Multiple sequence alignment - TraesCS7D01G453200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G453200 chr7D 100.000 1952 0 0 1 1952 572800031 572801982 0.000000e+00 3605.0
1 TraesCS7D01G453200 chr7D 100.000 157 0 0 2135 2291 572802165 572802321 8.010000e-75 291.0
2 TraesCS7D01G453200 chr7D 94.479 163 3 1 2135 2291 572806547 572806709 1.760000e-61 246.0
3 TraesCS7D01G453200 chr7D 93.865 163 4 1 2135 2291 435821653 435821815 8.180000e-60 241.0
4 TraesCS7D01G453200 chr7B 93.179 777 35 7 853 1619 630501986 630502754 0.000000e+00 1125.0
5 TraesCS7D01G453200 chr7B 84.120 932 90 26 3 888 630429442 630430361 0.000000e+00 848.0
6 TraesCS7D01G453200 chr7B 86.900 229 30 0 1064 1292 630196249 630196477 8.120000e-65 257.0
7 TraesCS7D01G453200 chr7B 80.528 303 52 4 978 1277 630583900 630584198 2.290000e-55 226.0
8 TraesCS7D01G453200 chr7B 90.625 64 4 2 1549 1611 630430370 630430432 1.460000e-12 84.2
9 TraesCS7D01G453200 chr2D 83.439 471 69 4 9 474 542198230 542197764 1.630000e-116 429.0
10 TraesCS7D01G453200 chr2D 94.479 163 3 1 2135 2291 146949036 146948874 1.760000e-61 246.0
11 TraesCS7D01G453200 chr2D 89.565 115 9 2 1719 1832 9791922 9792034 2.370000e-30 143.0
12 TraesCS7D01G453200 chr4D 83.015 471 72 4 10 476 319084046 319083580 9.790000e-114 420.0
13 TraesCS7D01G453200 chr4D 93.865 163 4 1 2135 2291 463001183 463001021 8.180000e-60 241.0
14 TraesCS7D01G453200 chr4D 93.865 163 4 1 2135 2291 463016808 463016646 8.180000e-60 241.0
15 TraesCS7D01G453200 chr4D 83.562 73 10 2 1762 1833 301349319 301349390 1.470000e-07 67.6
16 TraesCS7D01G453200 chr1D 82.590 471 70 7 9 474 404971857 404971394 2.740000e-109 405.0
17 TraesCS7D01G453200 chr1D 81.884 138 14 5 558 686 44977106 44977241 3.110000e-19 106.0
18 TraesCS7D01G453200 chr1D 82.576 132 12 5 564 686 45095539 45095668 3.110000e-19 106.0
19 TraesCS7D01G453200 chr1D 82.443 131 13 4 564 686 45133126 45133254 3.110000e-19 106.0
20 TraesCS7D01G453200 chr1D 81.197 117 17 3 571 686 208275058 208274946 3.130000e-14 89.8
21 TraesCS7D01G453200 chr3D 81.551 477 66 16 11 475 49450086 49449620 7.730000e-100 374.0
22 TraesCS7D01G453200 chr3D 80.290 482 81 9 3 475 95500553 95501029 3.620000e-93 351.0
23 TraesCS7D01G453200 chr3D 92.638 163 6 3 2135 2291 219461008 219460846 1.770000e-56 230.0
24 TraesCS7D01G453200 chr3D 81.818 110 14 2 583 686 433319654 433319763 1.130000e-13 87.9
25 TraesCS7D01G453200 chr3B 80.625 480 83 5 3 475 644145909 644146385 1.670000e-96 363.0
26 TraesCS7D01G453200 chr2B 82.110 436 65 7 39 467 152846059 152846488 6.020000e-96 361.0
27 TraesCS7D01G453200 chr2B 80.457 481 82 7 3 475 655521445 655521921 7.780000e-95 357.0
28 TraesCS7D01G453200 chr6D 93.865 163 4 1 2135 2291 285260856 285261018 8.180000e-60 241.0
29 TraesCS7D01G453200 chr6D 93.865 163 4 1 2135 2291 451724838 451725000 8.180000e-60 241.0
30 TraesCS7D01G453200 chr6D 80.292 137 19 5 558 686 80600125 80600261 1.870000e-16 97.1
31 TraesCS7D01G453200 chrUn 93.827 162 4 1 2135 2290 476686501 476686662 2.940000e-59 239.0
32 TraesCS7D01G453200 chrUn 91.489 47 1 2 711 754 108799764 108799810 6.830000e-06 62.1
33 TraesCS7D01G453200 chr7A 80.000 245 28 13 1033 1277 662097108 662097331 6.550000e-36 161.0
34 TraesCS7D01G453200 chr5D 81.955 133 16 3 558 683 61793589 61793720 3.110000e-19 106.0
35 TraesCS7D01G453200 chr1A 88.462 78 6 3 1759 1833 427540942 427540865 8.720000e-15 91.6
36 TraesCS7D01G453200 chr4A 87.671 73 8 1 1762 1833 88779899 88779827 1.460000e-12 84.2
37 TraesCS7D01G453200 chr3A 92.982 57 4 0 630 686 61431335 61431279 1.460000e-12 84.2
38 TraesCS7D01G453200 chr6A 94.118 51 3 0 1783 1833 435598637 435598687 6.790000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G453200 chr7D 572800031 572802321 2290 False 1948.0 3605 100.0000 1 2291 2 chr7D.!!$F3 2290
1 TraesCS7D01G453200 chr7B 630501986 630502754 768 False 1125.0 1125 93.1790 853 1619 1 chr7B.!!$F2 766
2 TraesCS7D01G453200 chr7B 630429442 630430432 990 False 466.1 848 87.3725 3 1611 2 chr7B.!!$F4 1608

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
814 855 0.179067 TCGCCACCGAGAACAAAAGT 60.179 50.0 0.0 0.0 38.82 2.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1864 1920 0.032813 AGGGATGCATGTCCAAAGGG 60.033 55.0 2.46 0.0 40.17 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 4.393155 TGCCGCTGTCATCGCCTT 62.393 61.111 0.00 0.00 0.00 4.35
39 40 3.093278 CCGCTGTCATCGCCTTTC 58.907 61.111 0.00 0.00 0.00 2.62
52 53 1.893919 GCCTTTCCCTCGTCAGAGCT 61.894 60.000 0.00 0.00 43.05 4.09
54 55 0.739112 CTTTCCCTCGTCAGAGCTGC 60.739 60.000 0.00 0.00 43.05 5.25
70 71 1.715519 GCTGCGCAAAACATGTTGTAG 59.284 47.619 13.05 9.39 0.00 2.74
71 72 2.858260 GCTGCGCAAAACATGTTGTAGT 60.858 45.455 13.05 0.00 0.00 2.73
72 73 3.608241 GCTGCGCAAAACATGTTGTAGTA 60.608 43.478 13.05 3.14 0.00 1.82
82 83 6.650427 AACATGTTGTAGTAGACAGTCAGA 57.350 37.500 11.07 0.00 39.88 3.27
85 86 7.671302 ACATGTTGTAGTAGACAGTCAGAAAT 58.329 34.615 2.66 0.00 39.88 2.17
87 88 8.651588 CATGTTGTAGTAGACAGTCAGAAATTC 58.348 37.037 2.66 0.00 39.88 2.17
91 92 4.724303 AGTAGACAGTCAGAAATTCGTCG 58.276 43.478 2.66 0.00 0.00 5.12
92 93 2.329379 AGACAGTCAGAAATTCGTCGC 58.671 47.619 2.66 0.00 0.00 5.19
108 109 1.525077 CGCGCTAAGGCCCCATAAA 60.525 57.895 5.56 0.00 34.44 1.40
111 112 1.757682 CGCTAAGGCCCCATAAAACA 58.242 50.000 0.00 0.00 34.44 2.83
115 116 3.674955 GCTAAGGCCCCATAAAACAAACG 60.675 47.826 0.00 0.00 0.00 3.60
119 120 1.269831 GCCCCATAAAACAAACGCACA 60.270 47.619 0.00 0.00 0.00 4.57
193 194 7.129109 ACCTAAAAACACATGAACATAGACG 57.871 36.000 0.00 0.00 0.00 4.18
194 195 6.932400 ACCTAAAAACACATGAACATAGACGA 59.068 34.615 0.00 0.00 0.00 4.20
196 197 7.744715 CCTAAAAACACATGAACATAGACGAAC 59.255 37.037 0.00 0.00 0.00 3.95
197 198 6.612247 AAAACACATGAACATAGACGAACA 57.388 33.333 0.00 0.00 0.00 3.18
200 201 4.451096 ACACATGAACATAGACGAACAACC 59.549 41.667 0.00 0.00 0.00 3.77
202 203 4.451096 ACATGAACATAGACGAACAACCAC 59.549 41.667 0.00 0.00 0.00 4.16
203 204 3.395639 TGAACATAGACGAACAACCACC 58.604 45.455 0.00 0.00 0.00 4.61
212 213 1.726853 GAACAACCACCAGATCCGAG 58.273 55.000 0.00 0.00 0.00 4.63
213 214 1.002087 GAACAACCACCAGATCCGAGT 59.998 52.381 0.00 0.00 0.00 4.18
230 231 5.175859 TCCGAGTAAATCCATCAAAGACAC 58.824 41.667 0.00 0.00 0.00 3.67
233 234 6.761242 CCGAGTAAATCCATCAAAGACACATA 59.239 38.462 0.00 0.00 0.00 2.29
234 235 7.442364 CCGAGTAAATCCATCAAAGACACATAT 59.558 37.037 0.00 0.00 0.00 1.78
235 236 8.491152 CGAGTAAATCCATCAAAGACACATATC 58.509 37.037 0.00 0.00 0.00 1.63
236 237 8.682936 AGTAAATCCATCAAAGACACATATCC 57.317 34.615 0.00 0.00 0.00 2.59
257 258 1.491670 CAGAGACACACCTCAACACG 58.508 55.000 0.00 0.00 35.68 4.49
274 275 2.279517 GCCCACCGACGATGCTAG 60.280 66.667 0.00 0.00 0.00 3.42
278 279 1.428219 CACCGACGATGCTAGACGT 59.572 57.895 9.14 9.14 45.32 4.34
279 280 0.179171 CACCGACGATGCTAGACGTT 60.179 55.000 0.00 0.00 42.74 3.99
284 290 1.918609 GACGATGCTAGACGTTGGAAC 59.081 52.381 10.33 0.00 42.74 3.62
293 299 2.537143 AGACGTTGGAACAGGGACTAT 58.463 47.619 0.00 0.00 42.39 2.12
296 302 1.338674 CGTTGGAACAGGGACTATGCA 60.339 52.381 0.00 0.00 42.39 3.96
304 310 0.339859 AGGGACTATGCAGGGAGACA 59.660 55.000 0.00 0.00 36.02 3.41
318 324 5.240403 GCAGGGAGACATTTATTCCATCTTC 59.760 44.000 0.00 0.00 32.50 2.87
330 336 1.078918 CATCTTCAGTGAGCCGCCA 60.079 57.895 0.00 0.00 0.00 5.69
331 337 1.078848 ATCTTCAGTGAGCCGCCAC 60.079 57.895 0.00 4.36 37.32 5.01
335 341 4.988598 CAGTGAGCCGCCACCGTT 62.989 66.667 7.99 0.00 37.76 4.44
346 352 2.325082 CCACCGTTTCGCCTTCCTG 61.325 63.158 0.00 0.00 0.00 3.86
348 354 1.004918 ACCGTTTCGCCTTCCTGAG 60.005 57.895 0.00 0.00 0.00 3.35
358 364 1.815408 GCCTTCCTGAGCAGAACACAA 60.815 52.381 0.00 0.00 0.00 3.33
366 372 3.211045 TGAGCAGAACACAAACCCTAAC 58.789 45.455 0.00 0.00 0.00 2.34
