Multiple sequence alignment - TraesCS7D01G453700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G453700 chr7D 100.000 5021 0 0 1 5021 573392322 573387302 0.000000e+00 9273.0
1 TraesCS7D01G453700 chr7D 92.486 173 11 2 1554 1724 25036435 25036263 3.880000e-61 246.0
2 TraesCS7D01G453700 chr7D 88.587 184 9 4 1553 1724 17234603 17234420 3.940000e-51 213.0
3 TraesCS7D01G453700 chr7D 88.506 174 18 2 1552 1723 575532475 575532648 5.090000e-50 209.0
4 TraesCS7D01G453700 chr7D 87.647 170 21 0 13 182 573387770 573387939 1.100000e-46 198.0
5 TraesCS7D01G453700 chr7D 88.024 167 20 0 4384 4550 573392141 573392307 1.100000e-46 198.0
6 TraesCS7D01G453700 chr5D 97.600 2833 37 13 1725 4557 462358256 462361057 0.000000e+00 4826.0
7 TraesCS7D01G453700 chr5D 97.561 1558 21 5 13 1554 462356707 462358263 0.000000e+00 2651.0
8 TraesCS7D01G453700 chr5D 91.339 127 8 3 16 141 462361050 462360926 2.400000e-38 171.0
9 TraesCS7D01G453700 chr6B 94.324 2625 83 18 1725 4343 631135464 631132900 0.000000e+00 3962.0
10 TraesCS7D01G453700 chr6B 97.065 988 27 2 569 1554 631136444 631135457 0.000000e+00 1663.0
11 TraesCS7D01G453700 chr6B 89.052 612 57 3 3208 3809 32297001 32297612 0.000000e+00 750.0
12 TraesCS7D01G453700 chr6B 89.577 355 34 2 2652 3004 32296220 32296573 9.920000e-122 448.0
13 TraesCS7D01G453700 chr6B 95.745 235 9 1 328 561 631137015 631136781 1.320000e-100 377.0
14 TraesCS7D01G453700 chr6B 87.402 254 26 6 4305 4554 631132973 631132722 2.290000e-73 287.0
15 TraesCS7D01G453700 chr6B 90.270 185 14 3 1550 1730 642913269 642913085 6.500000e-59 239.0
16 TraesCS7D01G453700 chr6B 90.698 172 12 4 1555 1724 473090373 473090542 5.060000e-55 226.0
17 TraesCS7D01G453700 chr6B 86.239 218 16 3 3888 4104 32297673 32297877 1.820000e-54 224.0
18 TraesCS7D01G453700 chr6B 91.018 167 13 2 1554 1718 113328200 113328034 1.820000e-54 224.0
19 TraesCS7D01G453700 chr6B 89.349 169 16 2 9 175 631132719 631132887 1.420000e-50 211.0
20 TraesCS7D01G453700 chr6B 92.958 142 10 0 2037 2178 32296081 32296222 1.830000e-49 207.0
21 TraesCS7D01G453700 chr6B 96.491 57 2 0 3094 3150 32296568 32296624 1.490000e-15 95.3
22 TraesCS7D01G453700 chr1D 86.785 2414 262 24 1725 4098 132308547 132306151 0.000000e+00 2638.0
23 TraesCS7D01G453700 chr1D 89.598 423 44 0 1132 1554 132308962 132308540 5.720000e-149 538.0
24 TraesCS7D01G453700 chr1D 85.938 128 16 2 930 1056 132309071 132308945 8.770000e-28 135.0
25 TraesCS7D01G453700 chr4B 97.346 1432 30 3 1725 3156 438345298 438343875 0.000000e+00 2427.0
26 TraesCS7D01G453700 chr4B 97.098 1206 30 5 3140 4343 438343518 438342316 0.000000e+00 2028.0
27 TraesCS7D01G453700 chr4B 97.344 979 25 1 577 1554 438346269 438345291 0.000000e+00 1663.0
28 TraesCS7D01G453700 chr4B 93.147 394 14 8 178 561 438346948 438346558 2.620000e-157 566.0
29 TraesCS7D01G453700 chr4B 87.938 257 28 3 4298 4553 438342396 438342142 2.940000e-77 300.0
30 TraesCS7D01G453700 chr4B 96.753 154 4 1 13 166 438370460 438370308 6.450000e-64 255.0
31 TraesCS7D01G453700 chrUn 87.210 1251 137 16 1725 2969 96207773 96206540 0.000000e+00 1402.0
32 TraesCS7D01G453700 chrUn 87.584 1184 105 7 2963 4104 96188289 96187106 0.000000e+00 1334.0
33 TraesCS7D01G453700 chrUn 100.000 390 0 0 2898 3287 480002103 480001714 0.000000e+00 721.0
34 TraesCS7D01G453700 chrUn 88.281 128 13 2 930 1056 96208296 96208170 8.710000e-33 152.0
35 TraesCS7D01G453700 chr7A 89.715 1089 101 9 2420 3502 729361727 729362810 0.000000e+00 1380.0
36 TraesCS7D01G453700 chr7A 89.532 1089 104 8 2420 3502 729339160 729340244 0.000000e+00 1371.0
37 TraesCS7D01G453700 chr7A 88.072 612 68 5 1725 2333 729338391 729339000 0.000000e+00 721.0
38 TraesCS7D01G453700 chr7A 87.745 612 70 5 1725 2333 729360958 729361567 0.000000e+00 710.0
39 TraesCS7D01G453700 chr7A 85.956 591 58 6 3539 4104 729340236 729340826 4.300000e-170 608.0
40 TraesCS7D01G453700 chr7A 85.497 593 60 7 3538 4104 729362801 729363393 3.350000e-166 595.0
41 TraesCS7D01G453700 chr7A 87.783 221 9 11 4802 5019 663369735 663369530 5.020000e-60 243.0
42 TraesCS7D01G453700 chr7A 87.162 148 10 3 3585 3724 604392332 604392186 5.200000e-35 159.0
43 TraesCS7D01G453700 chr7A 77.778 135 23 5 4656 4788 663371120 663370991 5.390000e-10 76.8
44 TraesCS7D01G453700 chr7A 80.460 87 15 2 4467 4553 646473073 646472989 1.170000e-06 65.8
45 TraesCS7D01G453700 chr2B 86.207 377 42 4 2729 3095 444529104 444528728 2.820000e-107 399.0
46 TraesCS7D01G453700 chr2B 92.742 124 7 2 1554 1676 801156715 801156837 1.440000e-40 178.0
47 TraesCS7D01G453700 chr2B 76.471 221 42 9 1775 1992 763624493 763624706 1.480000e-20 111.0
48 TraesCS7D01G453700 chr3B 89.091 165 16 2 1555 1717 34055243 34055407 2.370000e-48 204.0
49 TraesCS7D01G453700 chr4A 87.027 185 11 6 1552 1724 735616177 735616360 3.970000e-46 196.0
50 TraesCS7D01G453700 chr2A 75.636 275 55 9 1726 1993 753502232 753502501 5.280000e-25 126.0
51 TraesCS7D01G453700 chr2D 81.290 155 25 4 1832 1984 621835221 621835373 6.830000e-24 122.0
52 TraesCS7D01G453700 chr2D 74.277 311 64 12 1832 2132 425514307 425514611 3.180000e-22 117.0
53 TraesCS7D01G453700 chr6D 77.305 141 32 0 2095 2235 437674226 437674086 3.220000e-12 84.2
54 TraesCS7D01G453700 chr7B 97.222 36 1 0 4664 4699 631084956 631084991 1.510000e-05 62.1
55 TraesCS7D01G453700 chr5A 100.000 31 0 0 4518 4548 5425070 5425040 1.950000e-04 58.4
56 TraesCS7D01G453700 chr3A 100.000 31 0 0 4518 4548 671351971 671352001 1.950000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G453700 chr7D 573387302 573392322 5020 True 9273.000000 9273 100.000000 1 5021 1 chr7D.!!$R3 5020
1 TraesCS7D01G453700 chr5D 462356707 462361057 4350 False 3738.500000 4826 97.580500 13 4557 2 chr5D.!!$F1 4544
2 TraesCS7D01G453700 chr6B 631132722 631137015 4293 True 1572.250000 3962 93.634000 328 4554 4 chr6B.!!$R3 4226
3 TraesCS7D01G453700 chr6B 32296081 32297877 1796 False 344.860000 750 90.863400 2037 4104 5 chr6B.!!$F3 2067
4 TraesCS7D01G453700 chr1D 132306151 132309071 2920 True 1103.666667 2638 87.440333 930 4098 3 chr1D.!!$R1 3168
5 TraesCS7D01G453700 chr4B 438342142 438346948 4806 True 1396.800000 2427 94.574600 178 4553 5 chr4B.!!$R2 4375
6 TraesCS7D01G453700 chrUn 96187106 96188289 1183 True 1334.000000 1334 87.584000 2963 4104 1 chrUn.!!$R1 1141
7 TraesCS7D01G453700 chrUn 96206540 96208296 1756 True 777.000000 1402 87.745500 930 2969 2 chrUn.!!$R3 2039
8 TraesCS7D01G453700 chr7A 729338391 729340826 2435 False 900.000000 1371 87.853333 1725 4104 3 chr7A.!!$F1 2379
9 TraesCS7D01G453700 chr7A 729360958 729363393 2435 False 895.000000 1380 87.652333 1725 4104 3 chr7A.!!$F2 2379

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
102 103 5.304778 TCACGAATCTGACCTTTTTCATCA 58.695 37.500 0.00 0.00 0.00 3.07 F
1078 1428 5.981088 ACATTGATGTTACTGCCAATTGA 57.019 34.783 7.12 0.00 37.90 2.57 F
1521 1872 0.247695 GTTTGAGCTTATCGGTGCGC 60.248 55.000 0.00 0.00 0.00 6.09 F
1597 1948 0.732880 CGCCGCTAATAGCACGCTAT 60.733 55.000 13.15 5.72 42.58 2.97 F
1658 2009 1.315690 TACCTCGCTAATAGCACGCT 58.684 50.000 13.15 0.00 42.58 5.07 F
3360 4207 0.753867 TCTTGGTTGCCGTACTGTCA 59.246 50.000 0.00 0.00 0.00 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1185 1535 0.323629 CGCAGGGGACAAAAGACCTA 59.676 55.000 0.00 0.0 0.00 3.08 R
2172 2524 2.092212 GGTTGTCATGATCATCCCAGGT 60.092 50.000 4.86 0.0 0.00 4.00 R
2483 2951 3.007831 GGGATGAAAGCAAAATTGTCCCA 59.992 43.478 10.70 0.0 42.83 4.37 R
3287 4134 5.390461 GCTACACTGTGACATTGCGAAATAA 60.390 40.000 15.86 0.0 0.00 1.40 R
3499 4350 5.731957 ATACATATATACGGGTGCACACA 57.268 39.130 21.13 0.0 0.00 3.72 R
4951 5853 0.030638 ACCAAGTGAACATGCGTTGC 59.969 50.000 0.00 0.0 34.75 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 6.321181 AGCTAGGACAAAATCACTGTTTTGAA 59.679 34.615 16.31 1.99 46.78 2.69
102 103 5.304778 TCACGAATCTGACCTTTTTCATCA 58.695 37.500 0.00 0.00 0.00 3.07
734 1083 7.775053 AAACAAGGATTAACATTCCTAGCAA 57.225 32.000 0.00 0.00 42.90 3.91
1078 1428 5.981088 ACATTGATGTTACTGCCAATTGA 57.019 34.783 7.12 0.00 37.90 2.57
1521 1872 0.247695 GTTTGAGCTTATCGGTGCGC 60.248 55.000 0.00 0.00 0.00 6.09
1555 1906 3.130280 GGAAGACCCGACTAAAAACCA 57.870 47.619 0.00 0.00 0.00 3.67
1556 1907 2.810274 GGAAGACCCGACTAAAAACCAC 59.190 50.000 0.00 0.00 0.00 4.16
1557 1908 3.495629 GGAAGACCCGACTAAAAACCACT 60.496 47.826 0.00 0.00 0.00 4.00
1558 1909 3.121738 AGACCCGACTAAAAACCACTG 57.878 47.619 0.00 0.00 0.00 3.66
1559 1910 2.701951 AGACCCGACTAAAAACCACTGA 59.298 45.455 0.00 0.00 0.00 3.41
1560 1911 3.135167 AGACCCGACTAAAAACCACTGAA 59.865 43.478 0.00 0.00 0.00 3.02
1561 1912 3.878699 GACCCGACTAAAAACCACTGAAA 59.121 43.478 0.00 0.00 0.00 2.69
1562 1913 4.271661 ACCCGACTAAAAACCACTGAAAA 58.728 39.130 0.00 0.00 0.00 2.29
1563 1914 4.705991 ACCCGACTAAAAACCACTGAAAAA 59.294 37.500 0.00 0.00 0.00 1.94
