Multiple sequence alignment - TraesCS7D01G450500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G450500 chr7D 100.000 2570 0 0 1 2570 569455826 569453257 0.000000e+00 4747.0
1 TraesCS7D01G450500 chr7D 92.256 749 52 3 196 944 569708895 569708153 0.000000e+00 1057.0
2 TraesCS7D01G450500 chr7D 82.930 703 61 35 1332 2000 569706842 569706165 1.710000e-161 579.0
3 TraesCS7D01G450500 chr7D 86.311 431 47 9 1376 1802 570237185 570236763 2.330000e-125 459.0
4 TraesCS7D01G450500 chr7D 83.539 486 43 15 1332 1804 569403635 569403174 1.100000e-113 420.0
5 TraesCS7D01G450500 chr7D 89.272 261 16 2 1335 1595 569585684 569585436 1.480000e-82 316.0
6 TraesCS7D01G450500 chr7D 87.313 268 29 3 1376 1643 569504276 569504014 4.160000e-78 302.0
7 TraesCS7D01G450500 chr7D 90.129 233 22 1 1376 1608 570243378 570243147 4.160000e-78 302.0
8 TraesCS7D01G450500 chr7D 86.940 268 30 3 1376 1643 569555546 569555284 1.930000e-76 296.0
9 TraesCS7D01G450500 chr7D 86.940 268 30 3 1376 1643 569577140 569576878 1.930000e-76 296.0
10 TraesCS7D01G450500 chr7D 87.085 271 17 4 1332 1602 569230778 569230526 9.000000e-75 291.0
11 TraesCS7D01G450500 chr7D 86.194 268 32 3 1376 1643 569497678 569497416 4.190000e-73 285.0
12 TraesCS7D01G450500 chr7D 92.821 195 12 1 1141 1333 16671573 16671379 5.410000e-72 281.0
13 TraesCS7D01G450500 chr7D 92.386 197 11 3 1141 1333 10039501 10039697 7.000000e-71 278.0
14 TraesCS7D01G450500 chr7D 95.745 141 6 0 961 1101 569708073 569707933 7.150000e-56 228.0
15 TraesCS7D01G450500 chr7D 90.299 134 12 1 1010 1142 569403756 569403623 9.450000e-40 174.0
16 TraesCS7D01G450500 chr7D 90.323 124 11 1 1020 1142 569497822 569497699 7.360000e-36 161.0
17 TraesCS7D01G450500 chr7D 90.323 124 11 1 1020 1142 569540900 569540777 7.360000e-36 161.0
18 TraesCS7D01G450500 chr7D 81.416 226 17 16 2343 2553 570234627 570234412 7.360000e-36 161.0
19 TraesCS7D01G450500 chr7D 88.889 126 7 7 1020 1142 569577282 569577161 5.730000e-32 148.0
20 TraesCS7D01G450500 chr7D 83.439 157 16 7 990 1142 569591317 569591467 1.240000e-28 137.0
21 TraesCS7D01G450500 chr7D 98.592 71 1 0 942 1012 569708125 569708055 2.680000e-25 126.0
22 TraesCS7D01G450500 chr7D 86.364 110 15 0 1029 1138 569590979 569590870 1.250000e-23 121.0
23 TraesCS7D01G450500 chr7D 82.857 140 17 2 1010 1142 569400328 569400189 4.490000e-23 119.0
24 TraesCS7D01G450500 chr7D 80.986 142 18 3 1010 1142 569230907 569230766 1.260000e-18 104.0
25 TraesCS7D01G450500 chr7D 83.871 93 12 2 1735 1827 569560323 569560234 4.560000e-13 86.1
26 TraesCS7D01G450500 chr7D 87.500 80 2 4 2343 2415 570235761 570235683 4.560000e-13 86.1
27 TraesCS7D01G450500 chr7D 90.909 66 1 4 2068 2128 392633187 392633122 1.640000e-12 84.2
28 TraesCS7D01G450500 chr7D 82.796 93 13 2 1735 1827 569584316 569584227 2.120000e-11 80.5
29 TraesCS7D01G450500 chr7D 88.571 70 1 3 2350 2412 570233848 570233779 7.620000e-11 78.7
30 TraesCS7D01G450500 chr7B 95.127 944 46 0 1 944 625983557 625982614 0.000000e+00 1489.0
31 TraesCS7D01G450500 chr7B 87.992 483 35 10 1332 1804 625982394 625981925 1.340000e-152 549.0
32 TraesCS7D01G450500 chr7B 82.780 482 48 17 1332 1803 625972026 625971570 5.150000e-107 398.0
33 TraesCS7D01G450500 chr7B 82.780 482 48 17 1332 1803 625975199 625974743 5.150000e-107 398.0
34 TraesCS7D01G450500 chr7B 95.545 202 8 1 942 1142 625982583 625982382 3.190000e-84 322.0
35 TraesCS7D01G450500 chr7B 87.313 268 29 3 1376 1643 626034999 626034737 4.160000e-78 302.0
36 TraesCS7D01G450500 chr7B 86.415 265 22 4 1332 1596 626051287 626051037 7.000000e-71 278.0
37 TraesCS7D01G450500 chr7B 85.978 271 20 4 1332 1602 625947950 625947698 9.060000e-70 274.0
38 TraesCS7D01G450500 chr7B 93.985 133 7 1 1011 1142 625972146 625972014 1.560000e-47 200.0
39 TraesCS7D01G450500 chr7B 93.985 133 7 1 1011 1142 625975319 625975187 1.560000e-47 200.0
40 TraesCS7D01G450500 chr7B 90.083 121 11 1 1023 1142 626035140 626035020 3.420000e-34 156.0
41 TraesCS7D01G450500 chr7B 92.941 85 6 0 2170 2254 508305259 508305343 9.660000e-25 124.0
42 TraesCS7D01G450500 chr7B 86.667 105 3 5 2343 2440 625981821 625981721 3.500000e-19 106.0
43 TraesCS7D01G450500 chr7B 78.462 195 17 12 2343 2520 625971456 625971270 1.260000e-18 104.0
44 TraesCS7D01G450500 chr7B 78.462 195 17 12 2343 2520 625974629 625974443 1.260000e-18 104.0
45 TraesCS7D01G450500 chr7A 90.601 766 53 3 196 943 576140785 576141549 0.000000e+00 998.0
46 TraesCS7D01G450500 chr7A 91.989 699 43 4 196 894 658830824 658830139 0.000000e+00 968.0
47 TraesCS7D01G450500 chr7A 86.939 490 31 18 1332 1804 658829852 658829379 1.050000e-143 520.0
48 TraesCS7D01G450500 chr7A 85.625 480 44 11 1332 1801 576226124 576226588 4.970000e-132 481.0
49 TraesCS7D01G450500 chr7A 85.270 482 28 17 1332 1800 576141766 576142217 8.380000e-125 457.0
50 TraesCS7D01G450500 chr7A 83.469 490 52 15 1332 1810 576064368 576063897 1.830000e-116 429.0
51 TraesCS7D01G450500 chr7A 83.505 485 44 20 1332 1804 658784025 658783565 1.100000e-113 420.0
52 TraesCS7D01G450500 chr7A 82.968 411 36 16 1332 1732 658985195 658985581 8.810000e-90 340.0
53 TraesCS7D01G450500 chr7A 97.030 202 5 1 942 1142 576141577 576141778 3.170000e-89 339.0
54 TraesCS7D01G450500 chr7A 96.040 202 7 1 942 1142 658830041 658829840 6.860000e-86 327.0
55 TraesCS7D01G450500 chr7A 88.302 265 17 4 1332 1596 658891124 658890874 3.210000e-79 305.0
56 TraesCS7D01G450500 chr7A 87.170 265 20 4 1332 1596 576118937 576119187 3.240000e-74 289.0
57 TraesCS7D01G450500 chr7A 88.053 226 15 2 1332 1557 576191385 576191598 9.120000e-65 257.0
58 TraesCS7D01G450500 chr7A 94.776 134 6 1 1010 1142 658910645 658910512 9.320000e-50 207.0
59 TraesCS7D01G450500 chr7A 94.776 134 6 1 1010 1142 658959952 658959819 9.320000e-50 207.0
60 TraesCS7D01G450500 chr7A 92.424 132 9 1 1012 1142 658930153 658930284 1.210000e-43 187.0
61 TraesCS7D01G450500 chr7A 94.215 121 7 0 942 1062 576214345 576214465 4.370000e-43 185.0
62 TraesCS7D01G450500 chr7A 98.485 66 0 1 879 943 658830134 658830069 5.810000e-22 115.0
63 TraesCS7D01G450500 chr7A 84.091 132 4 1 826 940 576213641 576213772 7.520000e-21 111.0
64 TraesCS7D01G450500 chr7A 79.144 187 16 5 2353 2520 658986001 658986183 9.720000e-20 108.0
65 TraesCS7D01G450500 chr7A 86.667 105 3 5 2343 2440 576226695 576226795 3.500000e-19 106.0
66 TraesCS7D01G450500 chr7A 87.640 89 11 0 1739 1827 575444901 575444813 1.260000e-18 104.0
67 TraesCS7D01G450500 chr7A 89.189 74 4 4 2068 2137 444356290 444356217 3.520000e-14 89.8
68 TraesCS7D01G450500 chr7A 87.500 72 1 4 2348 2412 575454664 575454594 2.740000e-10 76.8
69 TraesCS7D01G450500 chr7A 87.143 70 6 2 1735 1803 576119308 576119375 2.740000e-10 76.8
70 TraesCS7D01G450500 chr7A 83.333 78 5 3 2433 2503 658931102 658931178 5.940000e-07 65.8
71 TraesCS7D01G450500 chr7A 96.970 33 1 0 2343 2375 576142325 576142357 3.570000e-04 56.5
72 TraesCS7D01G450500 chr7A 96.970 33 1 0 2343 2375 658829275 658829243 3.570000e-04 56.5
73 TraesCS7D01G450500 chr5D 98.446 193 3 0 1141 1333 54719411 54719219 8.810000e-90 340.0
74 TraesCS7D01G450500 chr5D 97.462 197 5 0 1 197 349917030 349917226 1.140000e-88 337.0
75 TraesCS7D01G450500 chr5D 96.447 197 6 1 1 196 242529073 242529269 8.870000e-85 324.0
76 TraesCS7D01G450500 chr5D 95.337 193 3 1 1141 1333 467851713 467851899 4.160000e-78 302.0
77 TraesCS7D01G450500 chr5D 91.878 197 12 4 1141 1333 264623402 264623598 3.260000e-69 272.0
78 TraesCS7D01G450500 chr5D 82.394 142 20 4 2009 2145 313786688 313786547 4.490000e-23 119.0
79 TraesCS7D01G450500 chr5D 79.528 127 15 7 2022 2142 537166449 537166328 2.120000e-11 80.5
80 TraesCS7D01G450500 chr5D 84.706 85 6 6 2052 2129 449500495 449500579 7.620000e-11 78.7
81 TraesCS7D01G450500 chr6D 96.465 198 5 2 1 196 68000650 68000453 2.470000e-85 326.0
82 TraesCS7D01G450500 chr6D 96.447 197 6 1 1 196 313143798 313143994 8.870000e-85 324.0
83 TraesCS7D01G450500 chr6D 86.408 103 9 3 2138 2240 459756733 459756636 9.720000e-20 108.0
84 TraesCS7D01G450500 chr6D 88.158 76 6 3 2067 2139 470606482 470606557 1.270000e-13 87.9
85 TraesCS7D01G450500 chr4D 96.447 197 6 1 1 196 85235906 85236102 8.870000e-85 324.0
86 TraesCS7D01G450500 chr4D 96.447 197 6 1 1 196 208843564 208843368 8.870000e-85 324.0
87 TraesCS7D01G450500 chr3D 96.429 196 7 0 1 196 85098486 85098681 8.870000e-85 324.0
