Multiple sequence alignment - TraesCS7D01G447200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G447200 chr7D 100.000 3841 0 0 1938 5778 567669966 567673806 0.000000e+00 7094.0
1 TraesCS7D01G447200 chr7D 100.000 1531 0 0 1 1531 567668029 567669559 0.000000e+00 2828.0
2 TraesCS7D01G447200 chr7D 89.222 167 15 3 2333 2499 509207101 509206938 7.590000e-49 206.0
3 TraesCS7D01G447200 chr7D 90.909 154 13 1 2333 2486 592036353 592036505 7.590000e-49 206.0
4 TraesCS7D01G447200 chr7D 92.593 135 7 3 1174 1308 592036226 592036357 2.130000e-44 191.0
5 TraesCS7D01G447200 chr7D 83.459 133 18 4 5636 5765 630496625 630496756 2.830000e-23 121.0
6 TraesCS7D01G447200 chr7A 89.606 2030 144 32 2874 4871 654563923 654565917 0.000000e+00 2518.0
7 TraesCS7D01G447200 chr7A 93.984 881 49 4 4901 5778 654565917 654566796 0.000000e+00 1330.0
8 TraesCS7D01G447200 chr7A 83.447 1317 107 57 271 1531 654561837 654563098 0.000000e+00 1122.0
9 TraesCS7D01G447200 chr7A 85.432 659 48 22 1938 2570 654563108 654563744 4.880000e-180 641.0
10 TraesCS7D01G447200 chr7B 88.748 1813 146 31 2744 4528 621918341 621920123 0.000000e+00 2165.0
11 TraesCS7D01G447200 chr7B 81.562 1280 135 64 275 1531 621916370 621917571 0.000000e+00 963.0
12 TraesCS7D01G447200 chr7B 96.532 519 15 2 4554 5071 621920193 621920709 0.000000e+00 856.0
13 TraesCS7D01G447200 chr7B 87.542 602 45 15 1993 2570 621917621 621918216 0.000000e+00 669.0
14 TraesCS7D01G447200 chr7B 94.318 264 15 0 5281 5544 621920834 621921097 6.970000e-109 405.0
15 TraesCS7D01G447200 chr7B 93.382 272 16 2 5503 5772 621921093 621921364 9.020000e-108 401.0
16 TraesCS7D01G447200 chr7B 95.349 43 2 0 4970 5012 714311653 714311695 1.040000e-07 69.4
17 TraesCS7D01G447200 chr2A 79.310 377 75 3 3945 4320 226557313 226557687 1.600000e-65 261.0
18 TraesCS7D01G447200 chr2A 83.158 190 26 6 4564 4750 661724180 661724366 9.960000e-38 169.0
19 TraesCS7D01G447200 chr2D 78.780 377 77 3 3945 4320 201944057 201943683 3.460000e-62 250.0
20 TraesCS7D01G447200 chr2D 88.623 167 16 3 2333 2499 104547964 104547801 3.530000e-47 200.0
21 TraesCS7D01G447200 chr2D 93.985 133 4 4 1177 1308 165662556 165662685 1.270000e-46 198.0
22 TraesCS7D01G447200 chr2D 83.158 190 26 6 4564 4750 518037170 518037356 9.960000e-38 169.0
23 TraesCS7D01G447200 chr2D 90.667 75 7 0 1066 1140 201949232 201949158 3.680000e-17 100.0
24 TraesCS7D01G447200 chr5D 90.909 154 13 1 2333 2486 92292596 92292748 7.590000e-49 206.0
25 TraesCS7D01G447200 chr5D 88.623 167 15 3 2333 2499 437729732 437729570 3.530000e-47 200.0
26 TraesCS7D01G447200 chr5D 93.333 135 6 3 1174 1308 92292469 92292600 4.570000e-46 196.0
27 TraesCS7D01G447200 chr5A 90.260 154 14 1 2333 2486 460169156 460169308 3.530000e-47 200.0
28 TraesCS7D01G447200 chr5A 88.623 167 16 3 2333 2499 685423520 685423357 3.530000e-47 200.0
29 TraesCS7D01G447200 chr5A 92.593 135 7 3 1174 1308 460169029 460169160 2.130000e-44 191.0
30 TraesCS7D01G447200 chr4B 93.333 135 6 3 1174 1308 156170602 156170471 4.570000e-46 196.0
31 TraesCS7D01G447200 chr5B 92.593 135 7 3 1174 1308 188590926 188590795 2.130000e-44 191.0
32 TraesCS7D01G447200 chr1B 92.593 135 7 3 1174 1308 19402979 19403110 2.130000e-44 191.0
33 TraesCS7D01G447200 chr2B 83.158 190 26 6 4564 4750 609958221 609958407 9.960000e-38 169.0
34 TraesCS7D01G447200 chr2B 89.333 75 8 0 1066 1140 378688043 378687969 1.710000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G447200 chr7D 567668029 567673806 5777 False 4961.000000 7094 100.000000 1 5778 2 chr7D.!!$F2 5777
1 TraesCS7D01G447200 chr7A 654561837 654566796 4959 False 1402.750000 2518 88.117250 271 5778 4 chr7A.!!$F1 5507
2 TraesCS7D01G447200 chr7B 621916370 621921364 4994 False 909.833333 2165 90.347333 275 5772 6 chr7B.!!$F2 5497

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
161 162 0.034198 TTCGTCACGAAAGGATGCCA 59.966 50.0 10.99 0.00 43.00 4.92 F
1167 1238 0.109597 CGGCATTGCGCTTCTTCTTT 60.110 50.0 9.73 0.00 41.91 2.52 F
2090 2187 0.028505 CTGCCTATGCACATCGTTGC 59.971 55.0 0.00 0.00 44.23 4.17 F
3519 3690 0.032815 TGTCAAACGTCGGCATCTCA 59.967 50.0 0.00 0.00 0.00 3.27 F
3612 3783 0.107116 ACACCTACTCCTCGCTCGAT 60.107 55.0 0.00 0.00 0.00 3.59 F
4377 4554 0.116342 TGGGCTTGTCTCCTAGGACA 59.884 55.0 7.62 2.82 43.41 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1181 1252 0.035881 TCAGCCCAAGAACAGAGCAG 59.964 55.000 0.0 0.0 0.00 4.24 R
2803 2960 0.035534 ATCTGCCATACACCGTGCAA 60.036 50.000 0.0 0.0 32.58 4.08 R
3636 3807 0.037605 GGTTGGTCGTCACGAGGAAT 60.038 55.000 0.0 0.0 36.23 3.01 R
4411 4596 1.221840 CCCTCCGTCCATCCTGTTG 59.778 63.158 0.0 0.0 0.00 3.33 R
4522 4717 1.678101 ACAGTTGTTCCTTTGCAGAGC 59.322 47.619 0.0 0.0 0.00 4.09 R
5676 5957 0.394565 CCTATGGGGAAAGGCGAGAG 59.605 60.000 0.0 0.0 37.23 3.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.848846 CATGCAGACAGCTATACAACG 57.151 47.619 0.00 0.00 45.94 4.10
21 22 1.640428 TGCAGACAGCTATACAACGC 58.360 50.000 0.00 0.00 45.94 4.84
22 23 0.572590 GCAGACAGCTATACAACGCG 59.427 55.000 3.53 3.53 41.15 6.01
23 24 1.797713 GCAGACAGCTATACAACGCGA 60.798 52.381 15.93 0.00 41.15 5.87
24 25 2.732366 CAGACAGCTATACAACGCGAT 58.268 47.619 15.93 0.00 0.00 4.58
25 26 2.721603 CAGACAGCTATACAACGCGATC 59.278 50.000 15.93 0.00 0.00 3.69
26 27 2.357952 AGACAGCTATACAACGCGATCA 59.642 45.455 15.93 0.00 0.00 2.92
27 28 3.004839 AGACAGCTATACAACGCGATCAT 59.995 43.478 15.93 2.57 0.00 2.45
28 29 3.052745 ACAGCTATACAACGCGATCATG 58.947 45.455 15.93 8.81 0.00 3.07
29 30 3.243401 ACAGCTATACAACGCGATCATGA 60.243 43.478 15.93 0.00 0.00 3.07
30 31 3.735746 CAGCTATACAACGCGATCATGAA 59.264 43.478 15.93 0.00 0.00 2.57
31 32 3.983988 AGCTATACAACGCGATCATGAAG 59.016 43.478 15.93 2.73 0.00 3.02
32 33 3.422343 GCTATACAACGCGATCATGAAGC 60.422 47.826 15.93 14.37 0.00 3.86
33 34 2.003196 TACAACGCGATCATGAAGCA 57.997 45.000 15.93 4.08 0.00 3.91
34 35 1.372582 ACAACGCGATCATGAAGCAT 58.627 45.000 15.93 8.05 0.00 3.79
35 36 1.063027 ACAACGCGATCATGAAGCATG 59.937 47.619 15.93 19.95 42.60 4.06
36 37 1.063027 CAACGCGATCATGAAGCATGT 59.937 47.619 15.93 12.10 41.98 3.21
37 38 2.223537 ACGCGATCATGAAGCATGTA 57.776 45.000 15.93 0.00 41.98 2.29
38 39 2.130395 ACGCGATCATGAAGCATGTAG 58.870 47.619 15.93 10.49 41.98 2.74
39 40 2.223805 ACGCGATCATGAAGCATGTAGA 60.224 45.455 15.93 0.00 41.98 2.59
40 41 2.796593 CGCGATCATGAAGCATGTAGAA 59.203 45.455 21.31 0.00 41.98 2.10
41 42 3.431233 CGCGATCATGAAGCATGTAGAAT 59.569 43.478 21.31 0.00 41.98 2.40
42 43 4.084171 CGCGATCATGAAGCATGTAGAATT 60.084 41.667 21.31 0.00 41.98 2.17
43 44 5.559608 CGCGATCATGAAGCATGTAGAATTT 60.560 40.000 21.31 0.00 41.98 1.82
44 45 5.624081 GCGATCATGAAGCATGTAGAATTTG 59.376 40.000 18.10 0.00 41.98 2.32
45 46 5.624081 CGATCATGAAGCATGTAGAATTTGC 59.376 40.000 0.00 0.00 41.98 3.68
47 48 6.127810 TCATGAAGCATGTAGAATTTGCTC 57.872 37.500 2.19 0.00 45.54 4.26
48 49 4.604843 TGAAGCATGTAGAATTTGCTCG 57.395 40.909 2.19 0.00 45.54 5.03
49 50 3.374988 TGAAGCATGTAGAATTTGCTCGG 59.625 43.478 2.19 0.00 45.54 4.63
50 51 3.266510 AGCATGTAGAATTTGCTCGGA 57.733 42.857 0.00 0.00 42.88 4.55
51 52 3.609853 AGCATGTAGAATTTGCTCGGAA 58.390 40.909 0.00 0.00 42.88 4.30
52 53 4.009675 AGCATGTAGAATTTGCTCGGAAA 58.990 39.130 0.00 0.00 42.88 3.13
53 54 4.098416 GCATGTAGAATTTGCTCGGAAAC 58.902 43.478 0.00 0.00 33.61 2.78
54 55 4.379394 GCATGTAGAATTTGCTCGGAAACA 60.379 41.667 0.00 0.00 33.61 2.83
55 56 5.698832 CATGTAGAATTTGCTCGGAAACAA 58.301 37.500 0.00 0.00 0.00 2.83
56 57 5.759506 TGTAGAATTTGCTCGGAAACAAA 57.240 34.783 7.93 7.93 0.00 2.83
57 58 5.516090 TGTAGAATTTGCTCGGAAACAAAC 58.484 37.500 7.72 0.00 0.00 2.93
58 59 4.647424 AGAATTTGCTCGGAAACAAACA 57.353 36.364 7.72 0.00 0.00 2.83
59 60 5.004922 AGAATTTGCTCGGAAACAAACAA 57.995 34.783 7.72 0.00 0.00 2.83
60 61 5.600696 AGAATTTGCTCGGAAACAAACAAT 58.399 33.333 7.72 0.14 0.00 2.71
61 62 6.048509 AGAATTTGCTCGGAAACAAACAATT 58.951 32.000 7.72 0.97 0.00 2.32
62 63 5.655893 ATTTGCTCGGAAACAAACAATTG 57.344 34.783 3.24 3.24 42.46 2.32
74 75 5.046910 ACAAACAATTGTCATAAGGCTCG 57.953 39.130 12.39 0.00 46.78 5.03
75 76 4.518970 ACAAACAATTGTCATAAGGCTCGT 59.481 37.500 12.39 0.00 46.78 4.18
76 77 5.703592 ACAAACAATTGTCATAAGGCTCGTA 59.296 36.000 12.39 0.00 46.78 3.43
77 78 6.205853 ACAAACAATTGTCATAAGGCTCGTAA 59.794 34.615 12.39 0.00 46.78 3.18
78 79 5.796350 ACAATTGTCATAAGGCTCGTAAC 57.204 39.130 4.92 0.00 0.00 2.50
79 80 5.242434 ACAATTGTCATAAGGCTCGTAACA 58.758 37.500 4.92 0.00 0.00 2.41
80 81 5.121768 ACAATTGTCATAAGGCTCGTAACAC 59.878 40.000 4.92 0.00 0.00 3.32
81 82 3.945981 TGTCATAAGGCTCGTAACACA 57.054 42.857 0.00 0.00 0.00 3.72
82 83 4.260139 TGTCATAAGGCTCGTAACACAA 57.740 40.909 0.00 0.00 0.00 3.33
83 84 3.991773 TGTCATAAGGCTCGTAACACAAC 59.008 43.478 0.00 0.00 0.00 3.32
84 85 4.243270 GTCATAAGGCTCGTAACACAACT 58.757 43.478 0.00 0.00 0.00 3.16
85 86 4.091509 GTCATAAGGCTCGTAACACAACTG 59.908 45.833 0.00 0.00 0.00 3.16
86 87 1.226746 AAGGCTCGTAACACAACTGC 58.773 50.000 0.00 0.00 0.00 4.40
87 88 0.105964 AGGCTCGTAACACAACTGCA 59.894 50.000 0.00 0.00 0.00 4.41
88 89 1.156736 GGCTCGTAACACAACTGCAT 58.843 50.000 0.00 0.00 0.00 3.96
89 90 1.135972 GGCTCGTAACACAACTGCATG 60.136 52.381 0.00 0.00 0.00 4.06
90 91 1.798223 GCTCGTAACACAACTGCATGA 59.202 47.619 0.00 0.00 0.00 3.07
91 92 2.416547 GCTCGTAACACAACTGCATGAT 59.583 45.455 0.00 0.00 0.00 2.45
92 93 3.484229 GCTCGTAACACAACTGCATGATC 60.484 47.826 0.00 0.00 0.00 2.92
93 94 2.666022 TCGTAACACAACTGCATGATCG 59.334 45.455 0.00 0.00 0.00 3.69
94 95 2.666022 CGTAACACAACTGCATGATCGA 59.334 45.455 0.00 0.00 0.00 3.59
95 96 3.481951 CGTAACACAACTGCATGATCGAC 60.482 47.826 0.00 0.00 0.00 4.20
96 97 2.168326 ACACAACTGCATGATCGACA 57.832 45.000 0.00 0.00 0.00 4.35
