Multiple sequence alignment - TraesCS7D01G457300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G457300 chr7D 100.000 4110 0 0 1 4110 575693402 575689293 0.000000e+00 7590.0
1 TraesCS7D01G457300 chr7D 93.743 879 24 4 1 850 614210221 614211097 0.000000e+00 1290.0
2 TraesCS7D01G457300 chr7D 80.450 1601 207 55 1480 3031 575742988 575741445 0.000000e+00 1125.0
3 TraesCS7D01G457300 chr7D 94.058 690 20 3 179 849 580546709 580547396 0.000000e+00 1027.0
4 TraesCS7D01G457300 chr7D 97.471 435 9 1 1 435 583938510 583938942 0.000000e+00 741.0
5 TraesCS7D01G457300 chr7D 97.241 435 10 1 1 435 32709811 32709379 0.000000e+00 736.0
6 TraesCS7D01G457300 chr7D 97.337 413 7 3 3061 3472 500285807 500285398 0.000000e+00 699.0
7 TraesCS7D01G457300 chr7D 90.361 415 36 4 3059 3472 620115666 620116077 3.610000e-150 542.0
8 TraesCS7D01G457300 chr7D 85.484 310 22 8 1021 1309 575774767 575774460 6.680000e-78 302.0
9 TraesCS7D01G457300 chr7D 78.870 478 64 24 854 1304 575821517 575821050 5.200000e-74 289.0
10 TraesCS7D01G457300 chr7D 84.496 258 34 4 3856 4108 29726566 29726310 2.450000e-62 250.0
11 TraesCS7D01G457300 chr7D 93.137 102 7 0 1854 1955 575820459 575820358 2.560000e-32 150.0
12 TraesCS7D01G457300 chr7D 92.000 75 5 1 852 926 575756705 575756632 2.020000e-18 104.0
13 TraesCS7D01G457300 chr7D 91.045 67 6 0 2233 2299 575820090 575820024 1.570000e-14 91.6
14 TraesCS7D01G457300 chr7A 91.352 1538 102 18 1509 3035 666212992 666211475 0.000000e+00 2074.0
15 TraesCS7D01G457300 chr7A 91.621 549 27 3 3563 4110 666211433 666210903 0.000000e+00 741.0
16 TraesCS7D01G457300 chr7A 87.179 585 46 12 902 1479 666213696 666213134 4.480000e-179 638.0
17 TraesCS7D01G457300 chr7A 80.177 903 109 35 1520 2399 666506630 666505775 2.720000e-171 612.0
18 TraesCS7D01G457300 chr7A 88.235 442 47 5 3044 3483 10282825 10282387 1.310000e-144 523.0
19 TraesCS7D01G457300 chr7A 83.128 486 37 19 854 1310 666590839 666590370 6.400000e-108 401.0
20 TraesCS7D01G457300 chr7A 80.550 509 53 27 854 1321 666507420 666506917 2.350000e-92 350.0
21 TraesCS7D01G457300 chr7A 80.318 503 43 25 852 1309 666569044 666568553 3.060000e-86 329.0
22 TraesCS7D01G457300 chr7A 86.719 128 15 2 1832 1959 666589895 666589770 1.540000e-29 141.0
23 TraesCS7D01G457300 chr7A 91.667 72 6 0 2228 2299 666589515 666589444 2.610000e-17 100.0
24 TraesCS7D01G457300 chr3D 93.665 884 24 13 1 857 550752242 550753120 0.000000e+00 1293.0
25 TraesCS7D01G457300 chr3D 88.564 411 42 3 3061 3470 43717619 43718025 1.030000e-135 494.0
26 TraesCS7D01G457300 chr5D 93.508 878 25 6 1 850 37863441 37862568 0.000000e+00 1277.0
27 TraesCS7D01G457300 chr5D 92.517 882 32 6 1 850 449683241 449684120 0.000000e+00 1232.0
28 TraesCS7D01G457300 chr5D 92.567 861 32 15 1 861 397397546 397396718 0.000000e+00 1206.0
29 TraesCS7D01G457300 chr5D 95.181 415 11 6 3061 3472 498858699 498859107 0.000000e+00 647.0
30 TraesCS7D01G457300 chr5D 91.688 397 33 0 3076 3472 367438745 367439141 6.000000e-153 551.0
31 TraesCS7D01G457300 chr5D 91.729 399 30 2 3076 3472 445486488 445486885 6.000000e-153 551.0
32 TraesCS7D01G457300 chr5D 89.500 400 35 3 3076 3475 397882756 397882364 2.210000e-137 499.0
33 TraesCS7D01G457300 chrUn 92.938 878 31 12 1 850 190763831 190764705 0.000000e+00 1249.0
34 TraesCS7D01G457300 chrUn 97.701 435 7 2 1 435 27682589 27683020 0.000000e+00 745.0
35 TraesCS7D01G457300 chrUn 78.604 659 92 27 1516 2168 86902105 86902720 1.390000e-104 390.0
36 TraesCS7D01G457300 chrUn 83.614 415 60 6 3061 3472 76830960 76831369 2.320000e-102 383.0
37 TraesCS7D01G457300 chrUn 83.614 415 60 6 3061 3472 241635037 241635446 2.320000e-102 383.0
38 TraesCS7D01G457300 chrUn 82.583 333 47 10 3118 3445 131399417 131399091 2.420000e-72 283.0
39 TraesCS7D01G457300 chrUn 79.587 387 53 21 3080 3454 76831350 76830978 1.900000e-63 254.0
40 TraesCS7D01G457300 chrUn 79.587 387 53 21 3080 3454 241635427 241635055 1.900000e-63 254.0
41 TraesCS7D01G457300 chrUn 84.556 259 34 4 3855 4108 49175899 49175642 6.820000e-63 252.0
42 TraesCS7D01G457300 chrUn 84.556 259 34 4 3855 4108 252592769 252592512 6.820000e-63 252.0
43 TraesCS7D01G457300 chrUn 87.500 216 24 2 3888 4103 10529721 10529933 3.170000e-61 246.0
44 TraesCS7D01G457300 chrUn 82.909 275 33 10 2164 2431 86902748 86903015 6.870000e-58 235.0
45 TraesCS7D01G457300 chrUn 82.558 258 40 4 3855 4108 233514437 233514693 5.350000e-54 222.0
46 TraesCS7D01G457300 chrUn 89.474 114 11 1 1208 1321 86901714 86901826 4.280000e-30 143.0
47 TraesCS7D01G457300 chrUn 100.000 32 0 0 3061 3092 332817118 332817087 4.440000e-05 60.2
48 TraesCS7D01G457300 chrUn 100.000 32 0 0 3061 3092 332825494 332825463 4.440000e-05 60.2
49 TraesCS7D01G457300 chrUn 100.000 32 0 0 3061 3092 343435912 343435943 4.440000e-05 60.2
50 TraesCS7D01G457300 chrUn 96.774 31 1 0 3062 3092 22334994 22334964 7.000000e-03 52.8
51 TraesCS7D01G457300 chr1D 91.816 892 43 4 1 864 460819983 460820872 0.000000e+00 1216.0
52 TraesCS7D01G457300 chr1D 97.471 435 9 1 1 435 482393858 482394290 0.000000e+00 741.0
53 TraesCS7D01G457300 chr1D 97.267 439 6 3 1 435 79125458 79125894 0.000000e+00 739.0
54 TraesCS7D01G457300 chr1D 96.867 415 11 2 3059 3472 53867862 53867449 0.000000e+00 693.0
55 TraesCS7D01G457300 chr1D 94.802 404 16 5 3076 3477 342791455 342791855 3.490000e-175 625.0
56 TraesCS7D01G457300 chr1D 90.955 398 34 2 3076 3472 397218012 397217616 6.050000e-148 534.0
57 TraesCS7D01G457300 chr1D 90.576 382 22 12 3079 3454 349344864 349344491 1.030000e-135 494.0
58 TraesCS7D01G457300 chr1D 88.442 398 40 5 3076 3472 462353899 462353507 3.720000e-130 475.0
59 TraesCS7D01G457300 chr1D 88.665 397 30 3 3076 3472 400411472 400411853 1.730000e-128 470.0
60 TraesCS7D01G457300 chr1D 87.469 399 45 5 3076 3473 38590051 38589657 4.840000e-124 455.0
61 TraesCS7D01G457300 chr1D 85.577 416 57 3 3060 3474 427487580 427487167 2.270000e-117 433.0
62 TraesCS7D01G457300 chr1D 87.037 216 26 1 3893 4108 461900351 461900564 4.100000e-60 243.0
63 TraesCS7D01G457300 chr1D 83.898 236 36 2 3873 4108 486402031 486402264 1.490000e-54 224.0
64 TraesCS7D01G457300 chr1D 82.353 255 33 9 3852 4103 452590448 452590203 1.160000e-50 211.0
65 TraesCS7D01G457300 chr4A 91.923 879 38 6 3 850 622371968 622372844 0.000000e+00 1199.0
66 TraesCS7D01G457300 chr7B 89.111 900 55 16 1479 2375 637823193 637822334 0.000000e+00 1079.0
67 TraesCS7D01G457300 chr7B 92.609 663 42 6 2404 3065 637822333 637821677 0.000000e+00 946.0
68 TraesCS7D01G457300 chr7B 92.747 455 17 9 852 1304 637823959 637823519 0.000000e+00 643.0
69 TraesCS7D01G457300 chr7B 94.072 388 23 0 2648 3035 637869183 637868796 1.270000e-164 590.0
70 TraesCS7D01G457300 chr7B 94.118 204 12 0 3563 3766 637868754 637868551 1.110000e-80 311.0
71 TraesCS7D01G457300 chr7B 89.394 198 18 3 1111 1307 637916367 637916172 3.170000e-61 246.0
72 TraesCS7D01G457300 chr7B 90.206 194 7 5 3562 3754 637821671 637821489 4.100000e-60 243.0
73 TraesCS7D01G457300 chr7B 84.656 189 20 8 854 1042 637879924 637879745 3.260000e-41 180.0
74 TraesCS7D01G457300 chr7B 85.405 185 12 3 1295 1479 637823482 637823313 1.170000e-40 178.0
75 TraesCS7D01G457300 chr7B 74.380 484 77 34 1830 2299 637950430 637949980 3.290000e-36 163.0
76 TraesCS7D01G457300 chr7B 89.091 110 2 4 852 959 637880218 637880117 1.200000e-25 128.0
77 TraesCS7D01G457300 chr7B 85.124 121 15 3 1111 1230 637892601 637892483 2.010000e-23 121.0
78 TraesCS7D01G457300 chr7B 87.500 96 6 2 854 943 637960265 637960170 5.620000e-19 106.0
79 TraesCS7D01G457300 chr7B 75.889 253 32 17 2769 3016 552348139 552348367 7.270000e-18 102.0
80 TraesCS7D01G457300 chr7B 98.246 57 1 0 2918 2974 726800892 726800836 2.610000e-17 100.0
81 TraesCS7D01G457300 chr2D 88.235 867 74 16 1 850 605465870 605465015 0.000000e+00 1011.0
82 TraesCS7D01G457300 chr2D 97.701 435 8 1 1 435 12614382 12614814 0.000000e+00 747.0
83 TraesCS7D01G457300 chr6D 97.691 433 8 1 1 433 409499825 409499395 0.000000e+00 743.0