381 387 6.954487 AACCCTAACAAAACTCGAGAAAAT 57.046 33.333 21.68 2.53 0.00 1.82
406 412 4.974438 AACGGAGCCCTCCCACCA 62.974 66.667 8.68 0.00 46.96 4.17
414 420 2.352805 CCTCCCACCAGCAAGGAC 59.647 66.667 1.83 0.00 41.22 3.85
441 447 4.247380 CTCCGCTCCCATGGCTCC 62.247 72.222 6.09 0.00 0.00 4.70
467 473 3.744719 CGAAGACGAGGCGGACCA 61.745 66.667 0.00 0.00 42.66 4.02
469 475 3.991536 GAAGACGAGGCGGACCAGC 62.992 68.421 0.00 0.00 39.06 4.85
512 518 1.072159 GTGTGGGCTGCTTCAGTCT 59.928 57.895 0.00 0.00 36.22 3.24
539 545 1.096416 AAAACGACTGGCACGGAAAA 58.904 45.000 2.51 0.00 38.67 2.29
553 559 4.380867 GCACGGAAAATGATTTCAGGTGAT 60.381 41.667 19.72 0.00 45.10 3.06
573 579 4.094739 TGATTGATTCCACAATGTAGTGCG 59.905 41.667 0.00 0.00 40.03 5.34
577 583 5.182487 TGATTCCACAATGTAGTGCGTATT 58.818 37.500 0.00 0.00 38.18 1.89
581 587 6.838198 TCCACAATGTAGTGCGTATTAATC 57.162 37.500 0.00 0.00 38.18 1.75
583 589 7.045416 TCCACAATGTAGTGCGTATTAATCTT 58.955 34.615 0.00 0.00 38.18 2.40
611 617 7.614124 AAAGTCAAACTTTGCAAACATTGAT 57.386 28.000 25.74 15.21 45.83 2.57
622 628 8.484641 TTTGCAAACATTGATCAAGTTTACAA 57.515 26.923 25.54 25.54 36.97 2.41
624 630 6.478344 TGCAAACATTGATCAAGTTTACAACC 59.522 34.615 23.53 15.11 34.03 3.77
627 633 9.044150 CAAACATTGATCAAGTTTACAACCAAT 57.956 29.630 23.53 7.38 34.03 3.16
726 767 9.126151 TGACATGATAAAAGTTTGTGAGGTTTA 57.874 29.630 0.00 0.00 0.00 2.01
728 769 9.744468 ACATGATAAAAGTTTGTGAGGTTTAAC 57.256 29.630 0.00 0.00 0.00 2.01
770 811 8.862325 ATACACTATGTTATGGAGAGAGAGAG 57.138 38.462 0.00 0.00 0.00 3.20
771 812 6.905736 ACACTATGTTATGGAGAGAGAGAGA 58.094 40.000 0.00 0.00 0.00 3.10
772 813 6.998074 ACACTATGTTATGGAGAGAGAGAGAG 59.002 42.308 0.00 0.00 0.00 3.20
773 814 7.147391 ACACTATGTTATGGAGAGAGAGAGAGA 60.147 40.741 0.00 0.00 0.00 3.10
777 818 5.665360 TGTTATGGAGAGAGAGAGAGAGAGA 59.335 44.000 0.00 0.00 0.00 3.10
802 843 2.406596 TATGTTAAAGGGTCGCCACC 57.593 50.000 0.00 0.00 42.90 4.61
803 844 0.675522 ATGTTAAAGGGTCGCCACCG 60.676 55.000 0.00 0.00 44.91 4.94
813 854 0.234884 GTCGCCACCGAGAACAAAAG 59.765 55.000 0.00 0.00 45.38 2.27
814 855 0.179067 TCGCCACCGAGAACAAAAGT 60.179 50.000 0.00 0.00 38.82 2.66
815 856 0.234884 CGCCACCGAGAACAAAAGTC 59.765 55.000 0.00 0.00 36.29 3.01
818 863 2.540973 GCCACCGAGAACAAAAGTCAAC 60.541 50.000 0.00 0.00 0.00 3.18
831 876 5.755861 ACAAAAGTCAACTAGAGCTTCTGAC 59.244 40.000 0.00 0.00 37.30 3.51
991 1036 1.289380 GTCGATCCATAGGCGACCC 59.711 63.158 0.00 0.00 46.15 4.46
993 1038 1.179174 TCGATCCATAGGCGACCCAG 61.179 60.000 0.00 0.00 0.00 4.45
994 1039 1.004440 GATCCATAGGCGACCCAGC 60.004 63.158 0.00 0.00 0.00 4.85
995 1040 2.771763 GATCCATAGGCGACCCAGCG 62.772 65.000 0.00 0.00 38.18 5.18
1021 1066 1.521681 GCCTACGAAGCTCGGCATT 60.522 57.895 9.75 0.00 45.59 3.56
1182 1230 2.125350 CTCCTGCTCCTTGGCGTC 60.125 66.667 0.00 0.00 34.52 5.19
1186 1234 2.604686 TGCTCCTTGGCGTCCTCT 60.605 61.111 0.00 0.00 34.52 3.69
1273 1321 1.122019 AGCCGTCTTGAACCACCTCT 61.122 55.000 0.00 0.00 0.00 3.69
1303 1351 2.796593 GCAAACTAGCAAGCAACCTTTG 59.203 45.455 0.00 0.00 0.00 2.77
1306 1354 1.144913 ACTAGCAAGCAACCTTTGGGA 59.855 47.619 0.00 0.00 36.25 4.37
1323 1371 1.064946 GACCTCGGAGATGCGTCAG 59.935 63.158 8.99 0.00 33.89 3.51
1332 1380 2.263077 GAGATGCGTCAGTGTTAGTGG 58.737 52.381 8.99 0.00 0.00 4.00
1352 1400 6.223852 AGTGGCGATCAATAGTACAATAAGG 58.776 40.000 0.00 0.00 0.00 2.69
1388 1436 4.523558 AGTCACTGTTAGTCTGTTACCCTC 59.476 45.833 0.00 0.00 0.00 4.30
1389 1437 4.523558 GTCACTGTTAGTCTGTTACCCTCT 59.476 45.833 0.00 0.00 0.00 3.69
1390 1438 5.010820 GTCACTGTTAGTCTGTTACCCTCTT 59.989 44.000 0.00 0.00 0.00 2.85
1424 1472 0.802222 CGTGTCCGTGAGCATCGATT 60.802 55.000 0.00 0.00 38.61 3.34
1425 1473 1.359848 GTGTCCGTGAGCATCGATTT 58.640 50.000 0.00 0.00 38.61 2.17
1434 1487 6.019075 TCCGTGAGCATCGATTTAATGTTTAG 60.019 38.462 0.00 0.00 38.61 1.85
1438 1491 8.175069 GTGAGCATCGATTTAATGTTTAGTTGA 58.825 33.333 0.00 0.00 38.61 3.18
1483 1536 4.889409 CCTACCATTTCCATGTGCTTGTAT 59.111 41.667 0.00 0.00 0.00 2.29
1593 1646 8.324306 TCTGATGATTATTAGTGGATGATTCCC 58.676 37.037 0.00 0.00 41.83 3.97
1602 1656 0.380733 GGATGATTCCCGCCGAAAAC 59.619 55.000 0.00 0.00 35.84 2.43
1614 1670 3.303791 CCGCCGAAAACATATTAGGCTTC 60.304 47.826 9.03 0.00 45.57 3.86
1619 1675 6.198966 GCCGAAAACATATTAGGCTTCATTTG 59.801 38.462 0.00 0.00 44.70 2.32
1620 1676 6.697019 CCGAAAACATATTAGGCTTCATTTGG 59.303 38.462 0.00 0.00 0.00 3.28
1621 1677 7.257722 CGAAAACATATTAGGCTTCATTTGGT 58.742 34.615 0.00 0.00 0.00 3.67
1622 1678 7.759433 CGAAAACATATTAGGCTTCATTTGGTT 59.241 33.333 0.00 0.00 0.00 3.67
1623 1679 8.776376 AAAACATATTAGGCTTCATTTGGTTG 57.224 30.769 0.00 0.00 0.00 3.77
1624 1680 5.906073 ACATATTAGGCTTCATTTGGTTGC 58.094 37.500 0.00 0.00 0.00 4.17
1625 1681 5.421693 ACATATTAGGCTTCATTTGGTTGCA 59.578 36.000 0.00 0.00 0.00 4.08
1626 1682 3.940209 TTAGGCTTCATTTGGTTGCAG 57.060 42.857 0.00 0.00 0.00 4.41
1627 1683 0.971386 AGGCTTCATTTGGTTGCAGG 59.029 50.000 0.00 0.00 0.00 4.85
1628 1684 0.037046 GGCTTCATTTGGTTGCAGGG 60.037 55.000 0.00 0.00 0.00 4.45
1629 1685 0.037046 GCTTCATTTGGTTGCAGGGG 60.037 55.000 0.00 0.00 0.00 4.79
1630 1686 1.631405 CTTCATTTGGTTGCAGGGGA 58.369 50.000 0.00 0.00 0.00 4.81
1631 1687 1.547372 CTTCATTTGGTTGCAGGGGAG 59.453 52.381 0.00 0.00 0.00 4.30
1632 1688 0.776810 TCATTTGGTTGCAGGGGAGA 59.223 50.000 0.00 0.00 0.00 3.71
1633 1689 1.358787 TCATTTGGTTGCAGGGGAGAT 59.641 47.619 0.00 0.00 0.00 2.75
1634 1690 2.580322 TCATTTGGTTGCAGGGGAGATA 59.420 45.455 0.00 0.00 0.00 1.98
1635 1691 3.205056 TCATTTGGTTGCAGGGGAGATAT 59.795 43.478 0.00 0.00 0.00 1.63
1636 1692 3.756082 TTTGGTTGCAGGGGAGATATT 57.244 42.857 0.00 0.00 0.00 1.28
1637 1693 3.756082 TTGGTTGCAGGGGAGATATTT 57.244 42.857 0.00 0.00 0.00 1.40
1638 1694 3.297134 TGGTTGCAGGGGAGATATTTC 57.703 47.619 0.00 0.00 0.00 2.17
1639 1695 2.091885 TGGTTGCAGGGGAGATATTTCC 60.092 50.000 3.60 3.60 36.46 3.13
1640 1696 2.091885 GGTTGCAGGGGAGATATTTCCA 60.092 50.000 13.95 0.00 39.09 3.53
1641 1697 3.217626 GTTGCAGGGGAGATATTTCCAG 58.782 50.000 13.95 4.77 39.09 3.86
1642 1698 1.776667 TGCAGGGGAGATATTTCCAGG 59.223 52.381 13.95 4.11 39.09 4.45
1643 1699 1.777272 GCAGGGGAGATATTTCCAGGT 59.223 52.381 13.95 0.00 39.09 4.00
1644 1700 2.979678 GCAGGGGAGATATTTCCAGGTA 59.020 50.000 13.95 0.00 39.09 3.08
1645 1701 3.244596 GCAGGGGAGATATTTCCAGGTAC 60.245 52.174 13.95 0.00 39.09 3.34
1646 1702 4.235372 CAGGGGAGATATTTCCAGGTACT 58.765 47.826 13.95 1.75 39.09 2.73
1657 1713 3.450115 AGGTACTGGACGAGGCGC 61.450 66.667 0.00 0.00 37.18 6.53
1658 1714 3.755628 GGTACTGGACGAGGCGCA 61.756 66.667 10.83 0.00 0.00 6.09
1659 1715 2.202623 GTACTGGACGAGGCGCAG 60.203 66.667 10.83 1.82 0.00 5.18
1660 1716 2.360726 TACTGGACGAGGCGCAGA 60.361 61.111 10.83 0.00 0.00 4.26
1661 1717 1.974875 TACTGGACGAGGCGCAGAA 60.975 57.895 10.83 0.00 0.00 3.02
1662 1718 1.529152 TACTGGACGAGGCGCAGAAA 61.529 55.000 10.83 0.00 0.00 2.52
1663 1719 2.048222 TGGACGAGGCGCAGAAAG 60.048 61.111 10.83 0.00 0.00 2.62
1664 1720 2.261671 GGACGAGGCGCAGAAAGA 59.738 61.111 10.83 0.00 0.00 2.52
1665 1721 1.374252 GGACGAGGCGCAGAAAGAA 60.374 57.895 10.83 0.00 0.00 2.52
1666 1722 1.627550 GGACGAGGCGCAGAAAGAAC 61.628 60.000 10.83 0.00 0.00 3.01
1667 1723 0.944311 GACGAGGCGCAGAAAGAACA 60.944 55.000 10.83 0.00 0.00 3.18
1668 1724 0.946221 ACGAGGCGCAGAAAGAACAG 60.946 55.000 10.83 0.00 0.00 3.16
1669 1725 1.630244 CGAGGCGCAGAAAGAACAGG 61.630 60.000 10.83 0.00 0.00 4.00
1670 1726 1.301677 GAGGCGCAGAAAGAACAGGG 61.302 60.000 10.83 0.00 0.00 4.45
1671 1727 2.335712 GGCGCAGAAAGAACAGGGG 61.336 63.158 10.83 0.00 0.00 4.79
1672 1728 1.302511 GCGCAGAAAGAACAGGGGA 60.303 57.895 0.30 0.00 0.00 4.81
1673 1729 0.678048 GCGCAGAAAGAACAGGGGAT 60.678 55.000 0.30 0.00 0.00 3.85
1674 1730 1.089920 CGCAGAAAGAACAGGGGATG 58.910 55.000 0.00 0.00 0.00 3.51