97 98 2.703416 ACACAACTGCATGATCGACAT 58.297 42.857 0.00 0.00 40.17 3.06
109 110 5.902613 ATGATCGACATGATTGGTTTGTT 57.097 34.783 0.00 0.00 37.47 2.83
110 111 5.045668 TGATCGACATGATTGGTTTGTTG 57.954 39.130 0.00 0.00 37.47 3.33
111 112 4.759183 TGATCGACATGATTGGTTTGTTGA 59.241 37.500 0.00 0.00 37.47 3.18
112 113 5.240403 TGATCGACATGATTGGTTTGTTGAA 59.760 36.000 0.00 0.00 37.33 2.69
113 114 5.107109 TCGACATGATTGGTTTGTTGAAG 57.893 39.130 0.00 0.00 32.25 3.02
114 115 3.670055 CGACATGATTGGTTTGTTGAAGC 59.330 43.478 0.00 0.00 36.29 3.86
115 116 4.557296 CGACATGATTGGTTTGTTGAAGCT 60.557 41.667 0.00 0.00 36.70 3.74
116 117 5.280654 ACATGATTGGTTTGTTGAAGCTT 57.719 34.783 0.00 0.00 36.70 3.74
117 118 6.403866 ACATGATTGGTTTGTTGAAGCTTA 57.596 33.333 0.00 0.00 36.70 3.09
118 119 6.815089 ACATGATTGGTTTGTTGAAGCTTAA 58.185 32.000 0.00 0.00 36.70 1.85
119 120 7.271511 ACATGATTGGTTTGTTGAAGCTTAAA 58.728 30.769 0.00 0.00 36.70 1.52
120 121 7.439056 ACATGATTGGTTTGTTGAAGCTTAAAG 59.561 33.333 0.00 0.00 36.70 1.85
121 122 6.279882 TGATTGGTTTGTTGAAGCTTAAAGG 58.720 36.000 0.00 0.00 36.70 3.11
122 123 5.923733 TTGGTTTGTTGAAGCTTAAAGGA 57.076 34.783 0.00 0.00 36.70 3.36
123 124 5.257082 TGGTTTGTTGAAGCTTAAAGGAC 57.743 39.130 0.00 0.00 36.70 3.85
124 125 4.098807 TGGTTTGTTGAAGCTTAAAGGACC 59.901 41.667 0.00 7.40 36.70 4.46
125 126 4.287720 GTTTGTTGAAGCTTAAAGGACCG 58.712 43.478 0.00 0.00 0.00 4.79
126 127 1.877443 TGTTGAAGCTTAAAGGACCGC 59.123 47.619 0.00 0.00 0.00 5.68
127 128 1.877443 GTTGAAGCTTAAAGGACCGCA 59.123 47.619 0.00 0.00 0.00 5.69
128 129 2.264005 TGAAGCTTAAAGGACCGCAA 57.736 45.000 0.00 0.00 0.00 4.85
129 130 1.877443 TGAAGCTTAAAGGACCGCAAC 59.123 47.619 0.00 0.00 0.00 4.17
130 131 1.877443 GAAGCTTAAAGGACCGCAACA 59.123 47.619 0.00 0.00 0.00 3.33
131 132 2.200373 AGCTTAAAGGACCGCAACAT 57.800 45.000 0.00 0.00 0.00 2.71
132 133 2.514803 AGCTTAAAGGACCGCAACATT 58.485 42.857 0.00 0.00 0.00 2.71
133 134 2.890945 AGCTTAAAGGACCGCAACATTT 59.109 40.909 0.00 0.00 0.00 2.32
134 135 4.076394 AGCTTAAAGGACCGCAACATTTA 58.924 39.130 0.00 0.00 0.00 1.40
135 136 4.156008 AGCTTAAAGGACCGCAACATTTAG 59.844 41.667 0.00 0.00 0.00 1.85
136 137 4.674362 GCTTAAAGGACCGCAACATTTAGG 60.674 45.833 0.00 0.00 0.00 2.69
137 138 1.834188 AAGGACCGCAACATTTAGGG 58.166 50.000 0.00 0.00 0.00 3.53
138 139 0.988832 AGGACCGCAACATTTAGGGA 59.011 50.000 0.00 0.00 0.00 4.20
139 140 1.353022 AGGACCGCAACATTTAGGGAA 59.647 47.619 0.00 0.00 0.00 3.97
140 141 1.471287 GGACCGCAACATTTAGGGAAC 59.529 52.381 0.00 0.00 0.00 3.62
141 142 1.129811 GACCGCAACATTTAGGGAACG 59.870 52.381 0.00 0.00 0.00 3.95
142 143 1.161843 CCGCAACATTTAGGGAACGT 58.838 50.000 0.00 0.00 0.00 3.99
143 144 1.538075 CCGCAACATTTAGGGAACGTT 59.462 47.619 0.00 0.00 0.00 3.99
144 145 2.413634 CCGCAACATTTAGGGAACGTTC 60.414 50.000 20.14 20.14 0.00 3.95
145 146 2.723618 CGCAACATTTAGGGAACGTTCG 60.724 50.000 21.34 8.68 0.00 3.95
146 147 2.224784 GCAACATTTAGGGAACGTTCGT 59.775 45.455 21.34 13.73 0.00 3.85
147 148 3.666111 GCAACATTTAGGGAACGTTCGTC 60.666 47.826 21.34 15.66 0.00 4.20
148 149 3.389925 ACATTTAGGGAACGTTCGTCA 57.610 42.857 21.34 6.25 0.00 4.35
149 150 3.062042 ACATTTAGGGAACGTTCGTCAC 58.938 45.455 21.34 11.65 0.00 3.67
160 161 2.835605 TTCGTCACGAAAGGATGCC 58.164 52.632 10.99 0.00 43.00 4.40
161 162 0.034198 TTCGTCACGAAAGGATGCCA 59.966 50.000 10.99 0.00 43.00 4.92
162 163 0.249120 TCGTCACGAAAGGATGCCAT 59.751 50.000 0.00 0.00 31.06 4.40
163 164 1.086696 CGTCACGAAAGGATGCCATT 58.913 50.000 0.00 0.00 0.00 3.16
164 165 1.468520 CGTCACGAAAGGATGCCATTT 59.531 47.619 0.00 0.00 0.00 2.32
165 166 2.728846 CGTCACGAAAGGATGCCATTTG 60.729 50.000 0.00 0.00 0.00 2.32
166 167 1.202114 TCACGAAAGGATGCCATTTGC 59.798 47.619 0.00 0.00 41.77 3.68
167 168 0.171007 ACGAAAGGATGCCATTTGCG 59.829 50.000 0.00 0.00 45.60 4.85
168 169 0.451383 CGAAAGGATGCCATTTGCGA 59.549 50.000 0.00 0.00 45.60 5.10
169 170 1.135431 CGAAAGGATGCCATTTGCGAA 60.135 47.619 0.00 0.00 45.60 4.70
170 171 2.262211 GAAAGGATGCCATTTGCGAAC 58.738 47.619 0.00 0.00 45.60 3.95
171 172 1.255882 AAGGATGCCATTTGCGAACA 58.744 45.000 0.00 0.00 45.60 3.18
172 173 1.477553 AGGATGCCATTTGCGAACAT 58.522 45.000 0.00 0.00 45.60 2.71
173 174 1.826720 AGGATGCCATTTGCGAACATT 59.173 42.857 0.00 0.00 45.60 2.71
174 175 2.234414 AGGATGCCATTTGCGAACATTT 59.766 40.909 0.00 0.00 45.60 2.32
175 176 2.604462 GGATGCCATTTGCGAACATTTC 59.396 45.455 0.00 0.00 45.60 2.17
176 177 2.077413 TGCCATTTGCGAACATTTCC 57.923 45.000 0.00 0.00 45.60 3.13
177 178 1.617850 TGCCATTTGCGAACATTTCCT 59.382 42.857 0.00 0.00 45.60 3.36
178 179 2.262211 GCCATTTGCGAACATTTCCTC 58.738 47.619 0.00 0.00 0.00 3.71
179 180 2.094545 GCCATTTGCGAACATTTCCTCT 60.095 45.455 0.00 0.00 0.00 3.69
180 181 3.504863 CCATTTGCGAACATTTCCTCTG 58.495 45.455 0.00 0.00 0.00 3.35
181 182 3.191162 CCATTTGCGAACATTTCCTCTGA 59.809 43.478 0.00 0.00 0.00 3.27
182 183 3.896648 TTTGCGAACATTTCCTCTGAC 57.103 42.857 0.00 0.00 0.00 3.51
183 184 2.542020 TGCGAACATTTCCTCTGACA 57.458 45.000 0.00 0.00 0.00 3.58
184 185 2.416747 TGCGAACATTTCCTCTGACAG 58.583 47.619 0.00 0.00 0.00 3.51
185 186 2.224281 TGCGAACATTTCCTCTGACAGT 60.224 45.455 1.59 0.00 0.00 3.55
186 187 2.808543 GCGAACATTTCCTCTGACAGTT 59.191 45.455 1.59 0.00 0.00 3.16
187 188 3.251004 GCGAACATTTCCTCTGACAGTTT 59.749 43.478 1.59 0.00 0.00 2.66
188 189 4.611581 GCGAACATTTCCTCTGACAGTTTC 60.612 45.833 1.59 0.00 0.00 2.78
189 190 4.511454 CGAACATTTCCTCTGACAGTTTCA 59.489 41.667 1.59 0.00 0.00 2.69
200 201 5.201713 CTGACAGTTTCAGTTGTAGGAGA 57.798 43.478 0.00 0.00 46.12 3.71
201 202 5.788450 CTGACAGTTTCAGTTGTAGGAGAT 58.212 41.667 0.00 0.00 46.12 2.75
202 203 5.541845 TGACAGTTTCAGTTGTAGGAGATG 58.458 41.667 0.00 0.00 0.00 2.90
203 204 4.899502 ACAGTTTCAGTTGTAGGAGATGG 58.100 43.478 0.00 0.00 0.00 3.51
204 205 3.686726 CAGTTTCAGTTGTAGGAGATGGC 59.313 47.826 0.00 0.00 0.00 4.40
205 206 3.327757 AGTTTCAGTTGTAGGAGATGGCA 59.672 43.478 0.00 0.00 0.00 4.92
206 207 4.018960 AGTTTCAGTTGTAGGAGATGGCAT 60.019 41.667 0.00 0.00 0.00 4.40
207 208 4.574674 TTCAGTTGTAGGAGATGGCATT 57.425 40.909 0.00 0.00 0.00 3.56
208 209 4.574674 TCAGTTGTAGGAGATGGCATTT 57.425 40.909 0.00 0.00 0.00 2.32
209 210 4.922206 TCAGTTGTAGGAGATGGCATTTT 58.078 39.130 0.00 0.00 0.00 1.82
210 211 4.943705 TCAGTTGTAGGAGATGGCATTTTC 59.056 41.667 0.00 2.82 0.00 2.29
211 212 4.946157 CAGTTGTAGGAGATGGCATTTTCT 59.054 41.667 0.00 2.08 0.00 2.52
212 213 5.416952 CAGTTGTAGGAGATGGCATTTTCTT 59.583 40.000 3.87 3.78 0.00 2.52
213 214 5.649831 AGTTGTAGGAGATGGCATTTTCTTC 59.350 40.000 3.87 0.02 0.00 2.87
214 215 5.178096 TGTAGGAGATGGCATTTTCTTCA 57.822 39.130 3.87 2.85 0.00 3.02
215 216 5.569355 TGTAGGAGATGGCATTTTCTTCAA 58.431 37.500 3.87 0.00 0.00 2.69
216 217 6.009589 TGTAGGAGATGGCATTTTCTTCAAA 58.990 36.000 3.87 0.00 0.00 2.69
217 218 6.493115 TGTAGGAGATGGCATTTTCTTCAAAA 59.507 34.615 3.87 0.00 35.92 2.44
218 219 6.423776 AGGAGATGGCATTTTCTTCAAAAA 57.576 33.333 0.00 0.00 35.10 1.94
240 241 7.477144 AAAAGCAATACAGTTTTTGGCTTAC 57.523 32.000 0.00 0.00 31.94 2.34
241 242 5.134202 AGCAATACAGTTTTTGGCTTACC 57.866 39.130 0.00 0.00 0.00 2.85
254 255 4.822685 TGGCTTACCATTTGCATGATTT 57.177 36.364 0.00 0.00 42.67 2.17
255 256 5.163281 TGGCTTACCATTTGCATGATTTT 57.837 34.783 0.00 0.00 42.67 1.82
256 257 4.936411 TGGCTTACCATTTGCATGATTTTG 59.064 37.500 0.00 0.00 42.67 2.44
257 258 5.177326 GGCTTACCATTTGCATGATTTTGA 58.823 37.500 0.00 0.00 35.26 2.69
258 259 5.818857 GGCTTACCATTTGCATGATTTTGAT 59.181 36.000 0.00 0.00 35.26 2.57
259 260 6.238266 GGCTTACCATTTGCATGATTTTGATG 60.238 38.462 0.00 0.00 35.26 3.07
260 261 6.314400 GCTTACCATTTGCATGATTTTGATGT 59.686 34.615 0.00 0.00 31.07 3.06
261 262 7.598189 TTACCATTTGCATGATTTTGATGTG 57.402 32.000 0.00 0.00 31.07 3.21
262 263 4.393680 ACCATTTGCATGATTTTGATGTGC 59.606 37.500 0.00 0.00 36.39 4.57
263 264 4.393371 CCATTTGCATGATTTTGATGTGCA 59.607 37.500 0.00 0.00 43.33 4.57
264 265 5.447144 CCATTTGCATGATTTTGATGTGCAG 60.447 40.000 0.00 0.00 45.31 4.41
265 266 3.239587 TGCATGATTTTGATGTGCAGG 57.760 42.857 0.00 0.00 40.51 4.85
266 267 1.931172 GCATGATTTTGATGTGCAGGC 59.069 47.619 0.00 0.00 35.93 4.85
267 268 2.190161 CATGATTTTGATGTGCAGGCG 58.810 47.619 0.00 0.00 0.00 5.52
268 269 1.246649 TGATTTTGATGTGCAGGCGT 58.753 45.000 0.00 0.00 0.00 5.68
269 270 1.612950 TGATTTTGATGTGCAGGCGTT 59.387 42.857 0.00 0.00 0.00 4.84
272 273 1.523154 TTTGATGTGCAGGCGTTCCC 61.523 55.000 0.00 0.00 0.00 3.97
284 285 1.268625 GGCGTTCCCTTGTTAAACAGG 59.731 52.381 0.00 0.00 0.00 4.00
337 338 6.459923 AGATTAGCGGAAAGATCTGATAACC 58.540 40.000 0.00 0.00 43.49 2.85
425 428 6.359545 CACAAATCATGCTCACAACAATTTG 58.640 36.000 8.39 8.39 38.11 2.32
470 476 3.554934 GTGGTATCCAAATCATGCCTCA 58.445 45.455 0.00 0.00 34.18 3.86
533 539 3.670377 GTTTCCACCCACGCAGCC 61.670 66.667 0.00 0.00 0.00 4.85
534 540 4.196778 TTTCCACCCACGCAGCCA 62.197 61.111 0.00 0.00 0.00 4.75
535 541 4.947147 TTCCACCCACGCAGCCAC 62.947 66.667 0.00 0.00 0.00 5.01
559 565 4.329545 GTCCCGTGAAGCAGGCCA 62.330 66.667 5.01 0.00 0.00 5.36
579 585 3.660111 GTGCCAACTCACGCCACC 61.660 66.667 0.00 0.00 0.00 4.61
604 625 0.674581 CCTGCCTCAAATCACGAGCA 60.675 55.000 0.00 0.00 0.00 4.26
605 626 0.725686 CTGCCTCAAATCACGAGCAG 59.274 55.000 0.00 0.00 32.40 4.24
608 629 0.737367 CCTCAAATCACGAGCAGCGA 60.737 55.000 5.99 0.00 44.57 4.93
609 630 0.644331 CTCAAATCACGAGCAGCGAG 59.356 55.000 5.99 0.00 44.57 5.03
625 646 1.025113 CGAGCACCACCGTCTCTCTA 61.025 60.000 0.00 0.00 0.00 2.43
645 666 3.206211 CTCTCTCCTCCGGCGATGC 62.206 68.421 9.30 0.00 0.00 3.91
648 669 2.664185 CTCCTCCGGCGATGCATG 60.664 66.667 9.30 0.00 0.00 4.06
649 670 4.240103 TCCTCCGGCGATGCATGG 62.240 66.667 9.30 3.37 0.00 3.66
656 678 1.303888 GGCGATGCATGGATCCCAT 60.304 57.895 20.14 5.41 46.37 4.00