1590 1941 1.582502 CGCTATAACGCCGCTAATAGC 59.417 52.381 13.04 13.04 42.10 2.97
1591 1942 2.602878 GCTATAACGCCGCTAATAGCA 58.397 47.619 13.15 0.00 43.98 3.49
1592 1943 2.344741 GCTATAACGCCGCTAATAGCAC 59.655 50.000 13.15 2.74 43.98 4.40
1593 1944 1.415374 ATAACGCCGCTAATAGCACG 58.585 50.000 18.94 18.94 42.58 5.34
1594 1945 1.210545 TAACGCCGCTAATAGCACGC 61.211 55.000 20.02 15.33 42.58 5.34
1595 1946 2.658593 CGCCGCTAATAGCACGCT 60.659 61.111 13.15 0.00 42.58 5.07
1596 1947 1.371267 CGCCGCTAATAGCACGCTA 60.371 57.895 13.15 0.39 42.58 4.26
1597 1948 0.732880 CGCCGCTAATAGCACGCTAT 60.733 55.000 13.15 5.72 42.58 2.97
1598 1949 1.466866 CGCCGCTAATAGCACGCTATA 60.467 52.381 13.15 1.16 42.58 1.31
1599 1950 2.186076 GCCGCTAATAGCACGCTATAG 58.814 52.381 13.15 10.32 42.58 1.31
1600 1951 2.186076 CCGCTAATAGCACGCTATAGC 58.814 52.381 15.09 15.09 42.58 2.97
1601 1952 2.415491 CCGCTAATAGCACGCTATAGCA 60.415 50.000 23.99 4.83 42.58 3.49
1602 1953 3.439293 CGCTAATAGCACGCTATAGCAT 58.561 45.455 23.99 6.50 42.58 3.79
1603 1954 3.241553 CGCTAATAGCACGCTATAGCATG 59.758 47.826 23.99 20.27 42.58 4.06
1604 1955 4.177026 GCTAATAGCACGCTATAGCATGT 58.823 43.478 23.99 12.06 41.89 3.21
1605 1956 5.340803 GCTAATAGCACGCTATAGCATGTA 58.659 41.667 23.99 13.81 41.89 2.29
1606 1957 5.457148 GCTAATAGCACGCTATAGCATGTAG 59.543 44.000 23.99 16.22 41.89 2.74
1607 1958 5.644977 AATAGCACGCTATAGCATGTAGA 57.355 39.130 23.99 9.31 42.21 2.59
1608 1959 3.567576 AGCACGCTATAGCATGTAGAG 57.432 47.619 23.99 8.58 42.21 2.43
1609 1960 3.149981 AGCACGCTATAGCATGTAGAGA 58.850 45.455 23.99 0.00 42.21 3.10
1610 1961 3.570125 AGCACGCTATAGCATGTAGAGAA 59.430 43.478 23.99 0.00 42.21 2.87
1611 1962 4.219507 AGCACGCTATAGCATGTAGAGAAT 59.780 41.667 23.99 0.00 42.21 2.40
1612 1963 4.926238 GCACGCTATAGCATGTAGAGAATT 59.074 41.667 23.99 0.00 42.21 2.17
1613 1964 5.164012 GCACGCTATAGCATGTAGAGAATTG 60.164 44.000 23.99 5.79 42.21 2.32
1614 1965 5.923114 CACGCTATAGCATGTAGAGAATTGT 59.077 40.000 23.99 6.41 42.21 2.71
1615 1966 6.088749 CACGCTATAGCATGTAGAGAATTGTC 59.911 42.308 23.99 0.00 42.21 3.18
1616 1967 6.015856 ACGCTATAGCATGTAGAGAATTGTCT 60.016 38.462 23.99 10.33 42.21 3.41
1617 1968 6.526325 CGCTATAGCATGTAGAGAATTGTCTC 59.474 42.308 23.99 0.00 45.16 3.36
1618 1969 6.526325 GCTATAGCATGTAGAGAATTGTCTCG 59.474 42.308 20.01 0.00 46.73 4.04
1619 1970 8.774521 GCTATAGCATGTAGAGAATTGTCTCGC 61.775 44.444 20.01 8.03 46.73 5.03
1653 2004 8.752766 TTAATGTACAATACCTCGCTAATAGC 57.247 34.615 0.00 1.41 38.02 2.97
1654 2005 5.777850 TGTACAATACCTCGCTAATAGCA 57.222 39.130 13.15 0.00 42.58 3.49
1655 2006 5.526115 TGTACAATACCTCGCTAATAGCAC 58.474 41.667 13.15 0.00 42.58 4.40
1656 2007 3.639538 ACAATACCTCGCTAATAGCACG 58.360 45.455 13.15 2.14 42.58 5.34
1657 2008 2.349297 ATACCTCGCTAATAGCACGC 57.651 50.000 13.15 0.00 42.58 5.34
1658 2009 1.315690 TACCTCGCTAATAGCACGCT 58.684 50.000 13.15 0.00 42.58 5.07
1659 2010 1.315690 ACCTCGCTAATAGCACGCTA 58.684 50.000 13.15 0.39 42.58 4.26
1660 2011 1.887198 ACCTCGCTAATAGCACGCTAT 59.113 47.619 13.15 5.72 42.58 2.97
1661 2012 3.079578 ACCTCGCTAATAGCACGCTATA 58.920 45.455 13.15 1.16 42.58 1.31
1662 2013 3.127203 ACCTCGCTAATAGCACGCTATAG 59.873 47.826 13.15 10.32 42.58 1.31
1663 2014 3.127203 CCTCGCTAATAGCACGCTATAGT 59.873 47.826 13.15 0.68 42.58 2.12
1664 2015 4.331992 CCTCGCTAATAGCACGCTATAGTA 59.668 45.833 13.15 1.81 42.58 1.82
1665 2016 5.213913 TCGCTAATAGCACGCTATAGTAC 57.786 43.478 13.15 2.48 42.58 2.73
1666 2017 4.020518 CGCTAATAGCACGCTATAGTACG 58.979 47.826 13.15 9.75 42.58 3.67
1667 2018 3.784994 GCTAATAGCACGCTATAGTACGC 59.215 47.826 11.80 6.98 41.89 4.42
1668 2019 4.437121 GCTAATAGCACGCTATAGTACGCT 60.437 45.833 11.80 13.86 41.89 5.07
1669 2020 5.220548 GCTAATAGCACGCTATAGTACGCTA 60.221 44.000 11.80 16.36 41.89 4.26
1670 2021 5.618056 AATAGCACGCTATAGTACGCTAA 57.382 39.130 11.80 6.94 38.20 3.09
1671 2022 5.814764 ATAGCACGCTATAGTACGCTAAT 57.185 39.130 17.36 8.29 37.47 1.73
1672 2023 6.915544 ATAGCACGCTATAGTACGCTAATA 57.084 37.500 17.36 4.11 37.47 0.98
1673 2024 5.219226 AGCACGCTATAGTACGCTAATAG 57.781 43.478 9.34 0.00 0.00 1.73
1674 2025 3.784994 GCACGCTATAGTACGCTAATAGC 59.215 47.826 16.23 16.23 38.02 2.97
1675 2026 4.670992 GCACGCTATAGTACGCTAATAGCA 60.671 45.833 21.55 0.00 42.58 3.49
1676 2027 5.570344 CACGCTATAGTACGCTAATAGCAT 58.430 41.667 21.55 0.00 42.58 3.79
1677 2028 6.712549 CACGCTATAGTACGCTAATAGCATA 58.287 40.000 21.55 0.00 42.58 3.14
1678 2029 7.353497 CACGCTATAGTACGCTAATAGCATAT 58.647 38.462 21.55 7.17 42.58 1.78
1679 2030 7.856398 CACGCTATAGTACGCTAATAGCATATT 59.144 37.037 21.55 0.70 42.58 1.28
1680 2031 8.404000 ACGCTATAGTACGCTAATAGCATATTT 58.596 33.333 21.55 0.00 42.58 1.40
1681 2032 9.234384 CGCTATAGTACGCTAATAGCATATTTT 57.766 33.333 21.55 0.00 42.58 1.82
1686 2037 8.749841 AGTACGCTAATAGCATATTTTCAGAG 57.250 34.615 13.15 0.00 42.58 3.35
1687 2038 7.815068 AGTACGCTAATAGCATATTTTCAGAGG 59.185 37.037 13.15 0.00 42.58 3.69
1688 2039 5.409826 ACGCTAATAGCATATTTTCAGAGGC 59.590 40.000 13.15 0.00 42.58 4.70
1689 2040 5.445142 CGCTAATAGCATATTTTCAGAGGCG 60.445 44.000 13.15 0.00 42.58 5.52
1690 2041 5.639506 GCTAATAGCATATTTTCAGAGGCGA 59.360 40.000 7.49 0.00 41.89 5.54
1691 2042 5.931441 AATAGCATATTTTCAGAGGCGAC 57.069 39.130 0.00 0.00 0.00 5.19
1692 2043 2.205074 AGCATATTTTCAGAGGCGACG 58.795 47.619 0.00 0.00 0.00 5.12
1693 2044 1.333258 GCATATTTTCAGAGGCGACGC 60.333 52.381 12.43 12.43 0.00 5.19
1694 2045 2.205074 CATATTTTCAGAGGCGACGCT 58.795 47.619 20.77 5.59 43.32 5.07
1695 2046 3.381045 CATATTTTCAGAGGCGACGCTA 58.619 45.455 20.77 0.64 39.02 4.26
1696 2047 2.604046 ATTTTCAGAGGCGACGCTAT 57.396 45.000 20.77 8.91 39.02 2.97
1697 2048 2.380084 TTTTCAGAGGCGACGCTATT 57.620 45.000 20.77 5.75 39.02 1.73
1698 2049 2.380084 TTTCAGAGGCGACGCTATTT 57.620 45.000 20.77 3.04 39.02 1.40
1699 2050 2.380084 TTCAGAGGCGACGCTATTTT 57.620 45.000 20.77 0.38 39.02 1.82
1700 2051 2.380084 TCAGAGGCGACGCTATTTTT 57.620 45.000 20.77 0.00 39.02 1.94
1701 2052 1.999735 TCAGAGGCGACGCTATTTTTG 59.000 47.619 20.77 9.85 39.02 2.44
1702 2053 1.732259 CAGAGGCGACGCTATTTTTGT 59.268 47.619 20.77 0.00 39.02 2.83
1703 2054 2.927477 CAGAGGCGACGCTATTTTTGTA 59.073 45.455 20.77 0.00 39.02 2.41
1704 2055 3.000322 CAGAGGCGACGCTATTTTTGTAG 60.000 47.826 20.77 0.00 39.02 2.74
1705 2056 1.664151 AGGCGACGCTATTTTTGTAGC 59.336 47.619 20.77 0.00 42.83 3.58
1706 2057 1.395608 GGCGACGCTATTTTTGTAGCA 59.604 47.619 20.77 0.00 45.78 3.49
1707 2058 2.428114 GCGACGCTATTTTTGTAGCAC 58.572 47.619 13.73 0.05 45.78 4.40
1708 2059 2.678705 CGACGCTATTTTTGTAGCACG 58.321 47.619 6.71 7.22 45.78 5.34
1709 2060 2.428114 GACGCTATTTTTGTAGCACGC 58.572 47.619 6.71 0.00 45.78 5.34
1710 2061 2.073816 ACGCTATTTTTGTAGCACGCT 58.926 42.857 6.71 0.00 45.78 5.07
1711 2062 3.255725 ACGCTATTTTTGTAGCACGCTA 58.744 40.909 6.71 0.00 45.78 4.26
1712 2063 3.869246 ACGCTATTTTTGTAGCACGCTAT 59.131 39.130 1.43 0.00 45.78 2.97
1713 2064 4.331717 ACGCTATTTTTGTAGCACGCTATT 59.668 37.500 1.43 0.00 45.78 1.73
1714 2065 5.163794 ACGCTATTTTTGTAGCACGCTATTT 60.164 36.000 1.43 0.00 45.78 1.40
1715 2066 5.737290 CGCTATTTTTGTAGCACGCTATTTT 59.263 36.000 1.43 0.00 45.78 1.82
1716 2067 6.250527 CGCTATTTTTGTAGCACGCTATTTTT 59.749 34.615 1.43 0.00 45.78 1.94
2172 2524 2.094906 CCGAGAGTGATTGGTTACGACA 60.095 50.000 0.00 0.00 0.00 4.35
2237 2589 2.818751 ACAAGTGGGACAAGGTTTCA 57.181 45.000 0.00 0.00 44.16 2.69
2303 2655 1.719780 GAGTTTGACACGCTAACCTCG 59.280 52.381 0.00 0.00 33.49 4.63
2483 2951 2.060567 ATGGCAGCCATATGGAGCGT 62.061 55.000 26.59 15.84 43.19 5.07
2896 3367 4.194640 AGTACGATGAAGCTGCATTTGAT 58.805 39.130 9.09 0.00 0.00 2.57
3360 4207 0.753867 TCTTGGTTGCCGTACTGTCA 59.246 50.000 0.00 0.00 0.00 3.58
3499 4350 4.428294 AGACGAATGTTCCCATCATCAT 57.572 40.909 0.00 0.00 0.00 2.45
3500 4351 4.132336 AGACGAATGTTCCCATCATCATG 58.868 43.478 0.00 0.00 0.00 3.07
3948 4837 0.245539 CGGCACCGAAGAAGGTTCTA 59.754 55.000 2.01 0.00 43.00 2.10
4186 5084 2.515523 CTGCCAAGCATAGCGCCT 60.516 61.111 2.29 0.00 44.04 5.52
4328 5226 3.558099 GAAGCACAACGCCCTTGCC 62.558 63.158 0.00 0.00 44.04 4.52
4394 5292 2.596338 TCGAGAGACCGTGCCACA 60.596 61.111 0.00 0.00 33.31 4.17
4447 5345 2.159653 GCTATAATGTGGTGCATAGCGC 60.160 50.000 0.00 0.00 37.28 5.92
4557 5459 1.560505 ACAGTGATTTTGCCCCCATC 58.439 50.000 0.00 0.00 0.00 3.51
4558 5460 1.203162 ACAGTGATTTTGCCCCCATCA 60.203 47.619 0.00 0.00 0.00 3.07
4559 5461 1.479323 CAGTGATTTTGCCCCCATCAG 59.521 52.381 0.00 0.00 0.00 2.90
4560 5462 0.176449 GTGATTTTGCCCCCATCAGC 59.824 55.000 0.00 0.00 0.00 4.26
4561 5463 0.041535 TGATTTTGCCCCCATCAGCT 59.958 50.000 0.00 0.00 0.00 4.24
4562 5464 1.287442 TGATTTTGCCCCCATCAGCTA 59.713 47.619 0.00 0.00 0.00 3.32
4563 5465 1.959282 GATTTTGCCCCCATCAGCTAG 59.041 52.381 0.00 0.00 0.00 3.42
4564 5466 0.998928 TTTTGCCCCCATCAGCTAGA 59.001 50.000 0.00 0.00 0.00 2.43
4565 5467 0.548031 TTTGCCCCCATCAGCTAGAG 59.452 55.000 0.00 0.00 0.00 2.43
