTACTAA 59.879 37.037 0.00 0.00 41.15 2.24
3149 4606 8.272545 TCCATTTCTTGAAGATGACATGTTAG 57.727 34.615 0.00 0.00 0.00 2.34
3170 4627 8.904834 TGTTAGTTAACCTATTGTTGCTTTCAA 58.095 29.630 0.88 0.00 37.83 2.69
3171 4628 9.738832 GTTAGTTAACCTATTGTTGCTTTCAAA 57.261 29.630 0.88 0.00 37.83 2.69
3223 4681 4.890088 ACCTATTGTTACAGTTTCGAGCA 58.110 39.130 0.00 0.00 0.00 4.26
3224 4682 5.488341 ACCTATTGTTACAGTTTCGAGCAT 58.512 37.500 0.00 0.00 0.00 3.79
3299 4760 1.881973 TCATGAAGCAGGTCTGTTTGC 59.118 47.619 4.84 0.00 40.57 3.68
3322 4783 2.575735 TCAGCCCATGGACATTCTGTAA 59.424 45.455 15.22 0.00 0.00 2.41
3324 4785 3.317149 CAGCCCATGGACATTCTGTAATG 59.683 47.826 15.22 0.00 46.66 1.90
3330 4791 7.400439 CCCATGGACATTCTGTAATGATCTAT 58.600 38.462 15.22 1.12 44.50 1.98
3362 4823 7.478322 ACATTTATCACATTGCAGACTTGATC 58.522 34.615 5.69 0.00 0.00 2.92
3366 4827 8.913487 TTATCACATTGCAGACTTGATCATAT 57.087 30.769 0.00 0.00 0.00 1.78
3402 4863 2.680339 GCAACTATTCTGAAGCCTGTCC 59.320 50.000 0.00 0.00 0.00 4.02
3552 5013 5.590663 TGACAGAGACAGTATACTAGGCTTG 59.409 44.000 4.74 10.45 0.00 4.01
3740 5201 6.094881 TGTTCCTGTTGTTTCTAAAACTCTGG 59.905 38.462 4.40 9.57 0.00 3.86
3800 5265 7.649705 CACTTCGAGTCTATGCAGTAATATGTT 59.350 37.037 0.00 0.00 0.00 2.71
3875 5340 8.415553 TGTATAAGATGCCCAAAATTTCTGATG 58.584 33.333 0.00 0.00 0.00 3.07
3983 5460 3.653344 TCTTGGAACTGTCATGTTCTCG 58.347 45.455 12.12 0.00 44.02 4.04
3984 5461 3.069586 TCTTGGAACTGTCATGTTCTCGT 59.930 43.478 12.12 0.00 44.02 4.18
3985 5462 3.026630 TGGAACTGTCATGTTCTCGTC 57.973 47.619 12.12 1.45 44.02 4.20
3986 5463 2.364002 TGGAACTGTCATGTTCTCGTCA 59.636 45.455 12.12 3.27 44.02 4.35
3987 5464 3.181470 TGGAACTGTCATGTTCTCGTCAA 60.181 43.478 12.12 0.00 44.02 3.18
3988 5465 3.430218 GGAACTGTCATGTTCTCGTCAAG 59.570 47.826 12.12 0.00 44.02 3.02
3989 5466 3.735237 ACTGTCATGTTCTCGTCAAGT 57.265 42.857 0.00 0.00 0.00 3.16
3990 5467 3.643763 ACTGTCATGTTCTCGTCAAGTC 58.356 45.455 0.00 0.00 0.00 3.01
3991 5468 3.068165 ACTGTCATGTTCTCGTCAAGTCA 59.932 43.478 0.00 0.00 0.00 3.41
3992 5469 4.240888 CTGTCATGTTCTCGTCAAGTCAT 58.759 43.478 0.00 0.00 0.00 3.06
3993 5470 4.237724 TGTCATGTTCTCGTCAAGTCATC 58.762 43.478 0.00 0.00 0.00 2.92
4019 5496 4.336153 CACACACTATCATGGCATTAGCAA 59.664 41.667 0.00 0.00 44.61 3.91
4118 5595 6.088085 CCAAAATTTGCTTACTGACGTCATTC 59.912 38.462 20.40 7.15 0.00 2.67
4366 5848 4.517285 ACAATTCCTTGTATGCGACTGAT 58.483 39.130 0.00 0.00 43.77 2.90
4389 5871 3.042887 GTGAGCGTTTGTTTTGCTTAGG 58.957 45.455 0.00 0.00 39.49 2.69
4431 5913 7.037438 ACTACCAATGTTCATTTGCATCATTC 58.963 34.615 0.00 0.00 0.00 2.67
4456 5945 6.070881 CCAGACCATTAAACAATCCATTCCAA 60.071 38.462 0.00 0.00 0.00 3.53
4657 6146 3.214328 CAGGGTCTGCAACACTTTACTT 58.786 45.455 1.62 0.00 39.09 2.24
4673 6169 6.250951 CACTTTACTTGCGCTTACTACTACTC 59.749 42.308 9.73 0.00 0.00 2.59
4674 6170 6.150809 ACTTTACTTGCGCTTACTACTACTCT 59.849 38.462 9.73 0.00 0.00 3.24
4792 6364 7.078249 TGTGTAGGATTATGAGGCAATGTAT 57.922 36.000 0.00 0.00 0.00 2.29
4806 6378 8.892723 TGAGGCAATGTATAGTAAACTTCAATG 58.107 33.333 0.00 0.00 0.00 2.82
4807 6379 8.807948 AGGCAATGTATAGTAAACTTCAATGT 57.192 30.769 0.00 0.00 0.00 2.71
4808 6380 9.899661 AGGCAATGTATAGTAAACTTCAATGTA 57.100 29.630 0.00 0.00 0.00 2.29
4809 6381 9.931210 GGCAATGTATAGTAAACTTCAATGTAC 57.069 33.333 0.00 0.00 0.00 2.90
4890 6587 2.169561 TGTTCTACAGTGGCAAGTGTGA 59.830 45.455 12.11 4.66 40.30 3.58
4894 6591 2.346766 ACAGTGGCAAGTGTGATTCA 57.653 45.000 0.00 0.00 38.58 2.57
4961 6659 5.452078 TTGTTGGTCAATGATCTTTCCAC 57.548 39.130 0.00 0.00 0.00 4.02
4962 6660 4.468713 TGTTGGTCAATGATCTTTCCACA 58.531 39.130 0.00 0.00 0.00 4.17
4963 6661 5.078949 TGTTGGTCAATGATCTTTCCACAT 58.921 37.500 0.00 0.00 0.00 3.21
4964 6662 6.244654 TGTTGGTCAATGATCTTTCCACATA 58.755 36.000 0.00 0.00 0.00 2.29
4968 6666 8.450578 TGGTCAATGATCTTTCCACATATAAC 57.549 34.615 0.00 0.00 0.00 1.89
5004 8291 1.882912 TGTCTGTGATTGTGGAGTGC 58.117 50.000 0.00 0.00 0.00 4.40
5031 8318 2.987413 TTCTGTGTTTTATGCTGGCG 57.013 45.000 0.00 0.00 0.00 5.69
5098 8387 6.851330 GTCGTGACTTTAGTTCAAATTTGGAG 59.149 38.462 17.90 8.98 0.00 3.86
5134 10694 9.455847 TTTTTCAAAATGGAAAACAAACAACAG 57.544 25.926 0.94 0.00 44.08 3.16
5142 10702 5.121454 TGGAAAACAAACAACAGAATGCAAC 59.879 36.000 0.00 0.00 42.53 4.17
5150 10710 9.762933 ACAAACAACAGAATGCAACTAATAATT 57.237 25.926 0.00 0.00 42.53 1.40
5153 10713 8.761575 ACAACAGAATGCAACTAATAATTTGG 57.238 30.769 0.00 0.00 42.53 3.28
5154 10714 8.584157 ACAACAGAATGCAACTAATAATTTGGA 58.416 29.630 0.00 0.00 42.53 3.53