672 694 1.715019 CCATCCCGGCCCCAAATCTA 61.715 60.000 0.00 0.00 0.00 1.98
676 698 1.526917 CCGGCCCCAAATCTAGCAG 60.527 63.158 0.00 0.00 0.00 4.24
714 736 4.873129 CACGCATCCTCCCCGTCG 62.873 72.222 0.00 0.00 32.18 5.12
781 803 4.040339 TGCGCCTCATTTATATTCTCTCCA 59.960 41.667 4.18 0.00 0.00 3.86
784 806 5.814705 CGCCTCATTTATATTCTCTCCATCC 59.185 44.000 0.00 0.00 0.00 3.51
785 807 6.118852 GCCTCATTTATATTCTCTCCATCCC 58.881 44.000 0.00 0.00 0.00 3.85
786 808 6.069731 GCCTCATTTATATTCTCTCCATCCCT 60.070 42.308 0.00 0.00 0.00 4.20
787 809 7.563906 CCTCATTTATATTCTCTCCATCCCTC 58.436 42.308 0.00 0.00 0.00 4.30
788 810 7.365473 CCTCATTTATATTCTCTCCATCCCTCC 60.365 44.444 0.00 0.00 0.00 4.30
789 811 7.259391 TCATTTATATTCTCTCCATCCCTCCT 58.741 38.462 0.00 0.00 0.00 3.69
790 812 7.401493 TCATTTATATTCTCTCCATCCCTCCTC 59.599 40.741 0.00 0.00 0.00 3.71
791 813 2.008242 ATTCTCTCCATCCCTCCTCG 57.992 55.000 0.00 0.00 0.00 4.63
792 814 0.757188 TTCTCTCCATCCCTCCTCGC 60.757 60.000 0.00 0.00 0.00 5.03
793 815 2.123251 TCTCCATCCCTCCTCGCC 60.123 66.667 0.00 0.00 0.00 5.54
812 834 4.899239 GCCCAGCCAGATCGACCG 62.899 72.222 0.00 0.00 0.00 4.79
886 919 3.233980 ACCTCGCTCCACTGCACA 61.234 61.111 0.00 0.00 0.00 4.57
890 923 2.029518 CGCTCCACTGCACACTCA 59.970 61.111 0.00 0.00 0.00 3.41
900 933 1.002888 CTGCACACTCATCACTCCCTT 59.997 52.381 0.00 0.00 0.00 3.95
901 934 1.271001 TGCACACTCATCACTCCCTTG 60.271 52.381 0.00 0.00 0.00 3.61
902 935 1.446907 CACACTCATCACTCCCTTGC 58.553 55.000 0.00 0.00 0.00 4.01
903 936 1.002888 CACACTCATCACTCCCTTGCT 59.997 52.381 0.00 0.00 0.00 3.91
904 937 1.277557 ACACTCATCACTCCCTTGCTC 59.722 52.381 0.00 0.00 0.00 4.26
907 940 1.829849 CTCATCACTCCCTTGCTCAGA 59.170 52.381 0.00 0.00 0.00 3.27
908 941 1.829849 TCATCACTCCCTTGCTCAGAG 59.170 52.381 0.00 0.00 0.00 3.35
910 943 1.078567 CACTCCCTTGCTCAGAGGC 60.079 63.158 0.00 0.00 32.74 4.70
911 944 1.229464 ACTCCCTTGCTCAGAGGCT 60.229 57.895 0.00 0.00 32.74 4.58
912 945 1.221293 CTCCCTTGCTCAGAGGCTG 59.779 63.158 0.00 0.00 32.74 4.85
926 959 3.535962 GCTGAGGAGGCGAGGGAG 61.536 72.222 0.00 0.00 0.00 4.30
927 960 3.535962 CTGAGGAGGCGAGGGAGC 61.536 72.222 0.00 0.00 0.00 4.70
928 961 4.382541 TGAGGAGGCGAGGGAGCA 62.383 66.667 0.00 0.00 39.27 4.26
929 962 3.844090 GAGGAGGCGAGGGAGCAC 61.844 72.222 0.00 0.00 39.27 4.40
930 963 4.390556 AGGAGGCGAGGGAGCACT 62.391 66.667 0.00 0.00 39.27 4.40
931 964 4.154347 GGAGGCGAGGGAGCACTG 62.154 72.222 0.00 0.00 39.27 3.66
932 965 3.386237 GAGGCGAGGGAGCACTGT 61.386 66.667 0.00 0.00 39.27 3.55
933 966 2.037367 AGGCGAGGGAGCACTGTA 59.963 61.111 0.00 0.00 39.27 2.74
934 967 2.184579 GGCGAGGGAGCACTGTAC 59.815 66.667 0.00 0.00 39.27 2.90
935 968 2.184579 GCGAGGGAGCACTGTACC 59.815 66.667 0.00 0.00 37.05 3.34
936 969 2.490217 CGAGGGAGCACTGTACCG 59.510 66.667 0.00 0.00 0.00 4.02
937 970 2.044555 CGAGGGAGCACTGTACCGA 61.045 63.158 0.00 0.00 0.00 4.69
938 971 1.592400 CGAGGGAGCACTGTACCGAA 61.592 60.000 0.00 0.00 0.00 4.30
939 972 0.173708 GAGGGAGCACTGTACCGAAG 59.826 60.000 0.00 0.00 0.00 3.79
994 1027 2.035961 TGTTGACGAAGGAGACTGGAAG 59.964 50.000 0.00 0.00 42.68 3.46
995 1028 0.603569 TGACGAAGGAGACTGGAAGC 59.396 55.000 0.00 0.00 42.68 3.86
1003 1036 0.529555 GAGACTGGAAGCGGAGATGC 60.530 60.000 0.00 0.00 37.60 3.91
1042 1075 2.042843 TCTTCCTCCTCCTCGCCC 60.043 66.667 0.00 0.00 0.00 6.13
1043 1076 2.042435 CTTCCTCCTCCTCGCCCT 60.042 66.667 0.00 0.00 0.00 5.19
1147 1180 1.445582 AAGCAGCAGGTACGTACGC 60.446 57.895 16.72 16.97 0.00 4.42
1152 1185 4.118995 CAGGTACGTACGCCGGCA 62.119 66.667 28.98 4.32 42.24 5.69
1153 1186 3.142838 AGGTACGTACGCCGGCAT 61.143 61.111 28.98 15.72 42.24 4.40
1154 1187 2.202783 GGTACGTACGCCGGCATT 60.203 61.111 28.98 15.55 42.24 3.56
1155 1188 2.519175 GGTACGTACGCCGGCATTG 61.519 63.158 28.98 13.29 42.24 2.82
1156 1189 2.886604 TACGTACGCCGGCATTGC 60.887 61.111 28.98 15.17 42.24 3.56
1167 1238 0.109597 CGGCATTGCGCTTCTTCTTT 60.110 50.000 9.73 0.00 41.91 2.52
1181 1252 6.634837 CGCTTCTTCTTTTTCTTTCTTCTTCC 59.365 38.462 0.00 0.00 0.00 3.46
1313 1397 2.909965 TTCAACAACCTGCCCGCC 60.910 61.111 0.00 0.00 0.00 6.13
1339 1423 5.608860 CCTTCCTCCTCTCCTGGTAATTATT 59.391 44.000 0.00 0.00 0.00 1.40
1340 1424 6.239743 CCTTCCTCCTCTCCTGGTAATTATTC 60.240 46.154 0.00 0.00 0.00 1.75
1344 1428 6.296145 CCTCCTCTCCTGGTAATTATTCCATC 60.296 46.154 0.00 0.00 33.01 3.51
1345 1429 6.150332 TCCTCTCCTGGTAATTATTCCATCA 58.850 40.000 0.00 0.00 33.01 3.07
1346 1430 6.619437 TCCTCTCCTGGTAATTATTCCATCAA 59.381 38.462 0.00 0.00 33.01 2.57
1350 1434 9.713684 TCTCCTGGTAATTATTCCATCAATTTT 57.286 29.630 0.00 0.00 33.01 1.82
1352 1436 9.486123 TCCTGGTAATTATTCCATCAATTTTCA 57.514 29.630 0.00 0.00 33.01 2.69
1382 1479 0.038343 GCCCGTACGTTTCCACTGTA 60.038 55.000 15.21 0.00 0.00 2.74
1388 1485 2.298411 ACGTTTCCACTGTACGTGTT 57.702 45.000 5.75 0.00 45.67 3.32
1411 1508 2.538141 CCTCTCCCCAGTTTGGCCA 61.538 63.158 0.00 0.00 35.79 5.36
1452 1549 3.951306 CACAGATGCTAGTTCTCTCTCG 58.049 50.000 0.00 0.00 0.00 4.04
1460 1557 1.865622 GTTCTCTCTCGACGCTGCG 60.866 63.158 21.91 21.91 0.00 5.18
1509 1606 5.368989 CCCATTTCCGAGCTTATCTAACTT 58.631 41.667 0.00 0.00 0.00 2.66
2018 2115 4.394439 TTTTCCCCTTTCTGTTTTTCGG 57.606 40.909 0.00 0.00 0.00 4.30
2019 2116 1.324383 TCCCCTTTCTGTTTTTCGGC 58.676 50.000 0.00 0.00 0.00 5.54
2020 2117 1.036707 CCCCTTTCTGTTTTTCGGCA 58.963 50.000 0.00 0.00 0.00 5.69
2021 2118 1.618343 CCCCTTTCTGTTTTTCGGCAT 59.382 47.619 0.00 0.00 0.00 4.40
2022 2119 2.037121 CCCCTTTCTGTTTTTCGGCATT 59.963 45.455 0.00 0.00 0.00 3.56
2023 2120 3.494223 CCCCTTTCTGTTTTTCGGCATTT 60.494 43.478 0.00 0.00 0.00 2.32
2061 2158 6.786122 ACTACTGGGTAAATGCCTTTCTTTA 58.214 36.000 0.00 0.00 0.00 1.85
2064 2161 7.170393 ACTGGGTAAATGCCTTTCTTTATTC 57.830 36.000 0.00 0.00 0.00 1.75
2079 2176 8.492673 TTTCTTTATTCACACTACTGCCTATG 57.507 34.615 0.00 0.00 0.00 2.23
2080 2177 6.049149 TCTTTATTCACACTACTGCCTATGC 58.951 40.000 0.00 0.00 38.26 3.14
2083 2180 1.899142 TCACACTACTGCCTATGCACA 59.101 47.619 0.00 0.00 44.23 4.57
2090 2187 0.028505 CTGCCTATGCACATCGTTGC 59.971 55.000 0.00 0.00 44.23 4.17
2095 2192 0.747644 TATGCACATCGTTGCTGGGG 60.748 55.000 0.00 0.00 43.41 4.96
2096 2193 4.120331 GCACATCGTTGCTGGGGC 62.120 66.667 0.00 0.00 39.59 5.80
2106 2203 1.000521 TGCTGGGGCAGAGGAATTG 60.001 57.895 0.00 0.00 44.28 2.32
2107 2204 1.755783 GCTGGGGCAGAGGAATTGG 60.756 63.158 0.00 0.00 38.54 3.16
2110 2207 0.251742 TGGGGCAGAGGAATTGGTTG 60.252 55.000 0.00 0.00 0.00 3.77
2128 2225 6.023357 TGGTTGTCCAAATGTGAACATATG 57.977 37.500 0.00 0.00 41.25 1.78
2129 2226 5.538053 TGGTTGTCCAAATGTGAACATATGT 59.462 36.000 1.41 1.41 41.25 2.29
2131 2228 5.058149 TGTCCAAATGTGAACATATGTGC 57.942 39.130 9.63 8.21 35.10 4.57
2139 2236 9.524106 CAAATGTGAACATATGTGCAAGAATAT 57.476 29.630 18.45 5.70 34.88 1.28
2143 2240 5.593502 TGAACATATGTGCAAGAATATGCCA 59.406 36.000 14.51 15.04 45.83 4.92
2147 2244 6.097270 ACATATGTGCAAGAATATGCCAACTT 59.903 34.615 7.78 3.27 45.83 2.66
2151 2248 3.831333 TGCAAGAATATGCCAACTTCCAA 59.169 39.130 0.00 0.00 45.83 3.53
2204 2322 2.561733 TTGGTTCAGTAGATCGAGCG 57.438 50.000 0.00 0.00 0.00 5.03
2313 2436 1.117994 TGGCAGGCAAACAAATGTCA 58.882 45.000 0.00 0.00 0.00 3.58
2379 2502 2.562298 CAGTGCCATCTCTATCCTCTCC 59.438 54.545 0.00 0.00 0.00 3.71
2389 2512 9.223291 CCATCTCTATCCTCTCCCAAATAATAT 57.777 37.037 0.00 0.00 0.00 1.28
2466 2590 3.105937 GGTGAACGAAAGAAACAAGTGC 58.894 45.455 0.00 0.00 0.00 4.40
2467 2591 3.426963 GGTGAACGAAAGAAACAAGTGCA 60.427 43.478 0.00 0.00 0.00 4.57
2473 2597 4.393680 ACGAAAGAAACAAGTGCACAACTA 59.606 37.500 21.04 0.00 38.56 2.24
2562 2686 4.102113 GCCTTCCAAGTGTGGCAT 57.898 55.556 0.00 0.00 45.54 4.40
2570 2694 1.745087 CCAAGTGTGGCATCCATGTAC 59.255 52.381 0.00 0.00 38.35 2.90
2574 2698 1.210478 GTGTGGCATCCATGTACCTCT 59.790 52.381 0.00 0.00 35.28 3.69
2609 2766 7.067008 CCTTATTATCGTGAAGGAAACCACATT 59.933 37.037 0.00 0.00 42.05 2.71
2611 2768 9.621629 TTATTATCGTGAAGGAAACCACATTAT 57.378 29.630 0.00 0.00 33.13 1.28
2618 2775 6.770785 GTGAAGGAAACCACATTATAGCCATA 59.229 38.462 0.00 0.00 33.72 2.74
2619 2776 7.284489 GTGAAGGAAACCACATTATAGCCATAA 59.716 37.037 0.00 0.00 33.72 1.90
2621 2778 8.782137 AAGGAAACCACATTATAGCCATAAAT 57.218 30.769 0.00 0.00 30.50 1.40
2622 2779 8.782137 AGGAAACCACATTATAGCCATAAATT 57.218 30.769 0.00 0.00 30.50 1.82
2623 2780 9.875708 AGGAAACCACATTATAGCCATAAATTA 57.124 29.630 0.00 0.00 30.50 1.40
2674 2831 6.963049 ATGAAACAGGTATGTAGTTCGTTC 57.037 37.500 0.00 0.00 39.29 3.95
2675 2832 6.092955 TGAAACAGGTATGTAGTTCGTTCT 57.907 37.500 0.00 0.00 39.29 3.01
2676 2833 6.154445 TGAAACAGGTATGTAGTTCGTTCTC 58.846 40.000 0.00 0.00 39.29 2.87
2677 2834 4.352600 ACAGGTATGTAGTTCGTTCTCG 57.647 45.455 0.00 0.00 38.09 4.04
2681 2838 6.515531 ACAGGTATGTAGTTCGTTCTCGAAAA 60.516 38.462 4.68 0.00 46.47 2.29
2705 2862 7.827156 AAACGTACGTAGTTCATATATGACG 57.173 36.000 23.12 16.87 37.78 4.35
2706 2863 6.530913 ACGTACGTAGTTCATATATGACGT 57.469 37.500 24.68 24.68 37.78 4.34
2707 2864 7.637709 ACGTACGTAGTTCATATATGACGTA 57.362 36.000 21.41 23.19 37.78 3.57
2708 2865 7.724205 ACGTACGTAGTTCATATATGACGTAG 58.276 38.462 25.66 21.89 37.78 3.51
2709 2866 7.382488 ACGTACGTAGTTCATATATGACGTAGT 59.618 37.037 25.66 22.29 43.61 2.73
2710 2867 8.217115 CGTACGTAGTTCATATATGACGTAGTT 58.783 37.037 25.66 11.59 39.10 2.24
2741 2898 8.732746 AACAACTAGTTTTCAGTGTTATCTGT 57.267 30.769 5.07 0.00 37.03 3.41
2742 2899 8.366671 ACAACTAGTTTTCAGTGTTATCTGTC 57.633 34.615 5.07 0.00 36.85 3.51
2781 2938 7.599621 TGAATTTTAACTGCATTGGTCTCATTG 59.400 33.333 0.00 0.00 0.00 2.82
2788 2945 5.048504 ACTGCATTGGTCTCATTGTTACTTG 60.049 40.000 0.00 0.00 0.00 3.16
2795 2952 6.768483 TGGTCTCATTGTTACTTGATCTTGA 58.232 36.000 0.00 0.00 0.00 3.02