1675 1731 1.467920 GCAGAAAGAACAGGGGATGG 58.532 55.000 0.00 0.00 0.00 3.51
1676 1732 1.004745 GCAGAAAGAACAGGGGATGGA 59.995 52.381 0.00 0.00 0.00 3.41
1677 1733 2.357569 GCAGAAAGAACAGGGGATGGAT 60.358 50.000 0.00 0.00 0.00 3.41
1678 1734 3.285484 CAGAAAGAACAGGGGATGGATG 58.715 50.000 0.00 0.00 0.00 3.51
1679 1735 2.027385 GAAAGAACAGGGGATGGATGC 58.973 52.381 0.00 0.00 0.00 3.91
1680 1736 0.107017 AAGAACAGGGGATGGATGCG 60.107 55.000 0.00 0.00 0.00 4.73
1681 1737 1.224592 GAACAGGGGATGGATGCGT 59.775 57.895 0.00 0.00 0.00 5.24
1682 1738 0.394352 GAACAGGGGATGGATGCGTT 60.394 55.000 0.00 0.00 0.00 4.84
1683 1739 0.394352 AACAGGGGATGGATGCGTTC 60.394 55.000 0.00 0.00 0.00 3.95
1684 1740 1.889105 CAGGGGATGGATGCGTTCG 60.889 63.158 0.00 0.00 0.00 3.95
1685 1741 2.591715 GGGGATGGATGCGTTCGG 60.592 66.667 0.00 0.00 0.00 4.30
1686 1742 3.279875 GGGATGGATGCGTTCGGC 61.280 66.667 0.00 0.00 43.96 5.54
1687 1743 2.203070 GGATGGATGCGTTCGGCT 60.203 61.111 0.00 0.00 44.05 5.52
1688 1744 2.537560 GGATGGATGCGTTCGGCTG 61.538 63.158 0.00 0.00 44.05 4.85
1689 1745 1.815421 GATGGATGCGTTCGGCTGT 60.815 57.895 0.00 0.00 44.05 4.40
1690 1746 2.040213 GATGGATGCGTTCGGCTGTG 62.040 60.000 0.00 0.00 44.05 3.66
1691 1747 2.434185 GGATGCGTTCGGCTGTGA 60.434 61.111 0.00 0.00 44.05 3.58
1692 1748 2.740714 GGATGCGTTCGGCTGTGAC 61.741 63.158 0.00 0.00 44.05 3.67
1693 1749 3.071459 GATGCGTTCGGCTGTGACG 62.071 63.158 16.27 16.27 44.05 4.35
1696 1752 3.103911 CGTTCGGCTGTGACGGTC 61.104 66.667 13.82 0.00 33.33 4.79
1697 1753 2.737376 GTTCGGCTGTGACGGTCC 60.737 66.667 5.55 0.00 33.33 4.46
1698 1754 3.228017 TTCGGCTGTGACGGTCCA 61.228 61.111 5.55 2.63 33.33 4.02
1699 1755 3.509137 TTCGGCTGTGACGGTCCAC 62.509 63.158 5.55 4.89 33.33 4.02
1715 1771 3.836151 ACCGAACTGGGTGTTTGC 58.164 55.556 0.00 0.00 44.64 3.68
1716 1772 2.184167 ACCGAACTGGGTGTTTGCG 61.184 57.895 0.00 0.00 44.64 4.85
1717 1773 2.184167 CCGAACTGGGTGTTTGCGT 61.184 57.895 0.00 0.00 39.30 5.24
1718 1774 1.720694 CCGAACTGGGTGTTTGCGTT 61.721 55.000 0.00 0.00 39.30 4.84
1719 1775 0.938713 CGAACTGGGTGTTTGCGTTA 59.061 50.000 0.00 0.00 39.30 3.18
1720 1776 1.533731 CGAACTGGGTGTTTGCGTTAT 59.466 47.619 0.00 0.00 39.30 1.89
1721 1777 2.664424 CGAACTGGGTGTTTGCGTTATG 60.664 50.000 0.00 0.00 39.30 1.90
1722 1778 1.243902 ACTGGGTGTTTGCGTTATGG 58.756 50.000 0.00 0.00 0.00 2.74
1723 1779 0.525761 CTGGGTGTTTGCGTTATGGG 59.474 55.000 0.00 0.00 0.00 4.00
1724 1780 1.214325 GGGTGTTTGCGTTATGGGC 59.786 57.895 0.00 0.00 0.00 5.36
1725 1781 1.248101 GGGTGTTTGCGTTATGGGCT 61.248 55.000 0.00 0.00 0.00 5.19
1726 1782 0.109319 GGTGTTTGCGTTATGGGCTG 60.109 55.000 0.00 0.00 0.00 4.85
1727 1783 0.732538 GTGTTTGCGTTATGGGCTGC 60.733 55.000 0.00 0.00 0.00 5.25
1728 1784 0.893270 TGTTTGCGTTATGGGCTGCT 60.893 50.000 0.00 0.00 0.00 4.24
1729 1785 1.091537 GTTTGCGTTATGGGCTGCTA 58.908 50.000 0.00 0.00 0.00 3.49
1730 1786 1.470890 GTTTGCGTTATGGGCTGCTAA 59.529 47.619 0.00 0.00 0.00 3.09
1731 1787 1.091537 TTGCGTTATGGGCTGCTAAC 58.908 50.000 0.00 0.00 0.00 2.34
1732 1788 0.746563 TGCGTTATGGGCTGCTAACC 60.747 55.000 0.00 0.00 0.00 2.85
1733 1789 0.746563 GCGTTATGGGCTGCTAACCA 60.747 55.000 0.00 0.00 41.76 3.67
1735 1791 1.603802 CGTTATGGGCTGCTAACCATG 59.396 52.381 16.20 0.00 46.49 3.66
1736 1792 2.654863 GTTATGGGCTGCTAACCATGT 58.345 47.619 16.20 0.00 46.49 3.21
1737 1793 2.346766 TATGGGCTGCTAACCATGTG 57.653 50.000 16.20 0.00 46.49 3.21
1738 1794 0.332632 ATGGGCTGCTAACCATGTGT 59.667 50.000 7.93 0.00 45.40 3.72
1739 1795 0.988063 TGGGCTGCTAACCATGTGTA 59.012 50.000 0.00 0.00 0.00 2.90
1740 1796 1.339631 TGGGCTGCTAACCATGTGTAC 60.340 52.381 0.00 0.00 0.00 2.90
1741 1797 1.065418 GGGCTGCTAACCATGTGTACT 60.065 52.381 0.00 0.00 0.00 2.73
1742 1798 2.009774 GGCTGCTAACCATGTGTACTG 58.990 52.381 0.00 0.00 0.00 2.74
1743 1799 2.009774 GCTGCTAACCATGTGTACTGG 58.990 52.381 0.00 0.00 39.80 4.00
1744 1800 2.009774 CTGCTAACCATGTGTACTGGC 58.990 52.381 0.00 0.00 37.27 4.85
1745 1801 1.349357 TGCTAACCATGTGTACTGGCA 59.651 47.619 0.00 0.00 37.27 4.92
1746 1802 2.224646 TGCTAACCATGTGTACTGGCAA 60.225 45.455 0.00 0.00 37.27 4.52
1747 1803 3.016736 GCTAACCATGTGTACTGGCAAT 58.983 45.455 0.00 0.00 37.27 3.56
1748 1804 3.181497 GCTAACCATGTGTACTGGCAATG 60.181 47.826 0.00 0.00 37.27 2.82
1749 1805 1.838112 ACCATGTGTACTGGCAATGG 58.162 50.000 11.20 11.20 37.27 3.16
1750 1806 1.105457 CCATGTGTACTGGCAATGGG 58.895 55.000 5.84 0.00 0.00 4.00
1751 1807 0.457035 CATGTGTACTGGCAATGGGC 59.543 55.000 0.00 0.00 43.74 5.36
1762 1818 4.722526 TGGCAATGGGCATAAGTATAGT 57.277 40.909 0.00 0.00 45.76 2.12
1763 1819 5.834281 TGGCAATGGGCATAAGTATAGTA 57.166 39.130 0.00 0.00 45.76 1.82
1764 1820 6.387192 TGGCAATGGGCATAAGTATAGTAT 57.613 37.500 0.00 0.00 45.76 2.12
1765 1821 7.503492 TGGCAATGGGCATAAGTATAGTATA 57.497 36.000 0.00 0.00 45.76 1.47
1766 1822 8.101309 TGGCAATGGGCATAAGTATAGTATAT 57.899 34.615 0.00 0.00 45.76 0.86
1767 1823 9.219715 TGGCAATGGGCATAAGTATAGTATATA 57.780 33.333 0.00 0.00 45.76 0.86
1794 1850 3.681593 TTTGATGATTTGTTGGGCAGG 57.318 42.857 0.00 0.00 0.00 4.85
1795 1851 0.896923 TGATGATTTGTTGGGCAGGC 59.103 50.000 0.00 0.00 0.00 4.85
1796 1852 0.176449 GATGATTTGTTGGGCAGGCC 59.824 55.000 5.91 5.91 0.00 5.19
1797 1853 0.544833 ATGATTTGTTGGGCAGGCCA 60.545 50.000 12.83 12.83 37.98 5.36
1798 1854 1.293179 GATTTGTTGGGCAGGCCAC 59.707 57.895 17.12 11.67 37.98 5.01
1799 1855 2.490993 GATTTGTTGGGCAGGCCACG 62.491 60.000 17.12 0.00 37.98 4.94
1817 1873 3.046870 GCATGGTTTTGCCCGTGA 58.953 55.556 3.65 0.00 43.04 4.35
1818 1874 1.080569 GCATGGTTTTGCCCGTGAG 60.081 57.895 3.65 0.00 43.04 3.51
1819 1875 1.805428 GCATGGTTTTGCCCGTGAGT 61.805 55.000 3.65 0.00 43.04 3.41
1820 1876 1.529226 CATGGTTTTGCCCGTGAGTA 58.471 50.000 0.00 0.00 43.04 2.59
1821 1877 1.468520 CATGGTTTTGCCCGTGAGTAG 59.531 52.381 0.00 0.00 43.04 2.57
1822 1878 0.887387 TGGTTTTGCCCGTGAGTAGC 60.887 55.000 0.00 0.00 36.04 3.58
1823 1879 0.605589 GGTTTTGCCCGTGAGTAGCT 60.606 55.000 0.00 0.00 0.00 3.32
1824 1880 0.796927 GTTTTGCCCGTGAGTAGCTC 59.203 55.000 0.00 0.00 0.00 4.09
1825 1881 0.321298 TTTTGCCCGTGAGTAGCTCC 60.321 55.000 0.00 0.00 0.00 4.70
1826 1882 2.501223 TTTGCCCGTGAGTAGCTCCG 62.501 60.000 0.00 0.00 0.00 4.63
1827 1883 4.874977 GCCCGTGAGTAGCTCCGC 62.875 72.222 0.00 0.00 0.00 5.54
1828 1884 4.208686 CCCGTGAGTAGCTCCGCC 62.209 72.222 0.00 0.00 0.00 6.13
1829 1885 3.449227 CCGTGAGTAGCTCCGCCA 61.449 66.667 0.00 0.00 0.00 5.69
1830 1886 2.103143 CGTGAGTAGCTCCGCCAG 59.897 66.667 0.00 0.00 0.00 4.85
1831 1887 2.701780 CGTGAGTAGCTCCGCCAGT 61.702 63.158 0.00 0.00 0.00 4.00
1832 1888 1.153745 GTGAGTAGCTCCGCCAGTG 60.154 63.158 0.00 0.00 0.00 3.66
1833 1889 2.351244 TGAGTAGCTCCGCCAGTGG 61.351 63.158 4.20 4.20 0.00 4.00
1834 1890 3.077556 AGTAGCTCCGCCAGTGGG 61.078 66.667 12.15 0.59 37.18 4.61
1835 1891 3.391382 GTAGCTCCGCCAGTGGGT 61.391 66.667 12.15 0.00 36.17 4.51
1836 1892 2.056223 GTAGCTCCGCCAGTGGGTA 61.056 63.158 12.15 0.00 36.17 3.69
1837 1893 2.056223 TAGCTCCGCCAGTGGGTAC 61.056 63.158 12.15 0.00 36.17 3.34
1838 1894 2.791613 TAGCTCCGCCAGTGGGTACA 62.792 60.000 12.15 0.00 36.17 2.90
1839 1895 3.031417 GCTCCGCCAGTGGGTACAT 62.031 63.158 12.15 0.00 36.17 2.29
1840 1896 1.144057 CTCCGCCAGTGGGTACATC 59.856 63.158 12.15 0.00 36.17 3.06
1841 1897 2.189521 CCGCCAGTGGGTACATCC 59.810 66.667 12.15 0.00 36.17 3.51
1853 1909 2.561569 GGTACATCCCGGATCTTGTTG 58.438 52.381 0.73 0.00 0.00 3.33
1854 1910 1.940613 GTACATCCCGGATCTTGTTGC 59.059 52.381 0.73 0.00 0.00 4.17
1855 1911 0.394352 ACATCCCGGATCTTGTTGCC 60.394 55.000 0.73 0.00 0.00 4.52
1856 1912 1.153168 ATCCCGGATCTTGTTGCCG 60.153 57.895 0.73 0.00 44.42 5.69
1859 1915 3.177600 CGGATCTTGTTGCCGGTG 58.822 61.111 1.90 0.00 41.29 4.94
1860 1916 1.375396 CGGATCTTGTTGCCGGTGA 60.375 57.895 1.90 0.00 41.29 4.02
1861 1917 1.361668 CGGATCTTGTTGCCGGTGAG 61.362 60.000 1.90 0.00 41.29 3.51
