Multiple sequence alignment - TraesCS7D01G448100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G448100 chr7D 100.000 2122 0 0 506 2627 568185939 568183818 0.000000e+00 3919.0
1 TraesCS7D01G448100 chr7D 84.478 1340 177 24 641 1972 568236166 568234850 0.000000e+00 1293.0
2 TraesCS7D01G448100 chr7D 81.928 1245 161 38 641 1857 568463851 568462643 0.000000e+00 994.0
3 TraesCS7D01G448100 chr7D 81.301 1230 168 28 646 1855 568324165 568322978 0.000000e+00 941.0
4 TraesCS7D01G448100 chr7D 100.000 179 0 0 1 179 568186444 568186266 5.420000e-87 331.0
5 TraesCS7D01G448100 chr7D 97.279 147 4 0 2187 2333 101582885 101582739 1.560000e-62 250.0
6 TraesCS7D01G448100 chr7D 96.610 118 3 1 1969 2085 445784963 445784846 7.420000e-46 195.0
7 TraesCS7D01G448100 chr7D 79.444 180 35 2 1 179 585377249 585377071 2.740000e-25 126.0
8 TraesCS7D01G448100 chr7D 79.787 94 15 3 88 179 511278475 511278384 6.070000e-07 65.8
9 TraesCS7D01G448100 chr7A 93.829 1183 55 8 509 1690 655452388 655451223 0.000000e+00 1764.0
10 TraesCS7D01G448100 chr7A 81.629 1203 137 48 706 1891 654503691 654502556 0.000000e+00 920.0
11 TraesCS7D01G448100 chr7A 80.763 1232 172 33 646 1855 656982026 656983214 0.000000e+00 902.0
12 TraesCS7D01G448100 chr7A 95.070 284 9 4 1692 1972 655450338 655450057 2.400000e-120 442.0
13 TraesCS7D01G448100 chr7A 92.079 202 4 2 2335 2536 655450057 655449868 9.260000e-70 274.0
14 TraesCS7D01G448100 chr7A 91.061 179 16 0 1 179 655452661 655452483 2.610000e-60 243.0
15 TraesCS7D01G448100 chr7A 87.619 105 13 0 1 105 536782854 536782958 3.550000e-24 122.0
16 TraesCS7D01G448100 chr7A 100.000 30 0 0 149 178 102539408 102539437 3.650000e-04 56.5
17 TraesCS7D01G448100 chr7B 83.159 1342 191 21 641 1972 623271264 623269948 0.000000e+00 1194.0
18 TraesCS7D01G448100 chr7B 83.629 1295 179 22 641 1925 623485666 623484395 0.000000e+00 1186.0
19 TraesCS7D01G448100 chr7B 82.252 1341 207 22 641 1972 623059668 623058350 0.000000e+00 1129.0
20 TraesCS7D01G448100 chr7B 82.199 1337 183 27 641 1972 623102419 623101133 0.000000e+00 1099.0
21 TraesCS7D01G448100 chr7B 94.345 672 36 2 509 1180 622838377 622837708 0.000000e+00 1029.0
22 TraesCS7D01G448100 chr7B 80.321 1245 173 37 641 1855 623934254 623933052 0.000000e+00 876.0
23 TraesCS7D01G448100 chr7B 84.733 786 112 5 641 1426 623537695 623536918 0.000000e+00 780.0
24 TraesCS7D01G448100 chr7B 84.606 786 113 6 641 1426 623523242 623522465 0.000000e+00 774.0
25 TraesCS7D01G448100 chr7B 93.224 487 22 6 1176 1661 622832941 622832465 0.000000e+00 706.0
26 TraesCS7D01G448100 chr7B 82.704 636 92 12 1295 1921 586929659 586930285 1.370000e-152 549.0
27 TraesCS7D01G448100 chr7B 83.794 506 63 13 1474 1972 623522373 623521880 1.840000e-126 462.0
28 TraesCS7D01G448100 chr7B 83.366 505 66 12 1474 1972 623536812 623536320 3.990000e-123 451.0
29 TraesCS7D01G448100 chr7B 92.969 128 6 3 2069 2194 733752329 733752203 1.610000e-42 183.0
30 TraesCS7D01G448100 chr7B 93.269 104 2 2 2528 2627 622832145 622832043 5.860000e-32 148.0
31 TraesCS7D01G448100 chr2D 97.297 148 4 0 2187 2334 204112798 204112945 4.340000e-63 252.0
32 TraesCS7D01G448100 chr2D 86.592 179 24 0 1 179 185354530 185354352 5.740000e-47 198.0
33 TraesCS7D01G448100 chr2D 95.868 121 3 2 1966 2085 10825429 10825548 7.420000e-46 195.0
34 TraesCS7D01G448100 chr2D 98.165 109 2 0 2082 2190 111321405 111321513 9.600000e-45 191.0
35 TraesCS7D01G448100 chr2D 83.060 183 26 4 1 179 527641173 527640992 7.520000e-36 161.0
36 TraesCS7D01G448100 chr2D 87.500 80 10 0 517 596 484317772 484317693 2.780000e-15 93.5
37 TraesCS7D01G448100 chrUn 97.279 147 4 0 2187 2333 68758225 68758079 1.560000e-62 250.0
38 TraesCS7D01G448100 chr4D 97.279 147 4 0 2187 2333 20973335 20973481 1.560000e-62 250.0
39 TraesCS7D01G448100 chr4D 97.279 147 4 0 2189 2335 37936614 37936760 1.560000e-62 250.0
40 TraesCS7D01G448100 chr4D 87.273 110 12 2 2 110 434281278 434281386 9.870000e-25 124.0
41 TraesCS7D01G448100 chr4D 87.838 74 9 0 517 590 185795792 185795865 1.300000e-13 87.9
42 TraesCS7D01G448100 chr1D 97.279 147 4 0 2187 2333 284505183 284505329 1.560000e-62 250.0
43 TraesCS7D01G448100 chr1D 96.522 115 3 1 2076 2190 414643235 414643348 3.450000e-44 189.0
44 TraesCS7D01G448100 chr1D 84.024 169 25 1 1 167 427920667 427920835 7.520000e-36 161.0
45 TraesCS7D01G448100 chr1D 89.189 74 8 0 517 590 196219605 196219532 2.780000e-15 93.5
46 TraesCS7D01G448100 chr1D 86.250 80 11 0 517 596 153222725 153222804 1.300000e-13 87.9
47 TraesCS7D01G448100 chr1D 85.366 82 8 4 516 595 127191669 127191590 6.030000e-12 82.4
48 TraesCS7D01G448100 chr1D 82.353 68 10 2 113 179 305220045 305220111 1.020000e-04 58.4
49 TraesCS7D01G448100 chr3D 96.078 153 5 1 2187 2339 168354776 168354625 5.610000e-62 248.0
50 TraesCS7D01G448100 chr3D 96.078 153 4 2 2187 2337 282527648 282527800 5.610000e-62 248.0
51 TraesCS7D01G448100 chr3D 86.916 107 12 2 1 105 589573635 589573529 4.590000e-23 119.0
52 TraesCS7D01G448100 chr3D 87.654 81 10 0 517 597 519155665 519155745 7.740000e-16 95.3
53 TraesCS7D01G448100 chr3D 78.295 129 24 4 53 179 75160683 75160809 2.170000e-11 80.5
54 TraesCS7D01G448100 chr3D 100.000 28 0 0 597 624 563044211 563044238 5.000000e-03 52.8
55 TraesCS7D01G448100 chr5D 96.599 147 5 0 2187 2333 362106695 362106841 7.260000e-61 244.0
56 TraesCS7D01G448100 chr5D 97.458 118 2 1 1969 2085 126262949 126262832 1.590000e-47 200.0
57 TraesCS7D01G448100 chr5D 95.868 121 4 1 1966 2085 31812140 31812260 7.420000e-46 195.0
58 TraesCS7D01G448100 chr5D 96.610 118 3 1 1969 2085 512977222 512977105 7.420000e-46 195.0