4566 5468 1.348008 TTGCCCCCATCAGCTAGAGG 61.348 60.000 0.00 0.00 0.00 3.69
4567 5469 3.155750 CCCCCATCAGCTAGAGGC 58.844 66.667 0.00 0.00 42.19 4.70
4568 5470 1.767672 CCCCCATCAGCTAGAGGCA 60.768 63.158 0.00 0.00 44.79 4.75
4569 5471 1.348008 CCCCCATCAGCTAGAGGCAA 61.348 60.000 0.00 0.00 44.79 4.52
4570 5472 0.179034 CCCCATCAGCTAGAGGCAAC 60.179 60.000 0.00 0.00 44.79 4.17
4583 5485 2.110296 GGCAACTTGGAGCTATGGC 58.890 57.895 0.00 0.00 39.06 4.40
4584 5486 1.718757 GGCAACTTGGAGCTATGGCG 61.719 60.000 0.00 0.00 44.37 5.69
4585 5487 1.718757 GCAACTTGGAGCTATGGCGG 61.719 60.000 0.00 0.00 44.37 6.13
4586 5488 1.452108 AACTTGGAGCTATGGCGGC 60.452 57.895 0.00 0.00 44.37 6.53
4587 5489 1.915078 AACTTGGAGCTATGGCGGCT 61.915 55.000 11.43 0.00 44.37 5.52
4588 5490 1.890979 CTTGGAGCTATGGCGGCTG 60.891 63.158 11.43 1.44 44.37 4.85
4589 5491 2.599645 CTTGGAGCTATGGCGGCTGT 62.600 60.000 11.43 1.10 44.37 4.40
4590 5492 2.190578 GGAGCTATGGCGGCTGTT 59.809 61.111 11.43 0.00 44.37 3.16
4591 5493 2.182842 GGAGCTATGGCGGCTGTTG 61.183 63.158 11.43 1.21 44.37 3.33
4592 5494 1.450312 GAGCTATGGCGGCTGTTGT 60.450 57.895 11.43 0.00 44.37 3.32
4593 5495 0.179084 GAGCTATGGCGGCTGTTGTA 60.179 55.000 11.43 0.00 44.37 2.41
4594 5496 0.179073 AGCTATGGCGGCTGTTGTAG 60.179 55.000 11.43 6.11 44.37 2.74
4602 5504 2.260434 GCTGTTGTAGCGACCGGA 59.740 61.111 9.46 0.00 43.63 5.14
4603 5505 1.373748 GCTGTTGTAGCGACCGGAA 60.374 57.895 9.46 0.00 43.63 4.30
4604 5506 1.623973 GCTGTTGTAGCGACCGGAAC 61.624 60.000 9.46 0.00 43.63 3.62
4605 5507 0.319211 CTGTTGTAGCGACCGGAACA 60.319 55.000 9.46 5.33 0.00 3.18
4606 5508 0.598158 TGTTGTAGCGACCGGAACAC 60.598 55.000 9.46 0.00 0.00 3.32
4607 5509 0.319297 GTTGTAGCGACCGGAACACT 60.319 55.000 9.46 3.67 0.00 3.55
4608 5510 0.390124 TTGTAGCGACCGGAACACTT 59.610 50.000 9.46 0.00 0.00 3.16
4609 5511 0.390124 TGTAGCGACCGGAACACTTT 59.610 50.000 9.46 0.00 0.00 2.66
4610 5512 1.066136 GTAGCGACCGGAACACTTTC 58.934 55.000 9.46 0.00 0.00 2.62
4619 5521 3.845625 GAACACTTTCCACTTGCGG 57.154 52.632 0.00 0.00 0.00 5.69
4620 5522 1.021968 GAACACTTTCCACTTGCGGT 58.978 50.000 0.00 0.00 0.00 5.68
4621 5523 0.738389 AACACTTTCCACTTGCGGTG 59.262 50.000 3.08 3.08 44.96 4.94
4632 5534 2.125552 TGCGGTGGCATCTTCGAG 60.126 61.111 0.00 0.00 46.21 4.04
4633 5535 2.184322 GCGGTGGCATCTTCGAGA 59.816 61.111 0.00 0.00 39.62 4.04
4634 5536 2.167861 GCGGTGGCATCTTCGAGAC 61.168 63.158 0.00 0.00 39.62 3.36
4635 5537 1.215382 CGGTGGCATCTTCGAGACA 59.785 57.895 0.00 0.00 0.00 3.41
4636 5538 0.803768 CGGTGGCATCTTCGAGACAG 60.804 60.000 0.00 0.00 0.00 3.51
4637 5539 0.532573 GGTGGCATCTTCGAGACAGA 59.467 55.000 0.00 0.00 0.00 3.41
4638 5540 1.634702 GTGGCATCTTCGAGACAGAC 58.365 55.000 0.00 0.00 0.00 3.51
4639 5541 0.171231 TGGCATCTTCGAGACAGACG 59.829 55.000 0.00 0.00 0.00 4.18
4640 5542 0.452184 GGCATCTTCGAGACAGACGA 59.548 55.000 0.00 0.00 37.99 4.20
4641 5543 1.540407 GCATCTTCGAGACAGACGAC 58.460 55.000 0.00 0.00 39.46 4.34
4642 5544 1.131504 GCATCTTCGAGACAGACGACT 59.868 52.381 0.00 0.00 39.46 4.18
4651 5553 4.097218 CAGACGACTGGAGTGGGA 57.903 61.111 7.02 0.00 40.14 4.37
4652 5554 2.584673 CAGACGACTGGAGTGGGAT 58.415 57.895 7.02 0.00 40.14 3.85
4653 5555 0.174389 CAGACGACTGGAGTGGGATG 59.826 60.000 7.02 0.00 40.14 3.51
4654 5556 0.972983 AGACGACTGGAGTGGGATGG 60.973 60.000 0.00 0.00 0.00 3.51
4655 5557 0.970937 GACGACTGGAGTGGGATGGA 60.971 60.000 0.00 0.00 0.00 3.41
4656 5558 0.325671 ACGACTGGAGTGGGATGGAT 60.326 55.000 0.00 0.00 0.00 3.41
4657 5559 0.833287 CGACTGGAGTGGGATGGATT 59.167 55.000 0.00 0.00 0.00 3.01
4658 5560 1.473965 CGACTGGAGTGGGATGGATTG 60.474 57.143 0.00 0.00 0.00 2.67
4659 5561 0.257039 ACTGGAGTGGGATGGATTGC 59.743 55.000 0.00 0.00 0.00 3.56
4660 5562 0.549950 CTGGAGTGGGATGGATTGCT 59.450 55.000 0.00 0.00 0.00 3.91
4661 5563 1.770658 CTGGAGTGGGATGGATTGCTA 59.229 52.381 0.00 0.00 0.00 3.49
4662 5564 1.490490 TGGAGTGGGATGGATTGCTAC 59.510 52.381 0.00 0.00 0.00 3.58
4663 5565 1.202818 GGAGTGGGATGGATTGCTACC 60.203 57.143 0.00 0.00 0.00 3.18
4664 5566 1.771255 GAGTGGGATGGATTGCTACCT 59.229 52.381 0.00 0.00 0.00 3.08
4665 5567 1.492176 AGTGGGATGGATTGCTACCTG 59.508 52.381 0.00 0.00 0.00 4.00
4666 5568 0.183492 TGGGATGGATTGCTACCTGC 59.817 55.000 0.00 0.00 43.25 4.85
4667 5569 0.886490 GGGATGGATTGCTACCTGCG 60.886 60.000 0.00 0.00 46.63 5.18
4668 5570 1.510480 GGATGGATTGCTACCTGCGC 61.510 60.000 0.00 0.00 46.63 6.09
4669 5571 1.835483 GATGGATTGCTACCTGCGCG 61.835 60.000 0.00 0.00 46.63 6.86
4670 5572 2.202878 GGATTGCTACCTGCGCGA 60.203 61.111 12.10 0.00 46.63 5.87
4671 5573 1.595382 GGATTGCTACCTGCGCGAT 60.595 57.895 12.10 0.00 46.63 4.58
4672 5574 1.560860 GGATTGCTACCTGCGCGATC 61.561 60.000 12.10 0.00 46.63 3.69
4673 5575 0.875908 GATTGCTACCTGCGCGATCA 60.876 55.000 12.10 0.00 44.20 2.92
4674 5576 0.461870 ATTGCTACCTGCGCGATCAA 60.462 50.000 12.10 0.00 46.63 2.57
4675 5577 0.672091 TTGCTACCTGCGCGATCAAA 60.672 50.000 12.10 0.00 46.63 2.69
4676 5578 1.083806 TGCTACCTGCGCGATCAAAG 61.084 55.000 12.10 1.51 46.63 2.77
4677 5579 1.084370 GCTACCTGCGCGATCAAAGT 61.084 55.000 12.10 2.22 0.00 2.66
4678 5580 0.647410 CTACCTGCGCGATCAAAGTG 59.353 55.000 12.10 0.00 0.00 3.16
4679 5581 0.739462 TACCTGCGCGATCAAAGTGG 60.739 55.000 12.10 0.00 0.00 4.00
4680 5582 2.753966 CCTGCGCGATCAAAGTGGG 61.754 63.158 12.10 0.00 0.00 4.61
4681 5583 3.386867 CTGCGCGATCAAAGTGGGC 62.387 63.158 12.10 0.00 41.40 5.36
4682 5584 3.430862 GCGCGATCAAAGTGGGCA 61.431 61.111 12.10 0.00 40.80 5.36
4683 5585 2.976840 GCGCGATCAAAGTGGGCAA 61.977 57.895 12.10 0.00 40.80 4.52
4684 5586 1.578926 CGCGATCAAAGTGGGCAAA 59.421 52.632 0.00 0.00 0.00 3.68
4685 5587 0.454957 CGCGATCAAAGTGGGCAAAG 60.455 55.000 0.00 0.00 0.00 2.77
4686 5588 0.733909 GCGATCAAAGTGGGCAAAGC 60.734 55.000 0.00 0.00 0.00 3.51
4687 5589 0.597568 CGATCAAAGTGGGCAAAGCA 59.402 50.000 0.00 0.00 0.00 3.91
4688 5590 1.000385 CGATCAAAGTGGGCAAAGCAA 60.000 47.619 0.00 0.00 0.00 3.91
4689 5591 2.680577 GATCAAAGTGGGCAAAGCAAG 58.319 47.619 0.00 0.00 0.00 4.01
4690 5592 0.752054 TCAAAGTGGGCAAAGCAAGG 59.248 50.000 0.00 0.00 0.00 3.61
4691 5593 0.752054 CAAAGTGGGCAAAGCAAGGA 59.248 50.000 0.00 0.00 0.00 3.36
4692 5594 1.345415 CAAAGTGGGCAAAGCAAGGAT 59.655 47.619 0.00 0.00 0.00 3.24
4693 5595 1.720781 AAGTGGGCAAAGCAAGGATT 58.279 45.000 0.00 0.00 0.00 3.01
4694 5596 2.603075 AGTGGGCAAAGCAAGGATTA 57.397 45.000 0.00 0.00 0.00 1.75
4695 5597 2.171003 AGTGGGCAAAGCAAGGATTAC 58.829 47.619 0.00 0.00 0.00 1.89
4696 5598 1.135402 GTGGGCAAAGCAAGGATTACG 60.135 52.381 0.00 0.00 0.00 3.18
4697 5599 0.455815 GGGCAAAGCAAGGATTACGG 59.544 55.000 0.00 0.00 0.00 4.02
4698 5600 1.459450 GGCAAAGCAAGGATTACGGA 58.541 50.000 0.00 0.00 0.00 4.69
4699 5601 1.132453 GGCAAAGCAAGGATTACGGAC 59.868 52.381 0.00 0.00 0.00 4.79
4700 5602 1.132453 GCAAAGCAAGGATTACGGACC 59.868 52.381 0.00 0.00 0.00 4.46
4701 5603 2.432444 CAAAGCAAGGATTACGGACCA 58.568 47.619 0.00 0.00 0.00 4.02
4702 5604 2.403252 AAGCAAGGATTACGGACCAG 57.597 50.000 0.00 0.00 0.00 4.00
4703 5605 0.107654 AGCAAGGATTACGGACCAGC 60.108 55.000 0.00 0.00 0.00 4.85
4704 5606 1.095807 GCAAGGATTACGGACCAGCC 61.096 60.000 0.00 0.00 0.00 4.85
4713 5615 3.305314 GGACCAGCCGATGTACCA 58.695 61.111 0.00 0.00 0.00 3.25
4714 5616 1.830145 GGACCAGCCGATGTACCAT 59.170 57.895 0.00 0.00 0.00 3.55
4715 5617 0.180406 GGACCAGCCGATGTACCATT 59.820 55.000 0.00 0.00 0.00 3.16
4716 5618 1.299541 GACCAGCCGATGTACCATTG 58.700 55.000 0.00 0.00 0.00 2.82
4717 5619 0.748005 ACCAGCCGATGTACCATTGC 60.748 55.000 0.00 0.00 0.00 3.56
4718 5620 0.464373 CCAGCCGATGTACCATTGCT 60.464 55.000 0.00 0.00 0.00 3.91
4719 5621 0.940126 CAGCCGATGTACCATTGCTC 59.060 55.000 0.00 0.00 0.00 4.26
4720 5622 0.833287 AGCCGATGTACCATTGCTCT 59.167 50.000 0.00 0.00 0.00 4.09
4721 5623 0.940126 GCCGATGTACCATTGCTCTG 59.060 55.000 0.00 0.00 0.00 3.35
4722 5624 1.473257 GCCGATGTACCATTGCTCTGA 60.473 52.381 0.00 0.00 0.00 3.27
4723 5625 2.905075 CCGATGTACCATTGCTCTGAA 58.095 47.619 0.00 0.00 0.00 3.02
4724 5626 3.470709 CCGATGTACCATTGCTCTGAAT 58.529 45.455 0.00 0.00 0.00 2.57
4725 5627 4.631131 CCGATGTACCATTGCTCTGAATA 58.369 43.478 0.00 0.00 0.00 1.75
4726 5628 5.056480 CCGATGTACCATTGCTCTGAATAA 58.944 41.667 0.00 0.00 0.00 1.40
4727 5629 5.702670 CCGATGTACCATTGCTCTGAATAAT 59.297 40.000 0.00 0.00 0.00 1.28
4728 5630 6.873605 CCGATGTACCATTGCTCTGAATAATA 59.126 38.462 0.00 0.00 0.00 0.98
4729 5631 7.387673 CCGATGTACCATTGCTCTGAATAATAA 59.612 37.037 0.00 0.00 0.00 1.40
4730 5632 8.939929 CGATGTACCATTGCTCTGAATAATAAT 58.060 33.333 0.00 0.00 0.00 1.28
4736 5638 9.081204 ACCATTGCTCTGAATAATAATTATGCA 57.919 29.630 0.00 0.00 30.49 3.96
4740 5642 8.058667 TGCTCTGAATAATAATTATGCATGGG 57.941 34.615 10.16 0.00 30.88 4.00
4741 5643 7.123098 TGCTCTGAATAATAATTATGCATGGGG 59.877 37.037 10.16 0.00 30.88 4.96
4742 5644 7.408756 TCTGAATAATAATTATGCATGGGGC 57.591 36.000 10.16 0.00 45.13 5.80