84 TraesCS7D01G457300 chr6D 97.573 412 9 1 3061 3472 464217754 464217344 0.000000e+00 704.0
85 TraesCS7D01G457300 chr6D 91.436 397 33 1 3076 3472 87081012 87080617 1.000000e-150 544.0
86 TraesCS7D01G457300 chr6D 91.375 371 30 2 3076 3445 4627591 4627960 1.320000e-139 507.0
87 TraesCS7D01G457300 chr6D 88.945 398 41 3 3076 3472 34292182 34291787 4.780000e-134 488.0
88 TraesCS7D01G457300 chr6D 88.750 400 41 4 3076 3473 335994022 335993625 1.720000e-133 486.0
89 TraesCS7D01G457300 chr6D 87.330 221 26 1 3888 4108 424671979 424671761 6.820000e-63 252.0
90 TraesCS7D01G457300 chr4D 87.799 418 42 9 3058 3472 455087746 455087335 7.990000e-132 481.0
91 TraesCS7D01G457300 chr4D 87.958 382 33 7 3076 3445 66306805 66306425 4.880000e-119 438.0
92 TraesCS7D01G457300 chr4D 84.498 329 35 11 3105 3425 66306445 66306765 1.110000e-80 311.0
93 TraesCS7D01G457300 chr4D 85.593 236 32 2 3873 4108 443712634 443712867 3.170000e-61 246.0
94 TraesCS7D01G457300 chr4D 83.843 229 35 2 3881 4108 509425468 509425241 2.490000e-52 217.0
95 TraesCS7D01G457300 chr4D 82.101 257 40 3 3855 4107 69125408 69125154 8.950000e-52 215.0
96 TraesCS7D01G457300 chr4D 78.451 297 55 9 3815 4108 48062197 48061907 7.020000e-43 185.0
97 TraesCS7D01G457300 chr4D 74.249 233 46 12 3076 3301 25214429 25214204 7.320000e-13 86.1
98 TraesCS7D01G457300 chr4B 86.555 238 31 1 3872 4108 664910998 664910761 1.130000e-65 261.0
99 TraesCS7D01G457300 chr4B 85.593 236 34 0 3873 4108 603183796 603184031 8.820000e-62 248.0
100 TraesCS7D01G457300 chr4B 84.170 259 35 4 3855 4108 37870548 37870291 3.170000e-61 246.0
101 TraesCS7D01G457300 chr4B 87.156 218 26 2 3888 4104 448883537 448883321 3.170000e-61 246.0
102 TraesCS7D01G457300 chr4B 83.784 259 36 4 3855 4108 81363157 81362900 1.480000e-59 241.0
103 TraesCS7D01G457300 chr1B 84.556 259 34 4 3855 4108 6249532 6249789 6.820000e-63 252.0
104 TraesCS7D01G457300 chr1B 91.935 62 3 1 2920 2981 178194631 178194572 7.320000e-13 86.1
105 TraesCS7D01G457300 chr6B 84.436 257 37 2 3855 4108 679677657 679677401 2.450000e-62 250.0
106 TraesCS7D01G457300 chr6B 96.825 63 2 0 2920 2982 364933472 364933534 5.620000e-19 106.0
107 TraesCS7D01G457300 chr6B 93.846 65 4 0 2917 2981 636374679 636374743 9.400000e-17 99.0
108 TraesCS7D01G457300 chr2B 84.436 257 34 5 3857 4108 543196062 543196317 8.820000e-62 248.0
109 TraesCS7D01G457300 chr2B 95.161 62 3 0 2920 2981 768770651 768770590 9.400000e-17 99.0
110 TraesCS7D01G457300 chr5B 88.095 210 22 3 3895 4103 375459735 375459528 3.170000e-61 246.0
111 TraesCS7D01G457300 chr2A 84.047 257 37 3 3855 4108 214238817 214239072 1.140000e-60 244.0
112 TraesCS7D01G457300 chr2A 85.000 60 7 2 1876 1934 656967813 656967755 4.440000e-05 60.2
113 TraesCS7D01G457300 chr1A 91.935 62 3 1 2920 2981 18151844 18151785 7.320000e-13 86.1
114 TraesCS7D01G457300 chr1A 94.872 39 1 1 3055 3092 63851506 63851468 4.440000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G457300 chr7D 575689293 575693402 4109 True 7590.0 7590 100.000000 1 4110 1 chr7D.!!$R4 4109
1 TraesCS7D01G457300 chr7D 614210221 614211097 876 False 1290.0 1290 93.743000 1 850 1 chr7D.!!$F3 849
2 TraesCS7D01G457300 chr7D 575741445 575742988 1543 True 1125.0 1125 80.450000 1480 3031 1 chr7D.!!$R5 1551
3 TraesCS7D01G457300 chr7D 580546709 580547396 687 False 1027.0 1027 94.058000 179 849 1 chr7D.!!$F1 670
4 TraesCS7D01G457300 chr7A 666210903 666213696 2793 True 1151.0 2074 90.050667 902 4110 3 chr7A.!!$R3 3208
5 TraesCS7D01G457300 chr7A 666505775 666507420 1645 True 481.0 612 80.363500 854 2399 2 chr7A.!!$R4 1545
6 TraesCS7D01G457300 chr7A 666589444 666590839 1395 True 214.0 401 87.171333 854 2299 3 chr7A.!!$R5 1445
7 TraesCS7D01G457300 chr3D 550752242 550753120 878 False 1293.0 1293 93.665000 1 857 1 chr3D.!!$F2 856
8 TraesCS7D01G457300 chr5D 37862568 37863441 873 True 1277.0 1277 93.508000 1 850 1 chr5D.!!$R1 849
9 TraesCS7D01G457300 chr5D 449683241 449684120 879 False 1232.0 1232 92.517000 1 850 1 chr5D.!!$F3 849
10 TraesCS7D01G457300 chr5D 397396718 397397546 828 True 1206.0 1206 92.567000 1 861 1 chr5D.!!$R2 860
11 TraesCS7D01G457300 chrUn 190763831 190764705 874 False 1249.0 1249 92.938000 1 850 1 chrUn.!!$F4 849
12 TraesCS7D01G457300 chrUn 86901714 86903015 1301 False 256.0 390 83.662333 1208 2431 3 chrUn.!!$F8 1223
13 TraesCS7D01G457300 chr1D 460819983 460820872 889 False 1216.0 1216 91.816000 1 864 1 chr1D.!!$F4 863
14 TraesCS7D01G457300 chr4A 622371968 622372844 876 False 1199.0 1199 91.923000 3 850 1 chr4A.!!$F1 847
15 TraesCS7D01G457300 chr7B 637821489 637823959 2470 True 617.8 1079 90.015600 852 3754 5 chr7B.!!$R6 2902
16 TraesCS7D01G457300 chr7B 637868551 637869183 632 True 450.5 590 94.095000 2648 3766 2 chr7B.!!$R7 1118
17 TraesCS7D01G457300 chr2D 605465015 605465870 855 True 1011.0 1011 88.235000 1 850 1 chr2D.!!$R1 849

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
596 643 0.481128 CCCAAAACCCCTACACCACT 59.519 55.0 0.00 0.0 0.0 4.00 F
1557 1896 0.179059 TTGCTGCTCAAGGACGTCAA 60.179 50.0 18.91 0.0 0.0 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2239 2745 0.249398 CTGAAAACCCCCTCGATCGT 59.751 55.0 15.94 0.0 0.00 3.73 R
3179 3748 0.039256 GATTTTTGCAGCGCACCTCA 60.039 50.0 11.47 0.0 38.71 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
87 90 4.042809 TCATAAGGAGGTTCTTGGAAGCAA 59.957 41.667 11.19 0.00 0.00 3.91
88 91 3.312736 AAGGAGGTTCTTGGAAGCAAA 57.687 42.857 11.19 0.00 0.00 3.68
143 146 6.955364 GGATGATCTCCATTCTCCATAATGA 58.045 40.000 6.39 0.00 44.26 2.57
152 155 6.612863 TCCATTCTCCATAATGAAGAGTCAGA 59.387 38.462 0.00 0.00 38.84 3.27
460 497 8.308931 AGTTTGGATTGTACTACTTTCGACATA 58.691 33.333 0.00 0.00 0.00 2.29
590 637 2.997070 TTAACCCCCAAAACCCCTAC 57.003 50.000 0.00 0.00 0.00 3.18
596 643 0.481128 CCCAAAACCCCTACACCACT 59.519 55.000 0.00 0.00 0.00 4.00
602 649 1.359168 ACCCCTACACCACTTCCTTC 58.641 55.000 0.00 0.00 0.00 3.46
637 692 1.900585 GCTGAAATGCTGACGCGTGA 61.901 55.000 20.70 7.67 39.65 4.35
652 707 2.084546 GCGTGAAAGCTTATTGGTCCT 58.915 47.619 0.00 0.00 0.00 3.85
757 812 6.855763 TTGTATAAGAACCGGGACTAAAGA 57.144 37.500 6.32 0.00 0.00 2.52
777 832 4.481072 AGACCTAGGGCATTAGTAACGAT 58.519 43.478 19.45 0.00 0.00 3.73
784 839 6.243216 AGGGCATTAGTAACGATCCTTTAA 57.757 37.500 0.00 0.00 0.00 1.52
794 849 2.770232 ACGATCCTTTAATCCCGGTTCT 59.230 45.455 0.00 0.00 0.00 3.01
850 905 4.462834 ACAAATGGGCCTTTTTCTACTAGC 59.537 41.667 14.22 0.00 0.00 3.42
896 951 3.162666 TGACTGGACTAGGTCACGAAAT 58.837 45.455 0.00 0.00 37.52 2.17
913 980 4.020662 ACGAAATTCAGCCTTCTCTCTCTT 60.021 41.667 0.00 0.00 0.00 2.85
943 1010 3.534554 TCTCCGATTCACACATTCCATG 58.465 45.455 0.00 0.00 0.00 3.66
1042 1113 6.019656 ACTCTCTCTCTCTCTCTCTCTCTA 57.980 45.833 0.00 0.00 0.00 2.43
1088 1178 2.767960 TGGAGAAGCATCATCAGCTGTA 59.232 45.455 14.67 0.48 42.53 2.74
1091 1181 3.139850 AGAAGCATCATCAGCTGTATGC 58.860 45.455 28.31 28.31 42.53 3.14
1199 1321 2.125269 GGCGTCCGGCAGTACAAT 60.125 61.111 8.48 0.00 46.16 2.71
1211 1333 0.449388 AGTACAATCGGTCGGACGAC 59.551 55.000 15.90 15.90 46.64 4.34
1421 1618 6.690530 TGGTGATTCCATTGATTTTTCACTC 58.309 36.000 0.00 0.00 41.93 3.51
1432 1629 3.653539 TTTTTCACTCTCGGACGATCA 57.346 42.857 0.00 0.00 0.00 2.92
1443 1640 3.511699 TCGGACGATCAATCTGTTCAAG 58.488 45.455 0.00 0.00 0.00 3.02
1487 1810 6.456988 GGTGTGGATCGATTAAGATGAACAAC 60.457 42.308 0.00 0.00 29.73 3.32
1495 1818 8.357796 TCGATTAAGATGAACAACATGAGATC 57.642 34.615 0.00 0.00 39.56 2.75
1557 1896 0.179059 TTGCTGCTCAAGGACGTCAA 60.179 50.000 18.91 0.00 0.00 3.18
1559 1898 0.723981 GCTGCTCAAGGACGTCAATC 59.276 55.000 18.91 0.00 0.00 2.67
1732 2102 3.470645 AGCGTGTGTATCCTTAATCCC 57.529 47.619 0.00 0.00 0.00 3.85
1742 2112 1.967779 TCCTTAATCCCGCATCGATCA 59.032 47.619 0.00 0.00 0.00 2.92
1778 2205 5.579511 TCTCTCGATCCGAATTTTAACCAAC 59.420 40.000 0.00 0.00 34.74 3.77
1787 2214 5.627780 CCGAATTTTAACCAACAGTAGCAAC 59.372 40.000 0.00 0.00 0.00 4.17
