Multiple sequence alignment - TraesCS7D01G456000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G456000 chr7D 100.000 4568 0 0 1 4568 574821046 574816479 0.000000e+00 8436
1 TraesCS7D01G456000 chr7D 83.178 963 89 34 2905 3830 574803803 574802877 0.000000e+00 813
2 TraesCS7D01G456000 chr7D 88.641 449 49 2 2455 2902 574804295 574803848 3.110000e-151 545
3 TraesCS7D01G456000 chr7D 91.875 320 20 6 3816 4131 538598554 538598871 4.190000e-120 442
4 TraesCS7D01G456000 chr7D 97.000 100 3 0 2253 2352 574806564 574806465 7.860000e-38 169
5 TraesCS7D01G456000 chr7A 87.015 2988 226 67 2 2912 664475580 664472678 0.000000e+00 3219
6 TraesCS7D01G456000 chr7A 89.600 750 31 9 3114 3821 664472349 664471605 0.000000e+00 909
7 TraesCS7D01G456000 chr7A 82.988 964 91 33 2905 3830 664434584 664433656 0.000000e+00 804
8 TraesCS7D01G456000 chr7A 94.712 208 11 0 2907 3114 664472640 664472433 1.590000e-84 324
9 TraesCS7D01G456000 chr7A 96.000 100 4 0 2253 2352 664468911 664468812 3.660000e-36 163
10 TraesCS7D01G456000 chr7B 95.937 1083 40 3 1831 2912 634835876 634834797 0.000000e+00 1753
11 TraesCS7D01G456000 chr7B 92.789 943 33 6 2905 3821 634834761 634833828 0.000000e+00 1332
12 TraesCS7D01G456000 chr7B 87.157 693 44 14 470 1135 634837233 634836559 0.000000e+00 745
13 TraesCS7D01G456000 chr7B 81.081 925 97 36 2905 3800 634829615 634828740 0.000000e+00 667
14 TraesCS7D01G456000 chr7B 83.010 618 56 27 1223 1835 634836511 634835938 8.760000e-142 514
15 TraesCS7D01G456000 chr7B 85.446 426 42 16 44 467 634848680 634848273 4.220000e-115 425
16 TraesCS7D01G456000 chr7B 91.000 100 9 0 2253 2352 634831106 634831007 7.970000e-28 135
17 TraesCS7D01G456000 chr5B 91.367 417 26 6 3819 4227 506503538 506503124 3.090000e-156 562
18 TraesCS7D01G456000 chr5B 90.488 410 31 3 3821 4223 364104897 364105305 6.730000e-148 534
19 TraesCS7D01G456000 chr1B 90.529 359 25 7 3813 4163 444679830 444679473 2.490000e-127 466
20 TraesCS7D01G456000 chr6B 91.254 343 27 1 4229 4568 718475386 718475728 8.950000e-127 464
21 TraesCS7D01G456000 chr3D 93.103 319 18 3 3816 4131 320412898 320413215 8.950000e-127 464
22 TraesCS7D01G456000 chr3D 90.735 313 22 4 3820 4131 569791913 569792219 1.180000e-110 411
23 TraesCS7D01G456000 chr3D 91.908 173 14 0 4224 4396 537653650 537653478 4.570000e-60 243
24 TraesCS7D01G456000 chr3D 91.503 153 13 0 4244 4396 537648444 537648292 1.290000e-50 211
25 TraesCS7D01G456000 chr2B 91.212 330 26 3 3818 4146 388887873 388888200 3.240000e-121 446
26 TraesCS7D01G456000 chr5D 90.616 341 22 6 3819 4156 524591158 524590825 1.170000e-120 444
27 TraesCS7D01G456000 chr5D 89.118 340 25 9 3821 4156 436204835 436205166 3.290000e-111 412
28 TraesCS7D01G456000 chr6D 86.944 360 20 9 4224 4568 473102356 473102703 3.340000e-101 379
29 TraesCS7D01G456000 chr1D 89.899 99 10 0 4224 4322 246507868 246507770 1.330000e-25 128


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G456000 chr7D 574816479 574821046 4567 True 8436.000000 8436 100.000000 1 4568 1 chr7D.!!$R1 4567
1 TraesCS7D01G456000 chr7D 574802877 574806564 3687 True 509.000000 813 89.606333 2253 3830 3 chr7D.!!$R2 1577
2 TraesCS7D01G456000 chr7A 664468812 664475580 6768 True 1153.750000 3219 91.831750 2 3821 4 chr7A.!!$R2 3819
3 TraesCS7D01G456000 chr7A 664433656 664434584 928 True 804.000000 804 82.988000 2905 3830 1 chr7A.!!$R1 925
4 TraesCS7D01G456000 chr7B 634828740 634837233 8493 True 857.666667 1753 88.495667 470 3821 6 chr7B.!!$R2 3351

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
468 476 0.476338 TCTCTCCCTGATCTCCTCGG 59.524 60.000 0.0 0.0 0.0 4.63 F
1237 1320 0.034896 ATCCGGGTACAATCCATCGC 59.965 55.000 0.0 0.0 0.0 4.58 F
1250 1333 1.134699 TCCATCGCTGCTTTAGTCCAG 60.135 52.381 0.0 0.0 0.0 3.86 F
2316 2479 2.208872 AGACAAATATCCCCAGCACCT 58.791 47.619 0.0 0.0 0.0 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2024 2187 0.035458 AGAAAGGGAACTCCGCAGTG 59.965 55.000 0.00 0.0 42.68 3.66 R
2367 4656 3.108144 CGCAAACAACTCCTGACAAAAG 58.892 45.455 0.00 0.0 0.00 2.27 R
2710 5001 3.548818 CCAAACAACAGCTGAGTGTAAGC 60.549 47.826 23.35 0.0 41.15 3.09 R
3911 11568 0.036164 ACCGTGTTATGCAGGCTCAA 59.964 50.000 0.00 0.0 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.885413 CACTCATGCTTCCATTCCAAAAA 58.115 39.130 0.00 0.00 0.00 1.94
30 31 8.319881 TCATGCTTCCATTCCAAAAATATCAAA 58.680 29.630 0.00 0.00 0.00 2.69
94 97 7.011482 GTCCAGAAGACATGTATGTACATTTCC 59.989 40.741 14.77 3.43 44.57 3.13
99 102 8.498054 AAGACATGTATGTACATTTCCTGAAG 57.502 34.615 14.77 0.00 43.99 3.02
105 108 9.911788 ATGTATGTACATTTCCTGAAGAATTCT 57.088 29.630 14.77 0.88 44.25 2.40
138 141 8.859090 ACATCAAAATCCATAAAGAGACACAAA 58.141 29.630 0.00 0.00 0.00 2.83
332 336 9.781834 TTACACACTTAACTTTGATGTTTTCAG 57.218 29.630 0.00 0.00 35.27 3.02
337 341 7.166473 CACTTAACTTTGATGTTTTCAGAGTGC 59.834 37.037 0.23 0.00 46.18 4.40
339 343 3.876914 ACTTTGATGTTTTCAGAGTGCGA 59.123 39.130 0.00 0.00 45.41 5.10
340 344 4.516698 ACTTTGATGTTTTCAGAGTGCGAT 59.483 37.500 0.00 0.00 45.41 4.58
343 347 3.189080 TGATGTTTTCAGAGTGCGATTGG 59.811 43.478 0.00 0.00 0.00 3.16
353 357 1.134401 AGTGCGATTGGTATCACCTGG 60.134 52.381 0.00 0.00 39.58 4.45
399 403 4.519540 AAAAACTATGCGTGAAAGCCAT 57.480 36.364 0.00 0.00 36.02 4.40
400 404 4.519540 AAAACTATGCGTGAAAGCCATT 57.480 36.364 0.00 0.00 36.02 3.16
401 405 3.764885 AACTATGCGTGAAAGCCATTC 57.235 42.857 0.00 0.00 38.60 2.67
433 437 6.493166 ACTGGTCAAAATCAGATCCCAAATA 58.507 36.000 0.00 0.00 35.20 1.40
436 440 9.135189 CTGGTCAAAATCAGATCCCAAATAATA 57.865 33.333 0.00 0.00 33.11 0.98
444 452 7.728847 TCAGATCCCAAATAATATGTGTTCG 57.271 36.000 0.00 0.00 0.00 3.95
458 466 2.035961 TGTGTTCGTCTTTCTCTCCCTG 59.964 50.000 0.00 0.00 0.00 4.45
464 472 2.360801 CGTCTTTCTCTCCCTGATCTCC 59.639 54.545 0.00 0.00 0.00 3.71
467 475 2.356665 TTCTCTCCCTGATCTCCTCG 57.643 55.000 0.00 0.00 0.00 4.63
468 476 0.476338 TCTCTCCCTGATCTCCTCGG 59.524 60.000 0.00 0.00 0.00 4.63
509 527 2.432628 GCCACCTCCGTCTTCACG 60.433 66.667 0.00 0.00 46.29 4.35
549 567 2.520741 CGAGCCTCCTCCTCCCTC 60.521 72.222 0.00 0.00 34.49 4.30
557 575 1.687493 CCTCCTCCCTCACCCAGAC 60.687 68.421 0.00 0.00 0.00 3.51
684 716 3.326747 GGGTGCCTCGTTATAGCTAATG 58.673 50.000 0.00 0.00 0.00 1.90
854 900 1.656652 CCCAACTCTCGGCATAACTG 58.343 55.000 0.00 0.00 0.00 3.16
856 902 1.656652 CAACTCTCGGCATAACTGGG 58.343 55.000 0.00 0.00 0.00 4.45
901 948 2.485814 GGATGGTCAGCTTGTCTTGTTC 59.514 50.000 0.00 0.00 0.00 3.18
961 1013 1.728971 CGTCACAGCTCATTCCTTCAC 59.271 52.381 0.00 0.00 0.00 3.18
962 1014 2.079925 GTCACAGCTCATTCCTTCACC 58.920 52.381 0.00 0.00 0.00 4.02
963 1015 1.699083 TCACAGCTCATTCCTTCACCA 59.301 47.619 0.00 0.00 0.00 4.17
1144 1197 1.134580 CCCTGCAGAGACATACCACTG 60.135 57.143 17.39 0.00 0.00 3.66
1159 1239 2.291930 ACCACTGTGTTTTCTTTGGGGA 60.292 45.455 7.08 0.00 0.00 4.81
1163 1243 5.508994 CCACTGTGTTTTCTTTGGGGATTAC 60.509 44.000 7.08 0.00 0.00 1.89
1200 1280 1.147600 GGTCGTTCCCAAGTGGTGT 59.852 57.895 0.00 0.00 34.77 4.16
1206 1286 0.323629 TTCCCAAGTGGTGTCGATCC 59.676 55.000 0.00 0.00 34.77 3.36
1207 1287 0.544357 TCCCAAGTGGTGTCGATCCT 60.544 55.000 10.20 0.00 34.77 3.24
1225 1308 3.120108 TCCTTTTCCTATGAATCCGGGT 58.880 45.455 0.00 0.00 0.00 5.28
1237 1320 0.034896 ATCCGGGTACAATCCATCGC 59.965 55.000 0.00 0.00 0.00 4.58
1250 1333 1.134699 TCCATCGCTGCTTTAGTCCAG 60.135 52.381 0.00 0.00 0.00 3.86
1317 1405 3.812053 GCTACTGCTATGAATGGACCAAG 59.188 47.826 0.00 0.00 36.03 3.61
1454 1549 6.366877 CAGAGCCAATTGTTTTGTTTAGGATG 59.633 38.462 4.43 0.00 0.00 3.51
1488 1583 9.707957 ATAATTGTAAGGGATGGATGTACAAAA 57.292 29.630 0.00 0.00 37.97 2.44
1489 1584 6.827586 TTGTAAGGGATGGATGTACAAAAC 57.172 37.500 0.00 0.00 33.07 2.43
1490 1585 5.882040 TGTAAGGGATGGATGTACAAAACA 58.118 37.500 0.00 0.00 43.86 2.83
1491 1586 5.943416 TGTAAGGGATGGATGTACAAAACAG 59.057 40.000 0.00 0.00 42.70 3.16
1492 1587 4.657814 AGGGATGGATGTACAAAACAGT 57.342 40.909 0.00 0.00 42.70 3.55
1493 1588 4.589908 AGGGATGGATGTACAAAACAGTC 58.410 43.478 0.00 0.00 42.70 3.51
1494 1589 4.289672 AGGGATGGATGTACAAAACAGTCT 59.710 41.667 0.00 0.00 42.70 3.24
1512 1607 4.627467 CAGTCTACTCGATCAACCCAAAAG 59.373 45.833 0.00 0.00 0.00 2.27
1530 1625 8.711170 ACCCAAAAGATATTATAAAGTCTCGGA 58.289 33.333 4.13 0.00 0.00 4.55
1544 1639 7.681939 AAAGTCTCGGAATTGCTTAAATACA 57.318 32.000 0.00 0.00 0.00 2.29
1613 1708 9.787532 AAATTTCATCGTTATCAATTTCATCGT 57.212 25.926 0.00 0.00 0.00 3.73
