Multiple sequence alignment - TraesCS7D01G453300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G453300 chr7D 100.000 2465 0 0 1 2465 572825518 572823054 0.000000e+00 4553.0
1 TraesCS7D01G453300 chr7D 86.339 549 39 12 819 1334 572835731 572835186 1.280000e-157 566.0
2 TraesCS7D01G453300 chr7D 80.519 154 10 9 540 678 572835912 572835764 1.560000e-17 100.0
3 TraesCS7D01G453300 chr7D 94.872 39 2 0 1 39 595316924 595316886 7.360000e-06 62.1
4 TraesCS7D01G453300 chr7B 88.932 1021 44 16 773 1764 630607343 630606363 0.000000e+00 1195.0
5 TraesCS7D01G453300 chr7B 91.929 508 30 7 35 539 630650452 630649953 0.000000e+00 701.0
6 TraesCS7D01G453300 chr7B 83.393 560 35 23 822 1334 630652067 630651519 1.330000e-127 466.0
7 TraesCS7D01G453300 chr7B 80.000 420 69 10 60 472 501942601 501943012 1.850000e-76 296.0
8 TraesCS7D01G453300 chr7B 93.401 197 6 6 540 734 630607529 630607338 4.010000e-73 285.0
9 TraesCS7D01G453300 chr7B 87.943 141 14 3 1930 2067 630606273 630606133 1.960000e-36 163.0
10 TraesCS7D01G453300 chr7B 95.238 42 0 2 1448 1487 630651389 630651348 5.690000e-07 65.8
11 TraesCS7D01G453300 chr7A 91.922 718 30 15 35 734 662144534 662143827 0.000000e+00 979.0
12 TraesCS7D01G453300 chr7A 83.824 544 37 23 833 1333 662170002 662169467 1.030000e-128 470.0
13 TraesCS7D01G453300 chr7A 81.938 609 53 22 773 1333 662143832 662143233 1.730000e-126 462.0
14 TraesCS7D01G453300 chr5D 85.714 462 55 8 35 488 232131835 232131377 6.170000e-131 477.0
15 TraesCS7D01G453300 chr5D 97.297 37 1 0 1 37 512352601 512352637 2.050000e-06 63.9
16 TraesCS7D01G453300 chr5D 97.222 36 1 0 1 36 526509641 526509676 7.360000e-06 62.1
17 TraesCS7D01G453300 chr5A 87.398 246 26 4 245 488 324080898 324081140 6.710000e-71 278.0
18 TraesCS7D01G453300 chr5A 85.000 220 28 3 35 249 324079103 324079322 4.130000e-53 219.0
19 TraesCS7D01G453300 chr2B 78.713 404 72 9 35 428 561856219 561856618 8.750000e-65 257.0
20 TraesCS7D01G453300 chr2B 84.259 216 24 4 108 315 715307682 715307469 4.160000e-48 202.0
21 TraesCS7D01G453300 chr2B 97.297 37 1 0 736 772 13010325 13010289 2.050000e-06 63.9
22 TraesCS7D01G453300 chr2B 92.105 38 3 0 735 772 512372893 512372930 1.000000e-03 54.7
23 TraesCS7D01G453300 chr6B 89.474 114 12 0 2256 2369 20945631 20945518 7.100000e-31 145.0
24 TraesCS7D01G453300 chrUn 90.000 110 11 0 2260 2369 113191552 113191443 2.560000e-30 143.0
25 TraesCS7D01G453300 chrUn 91.837 98 8 0 2272 2369 407338587 407338490 1.190000e-28 137.0
26 TraesCS7D01G453300 chr1B 89.381 113 12 0 2257 2369 571832453 571832565 2.560000e-30 143.0
27 TraesCS7D01G453300 chr3B 88.696 115 12 1 2257 2370 177445050 177445164 3.310000e-29 139.0
28 TraesCS7D01G453300 chr3B 88.496 113 13 0 2257 2369 107776530 107776642 1.190000e-28 137.0
29 TraesCS7D01G453300 chr3B 93.182 44 1 2 1 43 218573474 218573516 2.050000e-06 63.9
30 TraesCS7D01G453300 chr3B 93.182 44 1 2 1 43 219961764 219961806 2.050000e-06 63.9
31 TraesCS7D01G453300 chr3B 97.297 37 1 0 1 37 780567381 780567345 2.050000e-06 63.9
32 TraesCS7D01G453300 chr5B 88.496 113 13 0 2257 2369 508730709 508730821 1.190000e-28 137.0
33 TraesCS7D01G453300 chr5B 100.000 39 0 0 734 772 478402005 478402043 3.400000e-09 73.1
34 TraesCS7D01G453300 chr4A 88.496 113 13 0 2257 2369 626949982 626950094 1.190000e-28 137.0
35 TraesCS7D01G453300 chr4A 100.000 36 0 0 736 771 614551824 614551789 1.580000e-07 67.6
36 TraesCS7D01G453300 chr3A 88.496 113 13 0 2257 2369 628867093 628867205 1.190000e-28 137.0
37 TraesCS7D01G453300 chr2D 84.694 98 13 2 377 473 645948790 645948886 2.020000e-16 97.1
38 TraesCS7D01G453300 chr2D 100.000 35 0 0 1 35 468867887 468867853 5.690000e-07 65.8
39 TraesCS7D01G453300 chr3D 100.000 39 0 0 734 772 105466856 105466818 3.400000e-09 73.1
40 TraesCS7D01G453300 chr3D 97.436 39 1 0 734 772 594058035 594057997 1.580000e-07 67.6
41 TraesCS7D01G453300 chr2A 100.000 39 0 0 734 772 3859927 3859889 3.400000e-09 73.1
42 TraesCS7D01G453300 chr1D 100.000 35 0 0 1 35 19285751 19285785 5.690000e-07 65.8
43 TraesCS7D01G453300 chr1D 93.182 44 2 1 2 45 414306733 414306691 2.050000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G453300 chr7D 572823054 572825518 2464 True 4553.000000 4553 100.000000 1 2465 1 chr7D.!!$R1 2464
1 TraesCS7D01G453300 chr7D 572835186 572835912 726 True 333.000000 566 83.429000 540 1334 2 chr7D.!!$R3 794
2 TraesCS7D01G453300 chr7B 630606133 630607529 1396 True 547.666667 1195 90.092000 540 2067 3 chr7B.!!$R1 1527
3 TraesCS7D01G453300 chr7B 630649953 630652067 2114 True 410.933333 701 90.186667 35 1487 3 chr7B.!!$R2 1452
4 TraesCS7D01G453300 chr7A 662143233 662144534 1301 True 720.500000 979 86.930000 35 1333 2 chr7A.!!$R2 1298
5 TraesCS7D01G453300 chr7A 662169467 662170002 535 True 470.000000 470 83.824000 833 1333 1 chr7A.!!$R1 500
6 TraesCS7D01G453300 chr5A 324079103 324081140 2037 False 248.500000 278 86.199000 35 488 2 chr5A.!!$F1 453

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
488 2075 0.749818 TAGAGACGGAGCAGGAGCAG 60.75 60.0 0.0 0.0 45.49 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2418 4876 0.035152 TGCTAGGTTGAGCCACCATG 60.035 55.0 0.0 0.0 42.11 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.650778 CAGGCCCAAACGAAAGCC 59.349 61.111 0.00 0.00 46.13 4.35
19 20 2.600470 GGCCCAAACGAAAGCCCT 60.600 61.111 0.00 0.00 39.60 5.19
20 21 2.650778 GCCCAAACGAAAGCCCTG 59.349 61.111 0.00 0.00 0.00 4.45
21 22 2.200337 GCCCAAACGAAAGCCCTGT 61.200 57.895 0.00 0.00 0.00 4.00
22 23 1.744320 GCCCAAACGAAAGCCCTGTT 61.744 55.000 0.00 0.00 0.00 3.16
23 24 0.750249 CCCAAACGAAAGCCCTGTTT 59.250 50.000 0.00 0.00 36.31 2.83
24 25 1.138069 CCCAAACGAAAGCCCTGTTTT 59.862 47.619 0.00 0.00 33.80 2.43
25 26 2.469826 CCAAACGAAAGCCCTGTTTTC 58.530 47.619 0.00 0.00 33.80 2.29
26 27 2.100749 CCAAACGAAAGCCCTGTTTTCT 59.899 45.455 0.00 0.00 33.80 2.52
27 28 3.316868 CCAAACGAAAGCCCTGTTTTCTA 59.683 43.478 0.00 0.00 33.80 2.10
28 29 4.287720 CAAACGAAAGCCCTGTTTTCTAC 58.712 43.478 0.00 0.00 33.80 2.59
29 30 3.487120 ACGAAAGCCCTGTTTTCTACT 57.513 42.857 0.00 0.00 32.09 2.57
30 31 4.612264 ACGAAAGCCCTGTTTTCTACTA 57.388 40.909 0.00 0.00 32.09 1.82
31 32 4.566987 ACGAAAGCCCTGTTTTCTACTAG 58.433 43.478 0.00 0.00 32.09 2.57
32 33 4.040095 ACGAAAGCCCTGTTTTCTACTAGT 59.960 41.667 0.00 0.00 32.09 2.57
33 34 4.389077 CGAAAGCCCTGTTTTCTACTAGTG 59.611 45.833 5.39 0.00 32.09 2.74
108 109 8.429641 ACCTTTAATCGGTCATACTTCATATGT 58.570 33.333 1.90 0.00 41.44 2.29
219 225 4.326826 CGGCATATGGTTACTTGGATGAT 58.673 43.478 4.56 0.00 0.00 2.45
433 2020 1.450312 CCTCCCCAACAGCATCGAC 60.450 63.158 0.00 0.00 0.00 4.20
459 2046 1.392853 GCTTGAGTGAAGATGTCGCAG 59.607 52.381 0.00 0.00 39.39 5.18
473 2060 1.025113 TCGCAGAGGTCGGTGTAGAG 61.025 60.000 0.00 0.00 0.00 2.43
474 2061 1.025113 CGCAGAGGTCGGTGTAGAGA 61.025 60.000 0.00 0.00 0.00 3.10
487 2074 1.032657 GTAGAGACGGAGCAGGAGCA 61.033 60.000 0.00 0.00 45.49 4.26
488 2075 0.749818 TAGAGACGGAGCAGGAGCAG 60.750 60.000 0.00 0.00 45.49 4.24
489 2076 3.073735 AGACGGAGCAGGAGCAGG 61.074 66.667 0.00 0.00 45.49 4.85
490 2077 3.071206 GACGGAGCAGGAGCAGGA 61.071 66.667 0.00 0.00 45.49 3.86
491 2078 3.073735 ACGGAGCAGGAGCAGGAG 61.074 66.667 0.00 0.00 45.49 3.69
492 2079 2.757508 CGGAGCAGGAGCAGGAGA 60.758 66.667 0.00 0.00 45.49 3.71
513 2100 1.946475 GAGGTCGGTGTAGAGGGTGC 61.946 65.000 0.00 0.00 0.00 5.01
534 2121 2.086054 TTCTTGAGAGGAAAGCTCGC 57.914 50.000 0.00 0.00 35.15 5.03
536 2123 1.079819 TTGAGAGGAAAGCTCGCGG 60.080 57.895 6.13 0.00 35.15 6.46
537 2124 2.888051 GAGAGGAAAGCTCGCGGC 60.888 66.667 6.13 9.11 42.19 6.53
694 2309 3.639561 TCTTCCATAATTCCACGATCCGA 59.360 43.478 0.00 0.00 0.00 4.55
695 2310 4.100344 TCTTCCATAATTCCACGATCCGAA 59.900 41.667 0.00 0.00 0.00 4.30
696 2311 3.990092 TCCATAATTCCACGATCCGAAG 58.010 45.455 0.00 0.00 0.00 3.79
697 2312 3.386726 TCCATAATTCCACGATCCGAAGT 59.613 43.478 0.00 0.00 0.00 3.01
736 2358 4.895668 TTTTACATCACCGAAGTAGGGT 57.104 40.909 0.00 0.00 38.65 4.34
737 2359 5.999205 TTTTACATCACCGAAGTAGGGTA 57.001 39.130 0.00 0.00 35.58 3.69
738 2360 5.999205 TTTACATCACCGAAGTAGGGTAA 57.001 39.130 0.00 0.00 35.58 2.85
739 2361 5.999205 TTACATCACCGAAGTAGGGTAAA 57.001 39.130 0.00 0.00 35.58 2.01
740 2362 4.198028 ACATCACCGAAGTAGGGTAAAC 57.802 45.455 0.00 0.00 35.58 2.01
741 2363 3.579586 ACATCACCGAAGTAGGGTAAACA 59.420 43.478 0.00 0.00 35.58 2.83
742 2364 4.224370 ACATCACCGAAGTAGGGTAAACAT 59.776 41.667 0.00 0.00 35.58 2.71