2797 2954 7.388776 TGGTCTCATTGTTACTTGATCTTGAAG 59.611 37.037 0.00 0.00 0.00 3.02
2799 2956 6.372659 TCTCATTGTTACTTGATCTTGAAGCC 59.627 38.462 0.00 0.00 0.00 4.35
2800 2957 6.003326 TCATTGTTACTTGATCTTGAAGCCA 58.997 36.000 0.00 0.00 0.00 4.75
2802 2959 6.899393 TTGTTACTTGATCTTGAAGCCATT 57.101 33.333 0.00 0.00 0.00 3.16
2803 2960 6.899393 TGTTACTTGATCTTGAAGCCATTT 57.101 33.333 0.00 0.00 0.00 2.32
2804 2961 7.288810 TGTTACTTGATCTTGAAGCCATTTT 57.711 32.000 0.00 0.00 0.00 1.82
2809 2966 2.420628 TCTTGAAGCCATTTTGCACG 57.579 45.000 0.00 0.00 0.00 5.34
2810 2967 1.000385 TCTTGAAGCCATTTTGCACGG 60.000 47.619 0.00 0.00 0.00 4.94
2817 2974 1.735369 GCCATTTTGCACGGTGTATGG 60.735 52.381 19.80 19.80 36.47 2.74
2819 2976 1.067985 CATTTTGCACGGTGTATGGCA 60.068 47.619 10.24 0.00 0.00 4.92
2828 2991 2.290008 ACGGTGTATGGCAGATGTCAAA 60.290 45.455 0.00 0.00 31.21 2.69
2871 3034 4.216257 ACTGCACAAAACAATATCGCTTCT 59.784 37.500 0.00 0.00 0.00 2.85
2890 3054 4.801330 TCTTGTCTGACGGTTCATACAT 57.199 40.909 2.98 0.00 38.32 2.29
2891 3055 5.907866 TCTTGTCTGACGGTTCATACATA 57.092 39.130 2.98 0.00 38.32 2.29
2892 3056 5.647589 TCTTGTCTGACGGTTCATACATAC 58.352 41.667 2.98 0.00 38.32 2.39
2893 3057 5.184287 TCTTGTCTGACGGTTCATACATACA 59.816 40.000 2.98 0.00 38.32 2.29
2894 3058 5.592104 TGTCTGACGGTTCATACATACAT 57.408 39.130 2.98 0.00 34.74 2.29
2895 3059 5.972935 TGTCTGACGGTTCATACATACATT 58.027 37.500 2.98 0.00 34.74 2.71
2896 3060 5.810074 TGTCTGACGGTTCATACATACATTG 59.190 40.000 2.98 0.00 34.74 2.82
2897 3061 5.810587 GTCTGACGGTTCATACATACATTGT 59.189 40.000 0.00 0.00 42.62 2.71
3113 3277 2.443390 ATCCCGGTCCCGTTCGAT 60.443 61.111 0.00 0.23 37.81 3.59
3178 3342 2.158755 AGCTCAACCACACTGTAAGCTT 60.159 45.455 3.48 3.48 37.60 3.74
3179 3343 3.071023 AGCTCAACCACACTGTAAGCTTA 59.929 43.478 0.86 0.86 37.60 3.09
3180 3344 4.003648 GCTCAACCACACTGTAAGCTTAT 58.996 43.478 9.88 0.00 37.60 1.73
3181 3345 4.142816 GCTCAACCACACTGTAAGCTTATG 60.143 45.833 9.88 6.73 37.60 1.90
3182 3346 4.968259 TCAACCACACTGTAAGCTTATGT 58.032 39.130 9.88 7.41 37.60 2.29
3183 3347 5.373222 TCAACCACACTGTAAGCTTATGTT 58.627 37.500 9.88 2.85 37.60 2.71
3184 3348 5.468746 TCAACCACACTGTAAGCTTATGTTC 59.531 40.000 9.88 0.00 37.60 3.18
3185 3349 5.228945 ACCACACTGTAAGCTTATGTTCT 57.771 39.130 9.88 0.00 37.60 3.01
3186 3350 4.997395 ACCACACTGTAAGCTTATGTTCTG 59.003 41.667 9.88 8.97 37.60 3.02
3187 3351 4.142816 CCACACTGTAAGCTTATGTTCTGC 60.143 45.833 9.88 0.00 37.60 4.26
3188 3352 4.692625 CACACTGTAAGCTTATGTTCTGCT 59.307 41.667 9.88 0.00 37.60 4.24
3189 3353 5.180117 CACACTGTAAGCTTATGTTCTGCTT 59.820 40.000 9.88 0.00 46.87 3.91
3199 3363 7.885297 AGCTTATGTTCTGCTTATGTTTTTGA 58.115 30.769 0.00 0.00 32.61 2.69
3202 3366 9.630098 CTTATGTTCTGCTTATGTTTTTGATGT 57.370 29.630 0.00 0.00 0.00 3.06
3206 3370 8.791675 TGTTCTGCTTATGTTTTTGATGTATCA 58.208 29.630 0.00 0.00 34.44 2.15
3222 3386 4.475028 TGTATCAAAGCGCAACATTTCAG 58.525 39.130 11.47 0.00 0.00 3.02
3228 3399 3.665745 AGCGCAACATTTCAGGAAAAT 57.334 38.095 11.47 0.00 38.11 1.82
3232 3403 6.165577 AGCGCAACATTTCAGGAAAATAATT 58.834 32.000 11.47 0.00 35.77 1.40
3234 3405 6.090628 GCGCAACATTTCAGGAAAATAATTGA 59.909 34.615 0.30 0.00 36.05 2.57
3259 3430 5.819825 ACCTGAACTGAAACTTGAAACTC 57.180 39.130 0.00 0.00 0.00 3.01
3280 3451 3.579586 TCTGCAGGATTTGAAAGGCATTT 59.420 39.130 15.13 0.00 0.00 2.32
3381 3552 7.778382 ACAGTAGACCAAGGTAAAATTTTCAGT 59.222 33.333 6.72 0.00 0.00 3.41
3395 3566 5.972107 ATTTTCAGTGTAGCAAAGCAGAT 57.028 34.783 0.00 0.00 0.00 2.90
3397 3568 3.407424 TCAGTGTAGCAAAGCAGATGT 57.593 42.857 0.00 0.00 0.00 3.06
3423 3594 9.066892 TCAAAAATAGCTGACAAGTACTTCATT 57.933 29.630 4.77 0.00 0.00 2.57
3427 3598 9.899226 AAATAGCTGACAAGTACTTCATTTTTC 57.101 29.630 4.77 0.00 0.00 2.29
3460 3631 4.218852 AGACAGAGTTGTACTGAACTAGCC 59.781 45.833 0.00 0.00 37.76 3.93
3462 3633 4.021894 ACAGAGTTGTACTGAACTAGCCTG 60.022 45.833 0.00 9.76 36.27 4.85
3470 3641 6.806751 TGTACTGAACTAGCCTGATGTAATC 58.193 40.000 0.00 0.00 45.83 1.75
3475 3646 6.042777 TGAACTAGCCTGATGTAATCTTTCG 58.957 40.000 0.00 0.00 45.81 3.46
3510 3681 1.592830 CGTTTTCGGGTGTCAAACGTC 60.593 52.381 7.97 0.00 44.87 4.34
3519 3690 0.032815 TGTCAAACGTCGGCATCTCA 59.967 50.000 0.00 0.00 0.00 3.27
3528 3699 1.079127 CGGCATCTCAACCTCGGTT 60.079 57.895 0.00 0.00 39.13 4.44
3603 3774 1.279271 ACCATGCAGAACACCTACTCC 59.721 52.381 0.00 0.00 0.00 3.85
3612 3783 0.107116 ACACCTACTCCTCGCTCGAT 60.107 55.000 0.00 0.00 0.00 3.59
3615 3786 1.025812 CCTACTCCTCGCTCGATGTT 58.974 55.000 0.00 0.00 0.00 2.71
3621 3792 0.526524 CCTCGCTCGATGTTCACCTC 60.527 60.000 0.00 0.00 0.00 3.85
3636 3807 1.379977 CCTCGGCCAGTCCTACTCA 60.380 63.158 2.24 0.00 0.00 3.41
3649 3820 2.014857 CCTACTCATTCCTCGTGACGA 58.985 52.381 7.70 7.70 0.00 4.20
3652 3823 0.526211 CTCATTCCTCGTGACGACCA 59.474 55.000 2.39 0.00 0.00 4.02
3702 3873 2.048597 TCGACGCGCTTCACCAAT 60.049 55.556 14.72 0.00 0.00 3.16
3705 3876 3.083600 GACGCGCTTCACCAATCCG 62.084 63.158 5.73 0.00 0.00 4.18
3756 3927 1.079127 CAACTCGAATGGCGTCCCT 60.079 57.895 0.00 0.00 41.80 4.20
3816 3987 1.552337 GACTGGTCTCTGAATCAGGCA 59.448 52.381 10.71 0.00 35.47 4.75
3834 4005 3.199946 AGGCAAGATCAATCCGGTAAGAA 59.800 43.478 0.00 0.00 0.00 2.52
3835 4006 3.312697 GGCAAGATCAATCCGGTAAGAAC 59.687 47.826 0.00 0.00 0.00 3.01
3836 4007 3.001330 GCAAGATCAATCCGGTAAGAACG 59.999 47.826 0.00 0.00 0.00 3.95
3872 4043 3.623906 ACTGAAGTCACATATGCTGCT 57.376 42.857 1.58 0.00 0.00 4.24
3931 4108 5.213891 TGCTACTCTGAATGACTGAAACA 57.786 39.130 0.00 0.00 0.00 2.83
4020 4197 0.756903 ACTACGGCCAAGTGAACACT 59.243 50.000 2.24 1.32 44.94 3.55
4026 4203 1.429463 GCCAAGTGAACACTACGAGG 58.571 55.000 7.90 8.94 41.58 4.63
4098 4275 1.157870 CGGTGAACAGCGTGTCCTTT 61.158 55.000 16.42 0.00 46.01 3.11
4099 4276 0.307760 GGTGAACAGCGTGTCCTTTG 59.692 55.000 0.00 0.00 0.00 2.77
4101 4278 1.013596 TGAACAGCGTGTCCTTTGTG 58.986 50.000 0.00 0.00 0.00 3.33
4107 4284 2.594592 GTGTCCTTTGTGCCGGCT 60.595 61.111 29.70 0.00 0.00 5.52
4149 4326 2.418746 CGACTTCTACAACATCCAGGGG 60.419 54.545 0.00 0.00 0.00 4.79
4263 4440 1.209640 GGTCGTCTTCGAGAACGCT 59.790 57.895 14.61 0.00 46.96 5.07
4319 4496 1.679977 CCTTCTGGGTCGTCGGGTA 60.680 63.158 0.00 0.00 0.00 3.69
4329 4506 2.709999 CGTCGGGTACGTGCGTTTC 61.710 63.158 1.66 0.00 46.72 2.78
4330 4507 1.661197 GTCGGGTACGTGCGTTTCA 60.661 57.895 1.66 0.00 41.85 2.69
4331 4508 1.661197 TCGGGTACGTGCGTTTCAC 60.661 57.895 1.66 0.00 42.23 3.18
4333 4510 2.660612 GGGTACGTGCGTTTCACCG 61.661 63.158 1.66 0.00 42.69 4.94
4342 4519 4.776647 GTTTCACCGCGGCATGCC 62.777 66.667 28.58 27.67 42.08 4.40
4353 4530 2.202570 GCATGCCGCTTCTTGCAG 60.203 61.111 6.36 0.00 41.46 4.41
4367 4544 1.404391 CTTGCAGATCATGGGCTTGTC 59.596 52.381 0.00 0.00 0.00 3.18
4369 4546 1.307097 GCAGATCATGGGCTTGTCTC 58.693 55.000 0.00 0.00 0.00 3.36
4370 4547 1.964552 CAGATCATGGGCTTGTCTCC 58.035 55.000 0.00 0.00 0.00 3.71
4371 4548 1.489649 CAGATCATGGGCTTGTCTCCT 59.510 52.381 0.00 0.00 0.00 3.69
4372 4549 2.702478 CAGATCATGGGCTTGTCTCCTA 59.298 50.000 0.00 0.00 0.00 2.94
4373 4550 2.971330 AGATCATGGGCTTGTCTCCTAG 59.029 50.000 0.00 0.00 0.00 3.02
4374 4551 1.500474 TCATGGGCTTGTCTCCTAGG 58.500 55.000 0.82 0.82 0.00 3.02
4376 4553 1.139853 CATGGGCTTGTCTCCTAGGAC 59.860 57.143 7.62 0.00 36.81 3.85
4377 4554 0.116342 TGGGCTTGTCTCCTAGGACA 59.884 55.000 7.62 2.82 43.41 4.02
4378 4555 0.537653 GGGCTTGTCTCCTAGGACAC 59.462 60.000 7.62 9.05 44.55 3.67
4379 4556 0.537653 GGCTTGTCTCCTAGGACACC 59.462 60.000 13.98 4.91 44.55 4.16
4393 4578 1.940613 GGACACCGATTTGTATGGCTC 59.059 52.381 0.00 0.00 0.00 4.70
4410 4595 3.091545 GGCTCACCATTGATTTCTGGAA 58.908 45.455 0.00 0.00 36.35 3.53
4411 4596 3.119352 GGCTCACCATTGATTTCTGGAAC 60.119 47.826 0.00 0.00 36.35 3.62
4480 4675 2.712539 CTGAGAGACGCGATCGCT 59.287 61.111 34.69 22.77 40.68 4.93
4489 4684 2.101575 GCGATCGCTCGGTACACA 59.898 61.111 31.94 0.00 45.15 3.72
4518 4713 4.095483 GGTATGCTCACCTTCAATGACAAG 59.905 45.833 0.52 0.00 35.55 3.16
4522 4717 4.756642 TGCTCACCTTCAATGACAAGTAAG 59.243 41.667 0.00 0.00 0.00 2.34
4523 4718 4.378874 GCTCACCTTCAATGACAAGTAAGC 60.379 45.833 0.00 0.00 0.00 3.09
4524 4719 4.973168 TCACCTTCAATGACAAGTAAGCT 58.027 39.130 0.00 0.00 0.00 3.74
4525 4720 4.997395 TCACCTTCAATGACAAGTAAGCTC 59.003 41.667 0.00 0.00 0.00 4.09
4526 4721 4.999950 CACCTTCAATGACAAGTAAGCTCT 59.000 41.667 0.00 0.00 0.00 4.09
4527 4722 4.999950 ACCTTCAATGACAAGTAAGCTCTG 59.000 41.667 0.00 0.00 0.00 3.35
4528 4723 4.142730 CCTTCAATGACAAGTAAGCTCTGC 60.143 45.833 0.00 0.00 0.00 4.26
4530 4725 4.388485 TCAATGACAAGTAAGCTCTGCAA 58.612 39.130 0.00 0.00 0.00 4.08
4531 4726 4.821260 TCAATGACAAGTAAGCTCTGCAAA 59.179 37.500 0.00 0.00 0.00 3.68
4532 4727 5.049198 TCAATGACAAGTAAGCTCTGCAAAG 60.049 40.000 0.00 0.00 0.00 2.77
4534 4729 3.181455 TGACAAGTAAGCTCTGCAAAGGA 60.181 43.478 0.00 0.00 0.00 3.36
4536 4731 3.565902 ACAAGTAAGCTCTGCAAAGGAAC 59.434 43.478 0.00 0.00 0.00 3.62
4537 4732 3.492102 AGTAAGCTCTGCAAAGGAACA 57.508 42.857 0.00 0.00 0.00 3.18
4541 4736 1.952296 AGCTCTGCAAAGGAACAACTG 59.048 47.619 0.00 0.00 0.00 3.16
4542 4737 1.678101 GCTCTGCAAAGGAACAACTGT 59.322 47.619 0.00 0.00 0.00 3.55
4543 4738 2.542411 GCTCTGCAAAGGAACAACTGTG 60.542 50.000 0.00 0.00 0.00 3.66
4628 4864 1.373435 GTGGGGATGTGGAACGTGA 59.627 57.895 0.00 0.00 42.39 4.35
4681 4917 4.913126 CAGTTCTACCTGCGGGTC 57.087 61.111 23.73 6.78 45.98 4.46
4735 4971 2.125106 ATCCCCAAGAACGCGCTC 60.125 61.111 5.73 2.65 0.00 5.03
4857 5093 7.254218 GCTCCAAATTCTTTTGACTGAAAACAG 60.254 37.037 0.19 0.00 44.11 3.16
4874 5110 2.949447 ACAGGCTTTGAGATGGTTTGT 58.051 42.857 0.00 0.00 0.00 2.83
4968 5204 3.402058 GCATCTTGCTTGCTCTTGTAG 57.598 47.619 0.00 0.00 40.96 2.74
