Multiple sequence alignment - TraesCS7D01G452200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G452200 chr7D 100.000 5365 0 0 1 5365 571886421 571881057 0.000000e+00 9908.0
1 TraesCS7D01G452200 chr7A 94.005 2502 148 2 1951 4450 661168105 661165604 0.000000e+00 3788.0
2 TraesCS7D01G452200 chr7A 80.791 2275 387 34 2149 4410 732506015 732508252 0.000000e+00 1735.0
3 TraesCS7D01G452200 chr7A 90.193 1142 74 16 749 1871 661169548 661168426 0.000000e+00 1454.0
4 TraesCS7D01G452200 chr7A 85.480 854 84 19 4518 5365 661165427 661164608 0.000000e+00 854.0
5 TraesCS7D01G452200 chr7A 79.376 834 146 20 997 1814 732505042 732505865 1.010000e-156 564.0
6 TraesCS7D01G452200 chr7B 93.915 2498 142 3 1950 4445 628468429 628465940 0.000000e+00 3762.0
7 TraesCS7D01G452200 chr7B 89.420 1380 91 25 520 1871 628470100 628468748 0.000000e+00 1688.0
8 TraesCS7D01G452200 chr7B 88.525 854 82 7 4518 5365 628465758 628464915 0.000000e+00 1020.0
9 TraesCS7D01G452200 chr6B 80.527 2203 381 41 2264 4448 25815662 25813490 0.000000e+00 1648.0
10 TraesCS7D01G452200 chr6B 81.354 2038 359 16 2260 4291 8345074 8343052 0.000000e+00 1639.0
11 TraesCS7D01G452200 chr6B 81.305 2038 360 16 2260 4291 8354720 8352698 0.000000e+00 1633.0
12 TraesCS7D01G452200 chr6B 81.305 2038 360 16 2260 4291 8364366 8362344 0.000000e+00 1633.0
13 TraesCS7D01G452200 chr6B 82.859 1301 207 11 2260 3555 8334993 8333704 0.000000e+00 1153.0
14 TraesCS7D01G452200 chr6B 82.859 1301 207 11 2260 3555 8373915 8372626 0.000000e+00 1153.0
15 TraesCS7D01G452200 chrUn 81.305 2038 360 16 2260 4291 343350493 343348471 0.000000e+00 1633.0
16 TraesCS7D01G452200 chr3A 79.918 2186 394 37 2260 4425 8573404 8575564 0.000000e+00 1563.0
17 TraesCS7D01G452200 chr4A 95.652 69 3 0 1 69 626050330 626050262 1.580000e-20 111.0
18 TraesCS7D01G452200 chr6D 97.297 37 1 0 1204 1240 456417946 456417982 4.490000e-06 63.9
19 TraesCS7D01G452200 chr5B 100.000 29 0 0 36 64 194191718 194191690 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G452200 chr7D 571881057 571886421 5364 True 9908.000000 9908 100.000000 1 5365 1 chr7D.!!$R1 5364
1 TraesCS7D01G452200 chr7A 661164608 661169548 4940 True 2032.000000 3788 89.892667 749 5365 3 chr7A.!!$R1 4616
2 TraesCS7D01G452200 chr7A 732505042 732508252 3210 False 1149.500000 1735 80.083500 997 4410 2 chr7A.!!$F1 3413
3 TraesCS7D01G452200 chr7B 628464915 628470100 5185 True 2156.666667 3762 90.620000 520 5365 3 chr7B.!!$R1 4845
4 TraesCS7D01G452200 chr6B 25813490 25815662 2172 True 1648.000000 1648 80.527000 2264 4448 1 chr6B.!!$R6 2184
5 TraesCS7D01G452200 chr6B 8343052 8345074 2022 True 1639.000000 1639 81.354000 2260 4291 1 chr6B.!!$R2 2031
6 TraesCS7D01G452200 chr6B 8352698 8354720 2022 True 1633.000000 1633 81.305000 2260 4291 1 chr6B.!!$R3 2031
7 TraesCS7D01G452200 chr6B 8362344 8364366 2022 True 1633.000000 1633 81.305000 2260 4291 1 chr6B.!!$R4 2031
8 TraesCS7D01G452200 chr6B 8333704 8334993 1289 True 1153.000000 1153 82.859000 2260 3555 1 chr6B.!!$R1 1295
9 TraesCS7D01G452200 chr6B 8372626 8373915 1289 True 1153.000000 1153 82.859000 2260 3555 1 chr6B.!!$R5 1295
10 TraesCS7D01G452200 chrUn 343348471 343350493 2022 True 1633.000000 1633 81.305000 2260 4291 1 chrUn.!!$R1 2031
11 TraesCS7D01G452200 chr3A 8573404 8575564 2160 False 1563.000000 1563 79.918000 2260 4425 1 chr3A.!!$F1 2165

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
487 488 0.031994 ACATTTGAAGTGCAACGCCC 59.968 50.0 0.00 0.0 45.86 6.13 F
601 602 0.104120 TGAAGATGACCGCCGTATGG 59.896 55.0 0.00 0.0 38.77 2.74 F
602 603 0.104304 GAAGATGACCGCCGTATGGT 59.896 55.0 2.17 0.0 44.10 3.55 F
2414 2743 0.253044 AGGCATGCTGTGGTTATCGT 59.747 50.0 18.92 0.0 0.00 3.73 F
3998 4345 0.674895 GTCTCGCTTTCATGGCAGGT 60.675 55.0 0.00 0.0 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2295 2621 1.676916 CCACACTGATGTAGCCCACAG 60.677 57.143 0.00 0.0 41.51 3.66 R
2506 2838 5.119588 TGAGGTAAAATGTGATCGAAACGTC 59.880 40.000 0.00 0.0 0.00 4.34 R
2702 3046 4.202274 TGTGGAAGACAATCGAACCTAACA 60.202 41.667 0.00 0.0 0.00 2.41 R
4135 4482 0.473755 TTCAGCAGCCCTTCTGTCAA 59.526 50.000 0.00 0.0 44.66 3.18 R
5046 5505 1.468224 GCAAGAGAGAACGCGATGAGA 60.468 52.381 15.93 0.0 0.00 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.760035 CCCTCCAGACCGGACGTG 61.760 72.222 9.46 1.32 39.64 4.49
18 19 4.436998 CCTCCAGACCGGACGTGC 62.437 72.222 9.46 0.00 39.64 5.34
19 20 4.778415 CTCCAGACCGGACGTGCG 62.778 72.222 23.45 23.45 39.64 5.34
37 38 4.432741 GGCAACCTCCTCCCCTGC 62.433 72.222 0.00 0.00 0.00 4.85
38 39 4.432741 GCAACCTCCTCCCCTGCC 62.433 72.222 0.00 0.00 0.00 4.85
39 40 2.935481 CAACCTCCTCCCCTGCCA 60.935 66.667 0.00 0.00 0.00 4.92
40 41 2.936032 AACCTCCTCCCCTGCCAC 60.936 66.667 0.00 0.00 0.00 5.01
41 42 3.810687 AACCTCCTCCCCTGCCACA 62.811 63.158 0.00 0.00 0.00 4.17
42 43 3.721706 CCTCCTCCCCTGCCACAC 61.722 72.222 0.00 0.00 0.00 3.82
43 44 4.087892 CTCCTCCCCTGCCACACG 62.088 72.222 0.00 0.00 0.00 4.49
44 45 4.954118 TCCTCCCCTGCCACACGT 62.954 66.667 0.00 0.00 0.00 4.49
45 46 4.704833 CCTCCCCTGCCACACGTG 62.705 72.222 15.48 15.48 0.00 4.49
46 47 3.941188 CTCCCCTGCCACACGTGT 61.941 66.667 17.22 17.22 0.00 4.49
47 48 4.248842 TCCCCTGCCACACGTGTG 62.249 66.667 36.13 36.13 45.23 3.82
57 58 1.507562 CACACGTGTGGCAGTTATCA 58.492 50.000 35.65 0.00 42.10 2.15
58 59 1.460743 CACACGTGTGGCAGTTATCAG 59.539 52.381 35.65 10.09 42.10 2.90
59 60 1.078709 CACGTGTGGCAGTTATCAGG 58.921 55.000 7.58 0.00 0.00 3.86
60 61 0.973632 ACGTGTGGCAGTTATCAGGA 59.026 50.000 0.00 0.00 0.00 3.86
61 62 1.337823 ACGTGTGGCAGTTATCAGGAC 60.338 52.381 0.00 0.00 0.00 3.85
62 63 1.739067 GTGTGGCAGTTATCAGGACC 58.261 55.000 0.00 0.00 0.00 4.46
63 64 0.618458 TGTGGCAGTTATCAGGACCC 59.382 55.000 0.00 0.00 0.00 4.46
64 65 0.618458 GTGGCAGTTATCAGGACCCA 59.382 55.000 0.00 0.00 0.00 4.51
65 66 1.004277 GTGGCAGTTATCAGGACCCAA 59.996 52.381 0.00 0.00 0.00 4.12
66 67 1.281867 TGGCAGTTATCAGGACCCAAG 59.718 52.381 0.00 0.00 0.00 3.61
67 68 1.559682 GGCAGTTATCAGGACCCAAGA 59.440 52.381 0.00 0.00 0.00 3.02
68 69 2.173569 GGCAGTTATCAGGACCCAAGAT 59.826 50.000 0.00 0.00 0.00 2.40
69 70 3.372025 GGCAGTTATCAGGACCCAAGATT 60.372 47.826 0.00 0.00 0.00 2.40
70 71 4.273318 GCAGTTATCAGGACCCAAGATTT 58.727 43.478 0.00 0.00 0.00 2.17
71 72 5.437060 GCAGTTATCAGGACCCAAGATTTA 58.563 41.667 0.00 0.00 0.00 1.40
72 73 5.885912 GCAGTTATCAGGACCCAAGATTTAA 59.114 40.000 0.00 0.00 0.00 1.52
73 74 6.547510 GCAGTTATCAGGACCCAAGATTTAAT 59.452 38.462 0.00 0.00 0.00 1.40
74 75 7.719633 GCAGTTATCAGGACCCAAGATTTAATA 59.280 37.037 0.00 0.00 0.00 0.98
75 76 9.799106 CAGTTATCAGGACCCAAGATTTAATAT 57.201 33.333 0.00 0.00 0.00 1.28
108 109 4.573201 ACCAACCGGTTTGATTCATATACG 59.427 41.667 24.11 5.51 46.31 3.06
109 110 4.024387 CCAACCGGTTTGATTCATATACGG 60.024 45.833 19.55 7.12 45.06 4.02
111 112 4.725556 CCGGTTTGATTCATATACGGTG 57.274 45.455 11.97 0.00 35.67 4.94
112 113 3.059188 CCGGTTTGATTCATATACGGTGC 60.059 47.826 11.97 0.00 35.67 5.01
113 114 3.807622 CGGTTTGATTCATATACGGTGCT 59.192 43.478 0.00 0.00 0.00 4.40
114 115 4.986034 CGGTTTGATTCATATACGGTGCTA 59.014 41.667 0.00 0.00 0.00 3.49
115 116 5.118664 CGGTTTGATTCATATACGGTGCTAG 59.881 44.000 0.00 0.00 0.00 3.42
116 117 5.107065 GGTTTGATTCATATACGGTGCTAGC 60.107 44.000 8.10 8.10 0.00 3.42
117 118 4.864704 TGATTCATATACGGTGCTAGCA 57.135 40.909 14.93 14.93 0.00 3.49
118 119 5.405935 TGATTCATATACGGTGCTAGCAT 57.594 39.130 22.51 7.71 0.00 3.79
119 120 6.524101 TGATTCATATACGGTGCTAGCATA 57.476 37.500 22.51 9.98 0.00 3.14
120 121 6.330278 TGATTCATATACGGTGCTAGCATAC 58.670 40.000 22.51 15.90 0.00 2.39
121 122 5.715434 TTCATATACGGTGCTAGCATACA 57.285 39.130 22.51 7.20 0.00 2.29
122 123 5.715434 TCATATACGGTGCTAGCATACAA 57.285 39.130 22.51 7.95 0.00 2.41
123 124 5.466819 TCATATACGGTGCTAGCATACAAC 58.533 41.667 22.51 7.25 0.00 3.32
124 125 3.812156 ATACGGTGCTAGCATACAACA 57.188 42.857 22.51 4.96 0.00 3.33
125 126 2.465860 ACGGTGCTAGCATACAACAA 57.534 45.000 22.51 0.00 0.00 2.83
126 127 2.073816 ACGGTGCTAGCATACAACAAC 58.926 47.619 22.51 4.83 0.00 3.32
127 128 1.396996 CGGTGCTAGCATACAACAACC 59.603 52.381 22.51 13.41 0.00 3.77
128 129 2.711542 GGTGCTAGCATACAACAACCT 58.288 47.619 22.51 0.00 0.00 3.50
129 130 2.678336 GGTGCTAGCATACAACAACCTC 59.322 50.000 22.51 2.67 0.00 3.85
130 131 3.334691 GTGCTAGCATACAACAACCTCA 58.665 45.455 22.51 0.00 0.00 3.86
131 132 3.751175 GTGCTAGCATACAACAACCTCAA 59.249 43.478 22.51 0.00 0.00 3.02
132 133 4.396166 GTGCTAGCATACAACAACCTCAAT 59.604 41.667 22.51 0.00 0.00 2.57
133 134 5.009631 TGCTAGCATACAACAACCTCAATT 58.990 37.500 14.93 0.00 0.00 2.32
134 135 5.106197 TGCTAGCATACAACAACCTCAATTG 60.106 40.000 14.93 0.00 35.59 2.32
135 136 5.123820 GCTAGCATACAACAACCTCAATTGA 59.876 40.000 10.63 8.12 33.57 2.57
136 137 5.376854 AGCATACAACAACCTCAATTGAC 57.623 39.130 3.38 0.00 33.57 3.18
137 138 4.826733 AGCATACAACAACCTCAATTGACA 59.173 37.500 3.38 0.00 33.57 3.58
138 139 5.301551 AGCATACAACAACCTCAATTGACAA 59.698 36.000 3.38 0.00 33.57 3.18
139 140 5.982516 GCATACAACAACCTCAATTGACAAA 59.017 36.000 3.38 0.00 33.57 2.83
140 141 6.478344 GCATACAACAACCTCAATTGACAAAA 59.522 34.615 3.38 0.00 33.57 2.44
141 142 7.171337 GCATACAACAACCTCAATTGACAAAAT 59.829 33.333 3.38 0.00 33.57 1.82
142 143 8.702438 CATACAACAACCTCAATTGACAAAATC 58.298 33.333 3.38 0.00 33.57 2.17
143 144 6.877236 ACAACAACCTCAATTGACAAAATCT 58.123 32.000 3.38 0.00 33.57 2.40
144 145 8.006298 ACAACAACCTCAATTGACAAAATCTA 57.994 30.769 3.38 0.00 33.57 1.98
145 146 8.137437 ACAACAACCTCAATTGACAAAATCTAG 58.863 33.333 3.38 0.00 33.57 2.43
146 147 8.352201 CAACAACCTCAATTGACAAAATCTAGA 58.648 33.333 3.38 0.00 33.57 2.43
147 148 8.463930 ACAACCTCAATTGACAAAATCTAGAA 57.536 30.769 3.38 0.00 33.57 2.10
148 149 8.571336 ACAACCTCAATTGACAAAATCTAGAAG 58.429 33.333 3.38 0.00 33.57 2.85
149 150 7.150783 ACCTCAATTGACAAAATCTAGAAGC 57.849 36.000 3.38 0.00 0.00 3.86