4752 5654 2.914379 GCATGGGGCACGTATAGAC 58.086 57.895 0.00 0.00 43.97 2.59
4753 5655 0.105964 GCATGGGGCACGTATAGACA 59.894 55.000 0.00 0.00 43.97 3.41
4754 5656 1.474320 GCATGGGGCACGTATAGACAA 60.474 52.381 0.00 0.00 43.97 3.18
4755 5657 2.912771 CATGGGGCACGTATAGACAAA 58.087 47.619 0.00 0.00 0.00 2.83
4756 5658 2.684001 TGGGGCACGTATAGACAAAG 57.316 50.000 0.00 0.00 0.00 2.77
4757 5659 1.208535 TGGGGCACGTATAGACAAAGG 59.791 52.381 0.00 0.00 0.00 3.11
4758 5660 1.296727 GGGCACGTATAGACAAAGGC 58.703 55.000 0.00 0.00 0.00 4.35
4759 5661 0.928229 GGCACGTATAGACAAAGGCG 59.072 55.000 0.00 0.00 0.00 5.52
4760 5662 1.470285 GGCACGTATAGACAAAGGCGA 60.470 52.381 0.00 0.00 0.00 5.54
4761 5663 2.470821 GCACGTATAGACAAAGGCGAT 58.529 47.619 0.00 0.00 0.00 4.58
4762 5664 3.551454 GGCACGTATAGACAAAGGCGATA 60.551 47.826 0.00 0.00 0.00 2.92
4763 5665 3.424529 GCACGTATAGACAAAGGCGATAC 59.575 47.826 0.00 0.00 0.00 2.24
4764 5666 4.792057 GCACGTATAGACAAAGGCGATACT 60.792 45.833 0.00 0.00 0.00 2.12
4765 5667 5.279384 CACGTATAGACAAAGGCGATACTT 58.721 41.667 0.00 0.00 0.00 2.24
4766 5668 6.432936 CACGTATAGACAAAGGCGATACTTA 58.567 40.000 0.00 0.00 0.00 2.24
4767 5669 6.359087 CACGTATAGACAAAGGCGATACTTAC 59.641 42.308 0.00 0.00 0.00 2.34
4768 5670 5.562998 CGTATAGACAAAGGCGATACTTACG 59.437 44.000 2.46 0.00 0.00 3.18
4769 5671 3.863142 AGACAAAGGCGATACTTACGT 57.137 42.857 0.00 0.00 0.00 3.57
4770 5672 4.970662 AGACAAAGGCGATACTTACGTA 57.029 40.909 0.00 0.00 0.00 3.57
4771 5673 4.666237 AGACAAAGGCGATACTTACGTAC 58.334 43.478 0.00 0.00 0.00 3.67
4772 5674 4.156556 AGACAAAGGCGATACTTACGTACA 59.843 41.667 0.00 0.00 0.00 2.90
4773 5675 4.168760 ACAAAGGCGATACTTACGTACAC 58.831 43.478 0.00 0.00 0.00 2.90
4774 5676 4.082571 ACAAAGGCGATACTTACGTACACT 60.083 41.667 0.00 0.00 0.00 3.55
4775 5677 3.687572 AGGCGATACTTACGTACACTG 57.312 47.619 0.00 0.00 0.00 3.66
4776 5678 2.114825 GGCGATACTTACGTACACTGC 58.885 52.381 0.00 0.00 0.00 4.40
4777 5679 2.223433 GGCGATACTTACGTACACTGCT 60.223 50.000 0.00 0.00 0.00 4.24
4778 5680 3.432782 GCGATACTTACGTACACTGCTT 58.567 45.455 0.00 0.00 0.00 3.91
4779 5681 3.239941 GCGATACTTACGTACACTGCTTG 59.760 47.826 0.00 0.00 0.00 4.01
4780 5682 3.239941 CGATACTTACGTACACTGCTTGC 59.760 47.826 0.00 0.00 0.00 4.01
4781 5683 2.519377 ACTTACGTACACTGCTTGCA 57.481 45.000 0.00 0.00 0.00 4.08
4782 5684 3.040147 ACTTACGTACACTGCTTGCAT 57.960 42.857 0.00 0.00 0.00 3.96
4783 5685 4.182693 ACTTACGTACACTGCTTGCATA 57.817 40.909 0.00 0.00 0.00 3.14
4784 5686 4.755411 ACTTACGTACACTGCTTGCATAT 58.245 39.130 0.00 0.00 0.00 1.78
4785 5687 5.898174 ACTTACGTACACTGCTTGCATATA 58.102 37.500 0.00 0.00 0.00 0.86
4786 5688 6.513180 ACTTACGTACACTGCTTGCATATAT 58.487 36.000 0.00 0.00 0.00 0.86
4787 5689 7.654568 ACTTACGTACACTGCTTGCATATATA 58.345 34.615 0.00 0.00 0.00 0.86
4788 5690 7.808381 ACTTACGTACACTGCTTGCATATATAG 59.192 37.037 0.00 0.00 0.00 1.31
4789 5691 6.085555 ACGTACACTGCTTGCATATATAGT 57.914 37.500 0.00 0.00 0.00 2.12
4790 5692 7.210718 ACGTACACTGCTTGCATATATAGTA 57.789 36.000 0.00 0.00 0.00 1.82
4791 5693 7.306213 ACGTACACTGCTTGCATATATAGTAG 58.694 38.462 0.00 0.00 0.00 2.57
4792 5694 6.251589 CGTACACTGCTTGCATATATAGTAGC 59.748 42.308 0.91 0.00 0.00 3.58
4793 5695 6.352016 ACACTGCTTGCATATATAGTAGCT 57.648 37.500 4.55 0.00 0.00 3.32
4794 5696 7.468141 ACACTGCTTGCATATATAGTAGCTA 57.532 36.000 4.55 0.00 0.00 3.32
4795 5697 8.072321 ACACTGCTTGCATATATAGTAGCTAT 57.928 34.615 0.00 0.00 0.00 2.97
4796 5698 8.194104 ACACTGCTTGCATATATAGTAGCTATC 58.806 37.037 0.00 0.00 0.00 2.08
4797 5699 8.412456 CACTGCTTGCATATATAGTAGCTATCT 58.588 37.037 0.00 0.00 0.00 1.98
4798 5700 8.412456 ACTGCTTGCATATATAGTAGCTATCTG 58.588 37.037 0.00 0.00 0.00 2.90
4799 5701 7.205992 TGCTTGCATATATAGTAGCTATCTGC 58.794 38.462 0.00 0.00 43.29 4.26
4800 5702 6.644592 GCTTGCATATATAGTAGCTATCTGCC 59.355 42.308 0.00 0.00 44.23 4.85
4801 5703 7.471260 GCTTGCATATATAGTAGCTATCTGCCT 60.471 40.741 0.00 0.00 44.23 4.75
4802 5704 7.282332 TGCATATATAGTAGCTATCTGCCTG 57.718 40.000 0.00 0.00 44.23 4.85
4803 5705 7.062957 TGCATATATAGTAGCTATCTGCCTGA 58.937 38.462 0.00 0.00 44.23 3.86
4804 5706 7.727634 TGCATATATAGTAGCTATCTGCCTGAT 59.272 37.037 0.00 0.00 44.23 2.90
4805 5707 8.584157 GCATATATAGTAGCTATCTGCCTGATT 58.416 37.037 0.00 0.00 44.23 2.57
4809 5711 5.975693 AGTAGCTATCTGCCTGATTAGAC 57.024 43.478 0.00 0.00 44.23 2.59
4810 5712 3.932545 AGCTATCTGCCTGATTAGACG 57.067 47.619 0.00 0.00 44.23 4.18
4811 5713 3.226777 AGCTATCTGCCTGATTAGACGT 58.773 45.455 0.00 0.00 44.23 4.34
4812 5714 3.639094 AGCTATCTGCCTGATTAGACGTT 59.361 43.478 0.00 0.00 44.23 3.99
4813 5715 3.738282 GCTATCTGCCTGATTAGACGTTG 59.262 47.826 0.00 0.00 36.65 4.10
4814 5716 2.010145 TCTGCCTGATTAGACGTTGC 57.990 50.000 0.00 0.00 0.00 4.17
4815 5717 1.275010 TCTGCCTGATTAGACGTTGCA 59.725 47.619 0.00 0.00 0.00 4.08
4816 5718 1.394917 CTGCCTGATTAGACGTTGCAC 59.605 52.381 0.00 0.00 0.00 4.57
4817 5719 0.727398 GCCTGATTAGACGTTGCACC 59.273 55.000 0.00 0.00 0.00 5.01
4818 5720 1.943968 GCCTGATTAGACGTTGCACCA 60.944 52.381 0.00 0.00 0.00 4.17
4819 5721 2.632377 CCTGATTAGACGTTGCACCAT 58.368 47.619 0.00 0.00 0.00 3.55
4820 5722 2.352651 CCTGATTAGACGTTGCACCATG 59.647 50.000 0.00 0.00 0.00 3.66
4821 5723 1.737236 TGATTAGACGTTGCACCATGC 59.263 47.619 0.00 0.00 45.29 4.06
4830 5732 2.101575 GCACCATGCATCGCACAG 59.898 61.111 0.00 0.00 43.04 3.66
4831 5733 2.101575 CACCATGCATCGCACAGC 59.898 61.111 0.00 0.00 43.04 4.40
4832 5734 2.360225 ACCATGCATCGCACAGCA 60.360 55.556 0.00 0.00 43.04 4.41
4833 5735 2.101575 CCATGCATCGCACAGCAC 59.898 61.111 0.00 0.00 43.04 4.40
4834 5736 2.101575 CATGCATCGCACAGCACC 59.898 61.111 0.00 0.00 43.04 5.01
4835 5737 2.360225 ATGCATCGCACAGCACCA 60.360 55.556 0.00 0.00 43.04 4.17
4836 5738 2.404186 ATGCATCGCACAGCACCAG 61.404 57.895 0.00 0.00 43.04 4.00
4837 5739 4.471726 GCATCGCACAGCACCAGC 62.472 66.667 0.00 0.00 42.56 4.85
4848 5750 4.435436 CACCAGCTAGCGGTCGCA 62.435 66.667 22.85 3.09 44.88 5.10
4849 5751 4.135153 ACCAGCTAGCGGTCGCAG 62.135 66.667 20.83 12.85 44.88 5.18
4850 5752 4.135153 CCAGCTAGCGGTCGCAGT 62.135 66.667 17.71 0.19 44.88 4.40
4851 5753 2.580867 CAGCTAGCGGTCGCAGTC 60.581 66.667 17.71 5.53 44.88 3.51
4852 5754 4.180946 AGCTAGCGGTCGCAGTCG 62.181 66.667 17.71 3.88 44.88 4.18
4858 5760 2.202557 CGGTCGCAGTCGCACATA 60.203 61.111 0.00 0.00 38.40 2.29
4859 5761 1.588932 CGGTCGCAGTCGCACATAT 60.589 57.895 0.00 0.00 38.40 1.78
4860 5762 1.811217 CGGTCGCAGTCGCACATATG 61.811 60.000 0.00 0.00 38.40 1.78
4861 5763 0.806102 GGTCGCAGTCGCACATATGT 60.806 55.000 1.41 1.41 38.40 2.29
4875 5777 3.628008 ACATATGTGTGTACTCCGAGGA 58.372 45.455 7.78 0.00 37.14 3.71
4876 5778 4.021229 ACATATGTGTGTACTCCGAGGAA 58.979 43.478 7.78 0.00 37.14 3.36
4877 5779 4.649674 ACATATGTGTGTACTCCGAGGAAT 59.350 41.667 7.78 0.00 37.14 3.01
4878 5780 3.802948 ATGTGTGTACTCCGAGGAATC 57.197 47.619 0.00 0.00 0.00 2.52
4879 5781 2.803956 TGTGTGTACTCCGAGGAATCT 58.196 47.619 0.00 0.00 0.00 2.40
4880 5782 2.753452 TGTGTGTACTCCGAGGAATCTC 59.247 50.000 0.00 0.00 36.69 2.75
4888 5790 3.621394 GAGGAATCTCGTGCGCGC 61.621 66.667 27.26 27.26 38.14 6.86
4889 5791 4.435436 AGGAATCTCGTGCGCGCA 62.435 61.111 33.09 33.09 38.14 6.09
4890 5792 4.210304 GGAATCTCGTGCGCGCAC 62.210 66.667 45.38 45.38 43.01 5.34
4910 5812 2.875080 GTACACACGAAGGCATGTTC 57.125 50.000 0.00 0.00 0.00 3.18
4911 5813 1.463444 GTACACACGAAGGCATGTTCC 59.537 52.381 0.00 0.00 0.00 3.62
4912 5814 0.108585 ACACACGAAGGCATGTTCCT 59.891 50.000 0.00 0.00 38.31 3.36
4913 5815 0.798776 CACACGAAGGCATGTTCCTC 59.201 55.000 0.00 0.00 34.82 3.71
4914 5816 0.321653 ACACGAAGGCATGTTCCTCC 60.322 55.000 0.00 0.00 34.82 4.30
4915 5817 0.036010 CACGAAGGCATGTTCCTCCT 60.036 55.000 0.00 0.00 34.82 3.69
4916 5818 0.250513 ACGAAGGCATGTTCCTCCTC 59.749 55.000 0.00 0.00 34.82 3.71
4917 5819 0.462759 CGAAGGCATGTTCCTCCTCC 60.463 60.000 0.00 0.00 34.82 4.30
4918 5820 0.915364 GAAGGCATGTTCCTCCTCCT 59.085 55.000 0.00 0.00 34.82 3.69
4919 5821 2.119495 GAAGGCATGTTCCTCCTCCTA 58.881 52.381 0.00 0.00 34.82 2.94
4920 5822 1.501582 AGGCATGTTCCTCCTCCTAC 58.498 55.000 0.00 0.00 0.00 3.18
4921 5823 0.105039 GGCATGTTCCTCCTCCTACG 59.895 60.000 0.00 0.00 0.00 3.51
4922 5824 0.824759 GCATGTTCCTCCTCCTACGT 59.175 55.000 0.00 0.00 0.00 3.57
4923 5825 1.207329 GCATGTTCCTCCTCCTACGTT 59.793 52.381 0.00 0.00 0.00 3.99
4924 5826 2.354805 GCATGTTCCTCCTCCTACGTTT 60.355 50.000 0.00 0.00 0.00 3.60
4925 5827 3.118884 GCATGTTCCTCCTCCTACGTTTA 60.119 47.826 0.00 0.00 0.00 2.01
4926 5828 4.683832 CATGTTCCTCCTCCTACGTTTAG 58.316 47.826 0.00 0.00 0.00 1.85
4927 5829 2.494870 TGTTCCTCCTCCTACGTTTAGC 59.505 50.000 0.00 0.00 0.00 3.09
4928 5830 2.494870 GTTCCTCCTCCTACGTTTAGCA 59.505 50.000 0.00 0.00 0.00 3.49
4929 5831 2.097825 TCCTCCTCCTACGTTTAGCAC 58.902 52.381 0.00 0.00 0.00 4.40