59 TraesCS7D01G448100 chr5D 96.610 118 3 1 1969 2085 552969961 552969844 7.420000e-46 195.0
60 TraesCS7D01G448100 chr5D 98.198 111 1 1 2084 2194 94343223 94343114 2.670000e-45 193.0
61 TraesCS7D01G448100 chr5D 98.165 109 2 0 2083 2191 408792001 408791893 9.600000e-45 191.0
62 TraesCS7D01G448100 chr5D 83.654 104 17 0 1 104 534098500 534098397 5.980000e-17 99.0
63 TraesCS7D01G448100 chr5D 87.500 80 10 0 517 596 161305986 161305907 2.780000e-15 93.5
64 TraesCS7D01G448100 chr4A 95.902 122 2 3 1966 2085 622287945 622287825 7.420000e-46 195.0
65 TraesCS7D01G448100 chr4A 95.868 121 4 1 1966 2085 683963423 683963543 7.420000e-46 195.0
66 TraesCS7D01G448100 chr4A 87.037 108 14 0 2 109 508005513 508005406 3.550000e-24 122.0
67 TraesCS7D01G448100 chr4A 86.598 97 11 1 517 613 725799865 725799959 3.580000e-19 106.0
68 TraesCS7D01G448100 chr4A 96.774 31 1 0 149 179 492373849 492373879 5.000000e-03 52.8
69 TraesCS7D01G448100 chr1B 94.488 127 6 1 1960 2085 43453868 43453994 7.420000e-46 195.0
70 TraesCS7D01G448100 chr1B 95.726 117 4 1 2075 2191 342877276 342877391 1.240000e-43 187.0
71 TraesCS7D01G448100 chr1B 94.958 119 5 1 2077 2195 283119063 283119180 4.460000e-43 185.0
72 TraesCS7D01G448100 chr1B 83.077 65 9 2 116 179 52759527 52759464 1.020000e-04 58.4
73 TraesCS7D01G448100 chr6D 98.182 110 2 0 2081 2190 397359925 397359816 2.670000e-45 193.0
74 TraesCS7D01G448100 chr6D 86.250 80 11 0 517 596 338697383 338697304 1.300000e-13 87.9
75 TraesCS7D01G448100 chr6D 100.000 28 0 0 597 624 235137325 235137352 5.000000e-03 52.8
76 TraesCS7D01G448100 chr5B 96.491 114 4 0 2077 2190 474610254 474610367 3.450000e-44 189.0
77 TraesCS7D01G448100 chr5B 86.364 110 11 3 1 108 524453066 524452959 1.650000e-22 117.0
78 TraesCS7D01G448100 chr5B 86.364 110 11 3 1 108 524554931 524554824 1.650000e-22 117.0
79 TraesCS7D01G448100 chr5B 87.778 90 10 1 3 92 529538286 529538374 1.290000e-18 104.0
80 TraesCS7D01G448100 chr6A 91.358 81 6 1 517 596 455724986 455724906 2.760000e-20 110.0
81 TraesCS7D01G448100 chr6A 88.750 80 9 0 517 596 551695838 551695759 5.980000e-17 99.0
82 TraesCS7D01G448100 chr6B 87.654 81 10 0 517 597 432480830 432480750 7.740000e-16 95.3
83 TraesCS7D01G448100 chr1A 85.135 74 11 0 517 590 511411859 511411786 2.800000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G448100 chr7D 568183818 568186444 2626 True 2125.00 3919 100.00000 1 2627 2 chr7D.!!$R8 2626
1 TraesCS7D01G448100 chr7D 568234850 568236166 1316 True 1293.00 1293 84.47800 641 1972 1 chr7D.!!$R4 1331
2 TraesCS7D01G448100 chr7D 568462643 568463851 1208 True 994.00 994 81.92800 641 1857 1 chr7D.!!$R6 1216
3 TraesCS7D01G448100 chr7D 568322978 568324165 1187 True 941.00 941 81.30100 646 1855 1 chr7D.!!$R5 1209
4 TraesCS7D01G448100 chr7A 654502556 654503691 1135 True 920.00 920 81.62900 706 1891 1 chr7A.!!$R1 1185
5 TraesCS7D01G448100 chr7A 656982026 656983214 1188 False 902.00 902 80.76300 646 1855 1 chr7A.!!$F3 1209
6 TraesCS7D01G448100 chr7A 655449868 655452661 2793 True 680.75 1764 93.00975 1 2536 4 chr7A.!!$R2 2535
7 TraesCS7D01G448100 chr7B 623269948 623271264 1316 True 1194.00 1194 83.15900 641 1972 1 chr7B.!!$R4 1331
8 TraesCS7D01G448100 chr7B 623484395 623485666 1271 True 1186.00 1186 83.62900 641 1925 1 chr7B.!!$R5 1284
9 TraesCS7D01G448100 chr7B 623058350 623059668 1318 True 1129.00 1129 82.25200 641 1972 1 chr7B.!!$R2 1331
10 TraesCS7D01G448100 chr7B 623101133 623102419 1286 True 1099.00 1099 82.19900 641 1972 1 chr7B.!!$R3 1331
11 TraesCS7D01G448100 chr7B 622837708 622838377 669 True 1029.00 1029 94.34500 509 1180 1 chr7B.!!$R1 671
12 TraesCS7D01G448100 chr7B 623933052 623934254 1202 True 876.00 876 80.32100 641 1855 1 chr7B.!!$R6 1214
13 TraesCS7D01G448100 chr7B 623521880 623523242 1362 True 618.00 774 84.20000 641 1972 2 chr7B.!!$R9 1331
14 TraesCS7D01G448100 chr7B 623536320 623537695 1375 True 615.50 780 84.04950 641 1972 2 chr7B.!!$R10 1331
15 TraesCS7D01G448100 chr7B 586929659 586930285 626 False 549.00 549 82.70400 1295 1921 1 chr7B.!!$F1 626
16 TraesCS7D01G448100 chr7B 622832043 622832941 898 True 427.00 706 93.24650 1176 2627 2 chr7B.!!$R8 1451

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
169 170 2.297315 TGTTTGAAATGTATGCGGGCAA 59.703 40.909 0.0 0.0 0.0 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2081 3284 0.038744 TTCCGAACGGAGGGAGTACT 59.961 55.0 15.34 0.0 46.06 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 7.864686 ACGGTCACATAGTTTTACCTTTTTAC 58.135 34.615 0.00 0.00 0.00 2.01
163 164 7.121272 GCTGCATAAATGTTTGAAATGTATGC 58.879 34.615 10.37 10.37 45.56 3.14
169 170 2.297315 TGTTTGAAATGTATGCGGGCAA 59.703 40.909 0.00 0.00 0.00 4.52
556 557 7.417229 CCAACAAATTTGCCAAGGGTAATTTTT 60.417 33.333 18.12 0.00 31.94 1.94
624 625 6.243216 ACGGAGGGAGTAGATAGATAGATC 57.757 45.833 0.00 0.00 0.00 2.75
625 626 5.968167 ACGGAGGGAGTAGATAGATAGATCT 59.032 44.000 0.00 0.00 39.54 2.75
975 982 3.803186 ATCCATCTATGAGCAAAGGGG 57.197 47.619 0.00 0.00 0.00 4.79
1016 1023 3.963374 TGGCTGCTATATATAGAGGCTGG 59.037 47.826 26.92 13.79 35.82 4.85
1023 1030 2.496679 ATATAGAGGCTGGGTGGTGT 57.503 50.000 0.00 0.00 0.00 4.16
1047 1054 6.054860 AGAAGTCCTGCATAAACACATACT 57.945 37.500 0.00 0.00 0.00 2.12
1427 1439 7.744087 TGCAGGTTGGTATATTGTCATATTC 57.256 36.000 0.00 0.00 0.00 1.75
1428 1440 7.286313 TGCAGGTTGGTATATTGTCATATTCA 58.714 34.615 0.00 0.00 0.00 2.57
1441 1507 0.442310 ATATTCACACACACACGCGC 59.558 50.000 5.73 0.00 0.00 6.86
1665 1896 2.754002 TCGAGATGAATGGCATTTGCAA 59.246 40.909 14.93 0.00 44.36 4.08
1750 2878 7.228507 TGCATTGGTATGATTACTGGTTATCAC 59.771 37.037 4.85 0.00 32.39 3.06