88 TraesCS7D01G450500 chr3D 80.537 149 16 6 2004 2139 611666411 611666559 4.520000e-18 102.0
89 TraesCS7D01G450500 chr2D 96.447 197 6 1 1 196 198322969 198323165 8.870000e-85 324.0
90 TraesCS7D01G450500 chr2D 96.891 193 6 0 1141 1333 639725597 639725405 8.870000e-85 324.0
91 TraesCS7D01G450500 chr2D 91.500 200 12 3 1141 1340 548888838 548889032 1.170000e-68 270.0
92 TraesCS7D01G450500 chr2D 91.111 135 11 1 1009 1142 79782012 79781878 5.650000e-42 182.0
93 TraesCS7D01G450500 chr2D 84.459 148 16 4 2004 2145 72619510 72619364 3.450000e-29 139.0
94 TraesCS7D01G450500 chr2D 82.993 147 20 4 2004 2145 72349328 72349182 7.460000e-26 128.0
95 TraesCS7D01G450500 chr1D 95.939 197 4 3 1141 1333 478935039 478935235 1.480000e-82 316.0
96 TraesCS7D01G450500 chr1D 90.385 208 13 4 1144 1345 418271363 418271157 1.520000e-67 267.0
97 TraesCS7D01G450500 chr1D 87.943 141 10 4 2003 2139 341371225 341371362 2.650000e-35 159.0
98 TraesCS7D01G450500 chr2B 88.966 145 10 4 2004 2144 27730950 27731092 9.450000e-40 174.0
99 TraesCS7D01G450500 chr5B 81.159 207 29 8 2138 2338 492002467 492002669 9.520000e-35 158.0
100 TraesCS7D01G450500 chr2A 85.906 149 13 5 2004 2145 71104636 71104489 4.430000e-33 152.0
101 TraesCS7D01G450500 chr2A 86.014 143 16 4 2003 2142 83645003 83644862 1.590000e-32 150.0
102 TraesCS7D01G450500 chr2A 85.816 141 16 3 2004 2142 520623616 520623478 2.060000e-31 147.0
103 TraesCS7D01G450500 chr1B 86.301 146 10 8 2004 2142 378977833 378977691 1.590000e-32 150.0
104 TraesCS7D01G450500 chr1B 82.639 144 17 3 2004 2145 590485127 590484990 1.250000e-23 121.0
105 TraesCS7D01G450500 chr1B 78.616 159 16 7 2004 2145 58422140 58421983 3.520000e-14 89.8
106 TraesCS7D01G450500 chr4B 86.207 145 9 9 2005 2142 172930120 172930260 2.060000e-31 147.0
107 TraesCS7D01G450500 chr4B 87.640 89 7 3 2052 2138 351878536 351878450 1.630000e-17 100.0
108 TraesCS7D01G450500 chr3A 81.633 147 16 6 2004 2139 746410548 746410694 7.520000e-21 111.0
109 TraesCS7D01G450500 chr3A 79.439 107 19 3 2004 2107 492050045 492049939 3.550000e-09 73.1
110 TraesCS7D01G450500 chr6B 94.737 38 2 0 2004 2041 576431946 576431983 2.760000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G450500 chr7D 569453257 569455826 2569 True 4747.000000 4747 100.000000 1 2570 1 chr7D.!!$R3 2569
1 TraesCS7D01G450500 chr7D 569706165 569708895 2730 True 497.500000 1057 92.380750 196 2000 4 chr7D.!!$R15 1804
2 TraesCS7D01G450500 chr7D 569400189 569403756 3567 True 237.666667 420 85.565000 1010 1804 3 chr7D.!!$R11 794
3 TraesCS7D01G450500 chr7B 625981721 625983557 1836 True 616.500000 1489 91.332750 1 2440 4 chr7B.!!$R4 2439
4 TraesCS7D01G450500 chr7B 625971270 625975319 4049 True 234.000000 398 85.075667 1011 2520 6 chr7B.!!$R3 1509
5 TraesCS7D01G450500 chr7A 576140785 576142357 1572 False 462.625000 998 92.467750 196 2375 4 chr7A.!!$F3 2179
6 TraesCS7D01G450500 chr7A 658829243 658830824 1581 True 397.300000 968 94.084600 196 2375 5 chr7A.!!$R9 2179
7 TraesCS7D01G450500 chr7A 576226124 576226795 671 False 293.500000 481 86.146000 1332 2440 2 chr7A.!!$F5 1108
8 TraesCS7D01G450500 chr7A 658985195 658986183 988 False 224.000000 340 81.056000 1332 2520 2 chr7A.!!$F7 1188

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
777 778 0.67964 TGCACCGGGTTGGATGATTC 60.68 55.0 6.32 0.0 42.0 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2177 6726 0.110238 CACATTCGTGAAAGGCGTGG 60.11 55.0 0.0 0.0 46.8 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
89 90 6.553953 TGGCACTATGTCAATAGGTTAGAA 57.446 37.500 0.00 0.00 40.23 2.10
157 158 8.415553 TCCAAGATTGATAATAAAACAGCATGG 58.584 33.333 0.00 0.00 43.62 3.66
160 161 9.807649 AAGATTGATAATAAAACAGCATGGAAC 57.192 29.630 0.00 0.00 43.62 3.62
188 189 8.922058 TCAAAAGTTATAGATACGTTGGAGAC 57.078 34.615 0.00 0.00 0.00 3.36
359 360 3.366070 CGGGTATCGTGGATGAGATGTAC 60.366 52.174 0.00 0.00 0.00 2.90
507 508 1.532868 GTCAGCAGCTTCACATCGTTT 59.467 47.619 0.00 0.00 0.00 3.60
570 571 0.741326 ACATCGACCTCATCTCCACG 59.259 55.000 0.00 0.00 0.00 4.94
589 590 1.604593 GGCAGTGTCAATGGCCAGT 60.605 57.895 13.05 5.37 45.70 4.00
777 778 0.679640 TGCACCGGGTTGGATGATTC 60.680 55.000 6.32 0.00 42.00 2.52
783 784 1.747206 CGGGTTGGATGATTCACTCCC 60.747 57.143 3.76 3.76 0.00 4.30
808 809 7.095397 CCGCTAAAATATTCGTGAACATATCCA 60.095 37.037 0.00 0.00 0.00 3.41
825 826 7.402054 ACATATCCAAACTTAGTGTCCAATCA 58.598 34.615 0.00 0.00 0.00 2.57
975 1029 3.759086 CGGAATAGATCTCGATGGAGGAA 59.241 47.826 0.00 0.00 40.85 3.36
1075 1162 3.311327 TGAGGGGTATGGGATCAAGAAGA 60.311 47.826 0.00 0.00 0.00 2.87
1098 1185 3.524789 AGATGATGGTGAAGATGGACCAA 59.475 43.478 0.00 0.00 45.36 3.67
1139 2287 0.108898 CTGCTCGAGTGGGACAAGAG 60.109 60.000 15.13 0.00 44.16 2.85
1140 2288 4.900154 CTCGAGTGGGACAAGAGC 57.100 61.111 3.62 0.00 44.16 4.09
1141 2289 1.216710 CTCGAGTGGGACAAGAGCC 59.783 63.158 3.62 0.00 44.16 4.70
1142 2290 2.125912 CGAGTGGGACAAGAGCCG 60.126 66.667 0.00 0.00 44.16 5.52
1143 2291 2.636412 CGAGTGGGACAAGAGCCGA 61.636 63.158 0.00 0.00 44.16 5.54
1144 2292 1.671742 GAGTGGGACAAGAGCCGAA 59.328 57.895 0.00 0.00 44.16 4.30
1145 2293 0.034896 GAGTGGGACAAGAGCCGAAA 59.965 55.000 0.00 0.00 44.16 3.46
1146 2294 0.472471 AGTGGGACAAGAGCCGAAAA 59.528 50.000 0.00 0.00 44.16 2.29
1147 2295 1.133915 AGTGGGACAAGAGCCGAAAAA 60.134 47.619 0.00 0.00 44.16 1.94
1148 2296 1.266989 GTGGGACAAGAGCCGAAAAAG 59.733 52.381 0.00 0.00 44.16 2.27
1149 2297 0.881796 GGGACAAGAGCCGAAAAAGG 59.118 55.000 0.00 0.00 0.00 3.11
1166 2314 3.509659 GCTTTCGCCCCGCTTTAT 58.490 55.556 0.00 0.00 0.00 1.40
1167 2315 2.697819 GCTTTCGCCCCGCTTTATA 58.302 52.632 0.00 0.00 0.00 0.98
1168 2316 0.586802 GCTTTCGCCCCGCTTTATAG 59.413 55.000 0.00 0.00 0.00 1.31
1169 2317 1.808891 GCTTTCGCCCCGCTTTATAGA 60.809 52.381 0.00 0.00 0.00 1.98
1170 2318 2.767505 CTTTCGCCCCGCTTTATAGAT 58.232 47.619 0.00 0.00 0.00 1.98
1171 2319 3.863400 GCTTTCGCCCCGCTTTATAGATA 60.863 47.826 0.00 0.00 0.00 1.98
1172 2320 4.312443 CTTTCGCCCCGCTTTATAGATAA 58.688 43.478 0.00 0.00 0.00 1.75
1173 2321 4.339872 TTCGCCCCGCTTTATAGATAAA 57.660 40.909 0.00 0.00 0.00 1.40
1184 2332 5.758924 CTTTATAGATAAAGCAAACCGCCC 58.241 41.667 8.66 0.00 41.69 6.13
1185 2333 1.658994 TAGATAAAGCAAACCGCCCG 58.341 50.000 0.00 0.00 44.04 6.13
1186 2334 0.035820 AGATAAAGCAAACCGCCCGA 60.036 50.000 0.00 0.00 44.04 5.14
1187 2335 0.377203 GATAAAGCAAACCGCCCGAG 59.623 55.000 0.00 0.00 44.04 4.63
1188 2336 1.654023 ATAAAGCAAACCGCCCGAGC 61.654 55.000 0.00 0.00 44.04 5.03
1192 2340 3.291383 CAAACCGCCCGAGCCAAA 61.291 61.111 0.00 0.00 34.57 3.28
1193 2341 3.292159 AAACCGCCCGAGCCAAAC 61.292 61.111 0.00 0.00 34.57 2.93
1194 2342 4.572571 AACCGCCCGAGCCAAACA 62.573 61.111 0.00 0.00 34.57 2.83
1199 2347 2.361610 CCCGAGCCAAACAGCCAT 60.362 61.111 0.00 0.00 0.00 4.40
1200 2348 2.409870 CCCGAGCCAAACAGCCATC 61.410 63.158 0.00 0.00 0.00 3.51
1201 2349 1.675310 CCGAGCCAAACAGCCATCA 60.675 57.895 0.00 0.00 0.00 3.07
1202 2350 1.651240 CCGAGCCAAACAGCCATCAG 61.651 60.000 0.00 0.00 0.00 2.90
1203 2351 0.674581 CGAGCCAAACAGCCATCAGA 60.675 55.000 0.00 0.00 0.00 3.27
1204 2352 1.093159 GAGCCAAACAGCCATCAGAG 58.907 55.000 0.00 0.00 0.00 3.35
1205 2353 0.403271 AGCCAAACAGCCATCAGAGT 59.597 50.000 0.00 0.00 0.00 3.24
1206 2354 1.202976 AGCCAAACAGCCATCAGAGTT 60.203 47.619 0.00 0.00 0.00 3.01
1207 2355 1.200948 GCCAAACAGCCATCAGAGTTC 59.799 52.381 0.00 0.00 0.00 3.01
1208 2356 1.815003 CCAAACAGCCATCAGAGTTCC 59.185 52.381 0.00 0.00 0.00 3.62
1209 2357 1.815003 CAAACAGCCATCAGAGTTCCC 59.185 52.381 0.00 0.00 0.00 3.97
1210 2358 1.067295 AACAGCCATCAGAGTTCCCA 58.933 50.000 0.00 0.00 0.00 4.37
1211 2359 0.326264 ACAGCCATCAGAGTTCCCAC 59.674 55.000 0.00 0.00 0.00 4.61
1212 2360 0.325933 CAGCCATCAGAGTTCCCACA 59.674 55.000 0.00 0.00 0.00 4.17
1213 2361 0.326264 AGCCATCAGAGTTCCCACAC 59.674 55.000 0.00 0.00 0.00 3.82
1214 2362 0.036732 GCCATCAGAGTTCCCACACA 59.963 55.000 0.00 0.00 0.00 3.72
1215 2363 1.813513 CCATCAGAGTTCCCACACAC 58.186 55.000 0.00 0.00 0.00 3.82
1216 2364 1.072173 CCATCAGAGTTCCCACACACA 59.928 52.381 0.00 0.00 0.00 3.72
1217 2365 2.146342 CATCAGAGTTCCCACACACAC 58.854 52.381 0.00 0.00 0.00 3.82
1218 2366 1.199615 TCAGAGTTCCCACACACACA 58.800 50.000 0.00 0.00 0.00 3.72
1219 2367 1.134521 TCAGAGTTCCCACACACACAC 60.135 52.381 0.00 0.00 0.00 3.82