5156 10716 7.775120 ACAGAATGCAACTAATAATTTGGAGG 58.225 34.615 0.00 0.00 42.53 4.30
5157 10717 7.147846 ACAGAATGCAACTAATAATTTGGAGGG 60.148 37.037 0.00 0.00 42.53 4.30
5158 10718 7.068593 CAGAATGCAACTAATAATTTGGAGGGA 59.931 37.037 0.00 0.00 0.00 4.20
5159 10719 6.966534 ATGCAACTAATAATTTGGAGGGAG 57.033 37.500 0.00 0.00 0.00 4.30
5160 10720 5.826643 TGCAACTAATAATTTGGAGGGAGT 58.173 37.500 0.00 0.00 0.00 3.85
5161 10721 6.964464 TGCAACTAATAATTTGGAGGGAGTA 58.036 36.000 0.00 0.00 0.00 2.59
5162 10722 7.582719 TGCAACTAATAATTTGGAGGGAGTAT 58.417 34.615 0.00 0.00 0.00 2.12
5163 10723 8.719596 TGCAACTAATAATTTGGAGGGAGTATA 58.280 33.333 0.00 0.00 0.00 1.47
5199 10862 8.887036 ATGGAAAACAAACAATCTTAAGAACC 57.113 30.769 9.71 0.65 0.00 3.62
5200 10863 7.269316 TGGAAAACAAACAATCTTAAGAACCC 58.731 34.615 9.71 0.00 0.00 4.11
5208 10871 2.467566 TCTTAAGAACCCGCCTGAAC 57.532 50.000 1.68 0.00 0.00 3.18
5209 10872 1.002773 TCTTAAGAACCCGCCTGAACC 59.997 52.381 1.68 0.00 0.00 3.62
5249 10912 9.916397 ATAGCGAATTAGTTTAAAAATCTGACG 57.084 29.630 0.00 0.00 0.00 4.35
5272 10935 2.032290 GGTAACGTGTTCACTGGCTTTC 60.032 50.000 0.00 0.00 0.00 2.62
5277 10943 2.158449 CGTGTTCACTGGCTTTCATCTC 59.842 50.000 1.53 0.00 0.00 2.75
5282 10948 5.181748 GTTCACTGGCTTTCATCTCATAGT 58.818 41.667 0.00 0.00 0.00 2.12
5283 10949 4.763073 TCACTGGCTTTCATCTCATAGTG 58.237 43.478 0.00 0.00 36.53 2.74
5323 11017 2.680352 ACGTGGCTCCGATCCTGT 60.680 61.111 4.24 0.00 0.00 4.00
5326 11020 3.785859 TGGCTCCGATCCTGTGCC 61.786 66.667 13.40 13.40 41.57 5.01
5328 11022 2.268920 GCTCCGATCCTGTGCCAA 59.731 61.111 0.00 0.00 0.00 4.52
5329 11023 1.817099 GCTCCGATCCTGTGCCAAG 60.817 63.158 0.00 0.00 0.00 3.61
5330 11024 1.900351 CTCCGATCCTGTGCCAAGA 59.100 57.895 0.00 0.00 0.00 3.02
5331 11025 0.467384 CTCCGATCCTGTGCCAAGAT 59.533 55.000 0.00 0.00 0.00 2.40
5332 11026 0.911769 TCCGATCCTGTGCCAAGATT 59.088 50.000 0.00 0.00 0.00 2.40
5333 11027 1.134401 TCCGATCCTGTGCCAAGATTC 60.134 52.381 0.00 0.00 0.00 2.52
5351 11045 4.759693 AGATTCGTGCAAACTAATCCAACA 59.240 37.500 0.00 0.00 0.00 3.33
5376 11070 1.298859 GAGCACGTTCGCTGGGATTT 61.299 55.000 4.95 0.00 44.01 2.17
5401 11097 3.763319 CGAACGGTCGCCAGTTAG 58.237 61.111 11.19 0.00 41.08 2.34
5402 11098 2.442188 CGAACGGTCGCCAGTTAGC 61.442 63.158 11.19 0.00 41.08 3.09
5403 11099 1.373748 GAACGGTCGCCAGTTAGCA 60.374 57.895 0.00 0.00 0.00 3.49
5405 11101 0.321298 AACGGTCGCCAGTTAGCAAT 60.321 50.000 0.00 0.00 0.00 3.56
5406 11102 0.321298 ACGGTCGCCAGTTAGCAATT 60.321 50.000 0.00 0.00 0.00 2.32
5407 11103 0.373716 CGGTCGCCAGTTAGCAATTC 59.626 55.000 0.00 0.00 0.00 2.17
5412 11117 4.295051 GTCGCCAGTTAGCAATTCAAAAA 58.705 39.130 0.00 0.00 0.00 1.94
5437 11142 3.383761 AGACAAAATGAAAAGGCAAGCG 58.616 40.909 0.00 0.00 0.00 4.68
5445 11150 0.597377 AAAAGGCAAGCGCTTTTCGG 60.597 50.000 22.51 10.63 45.77 4.30
5480 11224 1.874019 CACCGACTCCGCATCGAAG 60.874 63.158 0.00 0.00 42.25 3.79
5530 11278 4.796231 GCACGACGGCGATCAGGT 62.796 66.667 22.49 0.00 41.64 4.00
5531 11279 2.880879 CACGACGGCGATCAGGTG 60.881 66.667 22.49 0.00 41.64 4.00
5533 11281 2.278206 CGACGGCGATCAGGTGAG 60.278 66.667 16.62 0.00 40.82 3.51
5534 11282 2.105128 GACGGCGATCAGGTGAGG 59.895 66.667 16.62 0.00 0.00 3.86
5535 11283 4.148825 ACGGCGATCAGGTGAGGC 62.149 66.667 16.62 0.00 0.00 4.70
5537 11285 4.148825 GGCGATCAGGTGAGGCGT 62.149 66.667 0.00 0.00 0.00 5.68
5538 11286 2.887568 GCGATCAGGTGAGGCGTG 60.888 66.667 0.00 0.00 0.00 5.34
5539 11287 2.887568 CGATCAGGTGAGGCGTGC 60.888 66.667 0.00 0.00 33.35 5.34
5540 11288 2.887568 GATCAGGTGAGGCGTGCG 60.888 66.667 0.00 0.00 33.35 5.34
5541 11289 3.356639 GATCAGGTGAGGCGTGCGA 62.357 63.158 0.00 0.00 33.35 5.10
5542 11290 3.649277 ATCAGGTGAGGCGTGCGAC 62.649 63.158 0.00 0.00 33.35 5.19
5552 11300 4.522169 CGTGCGACGCGACGAATG 62.522 66.667 33.07 24.76 39.94 2.67
5553 11301 4.191485 GTGCGACGCGACGAATGG 62.191 66.667 33.07 5.60 35.09 3.16
5557 11305 3.115892 GACGCGACGAATGGGCAA 61.116 61.111 15.93 0.00 0.00 4.52
5558 11306 3.083600 GACGCGACGAATGGGCAAG 62.084 63.158 15.93 0.00 0.00 4.01
5559 11307 2.813474 CGCGACGAATGGGCAAGA 60.813 61.111 0.00 0.00 0.00 3.02
5575 11323 2.223971 GCAAGAAACCGGGATCGATCTA 60.224 50.000 23.96 0.00 39.00 1.98
5584 11332 2.728225 CGGGATCGATCTACGCATACAC 60.728 54.545 23.96 4.10 42.26 2.90
5596 11344 0.527600 GCATACACTCATGGCGACGA 60.528 55.000 0.00 0.00 0.00 4.20
5598 11346 0.248498 ATACACTCATGGCGACGACG 60.248 55.000 2.12 2.12 42.93 5.12
5599 11347 1.300266 TACACTCATGGCGACGACGA 61.300 55.000 12.29 0.00 42.66 4.20