1830 3030 2.125512 GGCATGTCCTCGTCGCTT 60.126 61.111 0.00 0.00 0.00 4.68
1978 3181 8.376270 AGGAATTAATCTTTATTACTCCCTCCG 58.624 37.037 0.00 0.00 33.72 4.63
1979 3182 8.155510 GGAATTAATCTTTATTACTCCCTCCGT 58.844 37.037 0.00 0.00 30.24 4.69
1980 3183 9.557061 GAATTAATCTTTATTACTCCCTCCGTT 57.443 33.333 0.00 0.00 0.00 4.44
1981 3184 9.916360 AATTAATCTTTATTACTCCCTCCGTTT 57.084 29.630 0.00 0.00 0.00 3.60
1982 3185 8.953368 TTAATCTTTATTACTCCCTCCGTTTC 57.047 34.615 0.00 0.00 0.00 2.78
1983 3186 6.809976 ATCTTTATTACTCCCTCCGTTTCT 57.190 37.500 0.00 0.00 0.00 2.52
1984 3187 6.616237 TCTTTATTACTCCCTCCGTTTCTT 57.384 37.500 0.00 0.00 0.00 2.52
1985 3188 7.012661 TCTTTATTACTCCCTCCGTTTCTTT 57.987 36.000 0.00 0.00 0.00 2.52
1986 3189 7.455891 TCTTTATTACTCCCTCCGTTTCTTTT 58.544 34.615 0.00 0.00 0.00 2.27
1987 3190 7.940688 TCTTTATTACTCCCTCCGTTTCTTTTT 59.059 33.333 0.00 0.00 0.00 1.94
1988 3191 9.223099 CTTTATTACTCCCTCCGTTTCTTTTTA 57.777 33.333 0.00 0.00 0.00 1.52
1989 3192 8.552083 TTATTACTCCCTCCGTTTCTTTTTAC 57.448 34.615 0.00 0.00 0.00 2.01
1990 3193 4.701651 ACTCCCTCCGTTTCTTTTTACT 57.298 40.909 0.00 0.00 0.00 2.24
1991 3194 5.045012 ACTCCCTCCGTTTCTTTTTACTT 57.955 39.130 0.00 0.00 0.00 2.24
1992 3195 5.061853 ACTCCCTCCGTTTCTTTTTACTTC 58.938 41.667 0.00 0.00 0.00 3.01
1993 3196 5.038651 TCCCTCCGTTTCTTTTTACTTCA 57.961 39.130 0.00 0.00 0.00 3.02
1994 3197 4.818005 TCCCTCCGTTTCTTTTTACTTCAC 59.182 41.667 0.00 0.00 0.00 3.18
1995 3198 4.577283 CCCTCCGTTTCTTTTTACTTCACA 59.423 41.667 0.00 0.00 0.00 3.58
1996 3199 5.240844 CCCTCCGTTTCTTTTTACTTCACAT 59.759 40.000 0.00 0.00 0.00 3.21
1997 3200 6.428771 CCCTCCGTTTCTTTTTACTTCACATA 59.571 38.462 0.00 0.00 0.00 2.29
1998 3201 7.120726 CCCTCCGTTTCTTTTTACTTCACATAT 59.879 37.037 0.00 0.00 0.00 1.78
1999 3202 9.158233 CCTCCGTTTCTTTTTACTTCACATATA 57.842 33.333 0.00 0.00 0.00 0.86
2014 3217 9.520515 ACTTCACATATAAGATTTGGTCAAAGT 57.479 29.630 2.55 0.00 33.32 2.66
2015 3218 9.994432 CTTCACATATAAGATTTGGTCAAAGTC 57.006 33.333 2.55 1.51 33.32 3.01
2016 3219 9.513906 TTCACATATAAGATTTGGTCAAAGTCA 57.486 29.630 2.55 0.00 33.32 3.41
2017 3220 9.513906 TCACATATAAGATTTGGTCAAAGTCAA 57.486 29.630 2.55 0.00 33.32 3.18
2023 3226 7.639113 AAGATTTGGTCAAAGTCAAAGTACA 57.361 32.000 0.00 0.00 36.49 2.90
2024 3227 7.027778 AGATTTGGTCAAAGTCAAAGTACAC 57.972 36.000 0.00 0.00 36.49 2.90
2025 3228 6.601613 AGATTTGGTCAAAGTCAAAGTACACA 59.398 34.615 0.00 0.00 36.49 3.72
2026 3229 6.576662 TTTGGTCAAAGTCAAAGTACACAA 57.423 33.333 0.00 0.00 0.00 3.33
2027 3230 6.576662 TTGGTCAAAGTCAAAGTACACAAA 57.423 33.333 0.00 0.00 0.00 2.83
2028 3231 6.189677 TGGTCAAAGTCAAAGTACACAAAG 57.810 37.500 0.00 0.00 0.00 2.77
2029 3232 5.708230 TGGTCAAAGTCAAAGTACACAAAGT 59.292 36.000 0.00 0.00 0.00 2.66
2030 3233 6.207810 TGGTCAAAGTCAAAGTACACAAAGTT 59.792 34.615 0.00 0.00 0.00 2.66
2031 3234 7.088272 GGTCAAAGTCAAAGTACACAAAGTTT 58.912 34.615 0.00 0.00 0.00 2.66
2032 3235 7.061789 GGTCAAAGTCAAAGTACACAAAGTTTG 59.938 37.037 14.13 14.13 39.91 2.93
2033 3236 6.584563 TCAAAGTCAAAGTACACAAAGTTTGC 59.415 34.615 15.59 0.00 38.91 3.68
2034 3237 4.993905 AGTCAAAGTACACAAAGTTTGCC 58.006 39.130 15.59 1.75 38.91 4.52
2035 3238 4.461081 AGTCAAAGTACACAAAGTTTGCCA 59.539 37.500 15.59 0.00 38.91 4.92
2036 3239 5.047660 AGTCAAAGTACACAAAGTTTGCCAA 60.048 36.000 15.59 0.00 38.91 4.52
2037 3240 5.635700 GTCAAAGTACACAAAGTTTGCCAAA 59.364 36.000 15.59 0.00 38.91 3.28
2038 3241 6.312672 GTCAAAGTACACAAAGTTTGCCAAAT 59.687 34.615 15.59 0.00 38.91 2.32
2039 3242 6.876257 TCAAAGTACACAAAGTTTGCCAAATT 59.124 30.769 15.59 3.88 38.91 1.82
2040 3243 7.389053 TCAAAGTACACAAAGTTTGCCAAATTT 59.611 29.630 15.59 9.29 38.91 1.82
2041 3244 8.660373 CAAAGTACACAAAGTTTGCCAAATTTA 58.340 29.630 15.59 0.00 34.11 1.40
2042 3245 8.956533 AAGTACACAAAGTTTGCCAAATTTAT 57.043 26.923 15.59 0.00 0.00 1.40
2093 3296 8.860780 ACTAAAACTATATAGTACTCCCTCCG 57.139 38.462 15.74 1.73 34.99 4.63
2094 3297 8.443979 ACTAAAACTATATAGTACTCCCTCCGT 58.556 37.037 15.74 2.26 34.99 4.69
2095 3298 9.294614 CTAAAACTATATAGTACTCCCTCCGTT 57.705 37.037 15.74 0.10 34.99 4.44
2096 3299 7.757941 AAACTATATAGTACTCCCTCCGTTC 57.242 40.000 15.74 0.00 34.99 3.95
2097 3300 5.486526 ACTATATAGTACTCCCTCCGTTCG 58.513 45.833 13.88 0.00 34.13 3.95
2098 3301 1.978454 ATAGTACTCCCTCCGTTCGG 58.022 55.000 0.00 4.74 0.00 4.30
2099 3302 0.911769 TAGTACTCCCTCCGTTCGGA 59.088 55.000 13.34 13.34 0.00 4.55
2100 3303 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
2101 3304 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
2102 3305 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
2103 3306 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
2104 3307 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
2105 3308 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
2106 3309 1.753073 TCCCTCCGTTCGGAATTACTC 59.247 52.381 14.79 0.00 33.41 2.59
2107 3310 1.535437 CCCTCCGTTCGGAATTACTCG 60.535 57.143 14.79 1.97 33.41 4.18
2108 3311 1.133790 CCTCCGTTCGGAATTACTCGT 59.866 52.381 14.79 0.00 33.41 4.18
2109 3312 2.448219 CTCCGTTCGGAATTACTCGTC 58.552 52.381 14.79 0.00 33.41 4.20
2110 3313 2.086869 TCCGTTCGGAATTACTCGTCT 58.913 47.619 11.66 0.00 0.00 4.18
2111 3314 3.270027 TCCGTTCGGAATTACTCGTCTA 58.730 45.455 11.66 0.00 0.00 2.59
2112 3315 3.689161 TCCGTTCGGAATTACTCGTCTAA 59.311 43.478 11.66 0.00 0.00 2.10
2113 3316 4.033684 CCGTTCGGAATTACTCGTCTAAG 58.966 47.826 5.19 0.00 0.00 2.18
2114 3317 4.201851 CCGTTCGGAATTACTCGTCTAAGA 60.202 45.833 5.19 0.00 0.00 2.10
2115 3318 5.327091 CGTTCGGAATTACTCGTCTAAGAA 58.673 41.667 0.00 0.00 0.00 2.52
2116 3319 5.796935 CGTTCGGAATTACTCGTCTAAGAAA 59.203 40.000 0.00 0.00 0.00 2.52