743 2365 4.196626 TCACCGAAGTAGGGTAAACATG 57.803 45.455 0.00 0.00 35.58 3.21
744 2366 3.579586 TCACCGAAGTAGGGTAAACATGT 59.420 43.478 0.00 0.00 35.58 3.21
745 2367 4.040706 TCACCGAAGTAGGGTAAACATGTT 59.959 41.667 4.92 4.92 35.58 2.71
746 2368 4.153475 CACCGAAGTAGGGTAAACATGTTG 59.847 45.833 12.82 0.00 35.58 3.33
747 2369 4.202388 ACCGAAGTAGGGTAAACATGTTGT 60.202 41.667 12.82 5.25 35.58 3.32
748 2370 5.011943 ACCGAAGTAGGGTAAACATGTTGTA 59.988 40.000 12.82 4.27 35.58 2.41
749 2371 5.579511 CCGAAGTAGGGTAAACATGTTGTAG 59.420 44.000 12.82 0.00 0.00 2.74
750 2372 6.392354 CGAAGTAGGGTAAACATGTTGTAGA 58.608 40.000 12.82 0.00 0.00 2.59
751 2373 6.530534 CGAAGTAGGGTAAACATGTTGTAGAG 59.469 42.308 12.82 0.00 0.00 2.43
752 2374 5.731591 AGTAGGGTAAACATGTTGTAGAGC 58.268 41.667 12.82 7.65 0.00 4.09
753 2375 4.634012 AGGGTAAACATGTTGTAGAGCA 57.366 40.909 12.82 0.00 0.00 4.26
754 2376 5.179452 AGGGTAAACATGTTGTAGAGCAT 57.821 39.130 12.82 2.96 0.00 3.79
755 2377 6.308015 AGGGTAAACATGTTGTAGAGCATA 57.692 37.500 12.82 0.00 0.00 3.14
756 2378 6.349300 AGGGTAAACATGTTGTAGAGCATAG 58.651 40.000 12.82 0.00 0.00 2.23
757 2379 5.527582 GGGTAAACATGTTGTAGAGCATAGG 59.472 44.000 12.82 0.00 0.00 2.57
758 2380 5.007724 GGTAAACATGTTGTAGAGCATAGGC 59.992 44.000 12.82 0.00 41.61 3.93
769 2391 2.493547 GCATAGGCTTTGGGACACC 58.506 57.895 7.07 0.00 35.45 4.16
770 2392 1.037579 GCATAGGCTTTGGGACACCC 61.038 60.000 7.07 0.00 39.85 4.61
813 2446 6.379417 TGTCATCATGTGGCCAATTTGTATTA 59.621 34.615 7.24 0.00 0.00 0.98
814 2447 7.093596 TGTCATCATGTGGCCAATTTGTATTAA 60.094 33.333 7.24 0.00 0.00 1.40
815 2448 7.927629 GTCATCATGTGGCCAATTTGTATTAAT 59.072 33.333 7.24 0.00 0.00 1.40
816 2449 8.484575 TCATCATGTGGCCAATTTGTATTAATT 58.515 29.630 7.24 0.00 0.00 1.40
817 2450 8.767085 CATCATGTGGCCAATTTGTATTAATTC 58.233 33.333 7.24 0.00 0.00 2.17
873 2506 1.134936 GGACGCTCTCTTTCTCTTCCC 60.135 57.143 0.00 0.00 0.00 3.97
976 2617 5.783360 TCATGACCGAACCCCATATAAGTAT 59.217 40.000 0.00 0.00 0.00 2.12
1021 2662 0.692476 ACCATAGCAACACAGGCAGA 59.308 50.000 0.00 0.00 0.00 4.26
1256 2964 1.593787 CTCAGCGAGCCCTTCTTCA 59.406 57.895 0.00 0.00 0.00 3.02
1369 3089 9.645059 CAGTATATCGTTTCCATATGAGACATT 57.355 33.333 3.65 0.00 0.00 2.71
1497 3261 6.331061 ACTTTTGAATACTACTCCGTAGCAG 58.669 40.000 1.17 0.00 39.51 4.24
1499 3263 2.621998 TGAATACTACTCCGTAGCAGCC 59.378 50.000 1.17 0.00 39.51 4.85
1501 3265 2.133281 TACTACTCCGTAGCAGCCAA 57.867 50.000 1.17 0.00 39.51 4.52
1502 3266 0.531200 ACTACTCCGTAGCAGCCAAC 59.469 55.000 1.17 0.00 39.51 3.77
1505 3269 1.293498 CTCCGTAGCAGCCAACAGT 59.707 57.895 0.00 0.00 0.00 3.55
1506 3270 0.530744 CTCCGTAGCAGCCAACAGTA 59.469 55.000 0.00 0.00 0.00 2.74
1507 3271 0.245539 TCCGTAGCAGCCAACAGTAC 59.754 55.000 0.00 0.00 0.00 2.73
1509 3273 1.606994 CCGTAGCAGCCAACAGTACAA 60.607 52.381 0.00 0.00 0.00 2.41
1510 3274 2.139917 CGTAGCAGCCAACAGTACAAA 58.860 47.619 0.00 0.00 0.00 2.83
1511 3275 2.096417 CGTAGCAGCCAACAGTACAAAC 60.096 50.000 0.00 0.00 0.00 2.93
1545 3311 4.882671 AAATCAAACGAGCGATGCTATT 57.117 36.364 0.00 0.00 39.88 1.73
1546 3312 4.458951 AATCAAACGAGCGATGCTATTC 57.541 40.909 0.00 0.00 39.88 1.75
1547 3313 3.165058 TCAAACGAGCGATGCTATTCT 57.835 42.857 0.00 0.00 39.88 2.40
1548 3314 4.301637 TCAAACGAGCGATGCTATTCTA 57.698 40.909 0.00 0.00 39.88 2.10
1549 3315 4.678622 TCAAACGAGCGATGCTATTCTAA 58.321 39.130 0.00 0.00 39.88 2.10
1550 3316 5.289595 TCAAACGAGCGATGCTATTCTAAT 58.710 37.500 0.00 0.00 39.88 1.73
1551 3317 5.175673 TCAAACGAGCGATGCTATTCTAATG 59.824 40.000 0.00 0.00 39.88 1.90
1552 3318 4.244425 ACGAGCGATGCTATTCTAATGT 57.756 40.909 0.00 0.00 39.88 2.71
1553 3319 5.372547 ACGAGCGATGCTATTCTAATGTA 57.627 39.130 0.00 0.00 39.88 2.29
1554 3320 5.769367 ACGAGCGATGCTATTCTAATGTAA 58.231 37.500 0.00 0.00 39.88 2.41
1555 3321 6.390721 ACGAGCGATGCTATTCTAATGTAAT 58.609 36.000 0.00 0.00 39.88 1.89
1556 3322 6.309009 ACGAGCGATGCTATTCTAATGTAATG 59.691 38.462 0.00 0.00 39.88 1.90
1557 3323 6.528072 CGAGCGATGCTATTCTAATGTAATGA 59.472 38.462 0.00 0.00 39.88 2.57
1558 3324 7.221645 CGAGCGATGCTATTCTAATGTAATGAT 59.778 37.037 0.00 0.00 39.88 2.45
1559 3325 8.783833 AGCGATGCTATTCTAATGTAATGATT 57.216 30.769 0.00 0.00 36.99 2.57
1560 3326 9.224267 AGCGATGCTATTCTAATGTAATGATTT 57.776 29.630 0.00 0.00 36.99 2.17
1561 3327 9.831737 GCGATGCTATTCTAATGTAATGATTTT 57.168 29.630 0.00 0.00 0.00 1.82
1601 3367 1.068541 GTTCAATCTTGGGACGGTTGC 60.069 52.381 0.00 0.00 0.00 4.17
1602 3368 0.608035 TCAATCTTGGGACGGTTGCC 60.608 55.000 0.00 0.00 0.00 4.52
1644 3410 0.253160 TCCTGCCTCATGGTAAGGGT 60.253 55.000 1.42 0.00 38.82 4.34
1680 3446 7.984050 TCTGAAATCAAAATTGTACAAAAGGCA 59.016 29.630 13.23 0.00 0.00 4.75
1776 3559 1.772836 ATCCTCAGCCAATTTGCTCC 58.227 50.000 0.05 0.00 40.32 4.70
1778 3561 1.660560 CCTCAGCCAATTTGCTCCCG 61.661 60.000 0.05 0.00 40.32 5.14
1786 3569 1.315257 AATTTGCTCCCGCGCTTGAT 61.315 50.000 5.56 0.00 39.65 2.57
1787 3570 1.718757 ATTTGCTCCCGCGCTTGATC 61.719 55.000 5.56 0.00 39.65 2.92
1809 3592 2.888414 TCCTCAAGTGTGTGATCGTACA 59.112 45.455 0.00 0.00 0.00 2.90
1851 4306 0.739462 TTCGTTACCATGCAGCTCCG 60.739 55.000 0.00 0.00 0.00 4.63
1852 4307 2.173669 CGTTACCATGCAGCTCCGG 61.174 63.158 0.00 0.00 0.00 5.14
1869 4324 4.450122 GCCGTCGTGTGCAGCATG 62.450 66.667 0.00 0.00 40.87 4.06
1885 4340 2.797278 ATGCGCGTTCCCTCCTAGG 61.797 63.158 8.43 0.82 34.30 3.02
1890 4345 1.987855 CGTTCCCTCCTAGGCACCA 60.988 63.158 2.96 0.00 32.73 4.17
1891 4346 1.908483 GTTCCCTCCTAGGCACCAG 59.092 63.158 2.96 0.00 32.73 4.00
1892 4347 1.995626 TTCCCTCCTAGGCACCAGC 60.996 63.158 2.96 0.00 41.10 4.85
1893 4348 2.366167 CCCTCCTAGGCACCAGCT 60.366 66.667 2.96 0.00 41.70 4.24
1894 4349 2.739996 CCCTCCTAGGCACCAGCTG 61.740 68.421 6.78 6.78 41.70 4.24
1895 4350 2.739996 CCTCCTAGGCACCAGCTGG 61.740 68.421 31.60 31.60 41.70 4.85
1896 4351 3.397613 CTCCTAGGCACCAGCTGGC 62.398 68.421 33.06 19.28 46.14 4.85
1903 4358 4.363990 CACCAGCTGGCTCGTCGT 62.364 66.667 33.06 8.48 39.32 4.34
1904 4359 4.057428 ACCAGCTGGCTCGTCGTC 62.057 66.667 33.06 0.00 39.32 4.20
1905 4360 4.803426 CCAGCTGGCTCGTCGTCC 62.803 72.222 22.33 0.00 0.00 4.79
1950 4405 1.863454 CTTGCTGTCACACTCACAGTC 59.137 52.381 2.02 0.00 42.89 3.51
1956 4411 2.158914 TGTCACACTCACAGTCATTGCT 60.159 45.455 0.00 0.00 0.00 3.91
1964 4419 0.108585 ACAGTCATTGCTCCCGTTGT 59.891 50.000 0.00 0.00 0.00 3.32
1976 4431 1.377202 CCGTTGTAGCCATGGCAGT 60.377 57.895 37.18 21.14 44.88 4.40
2008 4464 3.353029 TGGCAACACCGTGCATCG 61.353 61.111 0.00 0.00 46.81 3.84
2009 4465 4.759096 GGCAACACCGTGCATCGC 62.759 66.667 0.00 0.00 46.81 4.58
2073 4531 1.148310 AAAACGATGCCAGTCTCACG 58.852 50.000 0.00 0.00 0.00 4.35
2074 4532 0.317160 AAACGATGCCAGTCTCACGA 59.683 50.000 0.00 0.00 0.00 4.35
2075 4533 0.532573 AACGATGCCAGTCTCACGAT 59.467 50.000 0.00 0.00 0.00 3.73
2076 4534 0.179127 ACGATGCCAGTCTCACGATG 60.179 55.000 0.00 0.00 0.00 3.84
2077 4535 0.179127 CGATGCCAGTCTCACGATGT 60.179 55.000 0.00 0.00 0.00 3.06
2078 4536 1.565305 GATGCCAGTCTCACGATGTC 58.435 55.000 0.00 0.00 0.00 3.06
2079 4537 0.897621 ATGCCAGTCTCACGATGTCA 59.102 50.000 0.00 0.00 0.00 3.58
2080 4538 0.244721 TGCCAGTCTCACGATGTCAG 59.755 55.000 0.00 0.00 0.00 3.51
2081 4539 0.244994 GCCAGTCTCACGATGTCAGT 59.755 55.000 0.00 0.00 0.00 3.41
2082 4540 1.988063 CCAGTCTCACGATGTCAGTG 58.012 55.000 0.00 0.00 40.71 3.66
2083 4541 1.541588 CCAGTCTCACGATGTCAGTGA 59.458 52.381 0.00 0.00 45.23 3.41
2084 4542 2.165234 CCAGTCTCACGATGTCAGTGAT 59.835 50.000 0.00 0.00 46.07 3.06
2085 4543 3.433709 CAGTCTCACGATGTCAGTGATC 58.566 50.000 0.00 0.00 46.07 2.92
2086 4544 3.128415 CAGTCTCACGATGTCAGTGATCT 59.872 47.826 0.00 0.21 46.07 2.75
2087 4545 3.376859 AGTCTCACGATGTCAGTGATCTC 59.623 47.826 0.00 0.00 46.07 2.75
2088 4546 3.376859 GTCTCACGATGTCAGTGATCTCT 59.623 47.826 0.00 0.00 46.07 3.10
2089 4547 3.625313 TCTCACGATGTCAGTGATCTCTC 59.375 47.826 0.00 0.00 46.07 3.20
2090 4548 3.615155 TCACGATGTCAGTGATCTCTCT 58.385 45.455 0.00 0.00 42.91 3.10
2091 4549 3.625313 TCACGATGTCAGTGATCTCTCTC 59.375 47.826 0.00 0.00 42.91 3.20
2092 4550 3.627123 CACGATGTCAGTGATCTCTCTCT 59.373 47.826 0.00 0.00 41.83 3.10
2093 4551 3.876914 ACGATGTCAGTGATCTCTCTCTC 59.123 47.826 0.00 0.00 0.00 3.20
2094 4552 4.129380 CGATGTCAGTGATCTCTCTCTCT 58.871 47.826 0.00 0.00 0.00 3.10
2095 4553 4.024641 CGATGTCAGTGATCTCTCTCTCTG 60.025 50.000 0.00 0.00 37.85 3.35
2096 4554 3.619419 TGTCAGTGATCTCTCTCTCTGG 58.381 50.000 0.00 0.00 37.36 3.86