150 151 6.716628 ACCTCAATTGACAAAATCTAGAAGCA 59.283 34.615 3.38 0.00 0.00 3.91
151 152 7.025963 CCTCAATTGACAAAATCTAGAAGCAC 58.974 38.462 3.38 0.00 0.00 4.40
152 153 7.308770 CCTCAATTGACAAAATCTAGAAGCACA 60.309 37.037 3.38 0.00 0.00 4.57
153 154 7.939782 TCAATTGACAAAATCTAGAAGCACAA 58.060 30.769 3.38 0.11 0.00 3.33
154 155 8.579006 TCAATTGACAAAATCTAGAAGCACAAT 58.421 29.630 3.38 2.46 0.00 2.71
155 156 9.199982 CAATTGACAAAATCTAGAAGCACAATT 57.800 29.630 0.00 8.04 35.57 2.32
156 157 8.976986 ATTGACAAAATCTAGAAGCACAATTC 57.023 30.769 0.00 0.00 0.00 2.17
157 158 7.750229 TGACAAAATCTAGAAGCACAATTCT 57.250 32.000 0.00 0.00 42.20 2.40
158 159 8.846943 TGACAAAATCTAGAAGCACAATTCTA 57.153 30.769 0.00 0.00 40.08 2.10
159 160 8.721478 TGACAAAATCTAGAAGCACAATTCTAC 58.279 33.333 0.00 0.00 40.08 2.59
160 161 7.743104 ACAAAATCTAGAAGCACAATTCTACG 58.257 34.615 0.00 0.00 40.08 3.51
161 162 7.387948 ACAAAATCTAGAAGCACAATTCTACGT 59.612 33.333 0.00 0.00 40.08 3.57
162 163 6.893958 AATCTAGAAGCACAATTCTACGTG 57.106 37.500 0.00 0.00 40.08 4.49
163 164 5.386958 TCTAGAAGCACAATTCTACGTGT 57.613 39.130 0.00 0.00 40.08 4.49
164 165 5.161358 TCTAGAAGCACAATTCTACGTGTG 58.839 41.667 0.00 0.00 46.40 3.82
165 166 3.067106 AGAAGCACAATTCTACGTGTGG 58.933 45.455 0.00 0.00 44.32 4.17
166 167 1.156736 AGCACAATTCTACGTGTGGC 58.843 50.000 0.00 0.00 44.32 5.01
167 168 0.168128 GCACAATTCTACGTGTGGCC 59.832 55.000 0.00 0.00 44.32 5.36
168 169 1.808411 CACAATTCTACGTGTGGCCT 58.192 50.000 3.32 0.00 41.19 5.19
169 170 1.464608 CACAATTCTACGTGTGGCCTG 59.535 52.381 3.32 0.00 41.19 4.85
170 171 0.447801 CAATTCTACGTGTGGCCTGC 59.552 55.000 3.32 0.00 0.00 4.85
171 172 0.676782 AATTCTACGTGTGGCCTGCC 60.677 55.000 3.32 0.00 0.00 4.85
172 173 1.553690 ATTCTACGTGTGGCCTGCCT 61.554 55.000 9.97 0.00 36.94 4.75
173 174 2.434884 CTACGTGTGGCCTGCCTG 60.435 66.667 9.97 0.00 36.94 4.85
174 175 2.920384 TACGTGTGGCCTGCCTGA 60.920 61.111 9.97 0.00 36.94 3.86
175 176 2.244117 CTACGTGTGGCCTGCCTGAT 62.244 60.000 9.97 0.00 36.94 2.90
176 177 2.238847 TACGTGTGGCCTGCCTGATC 62.239 60.000 9.97 0.00 36.94 2.92
177 178 2.352422 GTGTGGCCTGCCTGATCA 59.648 61.111 9.97 0.00 36.94 2.92
178 179 1.303561 GTGTGGCCTGCCTGATCAA 60.304 57.895 9.97 0.00 36.94 2.57
179 180 0.895100 GTGTGGCCTGCCTGATCAAA 60.895 55.000 9.97 0.00 36.94 2.69
180 181 0.178967 TGTGGCCTGCCTGATCAAAA 60.179 50.000 9.97 0.00 36.94 2.44
181 182 1.188863 GTGGCCTGCCTGATCAAAAT 58.811 50.000 9.97 0.00 36.94 1.82
182 183 1.134907 GTGGCCTGCCTGATCAAAATG 60.135 52.381 9.97 0.00 36.94 2.32
183 184 0.462789 GGCCTGCCTGATCAAAATGG 59.537 55.000 0.00 0.00 0.00 3.16
184 185 1.188863 GCCTGCCTGATCAAAATGGT 58.811 50.000 0.00 0.00 0.00 3.55
185 186 1.135721 GCCTGCCTGATCAAAATGGTC 59.864 52.381 0.00 0.00 0.00 4.02
186 187 2.731572 CCTGCCTGATCAAAATGGTCT 58.268 47.619 0.00 0.00 0.00 3.85
187 188 3.889815 CCTGCCTGATCAAAATGGTCTA 58.110 45.455 0.00 0.00 0.00 2.59
188 189 4.272489 CCTGCCTGATCAAAATGGTCTAA 58.728 43.478 0.00 0.00 0.00 2.10
189 190 4.706476 CCTGCCTGATCAAAATGGTCTAAA 59.294 41.667 0.00 0.00 0.00 1.85
190 191 5.185635 CCTGCCTGATCAAAATGGTCTAAAA 59.814 40.000 0.00 0.00 0.00 1.52
191 192 6.024552 TGCCTGATCAAAATGGTCTAAAAC 57.975 37.500 0.00 0.00 0.00 2.43
192 193 5.538053 TGCCTGATCAAAATGGTCTAAAACA 59.462 36.000 0.00 0.00 0.00 2.83
193 194 6.041409 TGCCTGATCAAAATGGTCTAAAACAA 59.959 34.615 0.00 0.00 0.00 2.83
194 195 7.099120 GCCTGATCAAAATGGTCTAAAACAAT 58.901 34.615 0.00 0.00 0.00 2.71
195 196 8.250332 GCCTGATCAAAATGGTCTAAAACAATA 58.750 33.333 0.00 0.00 0.00 1.90
198 199 9.638239 TGATCAAAATGGTCTAAAACAATAAGC 57.362 29.630 0.00 0.00 0.00 3.09
199 200 9.638239 GATCAAAATGGTCTAAAACAATAAGCA 57.362 29.630 0.00 0.00 0.00 3.91
207 208 9.407380 TGGTCTAAAACAATAAGCATATGATGT 57.593 29.630 6.97 0.12 0.00 3.06
208 209 9.884465 GGTCTAAAACAATAAGCATATGATGTC 57.116 33.333 6.97 0.00 0.00 3.06
213 214 9.524106 AAAACAATAAGCATATGATGTCACATG 57.476 29.630 6.97 0.00 34.09 3.21
214 215 8.454570 AACAATAAGCATATGATGTCACATGA 57.545 30.769 6.97 0.00 32.78 3.07
215 216 8.454570 ACAATAAGCATATGATGTCACATGAA 57.545 30.769 6.97 0.00 32.78 2.57
216 217 9.074576 ACAATAAGCATATGATGTCACATGAAT 57.925 29.630 6.97 0.00 32.78 2.57
220 221 8.857694 AAGCATATGATGTCACATGAATATGA 57.142 30.769 23.07 0.00 32.78 2.15
221 222 8.265165 AGCATATGATGTCACATGAATATGAC 57.735 34.615 23.07 16.96 44.56 3.06
222 223 7.336176 AGCATATGATGTCACATGAATATGACC 59.664 37.037 23.07 12.71 43.84 4.02
223 224 7.120138 GCATATGATGTCACATGAATATGACCA 59.880 37.037 23.07 4.07 43.84 4.02
224 225 9.005777 CATATGATGTCACATGAATATGACCAA 57.994 33.333 17.89 0.00 43.84 3.67
225 226 7.885009 ATGATGTCACATGAATATGACCAAA 57.115 32.000 0.00 0.00 43.84 3.28
226 227 7.700022 TGATGTCACATGAATATGACCAAAA 57.300 32.000 0.00 0.00 43.84 2.44
227 228 8.296211 TGATGTCACATGAATATGACCAAAAT 57.704 30.769 0.00 0.00 43.84 1.82
228 229 9.406113 TGATGTCACATGAATATGACCAAAATA 57.594 29.630 0.00 0.00 43.84 1.40
231 232 9.187996 TGTCACATGAATATGACCAAAATATGT 57.812 29.630 10.65 0.00 43.84 2.29
232 233 9.669353 GTCACATGAATATGACCAAAATATGTC 57.331 33.333 0.00 0.00 39.49 3.06
233 234 9.631257 TCACATGAATATGACCAAAATATGTCT 57.369 29.630 0.00 0.00 37.73 3.41
243 244 8.893219 TGACCAAAATATGTCTTATCTAGCTG 57.107 34.615 0.00 0.00 32.67 4.24
244 245 8.704668 TGACCAAAATATGTCTTATCTAGCTGA 58.295 33.333 0.00 0.00 32.67 4.26
245 246 9.717942 GACCAAAATATGTCTTATCTAGCTGAT 57.282 33.333 0.00 0.00 39.11 2.90
255 256 9.415008 TGTCTTATCTAGCTGATTTCTAGAACT 57.585 33.333 4.18 0.00 43.81 3.01
256 257 9.893305 GTCTTATCTAGCTGATTTCTAGAACTC 57.107 37.037 14.28 14.28 43.81 3.01
257 258 9.073475 TCTTATCTAGCTGATTTCTAGAACTCC 57.927 37.037 17.43 5.87 43.81 3.85
258 259 6.664428 ATCTAGCTGATTTCTAGAACTCCC 57.336 41.667 17.43 10.17 43.81 4.30
259 260 5.772004 TCTAGCTGATTTCTAGAACTCCCT 58.228 41.667 17.43 15.35 39.46 4.20
260 261 6.912426 TCTAGCTGATTTCTAGAACTCCCTA 58.088 40.000 17.43 15.58 39.46 3.53
261 262 7.531317 TCTAGCTGATTTCTAGAACTCCCTAT 58.469 38.462 17.43 3.00 39.46 2.57
262 263 8.670490 TCTAGCTGATTTCTAGAACTCCCTATA 58.330 37.037 17.43 9.54 39.46 1.31
263 264 9.474313 CTAGCTGATTTCTAGAACTCCCTATAT 57.526 37.037 17.43 1.65 36.50 0.86
316 317 3.099524 GTCACTCAGACTCAGCACG 57.900 57.895 0.00 0.00 44.09 5.34
317 318 1.006314 GTCACTCAGACTCAGCACGC 61.006 60.000 0.00 0.00 44.09 5.34
318 319 1.175347 TCACTCAGACTCAGCACGCT 61.175 55.000 0.00 0.00 0.00 5.07
319 320 1.007848 CACTCAGACTCAGCACGCTG 61.008 60.000 12.91 12.91 44.86 5.18
333 334 6.512297 TCAGCACGCTGATTAGTATTATTCA 58.488 36.000 17.54 0.00 46.80 2.57
334 335 6.420903 TCAGCACGCTGATTAGTATTATTCAC 59.579 38.462 17.54 0.00 46.80 3.18
335 336 6.422100 CAGCACGCTGATTAGTATTATTCACT 59.578 38.462 13.87 0.00 46.30 3.41
336 337 6.642950 AGCACGCTGATTAGTATTATTCACTC 59.357 38.462 0.00 0.00 0.00 3.51
337 338 6.642950 GCACGCTGATTAGTATTATTCACTCT 59.357 38.462 0.00 0.00 0.00 3.24
338 339 7.148885 GCACGCTGATTAGTATTATTCACTCTC 60.149 40.741 0.00 0.00 0.00 3.20
339 340 8.079203 CACGCTGATTAGTATTATTCACTCTCT 58.921 37.037 0.00 0.00 0.00 3.10
340 341 8.293867 ACGCTGATTAGTATTATTCACTCTCTC 58.706 37.037 0.00 0.00 0.00 3.20
341 342 8.511321 CGCTGATTAGTATTATTCACTCTCTCT 58.489 37.037 0.00 0.00 0.00 3.10
353 354 6.992063 TTCACTCTCTCTATCAAATTTGGC 57.008 37.500 17.90 0.00 0.00 4.52
354 355 5.431765 TCACTCTCTCTATCAAATTTGGCC 58.568 41.667 17.90 0.00 0.00 5.36
355 356 5.045651 TCACTCTCTCTATCAAATTTGGCCA 60.046 40.000 17.90 0.00 0.00 5.36
356 357 5.649395 CACTCTCTCTATCAAATTTGGCCAA 59.351 40.000 16.05 16.05 0.00 4.52
357 358 6.151648 CACTCTCTCTATCAAATTTGGCCAAA 59.848 38.462 32.12 32.12 34.46 3.28
358 359 6.151817 ACTCTCTCTATCAAATTTGGCCAAAC 59.848 38.462 32.62 0.00 32.51 2.93
359 360 6.248433 TCTCTCTATCAAATTTGGCCAAACT 58.752 36.000 32.62 20.81 32.51 2.66
360 361 7.402054 TCTCTCTATCAAATTTGGCCAAACTA 58.598 34.615 32.62 17.91 32.51 2.24
361 362 8.055181 TCTCTCTATCAAATTTGGCCAAACTAT 58.945 33.333 32.62 22.71 32.51 2.12
362 363 7.999679 TCTCTATCAAATTTGGCCAAACTATG 58.000 34.615 32.62 27.30 32.51 2.23
379 380 7.861630 CAAACTATGGACTCCATTATTAACGG 58.138 38.462 16.03 0.70 42.23 4.44
380 381 6.989155 ACTATGGACTCCATTATTAACGGA 57.011 37.500 16.03 0.00 42.23 4.69
381 382 7.554959 ACTATGGACTCCATTATTAACGGAT 57.445 36.000 16.03 0.00 42.23 4.18
382 383 7.612677 ACTATGGACTCCATTATTAACGGATC 58.387 38.462 16.03 0.00 42.23 3.36
383 384 6.688073 ATGGACTCCATTATTAACGGATCT 57.312 37.500 4.55 0.00 42.23 2.75
384 385 6.494666 TGGACTCCATTATTAACGGATCTT 57.505 37.500 0.00 0.00 0.00 2.40
385 386 6.288294 TGGACTCCATTATTAACGGATCTTG 58.712 40.000 0.00 0.00 0.00 3.02
386 387 6.099125 TGGACTCCATTATTAACGGATCTTGA 59.901 38.462 0.00 0.00 0.00 3.02
387 388 6.424207 GGACTCCATTATTAACGGATCTTGAC 59.576 42.308 0.00 0.00 0.00 3.18
388 389 6.884832 ACTCCATTATTAACGGATCTTGACA 58.115 36.000 0.00 0.00 0.00 3.58
389 390 6.761714 ACTCCATTATTAACGGATCTTGACAC 59.238 38.462 0.00 0.00 0.00 3.67
390 391 6.053005 TCCATTATTAACGGATCTTGACACC 58.947 40.000 0.00 0.00 0.00 4.16
391 392 6.055588 CCATTATTAACGGATCTTGACACCT 58.944 40.000 0.00 0.00 0.00 4.00
392 393 6.202954 CCATTATTAACGGATCTTGACACCTC 59.797 42.308 0.00 0.00 0.00 3.85
393 394 2.933495 TAACGGATCTTGACACCTCG 57.067 50.000 0.00 0.00 0.00 4.63
394 395 1.254026 AACGGATCTTGACACCTCGA 58.746 50.000 0.00 0.00 0.00 4.04
395 396 1.475403 ACGGATCTTGACACCTCGAT 58.525 50.000 0.00 0.00 0.00 3.59
396 397 1.405821 ACGGATCTTGACACCTCGATC 59.594 52.381 0.00 0.00 33.31 3.69
397 398 1.405463 CGGATCTTGACACCTCGATCA 59.595 52.381 0.00 0.00 35.22 2.92
398 399 2.159240 CGGATCTTGACACCTCGATCAA 60.159 50.000 0.00 0.00 35.22 2.57
399 400 3.491619 CGGATCTTGACACCTCGATCAAT 60.492 47.826 0.00 0.00 34.43 2.57
400 401 4.446371 GGATCTTGACACCTCGATCAATT 58.554 43.478 0.00 0.00 34.43 2.32
401 402 4.509600 GGATCTTGACACCTCGATCAATTC 59.490 45.833 0.00 1.76 34.43 2.17
402 403 4.808414 TCTTGACACCTCGATCAATTCT 57.192 40.909 0.00 0.00 34.43 2.40