1614 1709 9.787532 AATTTCATCGTTATCAATTTCATCGTT 57.212 25.926 0.00 0.00 0.00 3.85
1695 1790 6.258068 GTGGAATGATACAGGTTAGTAGCAAC 59.742 42.308 0.00 0.00 42.79 4.17
1837 2000 7.006509 ACAAATATTTCTAGCTATGGCACCAT 58.993 34.615 7.45 7.45 41.70 3.55
1848 2011 3.598693 ATGGCACCATTGATCACCATA 57.401 42.857 10.67 0.00 36.16 2.74
1875 2038 8.721019 AAAATTATTGGTTCATTGCATACTGG 57.279 30.769 0.00 0.00 0.00 4.00
1910 2073 6.782082 AGCAGAAGAGATACAGACAATACA 57.218 37.500 0.00 0.00 0.00 2.29
1994 2157 5.357596 GGAGAACTGAATACGAGTACCTTCT 59.642 44.000 0.00 0.00 0.00 2.85
2024 2187 7.975866 ATTTCTCGTTGTTGCAATTATGATC 57.024 32.000 0.59 0.00 0.00 2.92
2085 2248 9.577110 TTTGTTGGAGTATATAGTACTTTGACG 57.423 33.333 0.00 0.00 0.00 4.35
2316 2479 2.208872 AGACAAATATCCCCAGCACCT 58.791 47.619 0.00 0.00 0.00 4.00
2364 4653 3.379452 AGGCTCTTAATCTGCAGGTACT 58.621 45.455 15.13 0.00 43.88 2.73
2410 4699 6.759827 TGCGTACTGACTTTAACTCTTTCTTT 59.240 34.615 0.00 0.00 0.00 2.52
2411 4700 7.042925 TGCGTACTGACTTTAACTCTTTCTTTC 60.043 37.037 0.00 0.00 0.00 2.62
2488 4778 7.339466 ACTGAAACCAACTAAAGTGTTCAATCT 59.661 33.333 0.00 0.00 0.00 2.40
2494 4784 7.285401 ACCAACTAAAGTGTTCAATCTGTTCAT 59.715 33.333 0.00 0.00 0.00 2.57
2734 5025 0.031178 CACTCAGCTGTTGTTTGGCC 59.969 55.000 14.67 0.00 0.00 5.36
2755 5046 5.409214 GGCCAAACGTTGTTCTACAATACTA 59.591 40.000 0.00 0.00 40.59 1.82
2926 5302 6.884832 TGACTTCTCTTACAACTCCAAAAGA 58.115 36.000 0.00 0.00 0.00 2.52
3284 5767 8.396272 AGTCTGTGCTTGTATATTTTGTTTCT 57.604 30.769 0.00 0.00 0.00 2.52
3543 6036 3.737172 CGCCCTGAAAACCAGCCG 61.737 66.667 0.00 0.00 41.57 5.52
3589 6082 3.988379 AAATGCAGCTGTTTTTCGAGA 57.012 38.095 16.64 0.00 0.00 4.04
3646 11275 2.505407 TGGTGTCCATGGATGTAGAAGG 59.495 50.000 19.62 0.00 0.00 3.46
3653 11282 2.698855 TGGATGTAGAAGGAGCTTGC 57.301 50.000 0.00 0.00 0.00 4.01
3654 11283 2.191400 TGGATGTAGAAGGAGCTTGCT 58.809 47.619 0.00 0.00 0.00 3.91
3655 11284 2.169352 TGGATGTAGAAGGAGCTTGCTC 59.831 50.000 13.69 13.69 0.00 4.26
3656 11285 2.433970 GGATGTAGAAGGAGCTTGCTCT 59.566 50.000 20.12 3.52 0.00 4.09
3657 11286 3.118445 GGATGTAGAAGGAGCTTGCTCTT 60.118 47.826 20.12 11.62 0.00 2.85
3755 11406 0.041238 AGCAGGGCAGTCCAGTACTA 59.959 55.000 0.00 0.00 35.76 1.82
3757 11408 1.202580 GCAGGGCAGTCCAGTACTATG 60.203 57.143 0.00 0.00 35.76 2.23
3821 11478 0.620556 ACTGCTGGGGTGAACATAGG 59.379 55.000 0.00 0.00 0.00 2.57
3824 11481 0.394352 GCTGGGGTGAACATAGGGTG 60.394 60.000 0.00 0.00 0.00 4.61
3830 11487 2.556622 GGGTGAACATAGGGTGTGTTTG 59.443 50.000 0.00 0.00 41.14 2.93
3831 11488 2.556622 GGTGAACATAGGGTGTGTTTGG 59.443 50.000 0.00 0.00 41.14 3.28
3832 11489 3.219281 GTGAACATAGGGTGTGTTTGGT 58.781 45.455 0.00 0.00 41.14 3.67
3833 11490 3.634910 GTGAACATAGGGTGTGTTTGGTT 59.365 43.478 0.00 0.00 41.14 3.67
3834 11491 3.634448 TGAACATAGGGTGTGTTTGGTTG 59.366 43.478 0.00 0.00 41.14 3.77
3835 11492 1.960689 ACATAGGGTGTGTTTGGTTGC 59.039 47.619 0.00 0.00 40.28 4.17
3837 11494 0.468400 TAGGGTGTGTTTGGTTGCCC 60.468 55.000 0.00 0.00 36.46 5.36
3839 11496 2.279186 GTGTGTTTGGTTGCCCGC 60.279 61.111 0.00 0.00 0.00 6.13
3842 11499 1.372872 GTGTTTGGTTGCCCGCATC 60.373 57.895 0.00 0.00 0.00 3.91
3844 11501 2.281831 TTTGGTTGCCCGCATCGA 60.282 55.556 0.00 0.00 0.00 3.59
3845 11502 2.331893 TTTGGTTGCCCGCATCGAG 61.332 57.895 0.00 0.00 0.00 4.04
3854 11511 3.197790 CGCATCGAGCCCAACCAG 61.198 66.667 0.00 0.00 41.38 4.00
3855 11512 3.512516 GCATCGAGCCCAACCAGC 61.513 66.667 0.00 0.00 37.23 4.85
3856 11513 2.825836 CATCGAGCCCAACCAGCC 60.826 66.667 0.00 0.00 0.00 4.85
3857 11514 4.115199 ATCGAGCCCAACCAGCCC 62.115 66.667 0.00 0.00 0.00 5.19
3877 11534 2.562912 CGCGGTGCAGCATCTTTT 59.437 55.556 17.33 0.00 36.85 2.27
3878 11535 1.512734 CGCGGTGCAGCATCTTTTC 60.513 57.895 17.33 0.00 36.85 2.29
3880 11537 1.135315 CGGTGCAGCATCTTTTCGG 59.865 57.895 17.33 0.00 0.00 4.30
3881 11538 1.298157 CGGTGCAGCATCTTTTCGGA 61.298 55.000 17.33 0.00 0.00 4.55
3883 11540 0.169009 GTGCAGCATCTTTTCGGACC 59.831 55.000 0.00 0.00 0.00 4.46
3884 11541 0.036732 TGCAGCATCTTTTCGGACCT 59.963 50.000 0.00 0.00 0.00 3.85
3885 11542 0.729690 GCAGCATCTTTTCGGACCTC 59.270 55.000 0.00 0.00 0.00 3.85
3886 11543 1.002366 CAGCATCTTTTCGGACCTCG 58.998 55.000 0.00 0.00 40.90 4.63
3887 11544 0.608640 AGCATCTTTTCGGACCTCGT 59.391 50.000 0.00 0.00 40.32 4.18
3888 11545 1.002087 AGCATCTTTTCGGACCTCGTT 59.998 47.619 0.00 0.00 40.32 3.85
3889 11546 1.128692 GCATCTTTTCGGACCTCGTTG 59.871 52.381 0.00 0.00 40.32 4.10
3890 11547 2.413837 CATCTTTTCGGACCTCGTTGT 58.586 47.619 0.00 0.00 40.32 3.32
3891 11548 2.607631 TCTTTTCGGACCTCGTTGTT 57.392 45.000 0.00 0.00 40.32 2.83
3892 11549 2.908916 TCTTTTCGGACCTCGTTGTTT 58.091 42.857 0.00 0.00 40.32 2.83
3893 11550 2.610374 TCTTTTCGGACCTCGTTGTTTG 59.390 45.455 0.00 0.00 40.32 2.93
3894 11551 1.301423 TTTCGGACCTCGTTGTTTGG 58.699 50.000 0.00 0.00 40.32 3.28
3896 11553 0.178533 TCGGACCTCGTTGTTTGGTT 59.821 50.000 0.00 0.00 40.32 3.67
3898 11555 1.003223 CGGACCTCGTTGTTTGGTTTC 60.003 52.381 0.00 0.00 33.74 2.78
3899 11556 2.294979 GGACCTCGTTGTTTGGTTTCT 58.705 47.619 0.00 0.00 33.74 2.52
3900 11557 2.289820 GGACCTCGTTGTTTGGTTTCTC 59.710 50.000 0.00 0.00 33.74 2.87
3901 11558 1.937899 ACCTCGTTGTTTGGTTTCTCG 59.062 47.619 0.00 0.00 0.00 4.04
3902 11559 1.333791 CCTCGTTGTTTGGTTTCTCGC 60.334 52.381 0.00 0.00 0.00 5.03
3907 11564 3.303461 CGTTGTTTGGTTTCTCGCATACA 60.303 43.478 0.00 0.00 0.00 2.29
3908 11565 3.889196 TGTTTGGTTTCTCGCATACAC 57.111 42.857 0.00 0.00 0.00 2.90
3909 11566 3.472652 TGTTTGGTTTCTCGCATACACT 58.527 40.909 0.00 0.00 0.00 3.55
3911 11568 2.831685 TGGTTTCTCGCATACACTGT 57.168 45.000 0.00 0.00 0.00 3.55
3912 11569 3.120321 TGGTTTCTCGCATACACTGTT 57.880 42.857 0.00 0.00 0.00 3.16
3914 11571 3.064207 GGTTTCTCGCATACACTGTTGA 58.936 45.455 0.00 0.00 0.00 3.18
3915 11572 3.123621 GGTTTCTCGCATACACTGTTGAG 59.876 47.826 0.00 0.00 33.40 3.02
3918 11575 0.608130 TCGCATACACTGTTGAGCCT 59.392 50.000 0.00 0.00 0.00 4.58
3919 11576 0.723414 CGCATACACTGTTGAGCCTG 59.277 55.000 0.00 0.00 0.00 4.85
3920 11577 0.449388 GCATACACTGTTGAGCCTGC 59.551 55.000 0.00 0.00 0.00 4.85
3921 11578 1.812235 CATACACTGTTGAGCCTGCA 58.188 50.000 0.00 0.00 0.00 4.41
3922 11579 2.362736 CATACACTGTTGAGCCTGCAT 58.637 47.619 0.00 0.00 0.00 3.96
3923 11580 3.534554 CATACACTGTTGAGCCTGCATA 58.465 45.455 0.00 0.00 0.00 3.14
3924 11581 2.566833 ACACTGTTGAGCCTGCATAA 57.433 45.000 0.00 0.00 0.00 1.90
3925 11582 2.154462 ACACTGTTGAGCCTGCATAAC 58.846 47.619 0.00 0.00 0.00 1.89
3926 11583 2.153645 CACTGTTGAGCCTGCATAACA 58.846 47.619 9.70 9.70 0.00 2.41
3927 11584 2.095567 CACTGTTGAGCCTGCATAACAC 60.096 50.000 6.99 0.00 0.00 3.32
3928 11585 1.129251 CTGTTGAGCCTGCATAACACG 59.871 52.381 6.99 0.00 0.00 4.49
3929 11586 0.447801 GTTGAGCCTGCATAACACGG 59.552 55.000 0.00 0.00 0.00 4.94
3930 11587 0.036164 TTGAGCCTGCATAACACGGT 59.964 50.000 0.00 0.00 0.00 4.83
3931 11588 0.036164 TGAGCCTGCATAACACGGTT 59.964 50.000 0.00 0.00 0.00 4.44
3932 11589 0.727398 GAGCCTGCATAACACGGTTC 59.273 55.000 0.00 0.00 0.00 3.62
3933 11590 0.324943 AGCCTGCATAACACGGTTCT 59.675 50.000 0.00 0.00 0.00 3.01
3934 11591 1.165270 GCCTGCATAACACGGTTCTT 58.835 50.000 0.00 0.00 0.00 2.52
3935 11592 2.027561 AGCCTGCATAACACGGTTCTTA 60.028 45.455 0.00 0.00 0.00 2.10
3936 11593 2.745281 GCCTGCATAACACGGTTCTTAA 59.255 45.455 0.00 0.00 0.00 1.85
3937 11594 3.189702 GCCTGCATAACACGGTTCTTAAA 59.810 43.478 0.00 0.00 0.00 1.52
3938 11595 4.320641 GCCTGCATAACACGGTTCTTAAAA 60.321 41.667 0.00 0.00 0.00 1.52
3939 11596 5.390613 CCTGCATAACACGGTTCTTAAAAG 58.609 41.667 0.00 0.00 0.00 2.27
3940 11597 4.789784 TGCATAACACGGTTCTTAAAAGC 58.210 39.130 0.00 0.00 0.00 3.51
3941 11598 4.276183 TGCATAACACGGTTCTTAAAAGCA 59.724 37.500 0.00 0.00 0.00 3.91
3942 11599 4.615541 GCATAACACGGTTCTTAAAAGCAC 59.384 41.667 0.00 0.00 0.00 4.40
3943 11600 3.703286 AACACGGTTCTTAAAAGCACC 57.297 42.857 1.87 1.87 38.71 5.01
3944 11601 1.951602 ACACGGTTCTTAAAAGCACCC 59.048 47.619 6.04 0.00 38.85 4.61
3945 11602 1.268625 CACGGTTCTTAAAAGCACCCC 59.731 52.381 6.04 0.00 38.85 4.95
3946 11603 1.144298 ACGGTTCTTAAAAGCACCCCT 59.856 47.619 6.04 0.00 38.85 4.79
3947 11604 1.539827 CGGTTCTTAAAAGCACCCCTG 59.460 52.381 6.04 0.00 38.85 4.45
3948 11605 1.893137 GGTTCTTAAAAGCACCCCTGG 59.107 52.381 0.55 0.00 36.49 4.45
3949 11606 1.893137 GTTCTTAAAAGCACCCCTGGG 59.107 52.381 5.50 5.50 42.03 4.45
3950 11607 0.251608 TCTTAAAAGCACCCCTGGGC 60.252 55.000 7.39 0.00 39.32 5.36