1862 1918 1.648467 GGATCTTGTTGCCGGTGAGC 61.648 60.000 1.90 0.00 0.00 4.26
1863 1919 1.648467 GATCTTGTTGCCGGTGAGCC 61.648 60.000 1.90 0.00 0.00 4.70
1864 1920 3.365265 CTTGTTGCCGGTGAGCCC 61.365 66.667 1.90 0.00 0.00 5.19
1865 1921 4.966787 TTGTTGCCGGTGAGCCCC 62.967 66.667 1.90 0.00 0.00 5.80
1871 1927 4.740822 CCGGTGAGCCCCCTTTGG 62.741 72.222 0.00 0.00 0.00 3.28
1872 1928 3.646715 CGGTGAGCCCCCTTTGGA 61.647 66.667 0.00 0.00 35.39 3.53
1873 1929 2.035783 GGTGAGCCCCCTTTGGAC 59.964 66.667 0.00 0.00 35.39 4.02
1874 1930 2.840753 GGTGAGCCCCCTTTGGACA 61.841 63.158 0.00 0.00 35.39 4.02
1875 1931 1.384191 GTGAGCCCCCTTTGGACAT 59.616 57.895 0.00 0.00 35.39 3.06
1876 1932 0.967380 GTGAGCCCCCTTTGGACATG 60.967 60.000 0.00 0.00 35.39 3.21
1877 1933 2.037847 AGCCCCCTTTGGACATGC 59.962 61.111 0.00 0.00 35.39 4.06
1878 1934 2.283821 GCCCCCTTTGGACATGCA 60.284 61.111 0.00 0.00 35.39 3.96
1879 1935 1.686800 GCCCCCTTTGGACATGCAT 60.687 57.895 0.00 0.00 35.39 3.96
1880 1936 1.679559 GCCCCCTTTGGACATGCATC 61.680 60.000 0.00 0.00 35.39 3.91
1881 1937 1.044790 CCCCCTTTGGACATGCATCC 61.045 60.000 0.00 0.00 39.45 3.51
1882 1938 1.044790 CCCCTTTGGACATGCATCCC 61.045 60.000 0.00 1.43 38.06 3.85
1883 1939 0.032813 CCCTTTGGACATGCATCCCT 60.033 55.000 13.95 0.00 38.06 4.20
1884 1940 1.108776 CCTTTGGACATGCATCCCTG 58.891 55.000 13.95 0.19 38.06 4.45
1893 1949 3.749981 GCATCCCTGCCATTACCG 58.250 61.111 0.00 0.00 42.88 4.02
1894 1950 1.152963 GCATCCCTGCCATTACCGT 60.153 57.895 0.00 0.00 42.88 4.83
1895 1951 1.166531 GCATCCCTGCCATTACCGTC 61.167 60.000 0.00 0.00 42.88 4.79
1896 1952 0.880278 CATCCCTGCCATTACCGTCG 60.880 60.000 0.00 0.00 0.00 5.12
1897 1953 2.660258 ATCCCTGCCATTACCGTCGC 62.660 60.000 0.00 0.00 0.00 5.19
1898 1954 2.895372 CCTGCCATTACCGTCGCC 60.895 66.667 0.00 0.00 0.00 5.54
1899 1955 2.186903 CTGCCATTACCGTCGCCT 59.813 61.111 0.00 0.00 0.00 5.52
1900 1956 1.449601 CTGCCATTACCGTCGCCTT 60.450 57.895 0.00 0.00 0.00 4.35
1901 1957 1.429148 CTGCCATTACCGTCGCCTTC 61.429 60.000 0.00 0.00 0.00 3.46
1902 1958 1.448893 GCCATTACCGTCGCCTTCA 60.449 57.895 0.00 0.00 0.00 3.02
1903 1959 0.814010 GCCATTACCGTCGCCTTCAT 60.814 55.000 0.00 0.00 0.00 2.57
1904 1960 0.937304 CCATTACCGTCGCCTTCATG 59.063 55.000 0.00 0.00 0.00 3.07
1905 1961 0.937304 CATTACCGTCGCCTTCATGG 59.063 55.000 0.00 0.00 39.35 3.66
1914 1970 2.440147 CCTTCATGGCCACCACCA 59.560 61.111 8.16 0.00 45.82 4.17
1915 1971 1.228831 CCTTCATGGCCACCACCAA 60.229 57.895 8.16 0.00 44.65 3.67
1916 1972 1.535204 CCTTCATGGCCACCACCAAC 61.535 60.000 8.16 0.00 44.65 3.77
1917 1973 0.827089 CTTCATGGCCACCACCAACA 60.827 55.000 8.16 0.00 44.65 3.33
1918 1974 0.827089 TTCATGGCCACCACCAACAG 60.827 55.000 8.16 0.00 44.65 3.16
1919 1975 2.601367 ATGGCCACCACCAACAGC 60.601 61.111 8.16 0.00 44.65 4.40
1920 1976 3.449494 ATGGCCACCACCAACAGCA 62.449 57.895 8.16 0.00 44.65 4.41
1921 1977 3.297620 GGCCACCACCAACAGCAG 61.298 66.667 0.00 0.00 0.00 4.24
1922 1978 2.519302 GCCACCACCAACAGCAGT 60.519 61.111 0.00 0.00 0.00 4.40
1923 1979 2.127232 GCCACCACCAACAGCAGTT 61.127 57.895 0.00 0.00 38.88 3.16
1931 1987 2.598394 AACAGCAGTTGCCGCCAT 60.598 55.556 0.00 0.00 43.38 4.40
1932 1988 2.629656 AACAGCAGTTGCCGCCATC 61.630 57.895 0.00 0.00 43.38 3.51
1933 1989 4.170062 CAGCAGTTGCCGCCATCG 62.170 66.667 0.00 0.00 43.38 3.84
1945 2001 2.815211 CCATCGGCAGTGTCGTGG 60.815 66.667 17.93 18.78 30.45 4.94
1946 2002 2.048222 CATCGGCAGTGTCGTGGT 60.048 61.111 17.93 1.72 30.45 4.16
1947 2003 1.214325 CATCGGCAGTGTCGTGGTA 59.786 57.895 17.93 0.00 30.45 3.25
1948 2004 0.179111 CATCGGCAGTGTCGTGGTAT 60.179 55.000 17.93 0.00 30.45 2.73
1949 2005 0.535335 ATCGGCAGTGTCGTGGTATT 59.465 50.000 17.93 0.00 30.45 1.89
1950 2006 0.108992 TCGGCAGTGTCGTGGTATTC 60.109 55.000 17.93 0.00 30.45 1.75
1951 2007 0.108804 CGGCAGTGTCGTGGTATTCT 60.109 55.000 9.46 0.00 0.00 2.40
2153 2209 0.693049 ACAAGGGCTTAGTGTGAGGG 59.307 55.000 0.00 0.00 0.00 4.30
2154 2210 0.693049 CAAGGGCTTAGTGTGAGGGT 59.307 55.000 0.00 0.00 0.00 4.34
2155 2211 1.906574 CAAGGGCTTAGTGTGAGGGTA 59.093 52.381 0.00 0.00 0.00 3.69
2156 2212 2.304761 CAAGGGCTTAGTGTGAGGGTAA 59.695 50.000 0.00 0.00 0.00 2.85
2157 2213 2.188817 AGGGCTTAGTGTGAGGGTAAG 58.811 52.381 0.00 0.00 0.00 2.34
2158 2214 2.185387 GGGCTTAGTGTGAGGGTAAGA 58.815 52.381 0.00 0.00 0.00 2.10
2159 2215 2.093606 GGGCTTAGTGTGAGGGTAAGAC 60.094 54.545 0.00 0.00 31.87 3.01
2160 2216 2.832733 GGCTTAGTGTGAGGGTAAGACT 59.167 50.000 0.00 0.00 30.28 3.24
2161 2217 3.368531 GGCTTAGTGTGAGGGTAAGACTG 60.369 52.174 0.00 0.00 30.28 3.51
2162 2218 3.851098 CTTAGTGTGAGGGTAAGACTGC 58.149 50.000 0.00 0.00 0.00 4.40
2163 2219 2.016905 AGTGTGAGGGTAAGACTGCT 57.983 50.000 0.00 0.00 0.00 4.24
2164 2220 1.620819 AGTGTGAGGGTAAGACTGCTG 59.379 52.381 0.00 0.00 0.00 4.41
2165 2221 0.321671 TGTGAGGGTAAGACTGCTGC 59.678 55.000 0.00 0.00 0.00 5.25
2166 2222 0.610687 GTGAGGGTAAGACTGCTGCT 59.389 55.000 0.00 0.00 0.00 4.24
2167 2223 0.610174 TGAGGGTAAGACTGCTGCTG 59.390 55.000 4.89 4.89 0.00 4.41
2168 2224 0.898320 GAGGGTAAGACTGCTGCTGA 59.102 55.000 13.69 0.00 0.00 4.26
2169 2225 1.484240 GAGGGTAAGACTGCTGCTGAT 59.516 52.381 13.69 2.10 0.00 2.90
2170 2226 2.695666 GAGGGTAAGACTGCTGCTGATA 59.304 50.000 13.69 1.21 0.00 2.15
2171 2227 2.697751 AGGGTAAGACTGCTGCTGATAG 59.302 50.000 13.69 0.00 0.00 2.08
2172 2228 2.224161 GGGTAAGACTGCTGCTGATAGG 60.224 54.545 13.69 0.00 0.00 2.57
2173 2229 2.695666 GGTAAGACTGCTGCTGATAGGA 59.304 50.000 13.69 0.00 0.00 2.94
2174 2230 3.243704 GGTAAGACTGCTGCTGATAGGAG 60.244 52.174 13.69 0.00 41.36 3.69
2179 2235 3.543537 CTGCTGATAGGAGCGGGT 58.456 61.111 0.00 0.00 42.32 5.28
2180 2236 2.733590 CTGCTGATAGGAGCGGGTA 58.266 57.895 0.00 0.00 42.32 3.69
2181 2237 1.261480 CTGCTGATAGGAGCGGGTAT 58.739 55.000 0.00 0.00 42.32 2.73
2182 2238 0.969149 TGCTGATAGGAGCGGGTATG 59.031 55.000 0.00 0.00 42.32 2.39
2183 2239 0.390472 GCTGATAGGAGCGGGTATGC 60.390 60.000 0.00 0.00 0.00 3.14
2184 2240 0.109086 CTGATAGGAGCGGGTATGCG 60.109 60.000 0.00 0.00 40.67 4.73
2185 2241 0.538746 TGATAGGAGCGGGTATGCGA 60.539 55.000 0.00 0.00 40.67 5.10
2186 2242 0.171455 GATAGGAGCGGGTATGCGAG 59.829 60.000 0.00 0.00 40.67 5.03
2187 2243 0.539901 ATAGGAGCGGGTATGCGAGT 60.540 55.000 0.00 0.00 40.67 4.18
2188 2244 0.109153 TAGGAGCGGGTATGCGAGTA 59.891 55.000 0.00 0.00 40.67 2.59
2189 2245 1.173444 AGGAGCGGGTATGCGAGTAG 61.173 60.000 0.00 0.00 40.67 2.57
2207 2263 3.220447 GCACACGCTAGTTTACCCA 57.780 52.632 0.00 0.00 34.30 4.51
2208 2264 1.076332 GCACACGCTAGTTTACCCAG 58.924 55.000 0.00 0.00 34.30 4.45
2209 2265 1.722011 CACACGCTAGTTTACCCAGG 58.278 55.000 0.00 0.00 0.00 4.45
2210 2266 1.001633 CACACGCTAGTTTACCCAGGT 59.998 52.381 0.00 0.00 0.00 4.00
2211 2267 1.695788 ACACGCTAGTTTACCCAGGTT 59.304 47.619 0.00 0.00 0.00 3.50
2212 2268 2.289257 ACACGCTAGTTTACCCAGGTTC 60.289 50.000 0.00 0.00 0.00 3.62
2213 2269 1.067354 ACGCTAGTTTACCCAGGTTCG 60.067 52.381 0.00 0.00 0.00 3.95
2214 2270 1.738030 CGCTAGTTTACCCAGGTTCGG 60.738 57.143 0.00 0.00 0.00 4.30
2215 2271 1.551883 GCTAGTTTACCCAGGTTCGGA 59.448 52.381 0.00 0.00 0.00 4.55
2216 2272 2.418334 GCTAGTTTACCCAGGTTCGGAG 60.418 54.545 0.00 0.00 0.00 4.63
2217 2273 0.323957 AGTTTACCCAGGTTCGGAGC 59.676 55.000 0.00 0.00 0.00 4.70
2218 2274 0.323957 GTTTACCCAGGTTCGGAGCT 59.676 55.000 0.00 0.00 0.00 4.09
2219 2275 0.611714 TTTACCCAGGTTCGGAGCTC 59.388 55.000 4.71 4.71 0.00 4.09
2220 2276 0.252103 TTACCCAGGTTCGGAGCTCT 60.252 55.000 14.64 0.00 0.00 4.09
2221 2277 0.683504 TACCCAGGTTCGGAGCTCTC 60.684 60.000 14.64 2.76 0.00 3.20
2222 2278 2.726351 CCCAGGTTCGGAGCTCTCC 61.726 68.421 14.64 11.06 46.18 3.71
2237 2293 2.068834 TCTCCGGAGAGATAACACCC 57.931 55.000 30.49 0.00 44.42 4.61
2238 2294 1.041437 CTCCGGAGAGATAACACCCC 58.959 60.000 28.21 0.00 43.39 4.95