4937 5839 3.165498 CGTTTAGCACGGCAGGAC 58.835 61.111 0.00 0.00 45.89 3.85
4938 5840 2.388232 CGTTTAGCACGGCAGGACC 61.388 63.158 0.00 0.00 45.89 4.46
4939 5841 1.302192 GTTTAGCACGGCAGGACCA 60.302 57.895 0.00 0.00 39.03 4.02
4940 5842 1.302192 TTTAGCACGGCAGGACCAC 60.302 57.895 0.00 0.00 39.03 4.16
4941 5843 2.741486 TTTAGCACGGCAGGACCACC 62.741 60.000 0.00 0.00 39.03 4.61
4944 5846 3.941188 CACGGCAGGACCACCACT 61.941 66.667 4.59 0.00 39.03 4.00
4945 5847 3.626924 ACGGCAGGACCACCACTC 61.627 66.667 4.59 0.00 39.03 3.51
4946 5848 4.394712 CGGCAGGACCACCACTCC 62.395 72.222 4.59 0.00 39.03 3.85
4947 5849 4.394712 GGCAGGACCACCACTCCG 62.395 72.222 0.00 0.00 38.86 4.63
4949 5851 4.394712 CAGGACCACCACTCCGCC 62.395 72.222 0.00 0.00 38.94 6.13
4950 5852 4.954118 AGGACCACCACTCCGCCA 62.954 66.667 0.00 0.00 38.94 5.69
4951 5853 4.394712 GGACCACCACTCCGCCAG 62.395 72.222 0.00 0.00 35.97 4.85
4954 5856 4.641645 CCACCACTCCGCCAGCAA 62.642 66.667 0.00 0.00 0.00 3.91
4955 5857 3.357079 CACCACTCCGCCAGCAAC 61.357 66.667 0.00 0.00 0.00 4.17
4956 5858 4.988598 ACCACTCCGCCAGCAACG 62.989 66.667 0.00 0.00 0.00 4.10
4959 5861 4.704833 ACTCCGCCAGCAACGCAT 62.705 61.111 0.00 0.00 0.00 4.73
4960 5862 4.170062 CTCCGCCAGCAACGCATG 62.170 66.667 0.00 0.00 0.00 4.06
4962 5864 4.041917 CCGCCAGCAACGCATGTT 62.042 61.111 0.00 0.00 39.43 2.71
4963 5865 2.502510 CGCCAGCAACGCATGTTC 60.503 61.111 0.00 0.00 35.72 3.18
4964 5866 2.644418 GCCAGCAACGCATGTTCA 59.356 55.556 0.00 0.00 35.72 3.18
4965 5867 1.730547 GCCAGCAACGCATGTTCAC 60.731 57.895 0.00 0.00 35.72 3.18
4966 5868 1.951510 CCAGCAACGCATGTTCACT 59.048 52.632 0.00 0.00 35.72 3.41
4967 5869 0.311790 CCAGCAACGCATGTTCACTT 59.688 50.000 0.00 0.00 35.72 3.16
4968 5870 1.401530 CAGCAACGCATGTTCACTTG 58.598 50.000 0.00 0.00 35.72 3.16
4969 5871 0.311790 AGCAACGCATGTTCACTTGG 59.688 50.000 0.00 0.00 35.72 3.61
4970 5872 0.030638 GCAACGCATGTTCACTTGGT 59.969 50.000 0.00 0.00 35.72 3.67
4971 5873 1.925946 GCAACGCATGTTCACTTGGTC 60.926 52.381 0.00 0.00 35.72 4.02
4972 5874 1.333308 CAACGCATGTTCACTTGGTCA 59.667 47.619 0.00 0.00 35.72 4.02
4973 5875 1.229428 ACGCATGTTCACTTGGTCAG 58.771 50.000 0.00 0.00 0.00 3.51
4974 5876 0.518636 CGCATGTTCACTTGGTCAGG 59.481 55.000 0.00 0.00 0.00 3.86
4975 5877 0.242017 GCATGTTCACTTGGTCAGGC 59.758 55.000 0.00 0.00 0.00 4.85
4976 5878 1.608055 CATGTTCACTTGGTCAGGCA 58.392 50.000 0.00 0.00 0.00 4.75
4977 5879 1.538512 CATGTTCACTTGGTCAGGCAG 59.461 52.381 0.00 0.00 0.00 4.85
4978 5880 0.179020 TGTTCACTTGGTCAGGCAGG 60.179 55.000 0.00 0.00 0.00 4.85
4979 5881 1.228245 TTCACTTGGTCAGGCAGGC 60.228 57.895 0.00 0.00 0.00 4.85
4980 5882 2.674380 CACTTGGTCAGGCAGGCC 60.674 66.667 0.97 0.97 44.53 5.19
4992 5894 4.750460 CAGGCCATGCATGCAATC 57.250 55.556 26.68 15.82 32.64 2.67
4993 5895 2.124293 CAGGCCATGCATGCAATCT 58.876 52.632 26.68 15.96 32.64 2.40
4994 5896 0.249447 CAGGCCATGCATGCAATCTG 60.249 55.000 26.68 22.60 32.64 2.90
4995 5897 1.069090 GGCCATGCATGCAATCTGG 59.931 57.895 27.39 27.39 0.00 3.86
4996 5898 1.594293 GCCATGCATGCAATCTGGC 60.594 57.895 35.52 35.52 40.79 4.85
4997 5899 1.299850 CCATGCATGCAATCTGGCG 60.300 57.895 26.68 7.10 36.28 5.69
4998 5900 1.730451 CCATGCATGCAATCTGGCGA 61.730 55.000 26.68 0.00 36.28 5.54
4999 5901 0.317854 CATGCATGCAATCTGGCGAG 60.318 55.000 26.68 2.53 36.28 5.03
5000 5902 2.025727 GCATGCAATCTGGCGAGC 59.974 61.111 14.21 0.00 36.28 5.03
5001 5903 2.326897 CATGCAATCTGGCGAGCG 59.673 61.111 0.00 0.00 36.28 5.03
5002 5904 2.124983 ATGCAATCTGGCGAGCGT 60.125 55.556 0.00 0.00 36.28 5.07
5003 5905 1.143838 ATGCAATCTGGCGAGCGTA 59.856 52.632 0.00 0.00 36.28 4.42
5004 5906 1.154205 ATGCAATCTGGCGAGCGTAC 61.154 55.000 0.00 0.00 36.28 3.67
5005 5907 2.860628 GCAATCTGGCGAGCGTACG 61.861 63.158 11.84 11.84 0.00 3.67
5006 5908 1.226575 CAATCTGGCGAGCGTACGA 60.227 57.895 21.65 0.00 35.09 3.43
5007 5909 0.800683 CAATCTGGCGAGCGTACGAA 60.801 55.000 21.65 0.00 35.09 3.85
5008 5910 0.801067 AATCTGGCGAGCGTACGAAC 60.801 55.000 21.65 10.66 35.09 3.95
5009 5911 2.609183 ATCTGGCGAGCGTACGAACC 62.609 60.000 21.65 13.88 35.09 3.62
5010 5912 4.424566 TGGCGAGCGTACGAACCC 62.425 66.667 21.65 13.05 35.09 4.11
5012 5914 4.424566 GCGAGCGTACGAACCCCA 62.425 66.667 21.65 0.00 35.09 4.96
5013 5915 2.493030 CGAGCGTACGAACCCCAT 59.507 61.111 21.65 0.00 35.09 4.00
5014 5916 1.588139 CGAGCGTACGAACCCCATC 60.588 63.158 21.65 0.00 35.09 3.51
5016 5918 1.996786 GAGCGTACGAACCCCATCGA 61.997 60.000 21.65 0.00 45.48 3.59
5017 5919 1.875364 GCGTACGAACCCCATCGAC 60.875 63.158 21.65 0.00 45.48 4.20
5018 5920 1.584483 CGTACGAACCCCATCGACG 60.584 63.158 10.44 5.69 45.48 5.12
5019 5921 1.802636 GTACGAACCCCATCGACGA 59.197 57.895 0.00 0.00 45.48 4.20
5020 5922 0.383231 GTACGAACCCCATCGACGAT 59.617 55.000 4.05 4.05 45.48 3.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.065925 GTGATTTTGTCCTAGCTGATGGC 59.934 47.826 0.00 0.00 42.19 4.40
2 3 4.334759 CAGTGATTTTGTCCTAGCTGATGG 59.665 45.833 0.00 0.00 0.00 3.51
3 4 4.940046 ACAGTGATTTTGTCCTAGCTGATG 59.060 41.667 0.00 0.00 0.00 3.07
4 5 5.171339 ACAGTGATTTTGTCCTAGCTGAT 57.829 39.130 0.00 0.00 0.00 2.90
6 7 5.695851 AAACAGTGATTTTGTCCTAGCTG 57.304 39.130 0.00 0.00 0.00 4.24
7 8 5.827797 TCAAAACAGTGATTTTGTCCTAGCT 59.172 36.000 20.47 0.00 45.67 3.32
8 9 6.072112 TCAAAACAGTGATTTTGTCCTAGC 57.928 37.500 20.47 0.00 45.67 3.42
9 10 7.707104 AGTTCAAAACAGTGATTTTGTCCTAG 58.293 34.615 20.47 2.46 45.67 3.02
10 11 7.639113 AGTTCAAAACAGTGATTTTGTCCTA 57.361 32.000 20.47 7.69 45.67 2.94
11 12 6.530019 AGTTCAAAACAGTGATTTTGTCCT 57.470 33.333 20.47 16.41 45.67 3.85
32 33 6.538945 TCCTGCTTAACTTTTCCAAAAAGT 57.461 33.333 11.09 11.09 41.82 2.66
88 89 1.879380 CAGGCGTGATGAAAAAGGTCA 59.121 47.619 0.00 0.00 0.00 4.02
126 127 0.750546 ACGAGGCGCTATAGTGTGGA 60.751 55.000 14.57 0.00 0.00 4.02
393 409 1.436983 GATGGGCGACGAAATCCACC 61.437 60.000 0.00 0.00 31.48 4.61
734 1083 6.608539 ATCAGATCATAGCTAATGCAGTCT 57.391 37.500 0.00 0.00 42.74 3.24
781 1131 2.490903 GACTACTCTTTCAGCGGGTGTA 59.509 50.000 7.12 0.00 0.00 2.90
1003 1353 3.889538 TGTATTACCTGTCTCTCATCCGG 59.110 47.826 0.00 0.00 0.00 5.14
1078 1428 6.949352 ACTGACAGATTCATTTGAACACTT 57.051 33.333 10.08 0.00 36.80 3.16
1185 1535 0.323629 CGCAGGGGACAAAAGACCTA 59.676 55.000 0.00 0.00 0.00 3.08
1570 1921 1.582502 GCTATTAGCGGCGTTATAGCG 59.417 52.381 23.43 4.42 37.00 4.26
1571 1922 2.344741 GTGCTATTAGCGGCGTTATAGC 59.655 50.000 27.31 27.31 46.26 2.97
1572 1923 2.592897 CGTGCTATTAGCGGCGTTATAG 59.407 50.000 18.29 13.57 46.26 1.31
1573 1924 2.587956 CGTGCTATTAGCGGCGTTATA 58.412 47.619 18.29 3.30 46.26 0.98
1574 1925 1.415374 CGTGCTATTAGCGGCGTTAT 58.585 50.000 18.29 2.16 46.26 1.89
1575 1926 1.210545 GCGTGCTATTAGCGGCGTTA 61.211 55.000 23.58 3.34 46.26 3.18
1576 1927 2.522638 GCGTGCTATTAGCGGCGTT 61.523 57.895 23.58 4.68 46.26 4.84
1577 1928 2.067091 TAGCGTGCTATTAGCGGCGT 62.067 55.000 23.58 16.42 46.26 5.68
1578 1929 0.732880 ATAGCGTGCTATTAGCGGCG 60.733 55.000 20.72 20.72 46.26 6.46
1579 1930 2.186076 CTATAGCGTGCTATTAGCGGC 58.814 52.381 18.62 18.55 46.26 6.53
1580 1931 2.186076 GCTATAGCGTGCTATTAGCGG 58.814 52.381 18.62 6.68 46.26 5.52
1581 1932 2.863739 TGCTATAGCGTGCTATTAGCG 58.136 47.619 18.62 7.48 44.30 4.26
1591 1942 6.015856 AGACAATTCTCTACATGCTATAGCGT 60.016 38.462 19.55 16.84 45.83 5.07
1592 1943 6.385843 AGACAATTCTCTACATGCTATAGCG 58.614 40.000 19.55 9.00 45.83 4.26
1593 1944 6.526325 CGAGACAATTCTCTACATGCTATAGC 59.474 42.308 18.18 18.18 45.61 2.97
1594 1945 6.526325 GCGAGACAATTCTCTACATGCTATAG 59.474 42.308 0.00 0.00 45.61 1.31
1595 1946 6.207614 AGCGAGACAATTCTCTACATGCTATA 59.792 38.462 0.00 0.00 45.61 1.31
1596 1947 5.010516 AGCGAGACAATTCTCTACATGCTAT 59.989 40.000 0.00 0.00 45.61 2.97
1597 1948 4.339530 AGCGAGACAATTCTCTACATGCTA 59.660 41.667 0.00 0.00 45.61 3.49
1598 1949 3.131933 AGCGAGACAATTCTCTACATGCT 59.868 43.478 0.00 0.00 45.61 3.79
1599 1950 3.452474 AGCGAGACAATTCTCTACATGC 58.548 45.455 0.00 0.00 45.61 4.06
1600 1951 7.706281 ATTTAGCGAGACAATTCTCTACATG 57.294 36.000 0.00 0.00 45.61 3.21
1601 1952 9.817809 TTTATTTAGCGAGACAATTCTCTACAT 57.182 29.630 0.46 0.00 45.61 2.29
1602 1953 9.817809 ATTTATTTAGCGAGACAATTCTCTACA 57.182 29.630 0.46 0.00 45.61 2.74
1627 1978 9.367444 GCTATTAGCGAGGTATTGTACATTAAT 57.633 33.333 0.00 0.00 0.00 1.40
1628 1979 8.361889 TGCTATTAGCGAGGTATTGTACATTAA 58.638 33.333 10.94 0.00 46.26 1.40
1629 1980 7.811236 GTGCTATTAGCGAGGTATTGTACATTA 59.189 37.037 10.94 0.00 46.26 1.90
1630 1981 6.645415 GTGCTATTAGCGAGGTATTGTACATT 59.355 38.462 10.94 0.00 46.26 2.71
1631 1982 6.157211 GTGCTATTAGCGAGGTATTGTACAT 58.843 40.000 10.94 0.00 46.26 2.29
1632 1983 5.526115 GTGCTATTAGCGAGGTATTGTACA 58.474 41.667 10.94 0.00 46.26 2.90
1633 1984 4.615961 CGTGCTATTAGCGAGGTATTGTAC 59.384 45.833 10.94 0.00 46.26 2.90
1634 1985 4.790878 CGTGCTATTAGCGAGGTATTGTA 58.209 43.478 10.94 0.00 46.26 2.41