2117 3320 6.471519 CGTTCGGAATTACTCGTCTAAGAAAT 59.528 38.462 0.00 0.00 0.00 2.17
2118 3321 7.513196 CGTTCGGAATTACTCGTCTAAGAAATG 60.513 40.741 0.00 0.00 0.00 2.32
2119 3322 7.092137 TCGGAATTACTCGTCTAAGAAATGA 57.908 36.000 0.00 0.00 0.00 2.57
2120 3323 7.541162 TCGGAATTACTCGTCTAAGAAATGAA 58.459 34.615 0.00 0.00 0.00 2.57
2121 3324 8.195436 TCGGAATTACTCGTCTAAGAAATGAAT 58.805 33.333 0.00 0.00 0.00 2.57
2122 3325 8.269424 CGGAATTACTCGTCTAAGAAATGAATG 58.731 37.037 0.00 0.00 0.00 2.67
2123 3326 9.099454 GGAATTACTCGTCTAAGAAATGAATGT 57.901 33.333 0.00 0.00 0.00 2.71
2164 3367 8.862325 AGTTGTAGATACATCCATTTTTGTGA 57.138 30.769 0.00 0.00 35.89 3.58
2165 3368 8.730680 AGTTGTAGATACATCCATTTTTGTGAC 58.269 33.333 0.00 0.00 35.89 3.67
2166 3369 8.511321 GTTGTAGATACATCCATTTTTGTGACA 58.489 33.333 0.00 0.00 35.89 3.58
2167 3370 8.628630 TGTAGATACATCCATTTTTGTGACAA 57.371 30.769 0.00 0.00 0.00 3.18
2168 3371 8.729756 TGTAGATACATCCATTTTTGTGACAAG 58.270 33.333 0.00 0.00 0.00 3.16
2169 3372 7.765695 AGATACATCCATTTTTGTGACAAGT 57.234 32.000 0.00 0.00 0.00 3.16
2170 3373 8.862325 AGATACATCCATTTTTGTGACAAGTA 57.138 30.769 0.00 0.00 0.00 2.24
2171 3374 9.295825 AGATACATCCATTTTTGTGACAAGTAA 57.704 29.630 0.00 0.00 0.00 2.24
2174 3377 8.816640 ACATCCATTTTTGTGACAAGTAATTC 57.183 30.769 0.00 0.00 0.00 2.17
2175 3378 7.872483 ACATCCATTTTTGTGACAAGTAATTCC 59.128 33.333 0.00 0.00 0.00 3.01
2176 3379 6.442952 TCCATTTTTGTGACAAGTAATTCCG 58.557 36.000 0.00 0.00 0.00 4.30
2177 3380 6.263392 TCCATTTTTGTGACAAGTAATTCCGA 59.737 34.615 0.00 0.00 0.00 4.55
2178 3381 6.920758 CCATTTTTGTGACAAGTAATTCCGAA 59.079 34.615 0.00 0.00 0.00 4.30
2179 3382 7.096230 CCATTTTTGTGACAAGTAATTCCGAAC 60.096 37.037 0.00 0.00 0.00 3.95
2180 3383 4.718858 TTGTGACAAGTAATTCCGAACG 57.281 40.909 0.00 0.00 0.00 3.95
2181 3384 3.061322 TGTGACAAGTAATTCCGAACGG 58.939 45.455 6.94 6.94 0.00 4.44
2182 3385 3.243805 TGTGACAAGTAATTCCGAACGGA 60.244 43.478 12.04 12.04 43.52 4.69
2183 3386 3.367025 GTGACAAGTAATTCCGAACGGAG 59.633 47.826 15.34 5.60 46.06 4.63
2184 3387 3.256383 TGACAAGTAATTCCGAACGGAGA 59.744 43.478 15.34 8.02 46.06 3.71
2185 3388 3.846360 ACAAGTAATTCCGAACGGAGAG 58.154 45.455 15.34 5.41 46.06 3.20
2186 3389 3.508793 ACAAGTAATTCCGAACGGAGAGA 59.491 43.478 15.34 2.49 46.06 3.10
2187 3390 4.106197 CAAGTAATTCCGAACGGAGAGAG 58.894 47.826 15.34 1.49 46.06 3.20
2188 3391 3.354467 AGTAATTCCGAACGGAGAGAGT 58.646 45.455 15.34 4.12 46.06 3.24
2189 3392 4.521146 AGTAATTCCGAACGGAGAGAGTA 58.479 43.478 15.34 3.20 46.06 2.59
2190 3393 5.131784 AGTAATTCCGAACGGAGAGAGTAT 58.868 41.667 15.34 3.38 46.06 2.12
2191 3394 3.992260 ATTCCGAACGGAGAGAGTATG 57.008 47.619 15.34 0.00 46.06 2.39
2192 3395 2.704464 TCCGAACGGAGAGAGTATGA 57.296 50.000 12.04 0.00 39.76 2.15
2193 3396 2.995283 TCCGAACGGAGAGAGTATGAA 58.005 47.619 12.04 0.00 39.76 2.57
2194 3397 3.349927 TCCGAACGGAGAGAGTATGAAA 58.650 45.455 12.04 0.00 39.76 2.69
2195 3398 3.760151 TCCGAACGGAGAGAGTATGAAAA 59.240 43.478 12.04 0.00 39.76 2.29
2196 3399 4.401519 TCCGAACGGAGAGAGTATGAAAAT 59.598 41.667 12.04 0.00 39.76 1.82
2197 3400 5.591472 TCCGAACGGAGAGAGTATGAAAATA 59.409 40.000 12.04 0.00 39.76 1.40
2198 3401 5.686397 CCGAACGGAGAGAGTATGAAAATAC 59.314 44.000 7.53 0.00 37.50 1.89
2199 3402 5.395778 CGAACGGAGAGAGTATGAAAATACG 59.604 44.000 0.00 0.00 32.52 3.06
2200 3403 5.831702 ACGGAGAGAGTATGAAAATACGT 57.168 39.130 0.00 0.00 32.52 3.57
2201 3404 6.205101 ACGGAGAGAGTATGAAAATACGTT 57.795 37.500 0.00 0.00 32.52 3.99
2202 3405 6.628185 ACGGAGAGAGTATGAAAATACGTTT 58.372 36.000 0.00 0.00 32.52 3.60
2203 3406 6.750963 ACGGAGAGAGTATGAAAATACGTTTC 59.249 38.462 0.00 0.00 45.13 2.78
2213 3416 5.932021 GAAAATACGTTTCATGGTGCATC 57.068 39.130 0.00 0.00 44.42 3.91
2214 3417 5.640732 GAAAATACGTTTCATGGTGCATCT 58.359 37.500 0.00 0.00 44.42 2.90
2215 3418 4.621068 AATACGTTTCATGGTGCATCTG 57.379 40.909 0.00 0.00 0.00 2.90
2216 3419 2.183478 ACGTTTCATGGTGCATCTGA 57.817 45.000 0.00 0.00 0.00 3.27
2217 3420 2.715046 ACGTTTCATGGTGCATCTGAT 58.285 42.857 0.00 0.00 0.00 2.90
2218 3421 3.872696 ACGTTTCATGGTGCATCTGATA 58.127 40.909 0.00 0.00 0.00 2.15
2219 3422 4.260985 ACGTTTCATGGTGCATCTGATAA 58.739 39.130 0.00 0.00 0.00 1.75
2220 3423 4.883585 ACGTTTCATGGTGCATCTGATAAT 59.116 37.500 0.00 0.00 0.00 1.28
2221 3424 6.054941 ACGTTTCATGGTGCATCTGATAATA 58.945 36.000 0.00 0.00 0.00 0.98
2222 3425 6.712095 ACGTTTCATGGTGCATCTGATAATAT 59.288 34.615 0.00 0.00 0.00 1.28
2223 3426 7.229306 ACGTTTCATGGTGCATCTGATAATATT 59.771 33.333 0.00 0.00 0.00 1.28
2224 3427 7.536281 CGTTTCATGGTGCATCTGATAATATTG 59.464 37.037 0.00 0.00 0.00 1.90
2225 3428 8.570488 GTTTCATGGTGCATCTGATAATATTGA 58.430 33.333 0.00 0.00 0.00 2.57
2226 3429 8.873186 TTCATGGTGCATCTGATAATATTGAT 57.127 30.769 0.00 0.00 0.00 2.57
2227 3430 8.873186 TCATGGTGCATCTGATAATATTGATT 57.127 30.769 0.00 0.00 0.00 2.57
2228 3431 9.304335 TCATGGTGCATCTGATAATATTGATTT 57.696 29.630 0.00 0.00 0.00 2.17
2229 3432 9.569167 CATGGTGCATCTGATAATATTGATTTC 57.431 33.333 0.00 0.00 0.00 2.17
2230 3433 8.694581 TGGTGCATCTGATAATATTGATTTCA 57.305 30.769 0.00 0.00 0.00 2.69
2231 3434 9.304335 TGGTGCATCTGATAATATTGATTTCAT 57.696 29.630 0.00 0.00 0.00 2.57
2285 3488 7.484035 AGTTAGTCAAACTCTACAAAGCTTG 57.516 36.000 0.00 0.00 45.64 4.01
2286 3489 7.272978 AGTTAGTCAAACTCTACAAAGCTTGA 58.727 34.615 0.00 0.00 45.64 3.02
2287 3490 5.993106 AGTCAAACTCTACAAAGCTTGAC 57.007 39.130 0.00 10.63 0.00 3.18
2288 3491 5.675538 AGTCAAACTCTACAAAGCTTGACT 58.324 37.500 13.94 13.94 0.00 3.41
2289 3492 6.116126 AGTCAAACTCTACAAAGCTTGACTT 58.884 36.000 13.94 3.16 41.70 3.01