1220 2368 0.908910 AGAGTTCCCACACACACACA 59.091 50.000 0.00 0.00 0.00 3.72
1221 2369 1.014352 GAGTTCCCACACACACACAC 58.986 55.000 0.00 0.00 0.00 3.82
1222 2370 0.326595 AGTTCCCACACACACACACA 59.673 50.000 0.00 0.00 0.00 3.72
1223 2371 1.169577 GTTCCCACACACACACACAA 58.830 50.000 0.00 0.00 0.00 3.33
1224 2372 1.542030 GTTCCCACACACACACACAAA 59.458 47.619 0.00 0.00 0.00 2.83
1225 2373 1.169577 TCCCACACACACACACAAAC 58.830 50.000 0.00 0.00 0.00 2.93
1226 2374 0.884514 CCCACACACACACACAAACA 59.115 50.000 0.00 0.00 0.00 2.83
1227 2375 1.402194 CCCACACACACACACAAACAC 60.402 52.381 0.00 0.00 0.00 3.32
1228 2376 1.539388 CCACACACACACACAAACACT 59.461 47.619 0.00 0.00 0.00 3.55
1229 2377 2.414029 CCACACACACACACAAACACTC 60.414 50.000 0.00 0.00 0.00 3.51
1230 2378 2.225255 CACACACACACACAAACACTCA 59.775 45.455 0.00 0.00 0.00 3.41
1231 2379 2.881513 ACACACACACACAAACACTCAA 59.118 40.909 0.00 0.00 0.00 3.02
1232 2380 3.316588 ACACACACACACAAACACTCAAA 59.683 39.130 0.00 0.00 0.00 2.69
1233 2381 3.913763 CACACACACACAAACACTCAAAG 59.086 43.478 0.00 0.00 0.00 2.77
1234 2382 3.568007 ACACACACACAAACACTCAAAGT 59.432 39.130 0.00 0.00 0.00 2.66
1235 2383 4.158384 CACACACACAAACACTCAAAGTC 58.842 43.478 0.00 0.00 0.00 3.01
1236 2384 3.818210 ACACACACAAACACTCAAAGTCA 59.182 39.130 0.00 0.00 0.00 3.41
1237 2385 4.158384 CACACACAAACACTCAAAGTCAC 58.842 43.478 0.00 0.00 0.00 3.67
1238 2386 3.818210 ACACACAAACACTCAAAGTCACA 59.182 39.130 0.00 0.00 0.00 3.58
1239 2387 4.083324 ACACACAAACACTCAAAGTCACAG 60.083 41.667 0.00 0.00 0.00 3.66
1240 2388 3.119849 ACACAAACACTCAAAGTCACAGC 60.120 43.478 0.00 0.00 0.00 4.40
1241 2389 2.423538 ACAAACACTCAAAGTCACAGCC 59.576 45.455 0.00 0.00 0.00 4.85
1242 2390 1.299541 AACACTCAAAGTCACAGCCG 58.700 50.000 0.00 0.00 0.00 5.52
1243 2391 1.160329 ACACTCAAAGTCACAGCCGC 61.160 55.000 0.00 0.00 0.00 6.53
1244 2392 1.146041 ACTCAAAGTCACAGCCGCA 59.854 52.632 0.00 0.00 0.00 5.69
1245 2393 1.160329 ACTCAAAGTCACAGCCGCAC 61.160 55.000 0.00 0.00 0.00 5.34
1246 2394 1.153269 TCAAAGTCACAGCCGCACA 60.153 52.632 0.00 0.00 0.00 4.57
1247 2395 1.009675 CAAAGTCACAGCCGCACAC 60.010 57.895 0.00 0.00 0.00 3.82
1248 2396 1.451207 AAAGTCACAGCCGCACACA 60.451 52.632 0.00 0.00 0.00 3.72
1249 2397 1.714899 AAAGTCACAGCCGCACACAC 61.715 55.000 0.00 0.00 0.00 3.82
1250 2398 3.649986 GTCACAGCCGCACACACC 61.650 66.667 0.00 0.00 0.00 4.16
1266 2414 2.493030 CCGCACGGTACCAGTAGG 59.507 66.667 13.54 12.83 42.21 3.18
1267 2415 2.493030 CGCACGGTACCAGTAGGG 59.507 66.667 13.54 9.83 44.81 3.53
1279 2427 3.199880 CCAGTAGGGTTAATGCTGAGG 57.800 52.381 0.00 0.00 32.74 3.86
1280 2428 2.158755 CCAGTAGGGTTAATGCTGAGGG 60.159 54.545 0.00 0.00 32.74 4.30
1281 2429 1.490910 AGTAGGGTTAATGCTGAGGGC 59.509 52.381 0.00 0.00 42.22 5.19
1291 2439 3.978272 CTGAGGGCACAGCTCAAC 58.022 61.111 0.00 0.00 0.00 3.18
1292 2440 1.071987 CTGAGGGCACAGCTCAACA 59.928 57.895 0.00 0.00 0.00 3.33
1293 2441 0.535780 CTGAGGGCACAGCTCAACAA 60.536 55.000 0.00 0.00 0.00 2.83
1294 2442 0.535780 TGAGGGCACAGCTCAACAAG 60.536 55.000 0.00 0.00 0.00 3.16
1305 2453 2.504367 GCTCAACAAGCCCTAAGAACA 58.496 47.619 0.00 0.00 45.92 3.18
1306 2454 2.884639 GCTCAACAAGCCCTAAGAACAA 59.115 45.455 0.00 0.00 45.92 2.83
1307 2455 3.317993 GCTCAACAAGCCCTAAGAACAAA 59.682 43.478 0.00 0.00 45.92 2.83
1308 2456 4.202111 GCTCAACAAGCCCTAAGAACAAAA 60.202 41.667 0.00 0.00 45.92 2.44
1309 2457 5.514274 TCAACAAGCCCTAAGAACAAAAG 57.486 39.130 0.00 0.00 0.00 2.27
1310 2458 4.340950 TCAACAAGCCCTAAGAACAAAAGG 59.659 41.667 0.00 0.00 0.00 3.11
1311 2459 4.178956 ACAAGCCCTAAGAACAAAAGGA 57.821 40.909 0.00 0.00 31.64 3.36
1312 2460 3.889538 ACAAGCCCTAAGAACAAAAGGAC 59.110 43.478 0.00 0.00 31.64 3.85
1313 2461 3.876309 AGCCCTAAGAACAAAAGGACA 57.124 42.857 0.00 0.00 31.64 4.02
1314 2462 3.487372 AGCCCTAAGAACAAAAGGACAC 58.513 45.455 0.00 0.00 31.64 3.67
1315 2463 3.117663 AGCCCTAAGAACAAAAGGACACA 60.118 43.478 0.00 0.00 31.64 3.72
1316 2464 3.004419 GCCCTAAGAACAAAAGGACACAC 59.996 47.826 0.00 0.00 31.64 3.82
1317 2465 4.204012 CCCTAAGAACAAAAGGACACACA 58.796 43.478 0.00 0.00 31.64 3.72
1318 2466 4.036380 CCCTAAGAACAAAAGGACACACAC 59.964 45.833 0.00 0.00 31.64 3.82
1319 2467 4.638421 CCTAAGAACAAAAGGACACACACA 59.362 41.667 0.00 0.00 31.64 3.72
1320 2468 5.124776 CCTAAGAACAAAAGGACACACACAA 59.875 40.000 0.00 0.00 31.64 3.33
1321 2469 5.461032 AAGAACAAAAGGACACACACAAA 57.539 34.783 0.00 0.00 0.00 2.83
1322 2470 5.059404 AGAACAAAAGGACACACACAAAG 57.941 39.130 0.00 0.00 0.00 2.77
1323 2471 4.764823 AGAACAAAAGGACACACACAAAGA 59.235 37.500 0.00 0.00 0.00 2.52
1324 2472 4.434713 ACAAAAGGACACACACAAAGAC 57.565 40.909 0.00 0.00 0.00 3.01
1325 2473 3.192633 ACAAAAGGACACACACAAAGACC 59.807 43.478 0.00 0.00 0.00 3.85
1326 2474 1.663695 AAGGACACACACAAAGACCG 58.336 50.000 0.00 0.00 0.00 4.79
1327 2475 0.814010 AGGACACACACAAAGACCGC 60.814 55.000 0.00 0.00 0.00 5.68
1328 2476 1.647084 GACACACACAAAGACCGCC 59.353 57.895 0.00 0.00 0.00 6.13
1329 2477 1.078072 ACACACACAAAGACCGCCA 60.078 52.632 0.00 0.00 0.00 5.69
1330 2478 1.355210 CACACACAAAGACCGCCAC 59.645 57.895 0.00 0.00 0.00 5.01
1536 2690 0.034767 TCCCTGACGACCAGTACGAT 60.035 55.000 0.00 0.00 41.33 3.73
1558 2712 0.525668 CATCCACTACGACAGCGACC 60.526 60.000 0.00 0.00 41.64 4.79
1628 2798 8.859236 ATCTAATGTGATGGATTAGATTGTGG 57.141 34.615 0.00 0.00 45.02 4.17
1646 2818 1.048601 GGTTCCTCCTGGCGATATGA 58.951 55.000 0.00 0.00 0.00 2.15
1653 2829 3.057174 CCTCCTGGCGATATGAGTCTTAC 60.057 52.174 0.00 0.00 0.00 2.34
1693 2882 8.473219 AGTGATGATGATATTGTATCGTAGCAT 58.527 33.333 0.00 0.00 30.31 3.79
1694 2883 8.538039 GTGATGATGATATTGTATCGTAGCATG 58.462 37.037 0.00 0.00 28.02 4.06
1732 2923 2.863704 GCTTTTGTAACCAGGCAAGCTG 60.864 50.000 0.00 0.00 34.94 4.24
1733 2924 2.065899 TTTGTAACCAGGCAAGCTGT 57.934 45.000 0.00 0.00 0.00 4.40
1734 2925 2.065899 TTGTAACCAGGCAAGCTGTT 57.934 45.000 0.00 0.00 0.00 3.16
1735 2926 2.940994 TGTAACCAGGCAAGCTGTTA 57.059 45.000 0.00 0.00 0.00 2.41
1741 2932 7.969004 TGTAACCAGGCAAGCTGTTATATATA 58.031 34.615 0.00 0.00 0.00 0.86
1744 2935 6.702329 ACCAGGCAAGCTGTTATATATACTC 58.298 40.000 0.00 0.00 0.00 2.59
1748 2939 8.531982 CAGGCAAGCTGTTATATATACTCCTAA 58.468 37.037 0.00 0.00 0.00 2.69
1803 3003 4.689071 TCTCTGTTACGTTGCTCTTCAAA 58.311 39.130 0.00 0.00 36.26 2.69
1804 3004 5.113383 TCTCTGTTACGTTGCTCTTCAAAA 58.887 37.500 0.00 0.00 36.26 2.44
1810 3010 1.946768 CGTTGCTCTTCAAAACAGGGA 59.053 47.619 0.00 0.00 36.26 4.20
1814 3014 2.813754 TGCTCTTCAAAACAGGGAATCG 59.186 45.455 0.00 0.00 0.00 3.34
1847 3093 9.884636 TCACAATTTAATACTACTACTGTGCAT 57.115 29.630 0.00 0.00 33.38 3.96
1860 3106 3.359033 ACTGTGCATCTGTTGGCAATAT 58.641 40.909 1.92 0.00 42.45 1.28
1869 3115 7.285172 TGCATCTGTTGGCAATATTAGTATGTT 59.715 33.333 1.92 0.00 37.03 2.71
1935 5800 8.247562 GGAGGTATAAGATATGTTCTACTGCAG 58.752 40.741 13.48 13.48 33.05 4.41
1936 5801 8.128322 AGGTATAAGATATGTTCTACTGCAGG 57.872 38.462 19.93 0.36 33.05 4.85
1967 6515 2.757099 GCCTGGCCACAATCTGGG 60.757 66.667 7.66 0.00 41.02 4.45
1969 6517 1.679977 CCTGGCCACAATCTGGGTG 60.680 63.158 0.00 0.00 41.02 4.61
1972 6520 0.323633 TGGCCACAATCTGGGTGATG 60.324 55.000 0.00 0.00 41.02 3.07
1973 6521 0.034186 GGCCACAATCTGGGTGATGA 60.034 55.000 0.00 0.00 41.02 2.92
1995 6544 5.125257 TGACTCAGAAGTAGATGAAGCTCAG 59.875 44.000 0.00 0.00 35.28 3.35
1996 6545 5.016173 ACTCAGAAGTAGATGAAGCTCAGT 58.984 41.667 0.00 0.00 32.59 3.41
1997 6546 5.105797 ACTCAGAAGTAGATGAAGCTCAGTG 60.106 44.000 0.00 0.00 32.59 3.66
1998 6547 4.769488 TCAGAAGTAGATGAAGCTCAGTGT 59.231 41.667 0.00 0.00 0.00 3.55
1999 6548 4.863689 CAGAAGTAGATGAAGCTCAGTGTG 59.136 45.833 0.00 0.00 0.00 3.82
2000 6549 4.526262 AGAAGTAGATGAAGCTCAGTGTGT 59.474 41.667 0.00 0.00 0.00 3.72
2001 6550 4.185467 AGTAGATGAAGCTCAGTGTGTG 57.815 45.455 0.00 0.00 0.00 3.82
2002 6551 3.576118 AGTAGATGAAGCTCAGTGTGTGT 59.424 43.478 0.00 0.00 0.00 3.72
2003 6552 2.763933 AGATGAAGCTCAGTGTGTGTG 58.236 47.619 0.00 0.00 0.00 3.82
2004 6553 1.802960 GATGAAGCTCAGTGTGTGTGG 59.197 52.381 0.00 0.00 0.00 4.17
2005 6554 0.829990 TGAAGCTCAGTGTGTGTGGA 59.170 50.000 0.00 0.00 0.00 4.02
2006 6555 1.221414 GAAGCTCAGTGTGTGTGGAC 58.779 55.000 0.00 0.00 0.00 4.02
2007 6556 0.530650 AAGCTCAGTGTGTGTGGACG 60.531 55.000 0.00 0.00 0.00 4.79
2008 6557 1.227263 GCTCAGTGTGTGTGGACGT 60.227 57.895 0.00 0.00 0.00 4.34