403 404 5.152623 TCTTGACACCTCGATCAATTCTT 57.847 39.130 0.00 0.00 34.43 2.52
404 405 5.551233 TCTTGACACCTCGATCAATTCTTT 58.449 37.500 0.00 0.00 34.43 2.52
405 406 5.997746 TCTTGACACCTCGATCAATTCTTTT 59.002 36.000 0.00 0.00 34.43 2.27
406 407 7.158697 TCTTGACACCTCGATCAATTCTTTTA 58.841 34.615 0.00 0.00 34.43 1.52
407 408 7.659799 TCTTGACACCTCGATCAATTCTTTTAA 59.340 33.333 0.00 0.00 34.43 1.52
408 409 7.921786 TGACACCTCGATCAATTCTTTTAAT 57.078 32.000 0.00 0.00 0.00 1.40
409 410 7.974675 TGACACCTCGATCAATTCTTTTAATC 58.025 34.615 0.00 0.00 0.00 1.75
410 411 7.824289 TGACACCTCGATCAATTCTTTTAATCT 59.176 33.333 0.00 0.00 0.00 2.40
411 412 8.202745 ACACCTCGATCAATTCTTTTAATCTC 57.797 34.615 0.00 0.00 0.00 2.75
412 413 8.043710 ACACCTCGATCAATTCTTTTAATCTCT 58.956 33.333 0.00 0.00 0.00 3.10
413 414 8.333908 CACCTCGATCAATTCTTTTAATCTCTG 58.666 37.037 0.00 0.00 0.00 3.35
414 415 7.497249 ACCTCGATCAATTCTTTTAATCTCTGG 59.503 37.037 0.00 0.00 0.00 3.86
415 416 7.041508 CCTCGATCAATTCTTTTAATCTCTGGG 60.042 40.741 0.00 0.00 0.00 4.45
416 417 6.260936 TCGATCAATTCTTTTAATCTCTGGGC 59.739 38.462 0.00 0.00 0.00 5.36
417 418 6.514048 CGATCAATTCTTTTAATCTCTGGGCC 60.514 42.308 0.00 0.00 0.00 5.80
418 419 5.831103 TCAATTCTTTTAATCTCTGGGCCT 58.169 37.500 4.53 0.00 0.00 5.19
419 420 6.256053 TCAATTCTTTTAATCTCTGGGCCTT 58.744 36.000 4.53 0.00 0.00 4.35
420 421 6.378280 TCAATTCTTTTAATCTCTGGGCCTTC 59.622 38.462 4.53 0.00 0.00 3.46
421 422 4.236527 TCTTTTAATCTCTGGGCCTTCC 57.763 45.455 4.53 0.00 0.00 3.46
433 434 2.651382 GGCCTTCCCAATAATACCGT 57.349 50.000 0.00 0.00 0.00 4.83
434 435 2.501261 GGCCTTCCCAATAATACCGTC 58.499 52.381 0.00 0.00 0.00 4.79
435 436 2.140717 GCCTTCCCAATAATACCGTCG 58.859 52.381 0.00 0.00 0.00 5.12
436 437 2.762745 CCTTCCCAATAATACCGTCGG 58.237 52.381 10.48 10.48 0.00 4.79
437 438 2.366266 CCTTCCCAATAATACCGTCGGA 59.634 50.000 20.51 1.60 0.00 4.55
438 439 3.387397 CTTCCCAATAATACCGTCGGAC 58.613 50.000 20.51 0.00 0.00 4.79
439 440 1.688197 TCCCAATAATACCGTCGGACC 59.312 52.381 20.51 0.00 0.00 4.46
440 441 1.603678 CCCAATAATACCGTCGGACCG 60.604 57.143 20.51 7.84 0.00 4.79
441 442 1.067516 CCAATAATACCGTCGGACCGT 59.932 52.381 20.51 7.27 0.00 4.83
442 443 2.121786 CAATAATACCGTCGGACCGTG 58.878 52.381 20.51 7.84 0.00 4.94
443 444 0.670162 ATAATACCGTCGGACCGTGG 59.330 55.000 20.51 21.26 0.00 4.94
444 445 0.393673 TAATACCGTCGGACCGTGGA 60.394 55.000 27.09 14.98 0.00 4.02
445 446 1.937546 AATACCGTCGGACCGTGGAC 61.938 60.000 27.09 13.25 0.00 4.02
448 449 4.415332 CGTCGGACCGTGGACCTG 62.415 72.222 14.79 0.36 0.00 4.00
449 450 3.300765 GTCGGACCGTGGACCTGT 61.301 66.667 14.79 0.00 0.00 4.00
450 451 2.522436 TCGGACCGTGGACCTGTT 60.522 61.111 14.79 0.00 0.00 3.16
451 452 2.048503 CGGACCGTGGACCTGTTC 60.049 66.667 5.48 0.00 0.00 3.18
452 453 2.346365 GGACCGTGGACCTGTTCC 59.654 66.667 0.00 0.00 46.13 3.62
459 460 2.351276 GGACCTGTTCCACGGCAT 59.649 61.111 0.00 0.00 45.10 4.40
460 461 1.745489 GGACCTGTTCCACGGCATC 60.745 63.158 0.00 0.00 45.10 3.91
461 462 2.047274 ACCTGTTCCACGGCATCG 60.047 61.111 0.00 0.00 43.02 3.84
462 463 2.264480 CCTGTTCCACGGCATCGA 59.736 61.111 0.00 0.00 40.11 3.59
463 464 1.811266 CCTGTTCCACGGCATCGAG 60.811 63.158 0.00 0.00 40.11 4.04
464 465 1.811266 CTGTTCCACGGCATCGAGG 60.811 63.158 0.00 0.00 46.22 4.63
470 471 3.659850 CACGGCATCGAGGATAACA 57.340 52.632 0.00 0.00 40.11 2.41
471 472 2.154854 CACGGCATCGAGGATAACAT 57.845 50.000 0.00 0.00 40.11 2.71
472 473 2.483876 CACGGCATCGAGGATAACATT 58.516 47.619 0.00 0.00 40.11 2.71
473 474 2.872245 CACGGCATCGAGGATAACATTT 59.128 45.455 0.00 0.00 40.11 2.32
474 475 2.872245 ACGGCATCGAGGATAACATTTG 59.128 45.455 0.00 0.00 40.11 2.32
475 476 3.130633 CGGCATCGAGGATAACATTTGA 58.869 45.455 0.00 0.00 39.00 2.69
476 477 3.559655 CGGCATCGAGGATAACATTTGAA 59.440 43.478 0.00 0.00 39.00 2.69
477 478 4.319046 CGGCATCGAGGATAACATTTGAAG 60.319 45.833 0.00 0.00 39.00 3.02
478 479 4.576463 GGCATCGAGGATAACATTTGAAGT 59.424 41.667 0.00 0.00 0.00 3.01
479 480 5.504665 GGCATCGAGGATAACATTTGAAGTG 60.505 44.000 0.00 0.00 0.00 3.16
480 481 5.505286 CATCGAGGATAACATTTGAAGTGC 58.495 41.667 0.00 0.00 0.00 4.40
481 482 4.574892 TCGAGGATAACATTTGAAGTGCA 58.425 39.130 0.00 0.00 0.00 4.57
482 483 5.000591 TCGAGGATAACATTTGAAGTGCAA 58.999 37.500 0.00 0.00 33.88 4.08
483 484 5.088739 CGAGGATAACATTTGAAGTGCAAC 58.911 41.667 0.00 0.00 35.91 4.17
484 485 5.046910 AGGATAACATTTGAAGTGCAACG 57.953 39.130 0.00 0.00 45.86 4.10
485 486 3.608073 GGATAACATTTGAAGTGCAACGC 59.392 43.478 0.00 0.00 45.86 4.84
486 487 1.851658 AACATTTGAAGTGCAACGCC 58.148 45.000 0.00 0.00 45.86 5.68
487 488 0.031994 ACATTTGAAGTGCAACGCCC 59.968 50.000 0.00 0.00 45.86 6.13
488 489 0.667184 CATTTGAAGTGCAACGCCCC 60.667 55.000 0.00 0.00 45.86 5.80
489 490 1.112315 ATTTGAAGTGCAACGCCCCA 61.112 50.000 0.00 0.00 45.86 4.96
490 491 1.323271 TTTGAAGTGCAACGCCCCAA 61.323 50.000 0.00 0.00 45.86 4.12
491 492 1.323271 TTGAAGTGCAACGCCCCAAA 61.323 50.000 0.00 0.00 45.86 3.28
492 493 1.299850 GAAGTGCAACGCCCCAAAC 60.300 57.895 0.00 0.00 45.86 2.93
493 494 2.999363 GAAGTGCAACGCCCCAAACG 62.999 60.000 0.00 0.00 45.86 3.60
494 495 3.587933 GTGCAACGCCCCAAACGA 61.588 61.111 0.00 0.00 0.00 3.85
495 496 2.829003 TGCAACGCCCCAAACGAA 60.829 55.556 0.00 0.00 0.00 3.85
496 497 2.354188 GCAACGCCCCAAACGAAC 60.354 61.111 0.00 0.00 0.00 3.95
497 498 3.111939 CAACGCCCCAAACGAACA 58.888 55.556 0.00 0.00 0.00 3.18
498 499 1.298788 CAACGCCCCAAACGAACAC 60.299 57.895 0.00 0.00 0.00 3.32
499 500 2.825975 AACGCCCCAAACGAACACG 61.826 57.895 0.00 0.00 0.00 4.49
500 501 3.273834 CGCCCCAAACGAACACGT 61.274 61.111 0.00 0.00 42.17 4.49
501 502 2.330041 GCCCCAAACGAACACGTG 59.670 61.111 15.48 15.48 40.20 4.49
502 503 2.474612 GCCCCAAACGAACACGTGT 61.475 57.895 17.22 17.22 40.20 4.49
503 504 1.353804 CCCCAAACGAACACGTGTG 59.646 57.895 24.16 13.46 42.66 3.82
504 505 1.090625 CCCCAAACGAACACGTGTGA 61.091 55.000 24.16 0.00 44.86 3.58
505 506 0.727970 CCCAAACGAACACGTGTGAA 59.272 50.000 24.16 0.00 44.86 3.18
506 507 1.530236 CCCAAACGAACACGTGTGAAC 60.530 52.381 24.16 15.38 44.86 3.18
507 508 1.128878 CCAAACGAACACGTGTGAACA 59.871 47.619 24.16 0.00 44.86 3.18
508 509 2.427169 CAAACGAACACGTGTGAACAG 58.573 47.619 24.16 13.89 44.86 3.16
509 510 1.717194 AACGAACACGTGTGAACAGT 58.283 45.000 24.16 14.53 40.20 3.55
510 511 1.717194 ACGAACACGTGTGAACAGTT 58.283 45.000 24.16 3.82 38.85 3.16
511 512 2.070783 ACGAACACGTGTGAACAGTTT 58.929 42.857 24.16 2.92 38.85 2.66
512 513 2.159761 ACGAACACGTGTGAACAGTTTG 60.160 45.455 24.16 10.88 38.85 2.93
513 514 2.780993 GAACACGTGTGAACAGTTTGG 58.219 47.619 24.16 0.00 0.00 3.28
514 515 1.816074 ACACGTGTGAACAGTTTGGT 58.184 45.000 22.71 0.00 0.00 3.67
515 516 2.156098 ACACGTGTGAACAGTTTGGTT 58.844 42.857 22.71 0.00 0.00 3.67
516 517 2.160813 ACACGTGTGAACAGTTTGGTTC 59.839 45.455 22.71 0.00 45.75 3.62
521 522 3.544615 GAACAGTTTGGTTCGGTGC 57.455 52.632 0.00 0.00 37.96 5.01
522 523 1.021968 GAACAGTTTGGTTCGGTGCT 58.978 50.000 0.00 0.00 37.96 4.40
523 524 1.002792 GAACAGTTTGGTTCGGTGCTC 60.003 52.381 0.00 0.00 37.96 4.26
524 525 0.180406 ACAGTTTGGTTCGGTGCTCT 59.820 50.000 0.00 0.00 0.00 4.09
525 526 0.868406 CAGTTTGGTTCGGTGCTCTC 59.132 55.000 0.00 0.00 0.00 3.20
526 527 0.468226 AGTTTGGTTCGGTGCTCTCA 59.532 50.000 0.00 0.00 0.00 3.27
527 528 0.868406 GTTTGGTTCGGTGCTCTCAG 59.132 55.000 0.00 0.00 0.00 3.35
528 529 0.468226 TTTGGTTCGGTGCTCTCAGT 59.532 50.000 0.00 0.00 0.00 3.41
529 530 1.334160 TTGGTTCGGTGCTCTCAGTA 58.666 50.000 0.00 0.00 0.00 2.74
530 531 1.557099 TGGTTCGGTGCTCTCAGTAT 58.443 50.000 0.00 0.00 0.00 2.12
531 532 1.476891 TGGTTCGGTGCTCTCAGTATC 59.523 52.381 0.00 0.00 0.00 2.24
532 533 1.751924 GGTTCGGTGCTCTCAGTATCT 59.248 52.381 0.00 0.00 0.00 1.98
533 534 2.223618 GGTTCGGTGCTCTCAGTATCTC 60.224 54.545 0.00 0.00 0.00 2.75
534 535 2.420058 TCGGTGCTCTCAGTATCTCA 57.580 50.000 0.00 0.00 0.00 3.27
535 536 2.017782 TCGGTGCTCTCAGTATCTCAC 58.982 52.381 0.00 0.00 0.00 3.51
536 537 1.066303 CGGTGCTCTCAGTATCTCACC 59.934 57.143 0.00 0.00 40.24 4.02
592 593 2.555199 CGACCTCCATTGAAGATGACC 58.445 52.381 0.00 0.00 0.00 4.02
601 602 0.104120 TGAAGATGACCGCCGTATGG 59.896 55.000 0.00 0.00 38.77 2.74
602 603 0.104304 GAAGATGACCGCCGTATGGT 59.896 55.000 2.17 0.00 44.10 3.55
613 614 1.483415 GCCGTATGGTTTAGTGGGAGA 59.517 52.381 2.17 0.00 37.67 3.71
615 616 2.483188 CCGTATGGTTTAGTGGGAGAGC 60.483 54.545 0.00 0.00 0.00 4.09
618 619 4.499357 CGTATGGTTTAGTGGGAGAGCTAC 60.499 50.000 0.00 0.00 0.00 3.58
619 620 2.897350 TGGTTTAGTGGGAGAGCTACA 58.103 47.619 0.00 0.00 0.00 2.74
620 621 3.450904 TGGTTTAGTGGGAGAGCTACAT 58.549 45.455 0.00 0.00 0.00 2.29
621 622 3.844211 TGGTTTAGTGGGAGAGCTACATT 59.156 43.478 0.00 0.00 0.00 2.71
622 623 5.027460 TGGTTTAGTGGGAGAGCTACATTA 58.973 41.667 0.00 0.00 0.00 1.90
625 626 5.609533 TTAGTGGGAGAGCTACATTAACC 57.390 43.478 0.00 0.00 0.00 2.85
626 627 3.450904 AGTGGGAGAGCTACATTAACCA 58.549 45.455 0.00 0.00 0.00 3.67
627 628 3.844211 AGTGGGAGAGCTACATTAACCAA 59.156 43.478 0.00 0.00 0.00 3.67
628 629 3.939592 GTGGGAGAGCTACATTAACCAAC 59.060 47.826 0.00 0.00 0.00 3.77
629 630 3.054655 TGGGAGAGCTACATTAACCAACC 60.055 47.826 0.00 0.00 0.00 3.77
630 631 3.054655 GGGAGAGCTACATTAACCAACCA 60.055 47.826 0.00 0.00 0.00 3.67
631 632 4.385310 GGGAGAGCTACATTAACCAACCAT 60.385 45.833 0.00 0.00 0.00 3.55
632 633 4.816925 GGAGAGCTACATTAACCAACCATC 59.183 45.833 0.00 0.00 0.00 3.51
638 639 8.225603 AGCTACATTAACCAACCATCTAATTG 57.774 34.615 0.00 0.00 0.00 2.32
664 665 6.126883 TGGTCGGTCTTAGTTAATCAATCCAT 60.127 38.462 0.00 0.00 0.00 3.41
667 668 8.142551 GTCGGTCTTAGTTAATCAATCCATAGT 58.857 37.037 0.00 0.00 0.00 2.12
669 670 9.627395 CGGTCTTAGTTAATCAATCCATAGTAG 57.373 37.037 0.00 0.00 0.00 2.57
675 676 8.964476 AGTTAATCAATCCATAGTAGTGGTTG 57.036 34.615 0.00 0.00 40.27 3.77