2299 3502 3.801114 AAGCTTGACTTTGACCAAACC 57.199 42.857 0.00 0.00 33.71 3.27
2300 3503 3.018423 AGCTTGACTTTGACCAAACCT 57.982 42.857 0.00 0.00 0.00 3.50
2301 3504 3.365472 AGCTTGACTTTGACCAAACCTT 58.635 40.909 0.00 0.00 0.00 3.50
2302 3505 4.532834 AGCTTGACTTTGACCAAACCTTA 58.467 39.130 0.00 0.00 0.00 2.69
2303 3506 5.140454 AGCTTGACTTTGACCAAACCTTAT 58.860 37.500 0.00 0.00 0.00 1.73
2304 3507 6.303839 AGCTTGACTTTGACCAAACCTTATA 58.696 36.000 0.00 0.00 0.00 0.98
2305 3508 6.948309 AGCTTGACTTTGACCAAACCTTATAT 59.052 34.615 0.00 0.00 0.00 0.86
2306 3509 7.029563 GCTTGACTTTGACCAAACCTTATATG 58.970 38.462 0.00 0.00 0.00 1.78
2307 3510 6.509418 TGACTTTGACCAAACCTTATATGC 57.491 37.500 0.00 0.00 0.00 3.14
2308 3511 6.007076 TGACTTTGACCAAACCTTATATGCA 58.993 36.000 0.00 0.00 0.00 3.96
2309 3512 6.150976 TGACTTTGACCAAACCTTATATGCAG 59.849 38.462 0.00 0.00 0.00 4.41
2310 3513 6.245408 ACTTTGACCAAACCTTATATGCAGA 58.755 36.000 0.00 0.00 0.00 4.26
2311 3514 6.151144 ACTTTGACCAAACCTTATATGCAGAC 59.849 38.462 0.00 0.00 0.00 3.51
2312 3515 5.435686 TGACCAAACCTTATATGCAGACT 57.564 39.130 0.00 0.00 0.00 3.24
2313 3516 6.553953 TGACCAAACCTTATATGCAGACTA 57.446 37.500 0.00 0.00 0.00 2.59
2314 3517 6.953101 TGACCAAACCTTATATGCAGACTAA 58.047 36.000 0.00 0.00 0.00 2.24
2315 3518 7.398829 TGACCAAACCTTATATGCAGACTAAA 58.601 34.615 0.00 0.00 0.00 1.85
2316 3519 7.885922 TGACCAAACCTTATATGCAGACTAAAA 59.114 33.333 0.00 0.00 0.00 1.52
2317 3520 8.644374 ACCAAACCTTATATGCAGACTAAAAA 57.356 30.769 0.00 0.00 0.00 1.94
2318 3521 8.739972 ACCAAACCTTATATGCAGACTAAAAAG 58.260 33.333 0.00 0.00 0.00 2.27
2319 3522 8.956426 CCAAACCTTATATGCAGACTAAAAAGA 58.044 33.333 0.00 0.00 0.00 2.52
2323 3526 8.665685 ACCTTATATGCAGACTAAAAAGAAACG 58.334 33.333 0.00 0.00 0.00 3.60
2324 3527 8.122952 CCTTATATGCAGACTAAAAAGAAACGG 58.877 37.037 0.00 0.00 0.00 4.44
2325 3528 8.780846 TTATATGCAGACTAAAAAGAAACGGA 57.219 30.769 0.00 0.00 0.00 4.69
2326 3529 5.613358 ATGCAGACTAAAAAGAAACGGAG 57.387 39.130 0.00 0.00 0.00 4.63
2327 3530 3.813166 TGCAGACTAAAAAGAAACGGAGG 59.187 43.478 0.00 0.00 0.00 4.30
2328 3531 4.062991 GCAGACTAAAAAGAAACGGAGGA 58.937 43.478 0.00 0.00 0.00 3.71
2329 3532 4.514066 GCAGACTAAAAAGAAACGGAGGAA 59.486 41.667 0.00 0.00 0.00 3.36
2330 3533 5.334182 GCAGACTAAAAAGAAACGGAGGAAG 60.334 44.000 0.00 0.00 0.00 3.46
2331 3534 5.758784 CAGACTAAAAAGAAACGGAGGAAGT 59.241 40.000 0.00 0.00 0.00 3.01
2332 3535 6.927381 CAGACTAAAAAGAAACGGAGGAAGTA 59.073 38.462 0.00 0.00 0.00 2.24
2333 3536 7.603024 CAGACTAAAAAGAAACGGAGGAAGTAT 59.397 37.037 0.00 0.00 0.00 2.12
2361 3564 9.738832 GTCTAGGAACATTTACTAGATCTTCAC 57.261 37.037 10.43 0.00 43.42 3.18
2409 3612 0.391597 GGAAATATCCTCGCGGACCA 59.608 55.000 6.13 0.00 43.51 4.02
2421 3624 3.721868 GGACCAGATCCGTTCCCA 58.278 61.111 0.00 0.00 37.88 4.37
2422 3625 1.988015 GGACCAGATCCGTTCCCAA 59.012 57.895 0.00 0.00 37.88 4.12
2423 3626 0.392595 GGACCAGATCCGTTCCCAAC 60.393 60.000 0.00 0.00 37.88 3.77
2424 3627 0.392595 GACCAGATCCGTTCCCAACC 60.393 60.000 0.00 0.00 0.00 3.77
2425 3628 0.840722 ACCAGATCCGTTCCCAACCT 60.841 55.000 0.00 0.00 0.00 3.50
2426 3629 0.107654 CCAGATCCGTTCCCAACCTC 60.108 60.000 0.00 0.00 0.00 3.85
2438 3641 1.688311 CCCAACCTCCTCCGATAGTGA 60.688 57.143 0.00 0.00 0.00 3.41
2439 3642 2.320781 CCAACCTCCTCCGATAGTGAT 58.679 52.381 0.00 0.00 0.00 3.06
2440 3643 2.700897 CCAACCTCCTCCGATAGTGATT 59.299 50.000 0.00 0.00 0.00 2.57
2542 3745 8.511604 AAAAACCACTCAGATGTATCCTAATG 57.488 34.615 0.00 0.00 0.00 1.90
2543 3746 5.815233 ACCACTCAGATGTATCCTAATGG 57.185 43.478 0.00 0.00 0.00 3.16
2544 3747 4.594920 ACCACTCAGATGTATCCTAATGGG 59.405 45.833 0.00 0.00 0.00 4.00
2545 3748 4.594920 CCACTCAGATGTATCCTAATGGGT 59.405 45.833 0.00 0.00 36.25 4.51
2546 3749 5.512060 CCACTCAGATGTATCCTAATGGGTG 60.512 48.000 5.37 5.37 38.56 4.61
2547 3750 5.305386 CACTCAGATGTATCCTAATGGGTGA 59.695 44.000 6.16 0.00 40.74 4.02
2548 3751 6.013898 CACTCAGATGTATCCTAATGGGTGAT 60.014 42.308 6.16 0.00 40.74 3.06
2549 3752 7.179160 CACTCAGATGTATCCTAATGGGTGATA 59.821 40.741 6.16 0.00 40.74 2.15
2550 3753 7.179338 ACTCAGATGTATCCTAATGGGTGATAC 59.821 40.741 0.00 0.00 40.66 2.24
2557 3760 8.602424 TGTATCCTAATGGGTGATACAAATAGG 58.398 37.037 8.64 0.00 44.61 2.57
2558 3761 6.448369 TCCTAATGGGTGATACAAATAGGG 57.552 41.667 0.00 0.00 34.65 3.53
2559 3762 5.914716 TCCTAATGGGTGATACAAATAGGGT 59.085 40.000 0.00 0.00 34.65 4.34
2560 3763 7.083628 TCCTAATGGGTGATACAAATAGGGTA 58.916 38.462 0.00 0.00 34.65 3.69
2561 3764 7.573238 TCCTAATGGGTGATACAAATAGGGTAA 59.427 37.037 0.00 0.00 34.65 2.85
2562 3765 7.883311 CCTAATGGGTGATACAAATAGGGTAAG 59.117 40.741 0.00 0.00 32.31 2.34
2563 3766 7.460214 AATGGGTGATACAAATAGGGTAAGA 57.540 36.000 0.00 0.00 0.00 2.10
2564 3767 6.894735 TGGGTGATACAAATAGGGTAAGAA 57.105 37.500 0.00 0.00 0.00 2.52
2565 3768 6.895782 TGGGTGATACAAATAGGGTAAGAAG 58.104 40.000 0.00 0.00 0.00 2.85
2566 3769 6.674861 TGGGTGATACAAATAGGGTAAGAAGA 59.325 38.462 0.00 0.00 0.00 2.87
2567 3770 7.183112 TGGGTGATACAAATAGGGTAAGAAGAA 59.817 37.037 0.00 0.00 0.00 2.52
2568 3771 8.218488 GGGTGATACAAATAGGGTAAGAAGAAT 58.782 37.037 0.00 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.310251 GTGACCGTACGATCGCGC 61.310 66.667 18.76 7.25 42.48 6.86
83 84 8.388103 CGGACTTCATATAAACAAGACGAAAAT 58.612 33.333 0.00 0.00 0.00 1.82
127 128 1.748950 TTATGCAGCAAGCCGAATGA 58.251 45.000 0.00 0.00 44.83 2.57
131 132 1.462616 ACATTTATGCAGCAAGCCGA 58.537 45.000 0.00 0.00 44.83 5.54
135 136 7.124347 ACATTTCAAACATTTATGCAGCAAG 57.876 32.000 0.00 0.00 0.00 4.01
139 140 7.331792 CGCATACATTTCAAACATTTATGCAG 58.668 34.615 10.37 1.57 40.10 4.41
505 506 2.551270 AGGCAAGTAAGGACATCTCCA 58.449 47.619 0.00 0.00 39.39 3.86