5639 11387 3.103911 CGTCTTCGACCACGGCAC 61.104 66.667 7.33 0.00 39.71 5.01
5640 11388 2.737376 GTCTTCGACCACGGCACC 60.737 66.667 0.00 0.00 40.21 5.01
5641 11389 3.228017 TCTTCGACCACGGCACCA 61.228 61.111 0.00 0.00 40.21 4.17
5642 11390 2.047274 CTTCGACCACGGCACCAT 60.047 61.111 0.00 0.00 40.21 3.55
5643 11391 1.671054 CTTCGACCACGGCACCATT 60.671 57.895 0.00 0.00 40.21 3.16
5644 11392 1.635663 CTTCGACCACGGCACCATTC 61.636 60.000 0.00 0.00 40.21 2.67
5645 11393 2.047274 CGACCACGGCACCATTCT 60.047 61.111 0.00 0.00 35.72 2.40
5646 11394 2.390599 CGACCACGGCACCATTCTG 61.391 63.158 0.00 0.00 35.72 3.02
5647 11395 2.672996 ACCACGGCACCATTCTGC 60.673 61.111 0.00 0.00 36.33 4.26
5648 11396 2.672651 CCACGGCACCATTCTGCA 60.673 61.111 0.00 0.00 39.08 4.41
5649 11397 2.693762 CCACGGCACCATTCTGCAG 61.694 63.158 7.63 7.63 39.08 4.41
5650 11398 3.058160 ACGGCACCATTCTGCAGC 61.058 61.111 9.47 0.00 39.08 5.25
5651 11399 4.170062 CGGCACCATTCTGCAGCG 62.170 66.667 9.47 0.00 39.08 5.18
5652 11400 3.818787 GGCACCATTCTGCAGCGG 61.819 66.667 9.47 11.85 39.08 5.52
5653 11401 2.747460 GCACCATTCTGCAGCGGA 60.747 61.111 19.70 0.00 37.11 5.54
5654 11402 3.044059 GCACCATTCTGCAGCGGAC 62.044 63.158 19.70 9.89 37.11 4.79
5655 11403 1.672030 CACCATTCTGCAGCGGACA 60.672 57.895 19.70 0.00 0.00 4.02
5656 11404 1.672356 ACCATTCTGCAGCGGACAC 60.672 57.895 19.70 0.00 0.00 3.67
5657 11405 2.401766 CCATTCTGCAGCGGACACC 61.402 63.158 9.47 0.00 0.00 4.16
5771 13176 2.509131 TGGTCATGTATCTGCATGGGAA 59.491 45.455 8.16 0.00 44.54 3.97
5781 13186 0.332293 TGCATGGGAAATGCTGAGGA 59.668 50.000 11.27 0.00 44.79 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.070481 TGCTACCATGACATAAACTGAACCTA 60.070 38.462 0.00 0.00 0.00 3.08
12 13 3.623060 CGCTTAAGTTGCTACCATGACAT 59.377 43.478 4.02 0.00 0.00 3.06
45 46 0.324943 AGACATGCTAAGTTGCCCGT 59.675 50.000 0.00 0.00 0.00 5.28
46 47 1.009829 GAGACATGCTAAGTTGCCCG 58.990 55.000 0.00 0.00 0.00 6.13
47 48 2.113860 TGAGACATGCTAAGTTGCCC 57.886 50.000 0.00 0.00 0.00 5.36
50 51 6.203530 TCTGAACTTTGAGACATGCTAAGTTG 59.796 38.462 16.18 8.34 39.92 3.16
51 52 6.291377 TCTGAACTTTGAGACATGCTAAGTT 58.709 36.000 13.32 13.32 41.56 2.66
53 54 6.648310 TCTTCTGAACTTTGAGACATGCTAAG 59.352 38.462 0.00 0.00 0.00 2.18
54 55 6.524734 TCTTCTGAACTTTGAGACATGCTAA 58.475 36.000 0.00 0.00 0.00 3.09
129 134 4.859798 CGACAAGCCAAAGTAACACAAAAA 59.140 37.500 0.00 0.00 0.00 1.94
286 291 1.266175 GCCCGAAGATCTGCATCATTG 59.734 52.381 0.51 0.00 0.00 2.82
287 292 1.602311 GCCCGAAGATCTGCATCATT 58.398 50.000 0.51 0.00 0.00 2.57
312 317 2.584791 CAAGTTTATCGTGTTGGCAGC 58.415 47.619 0.00 0.00 0.00 5.25
326 331 9.423061 GGTGAATTTCTATTATGTTGCAAGTTT 57.577 29.630 0.00 0.00 0.00 2.66
354 359 1.402325 GGTTGGCGCTAAATTGTGGTC 60.402 52.381 8.12 0.00 0.00 4.02
418 423 9.299963 CATATTTGGCGAAACAAATCTAAATCA 57.700 29.630 13.86 0.25 45.24 2.57
431 436 4.713553 TGCTATCCTCATATTTGGCGAAA 58.286 39.130 0.00 0.00 0.00 3.46
433 438 4.020307 TGATGCTATCCTCATATTTGGCGA 60.020 41.667 0.00 0.00 0.00 5.54
434 439 4.256110 TGATGCTATCCTCATATTTGGCG 58.744 43.478 0.00 0.00 0.00 5.69
435 440 9.217278 CTATATGATGCTATCCTCATATTTGGC 57.783 37.037 8.90 0.00 40.49 4.52
436 441 9.722184 CCTATATGATGCTATCCTCATATTTGG 57.278 37.037 8.90 8.40 40.49 3.28
440 445 8.878211 CCAACCTATATGATGCTATCCTCATAT 58.122 37.037 8.70 8.70 43.80 1.78
441 446 8.067488 TCCAACCTATATGATGCTATCCTCATA 58.933 37.037 0.00 0.00 38.39 2.15
442 447 6.905215 TCCAACCTATATGATGCTATCCTCAT 59.095 38.462 0.00 0.00 36.19 2.90
443 448 6.263754 TCCAACCTATATGATGCTATCCTCA 58.736 40.000 0.00 0.00 0.00 3.86
451 460 6.262944 TGTGTGATTTCCAACCTATATGATGC 59.737 38.462 0.00 0.00 0.00 3.91
455 464 8.455903 AATCTGTGTGATTTCCAACCTATATG 57.544 34.615 0.00 0.00 42.28 1.78
478 487 9.895138 AAATAAGGATGCATTGAAAAGCTAAAT 57.105 25.926 0.00 0.00 0.00 1.40
479 488 9.153721 CAAATAAGGATGCATTGAAAAGCTAAA 57.846 29.630 0.00 0.00 0.00 1.85
480 489 8.313292 ACAAATAAGGATGCATTGAAAAGCTAA 58.687 29.630 0.00 0.00 0.00 3.09
481 490 7.839907 ACAAATAAGGATGCATTGAAAAGCTA 58.160 30.769 0.00 0.00 0.00 3.32
502 511 5.683743 GCATACACGCTTCAAGTAAAACAAA 59.316 36.000 0.00 0.00 0.00 2.83
547 557 2.168496 TGACTACCAGAAGGACCGAAG 58.832 52.381 0.00 0.00 38.69 3.79
552 562 2.758979 TCGGATTGACTACCAGAAGGAC 59.241 50.000 0.00 0.00 38.69 3.85
553 563 3.095912 TCGGATTGACTACCAGAAGGA 57.904 47.619 0.00 0.00 38.69 3.36
559 569 2.380941 TCGGATTCGGATTGACTACCA 58.619 47.619 0.00 0.00 36.95 3.25
560 570 3.447918 TTCGGATTCGGATTGACTACC 57.552 47.619 0.00 0.00 36.95 3.18
561 571 3.802685 CCTTTCGGATTCGGATTGACTAC 59.197 47.826 0.00 0.00 36.95 2.73