676 677 7.993183 AGTTAATCAATCCATAGTAGTGGTTGG 59.007 37.037 0.00 0.00 40.27 3.77
677 678 5.975988 ATCAATCCATAGTAGTGGTTGGT 57.024 39.130 0.00 0.00 40.27 3.67
679 680 4.163458 TCAATCCATAGTAGTGGTTGGTCC 59.837 45.833 0.00 0.00 40.27 4.46
680 681 3.193395 TCCATAGTAGTGGTTGGTCCA 57.807 47.619 0.00 0.00 45.01 4.02
712 724 4.008933 AGGTCAGGTCAGCACGCC 62.009 66.667 0.00 0.00 0.00 5.68
721 733 2.505777 CAGCACGCCTCACTCTCG 60.506 66.667 0.00 0.00 0.00 4.04
722 734 4.427661 AGCACGCCTCACTCTCGC 62.428 66.667 0.00 0.00 0.00 5.03
759 771 2.517450 CGCTCGGTCGCTCCATTTC 61.517 63.158 0.00 0.00 35.57 2.17
776 788 2.781595 TTCGCTCGTTTGCTCTCCCC 62.782 60.000 0.00 0.00 0.00 4.81
866 886 2.048597 AGTGGATTCGCGCGTGAA 60.049 55.556 34.19 34.19 0.00 3.18
871 891 0.524816 GGATTCGCGCGTGAAGTAGA 60.525 55.000 34.70 16.64 0.00 2.59
879 899 0.454600 GCGTGAAGTAGATCCCGTCA 59.545 55.000 0.00 0.00 0.00 4.35
880 900 1.534175 GCGTGAAGTAGATCCCGTCAG 60.534 57.143 0.00 0.00 0.00 3.51
882 902 2.619177 CGTGAAGTAGATCCCGTCAGAT 59.381 50.000 0.00 0.00 0.00 2.90
902 922 8.310532 TCAGATCCTGTATTCCCTCTTGGGTA 62.311 46.154 0.65 0.00 42.22 3.69
920 941 4.278669 TGGGTACATAGATTCGCTCTCTTC 59.721 45.833 0.00 0.00 35.28 2.87
925 946 6.909550 ACATAGATTCGCTCTCTTCCTAAT 57.090 37.500 0.00 0.00 35.28 1.73
926 947 7.296628 ACATAGATTCGCTCTCTTCCTAATT 57.703 36.000 0.00 0.00 35.28 1.40
927 948 8.410673 ACATAGATTCGCTCTCTTCCTAATTA 57.589 34.615 0.00 0.00 35.28 1.40
928 949 9.030452 ACATAGATTCGCTCTCTTCCTAATTAT 57.970 33.333 0.00 0.00 35.28 1.28
931 952 8.644374 AGATTCGCTCTCTTCCTAATTATACT 57.356 34.615 0.00 0.00 0.00 2.12
932 953 8.736244 AGATTCGCTCTCTTCCTAATTATACTC 58.264 37.037 0.00 0.00 0.00 2.59
936 957 9.688091 TCGCTCTCTTCCTAATTATACTCATAT 57.312 33.333 0.00 0.00 0.00 1.78
952 973 3.732212 TCATATTCTGCATCTGTTCCCG 58.268 45.455 0.00 0.00 0.00 5.14
954 975 4.343814 TCATATTCTGCATCTGTTCCCGTA 59.656 41.667 0.00 0.00 0.00 4.02
962 983 5.979993 TGCATCTGTTCCCGTAAAGTAATA 58.020 37.500 0.00 0.00 0.00 0.98
965 986 7.147863 TGCATCTGTTCCCGTAAAGTAATACTA 60.148 37.037 0.00 0.00 0.00 1.82
1471 1506 1.957877 CCGGTCCTGAATACTCTCCTC 59.042 57.143 0.00 0.00 0.00 3.71
1472 1507 1.957877 CGGTCCTGAATACTCTCCTCC 59.042 57.143 0.00 0.00 0.00 4.30
1473 1508 2.423660 CGGTCCTGAATACTCTCCTCCT 60.424 54.545 0.00 0.00 0.00 3.69
1515 1556 0.531532 CGGAGCCTGGTGATCATGTC 60.532 60.000 0.00 0.00 0.00 3.06
1543 1584 4.767255 GCCCTGTGGGTGAGCTCG 62.767 72.222 9.64 0.00 46.51 5.03
1868 1916 6.316390 CACTCCACCTATTCAGGAATTTACAC 59.684 42.308 0.00 0.00 45.91 2.90
1871 1919 7.562135 TCCACCTATTCAGGAATTTACACTAC 58.438 38.462 0.00 0.00 45.91 2.73
1872 1920 7.181305 TCCACCTATTCAGGAATTTACACTACA 59.819 37.037 0.00 0.00 45.91 2.74
1873 1921 7.993183 CCACCTATTCAGGAATTTACACTACAT 59.007 37.037 0.00 0.00 45.91 2.29
1876 1924 9.046296 CCTATTCAGGAATTTACACTACATGAC 57.954 37.037 0.00 0.00 45.91 3.06
1877 1925 9.823647 CTATTCAGGAATTTACACTACATGACT 57.176 33.333 0.00 0.00 32.50 3.41
1879 1927 8.997621 TTCAGGAATTTACACTACATGACTAC 57.002 34.615 0.00 0.00 0.00 2.73
1880 1928 8.129496 TCAGGAATTTACACTACATGACTACA 57.871 34.615 0.00 0.00 0.00 2.74
1881 1929 8.590204 TCAGGAATTTACACTACATGACTACAA 58.410 33.333 0.00 0.00 0.00 2.41
1903 2063 7.624549 ACAAGATAATGTGAGAGAGGCTTTAA 58.375 34.615 0.00 0.00 30.82 1.52
1930 2090 1.375098 GCTGCTGCAAGGGCTTAGAG 61.375 60.000 11.11 0.00 41.91 2.43
1948 2108 8.710835 GCTTAGAGATAAGCTAAGTTGACTTT 57.289 34.615 11.73 0.00 46.49 2.66
1975 2264 3.951037 TGCTTTCTTTACAAGTTGAGCCA 59.049 39.130 10.54 0.00 32.20 4.75
1983 2272 3.715628 ACAAGTTGAGCCATGTTTGTC 57.284 42.857 10.54 0.00 0.00 3.18
2002 2291 4.632153 TGTCTGGACTTCAGCTTAACTTC 58.368 43.478 2.38 0.00 43.06 3.01
2004 2293 4.688413 GTCTGGACTTCAGCTTAACTTCTG 59.312 45.833 0.00 0.00 43.06 3.02
2030 2319 3.870538 AGAGCTAATCATGGGCAATCA 57.129 42.857 0.00 0.00 0.00 2.57
2037 2326 5.244626 GCTAATCATGGGCAATCATACCTTT 59.755 40.000 0.00 0.00 0.00 3.11
2123 2412 4.794981 GCAAGTGTGCCATCATCATATTGG 60.795 45.833 0.00 0.00 45.68 3.16
2169 2486 7.386851 TCTACTGTAACTTCCTGAATTCCTTG 58.613 38.462 2.27 0.00 0.00 3.61
2170 2487 5.941788 ACTGTAACTTCCTGAATTCCTTGT 58.058 37.500 2.27 0.00 0.00 3.16
2171 2488 5.765182 ACTGTAACTTCCTGAATTCCTTGTG 59.235 40.000 2.27 0.00 0.00 3.33
2295 2621 7.201732 CCAGGTACTTCATTGTAATTGATGACC 60.202 40.741 0.00 0.00 34.60 4.02
2414 2743 0.253044 AGGCATGCTGTGGTTATCGT 59.747 50.000 18.92 0.00 0.00 3.73
2453 2782 6.100004 TCAGATGGAATTTCTTAGTGACGAC 58.900 40.000 0.00 0.00 0.00 4.34
2506 2838 6.545504 TTTCTCAGAAAATCAAAGTCCTCG 57.454 37.500 0.00 0.00 0.00 4.63
2509 2841 3.987868 TCAGAAAATCAAAGTCCTCGACG 59.012 43.478 0.00 0.00 37.67 5.12
3065 3409 5.344933 TGATAAAGTTCGTCGATTGTCACTG 59.655 40.000 0.00 0.00 0.00 3.66
3182 3526 5.863935 GCCTTCATTGATGGTGTTTAAGTTC 59.136 40.000 17.27 0.00 30.69 3.01
3233 3577 5.414765 GGGTGATCTTGGAAATACGAGTTTT 59.585 40.000 0.00 0.00 0.00 2.43
3387 3731 2.752903 GCTATTCCACCGGACATTGTTT 59.247 45.455 9.46 0.00 0.00 2.83
3530 3874 0.759060 TATGGAGCCTTGGCGAGCTA 60.759 55.000 5.95 0.00 40.11 3.32
3671 4018 2.294078 GGCTCCTGGTACTGCAGGT 61.294 63.158 19.93 6.35 39.51 4.00
3674 4021 1.069358 GCTCCTGGTACTGCAGGTATC 59.931 57.143 19.93 8.96 39.51 2.24
3842 4189 5.120208 TGTTAAAGAACTGCTAGCGAATGAC 59.880 40.000 10.77 0.00 36.45 3.06
3983 4330 1.145803 GGTGTGGCGTACTTTGTCTC 58.854 55.000 0.00 0.00 0.00 3.36
3998 4345 0.674895 GTCTCGCTTTCATGGCAGGT 60.675 55.000 0.00 0.00 0.00 4.00
4004 4351 1.477700 GCTTTCATGGCAGGTGCAATA 59.522 47.619 4.01 0.00 44.36 1.90
4024 4371 1.558756 ACCCAATCTTCAGAGGCTCAG 59.441 52.381 18.26 9.22 0.00 3.35
4198 4545 1.406539 CAAGCATCCAATGTGCCCTAC 59.593 52.381 0.00 0.00 43.50 3.18
4215 4562 4.632153 CCCTACATCTAGTGTACAATGGC 58.368 47.826 5.98 0.00 42.29 4.40
4233 4580 2.309755 TGGCTGGATCCAGTTGAGAAAT 59.690 45.455 36.32 0.00 45.24 2.17
4365 4712 7.726291 CAGGGTATGAATCTTCCTTACTCTAGA 59.274 40.741 0.00 0.00 29.64 2.43
4410 4760 6.295518 GCCCTTTTCATTCATTTCTTCTCCTT 60.296 38.462 0.00 0.00 0.00 3.36
4469 4853 4.074970 ACCTCATTTTCCTGCACTGTAAG 58.925 43.478 0.00 0.00 42.29 2.34
4486 4870 8.801715 CACTGTAAGACATTGCAAATAAAGTT 57.198 30.769 1.71 0.00 37.43 2.66
4495 4879 3.167814 GCAAATAAAGTTGCGCCAAAC 57.832 42.857 4.18 3.20 44.05 2.93
4599 5058 3.008517 TTCCGCTGGGCTGGATCA 61.009 61.111 0.00 0.00 33.18 2.92
4605 5064 3.083349 TGGGCTGGATCAGGACCG 61.083 66.667 4.86 0.00 31.21 4.79
4609 5068 4.899239 CTGGATCAGGACCGCGCC 62.899 72.222 0.00 0.00 0.00 6.53
4612 5071 4.814294 GATCAGGACCGCGCCGTT 62.814 66.667 0.00 0.00 0.00 4.44
4626 5085 3.927555 CCGTTGAGGCCTACAGAAA 57.072 52.632 4.42 0.00 0.00 2.52
4637 5096 3.748568 GGCCTACAGAAACTCTTGTTCAG 59.251 47.826 0.00 0.00 34.96 3.02
4639 5098 4.743955 GCCTACAGAAACTCTTGTTCAGGT 60.744 45.833 0.00 0.00 34.96 4.00
4640 5099 4.991687 CCTACAGAAACTCTTGTTCAGGTC 59.008 45.833 0.00 0.00 34.96 3.85
4669 5128 4.446857 TCTTCAAAAGCGTGTTAGAACG 57.553 40.909 0.00 0.00 46.30 3.95
4686 5145 2.520686 ACGCGCTACTTTTGCATTAC 57.479 45.000 5.73 0.00 0.00 1.89
4708 5167 1.132881 AGAAAGGCCACCAAAATGGGA 60.133 47.619 5.01 0.00 43.37 4.37
4730 5189 3.118038 ACAAAGCTACAGAACCACCAAGA 60.118 43.478 0.00 0.00 0.00 3.02
4733 5192 3.507411 AGCTACAGAACCACCAAGAGTA 58.493 45.455 0.00 0.00 0.00 2.59
4750 5209 1.542030 AGTAGCACTGACCGAACTGAG 59.458 52.381 0.00 0.00 0.00 3.35
4752 5211 0.600557 AGCACTGACCGAACTGAGAG 59.399 55.000 0.00 0.00 0.00 3.20
4771 5230 3.048501 GAGCAAGAAAGAGCAGCAAAAC 58.951 45.455 0.00 0.00 0.00 2.43
4775 5234 4.791974 CAAGAAAGAGCAGCAAAACCTAG 58.208 43.478 0.00 0.00 0.00 3.02
4780 5239 2.634940 AGAGCAGCAAAACCTAGAGACA 59.365 45.455 0.00 0.00 0.00 3.41
4794 5253 4.686554 CCTAGAGACACCGCTAAATTATGC 59.313 45.833 0.00 0.00 0.00 3.14
4839 5298 2.816087 GCTCTCATTCAAGTGCTTTGGA 59.184 45.455 2.44 0.00 37.39 3.53
4848 5307 4.272489 TCAAGTGCTTTGGATGGGAATAG 58.728 43.478 2.44 0.00 37.39 1.73
4858 5317 3.116199 TGGATGGGAATAGGACAGAGGAT 60.116 47.826 0.00 0.00 0.00 3.24
4864 5323 4.133078 GGAATAGGACAGAGGATGCAAAG 58.867 47.826 0.00 0.00 0.00 2.77
4872 5331 3.953612 ACAGAGGATGCAAAGTTGTTCAA 59.046 39.130 0.00 0.00 0.00 2.69
4889 5348 6.801539 TGTTCAATACCACTTCTTCATCAC 57.198 37.500 0.00 0.00 0.00 3.06
4907 5366 5.179742 TCATCACCAAATTTGCAAAGCATTC 59.820 36.000 18.19 0.00 38.76 2.67
4908 5367 4.706035 TCACCAAATTTGCAAAGCATTCT 58.294 34.783 18.19 0.00 38.76 2.40
4911 5370 4.692155 ACCAAATTTGCAAAGCATTCTAGC 59.308 37.500 18.19 0.00 38.76 3.42
4916 5375 7.630242 AATTTGCAAAGCATTCTAGCTAGTA 57.370 32.000 20.10 11.66 45.89 1.82
4922 5381 6.703607 GCAAAGCATTCTAGCTAGTAATCAGA 59.296 38.462 20.10 0.00 45.89 3.27
4923 5382 7.225538 GCAAAGCATTCTAGCTAGTAATCAGAA 59.774 37.037 20.10 7.93 45.89 3.02
4924 5383 9.270640 CAAAGCATTCTAGCTAGTAATCAGAAT 57.729 33.333 20.10 9.92 45.89 2.40
4931 5390 8.105097 TCTAGCTAGTAATCAGAATGTAGCTG 57.895 38.462 20.10 0.00 42.41 4.24
4938 5397 2.977914 TCAGAATGTAGCTGCTGAACC 58.022 47.619 13.43 0.00 34.71 3.62
4967 5426 1.352017 AGATGTTGCCAGACACCATGA 59.648 47.619 0.00 0.00 30.41 3.07
4977 5436 3.885297 CCAGACACCATGAAACAAGAGTT 59.115 43.478 0.00 0.00 40.40 3.01
5005 5464 3.007920 AGCCAGTCTGGGGAGCAG 61.008 66.667 20.72 0.00 38.19 4.24
5029 5488 0.956633 CTGCTGAAACTGGTGTGCAT 59.043 50.000 0.00 0.00 0.00 3.96
5032 5491 1.337703 GCTGAAACTGGTGTGCATTCA 59.662 47.619 0.00 0.00 0.00 2.57
5046 5505 3.194542 GTGCATTCACAGGTCTCTACTCT 59.805 47.826 0.00 0.00 42.66 3.24
5064 5523 2.354510 CTCTCTCATCGCGTTCTCTCTT 59.645 50.000 5.77 0.00 0.00 2.85
5065 5524 2.096657 TCTCTCATCGCGTTCTCTCTTG 59.903 50.000 5.77 0.00 0.00 3.02
5066 5525 0.919981 CTCATCGCGTTCTCTCTTGC 59.080 55.000 5.77 0.00 0.00 4.01
5069 5528 0.037326 ATCGCGTTCTCTCTTGCCAA 60.037 50.000 5.77 0.00 0.00 4.52
5089 5548 3.914426 ACAAGGTACCTCTATGGCTTG 57.086 47.619 16.64 9.67 38.54 4.01
5092 5551 3.406512 AGGTACCTCTATGGCTTGACT 57.593 47.619 9.21 0.00 40.22 3.41
5103 5562 6.539173 TCTATGGCTTGACTCCACTTAAAAA 58.461 36.000 0.00 0.00 36.26 1.94