2239 2295 0.635009 TCCGGAGAGATAACACCCCT 59.365 55.000 0.00 0.00 0.00 4.79
2240 2296 1.854939 TCCGGAGAGATAACACCCCTA 59.145 52.381 0.00 0.00 0.00 3.53
2241 2297 1.962100 CCGGAGAGATAACACCCCTAC 59.038 57.143 0.00 0.00 0.00 3.18
2242 2298 2.424523 CCGGAGAGATAACACCCCTACT 60.425 54.545 0.00 0.00 0.00 2.57
2243 2299 2.885894 CGGAGAGATAACACCCCTACTC 59.114 54.545 0.00 0.00 0.00 2.59
2244 2300 3.232662 GGAGAGATAACACCCCTACTCC 58.767 54.545 0.00 0.00 36.41 3.85
2245 2301 3.117054 GGAGAGATAACACCCCTACTCCT 60.117 52.174 0.00 0.00 39.36 3.69
2246 2302 3.892588 GAGAGATAACACCCCTACTCCTG 59.107 52.174 0.00 0.00 0.00 3.86
2247 2303 2.365941 GAGATAACACCCCTACTCCTGC 59.634 54.545 0.00 0.00 0.00 4.85
2248 2304 2.116238 GATAACACCCCTACTCCTGCA 58.884 52.381 0.00 0.00 0.00 4.41
2249 2305 2.263895 TAACACCCCTACTCCTGCAT 57.736 50.000 0.00 0.00 0.00 3.96
2250 2306 0.620556 AACACCCCTACTCCTGCATG 59.379 55.000 0.00 0.00 0.00 4.06
2251 2307 0.547712 ACACCCCTACTCCTGCATGT 60.548 55.000 0.00 0.00 0.00 3.21
2252 2308 0.179000 CACCCCTACTCCTGCATGTC 59.821 60.000 0.00 0.00 0.00 3.06
2253 2309 0.043334 ACCCCTACTCCTGCATGTCT 59.957 55.000 0.00 0.00 0.00 3.41
2254 2310 0.467384 CCCCTACTCCTGCATGTCTG 59.533 60.000 0.00 0.00 0.00 3.51
2255 2311 1.489481 CCCTACTCCTGCATGTCTGA 58.511 55.000 0.00 0.00 0.00 3.27
2256 2312 1.411977 CCCTACTCCTGCATGTCTGAG 59.588 57.143 0.00 0.30 0.00 3.35
2257 2313 2.106566 CCTACTCCTGCATGTCTGAGT 58.893 52.381 14.57 14.57 0.00 3.41
2258 2314 3.291584 CCTACTCCTGCATGTCTGAGTA 58.708 50.000 15.07 15.07 0.00 2.59
2259 2315 3.894427 CCTACTCCTGCATGTCTGAGTAT 59.106 47.826 15.79 0.82 0.00 2.12
2260 2316 4.022416 CCTACTCCTGCATGTCTGAGTATC 60.022 50.000 15.79 0.00 0.00 2.24
2261 2317 3.641046 ACTCCTGCATGTCTGAGTATCT 58.359 45.455 10.22 0.00 34.92 1.98
2262 2318 4.797743 ACTCCTGCATGTCTGAGTATCTA 58.202 43.478 10.22 0.00 34.92 1.98
2263 2319 5.392995 ACTCCTGCATGTCTGAGTATCTAT 58.607 41.667 10.22 0.00 34.92 1.98
2264 2320 6.547402 ACTCCTGCATGTCTGAGTATCTATA 58.453 40.000 10.22 0.00 34.92 1.31
2265 2321 6.658816 ACTCCTGCATGTCTGAGTATCTATAG 59.341 42.308 10.22 0.00 34.92 1.31
2266 2322 6.547402 TCCTGCATGTCTGAGTATCTATAGT 58.453 40.000 0.00 0.00 34.92 2.12
2267 2323 7.690256 TCCTGCATGTCTGAGTATCTATAGTA 58.310 38.462 0.00 0.00 34.92 1.82
2268 2324 8.332487 TCCTGCATGTCTGAGTATCTATAGTAT 58.668 37.037 0.00 0.00 34.92 2.12
2269 2325 9.620259 CCTGCATGTCTGAGTATCTATAGTATA 57.380 37.037 0.00 0.00 34.92 1.47
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.078143 GCCTTCGGCTCACCTCATT 60.078 57.895 0.00 0.00 46.69 2.57
1 2 2.586792 GCCTTCGGCTCACCTCAT 59.413 61.111 0.00 0.00 46.69 2.90
33 34 1.448717 GCTCTGACGAGGGAAAGGC 60.449 63.158 0.00 0.00 37.75 4.35
37 38 2.973899 GCAGCTCTGACGAGGGAA 59.026 61.111 0.29 0.00 37.75 3.97
52 53 3.810386 TCTACTACAACATGTTTTGCGCA 59.190 39.130 5.66 5.66 0.00 6.09
54 55 5.050363 ACTGTCTACTACAACATGTTTTGCG 60.050 40.000 8.77 0.00 37.74 4.85
70 71 3.301116 GCGACGAATTTCTGACTGTCTAC 59.699 47.826 9.51 0.00 0.00 2.59
71 72 3.499048 GCGACGAATTTCTGACTGTCTA 58.501 45.455 9.51 0.00 0.00 2.59
72 73 2.329379 GCGACGAATTTCTGACTGTCT 58.671 47.619 9.51 0.00 0.00 3.41
82 83 1.702491 GGCCTTAGCGCGACGAATTT 61.702 55.000 12.10 0.00 41.24 1.82
85 86 4.807039 GGGCCTTAGCGCGACGAA 62.807 66.667 12.10 2.86 42.59 3.85
92 93 1.757682 TGTTTTATGGGGCCTTAGCG 58.242 50.000 0.84 0.00 41.24 4.26
108 109 3.290308 TGTTGTTCTTGTGCGTTTGTT 57.710 38.095 0.00 0.00 0.00 2.83
111 112 2.601804 GGTTGTTGTTCTTGTGCGTTT 58.398 42.857 0.00 0.00 0.00 3.60
115 116 0.869880 GGCGGTTGTTGTTCTTGTGC 60.870 55.000 0.00 0.00 0.00 4.57
119 120 2.719354 GCGGCGGTTGTTGTTCTT 59.281 55.556 9.78 0.00 0.00 2.52
172 173 8.144155 TGTTCGTCTATGTTCATGTGTTTTTA 57.856 30.769 0.00 0.00 0.00 1.52
173 174 7.022055 TGTTCGTCTATGTTCATGTGTTTTT 57.978 32.000 0.00 0.00 0.00 1.94
176 177 5.049680 GGTTGTTCGTCTATGTTCATGTGTT 60.050 40.000 0.00 0.00 0.00 3.32
193 194 1.002087 ACTCGGATCTGGTGGTTGTTC 59.998 52.381 0.62 0.00 0.00 3.18
194 195 1.056660 ACTCGGATCTGGTGGTTGTT 58.943 50.000 0.62 0.00 0.00 2.83
196 197 3.328382 TTTACTCGGATCTGGTGGTTG 57.672 47.619 0.62 0.00 0.00 3.77
197 198 3.118371 GGATTTACTCGGATCTGGTGGTT 60.118 47.826 0.62 0.00 0.00 3.67
200 201 3.819564 TGGATTTACTCGGATCTGGTG 57.180 47.619 0.62 0.00 0.00 4.17
202 203 4.607293 TGATGGATTTACTCGGATCTGG 57.393 45.455 0.62 0.00 0.00 3.86
203 204 6.201806 GTCTTTGATGGATTTACTCGGATCTG 59.798 42.308 0.00 0.00 0.00 2.90
212 213 7.040409 GGGGATATGTGTCTTTGATGGATTTAC 60.040 40.741 0.00 0.00 0.00 2.01
213 214 7.004086 GGGGATATGTGTCTTTGATGGATTTA 58.996 38.462 0.00 0.00 0.00 1.40
230 231 2.366916 GAGGTGTGTCTCTGGGGATATG 59.633 54.545 0.00 0.00 0.00 1.78
233 234 0.117140 TGAGGTGTGTCTCTGGGGAT 59.883 55.000 0.00 0.00 34.98 3.85
234 235 0.105194 TTGAGGTGTGTCTCTGGGGA 60.105 55.000 0.00 0.00 34.98 4.81
235 236 0.035458 GTTGAGGTGTGTCTCTGGGG 59.965 60.000 0.00 0.00 34.98 4.96
236 237 0.758734 TGTTGAGGTGTGTCTCTGGG 59.241 55.000 0.00 0.00 34.98 4.45
257 258 2.279517 CTAGCATCGTCGGTGGGC 60.280 66.667 7.76 0.00 0.00 5.36
271 272 1.893801 AGTCCCTGTTCCAACGTCTAG 59.106 52.381 0.00 0.00 0.00 2.43
274 275 2.618053 CATAGTCCCTGTTCCAACGTC 58.382 52.381 0.00 0.00 0.00 4.34
278 279 1.281867 CCTGCATAGTCCCTGTTCCAA 59.718 52.381 0.00 0.00 0.00 3.53
279 280 0.911769 CCTGCATAGTCCCTGTTCCA 59.088 55.000 0.00 0.00 0.00 3.53
284 290 0.755686 GTCTCCCTGCATAGTCCCTG 59.244 60.000 0.00 0.00 0.00 4.45
293 299 4.166725 AGATGGAATAAATGTCTCCCTGCA 59.833 41.667 0.00 0.00 0.00 4.41
296 302 6.159398 ACTGAAGATGGAATAAATGTCTCCCT 59.841 38.462 0.00 0.00 0.00 4.20
304 310 4.818546 CGGCTCACTGAAGATGGAATAAAT 59.181 41.667 0.00 0.00 0.00 1.40
318 324 4.988598 AACGGTGGCGGCTCACTG 62.989 66.667 21.29 21.29 46.43 3.66
330 336 1.004918 CTCAGGAAGGCGAAACGGT 60.005 57.895 0.00 0.00 0.00 4.83
331 337 2.391389 GCTCAGGAAGGCGAAACGG 61.391 63.158 0.00 0.00 0.00 4.44
335 341 0.320771 GTTCTGCTCAGGAAGGCGAA 60.321 55.000 0.00 0.00 0.00 4.70
346 352 3.211045 TGTTAGGGTTTGTGTTCTGCTC 58.789 45.455 0.00 0.00 0.00 4.26
348 354 4.379339 TTTGTTAGGGTTTGTGTTCTGC 57.621 40.909 0.00 0.00 0.00 4.26
358 364 6.954487 ATTTTCTCGAGTTTTGTTAGGGTT 57.046 33.333 13.13 0.00 0.00 4.11
381 387 3.832615 GGAGGGCTCCGTTTTTAGATA 57.167 47.619 0.00 0.00 40.36 1.98
406 412 3.390521 TGGATCGCGGTCCTTGCT 61.391 61.111 36.40 0.00 39.12 3.91
408 414 1.519455 GAGTGGATCGCGGTCCTTG 60.519 63.158 36.40 0.00 39.12 3.61
417 423 2.502492 ATGGGAGCGGAGTGGATCG 61.502 63.158 0.00 0.00 0.00 3.69
441 447 1.738099 CTCGTCTTCGGTGGCCTTG 60.738 63.158 3.32 0.00 37.69 3.61
539 545 5.953548 TGTGGAATCAATCACCTGAAATCAT 59.046 36.000 0.00 0.00 33.29 2.45
553 559 3.407698 ACGCACTACATTGTGGAATCAA 58.592 40.909 7.20 0.00 38.31 2.57
581 587 9.824534 ATGTTTGCAAAGTTTGACTTTTAAAAG 57.175 25.926 23.38 23.38 45.38 2.27
583 589 9.604626 CAATGTTTGCAAAGTTTGACTTTTAAA 57.395 25.926 19.82 7.02 45.38 1.52
595 601 7.763528 TGTAAACTTGATCAATGTTTGCAAAGT 59.236 29.630 29.21 14.03 40.98 2.66
689 712 9.436957 AACTTTTATCATGTCATCTAGAACGTT 57.563 29.630 0.00 0.00 0.00 3.99
747 788 6.905736 TCTCTCTCTCTCCATAACATAGTGT 58.094 40.000 0.00 0.00 0.00 3.55
758 799 3.963374 CTCTCTCTCTCTCTCTCTCTCCA 59.037 52.174 0.00 0.00 0.00 3.86
762 803 8.128322 ACATATACTCTCTCTCTCTCTCTCTC 57.872 42.308 0.00 0.00 0.00 3.20
763 804 8.497910 AACATATACTCTCTCTCTCTCTCTCT 57.502 38.462 0.00 0.00 0.00 3.10
767 808 9.793259 CCTTTAACATATACTCTCTCTCTCTCT 57.207 37.037 0.00 0.00 0.00 3.10
768 809 9.010029 CCCTTTAACATATACTCTCTCTCTCTC 57.990 40.741 0.00 0.00 0.00 3.20
769 810 8.507761 ACCCTTTAACATATACTCTCTCTCTCT 58.492 37.037 0.00 0.00 0.00 3.10
770 811 8.700439 ACCCTTTAACATATACTCTCTCTCTC 57.300 38.462 0.00 0.00 0.00 3.20
771 812 7.446013 CGACCCTTTAACATATACTCTCTCTCT 59.554 40.741 0.00 0.00 0.00 3.10
772 813 7.586747 CGACCCTTTAACATATACTCTCTCTC 58.413 42.308 0.00 0.00 0.00 3.20
773 814 6.016108 GCGACCCTTTAACATATACTCTCTCT 60.016 42.308 0.00 0.00 0.00 3.10