562 572 3.181469 CCCTTTCGGATTCGGATTGACTA 60.181 47.826 0.00 0.00 36.95 2.59
563 573 2.420129 CCCTTTCGGATTCGGATTGACT 60.420 50.000 0.00 0.00 36.95 3.41
564 574 1.940613 CCCTTTCGGATTCGGATTGAC 59.059 52.381 0.00 0.00 36.95 3.18
565 575 1.834896 TCCCTTTCGGATTCGGATTGA 59.165 47.619 0.00 0.00 34.86 2.57
566 576 2.325583 TCCCTTTCGGATTCGGATTG 57.674 50.000 0.00 0.00 34.86 2.67
568 578 4.532521 AGATATTCCCTTTCGGATTCGGAT 59.467 41.667 0.00 0.00 41.63 4.18
569 579 3.901844 AGATATTCCCTTTCGGATTCGGA 59.098 43.478 0.00 0.00 41.63 4.55
570 580 4.273148 AGATATTCCCTTTCGGATTCGG 57.727 45.455 0.00 0.00 41.63 4.30
571 581 5.050091 CACAAGATATTCCCTTTCGGATTCG 60.050 44.000 0.00 0.00 41.63 3.34
572 582 5.823045 ACACAAGATATTCCCTTTCGGATTC 59.177 40.000 0.00 0.00 41.63 2.52
574 584 5.373812 ACACAAGATATTCCCTTTCGGAT 57.626 39.130 0.00 0.00 41.63 4.18
575 585 4.837093 ACACAAGATATTCCCTTTCGGA 57.163 40.909 0.00 0.00 39.68 4.55
576 586 4.335594 GGAACACAAGATATTCCCTTTCGG 59.664 45.833 0.00 0.00 36.64 4.30
577 587 4.941263 TGGAACACAAGATATTCCCTTTCG 59.059 41.667 0.00 0.00 41.12 3.46
605 615 4.142816 GGTCATCATCAAACAAGGAGAACG 60.143 45.833 0.00 0.00 0.00 3.95
615 625 3.817647 GGCATAGGAGGTCATCATCAAAC 59.182 47.826 0.00 0.00 0.00 2.93
616 626 3.718434 AGGCATAGGAGGTCATCATCAAA 59.282 43.478 0.00 0.00 0.00 2.69
626 636 1.972588 AGGTTTGAGGCATAGGAGGT 58.027 50.000 0.00 0.00 0.00 3.85
633 643 4.584638 TGTATGGTTAGGTTTGAGGCAT 57.415 40.909 0.00 0.00 0.00 4.40
649 659 6.761714 GGTCTAGACCCTTGTATGTTTGTATG 59.238 42.308 28.87 0.00 45.68 2.39
689 699 4.855531 ACCGAGTTTGACAACTTAAATGC 58.144 39.130 0.00 0.00 43.79 3.56
711 724 7.326454 CACTAGAACATTGAATCCTCTCTTGA 58.674 38.462 0.00 0.00 0.00 3.02
719 732 4.096984 CCAAGCCACTAGAACATTGAATCC 59.903 45.833 0.00 0.00 0.00 3.01
721 734 3.445096 GCCAAGCCACTAGAACATTGAAT 59.555 43.478 0.00 0.00 0.00 2.57
725 738 1.453155 CGCCAAGCCACTAGAACATT 58.547 50.000 0.00 0.00 0.00 2.71
726 739 1.026718 GCGCCAAGCCACTAGAACAT 61.027 55.000 0.00 0.00 40.81 2.71
738 754 1.225376 TTACAAGGACACGCGCCAAG 61.225 55.000 5.73 0.00 0.00 3.61
739 755 0.604243 ATTACAAGGACACGCGCCAA 60.604 50.000 5.73 0.00 0.00 4.52
754 770 5.730550 TGATCTACACACCTGGTCAATTAC 58.269 41.667 0.00 0.00 0.00 1.89
760 776 4.740934 GCCTAATGATCTACACACCTGGTC 60.741 50.000 0.00 0.00 0.00 4.02
761 777 3.134804 GCCTAATGATCTACACACCTGGT 59.865 47.826 0.00 0.00 0.00 4.00
764 780 6.784969 AGATAAGCCTAATGATCTACACACCT 59.215 38.462 0.00 0.00 0.00 4.00
765 781 6.998802 AGATAAGCCTAATGATCTACACACC 58.001 40.000 0.00 0.00 0.00 4.16
766 782 8.364142 AGAAGATAAGCCTAATGATCTACACAC 58.636 37.037 0.00 0.00 0.00 3.82
767 783 8.484214 AGAAGATAAGCCTAATGATCTACACA 57.516 34.615 0.00 0.00 0.00 3.72
769 785 9.815306 ACTAGAAGATAAGCCTAATGATCTACA 57.185 33.333 0.00 0.00 0.00 2.74
771 787 9.469097 GGACTAGAAGATAAGCCTAATGATCTA 57.531 37.037 0.00 0.00 0.00 1.98
772 788 7.952930 TGGACTAGAAGATAAGCCTAATGATCT 59.047 37.037 0.00 0.00 0.00 2.75
773 789 8.128322 TGGACTAGAAGATAAGCCTAATGATC 57.872 38.462 0.00 0.00 0.00 2.92
775 791 7.730332 TCATGGACTAGAAGATAAGCCTAATGA 59.270 37.037 0.00 0.00 0.00 2.57
776 792 7.901029 TCATGGACTAGAAGATAAGCCTAATG 58.099 38.462 0.00 0.00 0.00 1.90
778 794 8.370940 CAATCATGGACTAGAAGATAAGCCTAA 58.629 37.037 0.00 0.00 0.00 2.69
779 795 7.730332 TCAATCATGGACTAGAAGATAAGCCTA 59.270 37.037 0.00 0.00 0.00 3.93
781 797 6.763355 TCAATCATGGACTAGAAGATAAGCC 58.237 40.000 0.00 0.00 0.00 4.35
787 803 8.637099 CACTATCTTCAATCATGGACTAGAAGA 58.363 37.037 14.57 14.57 43.63 2.87
788 804 8.420222 ACACTATCTTCAATCATGGACTAGAAG 58.580 37.037 0.00 0.00 35.13 2.85
791 807 6.860539 CGACACTATCTTCAATCATGGACTAG 59.139 42.308 0.00 0.00 0.00 2.57
793 809 5.360999 TCGACACTATCTTCAATCATGGACT 59.639 40.000 0.00 0.00 0.00 3.85
794 810 5.592054 TCGACACTATCTTCAATCATGGAC 58.408 41.667 0.00 0.00 0.00 4.02
796 812 6.908870 TTTCGACACTATCTTCAATCATGG 57.091 37.500 0.00 0.00 0.00 3.66
820 2182 9.621629 TCCATCCGTTTCATAATATAAAAGTGT 57.378 29.630 0.00 0.00 0.00 3.55
822 2184 9.847224 ACTCCATCCGTTTCATAATATAAAAGT 57.153 29.630 0.00 0.00 0.00 2.66
828 2190 9.658799 CAATCTACTCCATCCGTTTCATAATAT 57.341 33.333 0.00 0.00 0.00 1.28
829 2191 8.866093 TCAATCTACTCCATCCGTTTCATAATA 58.134 33.333 0.00 0.00 0.00 0.98
830 2192 7.735917 TCAATCTACTCCATCCGTTTCATAAT 58.264 34.615 0.00 0.00 0.00 1.28
831 2193 7.119709 TCAATCTACTCCATCCGTTTCATAA 57.880 36.000 0.00 0.00 0.00 1.90
832 2194 6.724893 TCAATCTACTCCATCCGTTTCATA 57.275 37.500 0.00 0.00 0.00 2.15
833 2195 5.614324 TCAATCTACTCCATCCGTTTCAT 57.386 39.130 0.00 0.00 0.00 2.57