3951 11608 1.229051 TTAAAAGCACCCCTGGGCC 60.229 57.895 7.39 0.00 39.32 5.80
3952 11609 1.735455 TTAAAAGCACCCCTGGGCCT 61.735 55.000 7.39 0.00 39.32 5.19
3953 11610 2.439553 TAAAAGCACCCCTGGGCCTG 62.440 60.000 7.39 3.68 39.32 4.85
3975 11632 3.184206 GTTGGGAACGGCCGAATC 58.816 61.111 35.90 27.46 36.71 2.52
3976 11633 2.435234 TTGGGAACGGCCGAATCG 60.435 61.111 35.90 4.58 37.63 3.34
3986 11643 3.497879 CCGAATCGGCAGTTTCCC 58.502 61.111 9.39 0.00 41.17 3.97
3987 11644 2.461110 CCGAATCGGCAGTTTCCCG 61.461 63.158 9.39 0.00 46.88 5.14
3993 11650 2.436824 GGCAGTTTCCCGAGAGCC 60.437 66.667 0.00 0.00 34.71 4.70
3994 11651 2.347490 GCAGTTTCCCGAGAGCCA 59.653 61.111 0.00 0.00 0.00 4.75
3995 11652 1.743252 GCAGTTTCCCGAGAGCCAG 60.743 63.158 0.00 0.00 0.00 4.85
3996 11653 1.078848 CAGTTTCCCGAGAGCCAGG 60.079 63.158 0.00 0.00 0.00 4.45
3997 11654 2.436824 GTTTCCCGAGAGCCAGGC 60.437 66.667 1.84 1.84 0.00 4.85
3998 11655 2.607750 TTTCCCGAGAGCCAGGCT 60.608 61.111 16.12 16.12 43.88 4.58
4006 11663 2.841988 GAGCCAGGCTCGAGGGAT 60.842 66.667 26.09 5.51 45.85 3.85
4007 11664 3.160047 AGCCAGGCTCGAGGGATG 61.160 66.667 8.70 0.00 30.62 3.51
4008 11665 4.925861 GCCAGGCTCGAGGGATGC 62.926 72.222 15.58 0.00 0.00 3.91
4009 11666 3.160047 CCAGGCTCGAGGGATGCT 61.160 66.667 15.58 0.00 0.00 3.79
4010 11667 2.739996 CCAGGCTCGAGGGATGCTT 61.740 63.158 15.58 0.00 0.00 3.91
4011 11668 1.227497 CAGGCTCGAGGGATGCTTC 60.227 63.158 15.58 0.00 0.00 3.86
4012 11669 2.279784 GGCTCGAGGGATGCTTCG 60.280 66.667 15.58 12.62 38.13 3.79
4013 11670 2.786495 GGCTCGAGGGATGCTTCGA 61.786 63.158 19.74 19.74 42.91 3.71
4015 11672 3.526430 TCGAGGGATGCTTCGAGG 58.474 61.111 17.27 0.00 40.55 4.63
4016 11673 2.279784 CGAGGGATGCTTCGAGGC 60.280 66.667 13.56 13.36 39.06 4.70
4017 11674 2.279784 GAGGGATGCTTCGAGGCG 60.280 66.667 15.28 0.00 34.52 5.52
4018 11675 4.537433 AGGGATGCTTCGAGGCGC 62.537 66.667 15.28 9.21 34.52 6.53
4019 11676 4.838152 GGGATGCTTCGAGGCGCA 62.838 66.667 15.28 11.42 40.87 6.09
4021 11678 2.630317 GATGCTTCGAGGCGCATG 59.370 61.111 19.25 0.00 46.06 4.06
4022 11679 2.124983 ATGCTTCGAGGCGCATGT 60.125 55.556 15.28 0.00 44.53 3.21
4023 11680 2.370824 GATGCTTCGAGGCGCATGTG 62.371 60.000 19.25 0.66 46.06 3.21
4024 11681 3.869272 GCTTCGAGGCGCATGTGG 61.869 66.667 10.83 0.00 0.00 4.17
4025 11682 3.197790 CTTCGAGGCGCATGTGGG 61.198 66.667 10.83 0.00 0.00 4.61
4026 11683 3.958147 CTTCGAGGCGCATGTGGGT 62.958 63.158 10.83 0.00 0.00 4.51
4027 11684 4.758251 TCGAGGCGCATGTGGGTG 62.758 66.667 10.83 0.00 0.00 4.61
4033 11690 2.821366 CGCATGTGGGTGGCTCTC 60.821 66.667 0.00 0.00 0.00 3.20
4034 11691 2.673523 GCATGTGGGTGGCTCTCT 59.326 61.111 0.00 0.00 0.00 3.10
4035 11692 1.748122 GCATGTGGGTGGCTCTCTG 60.748 63.158 0.00 0.00 0.00 3.35
4036 11693 1.077930 CATGTGGGTGGCTCTCTGG 60.078 63.158 0.00 0.00 0.00 3.86
4037 11694 1.229625 ATGTGGGTGGCTCTCTGGA 60.230 57.895 0.00 0.00 0.00 3.86
4038 11695 1.270414 ATGTGGGTGGCTCTCTGGAG 61.270 60.000 0.00 0.00 42.18 3.86
4039 11696 1.610673 GTGGGTGGCTCTCTGGAGA 60.611 63.158 0.20 0.20 41.86 3.71
4044 11701 3.688086 GGCTCTCTGGAGACGTGT 58.312 61.111 0.00 0.00 41.86 4.49
4045 11702 1.214062 GGCTCTCTGGAGACGTGTG 59.786 63.158 0.00 0.00 41.86 3.82
4046 11703 1.528292 GGCTCTCTGGAGACGTGTGT 61.528 60.000 0.00 0.00 41.86 3.72
4047 11704 0.109504 GCTCTCTGGAGACGTGTGTC 60.110 60.000 0.00 0.00 45.86 3.67
4059 11716 3.169733 GACGTGTGTCTCGAGTTAATCC 58.830 50.000 13.13 0.00 42.08 3.01
4060 11717 2.094854 ACGTGTGTCTCGAGTTAATCCC 60.095 50.000 13.13 0.00 0.00 3.85
4061 11718 2.163815 CGTGTGTCTCGAGTTAATCCCT 59.836 50.000 13.13 0.00 0.00 4.20
4062 11719 3.731264 CGTGTGTCTCGAGTTAATCCCTC 60.731 52.174 13.13 0.00 0.00 4.30
4063 11720 3.444388 GTGTGTCTCGAGTTAATCCCTCT 59.556 47.826 13.13 0.00 0.00 3.69
4064 11721 3.695060 TGTGTCTCGAGTTAATCCCTCTC 59.305 47.826 13.13 0.00 0.00 3.20
4065 11722 3.949113 GTGTCTCGAGTTAATCCCTCTCT 59.051 47.826 13.13 0.00 0.00 3.10
4066 11723 4.035909 GTGTCTCGAGTTAATCCCTCTCTC 59.964 50.000 13.13 0.00 0.00 3.20
4067 11724 4.080243 TGTCTCGAGTTAATCCCTCTCTCT 60.080 45.833 13.13 0.00 0.00 3.10
4068 11725 4.514066 GTCTCGAGTTAATCCCTCTCTCTC 59.486 50.000 13.13 0.00 0.00 3.20
4069 11726 4.410883 TCTCGAGTTAATCCCTCTCTCTCT 59.589 45.833 13.13 0.00 0.00 3.10
4070 11727 4.710324 TCGAGTTAATCCCTCTCTCTCTC 58.290 47.826 0.00 0.00 0.00 3.20
4071 11728 3.818773 CGAGTTAATCCCTCTCTCTCTCC 59.181 52.174 0.00 0.00 0.00 3.71
4072 11729 4.149598 GAGTTAATCCCTCTCTCTCTCCC 58.850 52.174 0.00 0.00 0.00 4.30
4073 11730 3.797269 AGTTAATCCCTCTCTCTCTCCCT 59.203 47.826 0.00 0.00 0.00 4.20
4074 11731 4.985583 AGTTAATCCCTCTCTCTCTCCCTA 59.014 45.833 0.00 0.00 0.00 3.53
4075 11732 5.437043 AGTTAATCCCTCTCTCTCTCCCTAA 59.563 44.000 0.00 0.00 0.00 2.69
4076 11733 6.105589 AGTTAATCCCTCTCTCTCTCCCTAAT 59.894 42.308 0.00 0.00 0.00 1.73
4077 11734 4.675063 ATCCCTCTCTCTCTCCCTAATC 57.325 50.000 0.00 0.00 0.00 1.75
4078 11735 2.719705 TCCCTCTCTCTCTCCCTAATCC 59.280 54.545 0.00 0.00 0.00 3.01
4079 11736 2.721906 CCCTCTCTCTCTCCCTAATCCT 59.278 54.545 0.00 0.00 0.00 3.24
4080 11737 3.245264 CCCTCTCTCTCTCCCTAATCCTC 60.245 56.522 0.00 0.00 0.00 3.71
4081 11738 3.397618 CCTCTCTCTCTCCCTAATCCTCA 59.602 52.174 0.00 0.00 0.00 3.86
4082 11739 4.141041 CCTCTCTCTCTCCCTAATCCTCAA 60.141 50.000 0.00 0.00 0.00 3.02
4083 11740 5.459536 CCTCTCTCTCTCCCTAATCCTCAAT 60.460 48.000 0.00 0.00 0.00 2.57
4084 11741 5.640147 TCTCTCTCTCCCTAATCCTCAATC 58.360 45.833 0.00 0.00 0.00 2.67
4085 11742 4.746466 TCTCTCTCCCTAATCCTCAATCC 58.254 47.826 0.00 0.00 0.00 3.01
4086 11743 3.837731 CTCTCTCCCTAATCCTCAATCCC 59.162 52.174 0.00 0.00 0.00 3.85
4087 11744 2.909662 CTCTCCCTAATCCTCAATCCCC 59.090 54.545 0.00 0.00 0.00 4.81
4088 11745 2.528813 TCTCCCTAATCCTCAATCCCCT 59.471 50.000 0.00 0.00 0.00 4.79
4089 11746 2.909662 CTCCCTAATCCTCAATCCCCTC 59.090 54.545 0.00 0.00 0.00 4.30
4090 11747 2.528813 TCCCTAATCCTCAATCCCCTCT 59.471 50.000 0.00 0.00 0.00 3.69
4091 11748 2.909662 CCCTAATCCTCAATCCCCTCTC 59.090 54.545 0.00 0.00 0.00 3.20
4092 11749 3.440754 CCCTAATCCTCAATCCCCTCTCT 60.441 52.174 0.00 0.00 0.00 3.10
4093 11750 3.837731 CCTAATCCTCAATCCCCTCTCTC 59.162 52.174 0.00 0.00 0.00 3.20
4094 11751 3.723098 AATCCTCAATCCCCTCTCTCT 57.277 47.619 0.00 0.00 0.00 3.10
4095 11752 2.765689 TCCTCAATCCCCTCTCTCTC 57.234 55.000 0.00 0.00 0.00 3.20
4096 11753 1.219213 TCCTCAATCCCCTCTCTCTCC 59.781 57.143 0.00 0.00 0.00 3.71
4097 11754 1.715785 CTCAATCCCCTCTCTCTCCC 58.284 60.000 0.00 0.00 0.00 4.30
4098 11755 1.220236 CTCAATCCCCTCTCTCTCCCT 59.780 57.143 0.00 0.00 0.00 4.20
4099 11756 1.219213 TCAATCCCCTCTCTCTCCCTC 59.781 57.143 0.00 0.00 0.00 4.30
4100 11757 1.220236 CAATCCCCTCTCTCTCCCTCT 59.780 57.143 0.00 0.00 0.00 3.69
4101 11758 2.448961 CAATCCCCTCTCTCTCCCTCTA 59.551 54.545 0.00 0.00 0.00 2.43
4102 11759 1.525175 TCCCCTCTCTCTCCCTCTAC 58.475 60.000 0.00 0.00 0.00 2.59
4103 11760 1.011545 TCCCCTCTCTCTCCCTCTACT 59.988 57.143 0.00 0.00 0.00 2.57
4104 11761 1.423921 CCCCTCTCTCTCCCTCTACTC 59.576 61.905 0.00 0.00 0.00 2.59
4105 11762 1.423921 CCCTCTCTCTCCCTCTACTCC 59.576 61.905 0.00 0.00 0.00 3.85
4106 11763 2.131854 CCTCTCTCTCCCTCTACTCCA 58.868 57.143 0.00 0.00 0.00 3.86
4107 11764 2.106511 CCTCTCTCTCCCTCTACTCCAG 59.893 59.091 0.00 0.00 0.00 3.86
4108 11765 2.777692 CTCTCTCTCCCTCTACTCCAGT 59.222 54.545 0.00 0.00 0.00 4.00
4109 11766 2.507886 TCTCTCTCCCTCTACTCCAGTG 59.492 54.545 0.00 0.00 0.00 3.66
4110 11767 1.064314 TCTCTCCCTCTACTCCAGTGC 60.064 57.143 0.00 0.00 0.00 4.40
4111 11768 0.394488 TCTCCCTCTACTCCAGTGCG 60.394 60.000 0.00 0.00 0.00 5.34
4112 11769 0.394488 CTCCCTCTACTCCAGTGCGA 60.394 60.000 0.00 0.00 0.00 5.10
4113 11770 0.259065 TCCCTCTACTCCAGTGCGAT 59.741 55.000 0.00 0.00 0.00 4.58
4114 11771 0.671251 CCCTCTACTCCAGTGCGATC 59.329 60.000 0.00 0.00 0.00 3.69
4115 11772 0.671251 CCTCTACTCCAGTGCGATCC 59.329 60.000 0.00 0.00 0.00 3.36
4116 11773 0.671251 CTCTACTCCAGTGCGATCCC 59.329 60.000 0.00 0.00 0.00 3.85
4117 11774 1.101635 TCTACTCCAGTGCGATCCCG 61.102 60.000 0.00 0.00 39.16 5.14
4118 11775 1.379443 TACTCCAGTGCGATCCCGT 60.379 57.895 0.00 0.00 38.24 5.28
4119 11776 1.381928 TACTCCAGTGCGATCCCGTC 61.382 60.000 0.00 0.00 38.24 4.79
4128 11785 2.643844 GATCCCGTCGATCCCGTC 59.356 66.667 0.00 0.00 41.51 4.79
4129 11786 2.910994 ATCCCGTCGATCCCGTCC 60.911 66.667 0.00 0.00 37.05 4.79
4134 11791 3.912907 GTCGATCCCGTCCGCCAT 61.913 66.667 0.00 0.00 37.05 4.40
4135 11792 3.911698 TCGATCCCGTCCGCCATG 61.912 66.667 0.00 0.00 37.05 3.66