2097 4555 3.010027 TGTCAGTGATCTCTCTCTCTGGT 59.990 47.826 0.00 0.00 37.36 4.00
2098 4556 4.016444 GTCAGTGATCTCTCTCTCTGGTT 58.984 47.826 0.00 0.00 37.36 3.67
2099 4557 4.462483 GTCAGTGATCTCTCTCTCTGGTTT 59.538 45.833 0.00 0.00 37.36 3.27
2100 4558 4.704540 TCAGTGATCTCTCTCTCTGGTTTC 59.295 45.833 0.00 0.00 37.36 2.78
2101 4559 4.462132 CAGTGATCTCTCTCTCTGGTTTCA 59.538 45.833 0.00 0.00 34.60 2.69
2102 4560 5.047448 CAGTGATCTCTCTCTCTGGTTTCAA 60.047 44.000 0.00 0.00 34.60 2.69
2103 4561 5.047377 AGTGATCTCTCTCTCTGGTTTCAAC 60.047 44.000 0.00 0.00 0.00 3.18
2104 4562 4.835056 TGATCTCTCTCTCTGGTTTCAACA 59.165 41.667 0.00 0.00 0.00 3.33
2105 4563 4.862902 TCTCTCTCTCTGGTTTCAACAG 57.137 45.455 0.00 0.00 37.30 3.16
2106 4564 4.474394 TCTCTCTCTCTGGTTTCAACAGA 58.526 43.478 0.00 0.00 42.31 3.41
2107 4565 4.895889 TCTCTCTCTCTGGTTTCAACAGAA 59.104 41.667 0.00 0.00 43.74 3.02
2108 4566 5.363868 TCTCTCTCTCTGGTTTCAACAGAAA 59.636 40.000 0.00 0.00 43.74 2.52
2109 4567 5.989477 TCTCTCTCTGGTTTCAACAGAAAA 58.011 37.500 0.00 0.00 43.74 2.29
2110 4568 6.414732 TCTCTCTCTGGTTTCAACAGAAAAA 58.585 36.000 0.00 0.00 43.74 1.94
2111 4569 6.316390 TCTCTCTCTGGTTTCAACAGAAAAAC 59.684 38.462 0.00 0.00 43.74 2.43
2112 4570 5.064707 TCTCTCTGGTTTCAACAGAAAAACG 59.935 40.000 0.00 0.00 43.74 3.60
2113 4571 3.765026 TCTGGTTTCAACAGAAAAACGC 58.235 40.909 0.00 0.00 41.66 4.84
2114 4572 2.520979 TGGTTTCAACAGAAAAACGCG 58.479 42.857 3.53 3.53 36.46 6.01
2115 4573 1.849829 GGTTTCAACAGAAAAACGCGG 59.150 47.619 12.47 0.00 36.46 6.46
2116 4574 2.521996 GTTTCAACAGAAAAACGCGGT 58.478 42.857 12.47 0.00 33.40 5.68
2117 4575 2.461897 TTCAACAGAAAAACGCGGTC 57.538 45.000 12.47 1.75 0.00 4.79
2118 4576 0.302288 TCAACAGAAAAACGCGGTCG 59.698 50.000 12.47 1.91 42.43 4.79
2128 4586 2.701006 CGCGGTCGTAGCATTTGG 59.299 61.111 0.00 0.00 34.19 3.28
2129 4587 2.403586 GCGGTCGTAGCATTTGGC 59.596 61.111 0.00 0.00 45.30 4.52
2138 4596 4.595629 GCATTTGGCTATGTCGCG 57.404 55.556 0.00 0.00 40.25 5.87
2139 4597 1.721487 GCATTTGGCTATGTCGCGT 59.279 52.632 5.77 0.00 40.25 6.01
2140 4598 0.316196 GCATTTGGCTATGTCGCGTC 60.316 55.000 5.77 0.00 40.25 5.19
2141 4599 1.290203 CATTTGGCTATGTCGCGTCT 58.710 50.000 5.77 0.00 0.00 4.18
2142 4600 1.258982 CATTTGGCTATGTCGCGTCTC 59.741 52.381 5.77 0.00 0.00 3.36
2143 4601 0.800683 TTTGGCTATGTCGCGTCTCG 60.801 55.000 5.77 0.00 40.15 4.04
2144 4602 1.929806 TTGGCTATGTCGCGTCTCGT 61.930 55.000 5.77 2.35 39.67 4.18
2145 4603 1.939785 GGCTATGTCGCGTCTCGTG 60.940 63.158 5.77 0.00 39.67 4.35
2146 4604 1.939785 GCTATGTCGCGTCTCGTGG 60.940 63.158 5.77 3.14 37.97 4.94
2147 4605 1.939785 CTATGTCGCGTCTCGTGGC 60.940 63.158 5.77 0.38 42.53 5.01
2148 4606 2.324332 CTATGTCGCGTCTCGTGGCT 62.324 60.000 5.77 0.00 42.66 4.75
2149 4607 1.929806 TATGTCGCGTCTCGTGGCTT 61.930 55.000 5.77 5.16 42.66 4.35
2150 4608 3.173240 GTCGCGTCTCGTGGCTTC 61.173 66.667 5.77 0.00 38.98 3.86
2151 4609 4.415332 TCGCGTCTCGTGGCTTCC 62.415 66.667 5.77 0.00 37.97 3.46
2154 4612 4.796231 CGTCTCGTGGCTTCCCCG 62.796 72.222 0.00 0.00 35.87 5.73
2155 4613 4.452733 GTCTCGTGGCTTCCCCGG 62.453 72.222 0.00 0.00 35.87 5.73
2182 4640 3.948719 GTTCCAGCACCCCCGACA 61.949 66.667 0.00 0.00 0.00 4.35
2183 4641 3.172106 TTCCAGCACCCCCGACAA 61.172 61.111 0.00 0.00 0.00 3.18
2184 4642 2.534396 TTCCAGCACCCCCGACAAT 61.534 57.895 0.00 0.00 0.00 2.71
2185 4643 2.438434 CCAGCACCCCCGACAATC 60.438 66.667 0.00 0.00 0.00 2.67
2186 4644 2.350895 CAGCACCCCCGACAATCA 59.649 61.111 0.00 0.00 0.00 2.57
2187 4645 2.040544 CAGCACCCCCGACAATCAC 61.041 63.158 0.00 0.00 0.00 3.06
2188 4646 2.750237 GCACCCCCGACAATCACC 60.750 66.667 0.00 0.00 0.00 4.02
2189 4647 2.435938 CACCCCCGACAATCACCG 60.436 66.667 0.00 0.00 0.00 4.94
2190 4648 2.926242 ACCCCCGACAATCACCGT 60.926 61.111 0.00 0.00 0.00 4.83
2191 4649 2.349755 CCCCCGACAATCACCGTT 59.650 61.111 0.00 0.00 0.00 4.44
2192 4650 2.038269 CCCCCGACAATCACCGTTG 61.038 63.158 0.00 0.00 35.25 4.10
2193 4651 2.686816 CCCCGACAATCACCGTTGC 61.687 63.158 0.00 0.00 32.32 4.17
2194 4652 1.963855 CCCGACAATCACCGTTGCA 60.964 57.895 0.00 0.00 32.32 4.08
2195 4653 1.497278 CCGACAATCACCGTTGCAG 59.503 57.895 0.00 0.00 32.32 4.41
2196 4654 1.154413 CGACAATCACCGTTGCAGC 60.154 57.895 0.00 0.00 32.32 5.25
2197 4655 1.154413 GACAATCACCGTTGCAGCG 60.154 57.895 16.72 16.72 32.32 5.18
2198 4656 2.502510 CAATCACCGTTGCAGCGC 60.503 61.111 18.28 0.00 0.00 5.92
2199 4657 2.977456 AATCACCGTTGCAGCGCA 60.977 55.556 18.28 3.65 36.47 6.09
2200 4658 2.334946 AATCACCGTTGCAGCGCAT 61.335 52.632 18.28 4.70 38.76 4.73
2201 4659 2.531927 AATCACCGTTGCAGCGCATG 62.532 55.000 18.28 16.92 38.76 4.06
2202 4660 4.764336 CACCGTTGCAGCGCATGG 62.764 66.667 18.28 6.11 38.76 3.66
2204 4662 4.764336 CCGTTGCAGCGCATGGTG 62.764 66.667 18.28 0.00 46.34 4.17
2213 4671 2.583319 CGCATGGTGCTCGTCGAT 60.583 61.111 0.00 0.00 42.25 3.59
2214 4672 2.580470 CGCATGGTGCTCGTCGATC 61.580 63.158 0.00 0.00 42.25 3.69
2215 4673 2.240500 GCATGGTGCTCGTCGATCC 61.241 63.158 0.00 0.00 40.96 3.36
2216 4674 1.592669 CATGGTGCTCGTCGATCCC 60.593 63.158 0.00 0.00 0.00 3.85
2217 4675 3.138930 ATGGTGCTCGTCGATCCCG 62.139 63.158 0.00 0.00 37.07 5.14
2218 4676 4.570663 GGTGCTCGTCGATCCCGG 62.571 72.222 0.00 0.00 36.24 5.73
2219 4677 3.515286 GTGCTCGTCGATCCCGGA 61.515 66.667 0.73 0.00 36.24 5.14
2220 4678 3.209812 TGCTCGTCGATCCCGGAG 61.210 66.667 0.73 0.00 36.24 4.63
2221 4679 4.632458 GCTCGTCGATCCCGGAGC 62.632 72.222 0.73 9.82 40.74 4.70
2222 4680 3.967335 CTCGTCGATCCCGGAGCC 61.967 72.222 0.73 0.00 36.24 4.70
2223 4681 4.501285 TCGTCGATCCCGGAGCCT 62.501 66.667 0.73 0.00 36.24 4.58
2224 4682 3.967335 CGTCGATCCCGGAGCCTC 61.967 72.222 0.73 0.00 36.24 4.70
2225 4683 2.519780 GTCGATCCCGGAGCCTCT 60.520 66.667 0.73 0.00 36.24 3.69
2226 4684 2.519541 TCGATCCCGGAGCCTCTG 60.520 66.667 0.73 0.00 36.24 3.35
2227 4685 4.292178 CGATCCCGGAGCCTCTGC 62.292 72.222 0.73 0.00 37.95 4.26
2228 4686 3.157252 GATCCCGGAGCCTCTGCA 61.157 66.667 0.73 0.00 41.13 4.41
2229 4687 2.688666 ATCCCGGAGCCTCTGCAA 60.689 61.111 0.73 0.00 41.13 4.08
2230 4688 2.932130 GATCCCGGAGCCTCTGCAAC 62.932 65.000 0.73 0.00 41.13 4.17
2231 4689 3.710722 CCCGGAGCCTCTGCAACT 61.711 66.667 0.73 0.00 41.13 3.16
2232 4690 2.348998 CCGGAGCCTCTGCAACTT 59.651 61.111 0.00 0.00 41.13 2.66
2233 4691 2.037136 CCGGAGCCTCTGCAACTTG 61.037 63.158 0.00 0.00 41.13 3.16
2234 4692 1.302033 CGGAGCCTCTGCAACTTGT 60.302 57.895 0.00 0.00 41.13 3.16
2235 4693 1.572085 CGGAGCCTCTGCAACTTGTG 61.572 60.000 0.00 0.00 41.13 3.33
2236 4694 0.536006 GGAGCCTCTGCAACTTGTGT 60.536 55.000 0.00 0.00 41.13 3.72
2237 4695 0.590195 GAGCCTCTGCAACTTGTGTG 59.410 55.000 0.00 0.00 41.13 3.82
2238 4696 1.008079 GCCTCTGCAACTTGTGTGC 60.008 57.895 0.00 0.00 37.47 4.57
2239 4697 1.280746 CCTCTGCAACTTGTGTGCG 59.719 57.895 0.00 0.00 0.00 5.34
2240 4698 1.280746 CTCTGCAACTTGTGTGCGG 59.719 57.895 0.00 0.00 36.36 5.69
2241 4699 2.121564 CTCTGCAACTTGTGTGCGGG 62.122 60.000 5.46 0.00 35.78 6.13
2242 4700 2.124529 TGCAACTTGTGTGCGGGA 60.125 55.556 0.00 0.00 0.00 5.14
2243 4701 2.121564 CTGCAACTTGTGTGCGGGAG 62.122 60.000 0.00 0.00 0.00 4.30
2244 4702 2.908073 GCAACTTGTGTGCGGGAGG 61.908 63.158 0.00 0.00 0.00 4.30
2245 4703 1.525995 CAACTTGTGTGCGGGAGGT 60.526 57.895 0.00 0.00 0.00 3.85
2246 4704 1.525995 AACTTGTGTGCGGGAGGTG 60.526 57.895 0.00 0.00 0.00 4.00
2247 4705 1.978455 AACTTGTGTGCGGGAGGTGA 61.978 55.000 0.00 0.00 0.00 4.02
2248 4706 1.669115 CTTGTGTGCGGGAGGTGAG 60.669 63.158 0.00 0.00 0.00 3.51
2249 4707 3.177194 TTGTGTGCGGGAGGTGAGG 62.177 63.158 0.00 0.00 0.00 3.86
2250 4708 3.311110 GTGTGCGGGAGGTGAGGA 61.311 66.667 0.00 0.00 0.00 3.71
2251 4709 2.284625 TGTGCGGGAGGTGAGGAT 60.285 61.111 0.00 0.00 0.00 3.24
2252 4710 2.187946 GTGCGGGAGGTGAGGATG 59.812 66.667 0.00 0.00 0.00 3.51
2253 4711 3.785859 TGCGGGAGGTGAGGATGC 61.786 66.667 0.00 0.00 0.00 3.91
2254 4712 4.899239 GCGGGAGGTGAGGATGCG 62.899 72.222 0.00 0.00 0.00 4.73
2255 4713 4.899239 CGGGAGGTGAGGATGCGC 62.899 72.222 0.00 0.00 0.00 6.09
2256 4714 4.554036 GGGAGGTGAGGATGCGCC 62.554 72.222 4.18 0.00 38.73 6.53
2257 4715 3.785859 GGAGGTGAGGATGCGCCA 61.786 66.667 4.18 0.00 40.91 5.69
2258 4716 2.202987 GAGGTGAGGATGCGCCAG 60.203 66.667 4.18 0.00 40.91 4.85
2259 4717 2.685017 AGGTGAGGATGCGCCAGA 60.685 61.111 4.18 0.00 40.91 3.86
2260 4718 2.244117 GAGGTGAGGATGCGCCAGAA 62.244 60.000 4.18 0.00 40.91 3.02
2261 4719 1.377202 GGTGAGGATGCGCCAGAAA 60.377 57.895 4.18 0.00 40.02 2.52
2262 4720 1.372087 GGTGAGGATGCGCCAGAAAG 61.372 60.000 4.18 0.00 40.02 2.62