834 2196 5.414789 TTCAATCTACTCCATCCGTTTCA 57.585 39.130 0.00 0.00 0.00 2.69
835 2197 5.875359 ACTTTCAATCTACTCCATCCGTTTC 59.125 40.000 0.00 0.00 0.00 2.78
836 2198 5.805728 ACTTTCAATCTACTCCATCCGTTT 58.194 37.500 0.00 0.00 0.00 3.60
837 2199 5.422214 ACTTTCAATCTACTCCATCCGTT 57.578 39.130 0.00 0.00 0.00 4.44
838 2200 5.422214 AACTTTCAATCTACTCCATCCGT 57.578 39.130 0.00 0.00 0.00 4.69
839 2201 6.595716 AGAAAACTTTCAATCTACTCCATCCG 59.404 38.462 5.07 0.00 39.61 4.18
840 2202 7.929941 AGAAAACTTTCAATCTACTCCATCC 57.070 36.000 5.07 0.00 39.61 3.51
842 2204 9.793259 TGTAAGAAAACTTTCAATCTACTCCAT 57.207 29.630 5.07 0.00 39.61 3.41
843 2205 9.621629 TTGTAAGAAAACTTTCAATCTACTCCA 57.378 29.630 5.07 0.00 39.61 3.86
874 2236 4.388485 GTGCCAAAATCATTCCAACCTTT 58.612 39.130 0.00 0.00 0.00 3.11
877 2239 2.029470 TCGTGCCAAAATCATTCCAACC 60.029 45.455 0.00 0.00 0.00 3.77
941 2304 3.561503 GAATTTGTGAGTTTACACCCGC 58.438 45.455 0.00 0.00 39.69 6.13
942 2305 3.057806 GGGAATTTGTGAGTTTACACCCG 60.058 47.826 0.00 0.00 39.69 5.28
1019 2382 4.377760 TCGGAAGGGGGAGCGAGT 62.378 66.667 0.00 0.00 0.00 4.18
1120 2490 1.153349 GCTTACCGGCTTCTCTGGG 60.153 63.158 0.00 0.00 45.92 4.45
1304 2683 7.227512 GGATACCATAGGAAACAATCAAGTCAG 59.772 40.741 0.00 0.00 0.00 3.51
1320 2699 7.093552 CCACTAATCAGGAAGAGGATACCATAG 60.094 44.444 0.00 0.00 37.17 2.23
1333 2712 5.836024 AAGTAACACCCACTAATCAGGAA 57.164 39.130 0.00 0.00 0.00 3.36
1353 2732 5.917447 TCGAATCGAGCTCAAAGATCATAAG 59.083 40.000 15.40 0.00 27.99 1.73
1381 2763 1.592939 GCGATCTTTCCTCGAGGGC 60.593 63.158 30.80 19.91 38.38 5.19
1465 2847 2.777692 GGATCTTGGATGGGTCAACCTA 59.222 50.000 0.00 0.00 41.11 3.08
1491 2873 0.756903 ACTAAGTTGACCGGTGCTGT 59.243 50.000 14.63 0.00 0.00 4.40
1493 2875 2.616842 CAAAACTAAGTTGACCGGTGCT 59.383 45.455 14.63 4.11 0.00 4.40
1563 2949 5.883180 ACATACCTCCTATCAGACTAGGAC 58.117 45.833 0.00 0.00 41.89 3.85
1582 2968 6.743110 CAGAAGATAAGCTGCAGACTACATA 58.257 40.000 20.43 4.37 0.00 2.29
1628 3014 3.515502 AGAGAAATCGAACTGATGGACCA 59.484 43.478 0.00 0.00 37.39 4.02
1745 3157 3.036091 CGGTACCTCTTTTCTCCCCATA 58.964 50.000 10.90 0.00 0.00 2.74
1765 3177 0.247460 TCAGACACTTGCAGATCCCG 59.753 55.000 0.00 0.00 0.00 5.14
1818 3230 2.551032 CAGAAAAGTGTGCATCTGCTCA 59.449 45.455 3.53 3.25 41.53 4.26
1836 3248 1.541015 CCAGCAACACAGCAGTACAGA 60.541 52.381 0.00 0.00 36.85 3.41
1909 3321 0.679002 CCTCTGTGCACCAATCCCAG 60.679 60.000 15.69 2.88 0.00 4.45
1920 3332 1.078143 ATTCTTCCGGCCTCTGTGC 60.078 57.895 0.00 0.00 0.00 4.57
1921 3333 0.462759 GGATTCTTCCGGCCTCTGTG 60.463 60.000 0.00 0.00 30.72 3.66
1922 3334 1.627297 GGGATTCTTCCGGCCTCTGT 61.627 60.000 0.00 0.00 43.63 3.41
1926 3338 1.281925 ACATGGGATTCTTCCGGCCT 61.282 55.000 0.00 0.00 43.63 5.19
1928 3340 0.394352 ACACATGGGATTCTTCCGGC 60.394 55.000 0.00 0.00 43.63 6.13
1936 3348 6.465894 GGCTCTTAATACCTACACATGGGATT 60.466 42.308 0.00 0.00 40.86 3.01
1957 3369 0.109039 GTCAGTCCTTGTCTCGGCTC 60.109 60.000 0.00 0.00 0.00 4.70
1958 3370 0.540830 AGTCAGTCCTTGTCTCGGCT 60.541 55.000 0.00 0.00 0.00 5.52
1959 3371 1.174783 TAGTCAGTCCTTGTCTCGGC 58.825 55.000 0.00 0.00 0.00 5.54
1961 3373 4.082190 TCCATTTAGTCAGTCCTTGTCTCG 60.082 45.833 0.00 0.00 0.00 4.04
2011 3425 4.894114 GCAGATCTTAACTACCCAGTAGGA 59.106 45.833 6.71 0.00 40.13 2.94
2022 3436 7.665690 ACGAGATTCATATGCAGATCTTAACT 58.334 34.615 13.67 0.00 0.00 2.24
2046 3460 6.853362 CCTAAGTTCTTAATAGCGTACCGTAC 59.147 42.308 0.00 0.00 0.00 3.67
2049 3463 6.064846 TCCTAAGTTCTTAATAGCGTACCG 57.935 41.667 0.00 0.00 0.00 4.02
2065 3479 4.514066 GTCGGAACACACAAATTCCTAAGT 59.486 41.667 1.82 0.00 42.00 2.24
2067 3481 4.452825 TGTCGGAACACACAAATTCCTAA 58.547 39.130 1.82 0.00 42.00 2.69
2086 3500 1.067071 CCTTACGGGGAGAGTGTTGTC 60.067 57.143 0.00 0.00 0.00 3.18
2090 3504 1.346722 CAAACCTTACGGGGAGAGTGT 59.653 52.381 0.00 0.00 40.03 3.55
2150 3565 5.885912 ACCGGATGACTTTTAATAGCATTGT 59.114 36.000 9.46 0.00 0.00 2.71
2234 3649 0.595095 CTGCAAGAAACAGGGAGCAC 59.405 55.000 0.00 0.00 34.07 4.40
2263 3678 1.925255 TCTCCAATGGGCTCCAAAGAT 59.075 47.619 0.00 0.00 36.95 2.40
2270 3685 4.531732 AGATCTTAGATCTCCAATGGGCTC 59.468 45.833 18.14 0.00 0.00 4.70
2283 3698 9.152327 TCCAGATGAACATACAAGATCTTAGAT 57.848 33.333 7.86 1.50 0.00 1.98
2286 3701 8.539117 TCTCCAGATGAACATACAAGATCTTA 57.461 34.615 7.86 0.00 0.00 2.10
2335 3752 5.819901 GCTGGAGCTTTTACTAACATGATCT 59.180 40.000 0.00 0.00 38.21 2.75
2383 3800 0.543174 ACACCTCCTCCTCGCTTTCT 60.543 55.000 0.00 0.00 0.00 2.52
2440 3857 3.907474 TCCCAAGACTATGTCCTTTGTCA 59.093 43.478 0.00 0.00 32.18 3.58