1800 2227 3.060602 AGTAGCAACTCTTTCTTCACGC 58.939 45.455 0.00 0.00 0.00 5.34
1801 2228 1.230324 AGCAACTCTTTCTTCACGCC 58.770 50.000 0.00 0.00 0.00 5.68
1828 2262 1.166531 GGCTGGTCTGGTGTTGACAC 61.167 60.000 5.72 5.72 45.72 3.67
1950 2386 4.713814 TCTCCAGATGTACAGATCAAGCTT 59.286 41.667 0.33 0.00 0.00 3.74
2133 2587 0.314935 TCGTCTCCACCGTACCAAAC 59.685 55.000 0.00 0.00 0.00 2.93
2162 2621 5.226194 ACCAAAAATGGCTGCTAATTCAA 57.774 34.783 0.00 0.00 0.00 2.69
2239 2745 0.032952 GTACTGGTTGTGCAGTCCGA 59.967 55.000 0.00 0.00 33.26 4.55
2249 2755 2.716244 CAGTCCGACGATCGAGGG 59.284 66.667 24.34 20.97 43.74 4.30
2327 2833 4.402793 GCCATCAGAGAAGGTAGAAGTACA 59.597 45.833 0.00 0.00 0.00 2.90
2436 2967 4.518970 AGAGGAAGCAAAGATTACGCAAAA 59.481 37.500 0.00 0.00 0.00 2.44
2576 3123 2.746277 GTTAGGTGGCAGGCACCG 60.746 66.667 34.17 0.00 46.77 4.94
2632 3183 2.104253 CCGTGTATTGACCGCCCAC 61.104 63.158 0.00 0.00 0.00 4.61
2710 3262 1.743995 GTTATTGCAGGCGACCGGT 60.744 57.895 6.92 6.92 0.00 5.28
2712 3264 1.022451 TTATTGCAGGCGACCGGTTC 61.022 55.000 9.42 3.50 0.00 3.62
2739 3291 1.143838 ACGCTGACAGCAGAACACA 59.856 52.632 26.32 0.00 45.17 3.72
2751 3306 3.931468 AGCAGAACACATCAGAAGAATCG 59.069 43.478 0.00 0.00 0.00 3.34
2818 3373 3.785859 GAGGAGGCCATGGTCGCA 61.786 66.667 22.13 0.00 0.00 5.10
2860 3415 1.139734 CATGACCACGGAGGAGTCG 59.860 63.158 2.94 0.00 41.22 4.18
2894 3449 2.519780 GGGATCGAGGAGCCGACT 60.520 66.667 0.00 0.00 39.27 4.18
3039 3608 7.228314 TGTATGTAAAGTTACTCACAGCTCT 57.772 36.000 6.07 0.00 34.77 4.09
3061 3630 8.812329 GCTCTTCATATAGCTATCAATTTACCG 58.188 37.037 10.16 0.00 35.80 4.02
3072 3641 9.003658 AGCTATCAATTTACCGATAATTCAAGG 57.996 33.333 0.00 0.00 0.00 3.61
3073 3642 7.750903 GCTATCAATTTACCGATAATTCAAGGC 59.249 37.037 0.00 0.00 0.00 4.35
3074 3643 7.581213 ATCAATTTACCGATAATTCAAGGCA 57.419 32.000 0.00 0.00 0.00 4.75
3075 3644 7.026631 TCAATTTACCGATAATTCAAGGCAG 57.973 36.000 0.00 0.00 0.00 4.85
3076 3645 6.826231 TCAATTTACCGATAATTCAAGGCAGA 59.174 34.615 0.00 0.00 0.00 4.26
3077 3646 6.867662 ATTTACCGATAATTCAAGGCAGAG 57.132 37.500 0.00 0.00 0.00 3.35
3078 3647 2.565841 ACCGATAATTCAAGGCAGAGC 58.434 47.619 0.00 0.00 0.00 4.09
3095 3664 4.864334 CCCGGGCTCAGATGCACC 62.864 72.222 8.08 0.00 31.60 5.01
3096 3665 3.790437 CCGGGCTCAGATGCACCT 61.790 66.667 0.00 0.00 31.60 4.00
3097 3666 2.513204 CGGGCTCAGATGCACCTG 60.513 66.667 0.00 0.00 31.60 4.00
3098 3667 2.673523 GGGCTCAGATGCACCTGT 59.326 61.111 8.25 0.00 35.71 4.00
3099 3668 1.001641 GGGCTCAGATGCACCTGTT 60.002 57.895 8.25 0.00 35.71 3.16
3100 3669 1.028868 GGGCTCAGATGCACCTGTTC 61.029 60.000 8.25 0.70 35.71 3.18
3101 3670 0.321919 GGCTCAGATGCACCTGTTCA 60.322 55.000 8.25 0.00 35.71 3.18
3102 3671 1.085091 GCTCAGATGCACCTGTTCAG 58.915 55.000 8.25 0.00 35.71 3.02
3103 3672 1.085091 CTCAGATGCACCTGTTCAGC 58.915 55.000 8.25 0.00 35.71 4.26
3104 3673 0.397564 TCAGATGCACCTGTTCAGCA 59.602 50.000 8.25 0.00 43.14 4.41
3105 3674 1.202794 TCAGATGCACCTGTTCAGCAA 60.203 47.619 8.25 0.00 42.15 3.91
3106 3675 1.610038 CAGATGCACCTGTTCAGCAAA 59.390 47.619 0.00 0.00 42.15 3.68
3107 3676 2.034939 CAGATGCACCTGTTCAGCAAAA 59.965 45.455 0.00 0.00 42.15 2.44
3108 3677 2.694628 AGATGCACCTGTTCAGCAAAAA 59.305 40.909 0.00 0.00 42.15 1.94
3174 3743 8.459911 AAAATTTCGGGTGGTAGATAATTAGG 57.540 34.615 0.00 0.00 0.00 2.69
3175 3744 6.758806 ATTTCGGGTGGTAGATAATTAGGT 57.241 37.500 0.00 0.00 0.00 3.08
3176 3745 5.540400 TTCGGGTGGTAGATAATTAGGTG 57.460 43.478 0.00 0.00 0.00 4.00
3177 3746 3.322828 TCGGGTGGTAGATAATTAGGTGC 59.677 47.826 0.00 0.00 0.00 5.01
3178 3747 3.660865 GGGTGGTAGATAATTAGGTGCG 58.339 50.000 0.00 0.00 0.00 5.34
3179 3748 3.070590 GGGTGGTAGATAATTAGGTGCGT 59.929 47.826 0.00 0.00 0.00 5.24
3180 3749 4.056050 GGTGGTAGATAATTAGGTGCGTG 58.944 47.826 0.00 0.00 0.00 5.34
3181 3750 4.202182 GGTGGTAGATAATTAGGTGCGTGA 60.202 45.833 0.00 0.00 0.00 4.35
3182 3751 4.982916 GTGGTAGATAATTAGGTGCGTGAG 59.017 45.833 0.00 0.00 0.00 3.51
3183 3752 4.038763 TGGTAGATAATTAGGTGCGTGAGG 59.961 45.833 0.00 0.00 0.00 3.86
3184 3753 4.038883 GGTAGATAATTAGGTGCGTGAGGT 59.961 45.833 0.00 0.00 0.00 3.85
3185 3754 4.060038 AGATAATTAGGTGCGTGAGGTG 57.940 45.455 0.00 0.00 0.00 4.00
3186 3755 2.018542 TAATTAGGTGCGTGAGGTGC 57.981 50.000 0.00 0.00 0.00 5.01
3187 3756 1.019278 AATTAGGTGCGTGAGGTGCG 61.019 55.000 0.00 0.00 34.24 5.34
3194 3763 3.648982 CGTGAGGTGCGCTGCAAA 61.649 61.111 9.73 0.00 41.47 3.68
3195 3764 2.721231 GTGAGGTGCGCTGCAAAA 59.279 55.556 9.73 0.00 41.47 2.44
3196 3765 1.065600 GTGAGGTGCGCTGCAAAAA 59.934 52.632 9.73 0.00 41.47 1.94
3197 3766 0.318955 GTGAGGTGCGCTGCAAAAAT 60.319 50.000 9.73 0.00 41.47 1.82
3198 3767 0.039256 TGAGGTGCGCTGCAAAAATC 60.039 50.000 9.73 0.00 41.47 2.17
3199 3768 0.039256 GAGGTGCGCTGCAAAAATCA 60.039 50.000 9.73 0.00 41.47 2.57
3200 3769 0.388659 AGGTGCGCTGCAAAAATCAA 59.611 45.000 9.73 0.00 41.47 2.57
3201 3770 0.508213 GGTGCGCTGCAAAAATCAAC 59.492 50.000 9.73 0.00 41.47 3.18
3202 3771 1.490621 GTGCGCTGCAAAAATCAACT 58.509 45.000 9.73 0.00 41.47 3.16
3203 3772 1.453148 GTGCGCTGCAAAAATCAACTC 59.547 47.619 9.73 0.00 41.47 3.01
3204 3773 0.704551 GCGCTGCAAAAATCAACTCG 59.295 50.000 0.00 0.00 0.00 4.18
3205 3774 1.925946 GCGCTGCAAAAATCAACTCGT 60.926 47.619 0.00 0.00 0.00 4.18
3206 3775 2.384382 CGCTGCAAAAATCAACTCGTT 58.616 42.857 0.00 0.00 0.00 3.85
3207 3776 2.788786 CGCTGCAAAAATCAACTCGTTT 59.211 40.909 0.00 0.00 0.00 3.60
3208 3777 3.360956 CGCTGCAAAAATCAACTCGTTTG 60.361 43.478 0.00 0.00 36.42 2.93
3209 3778 3.060339 GCTGCAAAAATCAACTCGTTTGG 60.060 43.478 0.00 0.00 35.69 3.28
3210 3779 4.358851 CTGCAAAAATCAACTCGTTTGGA 58.641 39.130 0.00 0.00 35.69 3.53
3211 3780 4.109050 TGCAAAAATCAACTCGTTTGGAC 58.891 39.130 0.00 0.00 35.69 4.02
3212 3781 4.109050 GCAAAAATCAACTCGTTTGGACA 58.891 39.130 0.00 0.00 35.69 4.02
3213 3782 4.744631 GCAAAAATCAACTCGTTTGGACAT 59.255 37.500 0.00 0.00 35.69 3.06
3214 3783 5.234116 GCAAAAATCAACTCGTTTGGACATT 59.766 36.000 0.00 0.00 35.69 2.71
3215 3784 6.238076 GCAAAAATCAACTCGTTTGGACATTT 60.238 34.615 0.00 0.00 35.69 2.32
3216 3785 6.826893 AAAATCAACTCGTTTGGACATTTG 57.173 33.333 0.69 0.00 35.69 2.32
3217 3786 5.766150 AATCAACTCGTTTGGACATTTGA 57.234 34.783 0.69 0.00 35.69 2.69
3218 3787 4.811555 TCAACTCGTTTGGACATTTGAG 57.188 40.909 0.69 0.00 35.69 3.02
3219 3788 3.003275 TCAACTCGTTTGGACATTTGAGC 59.997 43.478 0.69 0.00 35.69 4.26
3220 3789 2.571212 ACTCGTTTGGACATTTGAGCA 58.429 42.857 0.00 0.00 0.00 4.26
3221 3790 2.948979 ACTCGTTTGGACATTTGAGCAA 59.051 40.909 0.00 0.00 0.00 3.91
3222 3791 3.003689 ACTCGTTTGGACATTTGAGCAAG 59.996 43.478 0.00 0.00 0.00 4.01
3223 3792 2.948979 TCGTTTGGACATTTGAGCAAGT 59.051 40.909 0.00 0.00 0.00 3.16
3224 3793 3.003275 TCGTTTGGACATTTGAGCAAGTC 59.997 43.478 0.00 0.00 0.00 3.01
3225 3794 3.003689 CGTTTGGACATTTGAGCAAGTCT 59.996 43.478 0.00 0.00 0.00 3.24
3226 3795 4.293415 GTTTGGACATTTGAGCAAGTCTG 58.707 43.478 0.00 0.00 0.00 3.51
3227 3796 3.213206 TGGACATTTGAGCAAGTCTGT 57.787 42.857 0.00 0.00 0.00 3.41
3228 3797 2.880268 TGGACATTTGAGCAAGTCTGTG 59.120 45.455 0.00 0.00 0.00 3.66
3229 3798 2.351157 GGACATTTGAGCAAGTCTGTGC 60.351 50.000 0.00 0.00 45.28 4.57
3255 3824 7.698836 AAAAAGACAAATCGGATCAAAACAG 57.301 32.000 0.00 0.00 0.00 3.16
3256 3825 6.391227 AAAGACAAATCGGATCAAAACAGT 57.609 33.333 0.00 0.00 0.00 3.55
3257 3826 6.391227 AAGACAAATCGGATCAAAACAGTT 57.609 33.333 0.00 0.00 0.00 3.16
3258 3827 6.391227 AGACAAATCGGATCAAAACAGTTT 57.609 33.333 0.00 0.00 0.00 2.66
3259 3828 6.208644 AGACAAATCGGATCAAAACAGTTTG 58.791 36.000 0.00 0.00 44.71 2.93
3260 3829 5.901552 ACAAATCGGATCAAAACAGTTTGT 58.098 33.333 0.00 0.00 43.90 2.83
3261 3830 5.748152 ACAAATCGGATCAAAACAGTTTGTG 59.252 36.000 0.00 1.09 43.90 3.33
3262 3831 5.766150 AATCGGATCAAAACAGTTTGTGA 57.234 34.783 0.00 6.37 43.90 3.58
3263 3832 5.766150 ATCGGATCAAAACAGTTTGTGAA 57.234 34.783 0.00 0.00 43.90 3.18
3264 3833 4.915704 TCGGATCAAAACAGTTTGTGAAC 58.084 39.130 0.00 4.98 43.90 3.18