2263 4721 0.674895 GTGAGGATGCGCCAGAAAGT 60.675 55.000 4.18 0.00 40.02 2.66
2264 4722 0.036732 TGAGGATGCGCCAGAAAGTT 59.963 50.000 4.18 0.00 40.02 2.66
2265 4723 0.729690 GAGGATGCGCCAGAAAGTTC 59.270 55.000 4.18 0.00 40.02 3.01
2266 4724 0.678048 AGGATGCGCCAGAAAGTTCC 60.678 55.000 4.18 0.00 40.02 3.62
2267 4725 1.657751 GGATGCGCCAGAAAGTTCCC 61.658 60.000 4.18 0.00 36.34 3.97
2268 4726 0.678048 GATGCGCCAGAAAGTTCCCT 60.678 55.000 4.18 0.00 0.00 4.20
2269 4727 0.251341 ATGCGCCAGAAAGTTCCCTT 60.251 50.000 4.18 0.00 0.00 3.95
2270 4728 0.398696 TGCGCCAGAAAGTTCCCTTA 59.601 50.000 4.18 0.00 0.00 2.69
2271 4729 1.004277 TGCGCCAGAAAGTTCCCTTAT 59.996 47.619 4.18 0.00 0.00 1.73
2272 4730 2.237643 TGCGCCAGAAAGTTCCCTTATA 59.762 45.455 4.18 0.00 0.00 0.98
2273 4731 2.872858 GCGCCAGAAAGTTCCCTTATAG 59.127 50.000 0.00 0.00 0.00 1.31
2274 4732 3.467803 CGCCAGAAAGTTCCCTTATAGG 58.532 50.000 0.00 0.00 34.30 2.57
2275 4733 3.118371 CGCCAGAAAGTTCCCTTATAGGT 60.118 47.826 0.00 0.00 31.93 3.08
2276 4734 4.452825 GCCAGAAAGTTCCCTTATAGGTC 58.547 47.826 0.00 0.00 31.93 3.85
2277 4735 4.080526 GCCAGAAAGTTCCCTTATAGGTCA 60.081 45.833 0.00 0.00 31.93 4.02
2278 4736 5.675538 CCAGAAAGTTCCCTTATAGGTCAG 58.324 45.833 0.00 0.00 31.93 3.51
2279 4737 5.396884 CCAGAAAGTTCCCTTATAGGTCAGG 60.397 48.000 0.00 0.00 31.93 3.86
2280 4738 4.164413 AGAAAGTTCCCTTATAGGTCAGGC 59.836 45.833 0.00 0.00 31.93 4.85
2281 4739 3.423058 AGTTCCCTTATAGGTCAGGCT 57.577 47.619 0.00 0.00 31.93 4.58
2282 4740 4.554553 AGTTCCCTTATAGGTCAGGCTA 57.445 45.455 0.00 0.00 31.93 3.93
2283 4741 4.224762 AGTTCCCTTATAGGTCAGGCTAC 58.775 47.826 0.00 0.00 31.93 3.58
2284 4742 3.965347 GTTCCCTTATAGGTCAGGCTACA 59.035 47.826 0.00 0.00 31.93 2.74
2285 4743 4.487282 TCCCTTATAGGTCAGGCTACAT 57.513 45.455 0.00 0.00 31.93 2.29
2286 4744 4.160329 TCCCTTATAGGTCAGGCTACATG 58.840 47.826 0.00 0.00 31.93 3.21
2287 4745 4.140782 TCCCTTATAGGTCAGGCTACATGA 60.141 45.833 0.00 0.00 31.93 3.07
2288 4746 4.593206 CCCTTATAGGTCAGGCTACATGAA 59.407 45.833 0.00 0.00 31.93 2.57
2289 4747 5.071788 CCCTTATAGGTCAGGCTACATGAAA 59.928 44.000 0.00 0.00 31.93 2.69
2290 4748 6.240002 CCCTTATAGGTCAGGCTACATGAAAT 60.240 42.308 0.00 0.00 31.93 2.17
2291 4749 6.876257 CCTTATAGGTCAGGCTACATGAAATC 59.124 42.308 0.00 0.00 0.00 2.17
2292 4750 7.256475 CCTTATAGGTCAGGCTACATGAAATCT 60.256 40.741 0.00 0.00 0.00 2.40
2293 4751 4.414337 AGGTCAGGCTACATGAAATCTC 57.586 45.455 0.00 0.00 0.00 2.75
2294 4752 4.036518 AGGTCAGGCTACATGAAATCTCT 58.963 43.478 0.00 0.00 0.00 3.10
2295 4753 4.472833 AGGTCAGGCTACATGAAATCTCTT 59.527 41.667 0.00 0.00 0.00 2.85
2296 4754 5.663106 AGGTCAGGCTACATGAAATCTCTTA 59.337 40.000 0.00 0.00 0.00 2.10
2297 4755 6.328672 AGGTCAGGCTACATGAAATCTCTTAT 59.671 38.462 0.00 0.00 0.00 1.73
2298 4756 6.648725 GGTCAGGCTACATGAAATCTCTTATC 59.351 42.308 0.00 0.00 0.00 1.75
2299 4757 6.648725 GTCAGGCTACATGAAATCTCTTATCC 59.351 42.308 0.00 0.00 0.00 2.59
2300 4758 6.556495 TCAGGCTACATGAAATCTCTTATCCT 59.444 38.462 0.00 0.00 0.00 3.24
2301 4759 6.873076 CAGGCTACATGAAATCTCTTATCCTC 59.127 42.308 0.00 0.00 0.00 3.71
2302 4760 6.556495 AGGCTACATGAAATCTCTTATCCTCA 59.444 38.462 0.00 0.00 0.00 3.86
2303 4761 7.071698 AGGCTACATGAAATCTCTTATCCTCAA 59.928 37.037 0.00 0.00 0.00 3.02
2304 4762 7.172361 GGCTACATGAAATCTCTTATCCTCAAC 59.828 40.741 0.00 0.00 0.00 3.18
2305 4763 7.172361 GCTACATGAAATCTCTTATCCTCAACC 59.828 40.741 0.00 0.00 0.00 3.77
2306 4764 6.360618 ACATGAAATCTCTTATCCTCAACCC 58.639 40.000 0.00 0.00 0.00 4.11
2307 4765 6.159398 ACATGAAATCTCTTATCCTCAACCCT 59.841 38.462 0.00 0.00 0.00 4.34
2308 4766 6.240549 TGAAATCTCTTATCCTCAACCCTC 57.759 41.667 0.00 0.00 0.00 4.30
2309 4767 5.131142 TGAAATCTCTTATCCTCAACCCTCC 59.869 44.000 0.00 0.00 0.00 4.30
2310 4768 3.776731 TCTCTTATCCTCAACCCTCCA 57.223 47.619 0.00 0.00 0.00 3.86
2311 4769 3.647636 TCTCTTATCCTCAACCCTCCAG 58.352 50.000 0.00 0.00 0.00 3.86
2312 4770 2.103941 CTCTTATCCTCAACCCTCCAGC 59.896 54.545 0.00 0.00 0.00 4.85
2313 4771 1.141858 CTTATCCTCAACCCTCCAGCC 59.858 57.143 0.00 0.00 0.00 4.85
2314 4772 0.343372 TATCCTCAACCCTCCAGCCT 59.657 55.000 0.00 0.00 0.00 4.58
2315 4773 0.551131 ATCCTCAACCCTCCAGCCTT 60.551 55.000 0.00 0.00 0.00 4.35
2316 4774 0.118346 TCCTCAACCCTCCAGCCTTA 59.882 55.000 0.00 0.00 0.00 2.69
2317 4775 0.253327 CCTCAACCCTCCAGCCTTAC 59.747 60.000 0.00 0.00 0.00 2.34
2318 4776 1.280457 CTCAACCCTCCAGCCTTACT 58.720 55.000 0.00 0.00 0.00 2.24
2319 4777 1.630878 CTCAACCCTCCAGCCTTACTT 59.369 52.381 0.00 0.00 0.00 2.24
2320 4778 2.040412 CTCAACCCTCCAGCCTTACTTT 59.960 50.000 0.00 0.00 0.00 2.66
2321 4779 2.162681 CAACCCTCCAGCCTTACTTTG 58.837 52.381 0.00 0.00 0.00 2.77
2322 4780 1.742308 ACCCTCCAGCCTTACTTTGA 58.258 50.000 0.00 0.00 0.00 2.69
2323 4781 1.630878 ACCCTCCAGCCTTACTTTGAG 59.369 52.381 0.00 0.00 0.00 3.02
2324 4782 1.909302 CCCTCCAGCCTTACTTTGAGA 59.091 52.381 0.00 0.00 29.66 3.27
2325 4783 2.507471 CCCTCCAGCCTTACTTTGAGAT 59.493 50.000 0.00 0.00 29.66 2.75
2326 4784 3.054065 CCCTCCAGCCTTACTTTGAGATT 60.054 47.826 0.00 0.00 29.66 2.40
2327 4785 4.568592 CCCTCCAGCCTTACTTTGAGATTT 60.569 45.833 0.00 0.00 29.66 2.17
2328 4786 4.397417 CCTCCAGCCTTACTTTGAGATTTG 59.603 45.833 0.00 0.00 29.66 2.32
2329 4787 4.985538 TCCAGCCTTACTTTGAGATTTGT 58.014 39.130 0.00 0.00 0.00 2.83
2330 4788 6.121776 TCCAGCCTTACTTTGAGATTTGTA 57.878 37.500 0.00 0.00 0.00 2.41
2331 4789 6.721318 TCCAGCCTTACTTTGAGATTTGTAT 58.279 36.000 0.00 0.00 0.00 2.29
2332 4790 7.175104 TCCAGCCTTACTTTGAGATTTGTATT 58.825 34.615 0.00 0.00 0.00 1.89
2333 4791 7.336931 TCCAGCCTTACTTTGAGATTTGTATTC 59.663 37.037 0.00 0.00 0.00 1.75
2334 4792 7.337942 CCAGCCTTACTTTGAGATTTGTATTCT 59.662 37.037 0.00 0.00 0.00 2.40
2335 4793 8.394121 CAGCCTTACTTTGAGATTTGTATTCTC 58.606 37.037 0.00 0.00 40.06 2.87
2336 4794 7.554476 AGCCTTACTTTGAGATTTGTATTCTCC 59.446 37.037 0.00 0.00 39.10 3.71
2337 4795 7.336931 GCCTTACTTTGAGATTTGTATTCTCCA 59.663 37.037 0.00 0.00 39.10 3.86
2338 4796 9.231297 CCTTACTTTGAGATTTGTATTCTCCAA 57.769 33.333 0.00 0.00 39.10 3.53
2340 4798 9.793259 TTACTTTGAGATTTGTATTCTCCAACT 57.207 29.630 0.00 0.00 39.10 3.16
2342 4800 9.793259 ACTTTGAGATTTGTATTCTCCAACTAA 57.207 29.630 0.00 0.00 39.10 2.24
2344 4802 9.793259 TTTGAGATTTGTATTCTCCAACTAACT 57.207 29.630 0.00 0.00 39.10 2.24
2345 4803 9.793259 TTGAGATTTGTATTCTCCAACTAACTT 57.207 29.630 0.00 0.00 39.10 2.66
2351 4809 9.616156 TTTGTATTCTCCAACTAACTTACAACA 57.384 29.630 0.00 0.00 30.51 3.33
2352 4810 9.616156 TTGTATTCTCCAACTAACTTACAACAA 57.384 29.630 0.00 0.00 0.00 2.83
2353 4811 9.268268 TGTATTCTCCAACTAACTTACAACAAG 57.732 33.333 0.00 0.00 0.00 3.16
2354 4812 6.613755 TTCTCCAACTAACTTACAACAAGC 57.386 37.500 0.00 0.00 0.00 4.01
2355 4813 5.676552 TCTCCAACTAACTTACAACAAGCA 58.323 37.500 0.00 0.00 0.00 3.91
2356 4814 5.758296 TCTCCAACTAACTTACAACAAGCAG 59.242 40.000 0.00 0.00 0.00 4.24
2357 4815 5.676552 TCCAACTAACTTACAACAAGCAGA 58.323 37.500 0.00 0.00 0.00 4.26
2358 4816 6.296026 TCCAACTAACTTACAACAAGCAGAT 58.704 36.000 0.00 0.00 0.00 2.90
2359 4817 6.770785 TCCAACTAACTTACAACAAGCAGATT 59.229 34.615 0.00 0.00 0.00 2.40
2360 4818 7.284489 TCCAACTAACTTACAACAAGCAGATTT 59.716 33.333 0.00 0.00 0.00 2.17
2361 4819 7.591426 CCAACTAACTTACAACAAGCAGATTTC 59.409 37.037 0.00 0.00 0.00 2.17
2362 4820 8.345565 CAACTAACTTACAACAAGCAGATTTCT 58.654 33.333 0.00 0.00 0.00 2.52
2363 4821 8.089115 ACTAACTTACAACAAGCAGATTTCTC 57.911 34.615 0.00 0.00 0.00 2.87
2364 4822 7.934120 ACTAACTTACAACAAGCAGATTTCTCT 59.066 33.333 0.00 0.00 0.00 3.10
2365 4823 7.573968 AACTTACAACAAGCAGATTTCTCTT 57.426 32.000 0.00 0.00 0.00 2.85
2366 4824 7.573968 ACTTACAACAAGCAGATTTCTCTTT 57.426 32.000 0.00 0.00 0.00 2.52
2367 4825 8.000780 ACTTACAACAAGCAGATTTCTCTTTT 57.999 30.769 0.00 0.00 0.00 2.27
2368 4826 8.470002 ACTTACAACAAGCAGATTTCTCTTTTT 58.530 29.630 0.00 0.00 0.00 1.94
2369 4827 8.856490 TTACAACAAGCAGATTTCTCTTTTTC 57.144 30.769 0.00 0.00 0.00 2.29
2370 4828 6.866480 ACAACAAGCAGATTTCTCTTTTTCA 58.134 32.000 0.00 0.00 0.00 2.69
2371 4829 6.976925 ACAACAAGCAGATTTCTCTTTTTCAG 59.023 34.615 0.00 0.00 0.00 3.02
2372 4830 6.081872 ACAAGCAGATTTCTCTTTTTCAGG 57.918 37.500 0.00 0.00 0.00 3.86
2373 4831 5.010415 ACAAGCAGATTTCTCTTTTTCAGGG 59.990 40.000 0.00 0.00 0.00 4.45
2374 4832 4.990526 AGCAGATTTCTCTTTTTCAGGGA 58.009 39.130 0.00 0.00 0.00 4.20
2375 4833 4.764308 AGCAGATTTCTCTTTTTCAGGGAC 59.236 41.667 0.00 0.00 28.24 4.46
2376 4834 4.378874 GCAGATTTCTCTTTTTCAGGGACG 60.379 45.833 0.00 0.00 28.24 4.79