1635 1986 3.639538 CGTGCTATTAGCGAGGTATTGT 58.360 45.455 10.94 0.00 46.26 2.71
1636 1987 2.408704 GCGTGCTATTAGCGAGGTATTG 59.591 50.000 10.94 0.00 46.26 1.90
1637 1988 2.296471 AGCGTGCTATTAGCGAGGTATT 59.704 45.455 10.94 0.00 46.26 1.89
1638 1989 1.887198 AGCGTGCTATTAGCGAGGTAT 59.113 47.619 10.94 0.00 46.26 2.73
1639 1990 1.315690 AGCGTGCTATTAGCGAGGTA 58.684 50.000 10.94 0.00 46.26 3.08
1640 1991 1.315690 TAGCGTGCTATTAGCGAGGT 58.684 50.000 10.94 13.70 46.26 3.85
1641 1992 2.638556 ATAGCGTGCTATTAGCGAGG 57.361 50.000 8.54 7.17 46.26 4.63
1642 1993 4.343811 ACTATAGCGTGCTATTAGCGAG 57.656 45.455 18.62 12.10 46.26 5.03
1643 1994 4.201656 CGTACTATAGCGTGCTATTAGCGA 60.202 45.833 18.62 0.92 46.26 4.93
1644 1995 4.020518 CGTACTATAGCGTGCTATTAGCG 58.979 47.826 18.62 13.86 46.26 4.26
1645 1996 3.784994 GCGTACTATAGCGTGCTATTAGC 59.215 47.826 18.62 8.80 42.82 3.09
1646 1997 5.219226 AGCGTACTATAGCGTGCTATTAG 57.781 43.478 18.62 14.98 39.65 1.73
1647 1998 6.726258 TTAGCGTACTATAGCGTGCTATTA 57.274 37.500 18.62 4.68 39.65 0.98
1648 1999 5.618056 TTAGCGTACTATAGCGTGCTATT 57.382 39.130 18.62 5.61 39.65 1.73
1649 2000 5.814764 ATTAGCGTACTATAGCGTGCTAT 57.185 39.130 17.65 17.65 41.58 2.97
1650 2001 5.220548 GCTATTAGCGTACTATAGCGTGCTA 60.221 44.000 13.44 13.44 38.61 3.49
1651 2002 4.437121 GCTATTAGCGTACTATAGCGTGCT 60.437 45.833 15.02 15.02 38.61 4.40
1652 2003 3.784994 GCTATTAGCGTACTATAGCGTGC 59.215 47.826 0.00 1.06 38.61 5.34
1653 2004 4.966249 TGCTATTAGCGTACTATAGCGTG 58.034 43.478 10.94 0.00 46.26 5.34
1654 2005 5.814764 ATGCTATTAGCGTACTATAGCGT 57.185 39.130 8.66 13.56 46.26 5.07
1655 2006 8.783999 AAATATGCTATTAGCGTACTATAGCG 57.216 34.615 17.67 0.00 44.58 4.26
1660 2011 9.841880 CTCTGAAAATATGCTATTAGCGTACTA 57.158 33.333 17.67 1.08 44.58 1.82
1661 2012 7.815068 CCTCTGAAAATATGCTATTAGCGTACT 59.185 37.037 17.67 6.42 44.58 2.73
1662 2013 7.412020 GCCTCTGAAAATATGCTATTAGCGTAC 60.412 40.741 17.67 7.72 44.58 3.67
1663 2014 6.590292 GCCTCTGAAAATATGCTATTAGCGTA 59.410 38.462 17.64 17.64 46.26 4.42
1664 2015 5.409826 GCCTCTGAAAATATGCTATTAGCGT 59.590 40.000 14.53 14.53 46.26 5.07
1665 2016 5.445142 CGCCTCTGAAAATATGCTATTAGCG 60.445 44.000 10.94 0.00 46.26 4.26
1666 2017 5.639506 TCGCCTCTGAAAATATGCTATTAGC 59.360 40.000 8.80 8.80 42.82 3.09
1667 2018 6.183360 CGTCGCCTCTGAAAATATGCTATTAG 60.183 42.308 0.00 0.00 0.00 1.73
1668 2019 5.633601 CGTCGCCTCTGAAAATATGCTATTA 59.366 40.000 0.00 0.00 0.00 0.98
1669 2020 4.449068 CGTCGCCTCTGAAAATATGCTATT 59.551 41.667 0.00 0.00 0.00 1.73
1670 2021 3.990469 CGTCGCCTCTGAAAATATGCTAT 59.010 43.478 0.00 0.00 0.00 2.97
1671 2022 3.381045 CGTCGCCTCTGAAAATATGCTA 58.619 45.455 0.00 0.00 0.00 3.49
1672 2023 2.205074 CGTCGCCTCTGAAAATATGCT 58.795 47.619 0.00 0.00 0.00 3.79
1673 2024 1.333258 GCGTCGCCTCTGAAAATATGC 60.333 52.381 5.75 0.00 0.00 3.14
1674 2025 2.205074 AGCGTCGCCTCTGAAAATATG 58.795 47.619 14.86 0.00 0.00 1.78
1675 2026 2.604046 AGCGTCGCCTCTGAAAATAT 57.396 45.000 14.86 0.00 0.00 1.28
1676 2027 3.728076 ATAGCGTCGCCTCTGAAAATA 57.272 42.857 14.86 0.00 0.00 1.40
1677 2028 2.604046 ATAGCGTCGCCTCTGAAAAT 57.396 45.000 14.86 0.00 0.00 1.82
1678 2029 2.380084 AATAGCGTCGCCTCTGAAAA 57.620 45.000 14.86 0.00 0.00 2.29
1679 2030 2.380084 AAATAGCGTCGCCTCTGAAA 57.620 45.000 14.86 0.00 0.00 2.69
1680 2031 2.380084 AAAATAGCGTCGCCTCTGAA 57.620 45.000 14.86 0.00 0.00 3.02
1681 2032 1.999735 CAAAAATAGCGTCGCCTCTGA 59.000 47.619 14.86 0.00 0.00 3.27
1682 2033 1.732259 ACAAAAATAGCGTCGCCTCTG 59.268 47.619 14.86 5.76 0.00 3.35
1683 2034 2.094762 ACAAAAATAGCGTCGCCTCT 57.905 45.000 14.86 0.00 0.00 3.69
1684 2035 2.285660 GCTACAAAAATAGCGTCGCCTC 60.286 50.000 14.86 0.00 38.37 4.70
1685 2036 1.664151 GCTACAAAAATAGCGTCGCCT 59.336 47.619 14.86 3.94 38.37 5.52
1686 2037 2.086934 GCTACAAAAATAGCGTCGCC 57.913 50.000 14.86 0.00 38.37 5.54
1692 2043 7.506296 AAAAATAGCGTGCTACAAAAATAGC 57.494 32.000 3.26 0.00 46.58 2.97
1713 2064 6.983890 GGACTCTGTTTTTAGCAATGGAAAAA 59.016 34.615 0.00 0.00 33.32 1.94
1714 2065 6.462347 GGGACTCTGTTTTTAGCAATGGAAAA 60.462 38.462 0.00 0.00 0.00 2.29
1715 2066 5.010617 GGGACTCTGTTTTTAGCAATGGAAA 59.989 40.000 0.00 0.00 0.00 3.13
1716 2067 4.522789 GGGACTCTGTTTTTAGCAATGGAA 59.477 41.667 0.00 0.00 0.00 3.53
1717 2068 4.079253 GGGACTCTGTTTTTAGCAATGGA 58.921 43.478 0.00 0.00 0.00 3.41
1718 2069 3.193479 GGGGACTCTGTTTTTAGCAATGG 59.807 47.826 0.00 0.00 0.00 3.16
1719 2070 3.119849 CGGGGACTCTGTTTTTAGCAATG 60.120 47.826 0.00 0.00 0.00 2.82
1720 2071 3.081804 CGGGGACTCTGTTTTTAGCAAT 58.918 45.455 0.00 0.00 0.00 3.56
1721 2072 2.500229 CGGGGACTCTGTTTTTAGCAA 58.500 47.619 0.00 0.00 0.00 3.91
1722 2073 1.880646 GCGGGGACTCTGTTTTTAGCA 60.881 52.381 0.00 0.00 0.00 3.49
1723 2074 0.803117 GCGGGGACTCTGTTTTTAGC 59.197 55.000 0.00 0.00 0.00 3.09
2172 2524 2.092212 GGTTGTCATGATCATCCCAGGT 60.092 50.000 4.86 0.00 0.00 4.00
2237 2589 3.240670 TGGGTCACCAGTGAACTCT 57.759 52.632 15.07 0.00 46.15 3.24
2303 2655 6.699575 AACATGACAATTATTACCTGCTCC 57.300 37.500 0.00 0.00 0.00 4.70
2483 2951 3.007831 GGGATGAAAGCAAAATTGTCCCA 59.992 43.478 10.70 0.00 42.83 4.37
2896 3367 7.760794 TCGCTAAGAAACCAACGAAGATATTTA 59.239 33.333 0.00 0.00 0.00 1.40
3287 4134 5.390461 GCTACACTGTGACATTGCGAAATAA 60.390 40.000 15.86 0.00 0.00 1.40
3499 4350 5.731957 ATACATATATACGGGTGCACACA 57.268 39.130 21.13 0.00 0.00 3.72
3500 4351 7.274904 CACTTATACATATATACGGGTGCACAC 59.725 40.741 20.43 15.50 0.00 3.82
3760 4626 3.691020 GCATCATCCATAAACCCCCTCAA 60.691 47.826 0.00 0.00 0.00 3.02
3948 4837 0.977395 CGACCCTCTTCAACCTCCTT 59.023 55.000 0.00 0.00 0.00 3.36
4328 5226 2.138320 CTTCATACCATAGCGCCACTG 58.862 52.381 2.29 0.00 0.00 3.66
4415 5313 2.472861 CACATTATAGCGCCTCAACTCG 59.527 50.000 2.29 0.00 0.00 4.18
4557 5459 2.011046 GCTCCAAGTTGCCTCTAGCTG 61.011 57.143 0.00 0.00 44.23 4.24
4558 5460 0.251634 GCTCCAAGTTGCCTCTAGCT 59.748 55.000 0.00 0.00 44.23 3.32
4559 5461 0.251634 AGCTCCAAGTTGCCTCTAGC 59.748 55.000 0.00 1.33 44.14 3.42
4560 5462 3.494048 CCATAGCTCCAAGTTGCCTCTAG 60.494 52.174 0.00 0.00 0.00 2.43
4561 5463 2.435805 CCATAGCTCCAAGTTGCCTCTA 59.564 50.000 0.00 0.00 0.00 2.43
4562 5464 1.211457 CCATAGCTCCAAGTTGCCTCT 59.789 52.381 0.00 0.00 0.00 3.69
4563 5465 1.673168 CCATAGCTCCAAGTTGCCTC 58.327 55.000 0.00 0.00 0.00 4.70
4564 5466 0.394899 GCCATAGCTCCAAGTTGCCT 60.395 55.000 0.00 0.00 35.50 4.75
4565 5467 1.718757 CGCCATAGCTCCAAGTTGCC 61.719 60.000 0.00 0.00 36.60 4.52
4566 5468 1.718757 CCGCCATAGCTCCAAGTTGC 61.719 60.000 0.00 0.00 36.60 4.17
4567 5469 1.718757 GCCGCCATAGCTCCAAGTTG 61.719 60.000 0.00 0.00 36.60 3.16
4568 5470 1.452108 GCCGCCATAGCTCCAAGTT 60.452 57.895 0.00 0.00 36.60 2.66
4569 5471 2.190578 GCCGCCATAGCTCCAAGT 59.809 61.111 0.00 0.00 36.60 3.16
4570 5472 1.890979 CAGCCGCCATAGCTCCAAG 60.891 63.158 0.00 0.00 38.95 3.61
4571 5473 2.190313 CAGCCGCCATAGCTCCAA 59.810 61.111 0.00 0.00 38.95 3.53
4572 5474 2.669133 AACAGCCGCCATAGCTCCA 61.669 57.895 0.00 0.00 38.95 3.86
4573 5475 2.182842 CAACAGCCGCCATAGCTCC 61.183 63.158 0.00 0.00 38.95 4.70
4574 5476 0.179084 TACAACAGCCGCCATAGCTC 60.179 55.000 0.00 0.00 38.95 4.09
4575 5477 0.179073 CTACAACAGCCGCCATAGCT 60.179 55.000 0.00 0.00 42.70 3.32
4576 5478 1.776034 GCTACAACAGCCGCCATAGC 61.776 60.000 0.00 0.00 45.23 2.97
4577 5479 2.311294 GCTACAACAGCCGCCATAG 58.689 57.895 0.00 0.00 45.23 2.23
4578 5480 4.532490 GCTACAACAGCCGCCATA 57.468 55.556 0.00 0.00 45.23 2.74
4586 5488 0.319211 TGTTCCGGTCGCTACAACAG 60.319 55.000 0.00 0.00 0.00 3.16
4587 5489 0.598158 GTGTTCCGGTCGCTACAACA 60.598 55.000 0.00 0.00 0.00 3.33
4588 5490 0.319297 AGTGTTCCGGTCGCTACAAC 60.319 55.000 0.00 0.00 0.00 3.32
4589 5491 0.390124 AAGTGTTCCGGTCGCTACAA 59.610 50.000 13.66 0.00 0.00 2.41
4590 5492 0.390124 AAAGTGTTCCGGTCGCTACA 59.610 50.000 13.66 4.52 0.00 2.74
4591 5493 1.066136 GAAAGTGTTCCGGTCGCTAC 58.934 55.000 13.66 8.96 0.00 3.58
4592 5494 0.037975 GGAAAGTGTTCCGGTCGCTA 60.038 55.000 13.66 0.00 44.01 4.26
4593 5495 1.301479 GGAAAGTGTTCCGGTCGCT 60.301 57.895 0.00 5.46 44.01 4.93
4594 5496 3.250986 GGAAAGTGTTCCGGTCGC 58.749 61.111 0.00 2.91 44.01 5.19
4601 5503 1.021968 ACCGCAAGTGGAAAGTGTTC 58.978 50.000 6.67 0.00 0.00 3.18
4602 5504 0.738389 CACCGCAAGTGGAAAGTGTT 59.262 50.000 6.67 0.00 43.26 3.32
4603 5505 2.404083 CACCGCAAGTGGAAAGTGT 58.596 52.632 6.67 0.00 43.26 3.55
4616 5518 2.167861 GTCTCGAAGATGCCACCGC 61.168 63.158 0.00 0.00 33.89 5.68
4617 5519 0.803768 CTGTCTCGAAGATGCCACCG 60.804 60.000 0.00 0.00 33.89 4.94
4618 5520 0.532573 TCTGTCTCGAAGATGCCACC 59.467 55.000 0.00 0.00 33.89 4.61
4619 5521 1.634702 GTCTGTCTCGAAGATGCCAC 58.365 55.000 0.00 0.00 33.89 5.01
4620 5522 0.171231 CGTCTGTCTCGAAGATGCCA 59.829 55.000 0.00 0.00 33.89 4.92
4621 5523 0.452184 TCGTCTGTCTCGAAGATGCC 59.548 55.000 0.71 0.00 33.89 4.40
4622 5524 1.131504 AGTCGTCTGTCTCGAAGATGC 59.868 52.381 0.71 0.00 39.01 3.91