5000 5236 9.369904 ACTGCAAAAATGCCTTATATTTAGTTG 57.630 29.630 0.00 0.00 0.00 3.16
5107 5344 5.049543 TGAATTAAACAAGCAAATTGCCAGC 60.050 36.000 15.04 0.00 46.52 4.85
5207 5450 6.152661 TGACTGAATTTCAACAACCTTTCTGT 59.847 34.615 0.01 0.00 0.00 3.41
5208 5451 6.935167 ACTGAATTTCAACAACCTTTCTGTT 58.065 32.000 0.01 0.00 37.49 3.16
5223 5466 2.477245 TCTGTTATGGCTTCCTGGCTA 58.523 47.619 0.00 0.00 42.34 3.93
5371 5614 8.902806 TGGATCCAACAATATTTATCAGTTGAC 58.097 33.333 13.46 7.49 41.41 3.18
5441 5684 0.250727 CAGTCGAATGGGGTGGTTGT 60.251 55.000 4.63 0.00 0.00 3.32
5489 5732 6.255020 ACATCGTTCATACAAGGACGAAATAC 59.745 38.462 1.27 0.00 46.00 1.89
5533 5776 7.614192 TCCTACATGAGACTGTATGTGAACTTA 59.386 37.037 0.00 0.00 37.98 2.24
5594 5875 5.163642 TGAGAAAGCCTACGATGAGAGTAAC 60.164 44.000 0.00 0.00 0.00 2.50
5611 5892 4.148825 CTGGCCCTCGGGTTCTCG 62.149 72.222 0.00 0.00 37.65 4.04
5676 5957 5.767816 TTTGGTAAAGAAGCAGAAAGGAC 57.232 39.130 0.00 0.00 36.82 3.85
5708 5990 2.356125 CCCCATAGGTGACCTTGAGTTG 60.356 54.545 10.53 0.41 34.61 3.16
5731 6013 1.886542 GAACCCACGAGAAAAAGGCAT 59.113 47.619 0.00 0.00 0.00 4.40
5743 6025 4.895297 AGAAAAAGGCATCCTTGAAGTCAA 59.105 37.500 0.00 0.00 43.92 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.033407 GCGTTGTATAGCTGTCTGCATG 60.033 50.000 0.00 0.00 45.94 4.06
1 2 2.205074 GCGTTGTATAGCTGTCTGCAT 58.795 47.619 0.00 0.00 45.94 3.96
3 4 0.572590 CGCGTTGTATAGCTGTCTGC 59.427 55.000 0.00 0.00 43.29 4.26
4 5 2.188837 TCGCGTTGTATAGCTGTCTG 57.811 50.000 5.77 0.00 0.00 3.51
6 7 2.727777 TGATCGCGTTGTATAGCTGTC 58.272 47.619 5.77 0.00 0.00 3.51
7 8 2.863401 TGATCGCGTTGTATAGCTGT 57.137 45.000 5.77 0.00 0.00 4.40
8 9 3.308530 TCATGATCGCGTTGTATAGCTG 58.691 45.455 5.77 0.00 0.00 4.24
9 10 3.643159 TCATGATCGCGTTGTATAGCT 57.357 42.857 5.77 0.00 0.00 3.32
10 11 3.422343 GCTTCATGATCGCGTTGTATAGC 60.422 47.826 5.77 5.05 0.00 2.97
11 12 3.735746 TGCTTCATGATCGCGTTGTATAG 59.264 43.478 5.77 0.00 0.00 1.31
12 13 3.712187 TGCTTCATGATCGCGTTGTATA 58.288 40.909 5.77 0.00 0.00 1.47
13 14 2.549926 TGCTTCATGATCGCGTTGTAT 58.450 42.857 5.77 0.00 0.00 2.29
14 15 2.003196 TGCTTCATGATCGCGTTGTA 57.997 45.000 5.77 0.00 0.00 2.41
15 16 1.063027 CATGCTTCATGATCGCGTTGT 59.937 47.619 5.77 0.00 43.81 3.32
16 17 1.063027 ACATGCTTCATGATCGCGTTG 59.937 47.619 5.77 11.71 43.81 4.10
17 18 1.372582 ACATGCTTCATGATCGCGTT 58.627 45.000 5.77 0.00 43.81 4.84
18 19 2.130395 CTACATGCTTCATGATCGCGT 58.870 47.619 5.77 9.04 43.81 6.01
19 20 2.397549 TCTACATGCTTCATGATCGCG 58.602 47.619 13.11 0.00 43.81 5.87
20 21 5.354054 AATTCTACATGCTTCATGATCGC 57.646 39.130 13.11 9.81 43.81 4.58
21 22 5.624081 GCAAATTCTACATGCTTCATGATCG 59.376 40.000 13.11 0.00 43.81 3.69
22 23 6.988109 GCAAATTCTACATGCTTCATGATC 57.012 37.500 13.11 0.00 43.81 2.92
31 32 4.098416 GTTTCCGAGCAAATTCTACATGC 58.902 43.478 0.00 0.00 40.34 4.06
32 33 5.295431 TGTTTCCGAGCAAATTCTACATG 57.705 39.130 0.00 0.00 0.00 3.21
33 34 5.957842 TTGTTTCCGAGCAAATTCTACAT 57.042 34.783 0.00 0.00 0.00 2.29
34 35 5.066634 TGTTTGTTTCCGAGCAAATTCTACA 59.933 36.000 0.00 0.00 38.09 2.74
35 36 5.516090 TGTTTGTTTCCGAGCAAATTCTAC 58.484 37.500 0.00 0.00 38.09 2.59
36 37 5.759506 TGTTTGTTTCCGAGCAAATTCTA 57.240 34.783 0.00 0.00 38.09 2.10
37 38 4.647424 TGTTTGTTTCCGAGCAAATTCT 57.353 36.364 0.00 0.00 38.09 2.40
38 39 5.905480 ATTGTTTGTTTCCGAGCAAATTC 57.095 34.783 0.00 0.00 38.09 2.17
39 40 5.584251 ACAATTGTTTGTTTCCGAGCAAATT 59.416 32.000 4.92 0.00 43.57 1.82
40 41 5.115480 ACAATTGTTTGTTTCCGAGCAAAT 58.885 33.333 4.92 0.00 43.57 2.32
41 42 4.499183 ACAATTGTTTGTTTCCGAGCAAA 58.501 34.783 4.92 0.00 43.57 3.68
42 43 4.109050 GACAATTGTTTGTTTCCGAGCAA 58.891 39.130 13.36 0.00 46.01 3.91
43 44 3.129462 TGACAATTGTTTGTTTCCGAGCA 59.871 39.130 13.36 0.00 46.01 4.26
44 45 3.701241 TGACAATTGTTTGTTTCCGAGC 58.299 40.909 13.36 0.00 46.01 5.03
45 46 6.582295 CCTTATGACAATTGTTTGTTTCCGAG 59.418 38.462 13.36 2.35 46.01 4.63
46 47 6.442952 CCTTATGACAATTGTTTGTTTCCGA 58.557 36.000 13.36 0.00 46.01 4.55
47 48 5.118510 GCCTTATGACAATTGTTTGTTTCCG 59.881 40.000 13.36 0.00 46.01 4.30
48 49 6.223120 AGCCTTATGACAATTGTTTGTTTCC 58.777 36.000 13.36 0.00 46.01 3.13
49 50 6.088085 CGAGCCTTATGACAATTGTTTGTTTC 59.912 38.462 13.36 0.00 46.01 2.78
50 51 5.920273 CGAGCCTTATGACAATTGTTTGTTT 59.080 36.000 13.36 0.00 46.01 2.83
51 52 5.009610 ACGAGCCTTATGACAATTGTTTGTT 59.990 36.000 13.36 0.99 46.01 2.83
53 54 5.046910 ACGAGCCTTATGACAATTGTTTG 57.953 39.130 13.36 0.50 38.86 2.93
54 55 6.205853 TGTTACGAGCCTTATGACAATTGTTT 59.794 34.615 13.36 6.39 0.00 2.83
55 56 5.703592 TGTTACGAGCCTTATGACAATTGTT 59.296 36.000 13.36 0.00 0.00 2.83
56 57 5.121768 GTGTTACGAGCCTTATGACAATTGT 59.878 40.000 11.78 11.78 0.00 2.71
57 58 5.121611 TGTGTTACGAGCCTTATGACAATTG 59.878 40.000 3.24 3.24 0.00 2.32
58 59 5.242434 TGTGTTACGAGCCTTATGACAATT 58.758 37.500 0.00 0.00 0.00 2.32
59 60 4.827692 TGTGTTACGAGCCTTATGACAAT 58.172 39.130 0.00 0.00 0.00 2.71
60 61 4.260139 TGTGTTACGAGCCTTATGACAA 57.740 40.909 0.00 0.00 0.00 3.18
61 62 3.945981 TGTGTTACGAGCCTTATGACA 57.054 42.857 0.00 0.00 0.00 3.58
62 63 4.091509 CAGTTGTGTTACGAGCCTTATGAC 59.908 45.833 0.00 0.00 0.00 3.06
63 64 4.242475 CAGTTGTGTTACGAGCCTTATGA 58.758 43.478 0.00 0.00 0.00 2.15
64 65 3.181520 GCAGTTGTGTTACGAGCCTTATG 60.182 47.826 0.00 0.00 0.00 1.90
65 66 3.000727 GCAGTTGTGTTACGAGCCTTAT 58.999 45.455 0.00 0.00 0.00 1.73
66 67 2.224090 TGCAGTTGTGTTACGAGCCTTA 60.224 45.455 0.00 0.00 0.00 2.69
67 68 1.226746 GCAGTTGTGTTACGAGCCTT 58.773 50.000 0.00 0.00 0.00 4.35
68 69 0.105964 TGCAGTTGTGTTACGAGCCT 59.894 50.000 0.00 0.00 0.00 4.58
69 70 1.135972 CATGCAGTTGTGTTACGAGCC 60.136 52.381 0.00 0.00 0.00 4.70
70 71 1.798223 TCATGCAGTTGTGTTACGAGC 59.202 47.619 0.00 0.00 0.00 5.03
71 72 3.241773 CGATCATGCAGTTGTGTTACGAG 60.242 47.826 0.00 0.00 0.00 4.18
72 73 2.666022 CGATCATGCAGTTGTGTTACGA 59.334 45.455 0.00 0.00 0.00 3.43
73 74 2.666022 TCGATCATGCAGTTGTGTTACG 59.334 45.455 0.00 0.00 0.00 3.18
74 75 3.431912 TGTCGATCATGCAGTTGTGTTAC 59.568 43.478 0.00 0.00 0.00 2.50
75 76 3.658709 TGTCGATCATGCAGTTGTGTTA 58.341 40.909 0.00 0.00 0.00 2.41
76 77 2.493035 TGTCGATCATGCAGTTGTGTT 58.507 42.857 0.00 0.00 0.00 3.32
77 78 2.168326 TGTCGATCATGCAGTTGTGT 57.832 45.000 0.00 0.00 0.00 3.72
78 79 3.047613 CATGTCGATCATGCAGTTGTG 57.952 47.619 12.77 0.00 45.69 3.33
87 88 5.415389 TCAACAAACCAATCATGTCGATCAT 59.585 36.000 0.00 0.00 37.22 2.45
88 89 4.759183 TCAACAAACCAATCATGTCGATCA 59.241 37.500 0.00 0.00 31.11 2.92
89 90 5.295431 TCAACAAACCAATCATGTCGATC 57.705 39.130 0.00 0.00 31.11 3.69
90 91 5.702865 CTTCAACAAACCAATCATGTCGAT 58.297 37.500 0.00 0.00 35.12 3.59
91 92 4.556501 GCTTCAACAAACCAATCATGTCGA 60.557 41.667 0.00 0.00 0.00 4.20
92 93 3.670055 GCTTCAACAAACCAATCATGTCG 59.330 43.478 0.00 0.00 0.00 4.35
93 94 4.874970 AGCTTCAACAAACCAATCATGTC 58.125 39.130 0.00 0.00 0.00 3.06
94 95 4.942761 AGCTTCAACAAACCAATCATGT 57.057 36.364 0.00 0.00 0.00 3.21
95 96 7.095523 CCTTTAAGCTTCAACAAACCAATCATG 60.096 37.037 0.00 0.00 0.00 3.07
96 97 6.930722 CCTTTAAGCTTCAACAAACCAATCAT 59.069 34.615 0.00 0.00 0.00 2.45
97 98 6.097554 TCCTTTAAGCTTCAACAAACCAATCA 59.902 34.615 0.00 0.00 0.00 2.57
98 99 6.420903 GTCCTTTAAGCTTCAACAAACCAATC 59.579 38.462 0.00 0.00 0.00 2.67
99 100 6.280643 GTCCTTTAAGCTTCAACAAACCAAT 58.719 36.000 0.00 0.00 0.00 3.16
100 101 5.394773 GGTCCTTTAAGCTTCAACAAACCAA 60.395 40.000 0.00 0.00 0.00 3.67
101 102 4.098807 GGTCCTTTAAGCTTCAACAAACCA 59.901 41.667 0.00 0.00 0.00 3.67
102 103 4.617959 GGTCCTTTAAGCTTCAACAAACC 58.382 43.478 0.00 1.50 0.00 3.27
103 104 4.287720 CGGTCCTTTAAGCTTCAACAAAC 58.712 43.478 0.00 0.00 0.00 2.93
104 105 3.243267 GCGGTCCTTTAAGCTTCAACAAA 60.243 43.478 0.00 0.00 0.00 2.83
105 106 2.292292 GCGGTCCTTTAAGCTTCAACAA 59.708 45.455 0.00 0.00 0.00 2.83
106 107 1.877443 GCGGTCCTTTAAGCTTCAACA 59.123 47.619 0.00 0.00 0.00 3.33
107 108 1.877443 TGCGGTCCTTTAAGCTTCAAC 59.123 47.619 0.00 0.00 0.00 3.18
108 109 2.264005 TGCGGTCCTTTAAGCTTCAA 57.736 45.000 0.00 0.00 0.00 2.69
109 110 1.877443 GTTGCGGTCCTTTAAGCTTCA 59.123 47.619 0.00 0.00 0.00 3.02
110 111 1.877443 TGTTGCGGTCCTTTAAGCTTC 59.123 47.619 0.00 0.00 0.00 3.86
111 112 1.975660 TGTTGCGGTCCTTTAAGCTT 58.024 45.000 3.48 3.48 0.00 3.74
112 113 2.200373 ATGTTGCGGTCCTTTAAGCT 57.800 45.000 0.00 0.00 0.00 3.74
113 114 3.297830 AAATGTTGCGGTCCTTTAAGC 57.702 42.857 0.00 0.00 0.00 3.09
114 115 4.142469 CCCTAAATGTTGCGGTCCTTTAAG 60.142 45.833 0.00 0.00 0.00 1.85
115 116 3.759618 CCCTAAATGTTGCGGTCCTTTAA 59.240 43.478 0.00 0.00 0.00 1.52
116 117 3.009253 TCCCTAAATGTTGCGGTCCTTTA 59.991 43.478 0.00 0.00 0.00 1.85
117 118 2.167662 CCCTAAATGTTGCGGTCCTTT 58.832 47.619 0.00 0.00 0.00 3.11
118 119 1.353022 TCCCTAAATGTTGCGGTCCTT 59.647 47.619 0.00 0.00 0.00 3.36
119 120 0.988832 TCCCTAAATGTTGCGGTCCT 59.011 50.000 0.00 0.00 0.00 3.85
120 121 1.471287 GTTCCCTAAATGTTGCGGTCC 59.529 52.381 0.00 0.00 0.00 4.46
121 122 1.129811 CGTTCCCTAAATGTTGCGGTC 59.870 52.381 0.00 0.00 0.00 4.79
122 123 1.161843 CGTTCCCTAAATGTTGCGGT 58.838 50.000 0.00 0.00 0.00 5.68
123 124 1.161843 ACGTTCCCTAAATGTTGCGG 58.838 50.000 0.00 0.00 33.11 5.69
124 125 2.723618 CGAACGTTCCCTAAATGTTGCG 60.724 50.000 22.07 2.81 45.11 4.85
125 126 2.224784 ACGAACGTTCCCTAAATGTTGC 59.775 45.455 22.07 0.00 45.11 4.17
126 127 3.495377 TGACGAACGTTCCCTAAATGTTG 59.505 43.478 22.07 6.81 45.11 3.33
128 129 3.062042 GTGACGAACGTTCCCTAAATGT 58.938 45.455 22.07 12.09 38.80 2.71
129 130 3.717350 GTGACGAACGTTCCCTAAATG 57.283 47.619 22.07 8.93 0.00 2.32
141 142 0.442699 GGCATCCTTTCGTGACGAAC 59.557 55.000 21.00 7.55 45.64 3.95
142 143 0.034198 TGGCATCCTTTCGTGACGAA 59.966 50.000 17.28 17.28 44.28 3.85
143 144 0.249120 ATGGCATCCTTTCGTGACGA 59.751 50.000 2.39 2.39 0.00 4.20