777 818 4.652421 TGGCGACCCTTTAACATATACTCT 59.348 41.667 0.00 0.00 0.00 3.24
802 843 4.985409 AGCTCTAGTTGACTTTTGTTCTCG 59.015 41.667 0.00 0.00 0.00 4.04
803 844 6.704050 AGAAGCTCTAGTTGACTTTTGTTCTC 59.296 38.462 0.00 0.00 0.00 2.87
813 854 4.233789 CACAGTCAGAAGCTCTAGTTGAC 58.766 47.826 0.00 0.00 38.68 3.18
814 855 3.305676 GCACAGTCAGAAGCTCTAGTTGA 60.306 47.826 0.00 0.00 0.00 3.18
815 856 2.992543 GCACAGTCAGAAGCTCTAGTTG 59.007 50.000 0.00 0.00 0.00 3.16
818 863 2.878580 CAGCACAGTCAGAAGCTCTAG 58.121 52.381 0.00 0.00 34.61 2.43
912 957 0.247145 GTCCTAAAATGCGTCGCACG 60.247 55.000 24.34 8.54 43.04 5.34
923 968 2.358984 GCGGCCGGTGTCCTAAAA 60.359 61.111 29.38 0.00 0.00 1.52
924 969 3.179888 TTGCGGCCGGTGTCCTAAA 62.180 57.895 29.38 0.00 0.00 1.85
925 970 3.599285 CTTGCGGCCGGTGTCCTAA 62.599 63.158 29.38 5.93 0.00 2.69
976 1021 1.004440 GCTGGGTCGCCTATGGATC 60.004 63.158 0.00 0.00 0.00 3.36
995 1040 3.330853 CTTCGTAGGCCATCGCGC 61.331 66.667 5.01 0.00 35.02 6.86
996 1041 3.330853 GCTTCGTAGGCCATCGCG 61.331 66.667 5.01 0.00 35.02 5.87
1048 1096 2.046892 GAGGAAGAGCCGCTGCAA 60.047 61.111 0.00 0.00 43.43 4.08
1104 1152 1.174078 TGCCGAACGAGTAGGTGACA 61.174 55.000 0.00 0.00 0.00 3.58
1106 1154 0.038892 GTTGCCGAACGAGTAGGTGA 60.039 55.000 0.00 0.00 0.00 4.02
1273 1321 3.115892 CTAGTTTGCCGGCGCGAA 61.116 61.111 23.90 13.84 38.08 4.70
1303 1351 3.140225 GACGCATCTCCGAGGTCCC 62.140 68.421 0.00 0.00 0.00 4.46
1306 1354 1.679305 ACTGACGCATCTCCGAGGT 60.679 57.895 0.00 0.00 0.00 3.85
1323 1371 5.345702 TGTACTATTGATCGCCACTAACAC 58.654 41.667 0.00 0.00 0.00 3.32
1388 1436 1.472480 CACGAATTACCCAAGGCCAAG 59.528 52.381 5.01 0.00 0.00 3.61
1389 1437 1.202952 ACACGAATTACCCAAGGCCAA 60.203 47.619 5.01 0.00 0.00 4.52
1390 1438 0.402504 ACACGAATTACCCAAGGCCA 59.597 50.000 5.01 0.00 0.00 5.36
1483 1536 5.891551 GGAGGGAAATTTATTCACTTGCCTA 59.108 40.000 0.00 0.00 39.44 3.93
1593 1646 3.311322 TGAAGCCTAATATGTTTTCGGCG 59.689 43.478 0.00 0.00 42.16 6.46
1602 1656 5.904941 TGCAACCAAATGAAGCCTAATATG 58.095 37.500 0.00 0.00 0.00 1.78
1614 1670 1.856629 ATCTCCCCTGCAACCAAATG 58.143 50.000 0.00 0.00 0.00 2.32
1619 1675 2.091885 TGGAAATATCTCCCCTGCAACC 60.092 50.000 0.00 0.00 34.22 3.77
1620 1676 3.217626 CTGGAAATATCTCCCCTGCAAC 58.782 50.000 0.00 0.00 34.22 4.17
1621 1677 2.175499 CCTGGAAATATCTCCCCTGCAA 59.825 50.000 0.00 0.00 34.22 4.08
1622 1678 1.776667 CCTGGAAATATCTCCCCTGCA 59.223 52.381 0.00 0.00 34.22 4.41
1623 1679 1.777272 ACCTGGAAATATCTCCCCTGC 59.223 52.381 0.00 0.00 34.22 4.85
1624 1680 4.040952 CAGTACCTGGAAATATCTCCCCTG 59.959 50.000 0.00 0.00 34.22 4.45
1625 1681 4.235372 CAGTACCTGGAAATATCTCCCCT 58.765 47.826 0.00 0.00 34.22 4.79
1626 1682 4.625607 CAGTACCTGGAAATATCTCCCC 57.374 50.000 0.00 0.00 34.22 4.81
1639 1695 2.490217 CGCCTCGTCCAGTACCTG 59.510 66.667 0.00 0.00 0.00 4.00
1640 1696 3.450115 GCGCCTCGTCCAGTACCT 61.450 66.667 0.00 0.00 0.00 3.08
1641 1697 3.701604 CTGCGCCTCGTCCAGTACC 62.702 68.421 4.18 0.00 0.00 3.34
1642 1698 2.202623 CTGCGCCTCGTCCAGTAC 60.203 66.667 4.18 0.00 0.00 2.73
1643 1699 1.529152 TTTCTGCGCCTCGTCCAGTA 61.529 55.000 4.18 0.00 0.00 2.74
1644 1700 2.771763 CTTTCTGCGCCTCGTCCAGT 62.772 60.000 4.18 0.00 0.00 4.00
1645 1701 2.048222 TTTCTGCGCCTCGTCCAG 60.048 61.111 4.18 0.00 0.00 3.86
1646 1702 2.048222 CTTTCTGCGCCTCGTCCA 60.048 61.111 4.18 0.00 0.00 4.02
1647 1703 1.374252 TTCTTTCTGCGCCTCGTCC 60.374 57.895 4.18 0.00 0.00 4.79
1648 1704 0.944311 TGTTCTTTCTGCGCCTCGTC 60.944 55.000 4.18 0.00 0.00 4.20
1649 1705 0.946221 CTGTTCTTTCTGCGCCTCGT 60.946 55.000 4.18 0.00 0.00 4.18
1650 1706 1.630244 CCTGTTCTTTCTGCGCCTCG 61.630 60.000 4.18 0.00 0.00 4.63
1651 1707 1.301677 CCCTGTTCTTTCTGCGCCTC 61.302 60.000 4.18 0.00 0.00 4.70
1652 1708 1.302832 CCCTGTTCTTTCTGCGCCT 60.303 57.895 4.18 0.00 0.00 5.52
1653 1709 2.335712 CCCCTGTTCTTTCTGCGCC 61.336 63.158 4.18 0.00 0.00 6.53
1654 1710 0.678048 ATCCCCTGTTCTTTCTGCGC 60.678 55.000 0.00 0.00 0.00 6.09
1655 1711 1.089920 CATCCCCTGTTCTTTCTGCG 58.910 55.000 0.00 0.00 0.00 5.18
1656 1712 1.004745 TCCATCCCCTGTTCTTTCTGC 59.995 52.381 0.00 0.00 0.00 4.26
1657 1713 3.285484 CATCCATCCCCTGTTCTTTCTG 58.715 50.000 0.00 0.00 0.00 3.02
1658 1714 2.357569 GCATCCATCCCCTGTTCTTTCT 60.358 50.000 0.00 0.00 0.00 2.52
1659 1715 2.027385 GCATCCATCCCCTGTTCTTTC 58.973 52.381 0.00 0.00 0.00 2.62
1660 1716 1.683011 CGCATCCATCCCCTGTTCTTT 60.683 52.381 0.00 0.00 0.00 2.52
1661 1717 0.107017 CGCATCCATCCCCTGTTCTT 60.107 55.000 0.00 0.00 0.00 2.52
1662 1718 1.274703 ACGCATCCATCCCCTGTTCT 61.275 55.000 0.00 0.00 0.00 3.01
1663 1719 0.394352 AACGCATCCATCCCCTGTTC 60.394 55.000 0.00 0.00 0.00 3.18
1664 1720 0.394352 GAACGCATCCATCCCCTGTT 60.394 55.000 0.00 0.00 0.00 3.16
1665 1721 1.224592 GAACGCATCCATCCCCTGT 59.775 57.895 0.00 0.00 0.00 4.00
1666 1722 1.889105 CGAACGCATCCATCCCCTG 60.889 63.158 0.00 0.00 0.00 4.45
1667 1723 2.505982 CGAACGCATCCATCCCCT 59.494 61.111 0.00 0.00 0.00 4.79
1668 1724 2.591715 CCGAACGCATCCATCCCC 60.592 66.667 0.00 0.00 0.00 4.81
1669 1725 3.279875 GCCGAACGCATCCATCCC 61.280 66.667 0.00 0.00 37.47 3.85
1670 1726 2.203070 AGCCGAACGCATCCATCC 60.203 61.111 0.00 0.00 41.38 3.51
1671 1727 1.815421 ACAGCCGAACGCATCCATC 60.815 57.895 0.00 0.00 41.38 3.51
1672 1728 2.108514 CACAGCCGAACGCATCCAT 61.109 57.895 0.00 0.00 41.38 3.41
1673 1729 2.741985 CACAGCCGAACGCATCCA 60.742 61.111 0.00 0.00 41.38 3.41
1674 1730 2.434185 TCACAGCCGAACGCATCC 60.434 61.111 0.00 0.00 41.38 3.51
1675 1731 2.778679 GTCACAGCCGAACGCATC 59.221 61.111 0.00 0.00 41.38 3.91
1676 1732 3.112075 CGTCACAGCCGAACGCAT 61.112 61.111 0.00 0.00 41.38 4.73
1679 1735 3.103911 GACCGTCACAGCCGAACG 61.104 66.667 0.00 0.00 36.22 3.95
1680 1736 2.737376 GGACCGTCACAGCCGAAC 60.737 66.667 0.00 0.00 0.00 3.95
1681 1737 3.228017 TGGACCGTCACAGCCGAA 61.228 61.111 0.00 0.00 0.00 4.30
1682 1738 3.986006 GTGGACCGTCACAGCCGA 61.986 66.667 0.00 0.00 37.57 5.54
1698 1754 2.184167 CGCAAACACCCAGTTCGGT 61.184 57.895 0.00 0.00 40.26 4.69
1699 1755 1.720694 AACGCAAACACCCAGTTCGG 61.721 55.000 0.00 0.00 40.26 4.30
1700 1756 0.938713 TAACGCAAACACCCAGTTCG 59.061 50.000 0.00 0.00 40.26 3.95
1701 1757 2.351350 CCATAACGCAAACACCCAGTTC 60.351 50.000 0.00 0.00 40.26 3.01
1702 1758 1.611491 CCATAACGCAAACACCCAGTT 59.389 47.619 0.00 0.00 43.89 3.16
1703 1759 1.243902 CCATAACGCAAACACCCAGT 58.756 50.000 0.00 0.00 0.00 4.00
1704 1760 0.525761 CCCATAACGCAAACACCCAG 59.474 55.000 0.00 0.00 0.00 4.45
1705 1761 1.528292 GCCCATAACGCAAACACCCA 61.528 55.000 0.00 0.00 0.00 4.51
1706 1762 1.214325 GCCCATAACGCAAACACCC 59.786 57.895 0.00 0.00 0.00 4.61
1707 1763 0.109319 CAGCCCATAACGCAAACACC 60.109 55.000 0.00 0.00 0.00 4.16
1708 1764 0.732538 GCAGCCCATAACGCAAACAC 60.733 55.000 0.00 0.00 0.00 3.32
1709 1765 0.893270 AGCAGCCCATAACGCAAACA 60.893 50.000 0.00 0.00 0.00 2.83
1710 1766 1.091537 TAGCAGCCCATAACGCAAAC 58.908 50.000 0.00 0.00 0.00 2.93
1711 1767 1.470890 GTTAGCAGCCCATAACGCAAA 59.529 47.619 0.00 0.00 0.00 3.68
1712 1768 1.091537 GTTAGCAGCCCATAACGCAA 58.908 50.000 0.00 0.00 0.00 4.85
1713 1769 0.746563 GGTTAGCAGCCCATAACGCA 60.747 55.000 0.00 0.00 33.57 5.24
1714 1770 0.746563 TGGTTAGCAGCCCATAACGC 60.747 55.000 0.00 0.00 33.57 4.84
1715 1771 1.603802 CATGGTTAGCAGCCCATAACG 59.396 52.381 1.65 0.00 39.44 3.18
1716 1772 2.358898 CACATGGTTAGCAGCCCATAAC 59.641 50.000 0.00 0.00 39.44 1.89
1717 1773 2.025416 ACACATGGTTAGCAGCCCATAA 60.025 45.455 0.00 0.00 39.44 1.90
1718 1774 1.563879 ACACATGGTTAGCAGCCCATA 59.436 47.619 0.00 0.00 39.44 2.74
1719 1775 0.332632 ACACATGGTTAGCAGCCCAT 59.667 50.000 0.00 0.00 42.19 4.00
1720 1776 0.988063 TACACATGGTTAGCAGCCCA 59.012 50.000 0.00 0.00 34.66 5.36
1721 1777 1.065418 AGTACACATGGTTAGCAGCCC 60.065 52.381 0.00 0.00 0.00 5.19
1722 1778 2.009774 CAGTACACATGGTTAGCAGCC 58.990 52.381 0.00 0.00 0.00 4.85