2009 6558 1.490693 GCTCAGTGTGTGTGGACGTG 61.491 60.000 0.00 0.00 0.00 4.49
2010 6559 0.875908 CTCAGTGTGTGTGGACGTGG 60.876 60.000 0.00 0.00 0.00 4.94
2011 6560 1.142965 CAGTGTGTGTGGACGTGGA 59.857 57.895 0.00 0.00 0.00 4.02
2012 6561 0.875908 CAGTGTGTGTGGACGTGGAG 60.876 60.000 0.00 0.00 0.00 3.86
2013 6562 1.143183 GTGTGTGTGGACGTGGAGT 59.857 57.895 0.00 0.00 0.00 3.85
2014 6563 0.386476 GTGTGTGTGGACGTGGAGTA 59.614 55.000 0.00 0.00 0.00 2.59
2015 6564 1.000506 GTGTGTGTGGACGTGGAGTAT 59.999 52.381 0.00 0.00 0.00 2.12
2016 6565 1.689813 TGTGTGTGGACGTGGAGTATT 59.310 47.619 0.00 0.00 0.00 1.89
2017 6566 2.103432 TGTGTGTGGACGTGGAGTATTT 59.897 45.455 0.00 0.00 0.00 1.40
2018 6567 2.478894 GTGTGTGGACGTGGAGTATTTG 59.521 50.000 0.00 0.00 0.00 2.32
2019 6568 2.365941 TGTGTGGACGTGGAGTATTTGA 59.634 45.455 0.00 0.00 0.00 2.69
2020 6569 2.993899 GTGTGGACGTGGAGTATTTGAG 59.006 50.000 0.00 0.00 0.00 3.02
2021 6570 2.000447 GTGGACGTGGAGTATTTGAGC 59.000 52.381 0.00 0.00 0.00 4.26
2022 6571 1.899814 TGGACGTGGAGTATTTGAGCT 59.100 47.619 0.00 0.00 0.00 4.09
2023 6572 2.094182 TGGACGTGGAGTATTTGAGCTC 60.094 50.000 6.82 6.82 0.00 4.09
2024 6573 2.186076 GACGTGGAGTATTTGAGCTCG 58.814 52.381 9.64 0.00 32.83 5.03
2025 6574 1.816835 ACGTGGAGTATTTGAGCTCGA 59.183 47.619 9.64 3.88 32.83 4.04
2026 6575 2.159366 ACGTGGAGTATTTGAGCTCGAG 60.159 50.000 8.45 8.45 32.83 4.04
2027 6576 2.197577 GTGGAGTATTTGAGCTCGAGC 58.802 52.381 30.01 30.01 42.49 5.03
2039 6588 1.285578 GCTCGAGCTCAAATGAGTCC 58.714 55.000 29.88 0.00 43.85 3.85
2040 6589 1.554392 CTCGAGCTCAAATGAGTCCG 58.446 55.000 15.40 13.88 43.85 4.79
2041 6590 0.458543 TCGAGCTCAAATGAGTCCGC 60.459 55.000 15.40 0.00 43.85 5.54
2042 6591 0.737367 CGAGCTCAAATGAGTCCGCA 60.737 55.000 15.40 0.00 43.85 5.69
2043 6592 1.661341 GAGCTCAAATGAGTCCGCAT 58.339 50.000 9.40 0.00 43.85 4.73
2044 6593 1.329906 GAGCTCAAATGAGTCCGCATG 59.670 52.381 9.40 0.00 43.85 4.06
2045 6594 1.065926 AGCTCAAATGAGTCCGCATGA 60.066 47.619 11.77 0.00 43.85 3.07
2046 6595 1.739466 GCTCAAATGAGTCCGCATGAA 59.261 47.619 11.77 0.00 43.85 2.57
2047 6596 2.476854 GCTCAAATGAGTCCGCATGAAC 60.477 50.000 11.77 0.00 43.85 3.18
2048 6597 2.743664 CTCAAATGAGTCCGCATGAACA 59.256 45.455 0.00 0.00 37.40 3.18
2049 6598 2.743664 TCAAATGAGTCCGCATGAACAG 59.256 45.455 0.00 0.00 0.00 3.16
2050 6599 2.479566 AATGAGTCCGCATGAACAGT 57.520 45.000 0.00 0.00 0.00 3.55
2051 6600 3.610040 AATGAGTCCGCATGAACAGTA 57.390 42.857 0.00 0.00 0.00 2.74
2052 6601 3.610040 ATGAGTCCGCATGAACAGTAA 57.390 42.857 0.00 0.00 0.00 2.24
2053 6602 3.394674 TGAGTCCGCATGAACAGTAAA 57.605 42.857 0.00 0.00 0.00 2.01
2054 6603 3.734463 TGAGTCCGCATGAACAGTAAAA 58.266 40.909 0.00 0.00 0.00 1.52
2055 6604 4.323417 TGAGTCCGCATGAACAGTAAAAT 58.677 39.130 0.00 0.00 0.00 1.82
2056 6605 4.391830 TGAGTCCGCATGAACAGTAAAATC 59.608 41.667 0.00 0.00 0.00 2.17
2057 6606 4.323417 AGTCCGCATGAACAGTAAAATCA 58.677 39.130 0.00 0.00 0.00 2.57
2058 6607 4.759693 AGTCCGCATGAACAGTAAAATCAA 59.240 37.500 0.00 0.00 0.00 2.57
2059 6608 5.240623 AGTCCGCATGAACAGTAAAATCAAA 59.759 36.000 0.00 0.00 0.00 2.69
2060 6609 5.918011 GTCCGCATGAACAGTAAAATCAAAA 59.082 36.000 0.00 0.00 0.00 2.44
2061 6610 6.419413 GTCCGCATGAACAGTAAAATCAAAAA 59.581 34.615 0.00 0.00 0.00 1.94
2106 6655 6.959671 TTTTGTGGACTTTGACAAATGTTC 57.040 33.333 0.05 2.06 40.73 3.18
2107 6656 5.913137 TTGTGGACTTTGACAAATGTTCT 57.087 34.783 0.05 0.00 0.00 3.01
2108 6657 7.397892 TTTGTGGACTTTGACAAATGTTCTA 57.602 32.000 0.05 0.00 37.19 2.10
2109 6658 7.397892 TTGTGGACTTTGACAAATGTTCTAA 57.602 32.000 0.05 0.03 0.00 2.10
2110 6659 7.026631 TGTGGACTTTGACAAATGTTCTAAG 57.973 36.000 0.05 0.00 0.00 2.18
2111 6660 6.601613 TGTGGACTTTGACAAATGTTCTAAGT 59.398 34.615 0.05 10.16 0.00 2.24
2112 6661 6.912591 GTGGACTTTGACAAATGTTCTAAGTG 59.087 38.462 0.05 0.00 0.00 3.16
2113 6662 5.915196 GGACTTTGACAAATGTTCTAAGTGC 59.085 40.000 0.05 12.40 30.89 4.40
2114 6663 6.238759 GGACTTTGACAAATGTTCTAAGTGCT 60.239 38.462 0.05 0.00 33.33 4.40
2115 6664 7.100458 ACTTTGACAAATGTTCTAAGTGCTT 57.900 32.000 0.05 0.00 0.00 3.91
2116 6665 6.974622 ACTTTGACAAATGTTCTAAGTGCTTG 59.025 34.615 0.05 0.00 0.00 4.01
2117 6666 4.858935 TGACAAATGTTCTAAGTGCTTGC 58.141 39.130 0.00 0.00 0.00 4.01
2118 6667 4.337836 TGACAAATGTTCTAAGTGCTTGCA 59.662 37.500 0.00 0.00 0.00 4.08
2119 6668 5.163571 TGACAAATGTTCTAAGTGCTTGCAA 60.164 36.000 0.00 0.00 0.00 4.08
2120 6669 5.659463 ACAAATGTTCTAAGTGCTTGCAAA 58.341 33.333 0.00 0.00 0.00 3.68
2121 6670 6.282930 ACAAATGTTCTAAGTGCTTGCAAAT 58.717 32.000 0.00 0.00 0.00 2.32
2122 6671 6.762661 ACAAATGTTCTAAGTGCTTGCAAATT 59.237 30.769 0.00 0.00 0.00 1.82
2123 6672 7.280652 ACAAATGTTCTAAGTGCTTGCAAATTT 59.719 29.630 0.00 0.00 0.00 1.82
2124 6673 7.790823 AATGTTCTAAGTGCTTGCAAATTTT 57.209 28.000 0.00 0.00 0.00 1.82
2125 6674 6.826893 TGTTCTAAGTGCTTGCAAATTTTC 57.173 33.333 0.00 0.00 0.00 2.29
2126 6675 6.336566 TGTTCTAAGTGCTTGCAAATTTTCA 58.663 32.000 0.00 0.00 0.00 2.69
2127 6676 6.985645 TGTTCTAAGTGCTTGCAAATTTTCAT 59.014 30.769 0.00 0.00 0.00 2.57
2128 6677 7.169645 TGTTCTAAGTGCTTGCAAATTTTCATC 59.830 33.333 0.00 0.00 0.00 2.92
2129 6678 6.747125 TCTAAGTGCTTGCAAATTTTCATCA 58.253 32.000 0.00 0.00 0.00 3.07
2130 6679 7.208777 TCTAAGTGCTTGCAAATTTTCATCAA 58.791 30.769 0.00 0.00 0.00 2.57
2131 6680 5.917541 AGTGCTTGCAAATTTTCATCAAG 57.082 34.783 0.00 11.74 37.70 3.02
2132 6681 5.603596 AGTGCTTGCAAATTTTCATCAAGA 58.396 33.333 16.83 5.87 37.03 3.02
2133 6682 5.694910 AGTGCTTGCAAATTTTCATCAAGAG 59.305 36.000 16.83 3.79 37.03 2.85
2134 6683 5.693104 GTGCTTGCAAATTTTCATCAAGAGA 59.307 36.000 16.83 5.85 37.03 3.10
2135 6684 6.367969 GTGCTTGCAAATTTTCATCAAGAGAT 59.632 34.615 16.83 0.00 37.03 2.75
2136 6685 6.588756 TGCTTGCAAATTTTCATCAAGAGATC 59.411 34.615 16.83 0.00 37.03 2.75
2137 6686 6.588756 GCTTGCAAATTTTCATCAAGAGATCA 59.411 34.615 16.83 0.00 37.03 2.92
2138 6687 7.411588 GCTTGCAAATTTTCATCAAGAGATCAC 60.412 37.037 16.83 0.00 37.03 3.06
2139 6688 7.223260 TGCAAATTTTCATCAAGAGATCACT 57.777 32.000 0.00 0.00 30.20 3.41
2140 6689 7.663827 TGCAAATTTTCATCAAGAGATCACTT 58.336 30.769 0.00 0.00 30.20 3.16
2141 6690 8.145767 TGCAAATTTTCATCAAGAGATCACTTT 58.854 29.630 2.29 0.00 30.20 2.66
2142 6691 8.985805 GCAAATTTTCATCAAGAGATCACTTTT 58.014 29.630 2.29 0.00 30.20 2.27
2147 6696 9.740239 TTTTCATCAAGAGATCACTTTTGAAAG 57.260 29.630 24.05 12.12 45.60 2.62
2148 6697 6.906659 TCATCAAGAGATCACTTTTGAAAGC 58.093 36.000 2.29 0.00 45.60 3.51
2149 6698 6.487668 TCATCAAGAGATCACTTTTGAAAGCA 59.512 34.615 2.29 0.00 45.60 3.91
2150 6699 6.889301 TCAAGAGATCACTTTTGAAAGCAT 57.111 33.333 2.29 0.00 41.85 3.79
2151 6700 7.281040 TCAAGAGATCACTTTTGAAAGCATT 57.719 32.000 2.29 0.00 41.85 3.56
2152 6701 7.719483 TCAAGAGATCACTTTTGAAAGCATTT 58.281 30.769 2.29 0.00 41.85 2.32
2153 6702 8.199449 TCAAGAGATCACTTTTGAAAGCATTTT 58.801 29.630 2.29 0.00 41.85 1.82
2154 6703 7.941795 AGAGATCACTTTTGAAAGCATTTTG 57.058 32.000 3.48 0.00 39.27 2.44
2155 6704 6.927381 AGAGATCACTTTTGAAAGCATTTTGG 59.073 34.615 3.48 0.00 39.27 3.28
2156 6705 6.819284 AGATCACTTTTGAAAGCATTTTGGA 58.181 32.000 3.48 0.00 39.27 3.53
2157 6706 6.927381 AGATCACTTTTGAAAGCATTTTGGAG 59.073 34.615 3.48 0.00 39.27 3.86
2158 6707 4.810491 TCACTTTTGAAAGCATTTTGGAGC 59.190 37.500 3.48 0.00 39.27 4.70
2159 6708 4.571580 CACTTTTGAAAGCATTTTGGAGCA 59.428 37.500 3.48 0.00 39.27 4.26
2160 6709 4.571984 ACTTTTGAAAGCATTTTGGAGCAC 59.428 37.500 3.48 0.00 39.27 4.40
2161 6710 4.405116 TTTGAAAGCATTTTGGAGCACT 57.595 36.364 0.00 0.00 39.27 4.40
2162 6711 5.528043 TTTGAAAGCATTTTGGAGCACTA 57.472 34.783 0.00 0.00 39.27 2.74
2163 6712 5.726980 TTGAAAGCATTTTGGAGCACTAT 57.273 34.783 0.00 0.00 39.27 2.12
2164 6713 5.726980 TGAAAGCATTTTGGAGCACTATT 57.273 34.783 0.00 0.00 39.27 1.73
2165 6714 6.100404 TGAAAGCATTTTGGAGCACTATTT 57.900 33.333 0.00 0.00 39.27 1.40
2166 6715 6.523840 TGAAAGCATTTTGGAGCACTATTTT 58.476 32.000 0.00 0.00 39.27 1.82
2167 6716 6.991531 TGAAAGCATTTTGGAGCACTATTTTT 59.008 30.769 0.00 0.00 39.27 1.94
2168 6717 6.790285 AAGCATTTTGGAGCACTATTTTTG 57.210 33.333 0.00 0.00 0.00 2.44
2169 6718 5.857268 AGCATTTTGGAGCACTATTTTTGT 58.143 33.333 0.00 0.00 0.00 2.83
2170 6719 6.290605 AGCATTTTGGAGCACTATTTTTGTT 58.709 32.000 0.00 0.00 0.00 2.83
2171 6720 6.767423 AGCATTTTGGAGCACTATTTTTGTTT 59.233 30.769 0.00 0.00 0.00 2.83
2172 6721 7.282901 AGCATTTTGGAGCACTATTTTTGTTTT 59.717 29.630 0.00 0.00 0.00 2.43