144 145 1.086696 AATGGCATCCTTTCGTGACG 58.913 50.000 0.00 0.00 0.00 4.35
145 146 2.867429 CAAATGGCATCCTTTCGTGAC 58.133 47.619 0.00 0.00 0.00 3.67
146 147 1.202114 GCAAATGGCATCCTTTCGTGA 59.798 47.619 0.00 0.00 43.97 4.35
147 148 1.632422 GCAAATGGCATCCTTTCGTG 58.368 50.000 0.00 0.00 43.97 4.35
148 149 0.171007 CGCAAATGGCATCCTTTCGT 59.829 50.000 0.00 0.00 45.17 3.85
149 150 0.451383 TCGCAAATGGCATCCTTTCG 59.549 50.000 0.00 0.00 45.17 3.46
150 151 2.262211 GTTCGCAAATGGCATCCTTTC 58.738 47.619 0.00 0.00 45.17 2.62
151 152 1.617850 TGTTCGCAAATGGCATCCTTT 59.382 42.857 0.00 0.00 45.17 3.11
152 153 1.255882 TGTTCGCAAATGGCATCCTT 58.744 45.000 0.00 0.00 45.17 3.36
153 154 1.477553 ATGTTCGCAAATGGCATCCT 58.522 45.000 0.00 0.00 45.17 3.24
154 155 2.298411 AATGTTCGCAAATGGCATCC 57.702 45.000 0.00 0.00 45.17 3.51
155 156 2.604462 GGAAATGTTCGCAAATGGCATC 59.396 45.455 0.00 0.00 45.17 3.91
156 157 2.234414 AGGAAATGTTCGCAAATGGCAT 59.766 40.909 0.00 0.00 45.17 4.40
157 158 1.617850 AGGAAATGTTCGCAAATGGCA 59.382 42.857 0.00 0.00 45.17 4.92
158 159 2.094545 AGAGGAAATGTTCGCAAATGGC 60.095 45.455 0.00 0.00 39.90 4.40
159 160 3.191162 TCAGAGGAAATGTTCGCAAATGG 59.809 43.478 0.00 0.00 0.00 3.16
160 161 4.161333 GTCAGAGGAAATGTTCGCAAATG 58.839 43.478 0.00 0.00 0.00 2.32
161 162 3.820467 TGTCAGAGGAAATGTTCGCAAAT 59.180 39.130 0.00 0.00 0.00 2.32
162 163 3.210227 TGTCAGAGGAAATGTTCGCAAA 58.790 40.909 0.00 0.00 0.00 3.68
163 164 2.807967 CTGTCAGAGGAAATGTTCGCAA 59.192 45.455 0.00 0.00 0.00 4.85
164 165 2.224281 ACTGTCAGAGGAAATGTTCGCA 60.224 45.455 6.91 0.00 0.00 5.10
165 166 2.417719 ACTGTCAGAGGAAATGTTCGC 58.582 47.619 6.91 0.00 0.00 4.70
166 167 4.511454 TGAAACTGTCAGAGGAAATGTTCG 59.489 41.667 6.91 0.00 0.00 3.95
179 180 5.511373 CCATCTCCTACAACTGAAACTGTCA 60.511 44.000 0.00 0.00 34.17 3.58
180 181 4.932200 CCATCTCCTACAACTGAAACTGTC 59.068 45.833 0.00 0.00 0.00 3.51
181 182 4.804261 GCCATCTCCTACAACTGAAACTGT 60.804 45.833 0.00 0.00 0.00 3.55
182 183 3.686726 GCCATCTCCTACAACTGAAACTG 59.313 47.826 0.00 0.00 0.00 3.16
183 184 3.327757 TGCCATCTCCTACAACTGAAACT 59.672 43.478 0.00 0.00 0.00 2.66
184 185 3.674997 TGCCATCTCCTACAACTGAAAC 58.325 45.455 0.00 0.00 0.00 2.78
185 186 4.574674 ATGCCATCTCCTACAACTGAAA 57.425 40.909 0.00 0.00 0.00 2.69
186 187 4.574674 AATGCCATCTCCTACAACTGAA 57.425 40.909 0.00 0.00 0.00 3.02
187 188 4.574674 AAATGCCATCTCCTACAACTGA 57.425 40.909 0.00 0.00 0.00 3.41
188 189 4.946157 AGAAAATGCCATCTCCTACAACTG 59.054 41.667 0.00 0.00 0.00 3.16
189 190 5.184892 AGAAAATGCCATCTCCTACAACT 57.815 39.130 0.00 0.00 0.00 3.16
190 191 5.415701 TGAAGAAAATGCCATCTCCTACAAC 59.584 40.000 0.00 0.00 0.00 3.32
191 192 5.569355 TGAAGAAAATGCCATCTCCTACAA 58.431 37.500 0.00 0.00 0.00 2.41
192 193 5.178096 TGAAGAAAATGCCATCTCCTACA 57.822 39.130 0.00 0.00 0.00 2.74
193 194 6.515272 TTTGAAGAAAATGCCATCTCCTAC 57.485 37.500 0.00 0.00 0.00 3.18
194 195 7.537596 TTTTTGAAGAAAATGCCATCTCCTA 57.462 32.000 0.00 0.00 31.07 2.94
195 196 6.423776 TTTTTGAAGAAAATGCCATCTCCT 57.576 33.333 0.00 0.00 31.07 3.69
215 216 7.011950 GGTAAGCCAAAAACTGTATTGCTTTTT 59.988 33.333 14.55 2.35 34.09 1.94
216 217 6.481976 GGTAAGCCAAAAACTGTATTGCTTTT 59.518 34.615 14.55 2.88 34.09 2.27
217 218 5.989168 GGTAAGCCAAAAACTGTATTGCTTT 59.011 36.000 14.55 8.51 34.09 3.51
218 219 5.069781 TGGTAAGCCAAAAACTGTATTGCTT 59.930 36.000 0.00 0.00 42.83 3.91
219 220 4.586841 TGGTAAGCCAAAAACTGTATTGCT 59.413 37.500 1.83 0.00 42.83 3.91
220 221 4.877282 TGGTAAGCCAAAAACTGTATTGC 58.123 39.130 1.83 0.00 42.83 3.56
234 235 5.177326 TCAAAATCATGCAAATGGTAAGCC 58.823 37.500 0.00 0.00 0.00 4.35
235 236 6.314400 ACATCAAAATCATGCAAATGGTAAGC 59.686 34.615 0.00 0.00 0.00 3.09
236 237 7.675403 GCACATCAAAATCATGCAAATGGTAAG 60.675 37.037 0.00 0.00 36.30 2.34
237 238 6.092396 GCACATCAAAATCATGCAAATGGTAA 59.908 34.615 0.00 0.00 36.30 2.85
238 239 5.581479 GCACATCAAAATCATGCAAATGGTA 59.419 36.000 0.00 0.00 36.30 3.25
239 240 4.393680 GCACATCAAAATCATGCAAATGGT 59.606 37.500 0.00 0.00 36.30 3.55
240 241 4.393371 TGCACATCAAAATCATGCAAATGG 59.607 37.500 0.00 0.00 43.00 3.16
241 242 5.447144 CCTGCACATCAAAATCATGCAAATG 60.447 40.000 0.00 0.00 45.08 2.32
242 243 4.634004 CCTGCACATCAAAATCATGCAAAT 59.366 37.500 0.00 0.00 45.08 2.32
243 244 3.997681 CCTGCACATCAAAATCATGCAAA 59.002 39.130 0.00 0.00 45.08 3.68
244 245 3.591023 CCTGCACATCAAAATCATGCAA 58.409 40.909 0.00 0.00 45.08 4.08
245 246 2.675603 GCCTGCACATCAAAATCATGCA 60.676 45.455 0.00 0.00 43.70 3.96
246 247 1.931172 GCCTGCACATCAAAATCATGC 59.069 47.619 0.00 0.00 36.81 4.06
247 248 2.190161 CGCCTGCACATCAAAATCATG 58.810 47.619 0.00 0.00 0.00 3.07
248 249 1.820519 ACGCCTGCACATCAAAATCAT 59.179 42.857 0.00 0.00 0.00 2.45
249 250 1.246649 ACGCCTGCACATCAAAATCA 58.753 45.000 0.00 0.00 0.00 2.57
250 251 2.253603 GAACGCCTGCACATCAAAATC 58.746 47.619 0.00 0.00 0.00 2.17
251 252 1.067635 GGAACGCCTGCACATCAAAAT 60.068 47.619 0.00 0.00 0.00 1.82
252 253 0.313672 GGAACGCCTGCACATCAAAA 59.686 50.000 0.00 0.00 0.00 2.44
253 254 1.523154 GGGAACGCCTGCACATCAAA 61.523 55.000 0.00 0.00 0.00 2.69
254 255 1.971167 GGGAACGCCTGCACATCAA 60.971 57.895 0.00 0.00 0.00 2.57
255 256 2.359850 GGGAACGCCTGCACATCA 60.360 61.111 0.00 0.00 0.00 3.07
256 257 1.675641 AAGGGAACGCCTGCACATC 60.676 57.895 0.00 0.00 0.00 3.06
257 258 1.973281 CAAGGGAACGCCTGCACAT 60.973 57.895 0.00 0.00 0.00 3.21
258 259 2.594303 CAAGGGAACGCCTGCACA 60.594 61.111 0.00 0.00 0.00 4.57
259 260 0.887387 TAACAAGGGAACGCCTGCAC 60.887 55.000 0.00 0.00 0.00 4.57
260 261 0.179015 TTAACAAGGGAACGCCTGCA 60.179 50.000 0.00 0.00 0.00 4.41
261 262 0.955905 TTTAACAAGGGAACGCCTGC 59.044 50.000 0.00 0.00 0.00 4.85
262 263 1.950909 TGTTTAACAAGGGAACGCCTG 59.049 47.619 0.00 0.00 0.00 4.85
263 264 2.227194 CTGTTTAACAAGGGAACGCCT 58.773 47.619 0.00 0.00 0.00 5.52
264 265 1.268625 CCTGTTTAACAAGGGAACGCC 59.731 52.381 0.00 0.00 0.00 5.68
265 266 1.335597 GCCTGTTTAACAAGGGAACGC 60.336 52.381 7.45 0.00 0.00 4.84
266 267 1.950909 TGCCTGTTTAACAAGGGAACG 59.049 47.619 7.45 0.00 0.00 3.95
267 268 3.365969 CGATGCCTGTTTAACAAGGGAAC 60.366 47.826 7.45 6.47 0.00 3.62
268 269 2.817258 CGATGCCTGTTTAACAAGGGAA 59.183 45.455 7.45 0.00 0.00 3.97
269 270 2.432444 CGATGCCTGTTTAACAAGGGA 58.568 47.619 7.45 8.45 0.00 4.20
272 273 2.262572 GGCGATGCCTGTTTAACAAG 57.737 50.000 0.00 0.00 46.69 3.16
425 428 5.452356 CCATGAATCAAGGGATAAAGTTGGC 60.452 44.000 0.00 0.00 32.09 4.52
545 551 3.197790 CGATGGCCTGCTTCACGG 61.198 66.667 3.32 0.00 0.00 4.94
546 552 2.434884 ACGATGGCCTGCTTCACG 60.435 61.111 3.32 1.88 0.00 4.35
547 553 3.044059 GCACGATGGCCTGCTTCAC 62.044 63.158 3.32 0.00 0.00 3.18
548 554 2.747460 GCACGATGGCCTGCTTCA 60.747 61.111 3.32 0.00 0.00 3.02
579 585 2.361610 ATTTGAGGCAGGGCGGTG 60.362 61.111 0.00 0.00 0.00 4.94
604 625 4.057428 GAGACGGTGGTGCTCGCT 62.057 66.667 0.00 0.00 0.00 4.93
605 626 3.973267 GAGAGACGGTGGTGCTCGC 62.973 68.421 0.00 0.00 33.98 5.03
607 628 1.335496 GATAGAGAGACGGTGGTGCTC 59.665 57.143 0.00 0.00 0.00 4.26
608 629 1.064314 AGATAGAGAGACGGTGGTGCT 60.064 52.381 0.00 0.00 0.00 4.40
609 630 1.335496 GAGATAGAGAGACGGTGGTGC 59.665 57.143 0.00 0.00 0.00 5.01
611 632 2.775384 AGAGAGATAGAGAGACGGTGGT 59.225 50.000 0.00 0.00 0.00 4.16
612 633 3.399330 GAGAGAGATAGAGAGACGGTGG 58.601 54.545 0.00 0.00 0.00 4.61
613 634 3.071023 AGGAGAGAGATAGAGAGACGGTG 59.929 52.174 0.00 0.00 0.00 4.94
614 635 3.314693 AGGAGAGAGATAGAGAGACGGT 58.685 50.000 0.00 0.00 0.00 4.83
615 636 3.306780 GGAGGAGAGAGATAGAGAGACGG 60.307 56.522 0.00 0.00 0.00 4.79
617 638 3.926616 CGGAGGAGAGAGATAGAGAGAC 58.073 54.545 0.00 0.00 0.00 3.36
656 678 2.752807 GCTAGATTTGGGGCCGGGA 61.753 63.158 2.18 0.00 0.00 5.14
665 687 1.518929 GTACGCGCTCTGCTAGATTTG 59.481 52.381 5.73 0.00 43.27 2.32
672 694 4.477975 GGACGTACGCGCTCTGCT 62.478 66.667 16.72 0.00 43.27 4.24
692 714 4.148825 GGGAGGATGCGTGCGTCT 62.149 66.667 13.31 0.60 32.85 4.18
714 736 3.512516 GATTGGCTGGCTGGACGC 61.513 66.667 2.00 0.00 38.13 5.19
715 737 3.197790 CGATTGGCTGGCTGGACG 61.198 66.667 2.00 0.00 0.00 4.79
717 739 4.802051 GGCGATTGGCTGGCTGGA 62.802 66.667 2.00 0.00 42.94 3.86
719 741 2.831742 ATGGCGATTGGCTGGCTG 60.832 61.111 8.17 0.00 42.94 4.85
721 743 2.829914 TGATGGCGATTGGCTGGC 60.830 61.111 8.17 0.00 42.94 4.85
723 745 1.725665 CAGTGATGGCGATTGGCTG 59.274 57.895 8.17 0.00 42.94 4.85
725 747 2.410469 GCAGTGATGGCGATTGGC 59.590 61.111 0.00 0.00 42.51 4.52
726 748 2.484062 GGGCAGTGATGGCGATTGG 61.484 63.158 0.00 0.00 34.95 3.16
728 750 2.124151 GGGGCAGTGATGGCGATT 60.124 61.111 0.00 0.00 34.95 3.34
729 751 4.552365 CGGGGCAGTGATGGCGAT 62.552 66.667 0.00 0.00 34.95 4.58
793 815 4.899239 GTCGATCTGGCTGGGCGG 62.899 72.222 0.00 0.00 0.00 6.13
812 834 1.281925 TGGCAGGGAGGAAAGGGATC 61.282 60.000 0.00 0.00 0.00 3.36
886 919 1.554160 CTGAGCAAGGGAGTGATGAGT 59.446 52.381 0.00 0.00 0.00 3.41
890 923 1.202330 CCTCTGAGCAAGGGAGTGAT 58.798 55.000 0.00 0.00 0.00 3.06
903 936 2.757508 CGCCTCCTCAGCCTCTGA 60.758 66.667 0.00 0.00 38.25 3.27
904 937 2.757508 TCGCCTCCTCAGCCTCTG 60.758 66.667 0.00 0.00 0.00 3.35
910 943 3.535962 GCTCCCTCGCCTCCTCAG 61.536 72.222 0.00 0.00 0.00 3.35
911 944 4.382541 TGCTCCCTCGCCTCCTCA 62.383 66.667 0.00 0.00 0.00 3.86
912 945 3.844090 GTGCTCCCTCGCCTCCTC 61.844 72.222 0.00 0.00 0.00 3.71
914 947 4.154347 CAGTGCTCCCTCGCCTCC 62.154 72.222 0.00 0.00 0.00 4.30
915 948 2.052690 TACAGTGCTCCCTCGCCTC 61.053 63.158 0.00 0.00 0.00 4.70
916 949 2.037367 TACAGTGCTCCCTCGCCT 59.963 61.111 0.00 0.00 0.00 5.52
917 950 2.184579 GTACAGTGCTCCCTCGCC 59.815 66.667 0.00 0.00 0.00 5.54
919 952 1.592400 TTCGGTACAGTGCTCCCTCG 61.592 60.000 0.00 0.00 0.00 4.63
921 954 1.258445 CCTTCGGTACAGTGCTCCCT 61.258 60.000 0.00 0.00 0.00 4.20