3265 3834 4.396478 TCGGATCAAAACAGTTTGTGAACA 59.604 37.500 0.00 0.00 43.90 3.18
3266 3835 4.734854 CGGATCAAAACAGTTTGTGAACAG 59.265 41.667 0.00 2.72 43.90 3.16
3267 3836 5.650543 GGATCAAAACAGTTTGTGAACAGT 58.349 37.500 0.00 0.00 43.90 3.55
3268 3837 6.457663 CGGATCAAAACAGTTTGTGAACAGTA 60.458 38.462 0.00 0.00 43.90 2.74
3269 3838 7.254852 GGATCAAAACAGTTTGTGAACAGTAA 58.745 34.615 0.00 0.00 43.90 2.24
3270 3839 7.757624 GGATCAAAACAGTTTGTGAACAGTAAA 59.242 33.333 0.00 0.00 43.90 2.01
3271 3840 7.861176 TCAAAACAGTTTGTGAACAGTAAAC 57.139 32.000 0.00 0.00 43.90 2.01
3272 3841 7.653647 TCAAAACAGTTTGTGAACAGTAAACT 58.346 30.769 0.00 9.67 43.90 2.66
3273 3842 8.138712 TCAAAACAGTTTGTGAACAGTAAACTT 58.861 29.630 0.00 5.03 43.90 2.66
3274 3843 8.760569 CAAAACAGTTTGTGAACAGTAAACTTT 58.239 29.630 0.00 6.16 41.30 2.66
3275 3844 8.880878 AAACAGTTTGTGAACAGTAAACTTTT 57.119 26.923 0.00 10.08 41.30 2.27
3276 3845 8.880878 AACAGTTTGTGAACAGTAAACTTTTT 57.119 26.923 11.65 7.66 41.30 1.94
3277 3846 8.515473 ACAGTTTGTGAACAGTAAACTTTTTC 57.485 30.769 11.65 0.00 41.30 2.29
3278 3847 8.138712 ACAGTTTGTGAACAGTAAACTTTTTCA 58.861 29.630 11.65 1.45 41.30 2.69
3279 3848 8.424731 CAGTTTGTGAACAGTAAACTTTTTCAC 58.575 33.333 18.96 18.96 41.30 3.18
3280 3849 8.138712 AGTTTGTGAACAGTAAACTTTTTCACA 58.861 29.630 22.04 22.04 45.39 3.58
3281 3850 8.424731 GTTTGTGAACAGTAAACTTTTTCACAG 58.575 33.333 23.36 0.00 46.36 3.66
3282 3851 7.441890 TGTGAACAGTAAACTTTTTCACAGA 57.558 32.000 22.04 9.70 43.92 3.41
3283 3852 7.302524 TGTGAACAGTAAACTTTTTCACAGAC 58.697 34.615 22.04 7.34 43.92 3.51
3284 3853 6.745907 GTGAACAGTAAACTTTTTCACAGACC 59.254 38.462 20.00 3.18 41.54 3.85
3285 3854 5.830000 ACAGTAAACTTTTTCACAGACCC 57.170 39.130 0.00 0.00 0.00 4.46
3286 3855 4.643334 ACAGTAAACTTTTTCACAGACCCC 59.357 41.667 0.00 0.00 0.00 4.95
3287 3856 3.881089 AGTAAACTTTTTCACAGACCCCG 59.119 43.478 0.00 0.00 0.00 5.73
3288 3857 2.721425 AACTTTTTCACAGACCCCGA 57.279 45.000 0.00 0.00 0.00 5.14
3289 3858 2.951229 ACTTTTTCACAGACCCCGAT 57.049 45.000 0.00 0.00 0.00 4.18
3290 3859 3.223674 ACTTTTTCACAGACCCCGATT 57.776 42.857 0.00 0.00 0.00 3.34
3291 3860 3.562182 ACTTTTTCACAGACCCCGATTT 58.438 40.909 0.00 0.00 0.00 2.17
3292 3861 3.958147 ACTTTTTCACAGACCCCGATTTT 59.042 39.130 0.00 0.00 0.00 1.82
3293 3862 4.202111 ACTTTTTCACAGACCCCGATTTTG 60.202 41.667 0.00 0.00 0.00 2.44
3294 3863 2.649531 TTCACAGACCCCGATTTTGT 57.350 45.000 0.00 0.00 0.00 2.83
3295 3864 2.178912 TCACAGACCCCGATTTTGTC 57.821 50.000 0.00 0.00 0.00 3.18
3296 3865 1.697432 TCACAGACCCCGATTTTGTCT 59.303 47.619 0.00 0.00 39.86 3.41
3297 3866 2.105821 TCACAGACCCCGATTTTGTCTT 59.894 45.455 0.00 0.00 37.25 3.01
3298 3867 2.884639 CACAGACCCCGATTTTGTCTTT 59.115 45.455 0.00 0.00 37.25 2.52
3299 3868 3.317993 CACAGACCCCGATTTTGTCTTTT 59.682 43.478 0.00 0.00 37.25 2.27
3300 3869 3.958147 ACAGACCCCGATTTTGTCTTTTT 59.042 39.130 0.00 0.00 37.25 1.94
3317 3886 3.865011 TTTTTGCACAGACTTGCTCAA 57.135 38.095 9.86 2.78 43.41 3.02
3318 3887 3.865011 TTTTGCACAGACTTGCTCAAA 57.135 38.095 9.86 7.06 43.41 2.69
3319 3888 4.389890 TTTTGCACAGACTTGCTCAAAT 57.610 36.364 9.86 0.00 43.41 2.32
3320 3889 3.358707 TTGCACAGACTTGCTCAAATG 57.641 42.857 9.86 0.00 43.41 2.32
3321 3890 2.300433 TGCACAGACTTGCTCAAATGT 58.700 42.857 9.86 0.00 43.41 2.71
3322 3891 2.291465 TGCACAGACTTGCTCAAATGTC 59.709 45.455 9.86 0.00 43.41 3.06
3323 3892 2.351157 GCACAGACTTGCTCAAATGTCC 60.351 50.000 0.00 0.00 39.59 4.02
3324 3893 2.880268 CACAGACTTGCTCAAATGTCCA 59.120 45.455 0.00 0.00 0.00 4.02
3325 3894 3.316029 CACAGACTTGCTCAAATGTCCAA 59.684 43.478 0.00 0.00 0.00 3.53
3326 3895 3.953612 ACAGACTTGCTCAAATGTCCAAA 59.046 39.130 0.00 0.00 0.00 3.28
3327 3896 4.202050 ACAGACTTGCTCAAATGTCCAAAC 60.202 41.667 0.00 0.00 0.00 2.93
3328 3897 3.003689 AGACTTGCTCAAATGTCCAAACG 59.996 43.478 0.00 0.00 0.00 3.60
3329 3898 2.948979 ACTTGCTCAAATGTCCAAACGA 59.051 40.909 0.00 0.00 0.00 3.85
3330 3899 3.003689 ACTTGCTCAAATGTCCAAACGAG 59.996 43.478 0.00 0.00 0.00 4.18
3331 3900 2.571212 TGCTCAAATGTCCAAACGAGT 58.429 42.857 0.00 0.00 0.00 4.18
3332 3901 2.948979 TGCTCAAATGTCCAAACGAGTT 59.051 40.909 0.00 0.00 0.00 3.01
3333 3902 3.243035 TGCTCAAATGTCCAAACGAGTTG 60.243 43.478 0.00 0.00 36.94 3.16
3334 3903 3.003275 GCTCAAATGTCCAAACGAGTTGA 59.997 43.478 5.36 0.00 39.87 3.18
3335 3904 4.320494 GCTCAAATGTCCAAACGAGTTGAT 60.320 41.667 5.36 0.00 39.87 2.57
3336 3905 5.762045 CTCAAATGTCCAAACGAGTTGATT 58.238 37.500 5.36 0.00 39.87 2.57
3337 3906 6.142818 TCAAATGTCCAAACGAGTTGATTT 57.857 33.333 5.36 2.14 39.87 2.17
3338 3907 6.568869 TCAAATGTCCAAACGAGTTGATTTT 58.431 32.000 5.36 0.00 39.87 1.82
3339 3908 7.038659 TCAAATGTCCAAACGAGTTGATTTTT 58.961 30.769 5.36 0.00 39.87 1.94
3340 3909 6.826893 AATGTCCAAACGAGTTGATTTTTG 57.173 33.333 5.36 0.00 39.87 2.44
3341 3910 4.109050 TGTCCAAACGAGTTGATTTTTGC 58.891 39.130 5.36 0.00 39.87 3.68
3342 3911 4.109050 GTCCAAACGAGTTGATTTTTGCA 58.891 39.130 5.36 0.00 39.87 4.08
3343 3912 4.207019 GTCCAAACGAGTTGATTTTTGCAG 59.793 41.667 5.36 0.00 39.87 4.41
3344 3913 3.060339 CCAAACGAGTTGATTTTTGCAGC 60.060 43.478 5.36 0.00 39.87 5.25
3345 3914 2.036556 ACGAGTTGATTTTTGCAGCG 57.963 45.000 0.00 0.00 0.00 5.18
3346 3915 0.704551 CGAGTTGATTTTTGCAGCGC 59.295 50.000 0.00 0.00 0.00 5.92
3347 3916 1.769733 GAGTTGATTTTTGCAGCGCA 58.230 45.000 11.47 0.00 36.47 6.09
3348 3917 1.453148 GAGTTGATTTTTGCAGCGCAC 59.547 47.619 11.47 0.68 38.71 5.34
3349 3918 0.508213 GTTGATTTTTGCAGCGCACC 59.492 50.000 11.47 0.00 38.71 5.01
3350 3919 0.388659 TTGATTTTTGCAGCGCACCT 59.611 45.000 11.47 0.00 38.71 4.00
3351 3920 0.039256 TGATTTTTGCAGCGCACCTC 60.039 50.000 11.47 0.00 38.71 3.85
3352 3921 0.039256 GATTTTTGCAGCGCACCTCA 60.039 50.000 11.47 0.00 38.71 3.86
3353 3922 0.318955 ATTTTTGCAGCGCACCTCAC 60.319 50.000 11.47 0.00 38.71 3.51
3354 3923 2.660553 TTTTTGCAGCGCACCTCACG 62.661 55.000 11.47 0.00 38.71 4.35
3361 3930 2.048597 CGCACCTCACGCACCTAA 60.049 61.111 0.00 0.00 0.00 2.69
3362 3931 1.447838 CGCACCTCACGCACCTAAT 60.448 57.895 0.00 0.00 0.00 1.73
3363 3932 1.019278 CGCACCTCACGCACCTAATT 61.019 55.000 0.00 0.00 0.00 1.40
3364 3933 1.737696 CGCACCTCACGCACCTAATTA 60.738 52.381 0.00 0.00 0.00 1.40
3365 3934 2.561569 GCACCTCACGCACCTAATTAT 58.438 47.619 0.00 0.00 0.00 1.28
3366 3935 2.544267 GCACCTCACGCACCTAATTATC 59.456 50.000 0.00 0.00 0.00 1.75
3367 3936 3.741388 GCACCTCACGCACCTAATTATCT 60.741 47.826 0.00 0.00 0.00 1.98
3368 3937 4.500887 GCACCTCACGCACCTAATTATCTA 60.501 45.833 0.00 0.00 0.00 1.98
3369 3938 4.982916 CACCTCACGCACCTAATTATCTAC 59.017 45.833 0.00 0.00 0.00 2.59
3370 3939 4.038883 ACCTCACGCACCTAATTATCTACC 59.961 45.833 0.00 0.00 0.00 3.18
3371 3940 4.038763 CCTCACGCACCTAATTATCTACCA 59.961 45.833 0.00 0.00 0.00 3.25
3372 3941 4.940463 TCACGCACCTAATTATCTACCAC 58.060 43.478 0.00 0.00 0.00 4.16
3373 3942 4.056050 CACGCACCTAATTATCTACCACC 58.944 47.826 0.00 0.00 0.00 4.61
3374 3943 3.070590 ACGCACCTAATTATCTACCACCC 59.929 47.826 0.00 0.00 0.00 4.61
3375 3944 3.660865 GCACCTAATTATCTACCACCCG 58.339 50.000 0.00 0.00 0.00 5.28
3376 3945 3.322828 GCACCTAATTATCTACCACCCGA 59.677 47.826 0.00 0.00 0.00 5.14
3377 3946 4.202284 GCACCTAATTATCTACCACCCGAA 60.202 45.833 0.00 0.00 0.00 4.30
3378 3947 5.512576 GCACCTAATTATCTACCACCCGAAT 60.513 44.000 0.00 0.00 0.00 3.34
3379 3948 6.531021 CACCTAATTATCTACCACCCGAATT 58.469 40.000 0.00 0.00 0.00 2.17
3380 3949 6.996282 CACCTAATTATCTACCACCCGAATTT 59.004 38.462 0.00 0.00 0.00 1.82
3381 3950 7.501225 CACCTAATTATCTACCACCCGAATTTT 59.499 37.037 0.00 0.00 0.00 1.82
3382 3951 8.057011 ACCTAATTATCTACCACCCGAATTTTT 58.943 33.333 0.00 0.00 0.00 1.94
3446 4015 4.819761 GAGCGCGGGTGCAGATGA 62.820 66.667 8.83 0.00 42.97 2.92
3447 4016 4.827087 AGCGCGGGTGCAGATGAG 62.827 66.667 8.83 0.00 42.97 2.90
3452 4021 4.864334 GGGTGCAGATGAGCCCGG 62.864 72.222 0.00 0.00 0.00 5.73
3453 4022 4.864334 GGTGCAGATGAGCCCGGG 62.864 72.222 19.09 19.09 0.00 5.73
3454 4023 3.785859 GTGCAGATGAGCCCGGGA 61.786 66.667 29.31 2.74 0.00 5.14