2173 6722 7.914871 GCATTTTGGAGCACTATTTTTGTTTTT 59.085 29.630 0.00 0.00 0.00 1.94
2189 6738 3.354131 TTTTTGCCACGCCTTTCAC 57.646 47.368 0.00 0.00 0.00 3.18
2190 6739 0.526524 TTTTTGCCACGCCTTTCACG 60.527 50.000 0.00 0.00 0.00 4.35
2191 6740 1.377366 TTTTGCCACGCCTTTCACGA 61.377 50.000 0.00 0.00 0.00 4.35
2192 6741 1.377366 TTTGCCACGCCTTTCACGAA 61.377 50.000 0.00 0.00 0.00 3.85
2193 6742 1.169661 TTGCCACGCCTTTCACGAAT 61.170 50.000 0.00 0.00 0.00 3.34
2194 6743 1.154225 GCCACGCCTTTCACGAATG 60.154 57.895 0.00 0.00 0.00 2.67
2195 6744 1.852067 GCCACGCCTTTCACGAATGT 61.852 55.000 0.00 0.00 0.00 2.71
2208 6757 3.531934 ACGAATGTGAGCTCATGATGA 57.468 42.857 21.47 2.26 0.00 2.92
2209 6758 3.865446 ACGAATGTGAGCTCATGATGAA 58.135 40.909 21.47 2.27 0.00 2.57
2210 6759 4.256110 ACGAATGTGAGCTCATGATGAAA 58.744 39.130 21.47 0.44 0.00 2.69
2211 6760 4.696877 ACGAATGTGAGCTCATGATGAAAA 59.303 37.500 21.47 0.00 0.00 2.29
2212 6761 5.356190 ACGAATGTGAGCTCATGATGAAAAT 59.644 36.000 21.47 0.00 0.00 1.82
2213 6762 6.127814 ACGAATGTGAGCTCATGATGAAAATT 60.128 34.615 21.47 9.55 0.00 1.82
2214 6763 6.750501 CGAATGTGAGCTCATGATGAAAATTT 59.249 34.615 21.47 0.00 0.00 1.82
2215 6764 7.253651 CGAATGTGAGCTCATGATGAAAATTTG 60.254 37.037 21.47 9.57 0.00 2.32
2216 6765 5.165676 TGTGAGCTCATGATGAAAATTTGC 58.834 37.500 21.47 1.80 0.00 3.68
2217 6766 5.165676 GTGAGCTCATGATGAAAATTTGCA 58.834 37.500 21.47 0.07 0.00 4.08
2218 6767 5.636121 GTGAGCTCATGATGAAAATTTGCAA 59.364 36.000 21.47 0.00 0.00 4.08
2219 6768 6.146510 GTGAGCTCATGATGAAAATTTGCAAA 59.853 34.615 21.47 15.44 0.00 3.68
2220 6769 6.146510 TGAGCTCATGATGAAAATTTGCAAAC 59.853 34.615 15.41 1.98 0.00 2.93
2221 6770 5.992829 AGCTCATGATGAAAATTTGCAAACA 59.007 32.000 15.41 8.39 0.00 2.83
2222 6771 6.073440 AGCTCATGATGAAAATTTGCAAACAC 60.073 34.615 15.41 6.88 0.00 3.32
2223 6772 6.073440 GCTCATGATGAAAATTTGCAAACACT 60.073 34.615 15.41 0.82 0.00 3.55
2224 6773 7.519328 GCTCATGATGAAAATTTGCAAACACTT 60.519 33.333 15.41 7.95 0.00 3.16
2225 6774 8.883954 TCATGATGAAAATTTGCAAACACTTA 57.116 26.923 15.41 1.82 0.00 2.24
2226 6775 9.491675 TCATGATGAAAATTTGCAAACACTTAT 57.508 25.926 15.41 6.88 0.00 1.73
2237 6786 8.932945 TTTGCAAACACTTATAACATTTGTCA 57.067 26.923 8.05 7.86 33.70 3.58
2238 6787 8.932945 TTGCAAACACTTATAACATTTGTCAA 57.067 26.923 0.00 11.27 33.70 3.18
2239 6788 8.932945 TGCAAACACTTATAACATTTGTCAAA 57.067 26.923 0.00 0.00 33.70 2.69
2240 6789 9.029243 TGCAAACACTTATAACATTTGTCAAAG 57.971 29.630 4.03 0.00 33.70 2.77
2241 6790 9.030301 GCAAACACTTATAACATTTGTCAAAGT 57.970 29.630 4.03 0.09 33.70 2.66
2304 6853 8.809159 TTTGTTTTTGATTTGCTATTCATCGA 57.191 26.923 0.00 0.00 0.00 3.59
2305 6854 8.451687 TTGTTTTTGATTTGCTATTCATCGAG 57.548 30.769 0.00 0.00 0.00 4.04
2306 6855 6.527722 TGTTTTTGATTTGCTATTCATCGAGC 59.472 34.615 0.00 0.00 39.25 5.03
2307 6856 6.441093 TTTTGATTTGCTATTCATCGAGCT 57.559 33.333 0.00 0.00 39.54 4.09
2308 6857 5.663795 TTGATTTGCTATTCATCGAGCTC 57.336 39.130 2.73 2.73 39.54 4.09
2309 6858 4.696455 TGATTTGCTATTCATCGAGCTCA 58.304 39.130 15.40 1.08 39.54 4.26
2310 6859 4.748600 TGATTTGCTATTCATCGAGCTCAG 59.251 41.667 15.40 6.88 39.54 3.35
2311 6860 4.391405 TTTGCTATTCATCGAGCTCAGA 57.609 40.909 15.40 12.32 39.54 3.27
2312 6861 4.597404 TTGCTATTCATCGAGCTCAGAT 57.403 40.909 15.40 14.06 39.54 2.90
2313 6862 3.910648 TGCTATTCATCGAGCTCAGATG 58.089 45.455 27.94 27.94 44.95 2.90
2324 6873 3.383092 CTCAGATGAGCTCAAGCCC 57.617 57.895 22.50 10.33 43.38 5.19
2325 6874 0.540454 CTCAGATGAGCTCAAGCCCA 59.460 55.000 22.50 3.05 43.38 5.36
2326 6875 0.986527 TCAGATGAGCTCAAGCCCAA 59.013 50.000 22.50 1.53 43.38 4.12
2327 6876 1.352017 TCAGATGAGCTCAAGCCCAAA 59.648 47.619 22.50 0.00 43.38 3.28
2328 6877 2.165167 CAGATGAGCTCAAGCCCAAAA 58.835 47.619 22.50 0.00 43.38 2.44
2329 6878 2.163815 CAGATGAGCTCAAGCCCAAAAG 59.836 50.000 22.50 0.00 43.38 2.27
2330 6879 1.475682 GATGAGCTCAAGCCCAAAAGG 59.524 52.381 22.50 0.00 43.38 3.11
2331 6880 0.540365 TGAGCTCAAGCCCAAAAGGG 60.540 55.000 15.67 0.00 43.38 3.95
2340 6889 1.900245 GCCCAAAAGGGTACTTTCGA 58.100 50.000 2.03 0.00 45.85 3.71
2341 6890 1.810755 GCCCAAAAGGGTACTTTCGAG 59.189 52.381 2.03 0.00 45.85 4.04
2404 7132 5.632034 AGTCCACTTACCTTCTGTTTTCT 57.368 39.130 0.00 0.00 0.00 2.52
2405 7133 5.612351 AGTCCACTTACCTTCTGTTTTCTC 58.388 41.667 0.00 0.00 0.00 2.87
2406 7134 5.130477 AGTCCACTTACCTTCTGTTTTCTCA 59.870 40.000 0.00 0.00 0.00 3.27
2407 7135 5.998363 GTCCACTTACCTTCTGTTTTCTCAT 59.002 40.000 0.00 0.00 0.00 2.90
2426 7154 7.092137 TCTCATTCATTCATGGCTTTAACTG 57.908 36.000 0.00 0.00 0.00 3.16
2441 7176 4.571375 TTAACTGCGCACTAAATACACG 57.429 40.909 5.66 0.00 0.00 4.49
2453 7192 5.290158 CACTAAATACACGCGTTATCCTGTT 59.710 40.000 10.22 5.38 0.00 3.16
2468 7207 4.508551 TCCTGTTATGTGGAGATGCAAT 57.491 40.909 0.00 0.00 0.00 3.56
2470 7209 4.641541 TCCTGTTATGTGGAGATGCAATTG 59.358 41.667 0.00 0.00 0.00 2.32
2473 7212 6.095300 CCTGTTATGTGGAGATGCAATTGTTA 59.905 38.462 7.40 0.00 0.00 2.41
2478 7217 7.837202 ATGTGGAGATGCAATTGTTATTTTG 57.163 32.000 7.40 0.00 0.00 2.44
2479 7218 6.164876 TGTGGAGATGCAATTGTTATTTTGG 58.835 36.000 7.40 0.00 0.00 3.28
2501 7246 1.986698 ACAAAAGCGAATGCATGCTC 58.013 45.000 20.33 8.12 46.23 4.26
2510 7255 2.534349 CGAATGCATGCTCTTGATTTGC 59.466 45.455 20.33 0.00 0.00 3.68
2520 7265 2.671396 CTCTTGATTTGCAATTGCCTGC 59.329 45.455 26.94 14.08 42.95 4.85
2527 7272 3.059603 GCAATTGCCTGCAGATTGG 57.940 52.632 20.06 0.00 42.17 3.16
2544 7289 0.111061 TGGCTGATTGCTGACTGGTT 59.889 50.000 0.00 0.00 42.39 3.67
2547 7292 1.610522 GCTGATTGCTGACTGGTTTGT 59.389 47.619 0.00 0.00 38.95 2.83
2552 7297 1.401761 TGCTGACTGGTTTGTTGCAT 58.598 45.000 0.00 0.00 0.00 3.96
2553 7298 1.067364 TGCTGACTGGTTTGTTGCATG 59.933 47.619 0.00 0.00 0.00 4.06
2564 7321 5.163364 TGGTTTGTTGCATGGTCATAGTTTT 60.163 36.000 0.00 0.00 0.00 2.43
2565 7322 5.405269 GGTTTGTTGCATGGTCATAGTTTTC 59.595 40.000 0.00 0.00 0.00 2.29
2567 7324 4.148079 TGTTGCATGGTCATAGTTTTCCA 58.852 39.130 0.00 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 5.277974 CGCAGGAAATCAATATCAAACGGAT 60.278 40.000 0.00 0.00 40.14 4.18
10 11 6.498304 ACATCGCAGGAAATCAATATCAAAC 58.502 36.000 0.00 0.00 0.00 2.93
60 61 1.155889 TTGACATAGTGCCAAGTGCG 58.844 50.000 0.00 0.00 45.60 5.34
164 165 7.828604 CGTCTCCAACGTATCTATAACTTTTG 58.171 38.462 0.00 0.00 46.42 2.44
188 189 3.730895 CGCCTACGTCTCTGATACG 57.269 57.895 13.15 13.15 45.64 3.06
359 360 2.202610 TCTCGCGCCACAGAATCG 60.203 61.111 0.00 0.00 0.00 3.34
570 571 2.283101 TGGCCATTGACACTGCCC 60.283 61.111 0.00 0.00 43.35 5.36
589 590 0.605589 TCCTCGTCAGAGTTCGCTGA 60.606 55.000 2.38 2.38 42.86 4.26
777 778 4.116961 TCACGAATATTTTAGCGGGAGTG 58.883 43.478 0.00 0.00 31.84 3.51
783 784 7.792925 TGGATATGTTCACGAATATTTTAGCG 58.207 34.615 0.00 0.00 0.00 4.26
808 809 8.918202 TGTATCTTTGATTGGACACTAAGTTT 57.082 30.769 0.00 0.00 0.00 2.66
825 826 3.003480 GCTTCTCCAACGCTGTATCTTT 58.997 45.455 0.00 0.00 0.00 2.52
940 961 2.576643 TATTCCGTCGAAACCGGGGC 62.577 60.000 6.32 0.00 45.51 5.80
975 1029 2.496817 GAAGTCGCGATCCCAGCT 59.503 61.111 14.06 0.00 0.00 4.24
1075 1162 3.524789 TGGTCCATCTTCACCATCATCTT 59.475 43.478 0.00 0.00 37.78 2.40
1098 1185 2.612972 CCACTTGATGTAGCTGTTCCGT 60.613 50.000 0.00 0.00 0.00 4.69
1150 2298 2.234300 TCTATAAAGCGGGGCGAAAG 57.766 50.000 0.00 0.00 0.00 2.62
1151 2299 2.922740 ATCTATAAAGCGGGGCGAAA 57.077 45.000 0.00 0.00 0.00 3.46
1152 2300 4.312443 CTTTATCTATAAAGCGGGGCGAA 58.688 43.478 9.01 0.00 41.69 4.70
1153 2301 3.921677 CTTTATCTATAAAGCGGGGCGA 58.078 45.455 9.01 0.00 41.69 5.54
1162 2310 4.273969 CGGGCGGTTTGCTTTATCTATAAA 59.726 41.667 0.00 0.00 45.43 1.40
1163 2311 3.810941 CGGGCGGTTTGCTTTATCTATAA 59.189 43.478 0.00 0.00 45.43 0.98
1164 2312 3.069872 TCGGGCGGTTTGCTTTATCTATA 59.930 43.478 0.00 0.00 45.43 1.31
1165 2313 2.158871 TCGGGCGGTTTGCTTTATCTAT 60.159 45.455 0.00 0.00 45.43 1.98
1166 2314 1.207570 TCGGGCGGTTTGCTTTATCTA 59.792 47.619 0.00 0.00 45.43 1.98
1167 2315 0.035820 TCGGGCGGTTTGCTTTATCT 60.036 50.000 0.00 0.00 45.43 1.98
1168 2316 0.377203 CTCGGGCGGTTTGCTTTATC 59.623 55.000 0.00 0.00 45.43 1.75
1169 2317 1.654023 GCTCGGGCGGTTTGCTTTAT 61.654 55.000 0.00 0.00 45.43 1.40
1170 2318 2.329614 GCTCGGGCGGTTTGCTTTA 61.330 57.895 0.00 0.00 45.43 1.85
1171 2319 3.670377 GCTCGGGCGGTTTGCTTT 61.670 61.111 0.00 0.00 45.43 3.51