4136 11793 4.969196 CGATCCCGTCCGCCATGG 62.969 72.222 7.63 7.63 40.09 3.66
4144 11801 4.113815 TCCGCCATGGAAGCAGGG 62.114 66.667 18.40 6.00 46.38 4.45
4146 11803 4.113815 CGCCATGGAAGCAGGGGA 62.114 66.667 18.40 0.00 37.54 4.81
4147 11804 2.123982 GCCATGGAAGCAGGGGAG 60.124 66.667 18.40 0.00 0.00 4.30
4148 11805 2.123982 CCATGGAAGCAGGGGAGC 60.124 66.667 5.56 0.00 0.00 4.70
4149 11806 2.515523 CATGGAAGCAGGGGAGCG 60.516 66.667 0.00 0.00 40.15 5.03
4150 11807 3.801997 ATGGAAGCAGGGGAGCGG 61.802 66.667 0.00 0.00 40.15 5.52
4152 11809 3.483869 GGAAGCAGGGGAGCGGAT 61.484 66.667 0.00 0.00 40.15 4.18
4153 11810 2.110006 GAAGCAGGGGAGCGGATC 59.890 66.667 0.00 0.00 40.15 3.36
4162 11819 4.522971 GAGCGGATCCAACACCTC 57.477 61.111 13.41 5.21 0.00 3.85
4163 11820 1.519455 GAGCGGATCCAACACCTCG 60.519 63.158 13.41 0.00 0.00 4.63
4164 11821 2.227089 GAGCGGATCCAACACCTCGT 62.227 60.000 13.41 0.00 0.00 4.18
4165 11822 0.968901 AGCGGATCCAACACCTCGTA 60.969 55.000 13.41 0.00 0.00 3.43
4166 11823 0.527817 GCGGATCCAACACCTCGTAG 60.528 60.000 13.41 0.00 0.00 3.51
4167 11824 1.100510 CGGATCCAACACCTCGTAGA 58.899 55.000 13.41 0.00 0.00 2.59
4181 11838 3.965292 TCGTAGAGCGGATCAAAGTAG 57.035 47.619 0.00 0.00 41.72 2.57
4182 11839 3.538591 TCGTAGAGCGGATCAAAGTAGA 58.461 45.455 0.00 0.00 41.72 2.59
4183 11840 3.560481 TCGTAGAGCGGATCAAAGTAGAG 59.440 47.826 0.00 0.00 41.72 2.43
4184 11841 3.304123 CGTAGAGCGGATCAAAGTAGAGG 60.304 52.174 0.00 0.00 36.85 3.69
4185 11842 2.035632 AGAGCGGATCAAAGTAGAGGG 58.964 52.381 0.00 0.00 0.00 4.30
4186 11843 1.069358 GAGCGGATCAAAGTAGAGGGG 59.931 57.143 0.00 0.00 0.00 4.79
4187 11844 0.533085 GCGGATCAAAGTAGAGGGGC 60.533 60.000 0.00 0.00 0.00 5.80
4188 11845 0.249489 CGGATCAAAGTAGAGGGGCG 60.249 60.000 0.00 0.00 0.00 6.13
4189 11846 0.106894 GGATCAAAGTAGAGGGGCGG 59.893 60.000 0.00 0.00 0.00 6.13
4190 11847 1.120530 GATCAAAGTAGAGGGGCGGA 58.879 55.000 0.00 0.00 0.00 5.54
4191 11848 1.485066 GATCAAAGTAGAGGGGCGGAA 59.515 52.381 0.00 0.00 0.00 4.30
4192 11849 0.902531 TCAAAGTAGAGGGGCGGAAG 59.097 55.000 0.00 0.00 0.00 3.46
4193 11850 0.107654 CAAAGTAGAGGGGCGGAAGG 60.108 60.000 0.00 0.00 0.00 3.46
4204 11861 4.821589 CGGAAGGCGAGGCTGGAC 62.822 72.222 0.00 0.00 0.00 4.02
4205 11862 4.821589 GGAAGGCGAGGCTGGACG 62.822 72.222 0.00 0.00 0.00 4.79
4206 11863 4.821589 GAAGGCGAGGCTGGACGG 62.822 72.222 0.00 0.00 0.00 4.79
4209 11866 4.162690 GGCGAGGCTGGACGGAAT 62.163 66.667 0.00 0.00 0.00 3.01
4210 11867 2.586357 GCGAGGCTGGACGGAATC 60.586 66.667 0.00 0.00 0.00 2.52
4211 11868 2.892640 CGAGGCTGGACGGAATCA 59.107 61.111 0.00 0.00 0.00 2.57
4212 11869 1.218047 CGAGGCTGGACGGAATCAA 59.782 57.895 0.00 0.00 0.00 2.57
4213 11870 0.391130 CGAGGCTGGACGGAATCAAA 60.391 55.000 0.00 0.00 0.00 2.69
4214 11871 1.087501 GAGGCTGGACGGAATCAAAC 58.912 55.000 0.00 0.00 0.00 2.93
4215 11872 0.400213 AGGCTGGACGGAATCAAACA 59.600 50.000 0.00 0.00 0.00 2.83
4216 11873 0.521735 GGCTGGACGGAATCAAACAC 59.478 55.000 0.00 0.00 0.00 3.32
4217 11874 0.165944 GCTGGACGGAATCAAACACG 59.834 55.000 0.00 0.00 0.00 4.49
4218 11875 0.165944 CTGGACGGAATCAAACACGC 59.834 55.000 0.00 0.00 0.00 5.34
4219 11876 1.231958 TGGACGGAATCAAACACGCC 61.232 55.000 0.00 0.00 0.00 5.68
4220 11877 0.953960 GGACGGAATCAAACACGCCT 60.954 55.000 0.00 0.00 0.00 5.52
4221 11878 0.872388 GACGGAATCAAACACGCCTT 59.128 50.000 0.00 0.00 0.00 4.35
4222 11879 0.872388 ACGGAATCAAACACGCCTTC 59.128 50.000 0.00 0.00 0.00 3.46
4223 11880 0.168128 CGGAATCAAACACGCCTTCC 59.832 55.000 0.00 0.00 33.54 3.46
4224 11881 0.168128 GGAATCAAACACGCCTTCCG 59.832 55.000 0.00 0.00 44.21 4.30
4225 11882 0.454452 GAATCAAACACGCCTTCCGC 60.454 55.000 0.00 0.00 41.76 5.54
4226 11883 0.889186 AATCAAACACGCCTTCCGCT 60.889 50.000 0.00 0.00 41.76 5.52
4227 11884 0.036765 ATCAAACACGCCTTCCGCTA 60.037 50.000 0.00 0.00 41.76 4.26
4228 11885 0.947180 TCAAACACGCCTTCCGCTAC 60.947 55.000 0.00 0.00 41.76 3.58
4229 11886 0.949105 CAAACACGCCTTCCGCTACT 60.949 55.000 0.00 0.00 41.76 2.57
4230 11887 0.250166 AAACACGCCTTCCGCTACTT 60.250 50.000 0.00 0.00 41.76 2.24
4231 11888 0.669625 AACACGCCTTCCGCTACTTC 60.670 55.000 0.00 0.00 41.76 3.01
4232 11889 1.215647 CACGCCTTCCGCTACTTCT 59.784 57.895 0.00 0.00 41.76 2.85
4233 11890 0.802607 CACGCCTTCCGCTACTTCTC 60.803 60.000 0.00 0.00 41.76 2.87
4234 11891 1.227002 CGCCTTCCGCTACTTCTCC 60.227 63.158 0.00 0.00 34.21 3.71
4235 11892 1.668101 CGCCTTCCGCTACTTCTCCT 61.668 60.000 0.00 0.00 34.21 3.69
4236 11893 0.179097 GCCTTCCGCTACTTCTCCTG 60.179 60.000 0.00 0.00 0.00 3.86
4237 11894 0.461961 CCTTCCGCTACTTCTCCTGG 59.538 60.000 0.00 0.00 0.00 4.45
4238 11895 0.461961 CTTCCGCTACTTCTCCTGGG 59.538 60.000 0.00 0.00 0.00 4.45
4239 11896 1.614241 TTCCGCTACTTCTCCTGGGC 61.614 60.000 0.00 0.00 0.00 5.36
4240 11897 2.501610 CGCTACTTCTCCTGGGCC 59.498 66.667 0.00 0.00 0.00 5.80
4241 11898 2.501610 GCTACTTCTCCTGGGCCG 59.498 66.667 0.00 0.00 0.00 6.13
4242 11899 3.095347 GCTACTTCTCCTGGGCCGG 62.095 68.421 5.01 5.01 0.00 6.13
4243 11900 3.081409 TACTTCTCCTGGGCCGGC 61.081 66.667 21.18 21.18 0.00 6.13
4259 11916 4.971125 GCCACCGCCTATCGAGCC 62.971 72.222 0.00 0.00 41.67 4.70
4260 11917 3.227276 CCACCGCCTATCGAGCCT 61.227 66.667 0.00 0.00 41.67 4.58
4261 11918 2.336809 CACCGCCTATCGAGCCTC 59.663 66.667 0.00 0.00 41.67 4.70
4262 11919 2.913060 ACCGCCTATCGAGCCTCC 60.913 66.667 0.00 0.00 41.67 4.30
4263 11920 3.686045 CCGCCTATCGAGCCTCCC 61.686 72.222 0.00 0.00 41.67 4.30
4264 11921 3.686045 CGCCTATCGAGCCTCCCC 61.686 72.222 0.00 0.00 41.67 4.81
4265 11922 2.203714 GCCTATCGAGCCTCCCCT 60.204 66.667 0.00 0.00 0.00 4.79
4266 11923 2.578714 GCCTATCGAGCCTCCCCTG 61.579 68.421 0.00 0.00 0.00 4.45
4267 11924 2.578714 CCTATCGAGCCTCCCCTGC 61.579 68.421 0.00 0.00 0.00 4.85
4268 11925 2.912542 TATCGAGCCTCCCCTGCG 60.913 66.667 0.00 0.00 0.00 5.18
4269 11926 3.733507 TATCGAGCCTCCCCTGCGT 62.734 63.158 0.00 0.00 0.00 5.24
4337 11994 2.132300 GAGACCTCCATGAGCCTCC 58.868 63.158 0.00 0.00 0.00 4.30
4338 11995 1.743321 GAGACCTCCATGAGCCTCCG 61.743 65.000 0.00 0.00 0.00 4.63
4339 11996 3.453070 GACCTCCATGAGCCTCCGC 62.453 68.421 0.00 0.00 0.00 5.54
4340 11997 4.247380 CCTCCATGAGCCTCCGCC 62.247 72.222 0.00 0.00 34.57 6.13
4341 11998 4.598894 CTCCATGAGCCTCCGCCG 62.599 72.222 0.00 0.00 34.57 6.46
4394 12051 4.072088 CCGCGCGGAAGTTCACAC 62.072 66.667 44.86 0.00 37.50 3.82
4395 12052 3.036084 CGCGCGGAAGTTCACACT 61.036 61.111 24.84 0.00 33.11 3.55
4396 12053 2.551270 GCGCGGAAGTTCACACTG 59.449 61.111 8.83 0.00 31.60 3.66
4397 12054 2.954753 GCGCGGAAGTTCACACTGG 61.955 63.158 8.83 0.00 31.60 4.00
4398 12055 1.300620 CGCGGAAGTTCACACTGGA 60.301 57.895 5.01 0.00 31.60 3.86
4399 12056 1.284982 CGCGGAAGTTCACACTGGAG 61.285 60.000 5.01 0.00 31.60 3.86
4400 12057 1.569479 GCGGAAGTTCACACTGGAGC 61.569 60.000 5.01 0.00 31.60 4.70
4401 12058 0.249868 CGGAAGTTCACACTGGAGCA 60.250 55.000 5.01 0.00 31.60 4.26
4402 12059 1.517242 GGAAGTTCACACTGGAGCAG 58.483 55.000 5.01 0.00 37.52 4.24
4403 12060 0.871057 GAAGTTCACACTGGAGCAGC 59.129 55.000 0.00 0.00 34.37 5.25
4404 12061 0.471617 AAGTTCACACTGGAGCAGCT 59.528 50.000 0.00 0.00 34.37 4.24
4405 12062 0.250209 AGTTCACACTGGAGCAGCTG 60.250 55.000 10.11 10.11 34.37 4.24
4406 12063 0.533755 GTTCACACTGGAGCAGCTGT 60.534 55.000 16.64 1.59 34.37 4.40
4407 12064 0.250038 TTCACACTGGAGCAGCTGTC 60.250 55.000 16.64 11.31 34.37 3.51
4408 12065 1.670406 CACACTGGAGCAGCTGTCC 60.670 63.158 21.58 21.58 34.37 4.02
4409 12066 2.433838 CACTGGAGCAGCTGTCCG 60.434 66.667 22.32 19.44 36.82 4.79
4410 12067 4.385405 ACTGGAGCAGCTGTCCGC 62.385 66.667 22.32 8.01 36.82 5.54
4440 12097 2.657237 CTTCTCCGCGTCCAACCT 59.343 61.111 4.92 0.00 0.00 3.50
4441 12098 1.738099 CTTCTCCGCGTCCAACCTG 60.738 63.158 4.92 0.00 0.00 4.00
4442 12099 3.876589 TTCTCCGCGTCCAACCTGC 62.877 63.158 4.92 0.00 0.00 4.85
4443 12100 4.379243 CTCCGCGTCCAACCTGCT 62.379 66.667 4.92 0.00 0.00 4.24
4444 12101 4.373116 TCCGCGTCCAACCTGCTC 62.373 66.667 4.92 0.00 0.00 4.26
4450 12107 3.329889 TCCAACCTGCTCGGCCAT 61.330 61.111 2.24 0.00 35.61 4.40
4451 12108 3.136123 CCAACCTGCTCGGCCATG 61.136 66.667 2.24 0.00 35.61 3.66
4452 12109 3.136123 CAACCTGCTCGGCCATGG 61.136 66.667 7.63 7.63 35.61 3.66
4467 12124 4.349503 TGGCAGCTTCGGCATGGT 62.350 61.111 0.00 0.00 44.74 3.55
4468 12125 3.818787 GGCAGCTTCGGCATGGTG 61.819 66.667 0.00 0.00 44.74 4.17
4470 12127 1.745115 GCAGCTTCGGCATGGTGTA 60.745 57.895 0.00 0.00 44.74 2.90
4471 12128 1.982073 GCAGCTTCGGCATGGTGTAC 61.982 60.000 0.00 0.00 44.74 2.90