5106 5565 6.478512 TGGCTTGACTCCACTTAAAAATTT 57.521 33.333 0.00 0.00 0.00 1.82
5113 5572 7.657336 TGACTCCACTTAAAAATTTCCATCAC 58.343 34.615 0.00 0.00 0.00 3.06
5128 5587 9.865321 AATTTCCATCACTGTATGAATCTTTTG 57.135 29.630 0.00 0.00 41.93 2.44
5138 5597 7.395489 ACTGTATGAATCTTTTGCCTGAAGAAT 59.605 33.333 0.00 0.00 36.77 2.40
5142 5601 6.218019 TGAATCTTTTGCCTGAAGAATTGTG 58.782 36.000 0.00 0.00 36.77 3.33
5145 5604 7.707624 ATCTTTTGCCTGAAGAATTGTGATA 57.292 32.000 0.00 0.00 36.77 2.15
5146 5605 7.523293 TCTTTTGCCTGAAGAATTGTGATAA 57.477 32.000 0.00 0.00 30.60 1.75
5147 5606 7.950512 TCTTTTGCCTGAAGAATTGTGATAAA 58.049 30.769 0.00 0.00 30.60 1.40
5179 5638 1.691196 CTTTCCTTTCAGGCACCACA 58.309 50.000 0.00 0.00 34.61 4.17
5180 5639 2.031120 CTTTCCTTTCAGGCACCACAA 58.969 47.619 0.00 0.00 34.61 3.33
5181 5640 2.151502 TTCCTTTCAGGCACCACAAA 57.848 45.000 0.00 0.00 34.61 2.83
5186 5645 1.691196 TTCAGGCACCACAAAGAAGG 58.309 50.000 0.00 0.00 0.00 3.46
5192 5651 1.528129 CACCACAAAGAAGGAGAGCC 58.472 55.000 0.00 0.00 0.00 4.70
5223 5682 2.027653 GCTCAACTTAGCTGGAGAAGGT 60.028 50.000 0.00 0.00 39.50 3.50
5247 5706 3.875727 CGGAGATGAGCTCAAACATCATT 59.124 43.478 22.50 0.18 45.81 2.57
5248 5707 4.025061 CGGAGATGAGCTCAAACATCATTC 60.025 45.833 22.50 11.03 45.81 2.67
5249 5708 4.025061 GGAGATGAGCTCAAACATCATTCG 60.025 45.833 22.50 0.00 45.81 3.34
5260 5719 3.627395 ACATCATTCGGAAGCAGGTAA 57.373 42.857 0.00 0.00 0.00 2.85
5261 5720 4.156455 ACATCATTCGGAAGCAGGTAAT 57.844 40.909 0.00 0.00 0.00 1.89
5280 5741 8.264347 CAGGTAATAAATTTGGTTTGGCCTATT 58.736 33.333 3.32 0.00 38.35 1.73
5316 5777 6.424509 GGTGATCTGATGTTCTGATGAAGATC 59.575 42.308 0.00 8.39 46.75 2.75
5317 5778 6.424509 GTGATCTGATGTTCTGATGAAGATCC 59.575 42.308 11.55 0.60 46.32 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.432741 GCAGGGGAGGAGGTTGCC 62.433 72.222 0.00 0.00 0.00 4.52
21 22 4.432741 GGCAGGGGAGGAGGTTGC 62.433 72.222 0.00 0.00 0.00 4.17
22 23 2.935481 TGGCAGGGGAGGAGGTTG 60.935 66.667 0.00 0.00 0.00 3.77
23 24 2.936032 GTGGCAGGGGAGGAGGTT 60.936 66.667 0.00 0.00 0.00 3.50
24 25 4.270153 TGTGGCAGGGGAGGAGGT 62.270 66.667 0.00 0.00 0.00 3.85
25 26 3.721706 GTGTGGCAGGGGAGGAGG 61.722 72.222 0.00 0.00 0.00 4.30
26 27 4.087892 CGTGTGGCAGGGGAGGAG 62.088 72.222 0.00 0.00 0.00 3.69
27 28 4.954118 ACGTGTGGCAGGGGAGGA 62.954 66.667 0.00 0.00 0.00 3.71
28 29 4.704833 CACGTGTGGCAGGGGAGG 62.705 72.222 7.58 0.00 0.00 4.30
29 30 3.941188 ACACGTGTGGCAGGGGAG 61.941 66.667 22.71 0.00 34.19 4.30
30 31 4.248842 CACACGTGTGGCAGGGGA 62.249 66.667 35.65 0.00 42.10 4.81
38 39 1.460743 CTGATAACTGCCACACGTGTG 59.539 52.381 36.13 36.13 45.23 3.82
39 40 1.608025 CCTGATAACTGCCACACGTGT 60.608 52.381 17.22 17.22 0.00 4.49
40 41 1.078709 CCTGATAACTGCCACACGTG 58.921 55.000 15.48 15.48 0.00 4.49
41 42 0.973632 TCCTGATAACTGCCACACGT 59.026 50.000 0.00 0.00 0.00 4.49
42 43 1.359848 GTCCTGATAACTGCCACACG 58.640 55.000 0.00 0.00 0.00 4.49
43 44 1.679032 GGGTCCTGATAACTGCCACAC 60.679 57.143 0.00 0.00 0.00 3.82
44 45 0.618458 GGGTCCTGATAACTGCCACA 59.382 55.000 0.00 0.00 0.00 4.17
45 46 0.618458 TGGGTCCTGATAACTGCCAC 59.382 55.000 0.00 0.00 0.00 5.01
46 47 1.281867 CTTGGGTCCTGATAACTGCCA 59.718 52.381 0.00 0.00 0.00 4.92
47 48 1.559682 TCTTGGGTCCTGATAACTGCC 59.440 52.381 0.00 0.00 0.00 4.85
48 49 3.567478 ATCTTGGGTCCTGATAACTGC 57.433 47.619 0.00 0.00 0.00 4.40
49 50 9.799106 ATATTAAATCTTGGGTCCTGATAACTG 57.201 33.333 0.00 0.00 0.00 3.16
86 87 4.024387 CCGTATATGAATCAAACCGGTTGG 60.024 45.833 23.08 19.52 37.85 3.77
87 88 4.573201 ACCGTATATGAATCAAACCGGTTG 59.427 41.667 23.08 15.06 44.30 3.77
88 89 4.573201 CACCGTATATGAATCAAACCGGTT 59.427 41.667 15.86 15.86 44.30 4.44
89 90 4.411256 ACCGTATATGAATCAAACCGGT 57.589 40.909 0.00 0.00 42.15 5.28
90 91 3.059188 GCACCGTATATGAATCAAACCGG 60.059 47.826 0.00 0.00 39.96 5.28
91 92 3.807622 AGCACCGTATATGAATCAAACCG 59.192 43.478 0.00 0.00 0.00 4.44
92 93 5.107065 GCTAGCACCGTATATGAATCAAACC 60.107 44.000 10.63 0.00 0.00 3.27
93 94 5.465390 TGCTAGCACCGTATATGAATCAAAC 59.535 40.000 14.93 0.00 0.00 2.93
94 95 5.606505 TGCTAGCACCGTATATGAATCAAA 58.393 37.500 14.93 0.00 0.00 2.69
95 96 5.208463 TGCTAGCACCGTATATGAATCAA 57.792 39.130 14.93 0.00 0.00 2.57
96 97 4.864704 TGCTAGCACCGTATATGAATCA 57.135 40.909 14.93 0.00 0.00 2.57
97 98 6.330278 TGTATGCTAGCACCGTATATGAATC 58.670 40.000 22.07 0.00 0.00 2.52
98 99 6.280855 TGTATGCTAGCACCGTATATGAAT 57.719 37.500 22.07 1.47 0.00 2.57
99 100 5.715434 TGTATGCTAGCACCGTATATGAA 57.285 39.130 22.07 0.00 0.00 2.57
100 101 5.010213 TGTTGTATGCTAGCACCGTATATGA 59.990 40.000 22.07 0.00 0.00 2.15
101 102 5.227152 TGTTGTATGCTAGCACCGTATATG 58.773 41.667 22.07 0.00 0.00 1.78
102 103 5.462530 TGTTGTATGCTAGCACCGTATAT 57.537 39.130 22.07 4.57 0.00 0.86
103 104 4.922471 TGTTGTATGCTAGCACCGTATA 57.078 40.909 22.07 5.08 0.00 1.47
104 105 3.812156 TGTTGTATGCTAGCACCGTAT 57.188 42.857 22.07 6.25 0.00 3.06
105 106 3.255725 GTTGTTGTATGCTAGCACCGTA 58.744 45.455 22.07 5.93 0.00 4.02
106 107 2.073816 GTTGTTGTATGCTAGCACCGT 58.926 47.619 22.07 7.11 0.00 4.83
107 108 1.396996 GGTTGTTGTATGCTAGCACCG 59.603 52.381 22.07 0.00 0.00 4.94
108 109 2.678336 GAGGTTGTTGTATGCTAGCACC 59.322 50.000 22.07 14.04 0.00 5.01
109 110 3.334691 TGAGGTTGTTGTATGCTAGCAC 58.665 45.455 22.07 9.17 0.00 4.40
110 111 3.694043 TGAGGTTGTTGTATGCTAGCA 57.306 42.857 21.85 21.85 0.00 3.49
111 112 5.123820 TCAATTGAGGTTGTTGTATGCTAGC 59.876 40.000 8.10 8.10 0.00 3.42
112 113 6.149308 TGTCAATTGAGGTTGTTGTATGCTAG 59.851 38.462 8.80 0.00 0.00 3.42
113 114 6.000840 TGTCAATTGAGGTTGTTGTATGCTA 58.999 36.000 8.80 0.00 0.00 3.49
114 115 4.826733 TGTCAATTGAGGTTGTTGTATGCT 59.173 37.500 8.80 0.00 0.00 3.79
115 116 5.119931 TGTCAATTGAGGTTGTTGTATGC 57.880 39.130 8.80 0.00 0.00 3.14
116 117 8.592105 ATTTTGTCAATTGAGGTTGTTGTATG 57.408 30.769 8.80 0.00 0.00 2.39
117 118 8.641541 AGATTTTGTCAATTGAGGTTGTTGTAT 58.358 29.630 8.80 0.00 0.00 2.29
118 119 8.006298 AGATTTTGTCAATTGAGGTTGTTGTA 57.994 30.769 8.80 0.00 0.00 2.41
119 120 6.877236 AGATTTTGTCAATTGAGGTTGTTGT 58.123 32.000 8.80 0.00 0.00 3.32
120 121 8.352201 TCTAGATTTTGTCAATTGAGGTTGTTG 58.648 33.333 8.80 0.00 0.00 3.33
121 122 8.463930 TCTAGATTTTGTCAATTGAGGTTGTT 57.536 30.769 8.80 0.00 0.00 2.83
122 123 8.463930 TTCTAGATTTTGTCAATTGAGGTTGT 57.536 30.769 8.80 0.00 0.00 3.32
123 124 7.540055 GCTTCTAGATTTTGTCAATTGAGGTTG 59.460 37.037 8.80 0.00 0.00 3.77
124 125 7.231317 TGCTTCTAGATTTTGTCAATTGAGGTT 59.769 33.333 8.80 0.00 0.00 3.50
125 126 6.716628 TGCTTCTAGATTTTGTCAATTGAGGT 59.283 34.615 8.80 0.00 0.00 3.85
126 127 7.025963 GTGCTTCTAGATTTTGTCAATTGAGG 58.974 38.462 8.80 0.00 0.00 3.86
127 128 7.587629 TGTGCTTCTAGATTTTGTCAATTGAG 58.412 34.615 8.80 0.00 0.00 3.02
128 129 7.509141 TGTGCTTCTAGATTTTGTCAATTGA 57.491 32.000 3.38 3.38 0.00 2.57
129 130 8.752766 ATTGTGCTTCTAGATTTTGTCAATTG 57.247 30.769 0.00 0.00 0.00 2.32
130 131 9.415544 GAATTGTGCTTCTAGATTTTGTCAATT 57.584 29.630 14.70 14.70 35.48 2.32
131 132 8.800332 AGAATTGTGCTTCTAGATTTTGTCAAT 58.200 29.630 0.00 0.00 33.73 2.57
132 133 8.169977 AGAATTGTGCTTCTAGATTTTGTCAA 57.830 30.769 0.00 0.00 33.73 3.18
133 134 7.750229 AGAATTGTGCTTCTAGATTTTGTCA 57.250 32.000 0.00 0.00 33.73 3.58
134 135 7.900352 CGTAGAATTGTGCTTCTAGATTTTGTC 59.100 37.037 0.00 0.00 38.17 3.18
135 136 7.387948 ACGTAGAATTGTGCTTCTAGATTTTGT 59.612 33.333 0.00 0.00 38.17 2.83
136 137 7.689812 CACGTAGAATTGTGCTTCTAGATTTTG 59.310 37.037 0.00 0.00 38.17 2.44
137 138 7.387948 ACACGTAGAATTGTGCTTCTAGATTTT 59.612 33.333 0.00 0.00 38.17 1.82
138 139 6.874134 ACACGTAGAATTGTGCTTCTAGATTT 59.126 34.615 0.00 0.00 38.17 2.17
139 140 6.311445 CACACGTAGAATTGTGCTTCTAGATT 59.689 38.462 0.00 0.00 38.17 2.40
140 141 5.807520 CACACGTAGAATTGTGCTTCTAGAT 59.192 40.000 0.00 0.00 38.17 1.98
141 142 5.161358 CACACGTAGAATTGTGCTTCTAGA 58.839 41.667 0.00 0.00 38.17 2.43
142 143 4.327357 CCACACGTAGAATTGTGCTTCTAG 59.673 45.833 0.00 0.00 41.57 2.43
143 144 4.242475 CCACACGTAGAATTGTGCTTCTA 58.758 43.478 0.00 0.00 41.57 2.10
144 145 3.067106 CCACACGTAGAATTGTGCTTCT 58.933 45.455 0.00 0.00 41.57 2.85
145 146 2.412847 GCCACACGTAGAATTGTGCTTC 60.413 50.000 0.00 0.00 41.57 3.86
146 147 1.535462 GCCACACGTAGAATTGTGCTT 59.465 47.619 0.00 0.00 41.57 3.91
147 148 1.156736 GCCACACGTAGAATTGTGCT 58.843 50.000 0.00 0.00 41.57 4.40
148 149 0.168128 GGCCACACGTAGAATTGTGC 59.832 55.000 0.00 0.00 41.57 4.57
149 150 1.464608 CAGGCCACACGTAGAATTGTG 59.535 52.381 5.01 0.00 42.40 3.33
150 151 1.808411 CAGGCCACACGTAGAATTGT 58.192 50.000 5.01 0.00 0.00 2.71
151 152 0.447801 GCAGGCCACACGTAGAATTG 59.552 55.000 5.01 0.00 0.00 2.32
152 153 0.676782 GGCAGGCCACACGTAGAATT 60.677 55.000 5.01 0.00 35.81 2.17
153 154 1.078426 GGCAGGCCACACGTAGAAT 60.078 57.895 5.01 0.00 35.81 2.40
154 155 2.214216 AGGCAGGCCACACGTAGAA 61.214 57.895 13.63 0.00 38.92 2.10
155 156 2.603473 AGGCAGGCCACACGTAGA 60.603 61.111 13.63 0.00 38.92 2.59
156 157 2.244117 ATCAGGCAGGCCACACGTAG 62.244 60.000 13.63 0.00 38.92 3.51
157 158 2.238847 GATCAGGCAGGCCACACGTA 62.239 60.000 13.63 0.00 38.92 3.57
158 159 3.612247 GATCAGGCAGGCCACACGT 62.612 63.158 13.63 0.00 38.92 4.49
159 160 2.821366 GATCAGGCAGGCCACACG 60.821 66.667 13.63 0.00 38.92 4.49
160 161 0.895100 TTTGATCAGGCAGGCCACAC 60.895 55.000 13.63 0.00 38.92 3.82
161 162 0.178967 TTTTGATCAGGCAGGCCACA 60.179 50.000 13.63 4.44 38.92 4.17
162 163 1.134907 CATTTTGATCAGGCAGGCCAC 60.135 52.381 13.63 0.00 38.92 5.01
163 164 1.187974 CATTTTGATCAGGCAGGCCA 58.812 50.000 13.63 0.00 38.92 5.36
164 165 0.462789 CCATTTTGATCAGGCAGGCC 59.537 55.000 0.97 0.97 0.00 5.19
165 166 1.135721 GACCATTTTGATCAGGCAGGC 59.864 52.381 0.00 0.00 0.00 4.85
166 167 2.731572 AGACCATTTTGATCAGGCAGG 58.268 47.619 0.00 0.13 0.00 4.85
167 168 5.902613 TTTAGACCATTTTGATCAGGCAG 57.097 39.130 0.00 0.00 0.00 4.85