506 507 3.636153 AAGGCAAGTAAGGACATCTCC 57.364 47.619 0.00 0.00 36.71 3.71
507 508 5.354513 GGTTAAAGGCAAGTAAGGACATCTC 59.645 44.000 0.00 0.00 0.00 2.75
582 583 3.270027 CGTTCCTAGCATGATGACCAAA 58.730 45.455 0.00 0.00 0.00 3.28
590 591 0.032515 TCCCTCCGTTCCTAGCATGA 60.033 55.000 0.00 0.00 0.00 3.07
624 625 4.687948 ACGTAGATGCATGCAGCTAAATAG 59.312 41.667 38.93 30.53 44.89 1.73
625 626 4.631131 ACGTAGATGCATGCAGCTAAATA 58.369 39.130 38.93 22.52 44.89 1.40
629 630 3.367395 GGATACGTAGATGCATGCAGCTA 60.367 47.826 35.27 35.27 41.23 3.32
630 631 2.611473 GGATACGTAGATGCATGCAGCT 60.611 50.000 37.43 37.43 45.29 4.24
975 982 3.366374 GCCATAGTGCAAGTTTTCAGACC 60.366 47.826 0.00 0.00 0.00 3.85
1016 1023 0.685097 TGCAGGACTTCTACACCACC 59.315 55.000 0.00 0.00 0.00 4.61
1023 1030 7.041721 CAGTATGTGTTTATGCAGGACTTCTA 58.958 38.462 0.00 0.00 0.00 2.10
1047 1054 7.279750 TGTTCTATGTTGTGTAGTACTGTCA 57.720 36.000 5.39 1.95 0.00 3.58
1665 1896 5.789643 ACACATCAAAGGCAAATACACTT 57.210 34.783 0.00 0.00 0.00 3.16
1797 2997 2.418368 TGCCTTCGCATATTGGAAGT 57.582 45.000 10.21 0.00 41.12 3.01
1886 3086 5.010282 GTCAAGATCTGGTGTACCCATTTT 58.990 41.667 0.00 0.00 44.15 1.82
1963 3166 9.002600 GTAAAAAGAAACGGAGGGAGTAATAAA 57.997 33.333 0.00 0.00 0.00 1.40
1972 3175 4.577283 TGTGAAGTAAAAAGAAACGGAGGG 59.423 41.667 0.00 0.00 0.00 4.30
1973 3176 5.744666 TGTGAAGTAAAAAGAAACGGAGG 57.255 39.130 0.00 0.00 0.00 4.30
1988 3191 9.520515 ACTTTGACCAAATCTTATATGTGAAGT 57.479 29.630 0.00 0.00 0.00 3.01
1989 3192 9.994432 GACTTTGACCAAATCTTATATGTGAAG 57.006 33.333 0.00 0.00 0.00 3.02
1990 3193 9.513906 TGACTTTGACCAAATCTTATATGTGAA 57.486 29.630 0.00 0.00 0.00 3.18
1991 3194 9.513906 TTGACTTTGACCAAATCTTATATGTGA 57.486 29.630 0.00 0.00 0.00 3.58
1997 3200 9.349713 TGTACTTTGACTTTGACCAAATCTTAT 57.650 29.630 0.00 0.00 32.60 1.73
1998 3201 8.617809 GTGTACTTTGACTTTGACCAAATCTTA 58.382 33.333 0.00 0.00 32.60 2.10
1999 3202 7.122055 TGTGTACTTTGACTTTGACCAAATCTT 59.878 33.333 0.00 0.00 32.60 2.40
2000 3203 6.601613 TGTGTACTTTGACTTTGACCAAATCT 59.398 34.615 0.00 0.00 32.60 2.40
2001 3204 6.791303 TGTGTACTTTGACTTTGACCAAATC 58.209 36.000 0.00 0.00 32.60 2.17
2002 3205 6.767524 TGTGTACTTTGACTTTGACCAAAT 57.232 33.333 0.00 0.00 32.60 2.32
2003 3206 6.576662 TTGTGTACTTTGACTTTGACCAAA 57.423 33.333 0.00 0.00 0.00 3.28
2004 3207 6.207810 ACTTTGTGTACTTTGACTTTGACCAA 59.792 34.615 0.00 0.00 0.00 3.67
2005 3208 5.708230 ACTTTGTGTACTTTGACTTTGACCA 59.292 36.000 0.00 0.00 0.00 4.02
2006 3209 6.190954 ACTTTGTGTACTTTGACTTTGACC 57.809 37.500 0.00 0.00 0.00 4.02
2007 3210 7.410407 GCAAACTTTGTGTACTTTGACTTTGAC 60.410 37.037 7.08 0.00 0.00 3.18
2008 3211 6.584563 GCAAACTTTGTGTACTTTGACTTTGA 59.415 34.615 7.08 0.00 0.00 2.69
2009 3212 6.183360 GGCAAACTTTGTGTACTTTGACTTTG 60.183 38.462 7.08 4.10 0.00 2.77
2010 3213 5.867174 GGCAAACTTTGTGTACTTTGACTTT 59.133 36.000 7.08 0.00 0.00 2.66
2011 3214 5.047660 TGGCAAACTTTGTGTACTTTGACTT 60.048 36.000 9.48 0.00 0.00 3.01
2012 3215 4.461081 TGGCAAACTTTGTGTACTTTGACT 59.539 37.500 9.48 0.00 0.00 3.41
2013 3216 4.739195 TGGCAAACTTTGTGTACTTTGAC 58.261 39.130 7.08 4.93 0.00 3.18
2014 3217 5.392767 TTGGCAAACTTTGTGTACTTTGA 57.607 34.783 0.00 0.00 0.00 2.69
2015 3218 6.660887 ATTTGGCAAACTTTGTGTACTTTG 57.339 33.333 16.00 0.00 0.00 2.77
2016 3219 7.680442 AAATTTGGCAAACTTTGTGTACTTT 57.320 28.000 16.00 5.01 0.00 2.66
2017 3220 8.956533 ATAAATTTGGCAAACTTTGTGTACTT 57.043 26.923 16.00 0.00 0.00 2.24
2067 3270 9.950496 CGGAGGGAGTACTATATAGTTTTAGTA 57.050 37.037 20.21 0.00 37.73 1.82
2068 3271 8.443979 ACGGAGGGAGTACTATATAGTTTTAGT 58.556 37.037 20.21 5.99 37.73 2.24
2069 3272 8.860780 ACGGAGGGAGTACTATATAGTTTTAG 57.139 38.462 20.21 6.07 37.73 1.85
2070 3273 9.289782 GAACGGAGGGAGTACTATATAGTTTTA 57.710 37.037 20.21 0.12 37.73 1.52
2071 3274 7.040823 CGAACGGAGGGAGTACTATATAGTTTT 60.041 40.741 20.21 9.28 37.73 2.43
2072 3275 6.429385 CGAACGGAGGGAGTACTATATAGTTT 59.571 42.308 20.21 9.62 37.73 2.66
2073 3276 5.936956 CGAACGGAGGGAGTACTATATAGTT 59.063 44.000 20.21 3.71 37.73 2.24
2074 3277 5.486526 CGAACGGAGGGAGTACTATATAGT 58.513 45.833 19.07 19.07 40.24 2.12
2075 3278 4.874966 CCGAACGGAGGGAGTACTATATAG 59.125 50.000 7.53 8.27 37.50 1.31
2076 3279 4.532126 TCCGAACGGAGGGAGTACTATATA 59.468 45.833 12.04 0.00 39.76 0.86
2077 3280 3.328931 TCCGAACGGAGGGAGTACTATAT 59.671 47.826 12.04 0.00 39.76 0.86
2078 3281 2.705658 TCCGAACGGAGGGAGTACTATA 59.294 50.000 12.04 0.00 39.76 1.31
2079 3282 1.492176 TCCGAACGGAGGGAGTACTAT 59.508 52.381 12.04 0.00 39.76 2.12
2080 3283 0.911769 TCCGAACGGAGGGAGTACTA 59.088 55.000 12.04 0.00 39.76 1.82
2081 3284 0.038744 TTCCGAACGGAGGGAGTACT 59.961 55.000 15.34 0.00 46.06 2.73
2082 3285 1.109609 ATTCCGAACGGAGGGAGTAC 58.890 55.000 15.34 0.00 46.06 2.73
2083 3286 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
2084 3287 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
2085 3288 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
2086 3289 1.753073 GAGTAATTCCGAACGGAGGGA 59.247 52.381 15.34 2.49 46.06 4.20
2087 3290 1.535437 CGAGTAATTCCGAACGGAGGG 60.535 57.143 15.34 0.00 46.06 4.30
2088 3291 1.133790 ACGAGTAATTCCGAACGGAGG 59.866 52.381 15.34 4.28 46.06 4.30
2089 3292 2.097142 AGACGAGTAATTCCGAACGGAG 59.903 50.000 15.34 5.60 46.06 4.63
2090 3293 2.086869 AGACGAGTAATTCCGAACGGA 58.913 47.619 12.04 12.04 43.52 4.69
2091 3294 2.556534 AGACGAGTAATTCCGAACGG 57.443 50.000 6.94 6.94 0.00 4.44
2092 3295 4.901814 TCTTAGACGAGTAATTCCGAACG 58.098 43.478 0.00 0.00 0.00 3.95
2093 3296 7.487189 TCATTTCTTAGACGAGTAATTCCGAAC 59.513 37.037 0.00 0.00 0.00 3.95