1723 1779 2.009774 CCAGTACACATGGTTAGCAGC 58.990 52.381 0.00 0.00 32.85 5.25
1724 1780 2.009774 GCCAGTACACATGGTTAGCAG 58.990 52.381 0.00 0.00 40.17 4.24
1725 1781 1.349357 TGCCAGTACACATGGTTAGCA 59.651 47.619 0.00 0.00 40.17 3.49
1726 1782 2.107950 TGCCAGTACACATGGTTAGC 57.892 50.000 0.00 0.00 40.17 3.09
1727 1783 3.378112 CCATTGCCAGTACACATGGTTAG 59.622 47.826 0.00 0.00 40.17 2.34
1728 1784 3.351740 CCATTGCCAGTACACATGGTTA 58.648 45.455 0.00 0.00 40.17 2.85
1729 1785 2.170166 CCATTGCCAGTACACATGGTT 58.830 47.619 0.00 0.00 40.17 3.67
1730 1786 1.616725 CCCATTGCCAGTACACATGGT 60.617 52.381 0.00 0.00 40.17 3.55
1731 1787 1.105457 CCCATTGCCAGTACACATGG 58.895 55.000 0.00 0.00 41.04 3.66
1732 1788 0.457035 GCCCATTGCCAGTACACATG 59.543 55.000 0.00 0.00 0.00 3.21
1733 1789 0.039472 TGCCCATTGCCAGTACACAT 59.961 50.000 0.00 0.00 40.16 3.21
1734 1790 0.039472 ATGCCCATTGCCAGTACACA 59.961 50.000 0.00 0.00 40.16 3.72
1735 1791 2.051334 TATGCCCATTGCCAGTACAC 57.949 50.000 0.00 0.00 40.16 2.90
1736 1792 2.025416 ACTTATGCCCATTGCCAGTACA 60.025 45.455 0.00 0.00 40.16 2.90
1737 1793 2.654863 ACTTATGCCCATTGCCAGTAC 58.345 47.619 0.00 0.00 40.16 2.73
1738 1794 4.722526 ATACTTATGCCCATTGCCAGTA 57.277 40.909 0.00 0.00 40.16 2.74
1739 1795 3.600448 ATACTTATGCCCATTGCCAGT 57.400 42.857 0.00 0.00 40.16 4.00
1740 1796 4.655963 ACTATACTTATGCCCATTGCCAG 58.344 43.478 0.00 0.00 40.16 4.85
1741 1797 4.722526 ACTATACTTATGCCCATTGCCA 57.277 40.909 0.00 0.00 40.16 4.92
1772 1828 4.387598 CCTGCCCAACAAATCATCAAAAA 58.612 39.130 0.00 0.00 0.00 1.94
1773 1829 3.806507 GCCTGCCCAACAAATCATCAAAA 60.807 43.478 0.00 0.00 0.00 2.44
1774 1830 2.289569 GCCTGCCCAACAAATCATCAAA 60.290 45.455 0.00 0.00 0.00 2.69
1775 1831 1.275856 GCCTGCCCAACAAATCATCAA 59.724 47.619 0.00 0.00 0.00 2.57
1776 1832 0.896923 GCCTGCCCAACAAATCATCA 59.103 50.000 0.00 0.00 0.00 3.07
1777 1833 0.176449 GGCCTGCCCAACAAATCATC 59.824 55.000 0.00 0.00 0.00 2.92
1778 1834 0.544833 TGGCCTGCCCAACAAATCAT 60.545 50.000 3.32 0.00 41.82 2.45
1779 1835 1.152376 TGGCCTGCCCAACAAATCA 60.152 52.632 3.32 0.00 41.82 2.57
1780 1836 3.790223 TGGCCTGCCCAACAAATC 58.210 55.556 3.32 0.00 41.82 2.17
1800 1856 1.080569 CTCACGGGCAAAACCATGC 60.081 57.895 0.00 0.00 45.67 4.06
1801 1857 1.468520 CTACTCACGGGCAAAACCATG 59.531 52.381 0.00 0.00 42.05 3.66
1802 1858 1.821216 CTACTCACGGGCAAAACCAT 58.179 50.000 0.00 0.00 42.05 3.55
1803 1859 0.887387 GCTACTCACGGGCAAAACCA 60.887 55.000 0.00 0.00 42.05 3.67
1804 1860 0.605589 AGCTACTCACGGGCAAAACC 60.606 55.000 0.00 0.00 37.93 3.27
1805 1861 0.796927 GAGCTACTCACGGGCAAAAC 59.203 55.000 0.00 0.00 0.00 2.43
1806 1862 0.321298 GGAGCTACTCACGGGCAAAA 60.321 55.000 0.00 0.00 31.08 2.44
1807 1863 1.295423 GGAGCTACTCACGGGCAAA 59.705 57.895 0.00 0.00 31.08 3.68
1808 1864 2.978824 GGAGCTACTCACGGGCAA 59.021 61.111 0.00 0.00 31.08 4.52
1809 1865 3.449227 CGGAGCTACTCACGGGCA 61.449 66.667 0.00 0.00 31.08 5.36
1822 1878 1.144057 GATGTACCCACTGGCGGAG 59.856 63.158 0.00 0.00 33.59 4.63
1823 1879 2.363975 GGATGTACCCACTGGCGGA 61.364 63.158 0.00 0.00 33.59 5.54
1824 1880 2.189521 GGATGTACCCACTGGCGG 59.810 66.667 0.00 0.00 33.59 6.13
1833 1889 2.561569 CAACAAGATCCGGGATGTACC 58.438 52.381 15.70 0.00 38.08 3.34
1834 1890 1.940613 GCAACAAGATCCGGGATGTAC 59.059 52.381 15.70 0.00 0.00 2.90
1835 1891 1.134220 GGCAACAAGATCCGGGATGTA 60.134 52.381 15.70 0.00 0.00 2.29
1836 1892 0.394352 GGCAACAAGATCCGGGATGT 60.394 55.000 15.70 7.73 0.00 3.06
1837 1893 1.439353 CGGCAACAAGATCCGGGATG 61.439 60.000 15.70 4.22 39.52 3.51
1838 1894 1.153168 CGGCAACAAGATCCGGGAT 60.153 57.895 9.85 9.85 39.52 3.85
1839 1895 2.267642 CGGCAACAAGATCCGGGA 59.732 61.111 0.00 0.00 39.52 5.14
1842 1898 1.361668 CTCACCGGCAACAAGATCCG 61.362 60.000 0.00 0.00 42.58 4.18
1843 1899 1.648467 GCTCACCGGCAACAAGATCC 61.648 60.000 0.00 0.00 0.00 3.36
1844 1900 1.648467 GGCTCACCGGCAACAAGATC 61.648 60.000 0.00 0.00 38.25 2.75
1845 1901 1.675641 GGCTCACCGGCAACAAGAT 60.676 57.895 0.00 0.00 38.25 2.40
1846 1902 2.281484 GGCTCACCGGCAACAAGA 60.281 61.111 0.00 0.00 38.25 3.02
1847 1903 3.365265 GGGCTCACCGGCAACAAG 61.365 66.667 0.00 0.00 40.61 3.16
1848 1904 4.966787 GGGGCTCACCGGCAACAA 62.967 66.667 0.00 0.00 41.60 2.83
1854 1910 4.740822 CCAAAGGGGGCTCACCGG 62.741 72.222 0.00 0.00 41.60 5.28
1855 1911 3.646715 TCCAAAGGGGGCTCACCG 61.647 66.667 0.00 0.00 41.60 4.94
1856 1912 2.035783 GTCCAAAGGGGGCTCACC 59.964 66.667 0.00 0.00 38.65 4.02
1857 1913 0.967380 CATGTCCAAAGGGGGCTCAC 60.967 60.000 0.00 0.00 43.75 3.51
1858 1914 1.383799 CATGTCCAAAGGGGGCTCA 59.616 57.895 0.00 0.00 43.75 4.26
1859 1915 2.054453 GCATGTCCAAAGGGGGCTC 61.054 63.158 0.00 0.00 43.75 4.70
1860 1916 2.037847 GCATGTCCAAAGGGGGCT 59.962 61.111 0.00 0.00 43.75 5.19
1861 1917 1.679559 GATGCATGTCCAAAGGGGGC 61.680 60.000 2.46 0.00 43.63 5.80
1862 1918 1.044790 GGATGCATGTCCAAAGGGGG 61.045 60.000 2.46 0.00 38.20 5.40
1863 1919 1.044790 GGGATGCATGTCCAAAGGGG 61.045 60.000 2.46 0.00 40.17 4.79
1864 1920 0.032813 AGGGATGCATGTCCAAAGGG 60.033 55.000 2.46 0.00 40.17 3.95
1865 1921 1.108776 CAGGGATGCATGTCCAAAGG 58.891 55.000 2.46 0.00 40.17 3.11
1866 1922 0.458669 GCAGGGATGCATGTCCAAAG 59.541 55.000 2.46 1.58 40.17 2.77
1867 1923 0.971959 GGCAGGGATGCATGTCCAAA 60.972 55.000 2.46 0.00 40.17 3.28
1868 1924 1.380246 GGCAGGGATGCATGTCCAA 60.380 57.895 2.46 0.00 40.17 3.53
1869 1925 1.940242 ATGGCAGGGATGCATGTCCA 61.940 55.000 14.86 14.86 40.17 4.02
1870 1926 0.757935 AATGGCAGGGATGCATGTCC 60.758 55.000 2.46 5.66 37.56 4.02
1871 1927 1.610522 GTAATGGCAGGGATGCATGTC 59.389 52.381 2.46 0.00 36.33 3.06
1872 1928 1.696063 GTAATGGCAGGGATGCATGT 58.304 50.000 2.46 0.00 36.33 3.21
1873 1929 0.963962 GGTAATGGCAGGGATGCATG 59.036 55.000 2.46 0.00 36.33 4.06
1874 1930 0.538057 CGGTAATGGCAGGGATGCAT 60.538 55.000 0.00 0.00 36.33 3.96
1875 1931 1.152984 CGGTAATGGCAGGGATGCA 60.153 57.895 2.29 0.00 36.33 3.96
1876 1932 1.152963 ACGGTAATGGCAGGGATGC 60.153 57.895 0.00 0.00 0.00 3.91
1877 1933 0.880278 CGACGGTAATGGCAGGGATG 60.880 60.000 0.00 0.00 0.00 3.51
1878 1934 1.445942 CGACGGTAATGGCAGGGAT 59.554 57.895 0.00 0.00 0.00 3.85
1879 1935 2.897207 CGACGGTAATGGCAGGGA 59.103 61.111 0.00 0.00 0.00 4.20
1880 1936 2.895372 GCGACGGTAATGGCAGGG 60.895 66.667 0.00 0.00 0.00 4.45
1881 1937 2.869503 AAGGCGACGGTAATGGCAGG 62.870 60.000 0.00 0.00 0.00 4.85
1882 1938 1.429148 GAAGGCGACGGTAATGGCAG 61.429 60.000 0.00 0.00 0.00 4.85
1883 1939 1.448893 GAAGGCGACGGTAATGGCA 60.449 57.895 0.00 0.00 0.00 4.92
1884 1940 0.814010 ATGAAGGCGACGGTAATGGC 60.814 55.000 0.00 0.00 0.00 4.40
1885 1941 0.937304 CATGAAGGCGACGGTAATGG 59.063 55.000 0.00 0.00 0.00 3.16
1886 1942 0.937304 CCATGAAGGCGACGGTAATG 59.063 55.000 0.00 0.00 0.00 1.90
1887 1943 3.379650 CCATGAAGGCGACGGTAAT 57.620 52.632 0.00 0.00 0.00 1.89
1888 1944 4.924019 CCATGAAGGCGACGGTAA 57.076 55.556 0.00 0.00 0.00 2.85
1897 1953 1.228831 TTGGTGGTGGCCATGAAGG 60.229 57.895 9.72 0.00 38.48 3.46
1898 1954 0.827089 TGTTGGTGGTGGCCATGAAG 60.827 55.000 9.72 0.00 38.48 3.02
1899 1955 0.827089 CTGTTGGTGGTGGCCATGAA 60.827 55.000 9.72 0.00 38.48 2.57
1900 1956 1.228521 CTGTTGGTGGTGGCCATGA 60.229 57.895 9.72 0.00 38.48 3.07
1901 1957 2.934570 GCTGTTGGTGGTGGCCATG 61.935 63.158 9.72 0.00 38.48 3.66
1902 1958 2.601367 GCTGTTGGTGGTGGCCAT 60.601 61.111 9.72 0.00 38.48 4.40
1903 1959 4.134785 TGCTGTTGGTGGTGGCCA 62.135 61.111 0.00 0.00 36.62 5.36
1904 1960 3.297620 CTGCTGTTGGTGGTGGCC 61.298 66.667 0.00 0.00 0.00 5.36
1905 1961 2.127232 AACTGCTGTTGGTGGTGGC 61.127 57.895 8.32 0.00 34.71 5.01
1906 1962 4.258206 AACTGCTGTTGGTGGTGG 57.742 55.556 8.32 0.00 34.71 4.61
1928 1984 2.220615 TACCACGACACTGCCGATGG 62.221 60.000 0.00 0.00 35.71 3.51
1929 1985 0.179111 ATACCACGACACTGCCGATG 60.179 55.000 0.00 0.00 0.00 3.84