3455 4024 3.473647 TGCAGATGAGCCCGGGAG 61.474 66.667 29.31 0.00 0.00 4.30
3456 4025 4.925861 GCAGATGAGCCCGGGAGC 62.926 72.222 29.31 16.09 0.00 4.70
3457 4026 4.247380 CAGATGAGCCCGGGAGCC 62.247 72.222 29.31 12.80 0.00 4.70
3458 4027 4.804420 AGATGAGCCCGGGAGCCA 62.804 66.667 29.31 18.65 0.00 4.75
3459 4028 3.797353 GATGAGCCCGGGAGCCAA 61.797 66.667 29.31 4.14 0.00 4.52
3460 4029 3.338250 ATGAGCCCGGGAGCCAAA 61.338 61.111 29.31 2.41 0.00 3.28
3461 4030 2.631012 GATGAGCCCGGGAGCCAAAT 62.631 60.000 29.31 8.04 0.00 2.32
3462 4031 2.517166 GAGCCCGGGAGCCAAATC 60.517 66.667 29.31 2.84 0.00 2.17
3463 4032 4.489771 AGCCCGGGAGCCAAATCG 62.490 66.667 29.31 0.00 0.00 3.34
3469 4038 4.179579 GGAGCCAAATCGCCGCAC 62.180 66.667 0.00 0.00 0.00 5.34
3470 4039 3.127533 GAGCCAAATCGCCGCACT 61.128 61.111 0.00 0.00 0.00 4.40
3471 4040 3.100862 GAGCCAAATCGCCGCACTC 62.101 63.158 0.00 0.00 0.00 3.51
3472 4041 3.127533 GCCAAATCGCCGCACTCT 61.128 61.111 0.00 0.00 0.00 3.24
3473 4042 3.093278 CCAAATCGCCGCACTCTC 58.907 61.111 0.00 0.00 0.00 3.20
3474 4043 1.741401 CCAAATCGCCGCACTCTCA 60.741 57.895 0.00 0.00 0.00 3.27
3475 4044 1.091771 CCAAATCGCCGCACTCTCAT 61.092 55.000 0.00 0.00 0.00 2.90
3476 4045 0.729116 CAAATCGCCGCACTCTCATT 59.271 50.000 0.00 0.00 0.00 2.57
3477 4046 1.131126 CAAATCGCCGCACTCTCATTT 59.869 47.619 0.00 0.00 0.00 2.32
3478 4047 1.453155 AATCGCCGCACTCTCATTTT 58.547 45.000 0.00 0.00 0.00 1.82
3479 4048 2.309528 ATCGCCGCACTCTCATTTTA 57.690 45.000 0.00 0.00 0.00 1.52
3480 4049 1.355971 TCGCCGCACTCTCATTTTAC 58.644 50.000 0.00 0.00 0.00 2.01
3481 4050 0.373716 CGCCGCACTCTCATTTTACC 59.626 55.000 0.00 0.00 0.00 2.85
3482 4051 1.448985 GCCGCACTCTCATTTTACCA 58.551 50.000 0.00 0.00 0.00 3.25
3483 4052 2.017049 GCCGCACTCTCATTTTACCAT 58.983 47.619 0.00 0.00 0.00 3.55
3484 4053 3.202906 GCCGCACTCTCATTTTACCATA 58.797 45.455 0.00 0.00 0.00 2.74
3485 4054 3.248602 GCCGCACTCTCATTTTACCATAG 59.751 47.826 0.00 0.00 0.00 2.23
3486 4055 4.693283 CCGCACTCTCATTTTACCATAGA 58.307 43.478 0.00 0.00 0.00 1.98
3487 4056 5.300752 CCGCACTCTCATTTTACCATAGAT 58.699 41.667 0.00 0.00 0.00 1.98
3488 4057 5.406780 CCGCACTCTCATTTTACCATAGATC 59.593 44.000 0.00 0.00 0.00 2.75
3489 4058 5.117745 CGCACTCTCATTTTACCATAGATCG 59.882 44.000 0.00 0.00 0.00 3.69
3490 4059 5.986135 GCACTCTCATTTTACCATAGATCGT 59.014 40.000 0.00 0.00 0.00 3.73
3491 4060 6.074088 GCACTCTCATTTTACCATAGATCGTG 60.074 42.308 0.00 0.00 0.00 4.35
3492 4061 6.980978 CACTCTCATTTTACCATAGATCGTGT 59.019 38.462 0.00 0.00 0.00 4.49
3493 4062 8.135529 CACTCTCATTTTACCATAGATCGTGTA 58.864 37.037 0.00 0.00 0.00 2.90
3494 4063 8.353684 ACTCTCATTTTACCATAGATCGTGTAG 58.646 37.037 0.00 0.00 0.00 2.74
3495 4064 8.459911 TCTCATTTTACCATAGATCGTGTAGA 57.540 34.615 0.00 0.00 0.00 2.59
3496 4065 8.350722 TCTCATTTTACCATAGATCGTGTAGAC 58.649 37.037 0.00 0.00 0.00 2.59
3497 4066 8.234136 TCATTTTACCATAGATCGTGTAGACT 57.766 34.615 0.00 0.00 0.00 3.24
3498 4067 8.135529 TCATTTTACCATAGATCGTGTAGACTG 58.864 37.037 0.00 0.00 0.00 3.51
3499 4068 7.400599 TTTTACCATAGATCGTGTAGACTGT 57.599 36.000 0.00 0.00 0.00 3.55
3500 4069 8.510243 TTTTACCATAGATCGTGTAGACTGTA 57.490 34.615 0.00 0.00 0.00 2.74
3501 4070 7.725818 TTACCATAGATCGTGTAGACTGTAG 57.274 40.000 0.00 0.00 0.00 2.74
3502 4071 5.926663 ACCATAGATCGTGTAGACTGTAGA 58.073 41.667 0.00 0.00 0.00 2.59
3503 4072 5.992829 ACCATAGATCGTGTAGACTGTAGAG 59.007 44.000 0.00 0.00 0.00 2.43
3504 4073 5.992829 CCATAGATCGTGTAGACTGTAGAGT 59.007 44.000 0.00 0.00 33.98 3.24
3505 4074 7.153315 CCATAGATCGTGTAGACTGTAGAGTA 58.847 42.308 0.00 0.00 30.16 2.59
3506 4075 7.329962 CCATAGATCGTGTAGACTGTAGAGTAG 59.670 44.444 0.00 0.00 30.16 2.57
3507 4076 6.224665 AGATCGTGTAGACTGTAGAGTAGT 57.775 41.667 0.00 0.00 30.16 2.73
3508 4077 6.044046 AGATCGTGTAGACTGTAGAGTAGTG 58.956 44.000 0.00 0.00 30.16 2.74
3509 4078 5.144692 TCGTGTAGACTGTAGAGTAGTGT 57.855 43.478 0.00 0.00 30.16 3.55
3510 4079 6.272822 TCGTGTAGACTGTAGAGTAGTGTA 57.727 41.667 0.00 0.00 30.16 2.90
3511 4080 6.328714 TCGTGTAGACTGTAGAGTAGTGTAG 58.671 44.000 0.00 0.00 30.16 2.74
3512 4081 6.071672 TCGTGTAGACTGTAGAGTAGTGTAGT 60.072 42.308 0.00 0.00 30.16 2.73
3513 4082 6.589523 CGTGTAGACTGTAGAGTAGTGTAGTT 59.410 42.308 0.00 0.00 30.16 2.24
3514 4083 7.117523 CGTGTAGACTGTAGAGTAGTGTAGTTT 59.882 40.741 0.00 0.00 30.16 2.66
3515 4084 8.782144 GTGTAGACTGTAGAGTAGTGTAGTTTT 58.218 37.037 0.00 0.00 30.16 2.43
3516 4085 9.347240 TGTAGACTGTAGAGTAGTGTAGTTTTT 57.653 33.333 0.00 0.00 30.16 1.94
3531 4100 2.903404 TTTTTCTTTGCGGGGGTGT 58.097 47.368 0.00 0.00 0.00 4.16
3532 4101 2.068834 TTTTTCTTTGCGGGGGTGTA 57.931 45.000 0.00 0.00 0.00 2.90
3533 4102 1.611519 TTTTCTTTGCGGGGGTGTAG 58.388 50.000 0.00 0.00 0.00 2.74
3534 4103 0.766131 TTTCTTTGCGGGGGTGTAGA 59.234 50.000 0.00 0.00 0.00 2.59
3535 4104 0.323629 TTCTTTGCGGGGGTGTAGAG 59.676 55.000 0.00 0.00 0.00 2.43
3536 4105 0.834687 TCTTTGCGGGGGTGTAGAGT 60.835 55.000 0.00 0.00 0.00 3.24
3537 4106 0.899720 CTTTGCGGGGGTGTAGAGTA 59.100 55.000 0.00 0.00 0.00 2.59
3538 4107 0.899720 TTTGCGGGGGTGTAGAGTAG 59.100 55.000 0.00 0.00 0.00 2.57
3539 4108 0.251922 TTGCGGGGGTGTAGAGTAGT 60.252 55.000 0.00 0.00 0.00 2.73
3540 4109 0.968901 TGCGGGGGTGTAGAGTAGTG 60.969 60.000 0.00 0.00 0.00 2.74
3541 4110 0.969409 GCGGGGGTGTAGAGTAGTGT 60.969 60.000 0.00 0.00 0.00 3.55
3542 4111 1.683011 GCGGGGGTGTAGAGTAGTGTA 60.683 57.143 0.00 0.00 0.00 2.90
3543 4112 2.295885 CGGGGGTGTAGAGTAGTGTAG 58.704 57.143 0.00 0.00 0.00 2.74
3544 4113 2.356535 CGGGGGTGTAGAGTAGTGTAGT 60.357 54.545 0.00 0.00 0.00 2.73
3545 4114 3.706183 GGGGGTGTAGAGTAGTGTAGTT 58.294 50.000 0.00 0.00 0.00 2.24
3546 4115 4.092279 GGGGGTGTAGAGTAGTGTAGTTT 58.908 47.826 0.00 0.00 0.00 2.66
3547 4116 4.529769 GGGGGTGTAGAGTAGTGTAGTTTT 59.470 45.833 0.00 0.00 0.00 2.43
3548 4117 5.012458 GGGGGTGTAGAGTAGTGTAGTTTTT 59.988 44.000 0.00 0.00 0.00 1.94
3714 4286 7.384115 GCCTTTGTATGTACGTACATCACATAT 59.616 37.037 37.31 20.01 45.11 1.78
3802 4374 0.033090 GGGGGCACTGTACGCTATAC 59.967 60.000 0.00 0.00 0.00 1.47
3934 4506 0.896479 TCGGTCGTTGATGGTGAGGA 60.896 55.000 0.00 0.00 0.00 3.71
3947 4519 3.607661 GAGGAGGGTCGCCGGATC 61.608 72.222 5.05 0.00 0.00 3.36
3950 4522 4.222847 GAGGGTCGCCGGATCCAC 62.223 72.222 13.41 1.56 46.68 4.02
3975 4547 1.538512 GTGGACCGTTTTTAGGCCTTC 59.461 52.381 12.58 0.00 0.00 3.46
3976 4548 1.143277 TGGACCGTTTTTAGGCCTTCA 59.857 47.619 12.58 0.00 0.00 3.02
3986 4558 6.629739 CGTTTTTAGGCCTTCATAGTCTAGGT 60.630 42.308 12.58 0.00 0.00 3.08
3988 4560 5.871396 TTAGGCCTTCATAGTCTAGGTTG 57.129 43.478 12.58 0.00 0.00 3.77
3994 4566 5.602628 CCTTCATAGTCTAGGTTGTTAGGC 58.397 45.833 0.00 0.00 0.00 3.93
4000 4572 3.901844 AGTCTAGGTTGTTAGGCTGTTCA 59.098 43.478 0.00 0.00 34.44 3.18
4009 4581 0.824109 TAGGCTGTTCATCGTCCTGG 59.176 55.000 0.00 0.00 0.00 4.45
4046 4618 5.898606 CGATGACAACGCTGAATAAAGATTC 59.101 40.000 0.00 0.00 41.72 2.52
4058 4630 8.901793 GCTGAATAAAGATTCTTCAGATCCTTT 58.098 33.333 17.33 0.00 45.57 3.11
4062 4634 4.414337 AGATTCTTCAGATCCTTTCCCG 57.586 45.455 0.00 0.00 0.00 5.14
4063 4635 4.033709 AGATTCTTCAGATCCTTTCCCGA 58.966 43.478 0.00 0.00 0.00 5.14
4064 4636 4.657969 AGATTCTTCAGATCCTTTCCCGAT 59.342 41.667 0.00 0.00 0.00 4.18
4065 4637 3.827008 TCTTCAGATCCTTTCCCGATG 57.173 47.619 0.00 0.00 0.00 3.84
4104 4677 4.045334 TGGTTGGGGATGGATTTAGAAACT 59.955 41.667 0.00 0.00 0.00 2.66
4105 4678 5.254267 TGGTTGGGGATGGATTTAGAAACTA 59.746 40.000 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 68 4.657814 TTGCTTCCAAGAACCTCCTTAT 57.342 40.909 0.00 0.00 0.00 1.73
388 394 4.889409 GCCTTCACTTCAATCCAATCCATA 59.111 41.667 0.00 0.00 0.00 2.74
460 497 0.183492 AGTGAGGCAACATGTGGTGT 59.817 50.000 0.00 0.00 44.84 4.16
637 692 3.165071 CCAACCAGGACCAATAAGCTTT 58.835 45.455 3.20 0.00 41.22 3.51
757 812 3.577415 GGATCGTTACTAATGCCCTAGGT 59.423 47.826 8.29 0.00 0.00 3.08
777 832 2.553464 TGGAGAACCGGGATTAAAGGA 58.447 47.619 6.32 0.00 39.42 3.36