2377 4835 4.997395 CAGATTTCTCTTTTTCAGGGACGA 59.003 41.667 0.00 0.00 28.24 4.20
2378 4836 5.645497 CAGATTTCTCTTTTTCAGGGACGAT 59.355 40.000 0.00 0.00 28.24 3.73
2379 4837 5.645497 AGATTTCTCTTTTTCAGGGACGATG 59.355 40.000 0.00 0.00 28.24 3.84
2380 4838 4.617253 TTCTCTTTTTCAGGGACGATGA 57.383 40.909 0.00 0.00 28.24 2.92
2381 4839 4.193826 TCTCTTTTTCAGGGACGATGAG 57.806 45.455 0.00 0.00 0.00 2.90
2382 4840 3.578716 TCTCTTTTTCAGGGACGATGAGT 59.421 43.478 0.00 0.00 0.00 3.41
2383 4841 4.040461 TCTCTTTTTCAGGGACGATGAGTT 59.960 41.667 0.00 0.00 0.00 3.01
2393 4851 2.159170 GGACGATGAGTTTGAGAGGGAG 60.159 54.545 0.00 0.00 0.00 4.30
2394 4852 2.755655 GACGATGAGTTTGAGAGGGAGA 59.244 50.000 0.00 0.00 0.00 3.71
2399 4857 1.552792 GAGTTTGAGAGGGAGAGGGTG 59.447 57.143 0.00 0.00 0.00 4.61
2401 4859 1.276705 GTTTGAGAGGGAGAGGGTGTC 59.723 57.143 0.00 0.00 0.00 3.67
2402 4860 0.612174 TTGAGAGGGAGAGGGTGTCG 60.612 60.000 0.00 0.00 0.00 4.35
2403 4861 2.363147 AGAGGGAGAGGGTGTCGC 60.363 66.667 0.00 0.00 0.00 5.19
2404 4862 3.462678 GAGGGAGAGGGTGTCGCC 61.463 72.222 0.00 0.00 44.31 5.54
2411 4869 2.600769 AGGGTGTCGCCGTCTTCT 60.601 61.111 0.00 0.00 38.44 2.85
2412 4870 2.126031 GGGTGTCGCCGTCTTCTC 60.126 66.667 0.00 0.00 38.44 2.87
2413 4871 2.126031 GGTGTCGCCGTCTTCTCC 60.126 66.667 0.00 0.00 0.00 3.71
2415 4873 4.415332 TGTCGCCGTCTTCTCCGC 62.415 66.667 0.00 0.00 0.00 5.54
2420 4878 3.470888 CCGTCTTCTCCGCCCCAT 61.471 66.667 0.00 0.00 0.00 4.00
2421 4879 2.202932 CGTCTTCTCCGCCCCATG 60.203 66.667 0.00 0.00 0.00 3.66
2422 4880 2.190578 GTCTTCTCCGCCCCATGG 59.809 66.667 4.14 4.14 0.00 3.66
2424 4882 2.124570 CTTCTCCGCCCCATGGTG 60.125 66.667 11.73 0.00 42.11 4.17
2431 4889 3.070576 GCCCCATGGTGGCTCAAC 61.071 66.667 27.77 7.31 45.70 3.18
2432 4890 2.362889 CCCCATGGTGGCTCAACC 60.363 66.667 11.73 0.00 40.94 3.77
2433 4891 2.765969 CCCATGGTGGCTCAACCT 59.234 61.111 11.73 0.00 41.16 3.50
2435 4893 0.107017 CCCATGGTGGCTCAACCTAG 60.107 60.000 11.73 0.00 41.16 3.02
2436 4894 0.749454 CCATGGTGGCTCAACCTAGC 60.749 60.000 2.57 0.00 41.16 3.42
2437 4895 0.035152 CATGGTGGCTCAACCTAGCA 60.035 55.000 0.00 0.00 44.64 3.49
2438 4896 0.254178 ATGGTGGCTCAACCTAGCAG 59.746 55.000 0.00 0.00 44.64 4.24
2440 4898 1.003355 GTGGCTCAACCTAGCAGCA 60.003 57.895 0.00 0.00 44.64 4.41
2441 4899 1.003355 TGGCTCAACCTAGCAGCAC 60.003 57.895 0.00 0.00 44.64 4.40
2442 4900 2.103042 GGCTCAACCTAGCAGCACG 61.103 63.158 0.00 0.00 44.64 5.34
2443 4901 2.103042 GCTCAACCTAGCAGCACGG 61.103 63.158 0.00 0.00 42.30 4.94
2444 4902 2.047274 TCAACCTAGCAGCACGGC 60.047 61.111 0.00 0.00 0.00 5.68
2445 4903 3.127533 CAACCTAGCAGCACGGCC 61.128 66.667 0.00 0.00 0.00 6.13
2447 4905 2.895424 AACCTAGCAGCACGGCCTT 61.895 57.895 0.00 0.00 0.00 4.35
2448 4906 2.821366 CCTAGCAGCACGGCCTTG 60.821 66.667 4.51 4.51 0.00 3.61
2449 4907 2.046892 CTAGCAGCACGGCCTTGT 60.047 61.111 11.38 0.00 0.00 3.16
2450 4908 2.047274 TAGCAGCACGGCCTTGTC 60.047 61.111 11.38 3.42 0.00 3.18
2452 4910 2.184020 TAGCAGCACGGCCTTGTCAT 62.184 55.000 11.38 0.00 0.00 3.06
2454 4912 1.968017 CAGCACGGCCTTGTCATGT 60.968 57.895 11.38 0.00 0.00 3.21
2455 4913 1.672356 AGCACGGCCTTGTCATGTC 60.672 57.895 11.38 0.00 0.00 3.06
2456 4914 3.027170 GCACGGCCTTGTCATGTCG 62.027 63.158 11.38 0.00 0.00 4.35
2457 4915 2.047274 ACGGCCTTGTCATGTCGG 60.047 61.111 0.00 0.00 0.00 4.79
2458 4916 2.047274 CGGCCTTGTCATGTCGGT 60.047 61.111 0.00 0.00 0.00 4.69
2459 4917 2.100631 CGGCCTTGTCATGTCGGTC 61.101 63.158 0.00 0.00 0.00 4.79
2460 4918 2.100631 GGCCTTGTCATGTCGGTCG 61.101 63.158 0.00 0.00 0.00 4.79
2461 4919 2.740714 GCCTTGTCATGTCGGTCGC 61.741 63.158 0.00 0.00 0.00 5.19
2462 4920 1.079819 CCTTGTCATGTCGGTCGCT 60.080 57.895 0.00 0.00 0.00 4.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.650778 GGCTTTCGTTTGGGCCTG 59.349 61.111 4.53 0.00 41.20 4.85
1 2 2.600470 GGGCTTTCGTTTGGGCCT 60.600 61.111 4.53 0.00 43.62 5.19
2 3 2.600470 AGGGCTTTCGTTTGGGCC 60.600 61.111 0.00 0.00 44.57 5.80
3 4 1.744320 AACAGGGCTTTCGTTTGGGC 61.744 55.000 0.00 0.00 0.00 5.36
6 7 3.436700 AGAAAACAGGGCTTTCGTTTG 57.563 42.857 0.00 0.00 37.76 2.93
7 8 4.204799 AGTAGAAAACAGGGCTTTCGTTT 58.795 39.130 0.00 0.00 37.76 3.60
8 9 3.816994 AGTAGAAAACAGGGCTTTCGTT 58.183 40.909 0.00 0.00 37.76 3.85
9 10 3.487120 AGTAGAAAACAGGGCTTTCGT 57.513 42.857 0.00 0.00 37.76 3.85
10 11 4.389077 CACTAGTAGAAAACAGGGCTTTCG 59.611 45.833 3.59 0.00 37.76 3.46
11 12 5.306394 ACACTAGTAGAAAACAGGGCTTTC 58.694 41.667 3.59 0.00 33.75 2.62
12 13 5.306114 ACACTAGTAGAAAACAGGGCTTT 57.694 39.130 3.59 0.00 0.00 3.51
13 14 4.262938 GGACACTAGTAGAAAACAGGGCTT 60.263 45.833 3.59 0.00 0.00 4.35
14 15 3.261137 GGACACTAGTAGAAAACAGGGCT 59.739 47.826 3.59 0.00 0.00 5.19
15 16 3.261137 AGGACACTAGTAGAAAACAGGGC 59.739 47.826 3.59 0.00 0.00 5.19
16 17 4.527038 TGAGGACACTAGTAGAAAACAGGG 59.473 45.833 3.59 0.00 0.00 4.45
17 18 5.723672 TGAGGACACTAGTAGAAAACAGG 57.276 43.478 3.59 0.00 0.00 4.00
18 19 7.164230 AGATGAGGACACTAGTAGAAAACAG 57.836 40.000 3.59 0.00 0.00 3.16
19 20 8.645814 TTAGATGAGGACACTAGTAGAAAACA 57.354 34.615 3.59 0.00 0.00 2.83
22 23 9.475620 TCATTTAGATGAGGACACTAGTAGAAA 57.524 33.333 3.59 0.00 37.37 2.52
108 109 9.985730 ATTTCTGTTTCAATTAATGCTTTGAGA 57.014 25.926 0.00 0.00 33.68 3.27
219 225 6.013725 ACCTCAACAACACAGGTATAATCTCA 60.014 38.462 0.00 0.00 38.86 3.27
334 1920 1.370609 GAGATGACTCCGTCTCGTCA 58.629 55.000 0.00 0.00 43.26 4.35
433 2020 3.672808 ACATCTTCACTCAAGCCTTCTG 58.327 45.455 0.00 0.00 31.26 3.02
459 2046 0.392193 TCCGTCTCTACACCGACCTC 60.392 60.000 0.00 0.00 0.00 3.85
473 2060 3.071206 TCCTGCTCCTGCTCCGTC 61.071 66.667 0.00 0.00 40.48 4.79
474 2061 3.073735 CTCCTGCTCCTGCTCCGT 61.074 66.667 0.00 0.00 40.48 4.69
487 2074 1.634459 TCTACACCGACCTCTTCTCCT 59.366 52.381 0.00 0.00 0.00 3.69
488 2075 2.018515 CTCTACACCGACCTCTTCTCC 58.981 57.143 0.00 0.00 0.00 3.71
489 2076 2.018515 CCTCTACACCGACCTCTTCTC 58.981 57.143 0.00 0.00 0.00 2.87
490 2077 1.341187 CCCTCTACACCGACCTCTTCT 60.341 57.143 0.00 0.00 0.00 2.85
491 2078 1.104630 CCCTCTACACCGACCTCTTC 58.895 60.000 0.00 0.00 0.00 2.87
492 2079 0.408700 ACCCTCTACACCGACCTCTT 59.591 55.000 0.00 0.00 0.00 2.85
533 2120 0.179189 CCGTTTCTTCATTGAGCCGC 60.179 55.000 0.00 0.00 0.00 6.53
534 2121 0.447801 CCCGTTTCTTCATTGAGCCG 59.552 55.000 0.00 0.00 0.00 5.52
536 2123 1.128692 CGTCCCGTTTCTTCATTGAGC 59.871 52.381 0.00 0.00 0.00 4.26
537 2124 2.412089 GTCGTCCCGTTTCTTCATTGAG 59.588 50.000 0.00 0.00 0.00 3.02
542 2140 1.007038 CCGTCGTCCCGTTTCTTCA 60.007 57.895 0.00 0.00 0.00 3.02
558 2156 1.335964 TGTTCGTTCTCTCTGCTTCCG 60.336 52.381 0.00 0.00 0.00 4.30
620 2234 5.107824 GGATTAGAAGTAAACACCGACTCC 58.892 45.833 0.00 0.00 0.00 3.85
687 2302 5.277731 GGGAACTACTACTTACTTCGGATCG 60.278 48.000 0.00 0.00 0.00 3.69
720 2342 4.196626 TGTTTACCCTACTTCGGTGATG 57.803 45.455 0.00 0.00 34.66 3.07
721 2343 4.224370 ACATGTTTACCCTACTTCGGTGAT 59.776 41.667 0.00 0.00 34.66 3.06
722 2344 3.579586 ACATGTTTACCCTACTTCGGTGA 59.420 43.478 0.00 0.00 34.66 4.02
723 2345 3.934068 ACATGTTTACCCTACTTCGGTG 58.066 45.455 0.00 0.00 34.66 4.94
724 2346 4.202388 ACAACATGTTTACCCTACTTCGGT 60.202 41.667 8.77 0.00 37.40 4.69
725 2347 4.320870 ACAACATGTTTACCCTACTTCGG 58.679 43.478 8.77 0.00 0.00 4.30
727 2349 6.313164 GCTCTACAACATGTTTACCCTACTTC 59.687 42.308 8.77 0.00 0.00 3.01
728 2350 6.171213 GCTCTACAACATGTTTACCCTACTT 58.829 40.000 8.77 0.00 0.00 2.24
729 2351 5.247564 TGCTCTACAACATGTTTACCCTACT 59.752 40.000 8.77 0.00 0.00 2.57
730 2352 5.484715 TGCTCTACAACATGTTTACCCTAC 58.515 41.667 8.77 0.00 0.00 3.18
731 2353 5.748670 TGCTCTACAACATGTTTACCCTA 57.251 39.130 8.77 0.00 0.00 3.53
732 2354 4.634012 TGCTCTACAACATGTTTACCCT 57.366 40.909 8.77 0.00 0.00 4.34
733 2355 5.527582 CCTATGCTCTACAACATGTTTACCC 59.472 44.000 8.77 0.00 0.00 3.69
734 2356 5.007724 GCCTATGCTCTACAACATGTTTACC 59.992 44.000 8.77 0.00 33.53 2.85
735 2357 6.049263 GCCTATGCTCTACAACATGTTTAC 57.951 41.667 8.77 0.00 33.53 2.01
751 2373 1.037579 GGGTGTCCCAAAGCCTATGC 61.038 60.000 0.00 0.00 44.65 3.14
752 2374 3.191182 GGGTGTCCCAAAGCCTATG 57.809 57.895 0.00 0.00 44.65 2.23
763 2385 2.235650 GGAACTACTACTTGGGGTGTCC 59.764 54.545 0.00 0.00 0.00 4.02
764 2386 3.171528 AGGAACTACTACTTGGGGTGTC 58.828 50.000 0.00 0.00 36.02 3.67
765 2387 3.171528 GAGGAACTACTACTTGGGGTGT 58.828 50.000 0.00 0.00 41.55 4.16
766 2388 2.165845 CGAGGAACTACTACTTGGGGTG 59.834 54.545 0.00 0.00 41.55 4.61