2094 3297 7.541162 TCATTTCTTAGACGAGTAATTCCGAA 58.459 34.615 0.00 0.00 0.00 4.30
2095 3298 7.092137 TCATTTCTTAGACGAGTAATTCCGA 57.908 36.000 0.00 0.00 0.00 4.55
2096 3299 7.751047 TTCATTTCTTAGACGAGTAATTCCG 57.249 36.000 0.00 0.00 0.00 4.30
2097 3300 9.099454 ACATTCATTTCTTAGACGAGTAATTCC 57.901 33.333 0.00 0.00 0.00 3.01
2138 3341 9.952030 TCACAAAAATGGATGTATCTACAACTA 57.048 29.630 0.00 0.00 39.99 2.24
2139 3342 8.730680 GTCACAAAAATGGATGTATCTACAACT 58.269 33.333 0.00 0.00 39.99 3.16
2140 3343 8.511321 TGTCACAAAAATGGATGTATCTACAAC 58.489 33.333 0.00 0.00 39.99 3.32
2141 3344 8.628630 TGTCACAAAAATGGATGTATCTACAA 57.371 30.769 0.00 0.00 39.99 2.41
2142 3345 8.628630 TTGTCACAAAAATGGATGTATCTACA 57.371 30.769 0.00 0.00 40.98 2.74
2143 3346 8.730680 ACTTGTCACAAAAATGGATGTATCTAC 58.269 33.333 0.00 0.00 0.00 2.59
2144 3347 8.862325 ACTTGTCACAAAAATGGATGTATCTA 57.138 30.769 0.00 0.00 0.00 1.98
2145 3348 7.765695 ACTTGTCACAAAAATGGATGTATCT 57.234 32.000 0.00 0.00 0.00 1.98
2148 3351 9.906660 GAATTACTTGTCACAAAAATGGATGTA 57.093 29.630 0.00 0.00 0.00 2.29
2149 3352 7.872483 GGAATTACTTGTCACAAAAATGGATGT 59.128 33.333 0.00 0.00 0.00 3.06
2150 3353 7.062138 CGGAATTACTTGTCACAAAAATGGATG 59.938 37.037 0.00 0.00 0.00 3.51
2151 3354 7.040062 TCGGAATTACTTGTCACAAAAATGGAT 60.040 33.333 0.00 0.00 0.00 3.41
2152 3355 6.263392 TCGGAATTACTTGTCACAAAAATGGA 59.737 34.615 0.00 0.00 0.00 3.41
2153 3356 6.442952 TCGGAATTACTTGTCACAAAAATGG 58.557 36.000 0.00 0.00 0.00 3.16
2154 3357 7.357206 CGTTCGGAATTACTTGTCACAAAAATG 60.357 37.037 0.00 0.00 0.00 2.32
2155 3358 6.635239 CGTTCGGAATTACTTGTCACAAAAAT 59.365 34.615 0.00 0.00 0.00 1.82
2156 3359 5.966503 CGTTCGGAATTACTTGTCACAAAAA 59.033 36.000 0.00 0.00 0.00 1.94
2157 3360 5.503498 CGTTCGGAATTACTTGTCACAAAA 58.497 37.500 0.00 0.00 0.00 2.44
2158 3361 4.024725 CCGTTCGGAATTACTTGTCACAAA 60.025 41.667 5.19 0.00 0.00 2.83
2159 3362 3.495377 CCGTTCGGAATTACTTGTCACAA 59.505 43.478 5.19 0.00 0.00 3.33
2160 3363 3.061322 CCGTTCGGAATTACTTGTCACA 58.939 45.455 5.19 0.00 0.00 3.58
2161 3364 3.319755 TCCGTTCGGAATTACTTGTCAC 58.680 45.455 11.66 0.00 0.00 3.67
2162 3365 3.256383 TCTCCGTTCGGAATTACTTGTCA 59.744 43.478 14.79 0.00 33.41 3.58
2163 3366 3.841643 TCTCCGTTCGGAATTACTTGTC 58.158 45.455 14.79 0.00 33.41 3.18
2164 3367 3.508793 TCTCTCCGTTCGGAATTACTTGT 59.491 43.478 14.79 0.00 33.41 3.16
2165 3368 4.106029 TCTCTCCGTTCGGAATTACTTG 57.894 45.455 14.79 2.23 33.41 3.16
2166 3369 3.762823 ACTCTCTCCGTTCGGAATTACTT 59.237 43.478 14.79 0.00 33.41 2.24
2167 3370 3.354467 ACTCTCTCCGTTCGGAATTACT 58.646 45.455 14.79 0.00 33.41 2.24
2168 3371 3.779271 ACTCTCTCCGTTCGGAATTAC 57.221 47.619 14.79 0.00 33.41 1.89
2169 3372 5.128205 TCATACTCTCTCCGTTCGGAATTA 58.872 41.667 14.79 3.46 33.41 1.40
2170 3373 3.952323 TCATACTCTCTCCGTTCGGAATT 59.048 43.478 14.79 0.00 33.41 2.17
2171 3374 3.552875 TCATACTCTCTCCGTTCGGAAT 58.447 45.455 14.79 2.14 33.41 3.01
2172 3375 2.995283 TCATACTCTCTCCGTTCGGAA 58.005 47.619 14.79 5.84 33.41 4.30
2173 3376 2.704464 TCATACTCTCTCCGTTCGGA 57.296 50.000 13.34 13.34 0.00 4.55
2174 3377 3.777465 TTTCATACTCTCTCCGTTCGG 57.223 47.619 4.74 4.74 0.00 4.30
2175 3378 5.395778 CGTATTTTCATACTCTCTCCGTTCG 59.604 44.000 0.00 0.00 34.10 3.95
2176 3379 6.264088 ACGTATTTTCATACTCTCTCCGTTC 58.736 40.000 0.00 0.00 34.10 3.95
2177 3380 6.205101 ACGTATTTTCATACTCTCTCCGTT 57.795 37.500 0.00 0.00 34.10 4.44
2178 3381 5.831702 ACGTATTTTCATACTCTCTCCGT 57.168 39.130 0.00 0.00 34.10 4.69
2179 3382 7.151103 GAAACGTATTTTCATACTCTCTCCG 57.849 40.000 0.00 0.00 42.95 4.63
2191 3394 5.512788 CAGATGCACCATGAAACGTATTTTC 59.487 40.000 0.00 0.00 43.63 2.29
2192 3395 5.182950 TCAGATGCACCATGAAACGTATTTT 59.817 36.000 0.00 0.00 0.00 1.82
2193 3396 4.699735 TCAGATGCACCATGAAACGTATTT 59.300 37.500 0.00 0.00 0.00 1.40
2194 3397 4.260985 TCAGATGCACCATGAAACGTATT 58.739 39.130 0.00 0.00 0.00 1.89
2195 3398 3.872696 TCAGATGCACCATGAAACGTAT 58.127 40.909 0.00 0.00 0.00 3.06
2196 3399 3.326836 TCAGATGCACCATGAAACGTA 57.673 42.857 0.00 0.00 0.00 3.57
2197 3400 2.183478 TCAGATGCACCATGAAACGT 57.817 45.000 0.00 0.00 0.00 3.99
2198 3401 4.880886 TTATCAGATGCACCATGAAACG 57.119 40.909 0.00 0.00 0.00 3.60
2199 3402 8.570488 TCAATATTATCAGATGCACCATGAAAC 58.430 33.333 0.00 0.00 0.00 2.78
2200 3403 8.694581 TCAATATTATCAGATGCACCATGAAA 57.305 30.769 0.00 0.00 0.00 2.69
2201 3404 8.873186 ATCAATATTATCAGATGCACCATGAA 57.127 30.769 0.00 0.00 0.00 2.57
2202 3405 8.873186 AATCAATATTATCAGATGCACCATGA 57.127 30.769 0.00 0.00 0.00 3.07
2203 3406 9.569167 GAAATCAATATTATCAGATGCACCATG 57.431 33.333 0.00 0.00 0.00 3.66
2204 3407 9.304335 TGAAATCAATATTATCAGATGCACCAT 57.696 29.630 0.00 0.00 0.00 3.55
2205 3408 8.694581 TGAAATCAATATTATCAGATGCACCA 57.305 30.769 0.00 0.00 0.00 4.17
2257 3460 9.780186 AGCTTTGTAGAGTTTGACTAACTTTAT 57.220 29.630 3.78 0.00 47.00 1.40
2258 3461 9.609346 AAGCTTTGTAGAGTTTGACTAACTTTA 57.391 29.630 3.78 0.37 47.00 1.85
2259 3462 8.398665 CAAGCTTTGTAGAGTTTGACTAACTTT 58.601 33.333 0.00 1.31 47.00 2.66
2260 3463 7.769044 TCAAGCTTTGTAGAGTTTGACTAACTT 59.231 33.333 0.00 0.00 47.00 2.66
2262 3465 7.478520 TCAAGCTTTGTAGAGTTTGACTAAC 57.521 36.000 0.00 0.00 40.46 2.34
2279 3482 3.365472 AGGTTTGGTCAAAGTCAAGCTT 58.635 40.909 0.00 0.00 39.52 3.74
2280 3483 3.018423 AGGTTTGGTCAAAGTCAAGCT 57.982 42.857 0.00 0.00 0.00 3.74
2281 3484 3.801114 AAGGTTTGGTCAAAGTCAAGC 57.199 42.857 0.00 0.00 0.00 4.01
2282 3485 7.029563 GCATATAAGGTTTGGTCAAAGTCAAG 58.970 38.462 0.00 0.00 0.00 3.02
2283 3486 6.491745 TGCATATAAGGTTTGGTCAAAGTCAA 59.508 34.615 0.00 0.00 0.00 3.18
2284 3487 6.007076 TGCATATAAGGTTTGGTCAAAGTCA 58.993 36.000 0.00 0.00 0.00 3.41