794 849 2.297895 CCCATCTGTCCCGGTTGGA 61.298 63.158 0.00 0.00 42.41 3.53
850 905 2.076100 TCCATGCTCACTTAACTTGCG 58.924 47.619 0.00 0.00 0.00 4.85
896 951 4.415596 AGAGAAAGAGAGAGAAGGCTGAA 58.584 43.478 0.00 0.00 0.00 3.02
913 980 3.692101 GTGTGAATCGGAGAGAGAGAGAA 59.308 47.826 0.00 0.00 43.63 2.87
943 1010 3.168292 ACAACCGTACTATATAGGGCCC 58.832 50.000 16.46 16.46 0.00 5.80
970 1041 9.216117 GAACTCTAAGCTGGAACACTATTTTTA 57.784 33.333 0.00 0.00 0.00 1.52
1091 1181 1.369625 GATCCCAAGCTTGTGGTACG 58.630 55.000 24.35 8.31 36.90 3.67
1098 1188 2.099141 TCAACTCGATCCCAAGCTTG 57.901 50.000 19.93 19.93 0.00 4.01
1142 1264 4.738124 TCATGCTTTATCGATCGATCTCC 58.262 43.478 32.50 19.17 36.17 3.71
1304 1426 9.399797 GAGAGATCTACATCATGTATCTGAGAT 57.600 37.037 7.66 4.04 28.74 2.75
1421 1618 3.150848 TGAACAGATTGATCGTCCGAG 57.849 47.619 0.00 0.00 0.00 4.63
1528 1867 6.238456 CGTCCTTGAGCAGCAAATAATTCATA 60.238 38.462 0.00 0.00 35.74 2.15
1557 1896 7.887996 AAACATCGTTTGCACAATTAATGAT 57.112 28.000 0.00 0.00 0.00 2.45
1559 1898 8.483218 TGTTAAACATCGTTTGCACAATTAATG 58.517 29.630 2.42 0.00 0.00 1.90
1732 2102 3.431233 AGCTAACATGATTGATCGATGCG 59.569 43.478 0.54 0.00 0.00 4.73
1778 2205 3.120854 GCGTGAAGAAAGAGTTGCTACTG 60.121 47.826 5.27 0.00 33.84 2.74
1787 2214 2.153913 CGTGGGCGTGAAGAAAGAG 58.846 57.895 0.00 0.00 0.00 2.85
1800 2227 3.379445 AGACCAGCCGTACGTGGG 61.379 66.667 23.96 18.84 38.25 4.61
1801 2228 2.126071 CAGACCAGCCGTACGTGG 60.126 66.667 20.06 20.06 39.98 4.94
1828 2262 6.857451 CAGACGATTCAGATATGTGAAGAGAG 59.143 42.308 18.90 12.42 39.78 3.20
1950 2386 1.064803 CGTTGCTGTTGGTGTTGCTAA 59.935 47.619 0.00 0.00 0.00 3.09
2068 2516 3.179830 GCAAGAAGAAGCGTCGATTCTA 58.820 45.455 24.61 0.00 37.30 2.10
2133 2587 1.067915 CAGCCATTTTTGGTACCCACG 60.068 52.381 10.07 0.00 30.78 4.94
2137 2591 4.736126 ATTAGCAGCCATTTTTGGTACC 57.264 40.909 4.43 4.43 0.00 3.34
2162 2621 8.073768 CGAACACACCAATTACAGTTAAAGAAT 58.926 33.333 0.00 0.00 0.00 2.40
2239 2745 0.249398 CTGAAAACCCCCTCGATCGT 59.751 55.000 15.94 0.00 0.00 3.73
2249 2755 0.322906 CTCCCAGCTCCTGAAAACCC 60.323 60.000 0.00 0.00 32.44 4.11
2327 2833 7.099120 AGACAAAAAGAAACACTTCATTGCTT 58.901 30.769 0.00 0.00 38.11 3.91
2475 3007 3.904136 ACGTTTGATGGAAAGCAAGAG 57.096 42.857 0.00 0.00 0.00 2.85
2576 3123 1.481363 GGTGGTAGTTAGGCAGAGTCC 59.519 57.143 0.00 0.00 0.00 3.85
2632 3183 6.478344 GCTGATATTACAACAGAACTGGAGAG 59.522 42.308 6.76 0.00 34.07 3.20
2710 3262 4.273257 TCAGCGTGACGTGCCGAA 62.273 61.111 6.91 0.00 0.00 4.30
2739 3291 3.393472 GGCTGCCGATTCTTCTGAT 57.607 52.632 1.35 0.00 0.00 2.90
2818 3373 4.280494 ACGTCGGTGTCGCTGCTT 62.280 61.111 0.00 0.00 36.13 3.91
2828 3383 2.038837 TCATGCTCGAGACGTCGGT 61.039 57.895 18.75 0.00 46.80 4.69
2894 3449 3.755628 GTCTGAGCGGCGGTGGTA 61.756 66.667 19.47 1.21 0.00 3.25
3054 3623 5.239525 GCTCTGCCTTGAATTATCGGTAAAT 59.760 40.000 0.00 0.00 0.00 1.40
3078 3647 4.864334 GGTGCATCTGAGCCCGGG 62.864 72.222 19.09 19.09 0.00 5.73
3079 3648 3.790437 AGGTGCATCTGAGCCCGG 61.790 66.667 0.00 0.00 32.32 5.73
3080 3649 2.513204 CAGGTGCATCTGAGCCCG 60.513 66.667 23.04 0.00 36.93 6.13
3081 3650 1.001641 AACAGGTGCATCTGAGCCC 60.002 57.895 33.21 6.56 38.11 5.19
3082 3651 0.321919 TGAACAGGTGCATCTGAGCC 60.322 55.000 33.21 19.72 38.11 4.70
3083 3652 1.085091 CTGAACAGGTGCATCTGAGC 58.915 55.000 33.21 22.39 38.11 4.26
3084 3653 1.085091 GCTGAACAGGTGCATCTGAG 58.915 55.000 33.21 20.41 38.11 3.35
3085 3654 0.397564 TGCTGAACAGGTGCATCTGA 59.602 50.000 33.21 10.40 38.11 3.27
3086 3655 1.241165 TTGCTGAACAGGTGCATCTG 58.759 50.000 25.51 25.51 40.40 2.90
3087 3656 1.985473 TTTGCTGAACAGGTGCATCT 58.015 45.000 0.00 0.00 36.55 2.90
3088 3657 2.798976 TTTTGCTGAACAGGTGCATC 57.201 45.000 3.99 0.00 36.55 3.91
3148 3717 8.909923 CCTAATTATCTACCACCCGAAATTTTT 58.090 33.333 0.00 0.00 0.00 1.94
3149 3718 8.057011 ACCTAATTATCTACCACCCGAAATTTT 58.943 33.333 0.00 0.00 0.00 1.82
3150 3719 7.501225 CACCTAATTATCTACCACCCGAAATTT 59.499 37.037 0.00 0.00 0.00 1.82
3151 3720 6.996282 CACCTAATTATCTACCACCCGAAATT 59.004 38.462 0.00 0.00 0.00 1.82
3152 3721 6.531021 CACCTAATTATCTACCACCCGAAAT 58.469 40.000 0.00 0.00 0.00 2.17
3153 3722 5.685599 GCACCTAATTATCTACCACCCGAAA 60.686 44.000 0.00 0.00 0.00 3.46
3154 3723 4.202284 GCACCTAATTATCTACCACCCGAA 60.202 45.833 0.00 0.00 0.00 4.30
3155 3724 3.322828 GCACCTAATTATCTACCACCCGA 59.677 47.826 0.00 0.00 0.00 5.14
3156 3725 3.660865 GCACCTAATTATCTACCACCCG 58.339 50.000 0.00 0.00 0.00 5.28
3157 3726 3.070590 ACGCACCTAATTATCTACCACCC 59.929 47.826 0.00 0.00 0.00 4.61
3158 3727 4.056050 CACGCACCTAATTATCTACCACC 58.944 47.826 0.00 0.00 0.00 4.61
3159 3728 4.940463 TCACGCACCTAATTATCTACCAC 58.060 43.478 0.00 0.00 0.00 4.16
3160 3729 4.038763 CCTCACGCACCTAATTATCTACCA 59.961 45.833 0.00 0.00 0.00 3.25
3161 3730 4.038883 ACCTCACGCACCTAATTATCTACC 59.961 45.833 0.00 0.00 0.00 3.18
3162 3731 4.982916 CACCTCACGCACCTAATTATCTAC 59.017 45.833 0.00 0.00 0.00 2.59
3163 3732 4.500887 GCACCTCACGCACCTAATTATCTA 60.501 45.833 0.00 0.00 0.00 1.98
3164 3733 3.741388 GCACCTCACGCACCTAATTATCT 60.741 47.826 0.00 0.00 0.00 1.98
3165 3734 2.544267 GCACCTCACGCACCTAATTATC 59.456 50.000 0.00 0.00 0.00 1.75
3166 3735 2.561569 GCACCTCACGCACCTAATTAT 58.438 47.619 0.00 0.00 0.00 1.28
3167 3736 1.737696 CGCACCTCACGCACCTAATTA 60.738 52.381 0.00 0.00 0.00 1.40
3168 3737 1.019278 CGCACCTCACGCACCTAATT 61.019 55.000 0.00 0.00 0.00 1.40
3169 3738 1.447838 CGCACCTCACGCACCTAAT 60.448 57.895 0.00 0.00 0.00 1.73
3170 3739 2.048597 CGCACCTCACGCACCTAA 60.049 61.111 0.00 0.00 0.00 2.69
3177 3746 2.660553 TTTTTGCAGCGCACCTCACG 62.661 55.000 11.47 0.00 38.71 4.35
3178 3747 0.318955 ATTTTTGCAGCGCACCTCAC 60.319 50.000 11.47 0.00 38.71 3.51
3179 3748 0.039256 GATTTTTGCAGCGCACCTCA 60.039 50.000 11.47 0.00 38.71 3.86
3180 3749 0.039256 TGATTTTTGCAGCGCACCTC 60.039 50.000 11.47 0.00 38.71 3.85
3181 3750 0.388659 TTGATTTTTGCAGCGCACCT 59.611 45.000 11.47 0.00 38.71 4.00
3182 3751 0.508213 GTTGATTTTTGCAGCGCACC 59.492 50.000 11.47 0.00 38.71 5.01
3183 3752 1.453148 GAGTTGATTTTTGCAGCGCAC 59.547 47.619 11.47 0.68 38.71 5.34
3184 3753 1.769733 GAGTTGATTTTTGCAGCGCA 58.230 45.000 11.47 0.00 36.47 6.09
3185 3754 0.704551 CGAGTTGATTTTTGCAGCGC 59.295 50.000 0.00 0.00 0.00 5.92
3186 3755 2.036556 ACGAGTTGATTTTTGCAGCG 57.963 45.000 0.00 0.00 0.00 5.18
3187 3756 3.060339 CCAAACGAGTTGATTTTTGCAGC 60.060 43.478 5.36 0.00 39.87 5.25
3188 3757 4.207019 GTCCAAACGAGTTGATTTTTGCAG 59.793 41.667 5.36 0.00 39.87 4.41
3189 3758 4.109050 GTCCAAACGAGTTGATTTTTGCA 58.891 39.130 5.36 0.00 39.87 4.08
3190 3759 4.109050 TGTCCAAACGAGTTGATTTTTGC 58.891 39.130 5.36 0.00 39.87 3.68
3191 3760 6.826893 AATGTCCAAACGAGTTGATTTTTG 57.173 33.333 5.36 0.00 39.87 2.44
3192 3761 7.038659 TCAAATGTCCAAACGAGTTGATTTTT 58.961 30.769 5.36 0.00 39.87 1.94
3193 3762 6.568869 TCAAATGTCCAAACGAGTTGATTTT 58.431 32.000 5.36 0.00 39.87 1.82
3194 3763 6.142818 TCAAATGTCCAAACGAGTTGATTT 57.857 33.333 5.36 2.14 39.87 2.17
3195 3764 5.762045 CTCAAATGTCCAAACGAGTTGATT 58.238 37.500 5.36 0.00 39.87 2.57
3196 3765 4.320494 GCTCAAATGTCCAAACGAGTTGAT 60.320 41.667 5.36 0.00 39.87 2.57
3197 3766 3.003275 GCTCAAATGTCCAAACGAGTTGA 59.997 43.478 5.36 0.00 39.87 3.18
3198 3767 3.243035 TGCTCAAATGTCCAAACGAGTTG 60.243 43.478 0.00 0.00 36.94 3.16
3199 3768 2.948979 TGCTCAAATGTCCAAACGAGTT 59.051 40.909 0.00 0.00 0.00 3.01
3200 3769 2.571212 TGCTCAAATGTCCAAACGAGT 58.429 42.857 0.00 0.00 0.00 4.18
3201 3770 3.003689 ACTTGCTCAAATGTCCAAACGAG 59.996 43.478 0.00 0.00 0.00 4.18
3202 3771 2.948979 ACTTGCTCAAATGTCCAAACGA 59.051 40.909 0.00 0.00 0.00 3.85
3203 3772 3.003689 AGACTTGCTCAAATGTCCAAACG 59.996 43.478 0.00 0.00 0.00 3.60
3204 3773 4.202050 ACAGACTTGCTCAAATGTCCAAAC 60.202 41.667 0.00 0.00 0.00 2.93
3205 3774 3.953612 ACAGACTTGCTCAAATGTCCAAA 59.046 39.130 0.00 0.00 0.00 3.28
3206 3775 3.316029 CACAGACTTGCTCAAATGTCCAA 59.684 43.478 0.00 0.00 0.00 3.53
3207 3776 2.880268 CACAGACTTGCTCAAATGTCCA 59.120 45.455 0.00 0.00 0.00 4.02