1175 2323 3.291383 TTTGGCTCGGGCGGTTTG 61.291 61.111 0.00 0.00 39.81 2.93
1176 2324 3.292159 GTTTGGCTCGGGCGGTTT 61.292 61.111 0.00 0.00 39.81 3.27
1177 2325 4.572571 TGTTTGGCTCGGGCGGTT 62.573 61.111 0.00 0.00 39.81 4.44
1182 2330 2.361610 ATGGCTGTTTGGCTCGGG 60.362 61.111 0.00 0.00 42.34 5.14
1183 2331 1.651240 CTGATGGCTGTTTGGCTCGG 61.651 60.000 0.00 0.00 42.34 4.63
1184 2332 0.674581 TCTGATGGCTGTTTGGCTCG 60.675 55.000 0.00 0.00 42.34 5.03
1185 2333 1.093159 CTCTGATGGCTGTTTGGCTC 58.907 55.000 0.00 0.00 42.34 4.70
1186 2334 0.403271 ACTCTGATGGCTGTTTGGCT 59.597 50.000 0.00 0.00 42.34 4.75
1187 2335 1.200948 GAACTCTGATGGCTGTTTGGC 59.799 52.381 0.00 0.00 42.18 4.52
1188 2336 1.815003 GGAACTCTGATGGCTGTTTGG 59.185 52.381 0.00 0.00 0.00 3.28
1189 2337 1.815003 GGGAACTCTGATGGCTGTTTG 59.185 52.381 0.00 0.00 0.00 2.93
1190 2338 1.425066 TGGGAACTCTGATGGCTGTTT 59.575 47.619 0.00 0.00 0.00 2.83
1191 2339 1.067295 TGGGAACTCTGATGGCTGTT 58.933 50.000 0.00 0.00 0.00 3.16
1192 2340 0.326264 GTGGGAACTCTGATGGCTGT 59.674 55.000 0.00 0.00 0.00 4.40
1193 2341 0.325933 TGTGGGAACTCTGATGGCTG 59.674 55.000 0.00 0.00 0.00 4.85
1194 2342 0.326264 GTGTGGGAACTCTGATGGCT 59.674 55.000 0.00 0.00 0.00 4.75
1195 2343 0.036732 TGTGTGGGAACTCTGATGGC 59.963 55.000 0.00 0.00 0.00 4.40
1196 2344 1.072173 TGTGTGTGGGAACTCTGATGG 59.928 52.381 0.00 0.00 0.00 3.51
1197 2345 2.146342 GTGTGTGTGGGAACTCTGATG 58.854 52.381 0.00 0.00 0.00 3.07
1198 2346 1.768275 TGTGTGTGTGGGAACTCTGAT 59.232 47.619 0.00 0.00 0.00 2.90
1199 2347 1.134521 GTGTGTGTGTGGGAACTCTGA 60.135 52.381 0.00 0.00 0.00 3.27
1200 2348 1.299541 GTGTGTGTGTGGGAACTCTG 58.700 55.000 0.00 0.00 0.00 3.35
1201 2349 0.908910 TGTGTGTGTGTGGGAACTCT 59.091 50.000 0.00 0.00 0.00 3.24
1202 2350 1.014352 GTGTGTGTGTGTGGGAACTC 58.986 55.000 0.00 0.00 0.00 3.01
1203 2351 0.326595 TGTGTGTGTGTGTGGGAACT 59.673 50.000 0.00 0.00 0.00 3.01
1204 2352 1.169577 TTGTGTGTGTGTGTGGGAAC 58.830 50.000 0.00 0.00 0.00 3.62
1205 2353 1.542030 GTTTGTGTGTGTGTGTGGGAA 59.458 47.619 0.00 0.00 0.00 3.97
1206 2354 1.169577 GTTTGTGTGTGTGTGTGGGA 58.830 50.000 0.00 0.00 0.00 4.37
1207 2355 0.884514 TGTTTGTGTGTGTGTGTGGG 59.115 50.000 0.00 0.00 0.00 4.61
1208 2356 1.539388 AGTGTTTGTGTGTGTGTGTGG 59.461 47.619 0.00 0.00 0.00 4.17
1209 2357 2.225255 TGAGTGTTTGTGTGTGTGTGTG 59.775 45.455 0.00 0.00 0.00 3.82
1210 2358 2.499197 TGAGTGTTTGTGTGTGTGTGT 58.501 42.857 0.00 0.00 0.00 3.72
1211 2359 3.550950 TTGAGTGTTTGTGTGTGTGTG 57.449 42.857 0.00 0.00 0.00 3.82
1212 2360 3.568007 ACTTTGAGTGTTTGTGTGTGTGT 59.432 39.130 0.00 0.00 0.00 3.72
1213 2361 4.158384 GACTTTGAGTGTTTGTGTGTGTG 58.842 43.478 0.00 0.00 0.00 3.82
1214 2362 3.818210 TGACTTTGAGTGTTTGTGTGTGT 59.182 39.130 0.00 0.00 0.00 3.72
1215 2363 4.158384 GTGACTTTGAGTGTTTGTGTGTG 58.842 43.478 0.00 0.00 0.00 3.82
1216 2364 3.818210 TGTGACTTTGAGTGTTTGTGTGT 59.182 39.130 0.00 0.00 0.00 3.72
1217 2365 4.406069 CTGTGACTTTGAGTGTTTGTGTG 58.594 43.478 0.00 0.00 0.00 3.82
1218 2366 3.119849 GCTGTGACTTTGAGTGTTTGTGT 60.120 43.478 0.00 0.00 0.00 3.72
1219 2367 3.429085 GCTGTGACTTTGAGTGTTTGTG 58.571 45.455 0.00 0.00 0.00 3.33
1220 2368 2.423538 GGCTGTGACTTTGAGTGTTTGT 59.576 45.455 0.00 0.00 0.00 2.83
1221 2369 2.539547 CGGCTGTGACTTTGAGTGTTTG 60.540 50.000 0.00 0.00 0.00 2.93
1222 2370 1.670811 CGGCTGTGACTTTGAGTGTTT 59.329 47.619 0.00 0.00 0.00 2.83
1223 2371 1.299541 CGGCTGTGACTTTGAGTGTT 58.700 50.000 0.00 0.00 0.00 3.32
1224 2372 1.160329 GCGGCTGTGACTTTGAGTGT 61.160 55.000 0.00 0.00 0.00 3.55
1225 2373 1.159713 TGCGGCTGTGACTTTGAGTG 61.160 55.000 0.00 0.00 0.00 3.51
1226 2374 1.146041 TGCGGCTGTGACTTTGAGT 59.854 52.632 0.00 0.00 0.00 3.41
1227 2375 1.159713 TGTGCGGCTGTGACTTTGAG 61.160 55.000 0.00 0.00 0.00 3.02
1228 2376 1.153269 TGTGCGGCTGTGACTTTGA 60.153 52.632 0.00 0.00 0.00 2.69
1229 2377 1.009675 GTGTGCGGCTGTGACTTTG 60.010 57.895 0.00 0.00 0.00 2.77
1230 2378 1.451207 TGTGTGCGGCTGTGACTTT 60.451 52.632 0.00 0.00 0.00 2.66
1231 2379 2.180204 GTGTGTGCGGCTGTGACTT 61.180 57.895 0.00 0.00 0.00 3.01
1232 2380 2.588877 GTGTGTGCGGCTGTGACT 60.589 61.111 0.00 0.00 0.00 3.41
1233 2381 3.649986 GGTGTGTGCGGCTGTGAC 61.650 66.667 0.00 0.00 0.00 3.67
1249 2397 2.493030 CCTACTGGTACCGTGCGG 59.507 66.667 16.47 9.29 42.03 5.69
1250 2398 2.493030 CCCTACTGGTACCGTGCG 59.507 66.667 16.47 9.19 0.00 5.34
1259 2407 2.158755 CCCTCAGCATTAACCCTACTGG 60.159 54.545 0.00 0.00 41.37 4.00
1260 2408 2.746472 GCCCTCAGCATTAACCCTACTG 60.746 54.545 0.00 0.00 42.97 2.74
1261 2409 1.490910 GCCCTCAGCATTAACCCTACT 59.509 52.381 0.00 0.00 42.97 2.57
1262 2410 1.968704 GCCCTCAGCATTAACCCTAC 58.031 55.000 0.00 0.00 42.97 3.18
1274 2422 0.535780 TTGTTGAGCTGTGCCCTCAG 60.536 55.000 0.00 0.00 40.16 3.35
1275 2423 0.535780 CTTGTTGAGCTGTGCCCTCA 60.536 55.000 0.00 0.00 37.54 3.86
1276 2424 2.251600 CTTGTTGAGCTGTGCCCTC 58.748 57.895 0.00 0.00 0.00 4.30
1277 2425 4.488790 CTTGTTGAGCTGTGCCCT 57.511 55.556 0.00 0.00 0.00 5.19
1286 2434 5.507985 CCTTTTGTTCTTAGGGCTTGTTGAG 60.508 44.000 0.00 0.00 0.00 3.02
1287 2435 4.340950 CCTTTTGTTCTTAGGGCTTGTTGA 59.659 41.667 0.00 0.00 0.00 3.18
1288 2436 4.340950 TCCTTTTGTTCTTAGGGCTTGTTG 59.659 41.667 0.00 0.00 0.00 3.33
1289 2437 4.341235 GTCCTTTTGTTCTTAGGGCTTGTT 59.659 41.667 0.00 0.00 30.95 2.83
1290 2438 3.889538 GTCCTTTTGTTCTTAGGGCTTGT 59.110 43.478 0.00 0.00 30.95 3.16
1291 2439 3.888930 TGTCCTTTTGTTCTTAGGGCTTG 59.111 43.478 0.00 0.00 34.73 4.01
1292 2440 3.889538 GTGTCCTTTTGTTCTTAGGGCTT 59.110 43.478 0.00 0.00 34.73 4.35
1293 2441 3.117663 TGTGTCCTTTTGTTCTTAGGGCT 60.118 43.478 0.00 0.00 34.73 5.19
1294 2442 3.004419 GTGTGTCCTTTTGTTCTTAGGGC 59.996 47.826 0.00 0.00 34.23 5.19
1295 2443 4.036380 GTGTGTGTCCTTTTGTTCTTAGGG 59.964 45.833 0.00 0.00 0.00 3.53
1296 2444 4.638421 TGTGTGTGTCCTTTTGTTCTTAGG 59.362 41.667 0.00 0.00 0.00 2.69
1297 2445 5.811399 TGTGTGTGTCCTTTTGTTCTTAG 57.189 39.130 0.00 0.00 0.00 2.18
1298 2446 6.431543 TCTTTGTGTGTGTCCTTTTGTTCTTA 59.568 34.615 0.00 0.00 0.00 2.10
1299 2447 5.242838 TCTTTGTGTGTGTCCTTTTGTTCTT 59.757 36.000 0.00 0.00 0.00 2.52
1300 2448 4.764823 TCTTTGTGTGTGTCCTTTTGTTCT 59.235 37.500 0.00 0.00 0.00 3.01
1301 2449 4.857037 GTCTTTGTGTGTGTCCTTTTGTTC 59.143 41.667 0.00 0.00 0.00 3.18
1302 2450 4.321675 GGTCTTTGTGTGTGTCCTTTTGTT 60.322 41.667 0.00 0.00 0.00 2.83
1303 2451 3.192633 GGTCTTTGTGTGTGTCCTTTTGT 59.807 43.478 0.00 0.00 0.00 2.83
1304 2452 3.730662 CGGTCTTTGTGTGTGTCCTTTTG 60.731 47.826 0.00 0.00 0.00 2.44
1305 2453 2.422127 CGGTCTTTGTGTGTGTCCTTTT 59.578 45.455 0.00 0.00 0.00 2.27
1306 2454 2.014128 CGGTCTTTGTGTGTGTCCTTT 58.986 47.619 0.00 0.00 0.00 3.11
1307 2455 1.663695 CGGTCTTTGTGTGTGTCCTT 58.336 50.000 0.00 0.00 0.00 3.36
1308 2456 0.814010 GCGGTCTTTGTGTGTGTCCT 60.814 55.000 0.00 0.00 0.00 3.85
1309 2457 1.647084 GCGGTCTTTGTGTGTGTCC 59.353 57.895 0.00 0.00 0.00 4.02
1310 2458 1.092921 TGGCGGTCTTTGTGTGTGTC 61.093 55.000 0.00 0.00 0.00 3.67
1311 2459 1.078072 TGGCGGTCTTTGTGTGTGT 60.078 52.632 0.00 0.00 0.00 3.72
1312 2460 1.355210 GTGGCGGTCTTTGTGTGTG 59.645 57.895 0.00 0.00 0.00 3.82
1313 2461 2.177580 CGTGGCGGTCTTTGTGTGT 61.178 57.895 0.00 0.00 0.00 3.72
1314 2462 2.631428 CGTGGCGGTCTTTGTGTG 59.369 61.111 0.00 0.00 0.00 3.82
1315 2463 2.590575 CCGTGGCGGTCTTTGTGT 60.591 61.111 0.00 0.00 42.73 3.72
1316 2464 3.353836 CCCGTGGCGGTCTTTGTG 61.354 66.667 6.82 0.00 46.80 3.33
1317 2465 3.552384 TCCCGTGGCGGTCTTTGT 61.552 61.111 6.82 0.00 46.80 2.83
1318 2466 3.047877 GTCCCGTGGCGGTCTTTG 61.048 66.667 6.82 0.00 46.80 2.77
1319 2467 3.109592 TTGTCCCGTGGCGGTCTTT 62.110 57.895 6.82 0.00 46.80 2.52
1320 2468 3.530910 CTTGTCCCGTGGCGGTCTT 62.531 63.158 6.82 0.00 46.80 3.01
1321 2469 4.003788 CTTGTCCCGTGGCGGTCT 62.004 66.667 6.82 0.00 46.80 3.85
1322 2470 3.524648 TTCTTGTCCCGTGGCGGTC 62.525 63.158 6.82 0.69 46.80 4.79
1323 2471 3.530910 CTTCTTGTCCCGTGGCGGT 62.531 63.158 6.82 0.00 46.80 5.68
1325 2473 3.423154 GCTTCTTGTCCCGTGGCG 61.423 66.667 0.00 0.00 0.00 5.69
1326 2474 3.056328 GGCTTCTTGTCCCGTGGC 61.056 66.667 0.00 0.00 0.00 5.01
1327 2475 1.376037 GAGGCTTCTTGTCCCGTGG 60.376 63.158 0.00 0.00 0.00 4.94
1328 2476 1.738099 CGAGGCTTCTTGTCCCGTG 60.738 63.158 0.00 0.00 0.00 4.94
1329 2477 2.657237 CGAGGCTTCTTGTCCCGT 59.343 61.111 0.00 0.00 0.00 5.28
1330 2478 2.815647 GCGAGGCTTCTTGTCCCG 60.816 66.667 0.00 0.00 0.00 5.14