168 169 5.538053 TGTTTTAGACCATTTTGATCAGGCA 59.462 36.000 0.00 0.00 0.00 4.75
169 170 6.024552 TGTTTTAGACCATTTTGATCAGGC 57.975 37.500 0.00 0.00 0.00 4.85
172 173 9.638239 GCTTATTGTTTTAGACCATTTTGATCA 57.362 29.630 0.00 0.00 0.00 2.92
173 174 9.638239 TGCTTATTGTTTTAGACCATTTTGATC 57.362 29.630 0.00 0.00 0.00 2.92
181 182 9.407380 ACATCATATGCTTATTGTTTTAGACCA 57.593 29.630 0.00 0.00 0.00 4.02
182 183 9.884465 GACATCATATGCTTATTGTTTTAGACC 57.116 33.333 0.00 0.00 0.00 3.85
187 188 9.524106 CATGTGACATCATATGCTTATTGTTTT 57.476 29.630 5.78 0.00 38.34 2.43
188 189 8.905850 TCATGTGACATCATATGCTTATTGTTT 58.094 29.630 12.38 0.00 42.75 2.83
189 190 8.454570 TCATGTGACATCATATGCTTATTGTT 57.545 30.769 12.38 0.00 42.75 2.83
190 191 8.454570 TTCATGTGACATCATATGCTTATTGT 57.545 30.769 12.38 0.00 42.75 2.71
194 195 9.947433 TCATATTCATGTGACATCATATGCTTA 57.053 29.630 20.02 7.79 42.75 3.09
195 196 8.727910 GTCATATTCATGTGACATCATATGCTT 58.272 33.333 20.02 6.20 44.96 3.91
196 197 7.336176 GGTCATATTCATGTGACATCATATGCT 59.664 37.037 20.02 6.34 46.66 3.79
197 198 7.120138 TGGTCATATTCATGTGACATCATATGC 59.880 37.037 20.02 16.43 46.66 3.14
198 199 8.556213 TGGTCATATTCATGTGACATCATATG 57.444 34.615 19.32 19.32 46.66 1.78
199 200 9.577222 TTTGGTCATATTCATGTGACATCATAT 57.423 29.630 15.95 0.00 46.66 1.78
200 201 8.977267 TTTGGTCATATTCATGTGACATCATA 57.023 30.769 15.95 0.00 46.66 2.15
201 202 7.885009 TTTGGTCATATTCATGTGACATCAT 57.115 32.000 15.95 0.00 46.66 2.45
202 203 7.700022 TTTTGGTCATATTCATGTGACATCA 57.300 32.000 15.95 5.60 46.66 3.07
205 206 9.187996 ACATATTTTGGTCATATTCATGTGACA 57.812 29.630 15.95 0.00 46.66 3.58
206 207 9.669353 GACATATTTTGGTCATATTCATGTGAC 57.331 33.333 7.89 7.89 44.90 3.67
207 208 9.631257 AGACATATTTTGGTCATATTCATGTGA 57.369 29.630 0.00 0.00 36.50 3.58
217 218 9.499479 CAGCTAGATAAGACATATTTTGGTCAT 57.501 33.333 0.00 0.00 36.50 3.06
218 219 8.704668 TCAGCTAGATAAGACATATTTTGGTCA 58.295 33.333 0.00 0.00 36.50 4.02
219 220 9.717942 ATCAGCTAGATAAGACATATTTTGGTC 57.282 33.333 0.00 0.00 34.43 4.02
229 230 9.415008 AGTTCTAGAAATCAGCTAGATAAGACA 57.585 33.333 6.78 0.00 42.68 3.41
230 231 9.893305 GAGTTCTAGAAATCAGCTAGATAAGAC 57.107 37.037 24.19 0.15 42.68 3.01
231 232 9.073475 GGAGTTCTAGAAATCAGCTAGATAAGA 57.927 37.037 28.45 0.00 42.68 2.10
232 233 8.303876 GGGAGTTCTAGAAATCAGCTAGATAAG 58.696 40.741 28.45 0.00 42.68 1.73
233 234 8.007742 AGGGAGTTCTAGAAATCAGCTAGATAA 58.992 37.037 28.45 0.00 42.68 1.75
234 235 7.531317 AGGGAGTTCTAGAAATCAGCTAGATA 58.469 38.462 28.45 0.00 42.68 1.98
235 236 6.381250 AGGGAGTTCTAGAAATCAGCTAGAT 58.619 40.000 28.45 8.10 42.68 1.98
236 237 5.772004 AGGGAGTTCTAGAAATCAGCTAGA 58.228 41.667 28.45 0.00 41.78 2.43
237 238 7.775053 ATAGGGAGTTCTAGAAATCAGCTAG 57.225 40.000 28.45 0.00 37.16 3.42
298 299 1.006314 GCGTGCTGAGTCTGAGTGAC 61.006 60.000 0.47 0.00 45.67 3.67
299 300 1.175347 AGCGTGCTGAGTCTGAGTGA 61.175 55.000 0.47 0.00 0.00 3.41
300 301 1.007848 CAGCGTGCTGAGTCTGAGTG 61.008 60.000 16.69 0.00 46.30 3.51
301 302 1.175347 TCAGCGTGCTGAGTCTGAGT 61.175 55.000 19.99 0.00 46.80 3.41
302 303 1.583477 TCAGCGTGCTGAGTCTGAG 59.417 57.895 19.99 0.00 46.80 3.35
303 304 3.763671 TCAGCGTGCTGAGTCTGA 58.236 55.556 19.99 0.00 46.80 3.27
310 311 6.422100 AGTGAATAATACTAATCAGCGTGCTG 59.578 38.462 15.59 15.59 44.86 4.41
311 312 6.516718 AGTGAATAATACTAATCAGCGTGCT 58.483 36.000 0.00 0.00 0.00 4.40
312 313 6.642950 AGAGTGAATAATACTAATCAGCGTGC 59.357 38.462 0.00 0.00 0.00 5.34
313 314 8.079203 AGAGAGTGAATAATACTAATCAGCGTG 58.921 37.037 0.00 0.00 0.00 5.34
314 315 8.172352 AGAGAGTGAATAATACTAATCAGCGT 57.828 34.615 0.00 0.00 0.00 5.07
315 316 8.511321 AGAGAGAGTGAATAATACTAATCAGCG 58.489 37.037 0.00 0.00 0.00 5.18
327 328 9.113838 GCCAAATTTGATAGAGAGAGTGAATAA 57.886 33.333 19.86 0.00 0.00 1.40
328 329 7.716998 GGCCAAATTTGATAGAGAGAGTGAATA 59.283 37.037 19.86 0.00 0.00 1.75
329 330 6.545298 GGCCAAATTTGATAGAGAGAGTGAAT 59.455 38.462 19.86 0.00 0.00 2.57
330 331 5.882557 GGCCAAATTTGATAGAGAGAGTGAA 59.117 40.000 19.86 0.00 0.00 3.18
331 332 5.045651 TGGCCAAATTTGATAGAGAGAGTGA 60.046 40.000 19.86 0.00 0.00 3.41
332 333 5.188434 TGGCCAAATTTGATAGAGAGAGTG 58.812 41.667 19.86 0.00 0.00 3.51
333 334 5.441718 TGGCCAAATTTGATAGAGAGAGT 57.558 39.130 19.86 0.00 0.00 3.24
334 335 6.376581 AGTTTGGCCAAATTTGATAGAGAGAG 59.623 38.462 32.52 0.58 32.36 3.20
335 336 6.248433 AGTTTGGCCAAATTTGATAGAGAGA 58.752 36.000 32.52 3.19 32.36 3.10
336 337 6.521151 AGTTTGGCCAAATTTGATAGAGAG 57.479 37.500 32.52 2.03 32.36 3.20
337 338 7.068593 CCATAGTTTGGCCAAATTTGATAGAGA 59.931 37.037 32.52 12.11 39.09 3.10
338 339 7.068593 TCCATAGTTTGGCCAAATTTGATAGAG 59.931 37.037 32.52 16.00 46.01 2.43
339 340 6.894654 TCCATAGTTTGGCCAAATTTGATAGA 59.105 34.615 32.52 19.69 46.01 1.98
340 341 6.980397 GTCCATAGTTTGGCCAAATTTGATAG 59.020 38.462 32.52 17.94 46.01 2.08
341 342 6.667414 AGTCCATAGTTTGGCCAAATTTGATA 59.333 34.615 32.52 19.55 46.01 2.15
342 343 5.484998 AGTCCATAGTTTGGCCAAATTTGAT 59.515 36.000 32.52 17.27 46.01 2.57
343 344 4.837860 AGTCCATAGTTTGGCCAAATTTGA 59.162 37.500 32.52 21.04 46.01 2.69
344 345 5.151297 AGTCCATAGTTTGGCCAAATTTG 57.849 39.130 32.52 26.08 46.01 2.32
345 346 4.222810 GGAGTCCATAGTTTGGCCAAATTT 59.777 41.667 32.52 24.56 46.01 1.82
346 347 3.769300 GGAGTCCATAGTTTGGCCAAATT 59.231 43.478 32.52 29.53 46.01 1.82
347 348 3.245586 TGGAGTCCATAGTTTGGCCAAAT 60.246 43.478 32.52 22.31 46.01 2.32
348 349 2.109128 TGGAGTCCATAGTTTGGCCAAA 59.891 45.455 27.13 27.13 46.01 3.28
349 350 1.707989 TGGAGTCCATAGTTTGGCCAA 59.292 47.619 16.05 16.05 46.01 4.52
350 351 1.367346 TGGAGTCCATAGTTTGGCCA 58.633 50.000 8.12 0.00 46.01 5.36
351 352 2.736670 ATGGAGTCCATAGTTTGGCC 57.263 50.000 23.67 0.00 43.19 5.36
352 353 7.519970 CGTTAATAATGGAGTCCATAGTTTGGC 60.520 40.741 25.09 11.59 44.40 4.52
353 354 7.041372 CCGTTAATAATGGAGTCCATAGTTTGG 60.041 40.741 25.09 17.90 44.40 3.28
354 355 7.713507 TCCGTTAATAATGGAGTCCATAGTTTG 59.286 37.037 25.09 14.04 44.40 2.93
355 356 7.798071 TCCGTTAATAATGGAGTCCATAGTTT 58.202 34.615 25.09 18.91 44.40 2.66
356 357 7.369551 TCCGTTAATAATGGAGTCCATAGTT 57.630 36.000 25.09 21.94 44.40 2.24
357 358 6.989155 TCCGTTAATAATGGAGTCCATAGT 57.011 37.500 25.09 13.07 44.40 2.12
367 368 6.055588 AGGTGTCAAGATCCGTTAATAATGG 58.944 40.000 4.90 4.90 39.00 3.16
368 369 6.074302 CGAGGTGTCAAGATCCGTTAATAATG 60.074 42.308 0.00 0.00 0.00 1.90
369 370 5.983720 CGAGGTGTCAAGATCCGTTAATAAT 59.016 40.000 0.00 0.00 0.00 1.28
370 371 5.125900 TCGAGGTGTCAAGATCCGTTAATAA 59.874 40.000 0.00 0.00 0.00 1.40
371 372 4.641541 TCGAGGTGTCAAGATCCGTTAATA 59.358 41.667 0.00 0.00 0.00 0.98
372 373 3.446161 TCGAGGTGTCAAGATCCGTTAAT 59.554 43.478 0.00 0.00 0.00 1.40
373 374 2.821378 TCGAGGTGTCAAGATCCGTTAA 59.179 45.455 0.00 0.00 0.00 2.01
374 375 2.439409 TCGAGGTGTCAAGATCCGTTA 58.561 47.619 0.00 0.00 0.00 3.18
375 376 1.254026 TCGAGGTGTCAAGATCCGTT 58.746 50.000 0.00 0.00 0.00 4.44
376 377 1.405821 GATCGAGGTGTCAAGATCCGT 59.594 52.381 0.00 0.00 34.90 4.69
377 378 1.405463 TGATCGAGGTGTCAAGATCCG 59.595 52.381 0.00 0.00 38.85 4.18
378 379 3.526931 TTGATCGAGGTGTCAAGATCC 57.473 47.619 0.00 0.00 38.85 3.36
379 380 5.355596 AGAATTGATCGAGGTGTCAAGATC 58.644 41.667 5.51 6.26 37.72 2.75
380 381 5.350504 AGAATTGATCGAGGTGTCAAGAT 57.649 39.130 5.51 0.00 37.72 2.40
381 382 4.808414 AGAATTGATCGAGGTGTCAAGA 57.192 40.909 5.51 0.00 37.72 3.02
382 383 5.869753 AAAGAATTGATCGAGGTGTCAAG 57.130 39.130 5.51 0.00 37.72 3.02
383 384 7.737972 TTAAAAGAATTGATCGAGGTGTCAA 57.262 32.000 1.91 1.91 38.57 3.18
384 385 7.824289 AGATTAAAAGAATTGATCGAGGTGTCA 59.176 33.333 0.00 0.00 0.00 3.58
385 386 8.202745 AGATTAAAAGAATTGATCGAGGTGTC 57.797 34.615 0.00 0.00 0.00 3.67
386 387 8.043710 AGAGATTAAAAGAATTGATCGAGGTGT 58.956 33.333 0.00 0.00 0.00 4.16
387 388 8.333908 CAGAGATTAAAAGAATTGATCGAGGTG 58.666 37.037 0.00 0.00 0.00 4.00
388 389 7.497249 CCAGAGATTAAAAGAATTGATCGAGGT 59.503 37.037 0.00 0.00 0.00 3.85
389 390 7.041508 CCCAGAGATTAAAAGAATTGATCGAGG 60.042 40.741 0.00 0.00 0.00 4.63
390 391 7.519649 GCCCAGAGATTAAAAGAATTGATCGAG 60.520 40.741 0.00 0.00 0.00 4.04
391 392 6.260936 GCCCAGAGATTAAAAGAATTGATCGA 59.739 38.462 0.00 0.00 0.00 3.59
392 393 6.433766 GCCCAGAGATTAAAAGAATTGATCG 58.566 40.000 0.00 0.00 0.00 3.69
393 394 6.548993 AGGCCCAGAGATTAAAAGAATTGATC 59.451 38.462 0.00 0.00 0.00 2.92
394 395 6.438620 AGGCCCAGAGATTAAAAGAATTGAT 58.561 36.000 0.00 0.00 0.00 2.57
395 396 5.831103 AGGCCCAGAGATTAAAAGAATTGA 58.169 37.500 0.00 0.00 0.00 2.57
396 397 6.406288 GGAAGGCCCAGAGATTAAAAGAATTG 60.406 42.308 0.00 0.00 34.14 2.32
397 398 5.658634 GGAAGGCCCAGAGATTAAAAGAATT 59.341 40.000 0.00 0.00 34.14 2.17
398 399 5.204292 GGAAGGCCCAGAGATTAAAAGAAT 58.796 41.667 0.00 0.00 34.14 2.40
399 400 4.600062 GGAAGGCCCAGAGATTAAAAGAA 58.400 43.478 0.00 0.00 34.14 2.52
400 401 4.236527 GGAAGGCCCAGAGATTAAAAGA 57.763 45.455 0.00 0.00 34.14 2.52
414 415 2.501261 GACGGTATTATTGGGAAGGCC 58.499 52.381 0.00 0.00 0.00 5.19
415 416 2.140717 CGACGGTATTATTGGGAAGGC 58.859 52.381 0.00 0.00 0.00 4.35
416 417 2.366266 TCCGACGGTATTATTGGGAAGG 59.634 50.000 14.79 0.00 0.00 3.46
417 418 3.387397 GTCCGACGGTATTATTGGGAAG 58.613 50.000 14.79 0.00 0.00 3.46
418 419 2.102925 GGTCCGACGGTATTATTGGGAA 59.897 50.000 14.79 0.00 0.00 3.97
419 420 1.688197 GGTCCGACGGTATTATTGGGA 59.312 52.381 14.79 0.00 0.00 4.37
420 421 1.603678 CGGTCCGACGGTATTATTGGG 60.604 57.143 14.79 0.00 0.00 4.12
421 422 1.067516 ACGGTCCGACGGTATTATTGG 59.932 52.381 20.51 0.00 38.39 3.16
422 423 2.121786 CACGGTCCGACGGTATTATTG 58.878 52.381 20.51 0.00 38.39 1.90
423 424 1.067516 CCACGGTCCGACGGTATTATT 59.932 52.381 20.51 0.00 38.39 1.40
424 425 0.670162 CCACGGTCCGACGGTATTAT 59.330 55.000 20.51 0.00 38.39 1.28
425 426 0.393673 TCCACGGTCCGACGGTATTA 60.394 55.000 20.51 0.00 38.39 0.98
426 427 1.678635 TCCACGGTCCGACGGTATT 60.679 57.895 20.51 0.00 38.39 1.89