4474 12131 0.447801 GCTTCGGCATGGTGTACAAG 59.552 55.000 0.00 0.00 41.33 3.16
4475 12132 1.808411 CTTCGGCATGGTGTACAAGT 58.192 50.000 0.00 0.00 0.00 3.16
4477 12134 0.953471 TCGGCATGGTGTACAAGTGC 60.953 55.000 16.01 16.01 35.17 4.40
4479 12136 2.639970 GCATGGTGTACAAGTGCCA 58.360 52.632 14.24 10.39 35.28 4.92
4480 12137 1.176527 GCATGGTGTACAAGTGCCAT 58.823 50.000 9.38 9.38 41.92 4.40
4482 12139 2.715046 CATGGTGTACAAGTGCCATCT 58.285 47.619 11.72 0.00 39.47 2.90
4484 12141 1.003118 TGGTGTACAAGTGCCATCTCC 59.997 52.381 0.00 0.00 0.00 3.71
4486 12143 0.391130 TGTACAAGTGCCATCTCCGC 60.391 55.000 0.00 0.00 0.00 5.54
4490 12147 3.335356 AAGTGCCATCTCCGCCTGG 62.335 63.158 0.00 0.00 35.53 4.45
4491 12148 3.785859 GTGCCATCTCCGCCTGGA 61.786 66.667 0.00 0.00 43.88 3.86
4492 12149 3.785859 TGCCATCTCCGCCTGGAC 61.786 66.667 0.00 0.00 40.17 4.02
4493 12150 4.899239 GCCATCTCCGCCTGGACG 62.899 72.222 0.00 0.03 40.17 4.79
4548 12205 3.730761 GGCCGTGAAGCAGCTGTG 61.731 66.667 16.64 0.00 0.00 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 6.723515 TGGACATCCCAAACAAATCAGAATTA 59.276 34.615 0.00 0.00 43.29 1.40
49 50 5.085920 TGGACATCCCAAACAAATCAGAAT 58.914 37.500 0.00 0.00 43.29 2.40
73 76 8.492673 TTCAGGAAATGTACATACATGTCTTC 57.507 34.615 17.76 7.17 45.82 2.87
75 78 7.851228 TCTTCAGGAAATGTACATACATGTCT 58.149 34.615 17.76 8.42 45.82 3.41
87 90 9.606631 GTATGACTAGAATTCTTCAGGAAATGT 57.393 33.333 14.36 0.00 37.49 2.71
90 93 9.823647 GATGTATGACTAGAATTCTTCAGGAAA 57.176 33.333 14.36 0.85 37.49 3.13
113 116 9.695526 TTTTGTGTCTCTTTATGGATTTTGATG 57.304 29.630 0.00 0.00 0.00 3.07
138 141 7.232127 ACACTCTTCATGATGGATTTGTCTTTT 59.768 33.333 8.60 0.00 0.00 2.27
152 155 8.522830 GGGATAAAAATTTGACACTCTTCATGA 58.477 33.333 0.00 0.00 0.00 3.07
307 311 9.168451 TCTGAAAACATCAAAGTTAAGTGTGTA 57.832 29.630 0.33 0.00 37.67 2.90
332 336 2.205074 CAGGTGATACCAATCGCACTC 58.795 52.381 0.28 0.00 43.21 3.51
337 341 4.369182 GAAGTACCAGGTGATACCAATCG 58.631 47.826 0.76 0.00 41.95 3.34
339 343 3.458487 GGGAAGTACCAGGTGATACCAAT 59.542 47.826 0.76 0.00 38.18 3.16
340 344 2.841881 GGGAAGTACCAGGTGATACCAA 59.158 50.000 0.76 0.00 38.18 3.67
343 347 2.169978 GTGGGGAAGTACCAGGTGATAC 59.830 54.545 0.76 0.00 39.00 2.24
353 357 4.353383 AGAAGAACTTGTGGGGAAGTAC 57.647 45.455 0.00 0.00 35.01 2.73
381 385 3.081061 TGAATGGCTTTCACGCATAGTT 58.919 40.909 11.38 0.00 39.44 2.24
433 437 5.187967 AGGGAGAGAAAGACGAACACATATT 59.812 40.000 0.00 0.00 0.00 1.28
436 440 2.900546 AGGGAGAGAAAGACGAACACAT 59.099 45.455 0.00 0.00 0.00 3.21
440 448 3.445805 AGATCAGGGAGAGAAAGACGAAC 59.554 47.826 0.00 0.00 0.00 3.95
444 452 3.636764 GAGGAGATCAGGGAGAGAAAGAC 59.363 52.174 0.00 0.00 0.00 3.01
458 466 1.443828 GGGTGAAGCCGAGGAGATC 59.556 63.158 0.00 0.00 38.44 2.75
464 472 3.003173 TCCAGGGGTGAAGCCGAG 61.003 66.667 0.00 0.00 38.44 4.63
467 475 2.936032 AGGTCCAGGGGTGAAGCC 60.936 66.667 0.00 0.00 0.00 4.35
468 476 2.190488 CTGAGGTCCAGGGGTGAAGC 62.190 65.000 0.00 0.00 39.23 3.86
491 509 2.741092 GTGAAGACGGAGGTGGCA 59.259 61.111 0.00 0.00 0.00 4.92
543 561 0.326048 ATGGAGTCTGGGTGAGGGAG 60.326 60.000 0.00 0.00 0.00 4.30
544 562 0.325671 GATGGAGTCTGGGTGAGGGA 60.326 60.000 0.00 0.00 0.00 4.20
549 567 1.068281 CATCGAGATGGAGTCTGGGTG 59.932 57.143 5.22 0.00 37.43 4.61
557 575 0.031314 CCCGTGACATCGAGATGGAG 59.969 60.000 16.37 5.52 42.91 3.86
666 684 3.914312 GCTCATTAGCTATAACGAGGCA 58.086 45.455 0.00 0.00 45.85 4.75
684 716 1.478622 GCTCAAGCAGATCGTCGCTC 61.479 60.000 7.63 0.00 37.54 5.03
827 873 3.319198 GAGAGTTGGGCCGGGTCA 61.319 66.667 2.18 0.00 0.00 4.02
840 886 0.824109 TGTCCCAGTTATGCCGAGAG 59.176 55.000 0.00 0.00 0.00 3.20
854 900 0.108207 CCAGAGAGCATCCATGTCCC 59.892 60.000 0.00 0.00 33.66 4.46
856 902 3.488778 AATCCAGAGAGCATCCATGTC 57.511 47.619 0.00 0.00 33.66 3.06
901 948 2.834549 ACACTACAAGGTGAGGATGGAG 59.165 50.000 1.52 0.00 40.13 3.86
962 1014 2.590391 CTAGCTCCTGCCTGCTGGTG 62.590 65.000 11.69 12.53 40.08 4.17
963 1015 2.284921 TAGCTCCTGCCTGCTGGT 60.285 61.111 11.69 0.00 40.08 4.00
1126 1179 2.028658 ACACAGTGGTATGTCTCTGCAG 60.029 50.000 7.63 7.63 0.00 4.41
1135 1188 4.261994 CCCCAAAGAAAACACAGTGGTATG 60.262 45.833 5.31 0.00 0.00 2.39
1136 1189 3.895041 CCCCAAAGAAAACACAGTGGTAT 59.105 43.478 5.31 0.00 0.00 2.73
1144 1197 3.822167 TCGGTAATCCCCAAAGAAAACAC 59.178 43.478 0.00 0.00 0.00 3.32
1159 1239 4.415881 TGTCATGCACCTAATCGGTAAT 57.584 40.909 0.00 0.00 46.94 1.89
1163 1243 1.875514 CCATGTCATGCACCTAATCGG 59.124 52.381 7.35 0.00 39.35 4.18
1174 1254 1.739466 CTTGGGAACGACCATGTCATG 59.261 52.381 5.79 5.79 40.91 3.07
1178 1258 0.250727 CCACTTGGGAACGACCATGT 60.251 55.000 9.84 9.84 46.29 3.21
1200 1280 4.262463 CCGGATTCATAGGAAAAGGATCGA 60.262 45.833 0.00 0.00 36.43 3.59
1206 1286 5.031066 TGTACCCGGATTCATAGGAAAAG 57.969 43.478 0.73 0.00 36.43 2.27
1207 1287 5.438698 TTGTACCCGGATTCATAGGAAAA 57.561 39.130 0.73 0.00 36.43 2.29
1225 1308 4.119862 GACTAAAGCAGCGATGGATTGTA 58.880 43.478 1.46 0.00 0.00 2.41
1237 1320 3.971245 AGACCTTCTGGACTAAAGCAG 57.029 47.619 0.00 0.00 36.63 4.24
1250 1333 2.879103 TCATCCCCACAAAGACCTTC 57.121 50.000 0.00 0.00 0.00 3.46
1317 1405 6.512297 ACCAACATTTCCACAAGTCAAATAC 58.488 36.000 0.00 0.00 0.00 1.89
1412 1503 1.203187 TCTGCCTACTCCAACTCTGGT 60.203 52.381 0.00 0.00 43.97 4.00
1472 1567 4.589908 AGACTGTTTTGTACATCCATCCC 58.410 43.478 0.00 0.00 35.85 3.85
1476 1571 5.242171 TCGAGTAGACTGTTTTGTACATCCA 59.758 40.000 0.00 0.00 35.85 3.41
1477 1572 5.706916 TCGAGTAGACTGTTTTGTACATCC 58.293 41.667 0.00 0.00 35.85 3.51
1478 1573 7.027760 TGATCGAGTAGACTGTTTTGTACATC 58.972 38.462 0.00 0.00 35.85 3.06
1479 1574 6.920817 TGATCGAGTAGACTGTTTTGTACAT 58.079 36.000 0.00 0.00 35.85 2.29
1480 1575 6.321848 TGATCGAGTAGACTGTTTTGTACA 57.678 37.500 0.00 0.00 34.95 2.90
1481 1576 6.089150 GGTTGATCGAGTAGACTGTTTTGTAC 59.911 42.308 0.00 0.00 0.00 2.90
1482 1577 6.154445 GGTTGATCGAGTAGACTGTTTTGTA 58.846 40.000 0.00 0.00 0.00 2.41
1483 1578 4.989168 GGTTGATCGAGTAGACTGTTTTGT 59.011 41.667 0.00 0.00 0.00 2.83
1484 1579 4.389077 GGGTTGATCGAGTAGACTGTTTTG 59.611 45.833 0.00 0.00 0.00 2.44
1485 1580 4.039973 TGGGTTGATCGAGTAGACTGTTTT 59.960 41.667 0.00 0.00 0.00 2.43
1486 1581 3.576982 TGGGTTGATCGAGTAGACTGTTT 59.423 43.478 0.00 0.00 0.00 2.83
1487 1582 3.162666 TGGGTTGATCGAGTAGACTGTT 58.837 45.455 0.00 0.00 0.00 3.16
1488 1583 2.803956 TGGGTTGATCGAGTAGACTGT 58.196 47.619 0.00 0.00 0.00 3.55
1489 1584 3.868757 TTGGGTTGATCGAGTAGACTG 57.131 47.619 0.00 0.00 0.00 3.51
1490 1585 4.527038 TCTTTTGGGTTGATCGAGTAGACT 59.473 41.667 0.00 0.00 0.00 3.24
1491 1586 4.817517 TCTTTTGGGTTGATCGAGTAGAC 58.182 43.478 0.00 0.00 0.00 2.59
1492 1587 5.677319 ATCTTTTGGGTTGATCGAGTAGA 57.323 39.130 0.00 0.00 0.00 2.59
1493 1588 9.712305 ATAATATCTTTTGGGTTGATCGAGTAG 57.288 33.333 0.00 0.00 0.00 2.57
1528 1623 4.109766 GGCGGTTGTATTTAAGCAATTCC 58.890 43.478 0.00 0.00 0.00 3.01
1530 1625 4.219725 ACTGGCGGTTGTATTTAAGCAATT 59.780 37.500 0.00 0.00 0.00 2.32
1544 1639 2.113243 GAGTCCTCCAACTGGCGGTT 62.113 60.000 5.72 5.72 40.87 4.44
1556 1651 7.208225 AGAAATGCTTTAAACTTGAGTCCTC 57.792 36.000 0.00 0.00 0.00 3.71
1605 1700 9.825972 GAGAAGAACAATGAAATAACGATGAAA 57.174 29.630 0.00 0.00 0.00 2.69
1607 1702 7.606073 TGGAGAAGAACAATGAAATAACGATGA 59.394 33.333 0.00 0.00 0.00 2.92
1608 1703 7.751732 TGGAGAAGAACAATGAAATAACGATG 58.248 34.615 0.00 0.00 0.00 3.84
1609 1704 7.921786 TGGAGAAGAACAATGAAATAACGAT 57.078 32.000 0.00 0.00 0.00 3.73
1616 1711 8.742777 CCTTCATTATGGAGAAGAACAATGAAA 58.257 33.333 1.31 0.00 42.95 2.69
1617 1712 7.148018 GCCTTCATTATGGAGAAGAACAATGAA 60.148 37.037 1.31 7.18 42.95 2.57
1618 1713 6.319658 GCCTTCATTATGGAGAAGAACAATGA 59.680 38.462 1.31 0.00 42.95 2.57
1619 1714 6.501781 GCCTTCATTATGGAGAAGAACAATG 58.498 40.000 1.31 0.00 42.95 2.82
1620 1715 5.297776 CGCCTTCATTATGGAGAAGAACAAT 59.702 40.000 1.31 0.00 42.95 2.71
1621 1716 4.635765 CGCCTTCATTATGGAGAAGAACAA 59.364 41.667 1.31 0.00 42.95 2.83
1622 1717 4.191544 CGCCTTCATTATGGAGAAGAACA 58.808 43.478 1.31 0.00 42.95 3.18
1623 1718 4.034510 CACGCCTTCATTATGGAGAAGAAC 59.965 45.833 1.31 0.00 42.95 3.01
1624 1719 4.191544 CACGCCTTCATTATGGAGAAGAA 58.808 43.478 1.31 0.00 42.95 2.52
1814 1909 7.725397 TCAATGGTGCCATAGCTAGAAATATTT 59.275 33.333 3.90 0.00 40.80 1.40
1819 1914 4.502105 TCAATGGTGCCATAGCTAGAAA 57.498 40.909 3.90 0.00 40.80 2.52
1875 2038 6.603940 ATCTCTTCTGCTAATAGGGATCAC 57.396 41.667 0.00 0.00 0.00 3.06