4623 5525 2.477021 CCAGTCGTCTGTCTCGAAGATG 60.477 54.545 8.82 0.00 39.82 2.90
4624 5526 1.740585 CCAGTCGTCTGTCTCGAAGAT 59.259 52.381 8.82 0.00 39.82 2.40
4625 5527 1.157585 CCAGTCGTCTGTCTCGAAGA 58.842 55.000 8.82 0.00 39.82 2.87
4626 5528 1.129624 CTCCAGTCGTCTGTCTCGAAG 59.870 57.143 8.82 0.00 39.82 3.79
4627 5529 1.157585 CTCCAGTCGTCTGTCTCGAA 58.842 55.000 8.82 0.00 39.82 3.71
4628 5530 0.035036 ACTCCAGTCGTCTGTCTCGA 59.965 55.000 8.82 0.00 39.82 4.04
4629 5531 0.167033 CACTCCAGTCGTCTGTCTCG 59.833 60.000 8.82 0.00 39.82 4.04
4630 5532 0.523966 CCACTCCAGTCGTCTGTCTC 59.476 60.000 8.82 0.00 39.82 3.36
4631 5533 0.896019 CCCACTCCAGTCGTCTGTCT 60.896 60.000 8.82 0.00 39.82 3.41
4632 5534 0.894184 TCCCACTCCAGTCGTCTGTC 60.894 60.000 8.82 0.00 39.82 3.51
4633 5535 0.251832 ATCCCACTCCAGTCGTCTGT 60.252 55.000 8.82 0.00 39.82 3.41
4634 5536 0.174389 CATCCCACTCCAGTCGTCTG 59.826 60.000 2.40 2.40 41.01 3.51
4635 5537 0.972983 CCATCCCACTCCAGTCGTCT 60.973 60.000 0.00 0.00 0.00 4.18
4636 5538 0.970937 TCCATCCCACTCCAGTCGTC 60.971 60.000 0.00 0.00 0.00 4.20
4637 5539 0.325671 ATCCATCCCACTCCAGTCGT 60.326 55.000 0.00 0.00 0.00 4.34
4638 5540 0.833287 AATCCATCCCACTCCAGTCG 59.167 55.000 0.00 0.00 0.00 4.18
4639 5541 1.748591 GCAATCCATCCCACTCCAGTC 60.749 57.143 0.00 0.00 0.00 3.51
4640 5542 0.257039 GCAATCCATCCCACTCCAGT 59.743 55.000 0.00 0.00 0.00 4.00
4641 5543 0.549950 AGCAATCCATCCCACTCCAG 59.450 55.000 0.00 0.00 0.00 3.86
4642 5544 1.490490 GTAGCAATCCATCCCACTCCA 59.510 52.381 0.00 0.00 0.00 3.86
4643 5545 1.202818 GGTAGCAATCCATCCCACTCC 60.203 57.143 0.00 0.00 0.00 3.85
4644 5546 1.771255 AGGTAGCAATCCATCCCACTC 59.229 52.381 0.00 0.00 0.00 3.51
4645 5547 1.492176 CAGGTAGCAATCCATCCCACT 59.508 52.381 0.00 0.00 0.00 4.00
4646 5548 1.972872 CAGGTAGCAATCCATCCCAC 58.027 55.000 0.00 0.00 0.00 4.61
4647 5549 0.183492 GCAGGTAGCAATCCATCCCA 59.817 55.000 0.00 0.00 44.79 4.37
4648 5550 0.886490 CGCAGGTAGCAATCCATCCC 60.886 60.000 0.00 0.00 46.13 3.85
4649 5551 1.510480 GCGCAGGTAGCAATCCATCC 61.510 60.000 0.30 0.00 46.13 3.51
4650 5552 1.835483 CGCGCAGGTAGCAATCCATC 61.835 60.000 8.75 0.00 46.13 3.51
4651 5553 1.889105 CGCGCAGGTAGCAATCCAT 60.889 57.895 8.75 0.00 46.13 3.41
4652 5554 2.310327 ATCGCGCAGGTAGCAATCCA 62.310 55.000 8.75 0.00 46.13 3.41
4653 5555 1.560860 GATCGCGCAGGTAGCAATCC 61.561 60.000 8.75 0.00 46.13 3.01
4654 5556 0.875908 TGATCGCGCAGGTAGCAATC 60.876 55.000 8.75 0.00 46.13 2.67
4655 5557 0.461870 TTGATCGCGCAGGTAGCAAT 60.462 50.000 8.75 0.00 46.13 3.56
4656 5558 0.672091 TTTGATCGCGCAGGTAGCAA 60.672 50.000 8.75 1.58 46.13 3.91
4657 5559 1.079474 TTTGATCGCGCAGGTAGCA 60.079 52.632 8.75 0.00 46.13 3.49
4658 5560 1.084370 ACTTTGATCGCGCAGGTAGC 61.084 55.000 8.75 0.00 40.87 3.58
4659 5561 0.647410 CACTTTGATCGCGCAGGTAG 59.353 55.000 8.75 0.00 0.00 3.18
4660 5562 0.739462 CCACTTTGATCGCGCAGGTA 60.739 55.000 8.75 0.00 0.00 3.08
4661 5563 2.034879 CCACTTTGATCGCGCAGGT 61.035 57.895 8.75 0.00 0.00 4.00
4662 5564 2.753966 CCCACTTTGATCGCGCAGG 61.754 63.158 8.75 0.00 0.00 4.85
4663 5565 2.787249 CCCACTTTGATCGCGCAG 59.213 61.111 8.75 0.00 0.00 5.18
4664 5566 3.430862 GCCCACTTTGATCGCGCA 61.431 61.111 8.75 0.00 0.00 6.09
4665 5567 2.470801 TTTGCCCACTTTGATCGCGC 62.471 55.000 0.00 0.00 0.00 6.86
4666 5568 0.454957 CTTTGCCCACTTTGATCGCG 60.455 55.000 0.00 0.00 0.00 5.87
4667 5569 0.733909 GCTTTGCCCACTTTGATCGC 60.734 55.000 0.00 0.00 0.00 4.58
4668 5570 0.597568 TGCTTTGCCCACTTTGATCG 59.402 50.000 0.00 0.00 0.00 3.69
4669 5571 2.611224 CCTTGCTTTGCCCACTTTGATC 60.611 50.000 0.00 0.00 0.00 2.92
4670 5572 1.345415 CCTTGCTTTGCCCACTTTGAT 59.655 47.619 0.00 0.00 0.00 2.57
4671 5573 0.752054 CCTTGCTTTGCCCACTTTGA 59.248 50.000 0.00 0.00 0.00 2.69
4672 5574 0.752054 TCCTTGCTTTGCCCACTTTG 59.248 50.000 0.00 0.00 0.00 2.77
4673 5575 1.720781 ATCCTTGCTTTGCCCACTTT 58.279 45.000 0.00 0.00 0.00 2.66
4674 5576 1.720781 AATCCTTGCTTTGCCCACTT 58.279 45.000 0.00 0.00 0.00 3.16
4675 5577 2.171003 GTAATCCTTGCTTTGCCCACT 58.829 47.619 0.00 0.00 0.00 4.00
4676 5578 1.135402 CGTAATCCTTGCTTTGCCCAC 60.135 52.381 0.00 0.00 0.00 4.61
4677 5579 1.173043 CGTAATCCTTGCTTTGCCCA 58.827 50.000 0.00 0.00 0.00 5.36
4678 5580 0.455815 CCGTAATCCTTGCTTTGCCC 59.544 55.000 0.00 0.00 0.00 5.36
4679 5581 1.132453 GTCCGTAATCCTTGCTTTGCC 59.868 52.381 0.00 0.00 0.00 4.52
4680 5582 1.132453 GGTCCGTAATCCTTGCTTTGC 59.868 52.381 0.00 0.00 0.00 3.68
4681 5583 2.420022 CTGGTCCGTAATCCTTGCTTTG 59.580 50.000 0.00 0.00 0.00 2.77
4682 5584 2.711542 CTGGTCCGTAATCCTTGCTTT 58.288 47.619 0.00 0.00 0.00 3.51
4683 5585 1.679032 GCTGGTCCGTAATCCTTGCTT 60.679 52.381 0.00 0.00 0.00 3.91
4684 5586 0.107654 GCTGGTCCGTAATCCTTGCT 60.108 55.000 0.00 0.00 0.00 3.91
4685 5587 1.095807 GGCTGGTCCGTAATCCTTGC 61.096 60.000 0.00 0.00 0.00 4.01
4686 5588 3.080647 GGCTGGTCCGTAATCCTTG 57.919 57.895 0.00 0.00 0.00 3.61
4696 5598 3.305314 TGGTACATCGGCTGGTCC 58.695 61.111 0.00 0.00 0.00 4.46
4710 5612 9.081204 TGCATAATTATTATTCAGAGCAATGGT 57.919 29.630 0.00 0.00 0.00 3.55
4714 5616 8.525316 CCCATGCATAATTATTATTCAGAGCAA 58.475 33.333 0.00 0.00 0.00 3.91
4715 5617 7.123098 CCCCATGCATAATTATTATTCAGAGCA 59.877 37.037 0.00 8.60 0.00 4.26
4716 5618 7.486647 CCCCATGCATAATTATTATTCAGAGC 58.513 38.462 0.00 1.59 0.00 4.09
4717 5619 7.486647 GCCCCATGCATAATTATTATTCAGAG 58.513 38.462 0.00 0.17 40.77 3.35
4718 5620 7.408756 GCCCCATGCATAATTATTATTCAGA 57.591 36.000 0.00 0.00 40.77 3.27
4734 5636 0.105964 TGTCTATACGTGCCCCATGC 59.894 55.000 0.00 0.00 41.77 4.06
4735 5637 2.613026 TTGTCTATACGTGCCCCATG 57.387 50.000 0.00 0.00 0.00 3.66
4736 5638 2.158813 CCTTTGTCTATACGTGCCCCAT 60.159 50.000 0.00 0.00 0.00 4.00
4737 5639 1.208535 CCTTTGTCTATACGTGCCCCA 59.791 52.381 0.00 0.00 0.00 4.96
4738 5640 1.949465 CCTTTGTCTATACGTGCCCC 58.051 55.000 0.00 0.00 0.00 5.80
4739 5641 1.296727 GCCTTTGTCTATACGTGCCC 58.703 55.000 0.00 0.00 0.00 5.36
4740 5642 0.928229 CGCCTTTGTCTATACGTGCC 59.072 55.000 0.00 0.00 0.00 5.01
4741 5643 1.917273 TCGCCTTTGTCTATACGTGC 58.083 50.000 0.00 0.00 0.00 5.34
4742 5644 4.856664 AGTATCGCCTTTGTCTATACGTG 58.143 43.478 0.00 0.00 0.00 4.49
4743 5645 5.511234 AAGTATCGCCTTTGTCTATACGT 57.489 39.130 0.00 0.00 0.00 3.57
4744 5646 5.562998 CGTAAGTATCGCCTTTGTCTATACG 59.437 44.000 0.00 0.00 0.00 3.06
4745 5647 6.908216 CGTAAGTATCGCCTTTGTCTATAC 57.092 41.667 0.00 0.00 0.00 1.47
4764 5666 7.654568 ACTATATATGCAAGCAGTGTACGTAA 58.345 34.615 0.00 0.00 0.00 3.18
4765 5667 7.210718 ACTATATATGCAAGCAGTGTACGTA 57.789 36.000 0.00 0.00 0.00 3.57
4766 5668 6.085555 ACTATATATGCAAGCAGTGTACGT 57.914 37.500 0.00 0.00 0.00 3.57
4767 5669 6.251589 GCTACTATATATGCAAGCAGTGTACG 59.748 42.308 0.00 0.00 0.00 3.67
4768 5670 7.316640 AGCTACTATATATGCAAGCAGTGTAC 58.683 38.462 13.96 0.00 32.42 2.90
4769 5671 7.468141 AGCTACTATATATGCAAGCAGTGTA 57.532 36.000 13.96 0.00 32.42 2.90
4770 5672 6.352016 AGCTACTATATATGCAAGCAGTGT 57.648 37.500 13.96 0.00 32.42 3.55
4771 5673 8.412456 AGATAGCTACTATATATGCAAGCAGTG 58.588 37.037 13.96 0.00 32.42 3.66
4772 5674 8.412456 CAGATAGCTACTATATATGCAAGCAGT 58.588 37.037 13.96 4.09 32.42 4.40
4773 5675 7.381948 GCAGATAGCTACTATATATGCAAGCAG 59.618 40.741 7.90 0.00 41.15 4.24
4774 5676 7.205992 GCAGATAGCTACTATATATGCAAGCA 58.794 38.462 7.90 0.00 41.15 3.91
4775 5677 6.644592 GGCAGATAGCTACTATATATGCAAGC 59.355 42.308 13.42 0.00 44.79 4.01
4776 5678 7.866898 CAGGCAGATAGCTACTATATATGCAAG 59.133 40.741 13.42 3.44 44.79 4.01
4777 5679 7.561356 TCAGGCAGATAGCTACTATATATGCAA 59.439 37.037 13.42 0.00 44.79 4.08
4778 5680 7.062957 TCAGGCAGATAGCTACTATATATGCA 58.937 38.462 13.42 0.00 44.79 3.96
4779 5681 7.517614 TCAGGCAGATAGCTACTATATATGC 57.482 40.000 4.76 4.76 44.79 3.14
4783 5685 9.349713 GTCTAATCAGGCAGATAGCTACTATAT 57.650 37.037 0.00 0.00 44.79 0.86
4784 5686 7.496263 CGTCTAATCAGGCAGATAGCTACTATA 59.504 40.741 0.00 0.00 44.79 1.31
4785 5687 6.317642 CGTCTAATCAGGCAGATAGCTACTAT 59.682 42.308 0.00 0.00 44.79 2.12
4786 5688 5.644206 CGTCTAATCAGGCAGATAGCTACTA 59.356 44.000 0.00 0.00 44.79 1.82
4787 5689 4.457603 CGTCTAATCAGGCAGATAGCTACT 59.542 45.833 0.00 0.00 44.79 2.57
4788 5690 4.216687 ACGTCTAATCAGGCAGATAGCTAC 59.783 45.833 0.00 0.00 44.79 3.58
4789 5691 4.399219 ACGTCTAATCAGGCAGATAGCTA 58.601 43.478 0.00 0.00 44.79 3.32
4790 5692 3.226777 ACGTCTAATCAGGCAGATAGCT 58.773 45.455 0.00 0.00 44.79 3.32
4791 5693 3.651803 ACGTCTAATCAGGCAGATAGC 57.348 47.619 0.00 0.00 44.65 2.97
4792 5694 3.738282 GCAACGTCTAATCAGGCAGATAG 59.262 47.826 0.00 0.00 35.39 2.08
4793 5695 3.132111 TGCAACGTCTAATCAGGCAGATA 59.868 43.478 0.00 0.00 35.39 1.98
4794 5696 2.093500 TGCAACGTCTAATCAGGCAGAT 60.093 45.455 0.00 0.00 39.09 2.90
4795 5697 1.275010 TGCAACGTCTAATCAGGCAGA 59.725 47.619 0.00 0.00 0.00 4.26
4796 5698 1.394917 GTGCAACGTCTAATCAGGCAG 59.605 52.381 0.00 0.00 0.00 4.85
4797 5699 1.438651 GTGCAACGTCTAATCAGGCA 58.561 50.000 0.00 0.00 0.00 4.75