767 2389 2.225217 ACGAGGAACTACTACTTGGGGT 60.225 50.000 0.00 0.00 41.55 4.95
768 2390 2.165845 CACGAGGAACTACTACTTGGGG 59.834 54.545 0.00 0.00 41.55 4.96
769 2391 2.824341 ACACGAGGAACTACTACTTGGG 59.176 50.000 0.00 0.00 41.55 4.12
770 2392 3.504906 TGACACGAGGAACTACTACTTGG 59.495 47.826 0.00 0.00 41.55 3.61
771 2393 4.761235 TGACACGAGGAACTACTACTTG 57.239 45.455 0.00 0.00 41.55 3.16
958 2593 4.000988 GTGCATACTTATATGGGGTTCGG 58.999 47.826 0.00 0.00 38.97 4.30
959 2594 3.678072 CGTGCATACTTATATGGGGTTCG 59.322 47.826 0.00 0.00 38.97 3.95
960 2595 4.689345 GTCGTGCATACTTATATGGGGTTC 59.311 45.833 0.00 0.00 38.97 3.62
1000 2641 1.888512 CTGCCTGTGTTGCTATGGTTT 59.111 47.619 0.00 0.00 0.00 3.27
1001 2642 1.073763 TCTGCCTGTGTTGCTATGGTT 59.926 47.619 0.00 0.00 0.00 3.67
1021 2662 1.702886 CGTGCGTGAAGAAGATGTCT 58.297 50.000 0.00 0.00 38.69 3.41
1162 2864 1.019805 GCTGCCGGTACTGGTCTTTC 61.020 60.000 21.95 5.51 0.00 2.62
1241 2949 2.267324 GCTGAAGAAGGGCTCGCT 59.733 61.111 0.00 0.00 0.00 4.93
1256 2964 1.613630 AGTCACCCTTGGATCCGCT 60.614 57.895 7.39 0.00 0.00 5.52
1298 3006 1.604755 GATGATCTACTGCGACTCGGT 59.395 52.381 0.00 0.00 38.08 4.69
1365 3085 8.245195 ACAAGACCCAACAAAATTACTAATGT 57.755 30.769 0.00 0.00 0.00 2.71
1369 3089 8.528044 AGAAACAAGACCCAACAAAATTACTA 57.472 30.769 0.00 0.00 0.00 1.82
1378 3098 3.454447 TCAGAGAGAAACAAGACCCAACA 59.546 43.478 0.00 0.00 0.00 3.33
1493 3257 0.944386 CGTTTGTACTGTTGGCTGCT 59.056 50.000 0.00 0.00 0.00 4.24
1497 3261 2.286772 CCACTTCGTTTGTACTGTTGGC 60.287 50.000 0.00 0.00 0.00 4.52
1499 3263 4.868450 TTCCACTTCGTTTGTACTGTTG 57.132 40.909 0.00 0.00 0.00 3.33
1501 3265 7.556733 TTAATTTCCACTTCGTTTGTACTGT 57.443 32.000 0.00 0.00 0.00 3.55
1502 3266 9.113876 GATTTAATTTCCACTTCGTTTGTACTG 57.886 33.333 0.00 0.00 0.00 2.74
1506 3270 8.813282 GTTTGATTTAATTTCCACTTCGTTTGT 58.187 29.630 0.00 0.00 0.00 2.83
1507 3271 7.995998 CGTTTGATTTAATTTCCACTTCGTTTG 59.004 33.333 0.00 0.00 0.00 2.93
1509 3273 7.419204 TCGTTTGATTTAATTTCCACTTCGTT 58.581 30.769 0.00 0.00 0.00 3.85
1510 3274 6.961576 TCGTTTGATTTAATTTCCACTTCGT 58.038 32.000 0.00 0.00 0.00 3.85
1511 3275 6.032460 GCTCGTTTGATTTAATTTCCACTTCG 59.968 38.462 0.00 0.00 0.00 3.79
1569 3335 9.832445 GTCCCAAGATTGAACTAATACATAAGA 57.168 33.333 0.00 0.00 0.00 2.10
1601 3367 0.250553 TACCTGAGCAAAACGGGTGG 60.251 55.000 0.00 0.00 45.27 4.61
1602 3368 1.156736 CTACCTGAGCAAAACGGGTG 58.843 55.000 0.00 0.00 45.27 4.61
1776 3559 1.153568 TTGAGGAGATCAAGCGCGG 60.154 57.895 8.83 0.00 43.09 6.46
1786 3569 2.239400 ACGATCACACACTTGAGGAGA 58.761 47.619 0.00 0.00 0.00 3.71
1787 3570 2.732412 ACGATCACACACTTGAGGAG 57.268 50.000 0.00 0.00 0.00 3.69
1823 3606 2.159382 CATGGTAACGAAAGCCAGGTT 58.841 47.619 0.00 0.00 42.51 3.50
1824 3607 1.821216 CATGGTAACGAAAGCCAGGT 58.179 50.000 0.00 0.00 42.51 4.00
1852 4307 4.450122 CATGCTGCACACGACGGC 62.450 66.667 3.57 0.00 39.96 5.68
1867 4322 2.797278 CCTAGGAGGGAACGCGCAT 61.797 63.158 5.73 0.00 0.00 4.73
1869 4324 4.893601 GCCTAGGAGGGAACGCGC 62.894 72.222 14.75 0.00 35.37 6.86
1870 4325 3.458163 TGCCTAGGAGGGAACGCG 61.458 66.667 14.75 3.53 35.37 6.01
1875 4330 2.365635 GCTGGTGCCTAGGAGGGA 60.366 66.667 14.75 0.00 35.37 4.20
1925 4380 4.030452 GTGTGACAGCAAGGCGGC 62.030 66.667 0.00 0.00 0.00 6.53
1926 4381 2.281070 AGTGTGACAGCAAGGCGG 60.281 61.111 0.00 0.00 0.00 6.13
1927 4382 1.595109 TGAGTGTGACAGCAAGGCG 60.595 57.895 0.00 0.00 0.00 5.52
1928 4383 0.815213 TGTGAGTGTGACAGCAAGGC 60.815 55.000 0.00 0.00 0.00 4.35
1929 4384 1.224075 CTGTGAGTGTGACAGCAAGG 58.776 55.000 0.00 0.00 34.77 3.61
1930 4385 1.863454 GACTGTGAGTGTGACAGCAAG 59.137 52.381 0.00 0.00 44.01 4.01
1931 4386 1.206849 TGACTGTGAGTGTGACAGCAA 59.793 47.619 0.00 0.00 44.01 3.91
1932 4387 0.823460 TGACTGTGAGTGTGACAGCA 59.177 50.000 0.00 0.00 44.01 4.41
1950 4405 0.676466 TGGCTACAACGGGAGCAATG 60.676 55.000 0.83 0.00 40.64 2.82
1956 4411 2.270850 GCCATGGCTACAACGGGA 59.729 61.111 29.98 0.00 38.26 5.14
2005 4461 3.277133 GTGTTGGCACATGGCGAT 58.723 55.556 0.00 0.00 46.16 4.58
2067 4525 3.615155 AGAGATCACTGACATCGTGAGA 58.385 45.455 0.00 0.00 43.82 3.27
2068 4526 3.627123 AGAGAGATCACTGACATCGTGAG 59.373 47.826 0.00 0.00 43.82 3.51
2069 4527 3.615155 AGAGAGATCACTGACATCGTGA 58.385 45.455 0.00 0.48 44.59 4.35
2070 4528 3.627123 AGAGAGAGATCACTGACATCGTG 59.373 47.826 0.00 0.00 0.00 4.35
2071 4529 3.876914 GAGAGAGAGATCACTGACATCGT 59.123 47.826 0.00 0.00 0.00 3.73
2072 4530 4.024641 CAGAGAGAGAGATCACTGACATCG 60.025 50.000 0.00 0.00 39.43 3.84
2073 4531 4.276678 CCAGAGAGAGAGATCACTGACATC 59.723 50.000 0.00 0.00 39.43 3.06
2074 4532 4.209538 CCAGAGAGAGAGATCACTGACAT 58.790 47.826 0.00 0.00 39.43 3.06
2075 4533 3.010027 ACCAGAGAGAGAGATCACTGACA 59.990 47.826 0.00 0.00 39.43 3.58
2076 4534 3.620488 ACCAGAGAGAGAGATCACTGAC 58.380 50.000 0.00 0.00 39.43 3.51
2077 4535 4.314522 AACCAGAGAGAGAGATCACTGA 57.685 45.455 0.00 0.00 39.43 3.41
2078 4536 4.462132 TGAAACCAGAGAGAGAGATCACTG 59.538 45.833 0.00 0.00 37.57 3.66
2079 4537 4.671831 TGAAACCAGAGAGAGAGATCACT 58.328 43.478 0.00 0.00 0.00 3.41
2080 4538 5.167845 GTTGAAACCAGAGAGAGAGATCAC 58.832 45.833 0.00 0.00 0.00 3.06
2081 4539 4.835056 TGTTGAAACCAGAGAGAGAGATCA 59.165 41.667 0.00 0.00 0.00 2.92
2082 4540 5.184864 TCTGTTGAAACCAGAGAGAGAGATC 59.815 44.000 0.00 0.00 0.00 2.75
2083 4541 5.083122 TCTGTTGAAACCAGAGAGAGAGAT 58.917 41.667 0.00 0.00 0.00 2.75
2084 4542 4.474394 TCTGTTGAAACCAGAGAGAGAGA 58.526 43.478 0.00 0.00 0.00 3.10
2085 4543 4.862902 TCTGTTGAAACCAGAGAGAGAG 57.137 45.455 0.00 0.00 0.00 3.20
2086 4544 5.614324 TTTCTGTTGAAACCAGAGAGAGA 57.386 39.130 0.00 0.00 37.27 3.10
2087 4545 6.490534 GTTTTTCTGTTGAAACCAGAGAGAG 58.509 40.000 0.00 0.00 41.34 3.20
2088 4546 5.064707 CGTTTTTCTGTTGAAACCAGAGAGA 59.935 40.000 0.00 0.00 41.34 3.10
2089 4547 5.266242 CGTTTTTCTGTTGAAACCAGAGAG 58.734 41.667 0.00 0.00 41.34 3.20
2090 4548 4.438200 GCGTTTTTCTGTTGAAACCAGAGA 60.438 41.667 0.00 0.00 41.34 3.10
2091 4549 3.791353 GCGTTTTTCTGTTGAAACCAGAG 59.209 43.478 0.00 0.00 41.34 3.35
2092 4550 3.729462 CGCGTTTTTCTGTTGAAACCAGA 60.729 43.478 0.00 0.00 41.34 3.86
2093 4551 2.529894 CGCGTTTTTCTGTTGAAACCAG 59.470 45.455 0.00 0.00 41.34 4.00
2094 4552 2.520979 CGCGTTTTTCTGTTGAAACCA 58.479 42.857 0.00 0.00 41.34 3.67
2095 4553 1.849829 CCGCGTTTTTCTGTTGAAACC 59.150 47.619 4.92 0.00 41.34 3.27
2096 4554 2.521996 ACCGCGTTTTTCTGTTGAAAC 58.478 42.857 4.92 0.00 41.34 2.78
2097 4555 2.788030 GACCGCGTTTTTCTGTTGAAA 58.212 42.857 4.92 0.00 40.08 2.69
2098 4556 1.267632 CGACCGCGTTTTTCTGTTGAA 60.268 47.619 4.92 0.00 0.00 2.69
2099 4557 0.302288 CGACCGCGTTTTTCTGTTGA 59.698 50.000 4.92 0.00 0.00 3.18
2100 4558 2.765814 CGACCGCGTTTTTCTGTTG 58.234 52.632 4.92 0.00 0.00 3.33
2111 4569 2.701006 CCAAATGCTACGACCGCG 59.299 61.111 0.00 0.00 44.79 6.46
2112 4570 2.403586 GCCAAATGCTACGACCGC 59.596 61.111 0.00 0.00 36.87 5.68
2121 4579 0.316196 GACGCGACATAGCCAAATGC 60.316 55.000 15.93 0.00 41.71 3.56
2122 4580 1.258982 GAGACGCGACATAGCCAAATG 59.741 52.381 15.93 0.00 0.00 2.32
2123 4581 1.571919 GAGACGCGACATAGCCAAAT 58.428 50.000 15.93 0.00 0.00 2.32
2124 4582 0.800683 CGAGACGCGACATAGCCAAA 60.801 55.000 15.93 0.00 44.57 3.28
2125 4583 1.226575 CGAGACGCGACATAGCCAA 60.227 57.895 15.93 0.00 44.57 4.52
2126 4584 2.404186 ACGAGACGCGACATAGCCA 61.404 57.895 15.93 0.00 44.57 4.75
2127 4585 1.939785 CACGAGACGCGACATAGCC 60.940 63.158 15.93 0.00 44.57 3.93
2128 4586 1.939785 CCACGAGACGCGACATAGC 60.940 63.158 15.93 0.00 44.57 2.97
2129 4587 1.939785 GCCACGAGACGCGACATAG 60.940 63.158 15.93 4.64 44.57 2.23
2130 4588 1.929806 AAGCCACGAGACGCGACATA 61.930 55.000 15.93 0.00 44.57 2.29
2131 4589 3.282745 AAGCCACGAGACGCGACAT 62.283 57.895 15.93 0.00 44.57 3.06
2132 4590 3.891586 GAAGCCACGAGACGCGACA 62.892 63.158 15.93 0.00 44.57 4.35
2133 4591 3.173240 GAAGCCACGAGACGCGAC 61.173 66.667 15.93 6.86 44.57 5.19
2134 4592 4.415332 GGAAGCCACGAGACGCGA 62.415 66.667 15.93 0.00 44.57 5.87
2165 4623 2.764637 ATTGTCGGGGGTGCTGGAAC 62.765 60.000 0.00 0.00 0.00 3.62
2166 4624 2.478335 GATTGTCGGGGGTGCTGGAA 62.478 60.000 0.00 0.00 0.00 3.53
2167 4625 2.933287 ATTGTCGGGGGTGCTGGA 60.933 61.111 0.00 0.00 0.00 3.86
2168 4626 2.438434 GATTGTCGGGGGTGCTGG 60.438 66.667 0.00 0.00 0.00 4.85
2169 4627 2.040544 GTGATTGTCGGGGGTGCTG 61.041 63.158 0.00 0.00 0.00 4.41
2170 4628 2.351276 GTGATTGTCGGGGGTGCT 59.649 61.111 0.00 0.00 0.00 4.40
2171 4629 2.750237 GGTGATTGTCGGGGGTGC 60.750 66.667 0.00 0.00 0.00 5.01