1910 2073 8.606754 ATCCTGATATCACTGTAATGCTCTAT 57.393 34.615 0.00 0.00 0.00 1.98
2010 2173 3.065233 TCCGCAGTGATCATAATTGCAAC 59.935 43.478 18.25 0.00 34.56 4.17
2024 2187 0.035458 AGAAAGGGAACTCCGCAGTG 59.965 55.000 0.00 0.00 42.68 3.66
2085 2248 7.099764 TCTACAAGATGATCACAAGAAGAACC 58.900 38.462 0.00 0.00 0.00 3.62
2316 2479 8.217799 TCCTTTTCAGATCTTGAGGTAAAAGAA 58.782 33.333 15.09 2.79 37.22 2.52
2364 4653 4.380444 GCAAACAACTCCTGACAAAAGTCA 60.380 41.667 0.00 0.00 0.00 3.41
2365 4654 4.105486 GCAAACAACTCCTGACAAAAGTC 58.895 43.478 0.00 0.00 0.00 3.01
2366 4655 3.427503 CGCAAACAACTCCTGACAAAAGT 60.428 43.478 0.00 0.00 0.00 2.66
2367 4656 3.108144 CGCAAACAACTCCTGACAAAAG 58.892 45.455 0.00 0.00 0.00 2.27
2381 4670 5.353938 AGAGTTAAAGTCAGTACGCAAACA 58.646 37.500 0.00 0.00 0.00 2.83
2488 4778 5.649557 GGTGCAAACATAGCATTATGAACA 58.350 37.500 0.00 0.00 44.79 3.18
2494 4784 5.820423 AGTATTCGGTGCAAACATAGCATTA 59.180 36.000 0.00 0.00 44.79 1.90
2710 5001 3.548818 CCAAACAACAGCTGAGTGTAAGC 60.549 47.826 23.35 0.00 41.15 3.09
2734 5025 6.231365 CGCTAGTATTGTAGAACAACGTTTG 58.769 40.000 0.00 0.00 41.40 2.93
2755 5046 3.574614 GTTGTGTTTGGAATATTGCGCT 58.425 40.909 9.73 0.00 0.00 5.92
2926 5302 5.704053 CACCCTTCGTTATGGTAAACTTTCT 59.296 40.000 0.00 0.00 0.00 2.52
3284 5767 1.457823 AACACGTCCGCCTGTACAGA 61.458 55.000 24.68 0.93 0.00 3.41
3561 6054 3.806625 AACAGCTGCATTTTTCACTGT 57.193 38.095 15.27 0.00 39.92 3.55
3589 6082 9.925268 CAGAGTTTTATTACAAAGTACAAACGT 57.075 29.630 0.00 0.00 0.00 3.99
3646 11275 3.919216 TCTACAAGACAAGAGCAAGCTC 58.081 45.455 14.00 14.00 43.03 4.09
3653 11282 9.482627 AACTAATTCACTTCTACAAGACAAGAG 57.517 33.333 0.00 0.00 33.34 2.85
3654 11283 9.261180 CAACTAATTCACTTCTACAAGACAAGA 57.739 33.333 0.00 0.00 33.34 3.02
3655 11284 9.261180 TCAACTAATTCACTTCTACAAGACAAG 57.739 33.333 0.00 0.00 33.34 3.16
3656 11285 9.261180 CTCAACTAATTCACTTCTACAAGACAA 57.739 33.333 0.00 0.00 33.34 3.18
3657 11286 8.638873 TCTCAACTAATTCACTTCTACAAGACA 58.361 33.333 0.00 0.00 33.34 3.41
3708 11337 5.277058 CCTGAAGTGCAGCGTAATATTCTTC 60.277 44.000 0.00 0.00 43.50 2.87
3717 11347 2.683968 CTTTACCTGAAGTGCAGCGTA 58.316 47.619 0.00 0.00 43.50 4.42
3755 11406 4.541973 TTACTCATGAGCACACTGACAT 57.458 40.909 22.83 1.52 0.00 3.06
3757 11408 6.968131 TTTATTACTCATGAGCACACTGAC 57.032 37.500 22.83 0.00 0.00 3.51
3837 11494 3.197790 CTGGTTGGGCTCGATGCG 61.198 66.667 0.00 0.00 44.05 4.73
3839 11496 2.825836 GGCTGGTTGGGCTCGATG 60.826 66.667 0.00 0.00 0.00 3.84
3859 11516 3.615536 AAAAGATGCTGCACCGCGC 62.616 57.895 3.57 0.00 42.89 6.86
3860 11517 1.512734 GAAAAGATGCTGCACCGCG 60.513 57.895 3.57 0.00 0.00 6.46
3861 11518 1.512734 CGAAAAGATGCTGCACCGC 60.513 57.895 3.57 0.00 0.00 5.68
3862 11519 1.135315 CCGAAAAGATGCTGCACCG 59.865 57.895 3.57 2.14 0.00 4.94
3863 11520 0.169009 GTCCGAAAAGATGCTGCACC 59.831 55.000 3.57 0.00 0.00 5.01
3864 11521 0.169009 GGTCCGAAAAGATGCTGCAC 59.831 55.000 3.57 0.00 0.00 4.57
3865 11522 0.036732 AGGTCCGAAAAGATGCTGCA 59.963 50.000 4.13 4.13 0.00 4.41
3868 11525 0.608640 ACGAGGTCCGAAAAGATGCT 59.391 50.000 0.00 0.00 41.76 3.79
3869 11526 1.128692 CAACGAGGTCCGAAAAGATGC 59.871 52.381 0.00 0.00 41.76 3.91
3870 11527 2.413837 ACAACGAGGTCCGAAAAGATG 58.586 47.619 0.00 0.00 41.76 2.90
3871 11528 2.833631 ACAACGAGGTCCGAAAAGAT 57.166 45.000 0.00 0.00 41.76 2.40
3873 11530 2.286772 CCAAACAACGAGGTCCGAAAAG 60.287 50.000 0.00 0.00 41.76 2.27
3875 11532 1.301423 CCAAACAACGAGGTCCGAAA 58.699 50.000 0.00 0.00 41.76 3.46
3877 11534 0.178533 AACCAAACAACGAGGTCCGA 59.821 50.000 0.00 0.00 41.76 4.55
3878 11535 1.003223 GAAACCAAACAACGAGGTCCG 60.003 52.381 0.00 0.00 45.44 4.79
3880 11537 2.033151 CGAGAAACCAAACAACGAGGTC 60.033 50.000 0.00 0.00 33.74 3.85
3881 11538 1.937899 CGAGAAACCAAACAACGAGGT 59.062 47.619 0.00 0.00 37.20 3.85
3883 11540 1.329292 TGCGAGAAACCAAACAACGAG 59.671 47.619 0.00 0.00 0.00 4.18
3884 11541 1.370609 TGCGAGAAACCAAACAACGA 58.629 45.000 0.00 0.00 0.00 3.85
3885 11542 2.399396 ATGCGAGAAACCAAACAACG 57.601 45.000 0.00 0.00 0.00 4.10
3886 11543 3.972502 GTGTATGCGAGAAACCAAACAAC 59.027 43.478 0.00 0.00 0.00 3.32
3887 11544 3.880490 AGTGTATGCGAGAAACCAAACAA 59.120 39.130 0.00 0.00 0.00 2.83
3888 11545 3.249799 CAGTGTATGCGAGAAACCAAACA 59.750 43.478 0.00 0.00 0.00 2.83
3889 11546 3.250040 ACAGTGTATGCGAGAAACCAAAC 59.750 43.478 0.00 0.00 0.00 2.93
3890 11547 3.472652 ACAGTGTATGCGAGAAACCAAA 58.527 40.909 0.00 0.00 0.00 3.28
3891 11548 3.120321 ACAGTGTATGCGAGAAACCAA 57.880 42.857 0.00 0.00 0.00 3.67
3892 11549 2.805671 CAACAGTGTATGCGAGAAACCA 59.194 45.455 0.00 0.00 0.00 3.67
3893 11550 3.064207 TCAACAGTGTATGCGAGAAACC 58.936 45.455 0.00 0.00 0.00 3.27
3894 11551 3.423645 GCTCAACAGTGTATGCGAGAAAC 60.424 47.826 13.27 0.00 34.94 2.78
3896 11553 2.337583 GCTCAACAGTGTATGCGAGAA 58.662 47.619 13.27 0.00 34.94 2.87
3898 11555 1.002366 GGCTCAACAGTGTATGCGAG 58.998 55.000 0.00 1.98 35.70 5.03
3899 11556 0.608130 AGGCTCAACAGTGTATGCGA 59.392 50.000 0.00 0.00 0.00 5.10
3900 11557 0.723414 CAGGCTCAACAGTGTATGCG 59.277 55.000 0.00 0.00 0.00 4.73
3901 11558 0.449388 GCAGGCTCAACAGTGTATGC 59.551 55.000 0.00 1.16 0.00 3.14
3902 11559 1.812235 TGCAGGCTCAACAGTGTATG 58.188 50.000 0.00 0.00 0.00 2.39
3907 11564 2.154462 GTGTTATGCAGGCTCAACAGT 58.846 47.619 10.19 0.00 31.92 3.55
3908 11565 1.129251 CGTGTTATGCAGGCTCAACAG 59.871 52.381 10.19 3.97 31.92 3.16
3909 11566 1.155889 CGTGTTATGCAGGCTCAACA 58.844 50.000 0.00 7.01 0.00 3.33
3911 11568 0.036164 ACCGTGTTATGCAGGCTCAA 59.964 50.000 0.00 0.00 0.00 3.02
3912 11569 0.036164 AACCGTGTTATGCAGGCTCA 59.964 50.000 0.00 0.00 0.00 4.26
3914 11571 0.324943 AGAACCGTGTTATGCAGGCT 59.675 50.000 0.00 0.00 0.00 4.58
3915 11572 1.165270 AAGAACCGTGTTATGCAGGC 58.835 50.000 0.00 0.00 0.00 4.85
3918 11575 4.276183 TGCTTTTAAGAACCGTGTTATGCA 59.724 37.500 0.00 0.00 0.00 3.96
3919 11576 4.615541 GTGCTTTTAAGAACCGTGTTATGC 59.384 41.667 0.00 0.00 0.00 3.14
3920 11577 5.151389 GGTGCTTTTAAGAACCGTGTTATG 58.849 41.667 3.90 0.00 44.60 1.90
3921 11578 5.366829 GGTGCTTTTAAGAACCGTGTTAT 57.633 39.130 3.90 0.00 44.60 1.89
3922 11579 4.816786 GGTGCTTTTAAGAACCGTGTTA 57.183 40.909 3.90 0.00 44.60 2.41
3923 11580 3.703286 GGTGCTTTTAAGAACCGTGTT 57.297 42.857 3.90 0.00 44.60 3.32
3929 11586 1.893137 CCCAGGGGTGCTTTTAAGAAC 59.107 52.381 0.00 0.00 33.56 3.01
3930 11587 1.825641 GCCCAGGGGTGCTTTTAAGAA 60.826 52.381 7.91 0.00 37.65 2.52
3931 11588 0.251608 GCCCAGGGGTGCTTTTAAGA 60.252 55.000 7.91 0.00 37.65 2.10
3932 11589 1.257750 GGCCCAGGGGTGCTTTTAAG 61.258 60.000 7.91 0.00 37.65 1.85
3933 11590 1.229051 GGCCCAGGGGTGCTTTTAA 60.229 57.895 7.91 0.00 37.65 1.52
3934 11591 2.167037 AGGCCCAGGGGTGCTTTTA 61.167 57.895 7.91 0.00 37.65 1.52
3935 11592 3.521452 AGGCCCAGGGGTGCTTTT 61.521 61.111 7.91 0.00 37.65 2.27
3936 11593 4.305956 CAGGCCCAGGGGTGCTTT 62.306 66.667 7.91 0.00 37.65 3.51
3958 11615 2.746803 CGATTCGGCCGTTCCCAAC 61.747 63.158 27.15 9.73 0.00 3.77
3959 11616 2.435234 CGATTCGGCCGTTCCCAA 60.435 61.111 27.15 12.35 0.00 4.12
3960 11617 4.460683 CCGATTCGGCCGTTCCCA 62.461 66.667 27.15 1.01 41.17 4.37
3976 11633 2.436824 GGCTCTCGGGAAACTGCC 60.437 66.667 0.00 0.00 36.33 4.85
3977 11634 1.743252 CTGGCTCTCGGGAAACTGC 60.743 63.158 0.00 0.00 36.33 4.40
3978 11635 1.078848 CCTGGCTCTCGGGAAACTG 60.079 63.158 0.00 0.00 44.90 3.16
3979 11636 2.960688 GCCTGGCTCTCGGGAAACT 61.961 63.158 12.43 0.00 44.90 2.66
3980 11637 2.436824 GCCTGGCTCTCGGGAAAC 60.437 66.667 12.43 0.00 44.90 2.78
3981 11638 2.607750 AGCCTGGCTCTCGGGAAA 60.608 61.111 17.22 0.00 44.90 3.13
3990 11647 3.160047 CATCCCTCGAGCCTGGCT 61.160 66.667 23.64 23.64 43.88 4.75
3991 11648 4.925861 GCATCCCTCGAGCCTGGC 62.926 72.222 11.65 11.65 0.00 4.85
3992 11649 2.657102 GAAGCATCCCTCGAGCCTGG 62.657 65.000 6.99 3.05 0.00 4.45
3993 11650 1.227497 GAAGCATCCCTCGAGCCTG 60.227 63.158 6.99 4.86 0.00 4.85
3994 11651 2.790791 CGAAGCATCCCTCGAGCCT 61.791 63.158 6.99 0.00 0.00 4.58
3995 11652 2.279784 CGAAGCATCCCTCGAGCC 60.280 66.667 6.99 0.00 0.00 4.70
3996 11653 1.299773 CTCGAAGCATCCCTCGAGC 60.300 63.158 6.99 0.00 43.98 5.03
3998 11655 2.786495 GCCTCGAAGCATCCCTCGA 61.786 63.158 0.00 0.00 0.00 4.04
3999 11656 2.279784 GCCTCGAAGCATCCCTCG 60.280 66.667 0.00 0.00 0.00 4.63
4000 11657 2.279784 CGCCTCGAAGCATCCCTC 60.280 66.667 6.84 0.00 0.00 4.30
4001 11658 4.537433 GCGCCTCGAAGCATCCCT 62.537 66.667 6.84 0.00 0.00 4.20
4002 11659 4.838152 TGCGCCTCGAAGCATCCC 62.838 66.667 4.18 0.00 38.59 3.85