3208 3777 2.351157 GCACAGACTTGCTCAAATGTCC 60.351 50.000 0.00 0.00 39.59 4.02
3209 3778 2.291465 TGCACAGACTTGCTCAAATGTC 59.709 45.455 9.86 0.00 43.41 3.06
3210 3779 2.300433 TGCACAGACTTGCTCAAATGT 58.700 42.857 9.86 0.00 43.41 2.71
3211 3780 3.358707 TTGCACAGACTTGCTCAAATG 57.641 42.857 9.86 0.00 43.41 2.32
3212 3781 4.389890 TTTTGCACAGACTTGCTCAAAT 57.610 36.364 9.86 0.00 43.41 2.32
3213 3782 3.865011 TTTTGCACAGACTTGCTCAAA 57.135 38.095 9.86 7.06 43.41 2.69
3214 3783 3.865011 TTTTTGCACAGACTTGCTCAA 57.135 38.095 9.86 2.78 43.41 3.02
3231 3800 7.264947 ACTGTTTTGATCCGATTTGTCTTTTT 58.735 30.769 0.00 0.00 0.00 1.94
3232 3801 6.805713 ACTGTTTTGATCCGATTTGTCTTTT 58.194 32.000 0.00 0.00 0.00 2.27
3233 3802 6.391227 ACTGTTTTGATCCGATTTGTCTTT 57.609 33.333 0.00 0.00 0.00 2.52
3234 3803 6.391227 AACTGTTTTGATCCGATTTGTCTT 57.609 33.333 0.00 0.00 0.00 3.01
3235 3804 6.183360 ACAAACTGTTTTGATCCGATTTGTCT 60.183 34.615 2.41 0.00 44.38 3.41
3236 3805 5.977129 ACAAACTGTTTTGATCCGATTTGTC 59.023 36.000 2.41 0.00 44.38 3.18
3237 3806 5.748152 CACAAACTGTTTTGATCCGATTTGT 59.252 36.000 2.41 0.00 44.38 2.83
3238 3807 5.976534 TCACAAACTGTTTTGATCCGATTTG 59.023 36.000 2.41 0.00 44.38 2.32
3239 3808 6.142818 TCACAAACTGTTTTGATCCGATTT 57.857 33.333 2.41 0.00 44.38 2.17
3240 3809 5.766150 TCACAAACTGTTTTGATCCGATT 57.234 34.783 2.41 0.00 44.38 3.34
3241 3810 5.067153 TGTTCACAAACTGTTTTGATCCGAT 59.933 36.000 2.41 0.00 44.38 4.18
3242 3811 4.396478 TGTTCACAAACTGTTTTGATCCGA 59.604 37.500 2.41 0.00 44.38 4.55
3243 3812 4.667262 TGTTCACAAACTGTTTTGATCCG 58.333 39.130 2.41 0.00 44.38 4.18
3244 3813 5.650543 ACTGTTCACAAACTGTTTTGATCC 58.349 37.500 2.41 6.07 44.38 3.36
3245 3814 8.583765 GTTTACTGTTCACAAACTGTTTTGATC 58.416 33.333 2.41 10.06 44.38 2.92
3246 3815 8.303876 AGTTTACTGTTCACAAACTGTTTTGAT 58.696 29.630 2.41 0.41 44.38 2.57
3247 3816 7.653647 AGTTTACTGTTCACAAACTGTTTTGA 58.346 30.769 2.41 8.24 44.38 2.69
3248 3817 7.867445 AGTTTACTGTTCACAAACTGTTTTG 57.133 32.000 2.41 6.15 42.77 2.44
3249 3818 8.880878 AAAGTTTACTGTTCACAAACTGTTTT 57.119 26.923 2.41 0.00 42.77 2.43
3250 3819 8.880878 AAAAGTTTACTGTTCACAAACTGTTT 57.119 26.923 7.08 0.00 42.77 2.83
3251 3820 8.880878 AAAAAGTTTACTGTTCACAAACTGTT 57.119 26.923 7.08 5.64 42.77 3.16
3252 3821 8.138712 TGAAAAAGTTTACTGTTCACAAACTGT 58.861 29.630 7.08 6.18 45.85 3.55
3253 3822 8.424731 GTGAAAAAGTTTACTGTTCACAAACTG 58.575 33.333 22.36 0.00 43.78 3.16
3254 3823 8.138712 TGTGAAAAAGTTTACTGTTCACAAACT 58.861 29.630 25.11 8.83 46.89 2.66
3255 3824 8.288217 TGTGAAAAAGTTTACTGTTCACAAAC 57.712 30.769 25.11 6.97 46.89 2.93
3259 3828 6.745907 GGTCTGTGAAAAAGTTTACTGTTCAC 59.254 38.462 21.39 21.39 44.16 3.18
3260 3829 6.127842 GGGTCTGTGAAAAAGTTTACTGTTCA 60.128 38.462 5.58 5.58 32.00 3.18
3261 3830 6.263344 GGGTCTGTGAAAAAGTTTACTGTTC 58.737 40.000 0.00 0.00 0.00 3.18
3262 3831 5.126545 GGGGTCTGTGAAAAAGTTTACTGTT 59.873 40.000 0.00 0.00 0.00 3.16
3263 3832 4.643334 GGGGTCTGTGAAAAAGTTTACTGT 59.357 41.667 0.00 0.00 0.00 3.55
3264 3833 4.261031 CGGGGTCTGTGAAAAAGTTTACTG 60.261 45.833 0.00 0.00 0.00 2.74
3265 3834 3.881089 CGGGGTCTGTGAAAAAGTTTACT 59.119 43.478 0.00 0.00 0.00 2.24
3266 3835 3.878699 TCGGGGTCTGTGAAAAAGTTTAC 59.121 43.478 0.00 0.00 0.00 2.01
3267 3836 4.153673 TCGGGGTCTGTGAAAAAGTTTA 57.846 40.909 0.00 0.00 0.00 2.01
3268 3837 3.007473 TCGGGGTCTGTGAAAAAGTTT 57.993 42.857 0.00 0.00 0.00 2.66
3269 3838 2.721425 TCGGGGTCTGTGAAAAAGTT 57.279 45.000 0.00 0.00 0.00 2.66
3270 3839 2.951229 ATCGGGGTCTGTGAAAAAGT 57.049 45.000 0.00 0.00 0.00 2.66
3271 3840 4.202111 ACAAAATCGGGGTCTGTGAAAAAG 60.202 41.667 0.00 0.00 0.00 2.27
3272 3841 3.702045 ACAAAATCGGGGTCTGTGAAAAA 59.298 39.130 0.00 0.00 0.00 1.94
3273 3842 3.292460 ACAAAATCGGGGTCTGTGAAAA 58.708 40.909 0.00 0.00 0.00 2.29
3274 3843 2.882137 GACAAAATCGGGGTCTGTGAAA 59.118 45.455 0.00 0.00 0.00 2.69
3275 3844 2.105821 AGACAAAATCGGGGTCTGTGAA 59.894 45.455 0.00 0.00 40.21 3.18
3276 3845 1.697432 AGACAAAATCGGGGTCTGTGA 59.303 47.619 0.00 0.00 40.21 3.58
3277 3846 2.185004 AGACAAAATCGGGGTCTGTG 57.815 50.000 0.00 0.00 40.21 3.66
3278 3847 2.951229 AAGACAAAATCGGGGTCTGT 57.049 45.000 0.00 0.00 40.80 3.41
3279 3848 4.584327 AAAAAGACAAAATCGGGGTCTG 57.416 40.909 0.00 0.00 40.80 3.51
3302 3871 2.351157 GGACATTTGAGCAAGTCTGTGC 60.351 50.000 0.00 0.00 45.28 4.57
3303 3872 2.880268 TGGACATTTGAGCAAGTCTGTG 59.120 45.455 0.00 0.00 0.00 3.66
3304 3873 3.213206 TGGACATTTGAGCAAGTCTGT 57.787 42.857 0.00 0.00 0.00 3.41
3305 3874 4.293415 GTTTGGACATTTGAGCAAGTCTG 58.707 43.478 0.00 0.00 0.00 3.51
3306 3875 3.003689 CGTTTGGACATTTGAGCAAGTCT 59.996 43.478 0.00 0.00 0.00 3.24
3307 3876 3.003275 TCGTTTGGACATTTGAGCAAGTC 59.997 43.478 0.00 0.00 0.00 3.01
3308 3877 2.948979 TCGTTTGGACATTTGAGCAAGT 59.051 40.909 0.00 0.00 0.00 3.16
3309 3878 3.003689 ACTCGTTTGGACATTTGAGCAAG 59.996 43.478 0.00 0.00 0.00 4.01
3310 3879 2.948979 ACTCGTTTGGACATTTGAGCAA 59.051 40.909 0.00 0.00 0.00 3.91
3311 3880 2.571212 ACTCGTTTGGACATTTGAGCA 58.429 42.857 0.00 0.00 0.00 4.26
3312 3881 3.003275 TCAACTCGTTTGGACATTTGAGC 59.997 43.478 0.69 0.00 35.69 4.26
3313 3882 4.811555 TCAACTCGTTTGGACATTTGAG 57.188 40.909 0.69 0.00 35.69 3.02
3314 3883 5.766150 AATCAACTCGTTTGGACATTTGA 57.234 34.783 0.69 0.00 35.69 2.69
3315 3884 6.826893 AAAATCAACTCGTTTGGACATTTG 57.173 33.333 0.69 0.00 35.69 2.32
3316 3885 6.238076 GCAAAAATCAACTCGTTTGGACATTT 60.238 34.615 0.00 0.00 35.69 2.32
3317 3886 5.234116 GCAAAAATCAACTCGTTTGGACATT 59.766 36.000 0.00 0.00 35.69 2.71
3318 3887 4.744631 GCAAAAATCAACTCGTTTGGACAT 59.255 37.500 0.00 0.00 35.69 3.06
3319 3888 4.109050 GCAAAAATCAACTCGTTTGGACA 58.891 39.130 0.00 0.00 35.69 4.02
3320 3889 4.109050 TGCAAAAATCAACTCGTTTGGAC 58.891 39.130 0.00 0.00 35.69 4.02
3321 3890 4.358851 CTGCAAAAATCAACTCGTTTGGA 58.641 39.130 0.00 0.00 35.69 3.53
3322 3891 3.060339 GCTGCAAAAATCAACTCGTTTGG 60.060 43.478 0.00 0.00 35.69 3.28
3323 3892 3.360956 CGCTGCAAAAATCAACTCGTTTG 60.361 43.478 0.00 0.00 36.42 2.93
3324 3893 2.788786 CGCTGCAAAAATCAACTCGTTT 59.211 40.909 0.00 0.00 0.00 3.60
3325 3894 2.384382 CGCTGCAAAAATCAACTCGTT 58.616 42.857 0.00 0.00 0.00 3.85
3326 3895 1.925946 GCGCTGCAAAAATCAACTCGT 60.926 47.619 0.00 0.00 0.00 4.18
3327 3896 0.704551 GCGCTGCAAAAATCAACTCG 59.295 50.000 0.00 0.00 0.00 4.18
3328 3897 1.453148 GTGCGCTGCAAAAATCAACTC 59.547 47.619 9.73 0.00 41.47 3.01
3329 3898 1.490621 GTGCGCTGCAAAAATCAACT 58.509 45.000 9.73 0.00 41.47 3.16
3330 3899 0.508213 GGTGCGCTGCAAAAATCAAC 59.492 50.000 9.73 0.00 41.47 3.18
3331 3900 0.388659 AGGTGCGCTGCAAAAATCAA 59.611 45.000 9.73 0.00 41.47 2.57
3332 3901 0.039256 GAGGTGCGCTGCAAAAATCA 60.039 50.000 9.73 0.00 41.47 2.57
3333 3902 0.039256 TGAGGTGCGCTGCAAAAATC 60.039 50.000 9.73 0.00 41.47 2.17
3334 3903 0.318955 GTGAGGTGCGCTGCAAAAAT 60.319 50.000 9.73 0.00 41.47 1.82
3335 3904 1.065600 GTGAGGTGCGCTGCAAAAA 59.934 52.632 9.73 0.00 41.47 1.94
3336 3905 2.721231 GTGAGGTGCGCTGCAAAA 59.279 55.556 9.73 0.00 41.47 2.44
3337 3906 3.648982 CGTGAGGTGCGCTGCAAA 61.649 61.111 9.73 0.00 41.47 3.68
3344 3913 1.019278 AATTAGGTGCGTGAGGTGCG 61.019 55.000 0.00 0.00 34.24 5.34
3345 3914 2.018542 TAATTAGGTGCGTGAGGTGC 57.981 50.000 0.00 0.00 0.00 5.01
3346 3915 4.060038 AGATAATTAGGTGCGTGAGGTG 57.940 45.455 0.00 0.00 0.00 4.00
3347 3916 4.038883 GGTAGATAATTAGGTGCGTGAGGT 59.961 45.833 0.00 0.00 0.00 3.85
3348 3917 4.038763 TGGTAGATAATTAGGTGCGTGAGG 59.961 45.833 0.00 0.00 0.00 3.86
3349 3918 4.982916 GTGGTAGATAATTAGGTGCGTGAG 59.017 45.833 0.00 0.00 0.00 3.51
3350 3919 4.202182 GGTGGTAGATAATTAGGTGCGTGA 60.202 45.833 0.00 0.00 0.00 4.35
3351 3920 4.056050 GGTGGTAGATAATTAGGTGCGTG 58.944 47.826 0.00 0.00 0.00 5.34
3352 3921 3.070590 GGGTGGTAGATAATTAGGTGCGT 59.929 47.826 0.00 0.00 0.00 5.24
3353 3922 3.660865 GGGTGGTAGATAATTAGGTGCG 58.339 50.000 0.00 0.00 0.00 5.34
3354 3923 3.322828 TCGGGTGGTAGATAATTAGGTGC 59.677 47.826 0.00 0.00 0.00 5.01
3355 3924 5.540400 TTCGGGTGGTAGATAATTAGGTG 57.460 43.478 0.00 0.00 0.00 4.00