2172 4630 2.435938 CGGTGATTGTCGGGGGTG 60.436 66.667 0.00 0.00 0.00 4.61
2173 4631 2.522367 AACGGTGATTGTCGGGGGT 61.522 57.895 0.00 0.00 0.00 4.95
2174 4632 2.038269 CAACGGTGATTGTCGGGGG 61.038 63.158 0.00 0.00 0.00 5.40
2175 4633 2.686816 GCAACGGTGATTGTCGGGG 61.687 63.158 3.55 0.00 31.83 5.73
2176 4634 1.911293 CTGCAACGGTGATTGTCGGG 61.911 60.000 3.55 0.00 31.83 5.14
2177 4635 1.497278 CTGCAACGGTGATTGTCGG 59.503 57.895 3.55 0.00 31.83 4.79
2178 4636 1.154413 GCTGCAACGGTGATTGTCG 60.154 57.895 3.55 0.00 31.83 4.35
2179 4637 1.154413 CGCTGCAACGGTGATTGTC 60.154 57.895 3.55 0.00 31.83 3.18
2180 4638 2.945984 CGCTGCAACGGTGATTGT 59.054 55.556 3.55 0.00 31.83 2.71
2181 4639 2.502510 GCGCTGCAACGGTGATTG 60.503 61.111 12.02 0.00 0.00 2.67
2182 4640 2.334946 ATGCGCTGCAACGGTGATT 61.335 52.632 12.02 0.00 43.62 2.57
2183 4641 2.747460 ATGCGCTGCAACGGTGAT 60.747 55.556 12.02 0.00 43.62 3.06
2184 4642 3.725459 CATGCGCTGCAACGGTGA 61.725 61.111 12.02 0.00 43.62 4.02
2185 4643 4.764336 CCATGCGCTGCAACGGTG 62.764 66.667 12.02 0.00 43.62 4.94
2187 4645 4.764336 CACCATGCGCTGCAACGG 62.764 66.667 12.02 15.62 43.62 4.44
2197 4655 2.240500 GGATCGACGAGCACCATGC 61.241 63.158 15.82 0.00 45.46 4.06
2198 4656 1.592669 GGGATCGACGAGCACCATG 60.593 63.158 15.82 0.00 0.00 3.66
2199 4657 2.815308 GGGATCGACGAGCACCAT 59.185 61.111 15.82 0.00 0.00 3.55
2200 4658 3.822192 CGGGATCGACGAGCACCA 61.822 66.667 15.82 0.00 39.00 4.17
2201 4659 4.570663 CCGGGATCGACGAGCACC 62.571 72.222 15.82 12.30 39.00 5.01
2202 4660 3.471244 CTCCGGGATCGACGAGCAC 62.471 68.421 15.82 10.82 39.00 4.40
2203 4661 3.209812 CTCCGGGATCGACGAGCA 61.210 66.667 15.82 0.00 39.00 4.26
2204 4662 4.632458 GCTCCGGGATCGACGAGC 62.632 72.222 4.11 4.11 41.05 5.03
2205 4663 3.967335 GGCTCCGGGATCGACGAG 61.967 72.222 0.00 4.01 39.00 4.18
2206 4664 4.501285 AGGCTCCGGGATCGACGA 62.501 66.667 0.00 0.00 39.00 4.20
2207 4665 3.967335 GAGGCTCCGGGATCGACG 61.967 72.222 2.15 1.85 39.00 5.12
2208 4666 2.519780 AGAGGCTCCGGGATCGAC 60.520 66.667 11.71 0.00 39.00 4.20
2209 4667 2.519541 CAGAGGCTCCGGGATCGA 60.520 66.667 11.71 0.00 39.00 3.59
2210 4668 4.292178 GCAGAGGCTCCGGGATCG 62.292 72.222 11.71 0.00 36.96 3.69
2211 4669 2.735772 TTGCAGAGGCTCCGGGATC 61.736 63.158 11.71 0.00 41.91 3.36
2212 4670 2.688666 TTGCAGAGGCTCCGGGAT 60.689 61.111 11.71 0.00 41.91 3.85
2213 4671 3.706373 GTTGCAGAGGCTCCGGGA 61.706 66.667 11.71 1.96 41.91 5.14
2214 4672 3.259633 AAGTTGCAGAGGCTCCGGG 62.260 63.158 11.71 2.26 41.91 5.73
2215 4673 2.037136 CAAGTTGCAGAGGCTCCGG 61.037 63.158 11.71 5.06 41.91 5.14
2216 4674 1.302033 ACAAGTTGCAGAGGCTCCG 60.302 57.895 11.71 1.11 41.91 4.63
2217 4675 0.536006 ACACAAGTTGCAGAGGCTCC 60.536 55.000 11.71 0.00 41.91 4.70
2218 4676 0.590195 CACACAAGTTGCAGAGGCTC 59.410 55.000 6.34 6.34 41.91 4.70
2219 4677 1.450531 GCACACAAGTTGCAGAGGCT 61.451 55.000 1.81 0.00 41.91 4.58
2220 4678 1.008079 GCACACAAGTTGCAGAGGC 60.008 57.895 1.81 2.73 41.68 4.70
2221 4679 1.280746 CGCACACAAGTTGCAGAGG 59.719 57.895 1.81 0.00 0.00 3.69
2222 4680 1.280746 CCGCACACAAGTTGCAGAG 59.719 57.895 1.81 0.00 0.00 3.35
2223 4681 2.186160 CCCGCACACAAGTTGCAGA 61.186 57.895 1.81 0.00 0.00 4.26
2224 4682 2.121564 CTCCCGCACACAAGTTGCAG 62.122 60.000 1.81 0.00 0.00 4.41
2225 4683 2.124529 TCCCGCACACAAGTTGCA 60.125 55.556 1.81 0.00 0.00 4.08
2226 4684 2.639286 CTCCCGCACACAAGTTGC 59.361 61.111 1.81 0.00 0.00 4.17
2227 4685 1.525995 ACCTCCCGCACACAAGTTG 60.526 57.895 0.00 0.00 0.00 3.16
2228 4686 1.525995 CACCTCCCGCACACAAGTT 60.526 57.895 0.00 0.00 0.00 2.66
2229 4687 2.111043 CACCTCCCGCACACAAGT 59.889 61.111 0.00 0.00 0.00 3.16
2230 4688 1.669115 CTCACCTCCCGCACACAAG 60.669 63.158 0.00 0.00 0.00 3.16
2231 4689 2.425592 CTCACCTCCCGCACACAA 59.574 61.111 0.00 0.00 0.00 3.33
2232 4690 3.625897 CCTCACCTCCCGCACACA 61.626 66.667 0.00 0.00 0.00 3.72
2233 4691 2.660064 ATCCTCACCTCCCGCACAC 61.660 63.158 0.00 0.00 0.00 3.82
2234 4692 2.284625 ATCCTCACCTCCCGCACA 60.285 61.111 0.00 0.00 0.00 4.57
2235 4693 2.187946 CATCCTCACCTCCCGCAC 59.812 66.667 0.00 0.00 0.00 5.34
2236 4694 3.785859 GCATCCTCACCTCCCGCA 61.786 66.667 0.00 0.00 0.00 5.69
2237 4695 4.899239 CGCATCCTCACCTCCCGC 62.899 72.222 0.00 0.00 0.00 6.13
2238 4696 4.899239 GCGCATCCTCACCTCCCG 62.899 72.222 0.30 0.00 0.00 5.14
2239 4697 4.554036 GGCGCATCCTCACCTCCC 62.554 72.222 10.83 0.00 0.00 4.30
2240 4698 3.746949 CTGGCGCATCCTCACCTCC 62.747 68.421 10.83 0.00 35.26 4.30
2241 4699 2.202987 CTGGCGCATCCTCACCTC 60.203 66.667 10.83 0.00 35.26 3.85
2242 4700 1.841302 TTTCTGGCGCATCCTCACCT 61.841 55.000 10.83 0.00 35.26 4.00
2243 4701 1.372087 CTTTCTGGCGCATCCTCACC 61.372 60.000 10.83 0.00 35.26 4.02
2244 4702 0.674895 ACTTTCTGGCGCATCCTCAC 60.675 55.000 10.83 0.00 35.26 3.51
2245 4703 0.036732 AACTTTCTGGCGCATCCTCA 59.963 50.000 10.83 0.00 35.26 3.86
2246 4704 0.729690 GAACTTTCTGGCGCATCCTC 59.270 55.000 10.83 0.00 35.26 3.71
2247 4705 0.678048 GGAACTTTCTGGCGCATCCT 60.678 55.000 10.83 0.00 35.26 3.24
2248 4706 1.657751 GGGAACTTTCTGGCGCATCC 61.658 60.000 10.83 3.05 0.00 3.51
2249 4707 0.678048 AGGGAACTTTCTGGCGCATC 60.678 55.000 10.83 0.00 37.44 3.91
2250 4708 1.380302 AGGGAACTTTCTGGCGCAT 59.620 52.632 10.83 0.00 37.44 4.73
2251 4709 2.836154 AGGGAACTTTCTGGCGCA 59.164 55.556 10.83 0.00 37.44 6.09
2262 4720 3.965347 TGTAGCCTGACCTATAAGGGAAC 59.035 47.826 0.00 0.00 40.58 3.62
2263 4721 4.274794 TGTAGCCTGACCTATAAGGGAA 57.725 45.455 0.00 0.00 40.58 3.97
2264 4722 3.985553 TGTAGCCTGACCTATAAGGGA 57.014 47.619 0.00 0.00 40.58 4.20
2265 4723 4.160329 TCATGTAGCCTGACCTATAAGGG 58.840 47.826 0.00 0.00 40.58 3.95
2266 4724 5.808366 TTCATGTAGCCTGACCTATAAGG 57.192 43.478 0.00 0.00 42.49 2.69
2267 4725 7.675062 AGATTTCATGTAGCCTGACCTATAAG 58.325 38.462 0.00 0.00 0.00 1.73
2268 4726 7.510685 AGAGATTTCATGTAGCCTGACCTATAA 59.489 37.037 0.00 0.00 0.00 0.98
2269 4727 7.013220 AGAGATTTCATGTAGCCTGACCTATA 58.987 38.462 0.00 0.00 0.00 1.31
2270 4728 5.843421 AGAGATTTCATGTAGCCTGACCTAT 59.157 40.000 0.00 0.00 0.00 2.57
2271 4729 5.211973 AGAGATTTCATGTAGCCTGACCTA 58.788 41.667 0.00 0.00 0.00 3.08
2272 4730 4.036518 AGAGATTTCATGTAGCCTGACCT 58.963 43.478 0.00 0.00 0.00 3.85
2273 4731 4.414337 AGAGATTTCATGTAGCCTGACC 57.586 45.455 0.00 0.00 0.00 4.02
2274 4732 6.648725 GGATAAGAGATTTCATGTAGCCTGAC 59.351 42.308 0.00 0.00 0.00 3.51
2275 4733 6.556495 AGGATAAGAGATTTCATGTAGCCTGA 59.444 38.462 0.00 0.00 28.29 3.86
2276 4734 6.767456 AGGATAAGAGATTTCATGTAGCCTG 58.233 40.000 0.00 0.00 28.29 4.85
2277 4735 6.556495 TGAGGATAAGAGATTTCATGTAGCCT 59.444 38.462 0.00 0.00 30.55 4.58
2278 4736 6.763355 TGAGGATAAGAGATTTCATGTAGCC 58.237 40.000 0.00 0.00 0.00 3.93
2279 4737 7.172361 GGTTGAGGATAAGAGATTTCATGTAGC 59.828 40.741 0.00 0.00 0.00 3.58
2280 4738 7.659390 GGGTTGAGGATAAGAGATTTCATGTAG 59.341 40.741 0.00 0.00 0.00 2.74
2281 4739 7.348274 AGGGTTGAGGATAAGAGATTTCATGTA 59.652 37.037 0.00 0.00 0.00 2.29
2282 4740 6.159398 AGGGTTGAGGATAAGAGATTTCATGT 59.841 38.462 0.00 0.00 0.00 3.21
2283 4741 6.599445 AGGGTTGAGGATAAGAGATTTCATG 58.401 40.000 0.00 0.00 0.00 3.07
2284 4742 6.183361 GGAGGGTTGAGGATAAGAGATTTCAT 60.183 42.308 0.00 0.00 0.00 2.57
2285 4743 5.131142 GGAGGGTTGAGGATAAGAGATTTCA 59.869 44.000 0.00 0.00 0.00 2.69
2286 4744 5.131142 TGGAGGGTTGAGGATAAGAGATTTC 59.869 44.000 0.00 0.00 0.00 2.17
2287 4745 5.039645 TGGAGGGTTGAGGATAAGAGATTT 58.960 41.667 0.00 0.00 0.00 2.17
2288 4746 4.635473 TGGAGGGTTGAGGATAAGAGATT 58.365 43.478 0.00 0.00 0.00 2.40
2289 4747 4.230455 CTGGAGGGTTGAGGATAAGAGAT 58.770 47.826 0.00 0.00 0.00 2.75
2290 4748 3.647636 CTGGAGGGTTGAGGATAAGAGA 58.352 50.000 0.00 0.00 0.00 3.10
2291 4749 2.103941 GCTGGAGGGTTGAGGATAAGAG 59.896 54.545 0.00 0.00 0.00 2.85
2292 4750 2.119495 GCTGGAGGGTTGAGGATAAGA 58.881 52.381 0.00 0.00 0.00 2.10
2293 4751 1.141858 GGCTGGAGGGTTGAGGATAAG 59.858 57.143 0.00 0.00 0.00 1.73
2294 4752 1.213296 GGCTGGAGGGTTGAGGATAA 58.787 55.000 0.00 0.00 0.00 1.75
2295 4753 0.343372 AGGCTGGAGGGTTGAGGATA 59.657 55.000 0.00 0.00 0.00 2.59
2296 4754 0.551131 AAGGCTGGAGGGTTGAGGAT 60.551 55.000 0.00 0.00 0.00 3.24
2297 4755 0.118346 TAAGGCTGGAGGGTTGAGGA 59.882 55.000 0.00 0.00 0.00 3.71
2298 4756 0.253327 GTAAGGCTGGAGGGTTGAGG 59.747 60.000 0.00 0.00 0.00 3.86
2299 4757 1.280457 AGTAAGGCTGGAGGGTTGAG 58.720 55.000 0.00 0.00 0.00 3.02
2300 4758 1.742308 AAGTAAGGCTGGAGGGTTGA 58.258 50.000 0.00 0.00 0.00 3.18
2301 4759 2.162681 CAAAGTAAGGCTGGAGGGTTG 58.837 52.381 0.00 0.00 0.00 3.77
2302 4760 2.040412 CTCAAAGTAAGGCTGGAGGGTT 59.960 50.000 0.00 0.00 0.00 4.11