4007 11664 3.869272 CCACATGCGCCTCGAAGC 61.869 66.667 4.18 0.00 0.00 3.86
4008 11665 3.197790 CCCACATGCGCCTCGAAG 61.198 66.667 4.18 0.00 0.00 3.79
4009 11666 4.015406 ACCCACATGCGCCTCGAA 62.015 61.111 4.18 0.00 0.00 3.71
4010 11667 4.758251 CACCCACATGCGCCTCGA 62.758 66.667 4.18 0.00 0.00 4.04
4016 11673 2.821366 GAGAGCCACCCACATGCG 60.821 66.667 0.00 0.00 0.00 4.73
4017 11674 1.748122 CAGAGAGCCACCCACATGC 60.748 63.158 0.00 0.00 0.00 4.06
4018 11675 1.077930 CCAGAGAGCCACCCACATG 60.078 63.158 0.00 0.00 0.00 3.21
4019 11676 1.229625 TCCAGAGAGCCACCCACAT 60.230 57.895 0.00 0.00 0.00 3.21
4020 11677 1.915266 CTCCAGAGAGCCACCCACA 60.915 63.158 0.00 0.00 32.13 4.17
4021 11678 1.610673 TCTCCAGAGAGCCACCCAC 60.611 63.158 0.00 0.00 40.22 4.61
4022 11679 1.610673 GTCTCCAGAGAGCCACCCA 60.611 63.158 0.00 0.00 40.22 4.51
4023 11680 2.716017 CGTCTCCAGAGAGCCACCC 61.716 68.421 0.00 0.00 40.22 4.61
4024 11681 1.979693 ACGTCTCCAGAGAGCCACC 60.980 63.158 0.00 0.00 40.22 4.61
4025 11682 1.214062 CACGTCTCCAGAGAGCCAC 59.786 63.158 0.00 0.00 40.22 5.01
4026 11683 1.228583 ACACGTCTCCAGAGAGCCA 60.229 57.895 0.00 0.00 40.22 4.75
4027 11684 1.214062 CACACGTCTCCAGAGAGCC 59.786 63.158 0.00 0.00 40.22 4.70
4028 11685 0.109504 GACACACGTCTCCAGAGAGC 60.110 60.000 0.00 0.00 40.22 4.09
4038 11695 3.169733 GGATTAACTCGAGACACACGTC 58.830 50.000 21.68 7.30 42.95 4.34
4039 11696 2.094854 GGGATTAACTCGAGACACACGT 60.095 50.000 21.68 0.00 0.00 4.49
4040 11697 2.163815 AGGGATTAACTCGAGACACACG 59.836 50.000 21.68 0.00 0.00 4.49
4041 11698 3.444388 AGAGGGATTAACTCGAGACACAC 59.556 47.826 21.68 6.71 39.90 3.82
4042 11699 3.695060 GAGAGGGATTAACTCGAGACACA 59.305 47.826 21.68 0.00 39.90 3.72
4043 11700 3.949113 AGAGAGGGATTAACTCGAGACAC 59.051 47.826 21.68 6.00 39.90 3.67
4044 11701 4.080243 AGAGAGAGGGATTAACTCGAGACA 60.080 45.833 21.68 2.66 39.90 3.41
4045 11702 4.457466 AGAGAGAGGGATTAACTCGAGAC 58.543 47.826 21.68 4.75 39.90 3.36
4046 11703 4.410883 AGAGAGAGAGGGATTAACTCGAGA 59.589 45.833 21.68 0.00 39.90 4.04
4047 11704 4.714632 AGAGAGAGAGGGATTAACTCGAG 58.285 47.826 11.84 11.84 39.90 4.04
4048 11705 4.445162 GGAGAGAGAGAGGGATTAACTCGA 60.445 50.000 0.00 0.00 39.90 4.04
4049 11706 3.818773 GGAGAGAGAGAGGGATTAACTCG 59.181 52.174 0.00 0.00 39.90 4.18
4050 11707 4.141018 AGGGAGAGAGAGAGGGATTAACTC 60.141 50.000 0.00 0.00 35.20 3.01
4051 11708 3.797269 AGGGAGAGAGAGAGGGATTAACT 59.203 47.826 0.00 0.00 0.00 2.24
4052 11709 4.193240 AGGGAGAGAGAGAGGGATTAAC 57.807 50.000 0.00 0.00 0.00 2.01
4053 11710 6.469533 GGATTAGGGAGAGAGAGAGGGATTAA 60.470 46.154 0.00 0.00 0.00 1.40
4054 11711 5.015817 GGATTAGGGAGAGAGAGAGGGATTA 59.984 48.000 0.00 0.00 0.00 1.75
4055 11712 4.202781 GGATTAGGGAGAGAGAGAGGGATT 60.203 50.000 0.00 0.00 0.00 3.01
4056 11713 3.336694 GGATTAGGGAGAGAGAGAGGGAT 59.663 52.174 0.00 0.00 0.00 3.85
4057 11714 2.719705 GGATTAGGGAGAGAGAGAGGGA 59.280 54.545 0.00 0.00 0.00 4.20
4058 11715 2.721906 AGGATTAGGGAGAGAGAGAGGG 59.278 54.545 0.00 0.00 0.00 4.30
4059 11716 3.397618 TGAGGATTAGGGAGAGAGAGAGG 59.602 52.174 0.00 0.00 0.00 3.69
4060 11717 4.722526 TGAGGATTAGGGAGAGAGAGAG 57.277 50.000 0.00 0.00 0.00 3.20
4061 11718 5.458948 GGATTGAGGATTAGGGAGAGAGAGA 60.459 48.000 0.00 0.00 0.00 3.10
4062 11719 4.772100 GGATTGAGGATTAGGGAGAGAGAG 59.228 50.000 0.00 0.00 0.00 3.20
4063 11720 4.449968 GGGATTGAGGATTAGGGAGAGAGA 60.450 50.000 0.00 0.00 0.00 3.10
4064 11721 3.837731 GGGATTGAGGATTAGGGAGAGAG 59.162 52.174 0.00 0.00 0.00 3.20
4065 11722 3.440154 GGGGATTGAGGATTAGGGAGAGA 60.440 52.174 0.00 0.00 0.00 3.10
4066 11723 2.909662 GGGGATTGAGGATTAGGGAGAG 59.090 54.545 0.00 0.00 0.00 3.20
4067 11724 2.528813 AGGGGATTGAGGATTAGGGAGA 59.471 50.000 0.00 0.00 0.00 3.71
4068 11725 2.909662 GAGGGGATTGAGGATTAGGGAG 59.090 54.545 0.00 0.00 0.00 4.30
4069 11726 2.528813 AGAGGGGATTGAGGATTAGGGA 59.471 50.000 0.00 0.00 0.00 4.20
4070 11727 2.909662 GAGAGGGGATTGAGGATTAGGG 59.090 54.545 0.00 0.00 0.00 3.53
4071 11728 3.837731 GAGAGAGGGGATTGAGGATTAGG 59.162 52.174 0.00 0.00 0.00 2.69
4072 11729 4.750941 AGAGAGAGGGGATTGAGGATTAG 58.249 47.826 0.00 0.00 0.00 1.73
4073 11730 4.449968 GGAGAGAGAGGGGATTGAGGATTA 60.450 50.000 0.00 0.00 0.00 1.75
4074 11731 3.586429 GAGAGAGAGGGGATTGAGGATT 58.414 50.000 0.00 0.00 0.00 3.01
4075 11732 2.158173 GGAGAGAGAGGGGATTGAGGAT 60.158 54.545 0.00 0.00 0.00 3.24
4076 11733 1.219213 GGAGAGAGAGGGGATTGAGGA 59.781 57.143 0.00 0.00 0.00 3.71
4077 11734 1.715785 GGAGAGAGAGGGGATTGAGG 58.284 60.000 0.00 0.00 0.00 3.86
4078 11735 1.220236 AGGGAGAGAGAGGGGATTGAG 59.780 57.143 0.00 0.00 0.00 3.02
4079 11736 1.219213 GAGGGAGAGAGAGGGGATTGA 59.781 57.143 0.00 0.00 0.00 2.57
4080 11737 1.220236 AGAGGGAGAGAGAGGGGATTG 59.780 57.143 0.00 0.00 0.00 2.67
4081 11738 1.631536 AGAGGGAGAGAGAGGGGATT 58.368 55.000 0.00 0.00 0.00 3.01
4082 11739 2.070573 GTAGAGGGAGAGAGAGGGGAT 58.929 57.143 0.00 0.00 0.00 3.85
4083 11740 1.011545 AGTAGAGGGAGAGAGAGGGGA 59.988 57.143 0.00 0.00 0.00 4.81
4084 11741 1.423921 GAGTAGAGGGAGAGAGAGGGG 59.576 61.905 0.00 0.00 0.00 4.79
4085 11742 1.423921 GGAGTAGAGGGAGAGAGAGGG 59.576 61.905 0.00 0.00 0.00 4.30
4086 11743 2.106511 CTGGAGTAGAGGGAGAGAGAGG 59.893 59.091 0.00 0.00 0.00 3.69
4087 11744 2.777692 ACTGGAGTAGAGGGAGAGAGAG 59.222 54.545 0.00 0.00 0.00 3.20
4088 11745 2.507886 CACTGGAGTAGAGGGAGAGAGA 59.492 54.545 0.00 0.00 0.00 3.10
4089 11746 2.930950 CACTGGAGTAGAGGGAGAGAG 58.069 57.143 0.00 0.00 0.00 3.20
4090 11747 1.064314 GCACTGGAGTAGAGGGAGAGA 60.064 57.143 0.00 0.00 0.00 3.10
4091 11748 1.398692 GCACTGGAGTAGAGGGAGAG 58.601 60.000 0.00 0.00 0.00 3.20
4092 11749 0.394488 CGCACTGGAGTAGAGGGAGA 60.394 60.000 0.00 0.00 32.85 3.71
4093 11750 0.394488 TCGCACTGGAGTAGAGGGAG 60.394 60.000 0.00 0.00 34.83 4.30
4094 11751 0.259065 ATCGCACTGGAGTAGAGGGA 59.741 55.000 0.00 0.00 41.64 4.20
4095 11752 0.671251 GATCGCACTGGAGTAGAGGG 59.329 60.000 0.00 0.00 0.00 4.30
4096 11753 0.671251 GGATCGCACTGGAGTAGAGG 59.329 60.000 0.00 0.00 0.00 3.69
4097 11754 0.671251 GGGATCGCACTGGAGTAGAG 59.329 60.000 4.64 0.00 0.00 2.43
4098 11755 1.101635 CGGGATCGCACTGGAGTAGA 61.102 60.000 10.70 0.00 0.00 2.59
4099 11756 1.360551 CGGGATCGCACTGGAGTAG 59.639 63.158 10.70 0.00 0.00 2.57
4100 11757 1.379443 ACGGGATCGCACTGGAGTA 60.379 57.895 10.70 0.00 40.63 2.59
4101 11758 2.680352 ACGGGATCGCACTGGAGT 60.680 61.111 10.70 0.00 40.63 3.85
4102 11759 2.105128 GACGGGATCGCACTGGAG 59.895 66.667 10.70 0.00 40.63 3.86
4103 11760 3.822192 CGACGGGATCGCACTGGA 61.822 66.667 10.70 0.00 45.52 3.86
4112 11769 2.910994 GGACGGGATCGACGGGAT 60.911 66.667 12.19 0.00 40.11 3.85
4117 11774 3.912907 ATGGCGGACGGGATCGAC 61.913 66.667 0.00 0.00 40.11 4.20
4118 11775 3.911698 CATGGCGGACGGGATCGA 61.912 66.667 0.00 0.00 40.11 3.59
4119 11776 4.969196 CCATGGCGGACGGGATCG 62.969 72.222 0.00 0.00 43.02 3.69
4120 11777 2.996168 CTTCCATGGCGGACGGGATC 62.996 65.000 6.96 0.00 46.36 3.36
4121 11778 3.087253 TTCCATGGCGGACGGGAT 61.087 61.111 6.96 0.00 46.36 3.85
4122 11779 3.781307 CTTCCATGGCGGACGGGA 61.781 66.667 6.96 0.00 46.36 5.14
4124 11781 4.776322 TGCTTCCATGGCGGACGG 62.776 66.667 6.96 0.00 46.36 4.79
4125 11782 3.197790 CTGCTTCCATGGCGGACG 61.198 66.667 6.96 0.00 46.36 4.79
4126 11783 2.825836 CCTGCTTCCATGGCGGAC 60.826 66.667 6.96 0.00 46.36 4.79
4127 11784 4.113815 CCCTGCTTCCATGGCGGA 62.114 66.667 6.96 0.45 44.40 5.54
4129 11786 4.113815 TCCCCTGCTTCCATGGCG 62.114 66.667 6.96 1.19 0.00 5.69
4130 11787 2.123982 CTCCCCTGCTTCCATGGC 60.124 66.667 6.96 0.00 0.00 4.40
4131 11788 2.123982 GCTCCCCTGCTTCCATGG 60.124 66.667 4.97 4.97 0.00 3.66
4132 11789 2.515523 CGCTCCCCTGCTTCCATG 60.516 66.667 0.00 0.00 0.00 3.66
4133 11790 3.801997 CCGCTCCCCTGCTTCCAT 61.802 66.667 0.00 0.00 0.00 3.41
4135 11792 3.468326 GATCCGCTCCCCTGCTTCC 62.468 68.421 0.00 0.00 0.00 3.46
4136 11793 2.110006 GATCCGCTCCCCTGCTTC 59.890 66.667 0.00 0.00 0.00 3.86
4137 11794 3.483869 GGATCCGCTCCCCTGCTT 61.484 66.667 0.00 0.00 38.19 3.91
4138 11795 4.804420 TGGATCCGCTCCCCTGCT 62.804 66.667 7.39 0.00 44.23 4.24
4139 11796 3.797353 TTGGATCCGCTCCCCTGC 61.797 66.667 7.39 0.00 44.23 4.85
4140 11797 2.190578 GTTGGATCCGCTCCCCTG 59.809 66.667 7.39 0.00 44.23 4.45
4141 11798 2.285368 TGTTGGATCCGCTCCCCT 60.285 61.111 7.39 0.00 44.23 4.79
4142 11799 2.124695 GTGTTGGATCCGCTCCCC 60.125 66.667 7.39 0.00 44.23 4.81
4143 11800 2.124695 GGTGTTGGATCCGCTCCC 60.125 66.667 7.39 0.71 44.23 4.30
4144 11801 1.153349 GAGGTGTTGGATCCGCTCC 60.153 63.158 7.39 12.44 45.19 4.70
