Multiple sequence alignment - TraesCS7D01G446100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G446100 chr7D 100.000 3555 0 0 2707 6261 566555874 566559428 0.000000e+00 6565.0
1 TraesCS7D01G446100 chr7D 100.000 2384 0 0 1 2384 566553168 566555551 0.000000e+00 4403.0
2 TraesCS7D01G446100 chr7D 91.566 83 5 1 4237 4317 90555340 90555422 5.130000e-21 113.0
3 TraesCS7D01G446100 chr7D 90.588 85 5 3 4239 4322 43122530 43122448 6.640000e-20 110.0
4 TraesCS7D01G446100 chr7A 88.995 1890 142 30 543 2384 652724260 652726131 0.000000e+00 2278.0
5 TraesCS7D01G446100 chr7A 95.075 995 38 3 2707 3691 652726158 652727151 0.000000e+00 1555.0
6 TraesCS7D01G446100 chr7A 95.238 819 36 1 4329 5144 652727548 652728366 0.000000e+00 1293.0
7 TraesCS7D01G446100 chr7A 84.974 945 73 35 5127 6042 652728378 652729282 0.000000e+00 894.0
8 TraesCS7D01G446100 chr7A 87.500 352 13 13 3920 4241 652727150 652727500 1.650000e-100 377.0
9 TraesCS7D01G446100 chr7A 90.323 248 15 6 3684 3922 631367413 631367660 3.640000e-82 316.0
10 TraesCS7D01G446100 chr7A 86.598 194 24 2 108 300 652723822 652724014 4.920000e-51 213.0
11 TraesCS7D01G446100 chr7B 88.376 1841 123 38 601 2384 620657814 620656008 0.000000e+00 2130.0
12 TraesCS7D01G446100 chr7B 93.287 998 45 10 2707 3690 620655981 620654992 0.000000e+00 1452.0
13 TraesCS7D01G446100 chr7B 93.465 811 50 1 4337 5144 620654623 620653813 0.000000e+00 1201.0
14 TraesCS7D01G446100 chr7B 91.715 519 37 4 1486 1999 557311992 557312509 0.000000e+00 715.0
15 TraesCS7D01G446100 chr7B 91.379 522 39 4 1486 2002 678981063 678980543 0.000000e+00 710.0
16 TraesCS7D01G446100 chr7B 90.867 427 28 5 5614 6036 620653245 620652826 4.240000e-156 562.0
17 TraesCS7D01G446100 chr7B 85.028 354 16 11 3922 4239 620654990 620654638 6.050000e-85 326.0
18 TraesCS7D01G446100 chr7B 92.683 205 9 3 6057 6261 620652336 620652138 2.210000e-74 291.0
19 TraesCS7D01G446100 chr7B 85.315 286 15 9 5315 5583 620653517 620653242 2.880000e-68 270.0
20 TraesCS7D01G446100 chr7B 87.248 149 15 3 5132 5278 620653791 620653645 3.880000e-37 167.0
21 TraesCS7D01G446100 chr7B 88.660 97 9 2 4235 4330 234058921 234058826 3.970000e-22 117.0
22 TraesCS7D01G446100 chr5B 91.908 519 36 5 1486 1999 337799562 337800079 0.000000e+00 721.0
23 TraesCS7D01G446100 chr5B 91.522 519 38 4 1486 1999 614476974 614477491 0.000000e+00 710.0
24 TraesCS7D01G446100 chr6B 91.715 519 37 4 1486 1999 452991369 452991886 0.000000e+00 715.0
25 TraesCS7D01G446100 chr1B 91.571 522 38 4 1486 2002 24584141 24583621 0.000000e+00 715.0
26 TraesCS7D01G446100 chr1B 90.456 241 14 6 3690 3921 520524972 520524732 6.100000e-80 309.0
27 TraesCS7D01G446100 chr3B 91.379 522 39 4 1486 2002 794654706 794654186 0.000000e+00 710.0
28 TraesCS7D01G446100 chr5D 91.322 242 12 6 3690 3922 211982078 211982319 7.830000e-84 322.0
29 TraesCS7D01G446100 chr6A 91.250 240 13 5 3687 3918 511039900 511040139 2.820000e-83 320.0
30 TraesCS7D01G446100 chr6A 93.103 87 4 2 4239 4325 97593914 97593998 6.590000e-25 126.0
31 TraesCS7D01G446100 chr6A 81.250 128 15 5 5829 5951 109389447 109389324 1.860000e-15 95.3
32 TraesCS7D01G446100 chr1D 90.717 237 14 6 3690 3918 6543806 6543570 6.100000e-80 309.0