2486 3903 4.408921 TGATTGACTCTTGATTACCGGGAT 59.591 41.667 6.32 0.00 0.00 3.85
2537 3954 1.478631 AGCCCAAGGAAGCAAATAGC 58.521 50.000 0.00 0.00 46.19 2.97
2562 3979 7.517614 TCAGAGTAATTATGACTCAGCTAGG 57.482 40.000 11.92 0.00 44.86 3.02
2583 4004 3.444742 AGACTTCAGAGACAGCTCATCAG 59.555 47.826 0.00 0.00 43.81 2.90
2590 4011 3.005261 TCAGTTCAGACTTCAGAGACAGC 59.995 47.826 0.00 0.00 32.54 4.40
2625 4046 6.829298 TGTTAGCTACTATTGAGCACTAGACT 59.171 38.462 0.00 0.00 42.69 3.24
2628 4049 6.693545 GTGTGTTAGCTACTATTGAGCACTAG 59.306 42.308 0.00 0.00 42.69 2.57
2650 4071 8.524487 TGGTTTTAGTTCAAAAGTGTAATGTGT 58.476 29.630 0.00 0.00 36.79 3.72
2651 4072 8.803799 GTGGTTTTAGTTCAAAAGTGTAATGTG 58.196 33.333 0.00 0.00 36.79 3.21
2655 4076 7.094890 TGTCGTGGTTTTAGTTCAAAAGTGTAA 60.095 33.333 0.00 0.00 36.79 2.41
2657 4078 5.181622 TGTCGTGGTTTTAGTTCAAAAGTGT 59.818 36.000 0.00 0.00 36.79 3.55
2660 4081 5.875930 AGTGTCGTGGTTTTAGTTCAAAAG 58.124 37.500 0.00 0.00 36.79 2.27
2662 4083 5.883503 AAGTGTCGTGGTTTTAGTTCAAA 57.116 34.783 0.00 0.00 0.00 2.69
2664 4085 7.556733 AAATAAGTGTCGTGGTTTTAGTTCA 57.443 32.000 0.00 0.00 0.00 3.18
2665 4086 7.377662 CCAAAATAAGTGTCGTGGTTTTAGTTC 59.622 37.037 0.00 0.00 0.00 3.01
2667 4088 6.543100 TCCAAAATAAGTGTCGTGGTTTTAGT 59.457 34.615 0.00 0.00 0.00 2.24
2668 4089 6.961576 TCCAAAATAAGTGTCGTGGTTTTAG 58.038 36.000 0.00 0.00 0.00 1.85
2671 4092 5.334569 CGATCCAAAATAAGTGTCGTGGTTT 60.335 40.000 0.00 0.00 0.00 3.27
2672 4093 4.153475 CGATCCAAAATAAGTGTCGTGGTT 59.847 41.667 0.00 0.00 0.00 3.67
2673 4094 3.682858 CGATCCAAAATAAGTGTCGTGGT 59.317 43.478 0.00 0.00 0.00 4.16
2674 4095 3.063452 CCGATCCAAAATAAGTGTCGTGG 59.937 47.826 0.00 0.00 0.00 4.94
2675 4096 3.063452 CCCGATCCAAAATAAGTGTCGTG 59.937 47.826 0.00 0.00 0.00 4.35
2676 4097 3.267483 CCCGATCCAAAATAAGTGTCGT 58.733 45.455 0.00 0.00 0.00 4.34
2677 4098 2.612212 CCCCGATCCAAAATAAGTGTCG 59.388 50.000 0.00 0.00 0.00 4.35
2678 4099 2.949644 CCCCCGATCCAAAATAAGTGTC 59.050 50.000 0.00 0.00 0.00 3.67
2679 4100 3.012934 CCCCCGATCCAAAATAAGTGT 57.987 47.619 0.00 0.00 0.00 3.55
2696 4117 2.618709 CGCAATTCAGAATTACTCCCCC 59.381 50.000 8.12 0.00 0.00 5.40
2697 4118 2.033424 GCGCAATTCAGAATTACTCCCC 59.967 50.000 8.12 0.00 0.00 4.81
2698 4119 2.682856 TGCGCAATTCAGAATTACTCCC 59.317 45.455 8.16 0.00 0.00 4.30
2699 4120 4.558538 ATGCGCAATTCAGAATTACTCC 57.441 40.909 17.11 0.00 0.00 3.85
2700 4121 4.205792 GCAATGCGCAATTCAGAATTACTC 59.794 41.667 17.11 0.00 41.79 2.59
2701 4122 4.107622 GCAATGCGCAATTCAGAATTACT 58.892 39.130 17.11 0.00 41.79 2.24
2702 4123 4.427438 GCAATGCGCAATTCAGAATTAC 57.573 40.909 17.11 2.08 41.79 1.89
2813 4256 8.995027 AGGTTGCATTATCAACATTAGGAATA 57.005 30.769 8.60 0.00 45.98 1.75
2879 4323 1.635487 CATTCAAGTGGAGGGAAGGGA 59.365 52.381 0.00 0.00 0.00 4.20
3008 4456 1.755200 ACCATAAGTCCCCAACCTGT 58.245 50.000 0.00 0.00 0.00 4.00
3088 4536 5.127031 TGTTAAAGCTTCCTGCAACTTTTCT 59.873 36.000 0.00 0.00 45.94 2.52
3089 4537 5.348164 TGTTAAAGCTTCCTGCAACTTTTC 58.652 37.500 0.00 0.00 45.94 2.29
3098 4546 8.561738 TTAGTAATTCCTGTTAAAGCTTCCTG 57.438 34.615 0.00 0.00 0.00 3.86
3101 4549 9.174166 TGGATTAGTAATTCCTGTTAAAGCTTC 57.826 33.333 0.00 0.00 0.00 3.86
3102 4550 9.700831 ATGGATTAGTAATTCCTGTTAAAGCTT 57.299 29.630 0.00 0.00 0.00 3.74
3123 4580 7.713734 AACATGTCATCTTCAAGAAATGGAT 57.286 32.000 0.00 0.00 0.00 3.41
3140 4597 8.040716 AGCAACAATAGGTTAACTAACATGTC 57.959 34.615 5.42 0.00 37.72 3.06
3187 4645 1.286248 ATAGGTCACTGGTGGGGTTC 58.714 55.000 0.70 0.00 0.00 3.62
3193 4651 4.894784 ACTGTAACAATAGGTCACTGGTG 58.105 43.478 0.00 0.00 0.00 4.17
3198 4656 5.163982 GCTCGAAACTGTAACAATAGGTCAC 60.164 44.000 0.00 0.00 0.00 3.67
3223 4681 2.094545 GCGAAAAATCTGGTCTGCCAAT 60.095 45.455 0.00 0.00 45.51 3.16
3224 4682 1.269448 GCGAAAAATCTGGTCTGCCAA 59.731 47.619 0.00 0.00 45.51 4.52
3299 4760 0.549950 AGAATGTCCATGGGCTGAGG 59.450 55.000 19.09 0.00 0.00 3.86
3336 4797 7.920160 TCAAGTCTGCAATGTGATAAATGTA 57.080 32.000 0.00 0.00 0.00 2.29
3337 4798 6.822667 TCAAGTCTGCAATGTGATAAATGT 57.177 33.333 0.00 0.00 0.00 2.71
3389 4850 1.130054 AAGCAGGGACAGGCTTCAGA 61.130 55.000 0.00 0.00 45.51 3.27
3402 4863 6.924111 TGAATTCCTTTAGCTAAAAAGCAGG 58.076 36.000 19.10 15.85 35.53 4.85
3566 5027 5.644977 TCTGCAGGACATATATACGAAGG 57.355 43.478 15.13 0.00 0.00 3.46
3740 5201 1.889545 CCTCAGGGCTTTGCTATAGC 58.110 55.000 18.18 18.18 42.50 2.97
3800 5265 7.661027 TGAATAGTGAACAATGACATCAGACAA 59.339 33.333 0.00 0.00 0.00 3.18
3983 5460 5.696270 TGATAGTGTGTGTTGATGACTTGAC 59.304 40.000 0.00 0.00 0.00 3.18