2285 3488 6.374333 TCTGCATATAAGGTTTGGTCAAAGTC 59.626 38.462 0.00 0.00 0.00 3.01
2286 3489 6.151144 GTCTGCATATAAGGTTTGGTCAAAGT 59.849 38.462 0.00 0.00 0.00 2.66
2287 3490 6.375455 AGTCTGCATATAAGGTTTGGTCAAAG 59.625 38.462 0.00 0.00 0.00 2.77
2288 3491 6.245408 AGTCTGCATATAAGGTTTGGTCAAA 58.755 36.000 0.00 0.00 0.00 2.69
2289 3492 5.815581 AGTCTGCATATAAGGTTTGGTCAA 58.184 37.500 0.00 0.00 0.00 3.18
2290 3493 5.435686 AGTCTGCATATAAGGTTTGGTCA 57.564 39.130 0.00 0.00 0.00 4.02
2291 3494 7.859325 TTTAGTCTGCATATAAGGTTTGGTC 57.141 36.000 0.00 0.00 0.00 4.02
2292 3495 8.644374 TTTTTAGTCTGCATATAAGGTTTGGT 57.356 30.769 0.00 0.00 0.00 3.67
2293 3496 8.956426 TCTTTTTAGTCTGCATATAAGGTTTGG 58.044 33.333 0.00 0.00 0.00 3.28
2297 3500 8.665685 CGTTTCTTTTTAGTCTGCATATAAGGT 58.334 33.333 0.00 0.00 0.00 3.50
2298 3501 8.122952 CCGTTTCTTTTTAGTCTGCATATAAGG 58.877 37.037 0.00 0.00 0.00 2.69
2299 3502 8.879759 TCCGTTTCTTTTTAGTCTGCATATAAG 58.120 33.333 0.00 0.00 0.00 1.73
2300 3503 8.780846 TCCGTTTCTTTTTAGTCTGCATATAA 57.219 30.769 0.00 0.00 0.00 0.98
2301 3504 7.494625 CCTCCGTTTCTTTTTAGTCTGCATATA 59.505 37.037 0.00 0.00 0.00 0.86
2302 3505 6.316390 CCTCCGTTTCTTTTTAGTCTGCATAT 59.684 38.462 0.00 0.00 0.00 1.78
2303 3506 5.642063 CCTCCGTTTCTTTTTAGTCTGCATA 59.358 40.000 0.00 0.00 0.00 3.14
2304 3507 4.455877 CCTCCGTTTCTTTTTAGTCTGCAT 59.544 41.667 0.00 0.00 0.00 3.96
2305 3508 3.813166 CCTCCGTTTCTTTTTAGTCTGCA 59.187 43.478 0.00 0.00 0.00 4.41
2306 3509 4.062991 TCCTCCGTTTCTTTTTAGTCTGC 58.937 43.478 0.00 0.00 0.00 4.26
2307 3510 5.758784 ACTTCCTCCGTTTCTTTTTAGTCTG 59.241 40.000 0.00 0.00 0.00 3.51
2308 3511 5.926663 ACTTCCTCCGTTTCTTTTTAGTCT 58.073 37.500 0.00 0.00 0.00 3.24
2309 3512 7.902387 ATACTTCCTCCGTTTCTTTTTAGTC 57.098 36.000 0.00 0.00 0.00 2.59
2310 3513 7.718314 ACAATACTTCCTCCGTTTCTTTTTAGT 59.282 33.333 0.00 0.00 0.00 2.24
2311 3514 8.095937 ACAATACTTCCTCCGTTTCTTTTTAG 57.904 34.615 0.00 0.00 0.00 1.85
2312 3515 7.935210 AGACAATACTTCCTCCGTTTCTTTTTA 59.065 33.333 0.00 0.00 0.00 1.52
2313 3516 6.771267 AGACAATACTTCCTCCGTTTCTTTTT 59.229 34.615 0.00 0.00 0.00 1.94
2314 3517 6.296803 AGACAATACTTCCTCCGTTTCTTTT 58.703 36.000 0.00 0.00 0.00 2.27
2315 3518 5.866207 AGACAATACTTCCTCCGTTTCTTT 58.134 37.500 0.00 0.00 0.00 2.52
2316 3519 5.485209 AGACAATACTTCCTCCGTTTCTT 57.515 39.130 0.00 0.00 0.00 2.52
2317 3520 5.127356 CCTAGACAATACTTCCTCCGTTTCT 59.873 44.000 0.00 0.00 0.00 2.52
2318 3521 5.126707 TCCTAGACAATACTTCCTCCGTTTC 59.873 44.000 0.00 0.00 0.00 2.78
2319 3522 5.021458 TCCTAGACAATACTTCCTCCGTTT 58.979 41.667 0.00 0.00 0.00 3.60
2320 3523 4.607239 TCCTAGACAATACTTCCTCCGTT 58.393 43.478 0.00 0.00 0.00 4.44
2321 3524 4.246712 TCCTAGACAATACTTCCTCCGT 57.753 45.455 0.00 0.00 0.00 4.69
2322 3525 4.401519 TGTTCCTAGACAATACTTCCTCCG 59.598 45.833 0.00 0.00 0.00 4.63
2323 3526 5.934402 TGTTCCTAGACAATACTTCCTCC 57.066 43.478 0.00 0.00 0.00 4.30
2324 3527 9.315525 GTAAATGTTCCTAGACAATACTTCCTC 57.684 37.037 0.00 0.00 32.47 3.71
2325 3528 9.047947 AGTAAATGTTCCTAGACAATACTTCCT 57.952 33.333 0.00 0.00 34.94 3.36
2409 3612 0.252742 AGGAGGTTGGGAACGGATCT 60.253 55.000 0.00 0.00 0.00 2.75
2418 3621 0.753262 CACTATCGGAGGAGGTTGGG 59.247 60.000 0.00 0.00 0.00 4.12
2419 3622 1.776662 TCACTATCGGAGGAGGTTGG 58.223 55.000 0.00 0.00 0.00 3.77
2420 3623 5.730296 ATAATCACTATCGGAGGAGGTTG 57.270 43.478 0.00 0.00 0.00 3.77
2421 3624 6.749036 AAATAATCACTATCGGAGGAGGTT 57.251 37.500 0.00 0.00 0.00 3.50
2422 3625 6.749036 AAAATAATCACTATCGGAGGAGGT 57.251 37.500 0.00 0.00 0.00 3.85
2536 3739 6.200878 ACCCTATTTGTATCACCCATTAGG 57.799 41.667 0.00 0.00 43.78 2.69
2537 3740 8.656806 TCTTACCCTATTTGTATCACCCATTAG 58.343 37.037 0.00 0.00 0.00 1.73
2538 3741 8.570038 TCTTACCCTATTTGTATCACCCATTA 57.430 34.615 0.00 0.00 0.00 1.90
2539 3742 7.460214 TCTTACCCTATTTGTATCACCCATT 57.540 36.000 0.00 0.00 0.00 3.16
2540 3743 7.349859 TCTTCTTACCCTATTTGTATCACCCAT 59.650 37.037 0.00 0.00 0.00 4.00
2541 3744 6.674861 TCTTCTTACCCTATTTGTATCACCCA 59.325 38.462 0.00 0.00 0.00 4.51
2542 3745 7.133133 TCTTCTTACCCTATTTGTATCACCC 57.867 40.000 0.00 0.00 0.00 4.61
2543 3746 9.274206 GATTCTTCTTACCCTATTTGTATCACC 57.726 37.037 0.00 0.00 0.00 4.02
2544 3747 9.832445 TGATTCTTCTTACCCTATTTGTATCAC 57.168 33.333 0.00 0.00 0.00 3.06
2545 3748 9.832445 GTGATTCTTCTTACCCTATTTGTATCA 57.168 33.333 0.00 0.00 0.00 2.15
2546 3749 9.832445 TGTGATTCTTCTTACCCTATTTGTATC 57.168 33.333 0.00 0.00 0.00 2.24
2549 3752 9.838339 CTATGTGATTCTTCTTACCCTATTTGT 57.162 33.333 0.00 0.00 0.00 2.83
2552 3755 8.875168 CCTCTATGTGATTCTTCTTACCCTATT 58.125 37.037 0.00 0.00 0.00 1.73
2553 3756 8.235230 TCCTCTATGTGATTCTTCTTACCCTAT 58.765 37.037 0.00 0.00 0.00 2.57
2554 3757 7.592736 TCCTCTATGTGATTCTTCTTACCCTA 58.407 38.462 0.00 0.00 0.00 3.53
2555 3758 6.444704 TCCTCTATGTGATTCTTCTTACCCT 58.555 40.000 0.00 0.00 0.00 4.34
2556 3759 6.551601 TCTCCTCTATGTGATTCTTCTTACCC 59.448 42.308 0.00 0.00 0.00 3.69
2557 3760 7.589958 TCTCCTCTATGTGATTCTTCTTACC 57.410 40.000 0.00 0.00 0.00 2.85
2563 3766 9.829507 CAGTTATTTCTCCTCTATGTGATTCTT 57.170 33.333 0.00 0.00 0.00 2.52
2564 3767 9.206690 TCAGTTATTTCTCCTCTATGTGATTCT 57.793 33.333 0.00 0.00 0.00 2.40
2565 3768 9.995003 ATCAGTTATTTCTCCTCTATGTGATTC 57.005 33.333 0.00 0.00 0.00 2.52
2566 3769 9.775854 CATCAGTTATTTCTCCTCTATGTGATT 57.224 33.333 0.00 0.00 0.00 2.57
2567 3770 8.373981 CCATCAGTTATTTCTCCTCTATGTGAT 58.626 37.037 0.00 0.00 0.00 3.06
2568 3771 7.565029 TCCATCAGTTATTTCTCCTCTATGTGA 59.435 37.037 0.00 0.00 0.00 3.58
2584 3787 5.620206 ACGGCAATTGATATCCATCAGTTA 58.380 37.500 10.34 0.00 42.11 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.