4798 5700 0.727398 GGTGCAACGTCTAATCAGGC 59.273 55.000 0.00 0.00 38.12 4.85
4799 5701 2.093306 TGGTGCAACGTCTAATCAGG 57.907 50.000 0.00 0.00 38.12 3.86
4800 5702 2.223112 GCATGGTGCAACGTCTAATCAG 60.223 50.000 0.00 0.00 44.26 2.90
4801 5703 1.737236 GCATGGTGCAACGTCTAATCA 59.263 47.619 0.00 0.00 44.26 2.57
4802 5704 2.458592 GCATGGTGCAACGTCTAATC 57.541 50.000 0.00 0.00 44.26 1.75
4813 5715 2.101575 CTGTGCGATGCATGGTGC 59.898 61.111 2.46 6.03 41.91 5.01
4814 5716 2.101575 GCTGTGCGATGCATGGTG 59.898 61.111 2.46 0.00 41.91 4.17
4815 5717 2.360225 TGCTGTGCGATGCATGGT 60.360 55.556 2.46 0.00 41.91 3.55
4816 5718 2.101575 GTGCTGTGCGATGCATGG 59.898 61.111 2.46 3.37 41.91 3.66
4817 5719 2.101575 GGTGCTGTGCGATGCATG 59.898 61.111 2.46 0.00 41.91 4.06
4818 5720 2.360225 TGGTGCTGTGCGATGCAT 60.360 55.556 0.00 0.00 41.91 3.96
4819 5721 3.051479 CTGGTGCTGTGCGATGCA 61.051 61.111 0.00 0.00 36.79 3.96
4820 5722 4.471726 GCTGGTGCTGTGCGATGC 62.472 66.667 0.00 0.00 36.03 3.91
4831 5733 4.435436 TGCGACCGCTAGCTGGTG 62.435 66.667 28.09 21.28 40.63 4.17
4832 5734 4.135153 CTGCGACCGCTAGCTGGT 62.135 66.667 24.82 24.82 44.10 4.00
4833 5735 4.135153 ACTGCGACCGCTAGCTGG 62.135 66.667 19.72 19.72 42.51 4.85
4834 5736 2.580867 GACTGCGACCGCTAGCTG 60.581 66.667 13.93 9.13 42.51 4.24
4835 5737 4.180946 CGACTGCGACCGCTAGCT 62.181 66.667 13.93 0.00 42.51 3.32
4854 5756 3.628008 TCCTCGGAGTACACACATATGT 58.372 45.455 1.41 1.41 40.80 2.29
4855 5757 4.649088 TTCCTCGGAGTACACACATATG 57.351 45.455 0.00 0.00 0.00 1.78
4856 5758 5.141182 AGATTCCTCGGAGTACACACATAT 58.859 41.667 4.02 0.00 0.00 1.78
4857 5759 4.533815 AGATTCCTCGGAGTACACACATA 58.466 43.478 4.02 0.00 0.00 2.29
4858 5760 3.366396 AGATTCCTCGGAGTACACACAT 58.634 45.455 4.02 0.00 0.00 3.21
4859 5761 2.753452 GAGATTCCTCGGAGTACACACA 59.247 50.000 4.02 0.00 0.00 3.72
4860 5762 3.423996 GAGATTCCTCGGAGTACACAC 57.576 52.381 4.02 0.00 0.00 3.82
4871 5773 3.621394 GCGCGCACGAGATTCCTC 61.621 66.667 29.10 0.00 43.93 3.71
4872 5774 4.435436 TGCGCGCACGAGATTCCT 62.435 61.111 33.09 0.00 43.93 3.36
4873 5775 4.210304 GTGCGCGCACGAGATTCC 62.210 66.667 43.80 22.52 43.93 3.01
4881 5783 4.696172 GTGTGTACGTGCGCGCAC 62.696 66.667 45.38 45.38 42.83 5.34
4891 5793 1.463444 GGAACATGCCTTCGTGTGTAC 59.537 52.381 0.00 0.00 41.33 2.90
4892 5794 1.346395 AGGAACATGCCTTCGTGTGTA 59.654 47.619 0.00 0.00 41.33 2.90
4893 5795 0.108585 AGGAACATGCCTTCGTGTGT 59.891 50.000 0.00 0.00 41.33 3.72
4894 5796 0.798776 GAGGAACATGCCTTCGTGTG 59.201 55.000 0.00 0.00 41.33 3.82
4895 5797 0.321653 GGAGGAACATGCCTTCGTGT 60.322 55.000 0.00 0.00 43.88 4.49
4896 5798 0.036010 AGGAGGAACATGCCTTCGTG 60.036 55.000 0.00 0.00 38.67 4.35
4897 5799 0.250513 GAGGAGGAACATGCCTTCGT 59.749 55.000 0.00 0.00 38.67 3.85
4898 5800 0.462759 GGAGGAGGAACATGCCTTCG 60.463 60.000 0.00 0.00 38.67 3.79
4899 5801 0.915364 AGGAGGAGGAACATGCCTTC 59.085 55.000 0.00 0.00 38.73 3.46
4900 5802 1.840635 GTAGGAGGAGGAACATGCCTT 59.159 52.381 0.00 0.00 38.73 4.35
4901 5803 1.501582 GTAGGAGGAGGAACATGCCT 58.498 55.000 0.00 0.00 42.17 4.75
4902 5804 0.105039 CGTAGGAGGAGGAACATGCC 59.895 60.000 0.00 0.00 0.00 4.40
4903 5805 0.824759 ACGTAGGAGGAGGAACATGC 59.175 55.000 0.00 0.00 0.00 4.06
4904 5806 3.611766 AAACGTAGGAGGAGGAACATG 57.388 47.619 0.00 0.00 0.00 3.21
4905 5807 3.132467 GCTAAACGTAGGAGGAGGAACAT 59.868 47.826 0.00 0.00 0.00 2.71
4906 5808 2.494870 GCTAAACGTAGGAGGAGGAACA 59.505 50.000 0.00 0.00 0.00 3.18
4907 5809 2.494870 TGCTAAACGTAGGAGGAGGAAC 59.505 50.000 0.00 0.00 0.00 3.62
4908 5810 2.494870 GTGCTAAACGTAGGAGGAGGAA 59.505 50.000 0.00 0.00 0.00 3.36
4909 5811 2.097825 GTGCTAAACGTAGGAGGAGGA 58.902 52.381 0.00 0.00 0.00 3.71
4910 5812 2.580966 GTGCTAAACGTAGGAGGAGG 57.419 55.000 0.00 0.00 0.00 4.30
4921 5823 1.302192 TGGTCCTGCCGTGCTAAAC 60.302 57.895 0.00 0.00 41.21 2.01
4922 5824 1.302192 GTGGTCCTGCCGTGCTAAA 60.302 57.895 0.00 0.00 41.21 1.85
4923 5825 2.345991 GTGGTCCTGCCGTGCTAA 59.654 61.111 0.00 0.00 41.21 3.09
4924 5826 3.702048 GGTGGTCCTGCCGTGCTA 61.702 66.667 0.00 0.00 41.21 3.49
4927 5829 3.883744 GAGTGGTGGTCCTGCCGTG 62.884 68.421 0.00 0.00 41.21 4.94
4928 5830 3.626924 GAGTGGTGGTCCTGCCGT 61.627 66.667 0.00 0.00 41.21 5.68
4929 5831 4.394712 GGAGTGGTGGTCCTGCCG 62.395 72.222 0.00 0.00 41.21 5.69
4930 5832 4.394712 CGGAGTGGTGGTCCTGCC 62.395 72.222 0.00 0.00 37.90 4.85
4932 5834 4.394712 GGCGGAGTGGTGGTCCTG 62.395 72.222 0.00 0.00 34.23 3.86
4933 5835 4.954118 TGGCGGAGTGGTGGTCCT 62.954 66.667 0.00 0.00 34.23 3.85
4934 5836 4.394712 CTGGCGGAGTGGTGGTCC 62.395 72.222 0.00 0.00 0.00 4.46
4937 5839 4.641645 TTGCTGGCGGAGTGGTGG 62.642 66.667 0.00 0.00 0.00 4.61
4938 5840 3.357079 GTTGCTGGCGGAGTGGTG 61.357 66.667 0.00 0.00 0.00 4.17
4939 5841 4.988598 CGTTGCTGGCGGAGTGGT 62.989 66.667 0.00 0.00 0.00 4.16
4942 5844 4.704833 ATGCGTTGCTGGCGGAGT 62.705 61.111 0.00 0.00 32.45 3.85
4943 5845 4.170062 CATGCGTTGCTGGCGGAG 62.170 66.667 0.00 0.00 32.45 4.63
4945 5847 3.951655 GAACATGCGTTGCTGGCGG 62.952 63.158 0.00 0.00 34.75 6.13
4946 5848 2.502510 GAACATGCGTTGCTGGCG 60.503 61.111 0.00 0.00 34.75 5.69
4947 5849 1.730547 GTGAACATGCGTTGCTGGC 60.731 57.895 0.00 0.00 34.75 4.85
4948 5850 0.311790 AAGTGAACATGCGTTGCTGG 59.688 50.000 0.00 0.00 34.75 4.85
4949 5851 1.401530 CAAGTGAACATGCGTTGCTG 58.598 50.000 0.00 0.00 34.75 4.41
4950 5852 0.311790 CCAAGTGAACATGCGTTGCT 59.688 50.000 0.00 0.00 34.75 3.91
4951 5853 0.030638 ACCAAGTGAACATGCGTTGC 59.969 50.000 0.00 0.00 34.75 4.17
4952 5854 1.333308 TGACCAAGTGAACATGCGTTG 59.667 47.619 0.00 0.00 34.75 4.10
4953 5855 1.603802 CTGACCAAGTGAACATGCGTT 59.396 47.619 0.00 0.00 38.33 4.84
4954 5856 1.229428 CTGACCAAGTGAACATGCGT 58.771 50.000 0.00 0.00 0.00 5.24
4955 5857 0.518636 CCTGACCAAGTGAACATGCG 59.481 55.000 0.00 0.00 0.00 4.73
4956 5858 0.242017 GCCTGACCAAGTGAACATGC 59.758 55.000 0.00 0.00 0.00 4.06
4957 5859 1.538512 CTGCCTGACCAAGTGAACATG 59.461 52.381 0.00 0.00 0.00 3.21
4958 5860 1.546323 CCTGCCTGACCAAGTGAACAT 60.546 52.381 0.00 0.00 0.00 2.71
4959 5861 0.179020 CCTGCCTGACCAAGTGAACA 60.179 55.000 0.00 0.00 0.00 3.18
4960 5862 1.518903 GCCTGCCTGACCAAGTGAAC 61.519 60.000 0.00 0.00 0.00 3.18
4961 5863 1.228245 GCCTGCCTGACCAAGTGAA 60.228 57.895 0.00 0.00 0.00 3.18
4962 5864 2.431683 GCCTGCCTGACCAAGTGA 59.568 61.111 0.00 0.00 0.00 3.41
4963 5865 2.674380 GGCCTGCCTGACCAAGTG 60.674 66.667 0.00 0.00 0.00 3.16
4964 5866 2.541907 ATGGCCTGCCTGACCAAGT 61.542 57.895 9.97 0.00 36.94 3.16
4965 5867 2.050350 CATGGCCTGCCTGACCAAG 61.050 63.158 9.97 0.00 36.94 3.61
4966 5868 2.036098 CATGGCCTGCCTGACCAA 59.964 61.111 9.97 0.00 36.94 3.67
4967 5869 4.746309 GCATGGCCTGCCTGACCA 62.746 66.667 14.21 0.00 45.66 4.02
4975 5877 0.249447 CAGATTGCATGCATGGCCTG 60.249 55.000 27.34 20.02 0.00 4.85
4976 5878 1.399744 CCAGATTGCATGCATGGCCT 61.400 55.000 27.34 12.93 0.00 5.19
4977 5879 1.069090 CCAGATTGCATGCATGGCC 59.931 57.895 27.34 12.69 0.00 5.36
4978 5880 4.750460 CCAGATTGCATGCATGGC 57.250 55.556 27.34 19.18 0.00 4.40
4979 5881 1.299850 CGCCAGATTGCATGCATGG 60.300 57.895 27.39 27.39 0.00 3.66
4980 5882 0.317854 CTCGCCAGATTGCATGCATG 60.318 55.000 23.37 22.70 0.00 4.06
4981 5883 2.030551 CTCGCCAGATTGCATGCAT 58.969 52.632 23.37 11.80 0.00 3.96
4982 5884 2.767445 GCTCGCCAGATTGCATGCA 61.767 57.895 18.46 18.46 0.00 3.96
4983 5885 2.025727 GCTCGCCAGATTGCATGC 59.974 61.111 11.82 11.82 0.00 4.06
4984 5886 1.153597 TACGCTCGCCAGATTGCATG 61.154 55.000 0.00 0.00 0.00 4.06
4985 5887 1.143838 TACGCTCGCCAGATTGCAT 59.856 52.632 0.00 0.00 0.00 3.96
4986 5888 1.809619 GTACGCTCGCCAGATTGCA 60.810 57.895 0.00 0.00 0.00 4.08
4987 5889 2.860628 CGTACGCTCGCCAGATTGC 61.861 63.158 0.52 0.00 0.00 3.56
4988 5890 0.800683 TTCGTACGCTCGCCAGATTG 60.801 55.000 11.24 0.00 0.00 2.67
4989 5891 0.801067 GTTCGTACGCTCGCCAGATT 60.801 55.000 11.24 0.00 0.00 2.40
4990 5892 1.226603 GTTCGTACGCTCGCCAGAT 60.227 57.895 11.24 0.00 0.00 2.90
4991 5893 2.177531 GTTCGTACGCTCGCCAGA 59.822 61.111 11.24 0.00 0.00 3.86
4992 5894 2.879462 GGTTCGTACGCTCGCCAG 60.879 66.667 11.24 0.00 0.00 4.85
4993 5895 4.424566 GGGTTCGTACGCTCGCCA 62.425 66.667 11.24 0.00 34.59 5.69
4995 5897 3.711541 ATGGGGTTCGTACGCTCGC 62.712 63.158 11.24 13.29 37.38 5.03
4996 5898 1.588139 GATGGGGTTCGTACGCTCG 60.588 63.158 11.24 0.00 37.38 5.03
4997 5899 1.588139 CGATGGGGTTCGTACGCTC 60.588 63.158 11.24 5.69 37.38 5.03
4998 5900 2.048023 TCGATGGGGTTCGTACGCT 61.048 57.895 11.24 0.00 40.03 5.07
4999 5901 1.875364 GTCGATGGGGTTCGTACGC 60.875 63.158 11.24 0.33 40.03 4.42
5000 5902 1.584483 CGTCGATGGGGTTCGTACG 60.584 63.158 9.53 9.53 40.03 3.67
5001 5903 0.383231 ATCGTCGATGGGGTTCGTAC 59.617 55.000 7.00 0.00 40.03 3.67
5002 5904 2.797837 ATCGTCGATGGGGTTCGTA 58.202 52.632 7.00 0.00 40.03 3.43
5003 5905 3.612251 ATCGTCGATGGGGTTCGT 58.388 55.556 7.00 0.00 40.03 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.