3984 5461 5.852827 TGATAGTGTGTGTTGATGACTTGA 58.147 37.500 0.00 0.00 0.00 3.02
3985 5462 6.402875 CCATGATAGTGTGTGTTGATGACTTG 60.403 42.308 0.00 0.00 0.00 3.16
3986 5463 5.645067 CCATGATAGTGTGTGTTGATGACTT 59.355 40.000 0.00 0.00 0.00 3.01
3987 5464 5.181009 CCATGATAGTGTGTGTTGATGACT 58.819 41.667 0.00 0.00 0.00 3.41
3988 5465 4.201851 GCCATGATAGTGTGTGTTGATGAC 60.202 45.833 0.00 0.00 0.00 3.06
3989 5466 3.940852 GCCATGATAGTGTGTGTTGATGA 59.059 43.478 0.00 0.00 0.00 2.92
3990 5467 3.690628 TGCCATGATAGTGTGTGTTGATG 59.309 43.478 0.00 0.00 0.00 3.07
3991 5468 3.954200 TGCCATGATAGTGTGTGTTGAT 58.046 40.909 0.00 0.00 0.00 2.57
3992 5469 3.415457 TGCCATGATAGTGTGTGTTGA 57.585 42.857 0.00 0.00 0.00 3.18
3993 5470 4.707030 AATGCCATGATAGTGTGTGTTG 57.293 40.909 0.00 0.00 0.00 3.33
4118 5595 4.825422 TCTCAATTAAGCAGGTGTCTCTG 58.175 43.478 0.00 0.00 37.79 3.35
4366 5848 0.814457 AGCAAAACAAACGCTCACCA 59.186 45.000 0.00 0.00 0.00 4.17
4389 5871 1.251251 AGTTCACCAAATCAGCAGGC 58.749 50.000 0.00 0.00 0.00 4.85
4431 5913 5.421693 TGGAATGGATTGTTTAATGGTCTGG 59.578 40.000 0.00 0.00 0.00 3.86
4456 5945 7.445096 TGATCAATGACCGAATAATGCAGTAAT 59.555 33.333 0.00 0.00 0.00 1.89
4581 6070 0.469144 GAAGCTCCTCTCCCTCGGAT 60.469 60.000 0.00 0.00 0.00 4.18
4648 6137 6.091437 AGTAGTAGTAAGCGCAAGTAAAGTG 58.909 40.000 11.47 0.00 41.68 3.16
4657 6146 1.404391 GCCAGAGTAGTAGTAAGCGCA 59.596 52.381 11.47 0.00 0.00 6.09
4673 6169 5.105228 ACTTGGATTTTACAATGATGGCCAG 60.105 40.000 13.05 0.00 0.00 4.85
4674 6170 4.776837 ACTTGGATTTTACAATGATGGCCA 59.223 37.500 8.56 8.56 0.00 5.36
4806 6378 7.901889 GCTTTTTCCTTGCTAAATACTACGTAC 59.098 37.037 0.00 0.00 0.00 3.67
4807 6379 7.603404 TGCTTTTTCCTTGCTAAATACTACGTA 59.397 33.333 0.00 0.00 0.00 3.57
4808 6380 6.428771 TGCTTTTTCCTTGCTAAATACTACGT 59.571 34.615 0.00 0.00 0.00 3.57
4809 6381 6.741358 GTGCTTTTTCCTTGCTAAATACTACG 59.259 38.462 0.00 0.00 0.00 3.51
4846 6543 2.562125 ACTCGTGGAGCTGAGAGTC 58.438 57.895 5.84 0.00 39.49 3.36
4963 6661 9.890629 AGACATGCTTCAAGTCTATTTGTTATA 57.109 29.630 3.25 0.00 40.02 0.98
4964 6662 8.671921 CAGACATGCTTCAAGTCTATTTGTTAT 58.328 33.333 4.66 0.00 39.85 1.89
4968 6666 6.148315 TCACAGACATGCTTCAAGTCTATTTG 59.852 38.462 4.66 3.89 39.85 2.32
4971 6669 5.411831 TCACAGACATGCTTCAAGTCTAT 57.588 39.130 4.66 0.00 39.85 1.98
4976 8263 4.473199 CACAATCACAGACATGCTTCAAG 58.527 43.478 0.00 0.00 0.00 3.02
5004 8291 6.366877 CCAGCATAAAACACAGAAAGATTTGG 59.633 38.462 0.00 0.00 0.00 3.28
5053 8342 4.678622 GACACTTATTTATTTTGGGGCGG 58.321 43.478 0.00 0.00 0.00 6.13
5054 8343 4.142556 ACGACACTTATTTATTTTGGGGCG 60.143 41.667 0.00 0.00 0.00 6.13
5056 8345 6.150474 AGTCACGACACTTATTTATTTTGGGG 59.850 38.462 0.00 0.00 0.00 4.96
5118 10678 4.825422 TGCATTCTGTTGTTTGTTTTCCA 58.175 34.783 0.00 0.00 0.00 3.53
5134 10694 7.068716 ACTCCCTCCAAATTATTAGTTGCATTC 59.931 37.037 0.00 0.00 0.00 2.67
5174 10734 7.931407 GGGTTCTTAAGATTGTTTGTTTTCCAT 59.069 33.333 5.89 0.00 0.00 3.41
5175 10735 7.269316 GGGTTCTTAAGATTGTTTGTTTTCCA 58.731 34.615 5.89 0.00 0.00 3.53
5176 10736 6.419710 CGGGTTCTTAAGATTGTTTGTTTTCC 59.580 38.462 5.89 0.00 0.00 3.13
5177 10737 6.074516 GCGGGTTCTTAAGATTGTTTGTTTTC 60.075 38.462 5.89 0.00 0.00 2.29
5178 10738 5.751509 GCGGGTTCTTAAGATTGTTTGTTTT 59.248 36.000 5.89 0.00 0.00 2.43
5179 10739 5.286438 GCGGGTTCTTAAGATTGTTTGTTT 58.714 37.500 5.89 0.00 0.00 2.83
5181 10741 3.254903 GGCGGGTTCTTAAGATTGTTTGT 59.745 43.478 5.89 0.00 0.00 2.83
5184 10744 3.081804 CAGGCGGGTTCTTAAGATTGTT 58.918 45.455 5.89 0.00 0.00 2.83
5185 10745 2.304761 TCAGGCGGGTTCTTAAGATTGT 59.695 45.455 5.89 0.00 0.00 2.71
5186 10746 2.985896 TCAGGCGGGTTCTTAAGATTG 58.014 47.619 5.89 0.00 0.00 2.67
5199 10862 0.036875 AGGAGAAAAGGTTCAGGCGG 59.963 55.000 0.00 0.00 36.09 6.13
5200 10863 1.897560 AAGGAGAAAAGGTTCAGGCG 58.102 50.000 0.00 0.00 36.09 5.52
5208 10871 9.937175 CTAATTCGCTATAAAAAGGAGAAAAGG 57.063 33.333 0.00 0.00 0.00 3.11
5249 10912 0.584876 GCCAGTGAACACGTTACCAC 59.415 55.000 0.00 0.00 36.20 4.16
5293 10959 4.142687 CGGAGCCACGTCAGATTTTTATTT 60.143 41.667 0.00 0.00 0.00 1.40
5294 10960 3.374058 CGGAGCCACGTCAGATTTTTATT 59.626 43.478 0.00 0.00 0.00 1.40
5295 10961 2.936498 CGGAGCCACGTCAGATTTTTAT 59.064 45.455 0.00 0.00 0.00 1.40
5300 10994 0.103208 GATCGGAGCCACGTCAGATT 59.897 55.000 0.00 0.00 32.29 2.40
5306 11000 2.680352 ACAGGATCGGAGCCACGT 60.680 61.111 15.64 8.29 34.94 4.49
5323 11017 1.317613 AGTTTGCACGAATCTTGGCA 58.682 45.000 0.00 0.00 0.00 4.92
5326 11020 5.295431 TGGATTAGTTTGCACGAATCTTG 57.705 39.130 9.10 0.00 42.03 3.02