1930 1986 0.535335 AATACCACGACACTGCCGAT 59.465 50.000 0.00 0.00 0.00 4.18
1931 1987 0.108992 GAATACCACGACACTGCCGA 60.109 55.000 0.00 0.00 0.00 5.54
1932 1988 0.108804 AGAATACCACGACACTGCCG 60.109 55.000 0.00 0.00 0.00 5.69
1933 1989 3.834732 AGAATACCACGACACTGCC 57.165 52.632 0.00 0.00 0.00 4.85
2134 2190 0.693049 CCCTCACACTAAGCCCTTGT 59.307 55.000 0.00 0.00 0.00 3.16
2135 2191 0.693049 ACCCTCACACTAAGCCCTTG 59.307 55.000 0.00 0.00 0.00 3.61
2136 2192 2.337359 TACCCTCACACTAAGCCCTT 57.663 50.000 0.00 0.00 0.00 3.95
2137 2193 2.188817 CTTACCCTCACACTAAGCCCT 58.811 52.381 0.00 0.00 0.00 5.19
2138 2194 2.093606 GTCTTACCCTCACACTAAGCCC 60.094 54.545 0.00 0.00 0.00 5.19
2139 2195 2.832733 AGTCTTACCCTCACACTAAGCC 59.167 50.000 0.00 0.00 0.00 4.35
2140 2196 3.851098 CAGTCTTACCCTCACACTAAGC 58.149 50.000 0.00 0.00 0.00 3.09
2141 2197 3.511934 AGCAGTCTTACCCTCACACTAAG 59.488 47.826 0.00 0.00 0.00 2.18
2142 2198 3.258372 CAGCAGTCTTACCCTCACACTAA 59.742 47.826 0.00 0.00 0.00 2.24
2143 2199 2.826128 CAGCAGTCTTACCCTCACACTA 59.174 50.000 0.00 0.00 0.00 2.74
2144 2200 1.620819 CAGCAGTCTTACCCTCACACT 59.379 52.381 0.00 0.00 0.00 3.55
2145 2201 1.941668 GCAGCAGTCTTACCCTCACAC 60.942 57.143 0.00 0.00 0.00 3.82
2146 2202 0.321671 GCAGCAGTCTTACCCTCACA 59.678 55.000 0.00 0.00 0.00 3.58
2147 2203 0.610687 AGCAGCAGTCTTACCCTCAC 59.389 55.000 0.00 0.00 0.00 3.51
2148 2204 0.610174 CAGCAGCAGTCTTACCCTCA 59.390 55.000 0.00 0.00 0.00 3.86
2149 2205 0.898320 TCAGCAGCAGTCTTACCCTC 59.102 55.000 0.00 0.00 0.00 4.30
2150 2206 1.577736 ATCAGCAGCAGTCTTACCCT 58.422 50.000 0.00 0.00 0.00 4.34
2151 2207 2.224161 CCTATCAGCAGCAGTCTTACCC 60.224 54.545 0.00 0.00 0.00 3.69
2152 2208 2.695666 TCCTATCAGCAGCAGTCTTACC 59.304 50.000 0.00 0.00 0.00 2.85
2153 2209 3.798548 GCTCCTATCAGCAGCAGTCTTAC 60.799 52.174 0.00 0.00 39.43 2.34
2154 2210 2.363680 GCTCCTATCAGCAGCAGTCTTA 59.636 50.000 0.00 0.00 39.43 2.10
2155 2211 1.138661 GCTCCTATCAGCAGCAGTCTT 59.861 52.381 0.00 0.00 39.43 3.01
2156 2212 0.752054 GCTCCTATCAGCAGCAGTCT 59.248 55.000 0.00 0.00 39.43 3.24
2157 2213 0.597118 CGCTCCTATCAGCAGCAGTC 60.597 60.000 0.00 0.00 39.62 3.51
2158 2214 1.440893 CGCTCCTATCAGCAGCAGT 59.559 57.895 0.00 0.00 39.62 4.40
2159 2215 1.300775 CCGCTCCTATCAGCAGCAG 60.301 63.158 0.00 0.00 39.62 4.24
2160 2216 2.800541 CCCGCTCCTATCAGCAGCA 61.801 63.158 0.00 0.00 39.62 4.41
2161 2217 1.464376 TACCCGCTCCTATCAGCAGC 61.464 60.000 0.00 0.00 39.62 5.25
2162 2218 1.067283 CATACCCGCTCCTATCAGCAG 60.067 57.143 0.00 0.00 39.62 4.24
2163 2219 0.969149 CATACCCGCTCCTATCAGCA 59.031 55.000 0.00 0.00 39.62 4.41
2164 2220 0.390472 GCATACCCGCTCCTATCAGC 60.390 60.000 0.00 0.00 35.90 4.26
2165 2221 0.109086 CGCATACCCGCTCCTATCAG 60.109 60.000 0.00 0.00 0.00 2.90
2166 2222 0.538746 TCGCATACCCGCTCCTATCA 60.539 55.000 0.00 0.00 0.00 2.15
2167 2223 0.171455 CTCGCATACCCGCTCCTATC 59.829 60.000 0.00 0.00 0.00 2.08
2168 2224 0.539901 ACTCGCATACCCGCTCCTAT 60.540 55.000 0.00 0.00 0.00 2.57
2169 2225 0.109153 TACTCGCATACCCGCTCCTA 59.891 55.000 0.00 0.00 0.00 2.94
2170 2226 1.152819 TACTCGCATACCCGCTCCT 60.153 57.895 0.00 0.00 0.00 3.69
2171 2227 1.286260 CTACTCGCATACCCGCTCC 59.714 63.158 0.00 0.00 0.00 4.70
2172 2228 1.371881 GCTACTCGCATACCCGCTC 60.372 63.158 0.00 0.00 38.92 5.03
2173 2229 2.125326 TGCTACTCGCATACCCGCT 61.125 57.895 0.00 0.00 45.47 5.52
2174 2230 2.415843 TGCTACTCGCATACCCGC 59.584 61.111 0.00 0.00 45.47 6.13
2189 2245 1.076332 CTGGGTAAACTAGCGTGTGC 58.924 55.000 0.00 0.00 43.24 4.57
2190 2246 1.001633 ACCTGGGTAAACTAGCGTGTG 59.998 52.381 0.00 0.00 0.00 3.82
2191 2247 1.345063 ACCTGGGTAAACTAGCGTGT 58.655 50.000 0.00 0.00 0.00 4.49
2192 2248 2.344025 GAACCTGGGTAAACTAGCGTG 58.656 52.381 0.00 0.00 0.00 5.34
2193 2249 1.067354 CGAACCTGGGTAAACTAGCGT 60.067 52.381 0.00 0.00 0.00 5.07
2194 2250 1.636988 CGAACCTGGGTAAACTAGCG 58.363 55.000 0.00 0.00 0.00 4.26
2195 2251 1.551883 TCCGAACCTGGGTAAACTAGC 59.448 52.381 0.00 0.00 0.00 3.42
2196 2252 2.418334 GCTCCGAACCTGGGTAAACTAG 60.418 54.545 0.00 0.00 0.00 2.57
2197 2253 1.551883 GCTCCGAACCTGGGTAAACTA 59.448 52.381 0.00 0.00 0.00 2.24
2198 2254 0.323957 GCTCCGAACCTGGGTAAACT 59.676 55.000 0.00 0.00 0.00 2.66
2199 2255 0.323957 AGCTCCGAACCTGGGTAAAC 59.676 55.000 0.00 0.00 0.00 2.01
2200 2256 0.611714 GAGCTCCGAACCTGGGTAAA 59.388 55.000 0.87 0.00 0.00 2.01
2201 2257 0.252103 AGAGCTCCGAACCTGGGTAA 60.252 55.000 10.93 0.00 0.00 2.85
2202 2258 0.683504 GAGAGCTCCGAACCTGGGTA 60.684 60.000 10.93 0.00 0.00 3.69
2203 2259 1.985116 GAGAGCTCCGAACCTGGGT 60.985 63.158 10.93 0.00 0.00 4.51
2204 2260 2.726351 GGAGAGCTCCGAACCTGGG 61.726 68.421 10.93 0.00 40.36 4.45
2205 2261 2.896443 GGAGAGCTCCGAACCTGG 59.104 66.667 10.93 0.00 40.36 4.45
2219 2275 1.041437 GGGGTGTTATCTCTCCGGAG 58.959 60.000 26.32 26.32 40.73 4.63
2220 2276 0.635009 AGGGGTGTTATCTCTCCGGA 59.365 55.000 2.93 2.93 33.36 5.14
2221 2277 1.962100 GTAGGGGTGTTATCTCTCCGG 59.038 57.143 0.00 0.00 33.36 5.14
2222 2278 2.885894 GAGTAGGGGTGTTATCTCTCCG 59.114 54.545 0.00 0.00 33.36 4.63
2223 2279 3.117054 AGGAGTAGGGGTGTTATCTCTCC 60.117 52.174 0.00 0.00 40.04 3.71
2224 2280 3.892588 CAGGAGTAGGGGTGTTATCTCTC 59.107 52.174 0.00 0.00 0.00 3.20
2225 2281 3.917300 CAGGAGTAGGGGTGTTATCTCT 58.083 50.000 0.00 0.00 0.00 3.10
2226 2282 2.365941 GCAGGAGTAGGGGTGTTATCTC 59.634 54.545 0.00 0.00 0.00 2.75
2227 2283 2.292918 TGCAGGAGTAGGGGTGTTATCT 60.293 50.000 0.00 0.00 0.00 1.98
2228 2284 2.116238 TGCAGGAGTAGGGGTGTTATC 58.884 52.381 0.00 0.00 0.00 1.75
2229 2285 2.263895 TGCAGGAGTAGGGGTGTTAT 57.736 50.000 0.00 0.00 0.00 1.89
2230 2286 1.837439 CATGCAGGAGTAGGGGTGTTA 59.163 52.381 0.00 0.00 0.00 2.41
2231 2287 0.620556 CATGCAGGAGTAGGGGTGTT 59.379 55.000 0.00 0.00 0.00 3.32
2232 2288 0.547712 ACATGCAGGAGTAGGGGTGT 60.548 55.000 4.84 0.00 0.00 4.16
2233 2289 0.179000 GACATGCAGGAGTAGGGGTG 59.821 60.000 4.84 0.00 0.00 4.61
2234 2290 0.043334 AGACATGCAGGAGTAGGGGT 59.957 55.000 4.84 0.00 0.00 4.95
2235 2291 0.467384 CAGACATGCAGGAGTAGGGG 59.533 60.000 4.84 0.00 0.00 4.79
2236 2292 1.411977 CTCAGACATGCAGGAGTAGGG 59.588 57.143 4.84 0.00 0.00 3.53
2237 2293 2.106566 ACTCAGACATGCAGGAGTAGG 58.893 52.381 4.84 0.00 38.74 3.18
2238 2294 4.826733 AGATACTCAGACATGCAGGAGTAG 59.173 45.833 19.36 0.00 43.68 2.57
2239 2295 4.797743 AGATACTCAGACATGCAGGAGTA 58.202 43.478 17.84 17.84 44.32 2.59
2240 2296 3.641046 AGATACTCAGACATGCAGGAGT 58.359 45.455 4.84 15.35 42.76 3.85
2241 2297 5.981088 ATAGATACTCAGACATGCAGGAG 57.019 43.478 4.84 2.97 0.00 3.69
2242 2298 6.547402 ACTATAGATACTCAGACATGCAGGA 58.453 40.000 4.84 0.00 0.00 3.86
2243 2299 6.832520 ACTATAGATACTCAGACATGCAGG 57.167 41.667 6.78 0.00 0.00 4.85
2258 2314 9.581289 GCATCCTGTACCAGATATACTATAGAT 57.419 37.037 6.78 0.00 32.44 1.98
2259 2315 8.782927 AGCATCCTGTACCAGATATACTATAGA 58.217 37.037 6.78 0.00 32.44 1.98
2260 2316 8.988546 AGCATCCTGTACCAGATATACTATAG 57.011 38.462 0.00 0.00 32.44 1.31
2261 2317 9.409918 GAAGCATCCTGTACCAGATATACTATA 57.590 37.037 0.00 0.00 32.44 1.31
2262 2318 8.119246 AGAAGCATCCTGTACCAGATATACTAT 58.881 37.037 0.00 0.00 32.44 2.12
2263 2319 7.394641 CAGAAGCATCCTGTACCAGATATACTA 59.605 40.741 0.00 0.00 32.44 1.82
2264 2320 6.210385 CAGAAGCATCCTGTACCAGATATACT 59.790 42.308 0.00 0.00 32.44 2.12
2265 2321 6.393990 CAGAAGCATCCTGTACCAGATATAC 58.606 44.000 0.00 0.00 32.44 1.47
2266 2322 5.481824 CCAGAAGCATCCTGTACCAGATATA 59.518 44.000 0.00 0.00 32.44 0.86
2267 2323 4.285517 CCAGAAGCATCCTGTACCAGATAT 59.714 45.833 0.00 0.00 32.44 1.63
2268 2324 3.643320 CCAGAAGCATCCTGTACCAGATA 59.357 47.826 0.00 0.00 32.44 1.98
2269 2325 2.437281 CCAGAAGCATCCTGTACCAGAT 59.563 50.000 0.00 0.00 32.44 2.90
2270 2326 1.833630 CCAGAAGCATCCTGTACCAGA 59.166 52.381 0.00 0.00 32.44 3.86
2271 2327 2.322355 CCAGAAGCATCCTGTACCAG 57.678 55.000 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.