427 428 2.045045 TCCACGGTCCGACGGTAT 60.045 61.111 20.51 0.00 38.39 2.73
428 429 3.055719 GTCCACGGTCCGACGGTA 61.056 66.667 20.51 5.55 38.39 4.02
431 432 4.415332 CAGGTCCACGGTCCGACG 62.415 72.222 20.51 8.43 40.31 5.12
432 433 2.760387 GAACAGGTCCACGGTCCGAC 62.760 65.000 20.51 5.57 0.00 4.79
433 434 2.522436 AACAGGTCCACGGTCCGA 60.522 61.111 20.51 0.00 0.00 4.55
434 435 2.048503 GAACAGGTCCACGGTCCG 60.049 66.667 10.48 10.48 0.00 4.79
435 436 2.346365 GGAACAGGTCCACGGTCC 59.654 66.667 0.00 0.00 46.97 4.46
443 444 2.100631 CGATGCCGTGGAACAGGTC 61.101 63.158 0.00 0.00 43.44 3.85
444 445 2.047274 CGATGCCGTGGAACAGGT 60.047 61.111 0.00 0.00 43.44 4.00
445 446 1.811266 CTCGATGCCGTGGAACAGG 60.811 63.158 0.00 0.00 41.80 4.00
446 447 3.786101 CTCGATGCCGTGGAACAG 58.214 61.111 0.00 0.00 41.80 3.16
452 453 2.154854 ATGTTATCCTCGATGCCGTG 57.845 50.000 0.00 0.00 37.05 4.94
453 454 2.872245 CAAATGTTATCCTCGATGCCGT 59.128 45.455 0.00 0.00 37.05 5.68
454 455 3.130633 TCAAATGTTATCCTCGATGCCG 58.869 45.455 0.00 0.00 37.07 5.69
455 456 4.576463 ACTTCAAATGTTATCCTCGATGCC 59.424 41.667 0.00 0.00 0.00 4.40
456 457 5.505286 CACTTCAAATGTTATCCTCGATGC 58.495 41.667 0.00 0.00 0.00 3.91
457 458 5.065090 TGCACTTCAAATGTTATCCTCGATG 59.935 40.000 0.00 0.00 0.00 3.84
458 459 5.185454 TGCACTTCAAATGTTATCCTCGAT 58.815 37.500 0.00 0.00 0.00 3.59
459 460 4.574892 TGCACTTCAAATGTTATCCTCGA 58.425 39.130 0.00 0.00 0.00 4.04
460 461 4.944962 TGCACTTCAAATGTTATCCTCG 57.055 40.909 0.00 0.00 0.00 4.63
461 462 5.088739 CGTTGCACTTCAAATGTTATCCTC 58.911 41.667 0.00 0.00 36.26 3.71
462 463 4.615912 GCGTTGCACTTCAAATGTTATCCT 60.616 41.667 0.00 0.00 36.26 3.24
463 464 3.608073 GCGTTGCACTTCAAATGTTATCC 59.392 43.478 0.00 0.00 36.26 2.59
464 465 3.608073 GGCGTTGCACTTCAAATGTTATC 59.392 43.478 0.00 0.00 36.26 1.75
465 466 3.574614 GGCGTTGCACTTCAAATGTTAT 58.425 40.909 0.00 0.00 36.26 1.89
466 467 2.287909 GGGCGTTGCACTTCAAATGTTA 60.288 45.455 0.00 0.00 36.26 2.41
467 468 1.537990 GGGCGTTGCACTTCAAATGTT 60.538 47.619 0.00 0.00 36.26 2.71
468 469 0.031994 GGGCGTTGCACTTCAAATGT 59.968 50.000 0.00 0.00 36.26 2.71
469 470 0.667184 GGGGCGTTGCACTTCAAATG 60.667 55.000 0.00 0.00 36.26 2.32
470 471 1.112315 TGGGGCGTTGCACTTCAAAT 61.112 50.000 0.00 0.00 36.26 2.32
471 472 1.323271 TTGGGGCGTTGCACTTCAAA 61.323 50.000 0.00 0.00 36.26 2.69
472 473 1.323271 TTTGGGGCGTTGCACTTCAA 61.323 50.000 0.00 0.00 29.71 2.69
473 474 1.754621 TTTGGGGCGTTGCACTTCA 60.755 52.632 0.00 0.00 29.71 3.02
474 475 1.299850 GTTTGGGGCGTTGCACTTC 60.300 57.895 0.00 0.00 29.71 3.01
475 476 2.811799 GTTTGGGGCGTTGCACTT 59.188 55.556 0.00 0.00 29.71 3.16
476 477 3.591835 CGTTTGGGGCGTTGCACT 61.592 61.111 0.00 0.00 29.71 4.40
477 478 3.127352 TTCGTTTGGGGCGTTGCAC 62.127 57.895 0.00 0.00 0.00 4.57
478 479 2.829003 TTCGTTTGGGGCGTTGCA 60.829 55.556 0.00 0.00 0.00 4.08
479 480 2.354188 GTTCGTTTGGGGCGTTGC 60.354 61.111 0.00 0.00 0.00 4.17
480 481 1.298788 GTGTTCGTTTGGGGCGTTG 60.299 57.895 0.00 0.00 0.00 4.10
481 482 2.825975 CGTGTTCGTTTGGGGCGTT 61.826 57.895 0.00 0.00 0.00 4.84
482 483 3.273834 CGTGTTCGTTTGGGGCGT 61.274 61.111 0.00 0.00 0.00 5.68
492 493 2.427169 CAAACTGTTCACACGTGTTCG 58.573 47.619 20.79 9.29 43.34 3.95
493 494 2.160813 ACCAAACTGTTCACACGTGTTC 59.839 45.455 20.79 12.93 0.00 3.18
494 495 2.156098 ACCAAACTGTTCACACGTGTT 58.844 42.857 20.79 0.00 0.00 3.32
495 496 1.816074 ACCAAACTGTTCACACGTGT 58.184 45.000 17.22 17.22 0.00 4.49
496 497 2.780993 GAACCAAACTGTTCACACGTG 58.219 47.619 15.48 15.48 43.27 4.49
497 498 1.395608 CGAACCAAACTGTTCACACGT 59.604 47.619 0.00 0.00 43.84 4.49
498 499 1.267832 CCGAACCAAACTGTTCACACG 60.268 52.381 0.00 0.00 43.84 4.49
499 500 1.741145 ACCGAACCAAACTGTTCACAC 59.259 47.619 0.00 0.00 43.84 3.82
500 501 1.740585 CACCGAACCAAACTGTTCACA 59.259 47.619 0.00 0.00 43.84 3.58
501 502 1.533129 GCACCGAACCAAACTGTTCAC 60.533 52.381 0.00 0.00 43.84 3.18
502 503 0.736053 GCACCGAACCAAACTGTTCA 59.264 50.000 0.00 0.00 43.84 3.18
503 504 1.002792 GAGCACCGAACCAAACTGTTC 60.003 52.381 0.00 0.00 40.96 3.18
504 505 1.021968 GAGCACCGAACCAAACTGTT 58.978 50.000 0.00 0.00 0.00 3.16
505 506 0.180406 AGAGCACCGAACCAAACTGT 59.820 50.000 0.00 0.00 0.00 3.55
506 507 0.868406 GAGAGCACCGAACCAAACTG 59.132 55.000 0.00 0.00 0.00 3.16
507 508 0.468226 TGAGAGCACCGAACCAAACT 59.532 50.000 0.00 0.00 0.00 2.66
508 509 0.868406 CTGAGAGCACCGAACCAAAC 59.132 55.000 0.00 0.00 0.00 2.93
509 510 0.468226 ACTGAGAGCACCGAACCAAA 59.532 50.000 0.00 0.00 0.00 3.28
510 511 1.334160 TACTGAGAGCACCGAACCAA 58.666 50.000 0.00 0.00 0.00 3.67
511 512 1.476891 GATACTGAGAGCACCGAACCA 59.523 52.381 0.00 0.00 0.00 3.67
512 513 1.751924 AGATACTGAGAGCACCGAACC 59.248 52.381 0.00 0.00 0.00 3.62
513 514 2.423892 TGAGATACTGAGAGCACCGAAC 59.576 50.000 0.00 0.00 0.00 3.95
514 515 2.423892 GTGAGATACTGAGAGCACCGAA 59.576 50.000 0.00 0.00 0.00 4.30
515 516 2.017782 GTGAGATACTGAGAGCACCGA 58.982 52.381 0.00 0.00 0.00 4.69
516 517 1.066303 GGTGAGATACTGAGAGCACCG 59.934 57.143 0.00 0.00 36.77 4.94
517 518 1.410882 GGGTGAGATACTGAGAGCACC 59.589 57.143 0.00 0.00 43.74 5.01
518 519 1.410882 GGGGTGAGATACTGAGAGCAC 59.589 57.143 0.00 0.00 0.00 4.40
519 520 1.689575 GGGGGTGAGATACTGAGAGCA 60.690 57.143 0.00 0.00 0.00 4.26
520 521 1.044611 GGGGGTGAGATACTGAGAGC 58.955 60.000 0.00 0.00 0.00 4.09
521 522 2.461300 TGGGGGTGAGATACTGAGAG 57.539 55.000 0.00 0.00 0.00 3.20
522 523 2.940514 TTGGGGGTGAGATACTGAGA 57.059 50.000 0.00 0.00 0.00 3.27
523 524 2.774234 ACATTGGGGGTGAGATACTGAG 59.226 50.000 0.00 0.00 0.00 3.35
524 525 2.845659 ACATTGGGGGTGAGATACTGA 58.154 47.619 0.00 0.00 0.00 3.41
525 526 3.652057 AACATTGGGGGTGAGATACTG 57.348 47.619 0.00 0.00 0.00 2.74
526 527 4.788617 AGTAAACATTGGGGGTGAGATACT 59.211 41.667 0.00 0.00 0.00 2.12
527 528 5.112129 AGTAAACATTGGGGGTGAGATAC 57.888 43.478 0.00 0.00 0.00 2.24
528 529 5.505780 CAAGTAAACATTGGGGGTGAGATA 58.494 41.667 0.00 0.00 0.00 1.98
529 530 4.344104 CAAGTAAACATTGGGGGTGAGAT 58.656 43.478 0.00 0.00 0.00 2.75
530 531 3.761897 CAAGTAAACATTGGGGGTGAGA 58.238 45.455 0.00 0.00 0.00 3.27
531 532 2.231235 GCAAGTAAACATTGGGGGTGAG 59.769 50.000 0.00 0.00 0.00 3.51
532 533 2.243810 GCAAGTAAACATTGGGGGTGA 58.756 47.619 0.00 0.00 0.00 4.02
533 534 1.275010 GGCAAGTAAACATTGGGGGTG 59.725 52.381 0.00 0.00 0.00 4.61
534 535 1.639722 GGCAAGTAAACATTGGGGGT 58.360 50.000 0.00 0.00 0.00 4.95
535 536 0.901827 GGGCAAGTAAACATTGGGGG 59.098 55.000 0.00 0.00 0.00 5.40
536 537 1.824852 GAGGGCAAGTAAACATTGGGG 59.175 52.381 0.00 0.00 0.00 4.96
592 593 0.176219 TCCCACTAAACCATACGGCG 59.824 55.000 4.80 4.80 34.57 6.46
601 602 5.816258 GGTTAATGTAGCTCTCCCACTAAAC 59.184 44.000 0.00 0.00 0.00 2.01
602 603 5.486063 TGGTTAATGTAGCTCTCCCACTAAA 59.514 40.000 0.00 0.00 0.00 1.85
613 614 7.834181 ACAATTAGATGGTTGGTTAATGTAGCT 59.166 33.333 0.00 0.00 0.00 3.32
615 616 8.405531 CCACAATTAGATGGTTGGTTAATGTAG 58.594 37.037 0.00 0.00 0.00 2.74
628 629 3.543680 AGACCGACCACAATTAGATGG 57.456 47.619 1.87 1.87 42.13 3.51
629 630 5.661458 ACTAAGACCGACCACAATTAGATG 58.339 41.667 0.00 0.00 0.00 2.90
630 631 5.934402 ACTAAGACCGACCACAATTAGAT 57.066 39.130 0.00 0.00 0.00 1.98
631 632 5.733620 AACTAAGACCGACCACAATTAGA 57.266 39.130 0.00 0.00 0.00 2.10
632 633 7.762615 TGATTAACTAAGACCGACCACAATTAG 59.237 37.037 0.00 0.00 0.00 1.73
638 639 5.522824 GGATTGATTAACTAAGACCGACCAC 59.477 44.000 0.00 0.00 0.00 4.16
670 671 5.909139 GTGTATGACACGTGGACCAACCA 62.909 52.174 21.57 11.76 42.02 3.67
671 672 1.270412 TGTATGACACGTGGACCAACC 60.270 52.381 21.57 9.59 39.54 3.77
672 673 1.796459 GTGTATGACACGTGGACCAAC 59.204 52.381 21.57 11.39 39.53 3.77
673 674 2.157834 GTGTATGACACGTGGACCAA 57.842 50.000 21.57 0.19 39.53 3.67
674 675 3.898380 GTGTATGACACGTGGACCA 57.102 52.632 21.57 14.64 39.53 4.02
684 685 1.207329 GACCTGACCTGGGTGTATGAC 59.793 57.143 0.00 0.00 37.17 3.06
686 687 1.208052 CTGACCTGACCTGGGTGTATG 59.792 57.143 0.00 0.00 37.17 2.39
759 771 2.815647 GGGGAGAGCAAACGAGCG 60.816 66.667 0.00 0.00 40.15 5.03
849 869 2.048597 TTCACGCGCGAATCCACT 60.049 55.556 39.36 9.38 0.00 4.00
851 871 0.800683 CTACTTCACGCGCGAATCCA 60.801 55.000 39.36 15.22 0.00 3.41
853 873 1.448677 GATCTACTTCACGCGCGAATC 59.551 52.381 39.36 19.09 0.00 2.52
854 874 1.478137 GATCTACTTCACGCGCGAAT 58.522 50.000 39.36 13.15 0.00 3.34
860 880 0.454600 TGACGGGATCTACTTCACGC 59.545 55.000 0.00 0.00 46.38 5.34
862 882 3.004944 GGATCTGACGGGATCTACTTCAC 59.995 52.174 12.55 0.00 41.15 3.18
866 886 2.175931 ACAGGATCTGACGGGATCTACT 59.824 50.000 12.55 3.26 41.15 2.57
871 891 2.900546 GGAATACAGGATCTGACGGGAT 59.099 50.000 1.59 0.00 35.18 3.85
902 922 6.909550 ATTAGGAAGAGAGCGAATCTATGT 57.090 37.500 0.00 0.00 38.84 2.29
925 946 8.097038 GGGAACAGATGCAGAATATGAGTATAA 58.903 37.037 0.00 0.00 31.62 0.98
926 947 7.577616 CGGGAACAGATGCAGAATATGAGTATA 60.578 40.741 0.00 0.00 31.62 1.47
927 948 6.471146 GGGAACAGATGCAGAATATGAGTAT 58.529 40.000 0.00 0.00 31.62 2.12
928 949 5.509670 CGGGAACAGATGCAGAATATGAGTA 60.510 44.000 0.00 0.00 31.62 2.59
929 950 4.712476 GGGAACAGATGCAGAATATGAGT 58.288 43.478 0.00 0.00 31.62 3.41
930 951 3.744942 CGGGAACAGATGCAGAATATGAG 59.255 47.826 0.00 0.00 31.62 2.90
931 952 3.134623 ACGGGAACAGATGCAGAATATGA 59.865 43.478 0.00 0.00 31.62 2.15
932 953 3.470709 ACGGGAACAGATGCAGAATATG 58.529 45.455 0.00 0.00 33.49 1.78
936 957 3.244422 ACTTTACGGGAACAGATGCAGAA 60.244 43.478 0.00 0.00 0.00 3.02
949 970 7.263496 ACAAAGAGCTAGTATTACTTTACGGG 58.737 38.462 0.85 0.00 31.11 5.28
962 983 5.985530 GCCAAAATCAAAACAAAGAGCTAGT 59.014 36.000 0.00 0.00 0.00 2.57
965 986 3.803778 CGCCAAAATCAAAACAAAGAGCT 59.196 39.130 0.00 0.00 0.00 4.09
1047 1068 2.979197 CTCGTCGAGCTTCCGTGGT 61.979 63.158 9.74 0.00 0.00 4.16
1108 1129 1.150081 GGTGCCTGATCCCATCCAG 59.850 63.158 0.00 0.00 0.00 3.86
1407 1442 2.115911 CCAGTACCTCTCGCTCGCT 61.116 63.158 0.00 0.00 0.00 4.93
1434 1469 1.825285 CGGAGGCGCAATCATCGAAG 61.825 60.000 10.83 0.00 0.00 3.79