922 955 1.218316 CCTTCGGTACAGTGCTCCC 59.782 63.158 0.00 0.00 0.00 4.30
923 956 0.389948 CACCTTCGGTACAGTGCTCC 60.390 60.000 0.00 0.00 32.11 4.70
924 957 0.317479 ACACCTTCGGTACAGTGCTC 59.683 55.000 0.00 0.00 32.11 4.26
925 958 0.317479 GACACCTTCGGTACAGTGCT 59.683 55.000 0.00 0.00 32.11 4.40
926 959 1.007336 CGACACCTTCGGTACAGTGC 61.007 60.000 0.00 0.00 44.60 4.40
927 960 3.102515 CGACACCTTCGGTACAGTG 57.897 57.895 0.00 0.00 44.60 3.66
952 985 3.670377 GCAAACTCCCACCACCGC 61.670 66.667 0.00 0.00 0.00 5.68
960 993 2.051345 CAACACGCGCAAACTCCC 60.051 61.111 5.73 0.00 0.00 4.30
982 1015 0.032615 ATCTCCGCTTCCAGTCTCCT 60.033 55.000 0.00 0.00 0.00 3.69
987 1020 2.586792 GGCATCTCCGCTTCCAGT 59.413 61.111 0.00 0.00 0.00 4.00
1030 1063 2.520741 GAGGAGGGCGAGGAGGAG 60.521 72.222 0.00 0.00 0.00 3.69
1152 1185 5.836347 AGAAAGAAAAAGAAGAAGCGCAAT 58.164 33.333 11.47 0.00 0.00 3.56
1153 1186 5.248870 AGAAAGAAAAAGAAGAAGCGCAA 57.751 34.783 11.47 0.00 0.00 4.85
1154 1187 4.900635 AGAAAGAAAAAGAAGAAGCGCA 57.099 36.364 11.47 0.00 0.00 6.09
1155 1188 5.515184 AGAAGAAAGAAAAAGAAGAAGCGC 58.485 37.500 0.00 0.00 0.00 5.92
1156 1189 6.634837 GGAAGAAGAAAGAAAAAGAAGAAGCG 59.365 38.462 0.00 0.00 0.00 4.68
1160 1231 6.830838 AGCAGGAAGAAGAAAGAAAAAGAAGA 59.169 34.615 0.00 0.00 0.00 2.87
1162 1233 6.830838 AGAGCAGGAAGAAGAAAGAAAAAGAA 59.169 34.615 0.00 0.00 0.00 2.52
1167 1238 5.041191 ACAGAGCAGGAAGAAGAAAGAAA 57.959 39.130 0.00 0.00 0.00 2.52
1181 1252 0.035881 TCAGCCCAAGAACAGAGCAG 59.964 55.000 0.00 0.00 0.00 4.24
1313 1397 1.383803 CCAGGAGAGGAGGAAGGGG 60.384 68.421 0.00 0.00 0.00 4.79
1316 1400 6.239743 GGAATAATTACCAGGAGAGGAGGAAG 60.240 46.154 0.00 0.00 0.00 3.46
1339 1423 6.875195 GCAGGAAGAAAATGAAAATTGATGGA 59.125 34.615 0.00 0.00 0.00 3.41
1340 1424 6.093082 GGCAGGAAGAAAATGAAAATTGATGG 59.907 38.462 0.00 0.00 0.00 3.51
1344 1428 4.389687 CGGGCAGGAAGAAAATGAAAATTG 59.610 41.667 0.00 0.00 0.00 2.32
1345 1429 4.040339 ACGGGCAGGAAGAAAATGAAAATT 59.960 37.500 0.00 0.00 0.00 1.82
1346 1430 3.578282 ACGGGCAGGAAGAAAATGAAAAT 59.422 39.130 0.00 0.00 0.00 1.82
1350 1434 2.706890 GTACGGGCAGGAAGAAAATGA 58.293 47.619 0.00 0.00 0.00 2.57
1352 1436 1.002773 ACGTACGGGCAGGAAGAAAAT 59.997 47.619 21.06 0.00 0.00 1.82
1355 1439 0.393820 AAACGTACGGGCAGGAAGAA 59.606 50.000 21.06 0.00 0.00 2.52
1357 1441 1.017701 GGAAACGTACGGGCAGGAAG 61.018 60.000 21.06 0.00 0.00 3.46
1358 1442 1.004679 GGAAACGTACGGGCAGGAA 60.005 57.895 21.06 0.00 0.00 3.36
1360 1444 2.030958 GTGGAAACGTACGGGCAGG 61.031 63.158 21.06 0.00 0.00 4.85
1382 1479 2.426023 GGAGAGGCACCAACACGT 59.574 61.111 0.00 0.00 0.00 4.49
1411 1508 1.537202 GCCGAGCTTGAAATGAACAGT 59.463 47.619 1.22 0.00 0.00 3.55
1441 1538 1.504446 GCAGCGTCGAGAGAGAACT 59.496 57.895 0.00 0.00 43.49 3.01
1442 1539 1.865622 CGCAGCGTCGAGAGAGAAC 60.866 63.158 6.65 0.00 43.49 3.01
1443 1540 1.853114 AACGCAGCGTCGAGAGAGAA 61.853 55.000 23.22 0.00 43.49 2.87
1452 1549 3.782244 CAGCAGGAACGCAGCGTC 61.782 66.667 23.22 14.42 39.99 5.19
1487 1584 6.284459 AGAAGTTAGATAAGCTCGGAAATGG 58.716 40.000 0.00 0.00 0.00 3.16
2042 2139 6.495181 TGTGAATAAAGAAAGGCATTTACCCA 59.505 34.615 0.00 0.00 0.00 4.51
2079 2176 4.120331 GCCCCAGCAACGATGTGC 62.120 66.667 0.00 0.00 45.28 4.57
2090 2187 0.040204 AACCAATTCCTCTGCCCCAG 59.960 55.000 0.00 0.00 0.00 4.45
2095 2192 1.909700 TGGACAACCAATTCCTCTGC 58.090 50.000 0.00 0.00 43.91 4.26
2106 2203 5.863397 CACATATGTTCACATTTGGACAACC 59.137 40.000 5.37 0.00 44.86 3.77
2107 2204 5.345741 GCACATATGTTCACATTTGGACAAC 59.654 40.000 5.37 0.00 44.86 3.32
2110 2207 5.058149 TGCACATATGTTCACATTTGGAC 57.942 39.130 5.37 6.63 38.87 4.02
2128 2225 3.193267 TGGAAGTTGGCATATTCTTGCAC 59.807 43.478 10.78 0.00 44.59 4.57
2129 2226 3.429492 TGGAAGTTGGCATATTCTTGCA 58.571 40.909 10.78 10.58 44.59 4.08
2131 2228 5.183713 TGTCTTGGAAGTTGGCATATTCTTG 59.816 40.000 10.78 3.98 0.00 3.02
2139 2236 2.229792 GTGATGTCTTGGAAGTTGGCA 58.770 47.619 0.00 0.00 0.00 4.92
2143 2240 2.158623 TGCAGGTGATGTCTTGGAAGTT 60.159 45.455 0.00 0.00 0.00 2.66
2147 2244 1.059098 ACTGCAGGTGATGTCTTGGA 58.941 50.000 19.93 0.00 0.00 3.53
2151 2248 4.457952 ACTTGCACTGCAGGTGATGTCT 62.458 50.000 19.93 0.00 46.65 3.41
2204 2322 6.515272 AAATGGAGATTTACACATGTGTCC 57.485 37.500 33.72 25.87 43.74 4.02
2294 2417 1.068895 CTGACATTTGTTTGCCTGCCA 59.931 47.619 0.00 0.00 0.00 4.92
2313 2436 5.897824 TCCGGTCTAGAGATAAACAAATCCT 59.102 40.000 0.00 0.00 0.00 3.24
2325 2448 2.509569 GCATCAGATCCGGTCTAGAGA 58.490 52.381 0.00 0.00 34.69 3.10
2398 2522 0.668535 AGCACGGCCAAAAGAAGTTC 59.331 50.000 2.24 0.00 0.00 3.01
2466 2590 2.501723 AGGCCCACTGATACTAGTTGTG 59.498 50.000 0.00 5.92 0.00 3.33
2467 2591 2.834113 AGGCCCACTGATACTAGTTGT 58.166 47.619 0.00 0.00 0.00 3.32
2473 2597 2.111384 CACACTAGGCCCACTGATACT 58.889 52.381 0.00 0.00 0.00 2.12
2579 2703 4.746535 TCCTTCACGATAATAAGGCACA 57.253 40.909 0.00 0.00 39.74 4.57
2583 2740 5.878116 TGTGGTTTCCTTCACGATAATAAGG 59.122 40.000 0.00 0.00 41.00 2.69
2584 2741 6.978343 TGTGGTTTCCTTCACGATAATAAG 57.022 37.500 0.00 0.00 36.74 1.73
2588 2745 7.225931 GCTATAATGTGGTTTCCTTCACGATAA 59.774 37.037 0.00 0.00 36.74 1.75
2592 2749 4.035208 GGCTATAATGTGGTTTCCTTCACG 59.965 45.833 0.00 0.00 36.74 4.35
2611 2768 7.829211 GGCAGAACCATATCTAATTTATGGCTA 59.171 37.037 12.66 0.00 46.74 3.93
2648 2805 9.095065 GAACGAACTACATACCTGTTTCATATT 57.905 33.333 0.00 0.00 36.79 1.28
2651 2808 6.698380 AGAACGAACTACATACCTGTTTCAT 58.302 36.000 0.00 0.00 36.79 2.57
2652 2809 6.092955 AGAACGAACTACATACCTGTTTCA 57.907 37.500 0.00 0.00 36.79 2.69
2653 2810 5.285607 CGAGAACGAACTACATACCTGTTTC 59.714 44.000 0.00 0.00 42.66 2.78
2654 2811 5.048504 TCGAGAACGAACTACATACCTGTTT 60.049 40.000 0.00 0.00 45.74 2.83
2657 2814 4.611310 TCGAGAACGAACTACATACCTG 57.389 45.455 0.00 0.00 45.74 4.00
2681 2838 7.409697 ACGTCATATATGAACTACGTACGTTT 58.590 34.615 27.92 15.94 38.75 3.60
2683 2840 6.530913 ACGTCATATATGAACTACGTACGT 57.469 37.500 25.98 25.98 38.75 3.57
2684 2841 7.724205 ACTACGTCATATATGAACTACGTACG 58.276 38.462 23.19 15.01 38.75 3.67
2700 2857 9.538508 AACTAGTTGTTTCTTTAACTACGTCAT 57.461 29.630 7.48 0.00 44.06 3.06
2701 2858 8.931385 AACTAGTTGTTTCTTTAACTACGTCA 57.069 30.769 7.48 0.00 44.06 4.35
2715 2872 9.174166 ACAGATAACACTGAAAACTAGTTGTTT 57.826 29.630 9.34 0.00 43.65 2.83
2716 2873 8.732746 ACAGATAACACTGAAAACTAGTTGTT 57.267 30.769 9.34 10.89 40.63 2.83
2717 2874 7.985184 TGACAGATAACACTGAAAACTAGTTGT 59.015 33.333 9.34 2.64 40.63 3.32
2718 2875 8.365399 TGACAGATAACACTGAAAACTAGTTG 57.635 34.615 9.34 0.00 40.63 3.16
2719 2876 7.171678 GCTGACAGATAACACTGAAAACTAGTT 59.828 37.037 6.65 1.12 40.63 2.24
2720 2877 6.647067 GCTGACAGATAACACTGAAAACTAGT 59.353 38.462 6.65 0.00 40.63 2.57
2721 2878 6.870965 AGCTGACAGATAACACTGAAAACTAG 59.129 38.462 6.65 0.00 40.63 2.57
2722 2879 6.759272 AGCTGACAGATAACACTGAAAACTA 58.241 36.000 6.65 0.00 40.63 2.24
2723 2880 5.615289 AGCTGACAGATAACACTGAAAACT 58.385 37.500 6.65 0.00 40.63 2.66
2724 2881 5.931441 AGCTGACAGATAACACTGAAAAC 57.069 39.130 6.65 0.00 40.63 2.43
2725 2882 6.426937 GGTTAGCTGACAGATAACACTGAAAA 59.573 38.462 33.08 4.61 45.90 2.29
2726 2883 5.932303 GGTTAGCTGACAGATAACACTGAAA 59.068 40.000 33.08 5.26 45.90 2.69
2727 2884 5.011635 TGGTTAGCTGACAGATAACACTGAA 59.988 40.000 33.08 16.98 45.90 3.02
2728 2885 4.526650 TGGTTAGCTGACAGATAACACTGA 59.473 41.667 33.08 17.72 45.90 3.41
2729 2886 4.820897 TGGTTAGCTGACAGATAACACTG 58.179 43.478 33.08 0.00 45.90 3.66
2730 2887 5.683876 ATGGTTAGCTGACAGATAACACT 57.316 39.130 33.08 21.70 45.90 3.55
2731 2888 6.477033 CAGTATGGTTAGCTGACAGATAACAC 59.523 42.308 33.08 25.35 45.90 3.32
2732 2889 6.379988 TCAGTATGGTTAGCTGACAGATAACA 59.620 38.462 33.08 23.29 45.90 2.41
2733 2890 6.806751 TCAGTATGGTTAGCTGACAGATAAC 58.193 40.000 27.75 27.75 44.02 1.89
2734 2891 7.418337 TTCAGTATGGTTAGCTGACAGATAA 57.582 36.000 9.07 9.07 38.76 1.75
2735 2892 7.603180 ATTCAGTATGGTTAGCTGACAGATA 57.397 36.000 11.15 0.22 38.76 1.98
2736 2893 5.939764 TTCAGTATGGTTAGCTGACAGAT 57.060 39.130 11.15 1.49 38.76 2.90
2737 2894 5.939764 ATTCAGTATGGTTAGCTGACAGA 57.060 39.130 11.15 0.00 38.76 3.41
2738 2895 6.992063 AAATTCAGTATGGTTAGCTGACAG 57.008 37.500 11.15 0.00 38.76 3.51
2739 2896 8.726988 GTTAAAATTCAGTATGGTTAGCTGACA 58.273 33.333 11.15 0.00 38.76 3.58
2740 2897 8.947115 AGTTAAAATTCAGTATGGTTAGCTGAC 58.053 33.333 0.00 0.00 38.76 3.51
2741 2898 8.946085 CAGTTAAAATTCAGTATGGTTAGCTGA 58.054 33.333 0.00 0.00 33.90 4.26
2742 2899 7.698130 GCAGTTAAAATTCAGTATGGTTAGCTG 59.302 37.037 0.00 0.00 34.47 4.24
2781 2938 6.089954 GCAAAATGGCTTCAAGATCAAGTAAC 59.910 38.462 0.00 0.00 0.00 2.50
2788 2945 2.919229 CGTGCAAAATGGCTTCAAGATC 59.081 45.455 0.00 0.00 34.04 2.75
2795 2952 1.323412 TACACCGTGCAAAATGGCTT 58.677 45.000 0.00 0.00 38.72 4.35
2797 2954 1.627879 CATACACCGTGCAAAATGGC 58.372 50.000 0.00 0.00 38.72 4.40
2799 2956 1.067985 TGCCATACACCGTGCAAAATG 60.068 47.619 0.00 0.00 0.00 2.32
2800 2957 1.202114 CTGCCATACACCGTGCAAAAT 59.798 47.619 0.00 0.00 32.58 1.82
2802 2959 0.250510 TCTGCCATACACCGTGCAAA 60.251 50.000 0.00 0.00 32.58 3.68
2803 2960 0.035534 ATCTGCCATACACCGTGCAA 60.036 50.000 0.00 0.00 32.58 4.08
2804 2961 0.744057 CATCTGCCATACACCGTGCA 60.744 55.000 0.00 0.00 0.00 4.57
2809 2966 4.398988 TGAATTTGACATCTGCCATACACC 59.601 41.667 0.00 0.00 0.00 4.16
2810 2967 5.565592 TGAATTTGACATCTGCCATACAC 57.434 39.130 0.00 0.00 0.00 2.90
2817 2974 4.247258 TGGCATTTGAATTTGACATCTGC 58.753 39.130 0.00 0.00 0.00 4.26
2819 2976 6.105397 ACTTGGCATTTGAATTTGACATCT 57.895 33.333 0.00 0.00 29.20 2.90
2853 3016 6.204688 TCAGACAAGAAGCGATATTGTTTTGT 59.795 34.615 5.76 0.00 43.25 2.83
2864 3027 0.387929 AACCGTCAGACAAGAAGCGA 59.612 50.000 0.41 0.00 0.00 4.93