4145 11802 1.519455 CGAGGTGTTGGATCCGCTC 60.519 63.158 7.39 3.59 0.00 5.03
4146 11803 0.968901 TACGAGGTGTTGGATCCGCT 60.969 55.000 7.39 0.00 0.00 5.52
4147 11804 0.527817 CTACGAGGTGTTGGATCCGC 60.528 60.000 7.39 3.05 0.00 5.54
4148 11805 1.065701 CTCTACGAGGTGTTGGATCCG 59.934 57.143 7.39 0.00 0.00 4.18
4149 11806 1.202428 GCTCTACGAGGTGTTGGATCC 60.202 57.143 4.20 4.20 0.00 3.36
4150 11807 2.211353 GCTCTACGAGGTGTTGGATC 57.789 55.000 0.00 0.00 0.00 3.36
4162 11819 3.304123 CCTCTACTTTGATCCGCTCTACG 60.304 52.174 0.00 0.00 43.15 3.51
4163 11820 3.004944 CCCTCTACTTTGATCCGCTCTAC 59.995 52.174 0.00 0.00 0.00 2.59
4164 11821 3.223435 CCCTCTACTTTGATCCGCTCTA 58.777 50.000 0.00 0.00 0.00 2.43
4165 11822 2.035632 CCCTCTACTTTGATCCGCTCT 58.964 52.381 0.00 0.00 0.00 4.09
4166 11823 1.069358 CCCCTCTACTTTGATCCGCTC 59.931 57.143 0.00 0.00 0.00 5.03
4167 11824 1.123928 CCCCTCTACTTTGATCCGCT 58.876 55.000 0.00 0.00 0.00 5.52
4168 11825 0.533085 GCCCCTCTACTTTGATCCGC 60.533 60.000 0.00 0.00 0.00 5.54
4169 11826 0.249489 CGCCCCTCTACTTTGATCCG 60.249 60.000 0.00 0.00 0.00 4.18
4170 11827 0.106894 CCGCCCCTCTACTTTGATCC 59.893 60.000 0.00 0.00 0.00 3.36
4171 11828 1.120530 TCCGCCCCTCTACTTTGATC 58.879 55.000 0.00 0.00 0.00 2.92
4172 11829 1.486726 CTTCCGCCCCTCTACTTTGAT 59.513 52.381 0.00 0.00 0.00 2.57
4173 11830 0.902531 CTTCCGCCCCTCTACTTTGA 59.097 55.000 0.00 0.00 0.00 2.69
4174 11831 0.107654 CCTTCCGCCCCTCTACTTTG 60.108 60.000 0.00 0.00 0.00 2.77
4175 11832 1.911702 GCCTTCCGCCCCTCTACTTT 61.912 60.000 0.00 0.00 0.00 2.66
4176 11833 2.368011 GCCTTCCGCCCCTCTACTT 61.368 63.158 0.00 0.00 0.00 2.24
4177 11834 2.764547 GCCTTCCGCCCCTCTACT 60.765 66.667 0.00 0.00 0.00 2.57
4178 11835 4.222847 CGCCTTCCGCCCCTCTAC 62.223 72.222 0.00 0.00 0.00 2.59
4179 11836 4.452251 TCGCCTTCCGCCCCTCTA 62.452 66.667 0.00 0.00 36.73 2.43
4187 11844 4.821589 GTCCAGCCTCGCCTTCCG 62.822 72.222 0.00 0.00 38.61 4.30
4188 11845 4.821589 CGTCCAGCCTCGCCTTCC 62.822 72.222 0.00 0.00 0.00 3.46
4189 11846 4.821589 CCGTCCAGCCTCGCCTTC 62.822 72.222 0.00 0.00 0.00 3.46
4192 11849 4.162690 ATTCCGTCCAGCCTCGCC 62.163 66.667 0.00 0.00 0.00 5.54
4193 11850 2.586357 GATTCCGTCCAGCCTCGC 60.586 66.667 0.00 0.00 0.00 5.03
4194 11851 0.391130 TTTGATTCCGTCCAGCCTCG 60.391 55.000 0.00 0.00 0.00 4.63
4195 11852 1.087501 GTTTGATTCCGTCCAGCCTC 58.912 55.000 0.00 0.00 0.00 4.70
4196 11853 0.400213 TGTTTGATTCCGTCCAGCCT 59.600 50.000 0.00 0.00 0.00 4.58
4197 11854 0.521735 GTGTTTGATTCCGTCCAGCC 59.478 55.000 0.00 0.00 0.00 4.85
4198 11855 0.165944 CGTGTTTGATTCCGTCCAGC 59.834 55.000 0.00 0.00 0.00 4.85
4199 11856 0.165944 GCGTGTTTGATTCCGTCCAG 59.834 55.000 0.00 0.00 0.00 3.86
4200 11857 1.231958 GGCGTGTTTGATTCCGTCCA 61.232 55.000 0.00 0.00 0.00 4.02
4201 11858 0.953960 AGGCGTGTTTGATTCCGTCC 60.954 55.000 0.00 0.00 0.00 4.79
4202 11859 0.872388 AAGGCGTGTTTGATTCCGTC 59.128 50.000 0.00 0.00 0.00 4.79
4203 11860 0.872388 GAAGGCGTGTTTGATTCCGT 59.128 50.000 0.00 0.00 0.00 4.69
4204 11861 0.168128 GGAAGGCGTGTTTGATTCCG 59.832 55.000 0.00 0.00 30.90 4.30
4205 11862 0.168128 CGGAAGGCGTGTTTGATTCC 59.832 55.000 0.00 0.00 36.81 3.01
4206 11863 0.454452 GCGGAAGGCGTGTTTGATTC 60.454 55.000 0.00 0.00 0.00 2.52
4207 11864 1.579429 GCGGAAGGCGTGTTTGATT 59.421 52.632 0.00 0.00 0.00 2.57
4208 11865 3.263941 GCGGAAGGCGTGTTTGAT 58.736 55.556 0.00 0.00 0.00 2.57
4217 11874 0.179097 CAGGAGAAGTAGCGGAAGGC 60.179 60.000 0.00 0.00 44.05 4.35
4218 11875 0.461961 CCAGGAGAAGTAGCGGAAGG 59.538 60.000 0.00 0.00 0.00 3.46
4219 11876 0.461961 CCCAGGAGAAGTAGCGGAAG 59.538 60.000 0.00 0.00 0.00 3.46
4220 11877 1.614241 GCCCAGGAGAAGTAGCGGAA 61.614 60.000 0.00 0.00 0.00 4.30
4221 11878 2.058595 GCCCAGGAGAAGTAGCGGA 61.059 63.158 0.00 0.00 0.00 5.54
4222 11879 2.501610 GCCCAGGAGAAGTAGCGG 59.498 66.667 0.00 0.00 0.00 5.52
4223 11880 2.501610 GGCCCAGGAGAAGTAGCG 59.498 66.667 0.00 0.00 0.00 4.26
4224 11881 2.501610 CGGCCCAGGAGAAGTAGC 59.498 66.667 0.00 0.00 0.00 3.58
4225 11882 3.095347 GCCGGCCCAGGAGAAGTAG 62.095 68.421 18.11 0.00 0.00 2.57
4226 11883 3.081409 GCCGGCCCAGGAGAAGTA 61.081 66.667 18.11 0.00 0.00 2.24
4242 11899 4.971125 GGCTCGATAGGCGGTGGC 62.971 72.222 0.00 0.00 38.69 5.01
4249 11906 2.578714 GCAGGGGAGGCTCGATAGG 61.579 68.421 8.69 0.00 0.00 2.57
4250 11907 2.925262 CGCAGGGGAGGCTCGATAG 61.925 68.421 8.69 0.00 0.00 2.08
4251 11908 2.912542 CGCAGGGGAGGCTCGATA 60.913 66.667 8.69 0.00 0.00 2.92
4319 11976 1.743321 CGGAGGCTCATGGAGGTCTC 61.743 65.000 17.69 0.16 0.00 3.36
4320 11977 1.760086 CGGAGGCTCATGGAGGTCT 60.760 63.158 17.69 0.00 0.00 3.85
4321 11978 2.818132 CGGAGGCTCATGGAGGTC 59.182 66.667 17.69 0.00 0.00 3.85
4322 11979 3.474570 GCGGAGGCTCATGGAGGT 61.475 66.667 17.69 0.00 35.83 3.85
4377 12034 4.072088 GTGTGAACTTCCGCGCGG 62.072 66.667 42.13 42.13 0.00 6.46
4378 12035 3.036084 AGTGTGAACTTCCGCGCG 61.036 61.111 25.67 25.67 32.79 6.86
4379 12036 2.551270 CAGTGTGAACTTCCGCGC 59.449 61.111 0.00 0.00 0.00 6.86
4380 12037 1.284982 CTCCAGTGTGAACTTCCGCG 61.285 60.000 0.00 0.00 0.00 6.46
4381 12038 1.569479 GCTCCAGTGTGAACTTCCGC 61.569 60.000 0.00 0.00 0.00 5.54
4382 12039 0.249868 TGCTCCAGTGTGAACTTCCG 60.250 55.000 0.00 0.00 0.00 4.30
4383 12040 1.517242 CTGCTCCAGTGTGAACTTCC 58.483 55.000 0.00 0.00 0.00 3.46
4384 12041 0.871057 GCTGCTCCAGTGTGAACTTC 59.129 55.000 0.00 0.00 33.43 3.01
4385 12042 0.471617 AGCTGCTCCAGTGTGAACTT 59.528 50.000 0.00 0.00 33.43 2.66
4386 12043 0.250209 CAGCTGCTCCAGTGTGAACT 60.250 55.000 0.00 0.00 33.43 3.01
4387 12044 0.533755 ACAGCTGCTCCAGTGTGAAC 60.534 55.000 15.27 0.00 33.43 3.18
4388 12045 0.250038 GACAGCTGCTCCAGTGTGAA 60.250 55.000 15.27 0.00 33.43 3.18
4389 12046 1.368950 GACAGCTGCTCCAGTGTGA 59.631 57.895 15.27 0.00 33.43 3.58
4390 12047 1.670406 GGACAGCTGCTCCAGTGTG 60.670 63.158 22.75 0.00 33.43 3.82
4391 12048 2.746359 GGACAGCTGCTCCAGTGT 59.254 61.111 22.75 0.00 33.43 3.55
4392 12049 2.433838 CGGACAGCTGCTCCAGTG 60.434 66.667 25.32 12.35 33.43 3.66
4393 12050 4.385405 GCGGACAGCTGCTCCAGT 62.385 66.667 25.32 4.33 43.23 4.00
4421 12078 3.119096 GTTGGACGCGGAGAAGCC 61.119 66.667 12.47 2.10 0.00 4.35
4422 12079 3.119096 GGTTGGACGCGGAGAAGC 61.119 66.667 12.47 5.34 0.00 3.86
4423 12080 1.738099 CAGGTTGGACGCGGAGAAG 60.738 63.158 12.47 0.00 0.00 2.85
4424 12081 2.342279 CAGGTTGGACGCGGAGAA 59.658 61.111 12.47 0.00 0.00 2.87
4425 12082 4.373116 GCAGGTTGGACGCGGAGA 62.373 66.667 12.47 0.00 0.00 3.71
4426 12083 4.379243 AGCAGGTTGGACGCGGAG 62.379 66.667 12.47 0.00 0.00 4.63
4427 12084 4.373116 GAGCAGGTTGGACGCGGA 62.373 66.667 12.47 0.00 0.00 5.54
4442 12099 3.207669 GAAGCTGCCATGGCCGAG 61.208 66.667 33.44 25.05 41.09 4.63
4447 12104 2.831742 ATGCCGAAGCTGCCATGG 60.832 61.111 7.63 7.63 40.80 3.66
4448 12105 2.411701 CATGCCGAAGCTGCCATG 59.588 61.111 0.00 0.00 40.80 3.66
4450 12107 4.349503 ACCATGCCGAAGCTGCCA 62.350 61.111 0.00 0.00 40.80 4.92
4451 12108 3.818787 CACCATGCCGAAGCTGCC 61.819 66.667 0.00 0.00 40.80 4.85
4452 12109 1.745115 TACACCATGCCGAAGCTGC 60.745 57.895 0.00 0.00 40.80 5.25
4453 12110 0.673333 TGTACACCATGCCGAAGCTG 60.673 55.000 0.00 0.00 40.80 4.24
4454 12111 0.036164 TTGTACACCATGCCGAAGCT 59.964 50.000 0.00 0.00 40.80 3.74
4457 12114 1.518325 CACTTGTACACCATGCCGAA 58.482 50.000 0.00 0.00 0.00 4.30
4458 12115 0.953471 GCACTTGTACACCATGCCGA 60.953 55.000 12.19 0.00 0.00 5.54
4461 12118 1.133025 GATGGCACTTGTACACCATGC 59.867 52.381 17.82 15.89 42.92 4.06
4462 12119 2.679837 GAGATGGCACTTGTACACCATG 59.320 50.000 17.82 7.89 42.92 3.66
4463 12120 2.356125 GGAGATGGCACTTGTACACCAT 60.356 50.000 13.94 13.94 45.52 3.55
4464 12121 1.003118 GGAGATGGCACTTGTACACCA 59.997 52.381 5.48 5.48 36.43 4.17
4465 12122 1.739067 GGAGATGGCACTTGTACACC 58.261 55.000 0.00 0.00 0.00 4.16
4466 12123 1.359848 CGGAGATGGCACTTGTACAC 58.640 55.000 0.00 0.00 0.00 2.90
4467 12124 0.391130 GCGGAGATGGCACTTGTACA 60.391 55.000 0.00 0.00 0.00 2.90
4468 12125 1.090052 GGCGGAGATGGCACTTGTAC 61.090 60.000 0.00 0.00 0.00 2.90
4470 12127 2.045926 GGCGGAGATGGCACTTGT 60.046 61.111 0.00 0.00 0.00 3.16
4471 12128 2.110967 CAGGCGGAGATGGCACTTG 61.111 63.158 0.00 0.00 36.77 3.16
4474 12131 3.785859 TCCAGGCGGAGATGGCAC 61.786 66.667 0.00 0.00 35.91 5.01
4475 12132 3.785859 GTCCAGGCGGAGATGGCA 61.786 66.667 0.00 0.00 43.99 4.92
4533 12190 3.730761 GGCACAGCTGCTTCACGG 61.731 66.667 15.27 0.00 43.66 4.94
4534 12191 4.081030 CGGCACAGCTGCTTCACG 62.081 66.667 15.27 8.04 43.66 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.