1847 1895 7.335627 TGTAGTGTAAATTCCTGAATAGGTGG 58.664 38.462 0.00 0.00 44.88 4.61
1868 1916 9.676195 CTCTCACATTATCTTGTAGTCATGTAG 57.324 37.037 0.00 0.00 0.00 2.74
1871 1919 7.866898 CCTCTCTCACATTATCTTGTAGTCATG 59.133 40.741 0.00 0.00 0.00 3.07
1872 1920 7.471260 GCCTCTCTCACATTATCTTGTAGTCAT 60.471 40.741 0.00 0.00 0.00 3.06
1873 1921 6.183360 GCCTCTCTCACATTATCTTGTAGTCA 60.183 42.308 0.00 0.00 0.00 3.41
1876 1924 6.403866 AGCCTCTCTCACATTATCTTGTAG 57.596 41.667 0.00 0.00 0.00 2.74
1877 1925 6.798427 AAGCCTCTCTCACATTATCTTGTA 57.202 37.500 0.00 0.00 0.00 2.41
1878 1926 5.690464 AAGCCTCTCTCACATTATCTTGT 57.310 39.130 0.00 0.00 0.00 3.16
1879 1927 7.254727 GCTTAAAGCCTCTCTCACATTATCTTG 60.255 40.741 0.00 0.00 34.48 3.02
1880 1928 6.765512 GCTTAAAGCCTCTCTCACATTATCTT 59.234 38.462 0.00 0.00 34.48 2.40
1881 1929 6.099557 AGCTTAAAGCCTCTCTCACATTATCT 59.900 38.462 0.00 0.00 43.77 1.98
1930 2090 8.722394 AGCAAAGTAAAGTCAACTTAGCTTATC 58.278 33.333 0.00 7.12 36.17 1.75
1938 2098 9.569167 GTAAAGAAAGCAAAGTAAAGTCAACTT 57.431 29.630 0.00 0.00 38.82 2.66
1939 2099 8.736244 TGTAAAGAAAGCAAAGTAAAGTCAACT 58.264 29.630 0.00 0.00 0.00 3.16
1940 2100 8.905103 TGTAAAGAAAGCAAAGTAAAGTCAAC 57.095 30.769 0.00 0.00 0.00 3.18
1963 2252 3.067180 CAGACAAACATGGCTCAACTTGT 59.933 43.478 0.00 0.00 0.00 3.16
1975 2264 3.498774 AGCTGAAGTCCAGACAAACAT 57.501 42.857 0.00 0.00 45.78 2.71
1983 2272 3.434984 GCAGAAGTTAAGCTGAAGTCCAG 59.565 47.826 0.00 0.00 45.67 3.86
2037 2326 9.841295 GTCACCCATTAAGAAGTATATTAACCA 57.159 33.333 0.00 0.00 0.00 3.67
2062 2351 9.612066 ACTTTTCATGAACCACAATTTTTATGT 57.388 25.926 7.89 0.00 0.00 2.29
2110 2399 3.063045 CACCGCGATCCAATATGATGATG 59.937 47.826 8.23 0.00 0.00 3.07
2111 2400 3.264947 CACCGCGATCCAATATGATGAT 58.735 45.455 8.23 0.00 0.00 2.45
2123 2412 1.922135 AATGCACAACCACCGCGATC 61.922 55.000 8.23 0.00 0.00 3.69
2169 2486 8.561738 TTAGATCATTAGTTTCTTTGGGACAC 57.438 34.615 0.00 0.00 39.29 3.67
2254 2580 6.131544 AGTACCTGGCAAATAATTTAAGCG 57.868 37.500 0.00 0.00 0.00 4.68
2295 2621 1.676916 CCACACTGATGTAGCCCACAG 60.677 57.143 0.00 0.00 41.51 3.66
2414 2743 6.325993 TCCATCTGAAAAATATGGTCAGGA 57.674 37.500 9.50 0.00 40.88 3.86
2453 2782 5.698832 TGGAGCAATAATTTTTGTGAGTCG 58.301 37.500 9.87 0.00 0.00 4.18
2484 2813 5.696724 GTCGAGGACTTTGATTTTCTGAGAA 59.303 40.000 0.00 0.00 0.00 2.87
2506 2838 5.119588 TGAGGTAAAATGTGATCGAAACGTC 59.880 40.000 0.00 0.00 0.00 4.34
2702 3046 4.202274 TGTGGAAGACAATCGAACCTAACA 60.202 41.667 0.00 0.00 0.00 2.41
2887 3231 4.927049 CATAACTTGGATCAGGCCCATAT 58.073 43.478 0.00 0.00 33.04 1.78
2914 3258 9.998106 AAGACAATAGTTCATAACTGTAGTTGT 57.002 29.630 7.50 7.98 42.84 3.32
2930 3274 6.013725 TGTGGTGGACTGAATAAGACAATAGT 60.014 38.462 0.00 0.00 0.00 2.12
2973 3317 8.485976 AAGTTCTCTTCAATAGACTTGTATGC 57.514 34.615 0.00 0.00 0.00 3.14
3182 3526 5.725362 AGATGAAGGTTTAGAACTCGAAGG 58.275 41.667 0.00 0.00 0.00 3.46
3233 3577 6.601613 ACAGTTCACAAATTCTTGTAAGGTCA 59.398 34.615 0.00 0.00 44.15 4.02
3387 3731 2.260869 GCAACAAGCTCGGAAGGCA 61.261 57.895 0.00 0.00 41.15 4.75
3671 4018 2.927477 GCCATCAACGAGAACAACGATA 59.073 45.455 0.00 0.00 34.70 2.92
3674 4021 1.126846 GAGCCATCAACGAGAACAACG 59.873 52.381 0.00 0.00 0.00 4.10
3834 4181 4.751600 TGTGAGGATATCAATGTCATTCGC 59.248 41.667 4.83 0.00 40.43 4.70
3983 4330 2.144833 TTGCACCTGCCATGAAAGCG 62.145 55.000 0.00 0.00 41.18 4.68
3998 4345 3.889815 CCTCTGAAGATTGGGTATTGCA 58.110 45.455 0.00 0.00 0.00 4.08
4004 4351 1.558756 CTGAGCCTCTGAAGATTGGGT 59.441 52.381 0.00 0.00 0.00 4.51
4024 4371 5.611374 TGGTATGAGTATTGAAAGCTAGCC 58.389 41.667 12.13 0.00 0.00 3.93
4114 4461 5.245075 TCAAATTTGGTGACTACCCCAATTC 59.755 40.000 17.90 0.00 46.96 2.17
4131 4478 2.298163 CAGCAGCCCTTCTGTCAAATTT 59.702 45.455 0.00 0.00 44.66 1.82
4135 4482 0.473755 TTCAGCAGCCCTTCTGTCAA 59.526 50.000 0.00 0.00 44.66 3.18
4198 4545 4.406648 TCCAGCCATTGTACACTAGATG 57.593 45.455 0.00 0.00 0.00 2.90
4215 4562 7.066284 ACGAAATAATTTCTCAACTGGATCCAG 59.934 37.037 35.55 35.55 42.12 3.86
4233 4580 6.038825 TGCTGTTTTTCTGAAGGACGAAATAA 59.961 34.615 0.00 0.00 0.00 1.40
4296 4643 0.809385 TCGGCTTTCTCTAGACCACG 59.191 55.000 0.00 0.00 0.00 4.94
4298 4645 2.803956 TCTTCGGCTTTCTCTAGACCA 58.196 47.619 0.00 0.00 0.00 4.02
4365 4712 2.863704 GCCAAGTTGCGAAGAATTGCTT 60.864 45.455 0.00 0.00 40.25 3.91
4382 4729 5.307716 AGAAGAAATGAATGAAAAGGGCCAA 59.692 36.000 6.18 0.00 0.00 4.52
4446 4796 3.788227 ACAGTGCAGGAAAATGAGGTA 57.212 42.857 0.00 0.00 0.00 3.08
4450 4800 4.713553 TGTCTTACAGTGCAGGAAAATGA 58.286 39.130 0.00 0.00 0.00 2.57
4486 4870 1.470890 GTTAAGCTATGGTTTGGCGCA 59.529 47.619 10.83 0.00 0.00 6.09
4565 5024 4.691216 AGCGGAAGAAGTTTTACTGATGAC 59.309 41.667 0.00 0.00 0.00 3.06
4608 5067 1.002087 AGTTTCTGTAGGCCTCAACGG 59.998 52.381 9.68 8.66 0.00 4.44
4609 5068 2.028930 AGAGTTTCTGTAGGCCTCAACG 60.029 50.000 9.68 0.00 0.00 4.10
4612 5071 2.972713 ACAAGAGTTTCTGTAGGCCTCA 59.027 45.455 9.68 6.63 0.00 3.86
4613 5072 3.686916 ACAAGAGTTTCTGTAGGCCTC 57.313 47.619 9.68 1.02 0.00 4.70
4648 5107 4.446857 CGTTCTAACACGCTTTTGAAGA 57.553 40.909 0.00 0.00 32.43 2.87
4660 5119 2.096614 GCAAAAGTAGCGCGTTCTAACA 60.097 45.455 8.43 0.00 0.00 2.41
4663 5122 1.785768 TGCAAAAGTAGCGCGTTCTA 58.214 45.000 8.43 0.00 33.85 2.10
4669 5128 4.078363 TCTTGTAATGCAAAAGTAGCGC 57.922 40.909 0.00 0.00 36.53 5.92
4674 5133 4.100808 TGGCCTTTCTTGTAATGCAAAAGT 59.899 37.500 3.32 0.00 36.53 2.66
4686 5145 2.550639 CCCATTTTGGTGGCCTTTCTTG 60.551 50.000 3.32 0.00 37.96 3.02
4708 5167 3.118038 TCTTGGTGGTTCTGTAGCTTTGT 60.118 43.478 0.00 0.00 0.00 2.83
4719 5178 2.037251 TCAGTGCTACTCTTGGTGGTTC 59.963 50.000 0.00 0.00 0.00 3.62
4730 5189 1.542030 CTCAGTTCGGTCAGTGCTACT 59.458 52.381 0.00 0.00 0.00 2.57
4733 5192 0.600557 CTCTCAGTTCGGTCAGTGCT 59.399 55.000 0.00 0.00 0.00 4.40
4750 5209 3.048501 GTTTTGCTGCTCTTTCTTGCTC 58.951 45.455 0.00 0.00 0.00 4.26
4752 5211 2.130395 GGTTTTGCTGCTCTTTCTTGC 58.870 47.619 0.00 0.00 0.00 4.01
4771 5230 4.686554 GCATAATTTAGCGGTGTCTCTAGG 59.313 45.833 0.00 0.00 0.00 3.02
4775 5234 3.621268 TGTGCATAATTTAGCGGTGTCTC 59.379 43.478 0.00 0.00 0.00 3.36
4780 5239 4.013728 TCCTTTGTGCATAATTTAGCGGT 58.986 39.130 0.00 0.00 0.00 5.68
4794 5253 3.594134 TGCTGTTGGTTTTTCCTTTGTG 58.406 40.909 0.00 0.00 37.07 3.33
4836 5295 2.250008 TCCTCTGTCCTATTCCCATCCA 59.750 50.000 0.00 0.00 0.00 3.41
4839 5298 2.641815 GCATCCTCTGTCCTATTCCCAT 59.358 50.000 0.00 0.00 0.00 4.00
4848 5307 2.508526 ACAACTTTGCATCCTCTGTCC 58.491 47.619 0.00 0.00 0.00 4.02
4864 5323 7.078228 GTGATGAAGAAGTGGTATTGAACAAC 58.922 38.462 0.00 0.00 31.39 3.32
4872 5331 7.605449 CAAATTTGGTGATGAAGAAGTGGTAT 58.395 34.615 10.49 0.00 0.00 2.73
4889 5348 4.933400 AGCTAGAATGCTTTGCAAATTTGG 59.067 37.500 19.47 1.79 43.62 3.28
4907 5366 6.806249 GCAGCTACATTCTGATTACTAGCTAG 59.194 42.308 19.44 19.44 35.79 3.42
4908 5367 6.491745 AGCAGCTACATTCTGATTACTAGCTA 59.508 38.462 0.00 0.00 35.79 3.32
4911 5370 6.743110 TCAGCAGCTACATTCTGATTACTAG 58.257 40.000 0.00 0.00 33.54 2.57
4916 5375 3.944015 GGTTCAGCAGCTACATTCTGATT 59.056 43.478 0.00 0.00 35.74 2.57
4922 5381 3.008375 TCTTCAGGTTCAGCAGCTACATT 59.992 43.478 0.00 0.00 0.00 2.71
4923 5382 2.568956 TCTTCAGGTTCAGCAGCTACAT 59.431 45.455 0.00 0.00 0.00 2.29
4924 5383 1.970640 TCTTCAGGTTCAGCAGCTACA 59.029 47.619 0.00 0.00 0.00 2.74
4931 5390 2.008329 CATCTGCTCTTCAGGTTCAGC 58.992 52.381 0.00 0.00 43.06 4.26
5005 5464 1.610522 ACACCAGTTTCAGCAGCAATC 59.389 47.619 0.00 0.00 0.00 2.67
5029 5488 4.642466 TGAGAGAGTAGAGACCTGTGAA 57.358 45.455 0.00 0.00 0.00 3.18
5032 5491 3.804036 CGATGAGAGAGTAGAGACCTGT 58.196 50.000 0.00 0.00 0.00 4.00
5042 5501 1.668751 GAGAGAACGCGATGAGAGAGT 59.331 52.381 15.93 0.00 0.00 3.24
5046 5505 1.468224 GCAAGAGAGAACGCGATGAGA 60.468 52.381 15.93 0.00 0.00 3.27
5064 5523 2.238646 CCATAGAGGTACCTTGTTGGCA 59.761 50.000 17.53 0.00 40.22 4.92
5065 5524 2.919228 CCATAGAGGTACCTTGTTGGC 58.081 52.381 17.53 1.37 40.22 4.52
5066 5525 2.505819 AGCCATAGAGGTACCTTGTTGG 59.494 50.000 23.70 23.70 40.61 3.77
5069 5528 3.197983 GTCAAGCCATAGAGGTACCTTGT 59.802 47.826 17.53 9.44 40.61 3.16
5089 5548 7.809806 CAGTGATGGAAATTTTTAAGTGGAGTC 59.190 37.037 0.00 0.00 0.00 3.36
5092 5551 7.595819 ACAGTGATGGAAATTTTTAAGTGGA 57.404 32.000 0.00 0.00 0.00 4.02
5103 5562 7.977853 GCAAAAGATTCATACAGTGATGGAAAT 59.022 33.333 0.00 0.00 36.54 2.17
5106 5565 5.357878 GGCAAAAGATTCATACAGTGATGGA 59.642 40.000 0.00 0.00 36.54 3.41
5113 5572 6.748333 TCTTCAGGCAAAAGATTCATACAG 57.252 37.500 0.00 0.00 0.00 2.74
5179 5638 1.984424 AGAAGCAGGCTCTCCTTCTTT 59.016 47.619 13.09 0.00 44.28 2.52
5180 5639 1.655372 AGAAGCAGGCTCTCCTTCTT 58.345 50.000 13.09 0.00 46.39 2.52
5181 5640 2.387757 CTAGAAGCAGGCTCTCCTTCT 58.612 52.381 19.38 19.38 45.18 2.85
5192 5651 3.118811 AGCTAAGTTGAGCCTAGAAGCAG 60.119 47.826 0.00 0.00 43.97 4.24
5200 5659 1.944177 TCTCCAGCTAAGTTGAGCCT 58.056 50.000 0.00 0.00 43.97 4.58
5223 5682 3.447229 TGATGTTTGAGCTCATCTCCGTA 59.553 43.478 19.04 0.00 41.18 4.02
5247 5706 5.258051 ACCAAATTTATTACCTGCTTCCGA 58.742 37.500 0.00 0.00 0.00 4.55
5248 5707 5.576447 ACCAAATTTATTACCTGCTTCCG 57.424 39.130 0.00 0.00 0.00 4.30
5249 5708 6.593770 CCAAACCAAATTTATTACCTGCTTCC 59.406 38.462 0.00 0.00 0.00 3.46
5260 5719 6.888105 CCAGAATAGGCCAAACCAAATTTAT 58.112 36.000 5.01 0.00 43.14 1.40
5261 5720 6.293004 CCAGAATAGGCCAAACCAAATTTA 57.707 37.500 5.01 0.00 43.14 1.40
5280 5741 2.750814 TCAGATCACCTATGTGCCAGA 58.249 47.619 0.00 0.00 42.46 3.86
5291 5752 5.668471 TCTTCATCAGAACATCAGATCACC 58.332 41.667 0.00 0.00 0.00 4.02
5299 5760 5.526846 GTGGAAGGATCTTCATCAGAACATC 59.473 44.000 9.48 0.00 34.16 3.06
5304 5765 4.750021 CTGTGGAAGGATCTTCATCAGA 57.250 45.455 17.55 5.25 35.33 3.27
5317 5778 5.762218 CCTTAGCAAGAATATCCTGTGGAAG 59.238 44.000 0.00 0.00 34.34 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.