2890 3054 3.119319 TGAATCCCCTGCCTACAATGTA 58.881 45.455 0.00 0.00 0.00 2.29
2891 3055 1.922447 TGAATCCCCTGCCTACAATGT 59.078 47.619 0.00 0.00 0.00 2.71
2892 3056 2.579873 CTGAATCCCCTGCCTACAATG 58.420 52.381 0.00 0.00 0.00 2.82
2893 3057 1.133668 GCTGAATCCCCTGCCTACAAT 60.134 52.381 0.00 0.00 0.00 2.71
2894 3058 0.255890 GCTGAATCCCCTGCCTACAA 59.744 55.000 0.00 0.00 0.00 2.41
2895 3059 0.913934 TGCTGAATCCCCTGCCTACA 60.914 55.000 0.00 0.00 0.00 2.74
2896 3060 0.179034 CTGCTGAATCCCCTGCCTAC 60.179 60.000 0.00 0.00 0.00 3.18
2897 3061 0.326522 TCTGCTGAATCCCCTGCCTA 60.327 55.000 0.00 0.00 0.00 3.93
3068 3232 1.227674 GCTAAGGACCCTGATGCCG 60.228 63.158 0.00 0.00 0.00 5.69
3101 3265 3.858225 GGGGGATCGAACGGGACC 61.858 72.222 0.00 0.00 0.00 4.46
3104 3268 4.547367 GCAGGGGGATCGAACGGG 62.547 72.222 0.00 0.00 0.00 5.28
3137 3301 0.478072 TGAACCAGTCACCAGCCAAT 59.522 50.000 0.00 0.00 0.00 3.16
3179 3343 9.793252 GATACATCAAAAACATAAGCAGAACAT 57.207 29.630 0.00 0.00 0.00 2.71
3180 3344 8.791675 TGATACATCAAAAACATAAGCAGAACA 58.208 29.630 0.00 0.00 33.08 3.18
3181 3345 9.624697 TTGATACATCAAAAACATAAGCAGAAC 57.375 29.630 2.15 0.00 43.26 3.01
3199 3363 5.058149 TGAAATGTTGCGCTTTGATACAT 57.942 34.783 9.73 6.03 0.00 2.29
3202 3366 3.755905 TCCTGAAATGTTGCGCTTTGATA 59.244 39.130 9.73 0.00 0.00 2.15
3206 3370 3.451141 TTTCCTGAAATGTTGCGCTTT 57.549 38.095 9.73 0.00 0.00 3.51
3210 3374 7.579589 TCAATTATTTTCCTGAAATGTTGCG 57.420 32.000 0.00 0.00 38.40 4.85
3222 3386 9.541143 TTCAGTTCAGGTTTTCAATTATTTTCC 57.459 29.630 0.00 0.00 0.00 3.13
3228 3399 8.744652 TCAAGTTTCAGTTCAGGTTTTCAATTA 58.255 29.630 0.00 0.00 0.00 1.40
3232 3403 6.582677 TTCAAGTTTCAGTTCAGGTTTTCA 57.417 33.333 0.00 0.00 0.00 2.69
3234 3405 6.993079 AGTTTCAAGTTTCAGTTCAGGTTTT 58.007 32.000 0.00 0.00 0.00 2.43
3252 3423 4.279169 CCTTTCAAATCCTGCAGAGTTTCA 59.721 41.667 17.39 0.00 28.05 2.69
3259 3430 3.604875 AATGCCTTTCAAATCCTGCAG 57.395 42.857 6.78 6.78 31.53 4.41
3280 3451 3.993382 GGTCGTTACCACTGTCCAA 57.007 52.632 0.00 0.00 45.98 3.53
3381 3552 5.512753 TTTTTGACATCTGCTTTGCTACA 57.487 34.783 0.00 0.00 0.00 2.74
3397 3568 8.621532 ATGAAGTACTTGTCAGCTATTTTTGA 57.378 30.769 14.14 0.00 0.00 2.69
3423 3594 4.142790 ACTCTGTCTCTGTCTACCGAAAA 58.857 43.478 0.00 0.00 0.00 2.29
3427 3598 2.814919 ACAACTCTGTCTCTGTCTACCG 59.185 50.000 0.00 0.00 0.00 4.02
3460 3631 3.797039 TCCCTGCGAAAGATTACATCAG 58.203 45.455 0.00 0.00 0.00 2.90
3462 3633 5.106317 TGTTTTCCCTGCGAAAGATTACATC 60.106 40.000 0.00 0.00 41.47 3.06
3470 3641 3.374058 ACGATATGTTTTCCCTGCGAAAG 59.626 43.478 0.00 0.00 41.47 2.62
3510 3681 0.174845 TAACCGAGGTTGAGATGCCG 59.825 55.000 17.08 0.00 38.92 5.69
3519 3690 4.472108 TGGATCCTTATGTTAACCGAGGTT 59.528 41.667 14.23 12.54 41.65 3.50
3528 3699 2.782922 TGGCCCTGGATCCTTATGTTA 58.217 47.619 14.23 0.00 0.00 2.41
3603 3774 2.950877 GAGGTGAACATCGAGCGAG 58.049 57.895 0.00 0.00 0.00 5.03
3612 3783 2.741092 GACTGGCCGAGGTGAACA 59.259 61.111 0.00 0.00 0.00 3.18
3615 3786 1.681327 GTAGGACTGGCCGAGGTGA 60.681 63.158 0.00 0.00 43.43 4.02
3621 3792 0.105039 GGAATGAGTAGGACTGGCCG 59.895 60.000 0.00 0.00 43.43 6.13
3636 3807 0.037605 GGTTGGTCGTCACGAGGAAT 60.038 55.000 0.00 0.00 36.23 3.01
3649 3820 3.902112 CTGGGGTGGCTGGTTGGT 61.902 66.667 0.00 0.00 0.00 3.67
3652 3823 2.706341 TAGTCCTGGGGTGGCTGGTT 62.706 60.000 0.00 0.00 0.00 3.67
3777 3948 3.270335 GATCTCGATCGTCGGCCCC 62.270 68.421 15.94 0.00 40.88 5.80
3816 3987 4.081862 TCACGTTCTTACCGGATTGATCTT 60.082 41.667 9.46 0.00 0.00 2.40
3834 4005 6.315393 ACTTCAGTTTTTACAGTCATTCACGT 59.685 34.615 0.00 0.00 0.00 4.49
3835 4006 6.715464 ACTTCAGTTTTTACAGTCATTCACG 58.285 36.000 0.00 0.00 0.00 4.35
3836 4007 7.640240 GTGACTTCAGTTTTTACAGTCATTCAC 59.360 37.037 3.77 0.00 44.26 3.18
3893 4064 2.001812 AGCAGCATACGTGACTTCAG 57.998 50.000 0.00 0.00 0.00 3.02
3894 4065 2.492088 AGTAGCAGCATACGTGACTTCA 59.508 45.455 0.00 0.00 0.00 3.02
3895 4066 3.109619 GAGTAGCAGCATACGTGACTTC 58.890 50.000 0.00 0.00 0.00 3.01
3896 4067 2.755655 AGAGTAGCAGCATACGTGACTT 59.244 45.455 0.00 0.00 0.00 3.01
3897 4068 2.098280 CAGAGTAGCAGCATACGTGACT 59.902 50.000 0.00 0.00 0.00 3.41
3898 4069 2.097629 TCAGAGTAGCAGCATACGTGAC 59.902 50.000 0.00 0.00 0.00 3.67
3899 4070 2.365582 TCAGAGTAGCAGCATACGTGA 58.634 47.619 0.00 1.47 0.00 4.35
3900 4071 2.851805 TCAGAGTAGCAGCATACGTG 57.148 50.000 0.00 0.00 0.00 4.49
3903 4080 4.744137 CAGTCATTCAGAGTAGCAGCATAC 59.256 45.833 0.00 0.00 0.00 2.39
3931 4108 2.027745 ACCTGCGTTCATCATTCAGAGT 60.028 45.455 0.00 0.00 0.00 3.24
4020 4197 1.158484 CGAGCCTCATCGTCCTCGTA 61.158 60.000 0.00 0.00 41.47 3.43
4055 4232 1.136147 CTCAGCTTGCCGTTGATGC 59.864 57.895 0.00 0.00 32.16 3.91
4107 4284 2.847234 ACCTTGAGCGGGGTGTCA 60.847 61.111 0.00 0.00 34.16 3.58
4263 4440 3.695606 GACTGCACGGAGCCCTCA 61.696 66.667 0.00 0.00 44.83 3.86
4353 4530 2.038295 CCTAGGAGACAAGCCCATGATC 59.962 54.545 1.05 0.00 0.00 2.92
4367 4544 4.501571 CCATACAAATCGGTGTCCTAGGAG 60.502 50.000 13.15 0.00 32.75 3.69
4369 4546 3.728845 CCATACAAATCGGTGTCCTAGG 58.271 50.000 0.82 0.82 32.75 3.02
4370 4547 3.131396 GCCATACAAATCGGTGTCCTAG 58.869 50.000 0.00 0.00 32.75 3.02
4371 4548 2.769663 AGCCATACAAATCGGTGTCCTA 59.230 45.455 0.00 0.00 32.75 2.94
4372 4549 1.559682 AGCCATACAAATCGGTGTCCT 59.440 47.619 0.00 0.00 32.75 3.85
4373 4550 1.940613 GAGCCATACAAATCGGTGTCC 59.059 52.381 0.00 0.00 32.75 4.02
4374 4551 2.351726 GTGAGCCATACAAATCGGTGTC 59.648 50.000 0.00 0.00 32.75 3.67
4376 4553 1.670811 GGTGAGCCATACAAATCGGTG 59.329 52.381 0.00 0.00 34.09 4.94
4377 4554 1.280710 TGGTGAGCCATACAAATCGGT 59.719 47.619 0.00 0.00 40.46 4.69
4378 4555 2.036958 TGGTGAGCCATACAAATCGG 57.963 50.000 0.00 0.00 40.46 4.18
4393 4578 5.199024 TGTTGTTCCAGAAATCAATGGTG 57.801 39.130 0.00 0.00 37.84 4.17
4410 4595 1.553690 CCCTCCGTCCATCCTGTTGT 61.554 60.000 0.00 0.00 0.00 3.32
4411 4596 1.221840 CCCTCCGTCCATCCTGTTG 59.778 63.158 0.00 0.00 0.00 3.33
4480 4675 2.899976 CATACCTGCAATGTGTACCGA 58.100 47.619 0.00 0.00 0.00 4.69
4501 4696 4.999950 AGCTTACTTGTCATTGAAGGTGAG 59.000 41.667 0.00 0.00 0.00 3.51
4505 4700 4.142730 GCAGAGCTTACTTGTCATTGAAGG 60.143 45.833 0.00 0.00 0.00 3.46
4508 4703 4.006780 TGCAGAGCTTACTTGTCATTGA 57.993 40.909 0.00 0.00 0.00 2.57
4511 4706 3.755378 CCTTTGCAGAGCTTACTTGTCAT 59.245 43.478 0.00 0.00 0.00 3.06
4518 4713 3.565902 AGTTGTTCCTTTGCAGAGCTTAC 59.434 43.478 0.00 0.00 0.00 2.34
4522 4717 1.678101 ACAGTTGTTCCTTTGCAGAGC 59.322 47.619 0.00 0.00 0.00 4.09
4523 4718 2.684881 ACACAGTTGTTCCTTTGCAGAG 59.315 45.455 0.00 0.00 28.43 3.35
4524 4719 2.682856 GACACAGTTGTTCCTTTGCAGA 59.317 45.455 0.00 0.00 35.47 4.26
4525 4720 2.684881 AGACACAGTTGTTCCTTTGCAG 59.315 45.455 0.00 0.00 35.47 4.41
4526 4721 2.423185 CAGACACAGTTGTTCCTTTGCA 59.577 45.455 0.00 0.00 35.47 4.08
4527 4722 2.682856 TCAGACACAGTTGTTCCTTTGC 59.317 45.455 0.00 0.00 35.47 3.68
4528 4723 4.396166 AGTTCAGACACAGTTGTTCCTTTG 59.604 41.667 0.00 0.00 35.47 2.77
4530 4725 4.222124 AGTTCAGACACAGTTGTTCCTT 57.778 40.909 0.00 0.00 35.47 3.36
4531 4726 3.914426 AGTTCAGACACAGTTGTTCCT 57.086 42.857 0.00 0.00 35.47 3.36
4532 4727 4.156008 ACAAAGTTCAGACACAGTTGTTCC 59.844 41.667 0.00 0.00 35.47 3.62
4534 4729 4.615912 GCACAAAGTTCAGACACAGTTGTT 60.616 41.667 0.00 0.00 35.47 2.83
4536 4731 3.127548 AGCACAAAGTTCAGACACAGTTG 59.872 43.478 0.00 0.00 0.00 3.16
4537 4732 3.347216 AGCACAAAGTTCAGACACAGTT 58.653 40.909 0.00 0.00 0.00 3.16
4541 4736 4.622701 AAGAAGCACAAAGTTCAGACAC 57.377 40.909 0.00 0.00 0.00 3.67
4542 4737 4.816385 CCTAAGAAGCACAAAGTTCAGACA 59.184 41.667 0.00 0.00 0.00 3.41
4543 4738 4.816925 ACCTAAGAAGCACAAAGTTCAGAC 59.183 41.667 0.00 0.00 0.00 3.51
4576 4812 3.135457 TAGATCGCCGTCCACGCA 61.135 61.111 0.00 0.00 38.18 5.24
4681 4917 2.202756 GAGTTGGCCGGCGAGTAG 60.203 66.667 22.54 0.00 0.00 2.57
4857 5093 5.783111 ACAAATACAAACCATCTCAAAGCC 58.217 37.500 0.00 0.00 0.00 4.35
4874 5110 3.802507 GGCACGCCGCTACAAATA 58.197 55.556 0.00 0.00 41.91 1.40
4964 5200 4.808364 GGCATTTTTGCAGTTCAAACTACA 59.192 37.500 0.00 0.00 43.76 2.74
4965 5201 5.049828 AGGCATTTTTGCAGTTCAAACTAC 58.950 37.500 0.00 0.00 43.76 2.73
4968 5204 4.880886 AAGGCATTTTTGCAGTTCAAAC 57.119 36.364 0.00 0.00 43.76 2.93
5000 5236 9.680315 CAAGTAATAATGTAGTACTACCTCTGC 57.320 37.037 26.41 12.17 38.48 4.26
5080 5317 6.541641 TGGCAATTTGCTTGTTTAATTCAAGT 59.458 30.769 20.06 1.70 44.28 3.16
5107 5344 8.943925 CAGTTTAATTCTTACTCACACAAAACG 58.056 33.333 0.00 0.00 0.00 3.60
5207 5450 5.268387 TGAAATTTAGCCAGGAAGCCATAA 58.732 37.500 0.00 0.00 0.00 1.90
5208 5451 4.865905 TGAAATTTAGCCAGGAAGCCATA 58.134 39.130 0.00 0.00 0.00 2.74
5223 5466 5.948742 TCCCAGAAAGGTTGTTGAAATTT 57.051 34.783 0.00 0.00 34.66 1.82
5386 5629 9.339850 CACCTTCATAGAAATCTTGAAGATGAT 57.660 33.333 22.70 0.84 45.88 2.45
5394 5637 7.678947 AGTTGTCACCTTCATAGAAATCTTG 57.321 36.000 0.00 0.00 0.00 3.02
5462 5705 4.171005 TCGTCCTTGTATGAACGATGTTC 58.829 43.478 2.80 2.80 39.04 3.18
5489 5732 2.009774 GGACAACAATCCCATCGAGTG 58.990 52.381 0.00 0.00 42.37 3.51
5594 5875 4.148825 CGAGAACCCGAGGGCCAG 62.149 72.222 6.18 0.00 39.32 4.85
5611 5892 4.022416 TCAACACATCTACACCATTTTGCC 60.022 41.667 0.00 0.00 0.00 4.52
5612 5893 5.119931 TCAACACATCTACACCATTTTGC 57.880 39.130 0.00 0.00 0.00 3.68
5655 5936 5.048846 AGTCCTTTCTGCTTCTTTACCAA 57.951 39.130 0.00 0.00 0.00 3.67
5676 5957 0.394565 CCTATGGGGAAAGGCGAGAG 59.605 60.000 0.00 0.00 37.23 3.20
5687 5968 1.584724 ACTCAAGGTCACCTATGGGG 58.415 55.000 0.00 0.00 41.89 4.96
5708 5990 1.529865 CCTTTTTCTCGTGGGTTCGAC 59.470 52.381 0.00 0.00 35.91 4.20
5731 6013 5.104277 TGGTAGAAACCTTTGACTTCAAGGA 60.104 40.000 5.70 0.00 46.91 3.36
5743 6025 5.669164 TGCAAAAACTTGGTAGAAACCTT 57.331 34.783 0.00 0.00 46.91 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.