5328 11022 4.759693 TGTTGGATTAGTTTGCACGAATCT 59.240 37.500 9.10 0.00 42.03 2.40
5329 11023 5.041951 TGTTGGATTAGTTTGCACGAATC 57.958 39.130 0.00 0.00 41.78 2.52
5330 11024 4.759693 TCTGTTGGATTAGTTTGCACGAAT 59.240 37.500 0.00 0.00 31.43 3.34
5331 11025 4.130857 TCTGTTGGATTAGTTTGCACGAA 58.869 39.130 0.00 0.00 0.00 3.85
5332 11026 3.734463 TCTGTTGGATTAGTTTGCACGA 58.266 40.909 0.00 0.00 0.00 4.35
5333 11027 4.213270 TCTTCTGTTGGATTAGTTTGCACG 59.787 41.667 0.00 0.00 0.00 5.34
5351 11045 0.387878 CAGCGAACGTGCTCTCTTCT 60.388 55.000 0.00 0.00 45.23 2.85
5412 11117 6.554419 GCTTGCCTTTTCATTTTGTCTTTTT 58.446 32.000 0.00 0.00 0.00 1.94
5413 11118 5.220643 CGCTTGCCTTTTCATTTTGTCTTTT 60.221 36.000 0.00 0.00 0.00 2.27
5424 11129 1.851658 GAAAAGCGCTTGCCTTTTCA 58.148 45.000 25.80 0.00 40.91 2.69
5437 11142 2.049156 GGCTGCCAACCGAAAAGC 60.049 61.111 15.17 0.00 0.00 3.51
5521 11269 2.887568 CACGCCTCACCTGATCGC 60.888 66.667 0.00 0.00 0.00 4.58
5535 11283 4.522169 CATTCGTCGCGTCGCACG 62.522 66.667 25.72 25.72 45.88 5.34
5536 11284 4.191485 CCATTCGTCGCGTCGCAC 62.191 66.667 20.62 13.09 0.00 5.34
5540 11288 3.083600 CTTGCCCATTCGTCGCGTC 62.084 63.158 5.77 0.00 0.00 5.19
5541 11289 3.118454 CTTGCCCATTCGTCGCGT 61.118 61.111 5.77 0.00 0.00 6.01
5542 11290 1.906994 TTTCTTGCCCATTCGTCGCG 61.907 55.000 0.00 0.00 0.00 5.87
5543 11291 0.454452 GTTTCTTGCCCATTCGTCGC 60.454 55.000 0.00 0.00 0.00 5.19
5544 11292 0.168128 GGTTTCTTGCCCATTCGTCG 59.832 55.000 0.00 0.00 0.00 5.12
5545 11293 0.168128 CGGTTTCTTGCCCATTCGTC 59.832 55.000 0.00 0.00 0.00 4.20
5546 11294 1.241315 CCGGTTTCTTGCCCATTCGT 61.241 55.000 0.00 0.00 0.00 3.85
5547 11295 1.506262 CCGGTTTCTTGCCCATTCG 59.494 57.895 0.00 0.00 0.00 3.34
5548 11296 0.610785 TCCCGGTTTCTTGCCCATTC 60.611 55.000 0.00 0.00 0.00 2.67
5549 11297 0.041090 ATCCCGGTTTCTTGCCCATT 59.959 50.000 0.00 0.00 0.00 3.16
5550 11298 0.395724 GATCCCGGTTTCTTGCCCAT 60.396 55.000 0.00 0.00 0.00 4.00
5551 11299 1.001393 GATCCCGGTTTCTTGCCCA 60.001 57.895 0.00 0.00 0.00 5.36
5552 11300 2.112815 CGATCCCGGTTTCTTGCCC 61.113 63.158 0.00 0.00 0.00 5.36
5553 11301 0.463833 ATCGATCCCGGTTTCTTGCC 60.464 55.000 0.00 0.00 36.24 4.52
5554 11302 0.938008 GATCGATCCCGGTTTCTTGC 59.062 55.000 14.76 0.00 36.24 4.01
5555 11303 2.604046 AGATCGATCCCGGTTTCTTG 57.396 50.000 21.66 0.00 36.24 3.02
5556 11304 2.034305 CGTAGATCGATCCCGGTTTCTT 59.966 50.000 21.66 2.60 42.86 2.52
5557 11305 1.607628 CGTAGATCGATCCCGGTTTCT 59.392 52.381 21.66 3.94 42.86 2.52
5558 11306 1.929482 GCGTAGATCGATCCCGGTTTC 60.929 57.143 26.62 12.96 42.86 2.78
5559 11307 0.031721 GCGTAGATCGATCCCGGTTT 59.968 55.000 26.62 11.26 42.86 3.27
5575 11323 0.806102 GTCGCCATGAGTGTATGCGT 60.806 55.000 9.50 0.00 32.97 5.24
5584 11332 2.944557 CGTCGTCGTCGCCATGAG 60.945 66.667 0.00 0.00 36.96 2.90
5624 11372 2.107041 AATGGTGCCGTGGTCGAAGA 62.107 55.000 0.00 0.00 39.71 2.87
5625 11373 1.635663 GAATGGTGCCGTGGTCGAAG 61.636 60.000 0.00 0.00 39.71 3.79
5626 11374 1.669760 GAATGGTGCCGTGGTCGAA 60.670 57.895 0.00 0.00 39.71 3.71
5627 11375 2.047655 GAATGGTGCCGTGGTCGA 60.048 61.111 0.00 0.00 39.71 4.20
5628 11376 2.047274 AGAATGGTGCCGTGGTCG 60.047 61.111 0.00 0.00 0.00 4.79
5629 11377 2.690778 GCAGAATGGTGCCGTGGTC 61.691 63.158 0.00 0.00 37.49 4.02
5630 11378 2.672996 GCAGAATGGTGCCGTGGT 60.673 61.111 0.00 0.00 37.49 4.16
5631 11379 2.672651 TGCAGAATGGTGCCGTGG 60.673 61.111 0.00 0.00 43.28 4.94
5632 11380 2.872557 CTGCAGAATGGTGCCGTG 59.127 61.111 8.42 0.00 43.28 4.94
5633 11381 3.058160 GCTGCAGAATGGTGCCGT 61.058 61.111 20.43 0.00 43.28 5.68
5634 11382 4.170062 CGCTGCAGAATGGTGCCG 62.170 66.667 20.43 4.64 43.28 5.69
5635 11383 3.818787 CCGCTGCAGAATGGTGCC 61.819 66.667 20.43 0.00 43.28 5.01
5636 11384 2.747460 TCCGCTGCAGAATGGTGC 60.747 61.111 20.43 0.00 44.27 5.01
5637 11385 1.672030 TGTCCGCTGCAGAATGGTG 60.672 57.895 20.43 0.00 35.86 4.17
5638 11386 1.672356 GTGTCCGCTGCAGAATGGT 60.672 57.895 20.43 0.00 35.86 3.55
5639 11387 2.401766 GGTGTCCGCTGCAGAATGG 61.402 63.158 20.43 15.64 35.86 3.16
5640 11388 2.743752 CGGTGTCCGCTGCAGAATG 61.744 63.158 20.43 5.94 41.17 2.67
5641 11389 2.434884 CGGTGTCCGCTGCAGAAT 60.435 61.111 20.43 0.00 41.17 2.40
5642 11390 4.680237 CCGGTGTCCGCTGCAGAA 62.680 66.667 20.43 0.00 46.86 3.02
5665 11413 3.426568 GCGCTTGGTGCTCCTCAC 61.427 66.667 0.00 0.00 44.90 3.51
5718 11469 0.677842 AACTAACAAGGGCGTCGTCT 59.322 50.000 0.00 0.00 0.00 4.18
5771 13176 0.615331 ATCACACGGTCCTCAGCATT 59.385 50.000 0.00 0.00 0.00 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.