1558 2712 4.502016 TGCTCAGTAGATCAAGCTTCTTG 58.498 43.478 0.00 0.37 35.76 3.02
1602 2772 9.948964 CCACAATCTAATCCATCACATTAGATA 57.051 33.333 12.98 0.00 46.25 1.98
1604 2774 7.805163 ACCACAATCTAATCCATCACATTAGA 58.195 34.615 4.95 4.95 43.68 2.10
1605 2775 8.455903 AACCACAATCTAATCCATCACATTAG 57.544 34.615 0.00 0.00 35.81 1.73
1606 2776 7.502226 GGAACCACAATCTAATCCATCACATTA 59.498 37.037 0.00 0.00 0.00 1.90
1607 2777 6.322201 GGAACCACAATCTAATCCATCACATT 59.678 38.462 0.00 0.00 0.00 2.71
1611 2781 5.397899 GGAGGAACCACAATCTAATCCATCA 60.398 44.000 0.00 0.00 38.79 3.07
1612 2782 5.066593 GGAGGAACCACAATCTAATCCATC 58.933 45.833 0.00 0.00 38.79 3.51
1628 2798 1.689273 ACTCATATCGCCAGGAGGAAC 59.311 52.381 0.00 0.00 36.89 3.62
1662 2841 7.095481 ACGATACAATATCATCATCACTTGCAC 60.095 37.037 0.00 0.00 0.00 4.57
1693 2882 0.679505 GCCTGAGGACACACTACACA 59.320 55.000 0.65 0.00 0.00 3.72
1694 2883 0.969894 AGCCTGAGGACACACTACAC 59.030 55.000 0.65 0.00 0.00 2.90
1741 2932 5.594317 GTGGCATGGAAATAACATTAGGAGT 59.406 40.000 0.00 0.00 0.00 3.85
1744 2935 5.593909 TGAGTGGCATGGAAATAACATTAGG 59.406 40.000 0.00 0.00 0.00 2.69
1762 2962 7.046652 ACAGAGAGATTCAATAACATGAGTGG 58.953 38.462 0.00 0.00 0.00 4.00
1803 3003 1.271871 TGACCAATGCGATTCCCTGTT 60.272 47.619 0.00 0.00 0.00 3.16
1804 3004 0.327924 TGACCAATGCGATTCCCTGT 59.672 50.000 0.00 0.00 0.00 4.00
1810 3010 7.771183 AGTATTAAATTGTGACCAATGCGATT 58.229 30.769 0.00 0.00 40.42 3.34
1814 3014 9.931210 GTAGTAGTATTAAATTGTGACCAATGC 57.069 33.333 0.00 0.00 40.42 3.56
1827 3027 9.366216 CAACAGATGCACAGTAGTAGTATTAAA 57.634 33.333 0.00 0.00 0.00 1.52
1847 3093 9.899661 ACTAAACATACTAATATTGCCAACAGA 57.100 29.630 0.00 0.00 0.00 3.41
1871 3117 8.462016 GGCATGAACTTATAGAAAATCAACACT 58.538 33.333 0.00 0.00 0.00 3.55
1879 3133 9.241919 TCAGATTTGGCATGAACTTATAGAAAA 57.758 29.630 0.00 0.00 0.00 2.29
1883 3137 9.459640 CAATTCAGATTTGGCATGAACTTATAG 57.540 33.333 3.54 0.00 35.89 1.31
1915 5774 7.603180 TGTCCTGCAGTAGAACATATCTTAT 57.397 36.000 13.81 0.00 39.71 1.73
1935 5800 0.177604 CAGGCTCCTGACAGATGTCC 59.822 60.000 10.33 0.00 46.30 4.02
1936 5801 0.177604 CCAGGCTCCTGACAGATGTC 59.822 60.000 17.08 6.01 46.30 3.06
1967 6515 5.748152 GCTTCATCTACTTCTGAGTCATCAC 59.252 44.000 0.00 0.00 37.33 3.06
1969 6517 6.147864 AGCTTCATCTACTTCTGAGTCATC 57.852 41.667 0.00 0.00 37.33 2.92
1972 6520 5.125417 ACTGAGCTTCATCTACTTCTGAGTC 59.875 44.000 0.00 0.00 37.33 3.36
1973 6521 5.016173 ACTGAGCTTCATCTACTTCTGAGT 58.984 41.667 0.00 0.00 39.97 3.41
1982 6531 3.306294 CCACACACACTGAGCTTCATCTA 60.306 47.826 0.00 0.00 0.00 1.98
1995 6544 0.386476 TACTCCACGTCCACACACAC 59.614 55.000 0.00 0.00 0.00 3.82
1996 6545 1.334160 ATACTCCACGTCCACACACA 58.666 50.000 0.00 0.00 0.00 3.72
1997 6546 2.450609 AATACTCCACGTCCACACAC 57.549 50.000 0.00 0.00 0.00 3.82
1998 6547 2.365941 TCAAATACTCCACGTCCACACA 59.634 45.455 0.00 0.00 0.00 3.72
1999 6548 2.993899 CTCAAATACTCCACGTCCACAC 59.006 50.000 0.00 0.00 0.00 3.82
2000 6549 2.611971 GCTCAAATACTCCACGTCCACA 60.612 50.000 0.00 0.00 0.00 4.17
2001 6550 2.000447 GCTCAAATACTCCACGTCCAC 59.000 52.381 0.00 0.00 0.00 4.02
2002 6551 1.899814 AGCTCAAATACTCCACGTCCA 59.100 47.619 0.00 0.00 0.00 4.02
2003 6552 2.541556 GAGCTCAAATACTCCACGTCC 58.458 52.381 9.40 0.00 0.00 4.79
2004 6553 2.159421 TCGAGCTCAAATACTCCACGTC 60.159 50.000 15.40 0.00 0.00 4.34
2005 6554 1.816835 TCGAGCTCAAATACTCCACGT 59.183 47.619 15.40 0.00 0.00 4.49
2006 6555 2.455032 CTCGAGCTCAAATACTCCACG 58.545 52.381 15.40 0.00 0.00 4.94
2007 6556 2.197577 GCTCGAGCTCAAATACTCCAC 58.802 52.381 29.88 0.00 38.21 4.02
2008 6557 2.586258 GCTCGAGCTCAAATACTCCA 57.414 50.000 29.88 0.00 38.21 3.86
2020 6569 1.285578 GGACTCATTTGAGCTCGAGC 58.714 55.000 30.01 30.01 45.79 5.03
2021 6570 1.554392 CGGACTCATTTGAGCTCGAG 58.446 55.000 8.45 8.45 45.79 4.04
2022 6571 0.458543 GCGGACTCATTTGAGCTCGA 60.459 55.000 20.01 3.88 45.79 4.04
2023 6572 0.737367 TGCGGACTCATTTGAGCTCG 60.737 55.000 9.64 11.79 45.79 5.03
2024 6573 1.329906 CATGCGGACTCATTTGAGCTC 59.670 52.381 6.82 6.82 45.79 4.09
2025 6574 1.065926 TCATGCGGACTCATTTGAGCT 60.066 47.619 7.48 0.00 45.79 4.09
2026 6575 1.372582 TCATGCGGACTCATTTGAGC 58.627 50.000 7.48 1.22 45.79 4.26
2028 6577 2.743664 CTGTTCATGCGGACTCATTTGA 59.256 45.455 0.00 0.00 0.00 2.69
2029 6578 2.485426 ACTGTTCATGCGGACTCATTTG 59.515 45.455 0.00 0.00 0.00 2.32
2030 6579 2.783135 ACTGTTCATGCGGACTCATTT 58.217 42.857 0.00 0.00 0.00 2.32
2031 6580 2.479566 ACTGTTCATGCGGACTCATT 57.520 45.000 0.00 0.00 0.00 2.57
2032 6581 3.610040 TTACTGTTCATGCGGACTCAT 57.390 42.857 0.00 0.00 0.00 2.90
2033 6582 3.394674 TTTACTGTTCATGCGGACTCA 57.605 42.857 0.00 0.00 0.00 3.41
2034 6583 4.391830 TGATTTTACTGTTCATGCGGACTC 59.608 41.667 0.00 0.00 0.00 3.36
2035 6584 4.323417 TGATTTTACTGTTCATGCGGACT 58.677 39.130 0.00 0.00 0.00 3.85
2036 6585 4.678509 TGATTTTACTGTTCATGCGGAC 57.321 40.909 0.00 0.00 0.00 4.79
2037 6586 5.697473 TTTGATTTTACTGTTCATGCGGA 57.303 34.783 0.00 0.00 0.00 5.54
2038 6587 6.761731 TTTTTGATTTTACTGTTCATGCGG 57.238 33.333 0.00 0.00 0.00 5.69
2082 6631 7.158021 AGAACATTTGTCAAAGTCCACAAAAA 58.842 30.769 4.03 0.00 43.79 1.94
2083 6632 6.696411 AGAACATTTGTCAAAGTCCACAAAA 58.304 32.000 4.03 0.00 43.79 2.44
2084 6633 6.279513 AGAACATTTGTCAAAGTCCACAAA 57.720 33.333 4.03 0.05 44.48 2.83
2085 6634 5.913137 AGAACATTTGTCAAAGTCCACAA 57.087 34.783 4.03 0.00 0.00 3.33
2086 6635 6.601613 ACTTAGAACATTTGTCAAAGTCCACA 59.398 34.615 4.03 0.00 0.00 4.17
2087 6636 6.912591 CACTTAGAACATTTGTCAAAGTCCAC 59.087 38.462 4.03 0.00 0.00 4.02
2088 6637 6.459573 GCACTTAGAACATTTGTCAAAGTCCA 60.460 38.462 4.03 0.00 0.00 4.02
2089 6638 5.915196 GCACTTAGAACATTTGTCAAAGTCC 59.085 40.000 4.03 0.00 0.00 3.85
2090 6639 6.729187 AGCACTTAGAACATTTGTCAAAGTC 58.271 36.000 4.03 1.89 0.00 3.01
2091 6640 6.699575 AGCACTTAGAACATTTGTCAAAGT 57.300 33.333 4.03 0.09 0.00 2.66
2092 6641 6.074676 GCAAGCACTTAGAACATTTGTCAAAG 60.075 38.462 4.03 0.00 0.00 2.77
2093 6642 5.748152 GCAAGCACTTAGAACATTTGTCAAA 59.252 36.000 0.00 0.00 0.00 2.69
2094 6643 5.163571 TGCAAGCACTTAGAACATTTGTCAA 60.164 36.000 0.00 0.00 0.00 3.18
2095 6644 4.337836 TGCAAGCACTTAGAACATTTGTCA 59.662 37.500 0.00 0.00 0.00 3.58
2096 6645 4.858935 TGCAAGCACTTAGAACATTTGTC 58.141 39.130 0.00 0.00 0.00 3.18
2097 6646 4.916983 TGCAAGCACTTAGAACATTTGT 57.083 36.364 0.00 0.00 0.00 2.83
2098 6647 6.774354 ATTTGCAAGCACTTAGAACATTTG 57.226 33.333 0.00 0.00 0.00 2.32
2099 6648 7.790823 AAATTTGCAAGCACTTAGAACATTT 57.209 28.000 0.00 0.00 0.00 2.32
2100 6649 7.495279 TGAAAATTTGCAAGCACTTAGAACATT 59.505 29.630 0.00 0.00 0.00 2.71
2101 6650 6.985645 TGAAAATTTGCAAGCACTTAGAACAT 59.014 30.769 0.00 0.00 0.00 2.71
2102 6651 6.336566 TGAAAATTTGCAAGCACTTAGAACA 58.663 32.000 0.00 0.00 0.00 3.18
2103 6652 6.826893 TGAAAATTTGCAAGCACTTAGAAC 57.173 33.333 0.00 0.00 0.00 3.01
2104 6653 7.208777 TGATGAAAATTTGCAAGCACTTAGAA 58.791 30.769 2.14 0.00 0.00 2.10
2105 6654 6.747125 TGATGAAAATTTGCAAGCACTTAGA 58.253 32.000 2.14 0.00 0.00 2.10
2106 6655 7.383029 TCTTGATGAAAATTTGCAAGCACTTAG 59.617 33.333 2.14 0.59 36.72 2.18
2107 6656 7.208777 TCTTGATGAAAATTTGCAAGCACTTA 58.791 30.769 2.14 0.00 36.72 2.24
2108 6657 6.050432 TCTTGATGAAAATTTGCAAGCACTT 58.950 32.000 2.14 0.00 36.72 3.16
2109 6658 5.603596 TCTTGATGAAAATTTGCAAGCACT 58.396 33.333 2.14 0.00 36.72 4.40
2110 6659 5.693104 TCTCTTGATGAAAATTTGCAAGCAC 59.307 36.000 2.14 0.00 36.72 4.40
2111 6660 5.845103 TCTCTTGATGAAAATTTGCAAGCA 58.155 33.333 2.14 2.02 36.72 3.91
2112 6661 6.588756 TGATCTCTTGATGAAAATTTGCAAGC 59.411 34.615 2.14 0.00 36.72 4.01
2113 6662 7.813148 AGTGATCTCTTGATGAAAATTTGCAAG 59.187 33.333 2.14 9.39 37.79 4.01
2114 6663 7.663827 AGTGATCTCTTGATGAAAATTTGCAA 58.336 30.769 2.14 0.00 32.19 4.08
2115 6664 7.223260 AGTGATCTCTTGATGAAAATTTGCA 57.777 32.000 0.07 0.07 32.19 4.08
2116 6665 8.530269 AAAGTGATCTCTTGATGAAAATTTGC 57.470 30.769 10.64 0.00 32.19 3.68
2121 6670 9.740239 CTTTCAAAAGTGATCTCTTGATGAAAA 57.260 29.630 28.74 20.76 39.95 2.29
2122 6671 7.864379 GCTTTCAAAAGTGATCTCTTGATGAAA 59.136 33.333 28.06 28.06 39.22 2.69
2123 6672 7.013559 TGCTTTCAAAAGTGATCTCTTGATGAA 59.986 33.333 22.41 22.41 38.28 2.57
2124 6673 6.487668 TGCTTTCAAAAGTGATCTCTTGATGA 59.512 34.615 10.64 14.10 38.28 2.92
2125 6674 6.675026 TGCTTTCAAAAGTGATCTCTTGATG 58.325 36.000 10.64 12.32 38.28 3.07