2303 4761 1.630878 CTCAAAGTAAGGCTGGAGGGT 59.369 52.381 0.00 0.00 0.00 4.34
2304 4762 1.909302 TCTCAAAGTAAGGCTGGAGGG 59.091 52.381 0.00 0.00 33.06 4.30
2305 4763 3.922171 ATCTCAAAGTAAGGCTGGAGG 57.078 47.619 0.00 0.00 33.06 4.30
2306 4764 5.006386 ACAAATCTCAAAGTAAGGCTGGAG 58.994 41.667 0.00 0.00 33.33 3.86
2307 4765 4.985538 ACAAATCTCAAAGTAAGGCTGGA 58.014 39.130 0.00 0.00 0.00 3.86
2308 4766 7.337942 AGAATACAAATCTCAAAGTAAGGCTGG 59.662 37.037 0.00 0.00 0.00 4.85
2309 4767 8.273780 AGAATACAAATCTCAAAGTAAGGCTG 57.726 34.615 0.00 0.00 0.00 4.85
2310 4768 7.554476 GGAGAATACAAATCTCAAAGTAAGGCT 59.446 37.037 5.96 0.00 44.13 4.58
2311 4769 7.336931 TGGAGAATACAAATCTCAAAGTAAGGC 59.663 37.037 5.96 0.00 44.13 4.35
2312 4770 8.792830 TGGAGAATACAAATCTCAAAGTAAGG 57.207 34.615 5.96 0.00 44.13 2.69
2314 4772 9.793259 AGTTGGAGAATACAAATCTCAAAGTAA 57.207 29.630 5.96 0.00 44.13 2.24
2316 4774 9.793259 TTAGTTGGAGAATACAAATCTCAAAGT 57.207 29.630 5.96 6.16 44.13 2.66
2318 4776 9.793259 AGTTAGTTGGAGAATACAAATCTCAAA 57.207 29.630 5.96 0.00 44.13 2.69
2319 4777 9.793259 AAGTTAGTTGGAGAATACAAATCTCAA 57.207 29.630 5.96 0.00 44.13 3.02
2325 4783 9.616156 TGTTGTAAGTTAGTTGGAGAATACAAA 57.384 29.630 0.00 0.00 34.81 2.83
2326 4784 9.616156 TTGTTGTAAGTTAGTTGGAGAATACAA 57.384 29.630 0.00 0.00 31.66 2.41
2327 4785 9.268268 CTTGTTGTAAGTTAGTTGGAGAATACA 57.732 33.333 0.00 0.00 0.00 2.29
2328 4786 8.228464 GCTTGTTGTAAGTTAGTTGGAGAATAC 58.772 37.037 0.00 0.00 0.00 1.89
2329 4787 7.934665 TGCTTGTTGTAAGTTAGTTGGAGAATA 59.065 33.333 0.00 0.00 0.00 1.75
2330 4788 6.770785 TGCTTGTTGTAAGTTAGTTGGAGAAT 59.229 34.615 0.00 0.00 0.00 2.40
2331 4789 6.116806 TGCTTGTTGTAAGTTAGTTGGAGAA 58.883 36.000 0.00 0.00 0.00 2.87
2332 4790 5.676552 TGCTTGTTGTAAGTTAGTTGGAGA 58.323 37.500 0.00 0.00 0.00 3.71
2333 4791 5.758296 TCTGCTTGTTGTAAGTTAGTTGGAG 59.242 40.000 0.00 0.00 0.00 3.86
2334 4792 5.676552 TCTGCTTGTTGTAAGTTAGTTGGA 58.323 37.500 0.00 0.00 0.00 3.53
2335 4793 6.560253 ATCTGCTTGTTGTAAGTTAGTTGG 57.440 37.500 0.00 0.00 0.00 3.77
2336 4794 8.345565 AGAAATCTGCTTGTTGTAAGTTAGTTG 58.654 33.333 0.00 0.00 0.00 3.16
2337 4795 8.451908 AGAAATCTGCTTGTTGTAAGTTAGTT 57.548 30.769 0.00 0.00 0.00 2.24
2338 4796 7.934120 AGAGAAATCTGCTTGTTGTAAGTTAGT 59.066 33.333 0.00 0.00 0.00 2.24
2339 4797 8.316640 AGAGAAATCTGCTTGTTGTAAGTTAG 57.683 34.615 0.00 0.00 0.00 2.34
2340 4798 8.677148 AAGAGAAATCTGCTTGTTGTAAGTTA 57.323 30.769 0.00 0.00 0.00 2.24
2341 4799 7.573968 AAGAGAAATCTGCTTGTTGTAAGTT 57.426 32.000 0.00 0.00 0.00 2.66
2342 4800 7.573968 AAAGAGAAATCTGCTTGTTGTAAGT 57.426 32.000 0.00 0.00 0.00 2.24
2343 4801 8.862550 AAAAAGAGAAATCTGCTTGTTGTAAG 57.137 30.769 0.00 0.00 0.00 2.34
2344 4802 8.465999 TGAAAAAGAGAAATCTGCTTGTTGTAA 58.534 29.630 0.00 0.00 0.00 2.41
2345 4803 7.995289 TGAAAAAGAGAAATCTGCTTGTTGTA 58.005 30.769 0.00 0.00 0.00 2.41
2346 4804 6.866480 TGAAAAAGAGAAATCTGCTTGTTGT 58.134 32.000 0.00 0.00 0.00 3.32
2347 4805 6.420008 CCTGAAAAAGAGAAATCTGCTTGTTG 59.580 38.462 0.00 0.00 0.00 3.33
2348 4806 6.462067 CCCTGAAAAAGAGAAATCTGCTTGTT 60.462 38.462 0.00 0.00 0.00 2.83
2349 4807 5.010415 CCCTGAAAAAGAGAAATCTGCTTGT 59.990 40.000 0.00 0.00 0.00 3.16
2350 4808 5.242393 TCCCTGAAAAAGAGAAATCTGCTTG 59.758 40.000 0.00 0.00 0.00 4.01
2351 4809 5.242615 GTCCCTGAAAAAGAGAAATCTGCTT 59.757 40.000 0.00 0.00 0.00 3.91
2352 4810 4.764308 GTCCCTGAAAAAGAGAAATCTGCT 59.236 41.667 0.00 0.00 0.00 4.24
2353 4811 4.378874 CGTCCCTGAAAAAGAGAAATCTGC 60.379 45.833 0.00 0.00 0.00 4.26
2354 4812 4.997395 TCGTCCCTGAAAAAGAGAAATCTG 59.003 41.667 0.00 0.00 0.00 2.90
2355 4813 5.228945 TCGTCCCTGAAAAAGAGAAATCT 57.771 39.130 0.00 0.00 0.00 2.40
2356 4814 5.643777 TCATCGTCCCTGAAAAAGAGAAATC 59.356 40.000 0.00 0.00 0.00 2.17
2357 4815 5.560724 TCATCGTCCCTGAAAAAGAGAAAT 58.439 37.500 0.00 0.00 0.00 2.17
2358 4816 4.968259 TCATCGTCCCTGAAAAAGAGAAA 58.032 39.130 0.00 0.00 0.00 2.52
2359 4817 4.040461 ACTCATCGTCCCTGAAAAAGAGAA 59.960 41.667 0.00 0.00 0.00 2.87
2360 4818 3.578716 ACTCATCGTCCCTGAAAAAGAGA 59.421 43.478 0.00 0.00 0.00 3.10
2361 4819 3.931578 ACTCATCGTCCCTGAAAAAGAG 58.068 45.455 0.00 0.00 0.00 2.85
2362 4820 4.351874 AACTCATCGTCCCTGAAAAAGA 57.648 40.909 0.00 0.00 0.00 2.52
2363 4821 4.515191 TCAAACTCATCGTCCCTGAAAAAG 59.485 41.667 0.00 0.00 0.00 2.27
2364 4822 4.456535 TCAAACTCATCGTCCCTGAAAAA 58.543 39.130 0.00 0.00 0.00 1.94
2365 4823 4.065088 CTCAAACTCATCGTCCCTGAAAA 58.935 43.478 0.00 0.00 0.00 2.29
2366 4824 3.323691 TCTCAAACTCATCGTCCCTGAAA 59.676 43.478 0.00 0.00 0.00 2.69
2367 4825 2.897326 TCTCAAACTCATCGTCCCTGAA 59.103 45.455 0.00 0.00 0.00 3.02
2368 4826 2.493675 CTCTCAAACTCATCGTCCCTGA 59.506 50.000 0.00 0.00 0.00 3.86
2369 4827 2.417924 CCTCTCAAACTCATCGTCCCTG 60.418 54.545 0.00 0.00 0.00 4.45
2370 4828 1.827969 CCTCTCAAACTCATCGTCCCT 59.172 52.381 0.00 0.00 0.00 4.20
2371 4829 1.134670 CCCTCTCAAACTCATCGTCCC 60.135 57.143 0.00 0.00 0.00 4.46
2372 4830 1.825474 TCCCTCTCAAACTCATCGTCC 59.175 52.381 0.00 0.00 0.00 4.79
2373 4831 2.755655 TCTCCCTCTCAAACTCATCGTC 59.244 50.000 0.00 0.00 0.00 4.20
2374 4832 2.757868 CTCTCCCTCTCAAACTCATCGT 59.242 50.000 0.00 0.00 0.00 3.73
2375 4833 2.100584 CCTCTCCCTCTCAAACTCATCG 59.899 54.545 0.00 0.00 0.00 3.84
2376 4834 2.433970 CCCTCTCCCTCTCAAACTCATC 59.566 54.545 0.00 0.00 0.00 2.92
2377 4835 2.225753 ACCCTCTCCCTCTCAAACTCAT 60.226 50.000 0.00 0.00 0.00 2.90
2378 4836 1.150135 ACCCTCTCCCTCTCAAACTCA 59.850 52.381 0.00 0.00 0.00 3.41
2379 4837 1.552792 CACCCTCTCCCTCTCAAACTC 59.447 57.143 0.00 0.00 0.00 3.01
2380 4838 1.132689 ACACCCTCTCCCTCTCAAACT 60.133 52.381 0.00 0.00 0.00 2.66
2381 4839 1.276705 GACACCCTCTCCCTCTCAAAC 59.723 57.143 0.00 0.00 0.00 2.93
2382 4840 1.645710 GACACCCTCTCCCTCTCAAA 58.354 55.000 0.00 0.00 0.00 2.69
2383 4841 0.612174 CGACACCCTCTCCCTCTCAA 60.612 60.000 0.00 0.00 0.00 3.02
2393 4851 2.126031 GAAGACGGCGACACCCTC 60.126 66.667 16.62 0.00 33.26 4.30
2394 4852 2.600769 AGAAGACGGCGACACCCT 60.601 61.111 16.62 2.96 33.26 4.34
2403 4861 3.470888 ATGGGGCGGAGAAGACGG 61.471 66.667 0.00 0.00 0.00 4.79
2404 4862 2.202932 CATGGGGCGGAGAAGACG 60.203 66.667 0.00 0.00 0.00 4.18
2406 4864 2.285368 ACCATGGGGCGGAGAAGA 60.285 61.111 18.09 0.00 37.90 2.87
2407 4865 2.124570 CACCATGGGGCGGAGAAG 60.125 66.667 18.09 0.00 37.90 2.85
2408 4866 3.727258 CCACCATGGGGCGGAGAA 61.727 66.667 18.09 0.00 38.80 2.87
2415 4873 1.570857 TAGGTTGAGCCACCATGGGG 61.571 60.000 18.09 13.08 39.62 4.96
2416 4874 0.107017 CTAGGTTGAGCCACCATGGG 60.107 60.000 18.09 4.89 39.62 4.00
2417 4875 0.749454 GCTAGGTTGAGCCACCATGG 60.749 60.000 11.19 11.19 39.62 3.66
2418 4876 0.035152 TGCTAGGTTGAGCCACCATG 60.035 55.000 0.00 0.00 42.11 3.66
2420 4878 1.679311 CTGCTAGGTTGAGCCACCA 59.321 57.895 0.00 0.00 42.11 4.17
2421 4879 1.746991 GCTGCTAGGTTGAGCCACC 60.747 63.158 0.00 0.00 42.11 4.61
2422 4880 1.003355 TGCTGCTAGGTTGAGCCAC 60.003 57.895 0.00 0.00 42.11 5.01
2424 4882 2.103042 CGTGCTGCTAGGTTGAGCC 61.103 63.158 0.00 0.00 42.11 4.70
2425 4883 2.103042 CCGTGCTGCTAGGTTGAGC 61.103 63.158 0.00 0.00 43.16 4.26
2426 4884 2.103042 GCCGTGCTGCTAGGTTGAG 61.103 63.158 13.65 0.00 0.00 3.02
2427 4885 2.047274 GCCGTGCTGCTAGGTTGA 60.047 61.111 13.65 0.00 0.00 3.18
2428 4886 3.127533 GGCCGTGCTGCTAGGTTG 61.128 66.667 13.65 0.00 0.00 3.77
2429 4887 2.895424 AAGGCCGTGCTGCTAGGTT 61.895 57.895 13.65 1.36 0.00 3.50
2430 4888 3.322466 AAGGCCGTGCTGCTAGGT 61.322 61.111 13.65 0.00 0.00 3.08
2431 4889 2.821366 CAAGGCCGTGCTGCTAGG 60.821 66.667 5.51 5.38 0.00 3.02
2432 4890 2.046892 ACAAGGCCGTGCTGCTAG 60.047 61.111 19.37 0.00 0.00 3.42
2433 4891 2.047274 GACAAGGCCGTGCTGCTA 60.047 61.111 19.37 0.00 0.00 3.49
2435 4893 3.058160 ATGACAAGGCCGTGCTGC 61.058 61.111 19.37 9.06 0.00 5.25
2436 4894 1.915614 GACATGACAAGGCCGTGCTG 61.916 60.000 19.37 15.41 0.00 4.41
2437 4895 1.672356 GACATGACAAGGCCGTGCT 60.672 57.895 19.37 6.03 0.00 4.40
2438 4896 2.870372 GACATGACAAGGCCGTGC 59.130 61.111 19.37 11.92 0.00 5.34
2440 4898 2.047274 CCGACATGACAAGGCCGT 60.047 61.111 0.00 0.00 0.00 5.68
2441 4899 2.047274 ACCGACATGACAAGGCCG 60.047 61.111 0.00 0.00 0.00 6.13
2442 4900 2.100631 CGACCGACATGACAAGGCC 61.101 63.158 0.00 0.00 0.00 5.19
2443 4901 2.740714 GCGACCGACATGACAAGGC 61.741 63.158 0.00 0.00 0.00 4.35
2444 4902 0.172578 TAGCGACCGACATGACAAGG 59.827 55.000 0.00 0.00 0.00 3.61
2445 4903 1.990799 TTAGCGACCGACATGACAAG 58.009 50.000 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.