3356 3925 6.758806 AATTCGGGTGGTAGATAATTAGGT 57.241 37.500 0.00 0.00 0.00 3.08
3357 3926 8.459911 AAAAATTCGGGTGGTAGATAATTAGG 57.540 34.615 0.00 0.00 0.00 2.69
3429 3998 4.819761 TCATCTGCACCCGCGCTC 62.820 66.667 5.56 0.00 42.97 5.03
3430 3999 4.827087 CTCATCTGCACCCGCGCT 62.827 66.667 5.56 0.00 42.97 5.92
3435 4004 4.864334 CCGGGCTCATCTGCACCC 62.864 72.222 0.00 0.00 39.12 4.61
3436 4005 4.864334 CCCGGGCTCATCTGCACC 62.864 72.222 8.08 0.00 31.60 5.01
3437 4006 3.746949 CTCCCGGGCTCATCTGCAC 62.747 68.421 18.49 0.00 34.04 4.57
3438 4007 3.473647 CTCCCGGGCTCATCTGCA 61.474 66.667 18.49 0.00 34.04 4.41
3439 4008 4.925861 GCTCCCGGGCTCATCTGC 62.926 72.222 18.49 7.22 0.00 4.26
3440 4009 4.247380 GGCTCCCGGGCTCATCTG 62.247 72.222 18.49 0.33 37.53 2.90
3441 4010 4.804420 TGGCTCCCGGGCTCATCT 62.804 66.667 18.49 0.00 41.48 2.90
3442 4011 2.631012 ATTTGGCTCCCGGGCTCATC 62.631 60.000 18.49 3.79 41.48 2.92
3443 4012 2.631012 GATTTGGCTCCCGGGCTCAT 62.631 60.000 18.49 0.87 41.48 2.90
3444 4013 3.338250 ATTTGGCTCCCGGGCTCA 61.338 61.111 18.49 11.07 41.48 4.26
3445 4014 2.517166 GATTTGGCTCCCGGGCTC 60.517 66.667 18.49 9.71 41.48 4.70
3446 4015 4.489771 CGATTTGGCTCCCGGGCT 62.490 66.667 18.49 0.00 41.48 5.19
3452 4021 4.179579 GTGCGGCGATTTGGCTCC 62.180 66.667 12.98 0.00 42.02 4.70
3453 4022 3.100862 GAGTGCGGCGATTTGGCTC 62.101 63.158 12.98 4.10 42.02 4.70
3454 4023 3.127533 GAGTGCGGCGATTTGGCT 61.128 61.111 12.98 0.00 42.02 4.75
3455 4024 3.100862 GAGAGTGCGGCGATTTGGC 62.101 63.158 12.98 0.00 40.44 4.52
3456 4025 1.091771 ATGAGAGTGCGGCGATTTGG 61.092 55.000 12.98 0.00 0.00 3.28
3457 4026 0.729116 AATGAGAGTGCGGCGATTTG 59.271 50.000 12.98 0.00 0.00 2.32
3458 4027 1.453155 AAATGAGAGTGCGGCGATTT 58.547 45.000 12.98 2.46 0.00 2.17
3459 4028 1.453155 AAAATGAGAGTGCGGCGATT 58.547 45.000 12.98 0.00 0.00 3.34
3460 4029 1.933853 GTAAAATGAGAGTGCGGCGAT 59.066 47.619 12.98 0.00 0.00 4.58
3461 4030 1.355971 GTAAAATGAGAGTGCGGCGA 58.644 50.000 12.98 0.00 0.00 5.54
3462 4031 0.373716 GGTAAAATGAGAGTGCGGCG 59.626 55.000 0.51 0.51 0.00 6.46
3463 4032 1.448985 TGGTAAAATGAGAGTGCGGC 58.551 50.000 0.00 0.00 0.00 6.53
3464 4033 4.693283 TCTATGGTAAAATGAGAGTGCGG 58.307 43.478 0.00 0.00 0.00 5.69
3465 4034 5.117745 CGATCTATGGTAAAATGAGAGTGCG 59.882 44.000 0.00 0.00 0.00 5.34
3466 4035 5.986135 ACGATCTATGGTAAAATGAGAGTGC 59.014 40.000 0.00 0.00 0.00 4.40
3467 4036 6.980978 ACACGATCTATGGTAAAATGAGAGTG 59.019 38.462 0.00 0.00 0.00 3.51
3468 4037 7.113658 ACACGATCTATGGTAAAATGAGAGT 57.886 36.000 0.00 0.00 0.00 3.24
3469 4038 8.568794 TCTACACGATCTATGGTAAAATGAGAG 58.431 37.037 0.00 0.00 0.00 3.20
3470 4039 8.350722 GTCTACACGATCTATGGTAAAATGAGA 58.649 37.037 0.00 0.00 0.00 3.27
3471 4040 8.353684 AGTCTACACGATCTATGGTAAAATGAG 58.646 37.037 0.00 0.00 0.00 2.90
3472 4041 8.135529 CAGTCTACACGATCTATGGTAAAATGA 58.864 37.037 0.00 0.00 0.00 2.57
3473 4042 7.921214 ACAGTCTACACGATCTATGGTAAAATG 59.079 37.037 0.00 0.00 0.00 2.32
3474 4043 8.008513 ACAGTCTACACGATCTATGGTAAAAT 57.991 34.615 0.00 0.00 0.00 1.82
3475 4044 7.400599 ACAGTCTACACGATCTATGGTAAAA 57.599 36.000 0.00 0.00 0.00 1.52
3476 4045 7.989170 TCTACAGTCTACACGATCTATGGTAAA 59.011 37.037 0.00 0.00 0.00 2.01
3477 4046 7.503549 TCTACAGTCTACACGATCTATGGTAA 58.496 38.462 0.00 0.00 0.00 2.85
3478 4047 7.059202 TCTACAGTCTACACGATCTATGGTA 57.941 40.000 0.00 0.00 0.00 3.25
3479 4048 5.926663 TCTACAGTCTACACGATCTATGGT 58.073 41.667 0.00 0.00 0.00 3.55
3480 4049 5.992829 ACTCTACAGTCTACACGATCTATGG 59.007 44.000 0.00 0.00 0.00 2.74
3481 4050 7.868922 ACTACTCTACAGTCTACACGATCTATG 59.131 40.741 0.00 0.00 33.62 2.23
3482 4051 7.868922 CACTACTCTACAGTCTACACGATCTAT 59.131 40.741 0.00 0.00 33.62 1.98
3483 4052 7.147932 ACACTACTCTACAGTCTACACGATCTA 60.148 40.741 0.00 0.00 33.62 1.98
3484 4053 6.044046 CACTACTCTACAGTCTACACGATCT 58.956 44.000 0.00 0.00 33.62 2.75
3485 4054 5.811613 ACACTACTCTACAGTCTACACGATC 59.188 44.000 0.00 0.00 33.62 3.69
3486 4055 5.732633 ACACTACTCTACAGTCTACACGAT 58.267 41.667 0.00 0.00 33.62 3.73
3487 4056 5.144692 ACACTACTCTACAGTCTACACGA 57.855 43.478 0.00 0.00 33.62 4.35
3488 4057 6.098679 ACTACACTACTCTACAGTCTACACG 58.901 44.000 0.00 0.00 33.62 4.49
3489 4058 7.903995 AACTACACTACTCTACAGTCTACAC 57.096 40.000 0.00 0.00 33.62 2.90
3490 4059 8.915057 AAAACTACACTACTCTACAGTCTACA 57.085 34.615 0.00 0.00 33.62 2.74
3513 4082 1.957877 CTACACCCCCGCAAAGAAAAA 59.042 47.619 0.00 0.00 0.00 1.94
3514 4083 1.143277 TCTACACCCCCGCAAAGAAAA 59.857 47.619 0.00 0.00 0.00 2.29
3515 4084 0.766131 TCTACACCCCCGCAAAGAAA 59.234 50.000 0.00 0.00 0.00 2.52
3516 4085 0.323629 CTCTACACCCCCGCAAAGAA 59.676 55.000 0.00 0.00 0.00 2.52
3517 4086 0.834687 ACTCTACACCCCCGCAAAGA 60.835 55.000 0.00 0.00 0.00 2.52
3518 4087 0.899720 TACTCTACACCCCCGCAAAG 59.100 55.000 0.00 0.00 0.00 2.77
3519 4088 0.899720 CTACTCTACACCCCCGCAAA 59.100 55.000 0.00 0.00 0.00 3.68
3520 4089 0.251922 ACTACTCTACACCCCCGCAA 60.252 55.000 0.00 0.00 0.00 4.85
3521 4090 0.968901 CACTACTCTACACCCCCGCA 60.969 60.000 0.00 0.00 0.00 5.69
3522 4091 0.969409 ACACTACTCTACACCCCCGC 60.969 60.000 0.00 0.00 0.00 6.13
3523 4092 2.295885 CTACACTACTCTACACCCCCG 58.704 57.143 0.00 0.00 0.00 5.73
3524 4093 3.378861 ACTACACTACTCTACACCCCC 57.621 52.381 0.00 0.00 0.00 5.40
3525 4094 5.735285 AAAACTACACTACTCTACACCCC 57.265 43.478 0.00 0.00 0.00 4.95
3545 4114 1.957877 CTACACCCCCGCAAAGAAAAA 59.042 47.619 0.00 0.00 0.00 1.94
3546 4115 1.143277 TCTACACCCCCGCAAAGAAAA 59.857 47.619 0.00 0.00 0.00 2.29
3547 4116 0.766131 TCTACACCCCCGCAAAGAAA 59.234 50.000 0.00 0.00 0.00 2.52
3548 4117 0.323629 CTCTACACCCCCGCAAAGAA 59.676 55.000 0.00 0.00 0.00 2.52
3549 4118 0.834687 ACTCTACACCCCCGCAAAGA 60.835 55.000 0.00 0.00 0.00 2.52
3550 4119 0.899720 TACTCTACACCCCCGCAAAG 59.100 55.000 0.00 0.00 0.00 2.77
3551 4120 0.899720 CTACTCTACACCCCCGCAAA 59.100 55.000 0.00 0.00 0.00 3.68
3552 4121 0.251922 ACTACTCTACACCCCCGCAA 60.252 55.000 0.00 0.00 0.00 4.85
3553 4122 0.968901 CACTACTCTACACCCCCGCA 60.969 60.000 0.00 0.00 0.00 5.69
3554 4123 0.969409 ACACTACTCTACACCCCCGC 60.969 60.000 0.00 0.00 0.00 6.13
3555 4124 2.295885 CTACACTACTCTACACCCCCG 58.704 57.143 0.00 0.00 0.00 5.73
3556 4125 3.378861 ACTACACTACTCTACACCCCC 57.621 52.381 0.00 0.00 0.00 5.40
3557 4126 4.085009 ACAACTACACTACTCTACACCCC 58.915 47.826 0.00 0.00 0.00 4.95
3558 4127 5.942826 ACTACAACTACACTACTCTACACCC 59.057 44.000 0.00 0.00 0.00 4.61
3559 4128 8.553459 TTACTACAACTACACTACTCTACACC 57.447 38.462 0.00 0.00 0.00 4.16
3766 4338 4.525100 TGCCCCCTAACTTTAAAACATGTC 59.475 41.667 0.00 0.00 0.00 3.06
3802 4374 3.120165 GGAAGAAAGAAAACAGCCTAGCG 60.120 47.826 0.00 0.00 0.00 4.26
3871 4443 3.708220 GAGGACAGCGGCGGAAGAG 62.708 68.421 9.78 0.00 0.00 2.85
3913 4485 0.243907 CTCACCATCAACGACCGAGT 59.756 55.000 0.00 0.00 0.00 4.18
3923 4495 2.359169 GCGACCCTCCTCACCATCA 61.359 63.158 0.00 0.00 0.00 3.07
3924 4496 2.501610 GCGACCCTCCTCACCATC 59.498 66.667 0.00 0.00 0.00 3.51
3950 4522 0.111001 CTAAAAACGGTCCACACGCG 60.111 55.000 3.53 3.53 34.00 6.01
3952 4524 0.236449 GCCTAAAAACGGTCCACACG 59.764 55.000 0.00 0.00 37.36 4.49
3975 4547 5.599999 ACAGCCTAACAACCTAGACTATG 57.400 43.478 0.00 0.00 0.00 2.23
3976 4548 5.720041 TGAACAGCCTAACAACCTAGACTAT 59.280 40.000 0.00 0.00 0.00 2.12
3986 4558 2.301870 AGGACGATGAACAGCCTAACAA 59.698 45.455 0.00 0.00 0.00 2.83
3988 4560 2.271800 CAGGACGATGAACAGCCTAAC 58.728 52.381 0.00 0.00 0.00 2.34
3994 4566 1.363744 GAAGCCAGGACGATGAACAG 58.636 55.000 0.00 0.00 0.00 3.16
4000 4572 4.514577 CGCCGAAGCCAGGACGAT 62.515 66.667 0.00 0.00 34.57 3.73
4021 4593 7.471604 GAATCTTTATTCAGCGTTGTCATCGC 61.472 42.308 18.40 18.40 42.42 4.58
4035 4607 8.845227 GGGAAAGGATCTGAAGAATCTTTATTC 58.155 37.037 0.00 0.00 41.65 1.75
4038 4610 6.156256 TCGGGAAAGGATCTGAAGAATCTTTA 59.844 38.462 0.00 0.00 33.64 1.85
4046 4618 3.494048 CCTCATCGGGAAAGGATCTGAAG 60.494 52.174 0.00 0.00 31.44 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.