2126 6675 6.889301 TGCTTTCAAAAGTGATCTCTTGAT 57.111 33.333 10.64 1.19 38.28 2.57
2127 6676 6.889301 ATGCTTTCAAAAGTGATCTCTTGA 57.111 33.333 10.64 3.26 38.28 3.02
2128 6677 7.941795 AAATGCTTTCAAAAGTGATCTCTTG 57.058 32.000 10.64 0.90 38.28 3.02
2129 6678 7.440255 CCAAAATGCTTTCAAAAGTGATCTCTT 59.560 33.333 4.18 4.18 38.28 2.85
2130 6679 6.927381 CCAAAATGCTTTCAAAAGTGATCTCT 59.073 34.615 4.54 0.00 38.28 3.10
2131 6680 6.925165 TCCAAAATGCTTTCAAAAGTGATCTC 59.075 34.615 4.54 0.00 38.28 2.75
2132 6681 6.819284 TCCAAAATGCTTTCAAAAGTGATCT 58.181 32.000 4.54 0.00 38.28 2.75
2133 6682 6.347160 GCTCCAAAATGCTTTCAAAAGTGATC 60.347 38.462 4.54 0.00 38.28 2.92
2134 6683 5.467735 GCTCCAAAATGCTTTCAAAAGTGAT 59.532 36.000 4.54 0.00 38.28 3.06
2135 6684 4.810491 GCTCCAAAATGCTTTCAAAAGTGA 59.190 37.500 4.54 0.00 38.28 3.41
2136 6685 4.571580 TGCTCCAAAATGCTTTCAAAAGTG 59.428 37.500 4.54 0.00 38.28 3.16
2137 6686 4.571984 GTGCTCCAAAATGCTTTCAAAAGT 59.428 37.500 4.54 0.00 38.28 2.66
2138 6687 4.812626 AGTGCTCCAAAATGCTTTCAAAAG 59.187 37.500 0.00 0.00 39.03 2.27
2139 6688 4.768583 AGTGCTCCAAAATGCTTTCAAAA 58.231 34.783 0.00 0.00 0.00 2.44
2140 6689 4.405116 AGTGCTCCAAAATGCTTTCAAA 57.595 36.364 0.00 0.00 0.00 2.69
2141 6690 5.726980 ATAGTGCTCCAAAATGCTTTCAA 57.273 34.783 0.00 0.00 0.00 2.69
2142 6691 5.726980 AATAGTGCTCCAAAATGCTTTCA 57.273 34.783 0.00 0.00 0.00 2.69
2143 6692 7.041848 ACAAAAATAGTGCTCCAAAATGCTTTC 60.042 33.333 0.00 0.00 0.00 2.62
2144 6693 6.767423 ACAAAAATAGTGCTCCAAAATGCTTT 59.233 30.769 0.00 0.00 0.00 3.51
2145 6694 6.290605 ACAAAAATAGTGCTCCAAAATGCTT 58.709 32.000 0.00 0.00 0.00 3.91
2146 6695 5.857268 ACAAAAATAGTGCTCCAAAATGCT 58.143 33.333 0.00 0.00 0.00 3.79
2147 6696 6.544038 AACAAAAATAGTGCTCCAAAATGC 57.456 33.333 0.00 0.00 0.00 3.56
2171 6720 0.526524 CGTGAAAGGCGTGGCAAAAA 60.527 50.000 0.00 0.00 0.00 1.94
2172 6721 1.064946 CGTGAAAGGCGTGGCAAAA 59.935 52.632 0.00 0.00 0.00 2.44
2173 6722 1.377366 TTCGTGAAAGGCGTGGCAAA 61.377 50.000 0.00 0.00 0.00 3.68
2174 6723 1.169661 ATTCGTGAAAGGCGTGGCAA 61.170 50.000 0.00 0.00 0.00 4.52
2175 6724 1.599518 ATTCGTGAAAGGCGTGGCA 60.600 52.632 0.00 0.00 0.00 4.92
2176 6725 1.154225 CATTCGTGAAAGGCGTGGC 60.154 57.895 0.00 0.00 0.00 5.01
2177 6726 0.110238 CACATTCGTGAAAGGCGTGG 60.110 55.000 0.00 0.00 46.80 4.94
2178 6727 3.366392 CACATTCGTGAAAGGCGTG 57.634 52.632 0.00 0.00 46.80 5.34
2187 6736 3.192466 TCATCATGAGCTCACATTCGTG 58.808 45.455 20.97 12.59 45.08 4.35
2188 6737 3.531934 TCATCATGAGCTCACATTCGT 57.468 42.857 20.97 0.00 0.00 3.85
2189 6738 4.870221 TTTCATCATGAGCTCACATTCG 57.130 40.909 20.97 7.10 0.00 3.34
2190 6739 7.464178 GCAAATTTTCATCATGAGCTCACATTC 60.464 37.037 20.97 0.00 0.00 2.67
2191 6740 6.312918 GCAAATTTTCATCATGAGCTCACATT 59.687 34.615 20.97 0.00 0.00 2.71
2192 6741 5.810587 GCAAATTTTCATCATGAGCTCACAT 59.189 36.000 20.97 11.47 0.00 3.21
2193 6742 5.165676 GCAAATTTTCATCATGAGCTCACA 58.834 37.500 20.97 9.32 0.00 3.58
2194 6743 5.165676 TGCAAATTTTCATCATGAGCTCAC 58.834 37.500 20.97 1.08 0.00 3.51
2195 6744 5.394224 TGCAAATTTTCATCATGAGCTCA 57.606 34.783 20.79 20.79 0.00 4.26
2196 6745 6.146510 TGTTTGCAAATTTTCATCATGAGCTC 59.853 34.615 16.21 6.82 0.00 4.09
2197 6746 5.992829 TGTTTGCAAATTTTCATCATGAGCT 59.007 32.000 16.21 0.00 0.00 4.09
2198 6747 6.073440 AGTGTTTGCAAATTTTCATCATGAGC 60.073 34.615 16.21 0.00 0.00 4.26
2199 6748 7.416154 AGTGTTTGCAAATTTTCATCATGAG 57.584 32.000 16.21 0.00 0.00 2.90
2200 6749 7.789273 AAGTGTTTGCAAATTTTCATCATGA 57.211 28.000 16.21 0.00 0.00 3.07
2211 6760 9.539825 TGACAAATGTTATAAGTGTTTGCAAAT 57.460 25.926 16.21 1.29 34.12 2.32
2212 6761 8.932945 TGACAAATGTTATAAGTGTTTGCAAA 57.067 26.923 8.05 8.05 34.12 3.68
2213 6762 8.932945 TTGACAAATGTTATAAGTGTTTGCAA 57.067 26.923 0.00 0.00 34.12 4.08
2214 6763 8.932945 TTTGACAAATGTTATAAGTGTTTGCA 57.067 26.923 13.15 10.60 34.12 4.08
2215 6764 9.030301 ACTTTGACAAATGTTATAAGTGTTTGC 57.970 29.630 0.05 9.04 34.12 3.68
2278 6827 9.421806 TCGATGAATAGCAAATCAAAAACAAAT 57.578 25.926 0.00 0.00 0.00 2.32
2279 6828 8.809159 TCGATGAATAGCAAATCAAAAACAAA 57.191 26.923 0.00 0.00 0.00 2.83
2280 6829 7.062138 GCTCGATGAATAGCAAATCAAAAACAA 59.938 33.333 0.00 0.00 38.63 2.83
2281 6830 6.527722 GCTCGATGAATAGCAAATCAAAAACA 59.472 34.615 0.00 0.00 38.63 2.83
2282 6831 6.749118 AGCTCGATGAATAGCAAATCAAAAAC 59.251 34.615 0.00 0.00 41.32 2.43
2283 6832 6.855836 AGCTCGATGAATAGCAAATCAAAAA 58.144 32.000 0.00 0.00 41.32 1.94
2284 6833 6.093909 TGAGCTCGATGAATAGCAAATCAAAA 59.906 34.615 9.64 0.00 41.32 2.44
2285 6834 5.585844 TGAGCTCGATGAATAGCAAATCAAA 59.414 36.000 9.64 0.00 41.32 2.69
2286 6835 5.118286 TGAGCTCGATGAATAGCAAATCAA 58.882 37.500 9.64 0.00 41.32 2.57
2287 6836 4.696455 TGAGCTCGATGAATAGCAAATCA 58.304 39.130 9.64 0.00 41.32 2.57
2288 6837 4.987285 TCTGAGCTCGATGAATAGCAAATC 59.013 41.667 9.64 0.00 41.32 2.17
2289 6838 4.953667 TCTGAGCTCGATGAATAGCAAAT 58.046 39.130 9.64 0.00 41.32 2.32
2290 6839 4.391405 TCTGAGCTCGATGAATAGCAAA 57.609 40.909 9.64 0.00 41.32 3.68
2291 6840 4.038402 TCATCTGAGCTCGATGAATAGCAA 59.962 41.667 31.11 17.35 42.97 3.91
2292 6841 3.571401 TCATCTGAGCTCGATGAATAGCA 59.429 43.478 31.11 17.83 42.97 3.49
2293 6842 4.168014 CTCATCTGAGCTCGATGAATAGC 58.832 47.826 31.78 4.30 44.62 2.97
2306 6855 3.383092 GGGCTTGAGCTCATCTGAG 57.617 57.895 19.04 13.03 42.27 3.35
2323 6872 3.250040 CACACTCGAAAGTACCCTTTTGG 59.750 47.826 3.31 0.00 40.98 3.28
2324 6873 3.875134 ACACACTCGAAAGTACCCTTTTG 59.125 43.478 0.00 0.00 40.98 2.44
2325 6874 4.146745 ACACACTCGAAAGTACCCTTTT 57.853 40.909 0.00 0.00 40.98 2.27
2326 6875 3.832615 ACACACTCGAAAGTACCCTTT 57.167 42.857 0.00 0.00 43.58 3.11
2327 6876 3.893813 ACTACACACTCGAAAGTACCCTT 59.106 43.478 0.00 0.00 33.25 3.95
2328 6877 3.494332 ACTACACACTCGAAAGTACCCT 58.506 45.455 0.00 0.00 33.25 4.34
2329 6878 3.254166 TGACTACACACTCGAAAGTACCC 59.746 47.826 0.00 0.00 33.25 3.69
2330 6879 4.494350 TGACTACACACTCGAAAGTACC 57.506 45.455 0.00 0.00 33.25 3.34
2331 6880 7.060403 GTGTTATGACTACACACTCGAAAGTAC 59.940 40.741 0.00 0.00 44.08 2.73
2332 6881 7.040892 AGTGTTATGACTACACACTCGAAAGTA 60.041 37.037 8.61 0.00 46.42 2.24
2333 6882 5.919141 GTGTTATGACTACACACTCGAAAGT 59.081 40.000 0.00 0.00 44.08 2.66
2334 6883 6.150318 AGTGTTATGACTACACACTCGAAAG 58.850 40.000 8.61 0.00 46.42 2.62
2335 6884 6.080648 AGTGTTATGACTACACACTCGAAA 57.919 37.500 8.61 0.00 46.42 3.46
2336 6885 5.700722 AGTGTTATGACTACACACTCGAA 57.299 39.130 8.61 0.00 46.42 3.71
2337 6886 6.128090 CCTTAGTGTTATGACTACACACTCGA 60.128 42.308 7.43 0.00 46.42 4.04
2338 6887 6.028368 CCTTAGTGTTATGACTACACACTCG 58.972 44.000 7.43 1.71 46.42 4.18
2339 6888 6.807230 CACCTTAGTGTTATGACTACACACTC 59.193 42.308 7.43 0.00 46.42 3.51
2340 6889 6.688578 CACCTTAGTGTTATGACTACACACT 58.311 40.000 9.04 9.04 46.42 3.55
2341 6890 6.946229 CACCTTAGTGTTATGACTACACAC 57.054 41.667 8.61 0.00 46.42 3.82
2404 7132 5.653507 GCAGTTAAAGCCATGAATGAATGA 58.346 37.500 0.00 0.00 0.00 2.57
2405 7133 4.501559 CGCAGTTAAAGCCATGAATGAATG 59.498 41.667 0.00 0.00 0.00 2.67
2406 7134 4.675510 CGCAGTTAAAGCCATGAATGAAT 58.324 39.130 0.00 0.00 0.00 2.57
2407 7135 3.673052 GCGCAGTTAAAGCCATGAATGAA 60.673 43.478 0.30 0.00 0.00 2.57
2426 7154 4.545483 CGCGTGTATTTAGTGCGC 57.455 55.556 0.00 0.00 42.42 6.09
2441 7176 4.054780 TCTCCACATAACAGGATAACGC 57.945 45.455 0.00 0.00 32.53 4.84
2445 7180 5.628797 TTGCATCTCCACATAACAGGATA 57.371 39.130 0.00 0.00 32.53 2.59
2446 7181 4.508551 TTGCATCTCCACATAACAGGAT 57.491 40.909 0.00 0.00 32.53 3.24
2453 7192 7.980662 CCAAAATAACAATTGCATCTCCACATA 59.019 33.333 5.05 0.00 0.00 2.29
2470 7209 7.007117 GCATTCGCTTTTGTTACCAAAATAAC 58.993 34.615 0.00 0.00 46.47 1.89
2473 7212 5.053145 TGCATTCGCTTTTGTTACCAAAAT 58.947 33.333 0.00 0.00 46.47 1.82
2478 7217 2.345341 GCATGCATTCGCTTTTGTTACC 59.655 45.455 14.21 0.00 39.64 2.85
2479 7218 3.244976 AGCATGCATTCGCTTTTGTTAC 58.755 40.909 21.98 0.00 39.64 2.50
2527 7272 1.610522 ACAAACCAGTCAGCAATCAGC 59.389 47.619 0.00 0.00 46.19 4.26
2528 7273 3.635331 CAACAAACCAGTCAGCAATCAG 58.365 45.455 0.00 0.00 0.00 2.90
2529 7274 2.223782 GCAACAAACCAGTCAGCAATCA 60.224 45.455 0.00 0.00 0.00 2.57
2530 7275 2.223782 TGCAACAAACCAGTCAGCAATC 60.224 45.455 0.00 0.00 32.07 2.67
2544 7289 4.586421 TGGAAAACTATGACCATGCAACAA 59.414 37.500 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.