33 TraesCS7D01G446100 chr4D 89.754 244 16 4 3692 3926 26896015 26895772 2.840000e-78 303.0
34 TraesCS7D01G446100 chr2D 90.377 239 12 9 3690 3918 361384266 361384503 2.840000e-78 303.0
35 TraesCS7D01G446100 chr2D 92.500 80 5 1 4239 4317 315109572 315109651 5.130000e-21 113.0
36 TraesCS7D01G446100 chr2B 89.754 244 15 6 3688 3922 353574474 353574716 2.840000e-78 303.0
37 TraesCS7D01G446100 chr2B 92.771 83 4 1 4236 4318 659067328 659067248 1.100000e-22 119.0
38 TraesCS7D01G446100 chr5A 88.710 248 14 12 3686 3921 69124709 69124464 2.210000e-74 291.0
39 TraesCS7D01G446100 chr4A 93.827 81 1 4 4240 4317 45946941 45947020 1.100000e-22 119.0
40 TraesCS7D01G446100 chr2A 91.765 85 5 2 4239 4321 36377011 36377095 3.970000e-22 117.0
41 TraesCS7D01G446100 chrUn 91.667 84 5 2 4239 4320 24265353 24265270 1.430000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G446100 chr7D 566553168 566559428 6260 False 5484.000000 6565 100.000000 1 6261 2 chr7D.!!$F2 6260
1 TraesCS7D01G446100 chr7A 652723822 652729282 5460 False 1101.666667 2278 89.730000 108 6042 6 chr7A.!!$F2 5934
2 TraesCS7D01G446100 chr7B 620652138 620657814 5676 True 799.875000 2130 89.533625 601 6261 8 chr7B.!!$R3 5660
3 TraesCS7D01G446100 chr7B 557311992 557312509 517 False 715.000000 715 91.715000 1486 1999 1 chr7B.!!$F1 513
4 TraesCS7D01G446100 chr7B 678980543 678981063 520 True 710.000000 710 91.379000 1486 2002 1 chr7B.!!$R2 516
5 TraesCS7D01G446100 chr5B 337799562 337800079 517 False 721.000000 721 91.908000 1486 1999 1 chr5B.!!$F1 513
6 TraesCS7D01G446100 chr5B 614476974 614477491 517 False 710.000000 710 91.522000 1486 1999 1 chr5B.!!$F2 513
7 TraesCS7D01G446100 chr6B 452991369 452991886 517 False 715.000000 715 91.715000 1486 1999 1 chr6B.!!$F1 513
8 TraesCS7D01G446100 chr1B 24583621 24584141 520 True 715.000000 715 91.571000 1486 2002 1 chr1B.!!$R1 516
9 TraesCS7D01G446100 chr3B 794654186 794654706 520 True 710.000000 710 91.379000 1486 2002 1 chr3B.!!$R1 516

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
558 625 0.100503 GTGCGAAACAGGTTTGTGCT 59.899 50.000 15.42 0.0 37.67 4.40 F
672 744 0.263765 AATCCCCGACCTAGGCACTA 59.736 55.000 9.30 0.0 41.75 2.74 F
735 810 0.329261 TCGACGTAGGGAAGGGAGAA 59.671 55.000 0.00 0.0 0.00 2.87 F
982 1073 0.684805 GCTCGAGGAAGGGAGGAAGA 60.685 60.000 15.58 0.0 0.00 2.87 F
1259 1385 1.003718 GAAGGGGAAGTCGGTGGTG 60.004 63.158 0.00 0.0 0.00 4.17 F
1995 2149 1.032114 CCAGGCCTCGGAAATTGGTC 61.032 60.000 0.00 0.0 0.00 4.02 F
3650 3829 0.107703 TCATCGGGTTGCCTGTGATC 60.108 55.000 0.00 0.0 0.00 2.92 F
3772 3951 0.038892 TAACCAACGAGACCGACTGC 60.039 55.000 0.00 0.0 39.50 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1638 1782 0.331278 TACATTGCACCTTCCCTGGG 59.669 55.000 6.33 6.33 0.00 4.45 R
1995 2149 1.499056 GACGCCAATGCACAGACTG 59.501 57.895 0.00 0.00 37.32 3.51 R
2215 2369 2.027837 AGCACATTTTTCCCAATGGCTC 60.028 45.455 0.00 0.00 36.64 4.70 R
2829 2984 1.202065 CGATTCCACATCACGCAAAGG 60.202 52.381 0.00 0.00 0.00 3.11 R
2916 3071 4.323417 TGCCAATACTCGAATCTTGTTGT 58.677 39.130 0.00 0.00 0.00 3.32 R
3753 3932 0.038892 GCAGTCGGTCTCGTTGGTTA 60.039 55.000 0.00 0.00 37.69 2.85 R
4767 5021 0.178967 TTGCCAATGCTTCACCTGGA 60.179 50.000 0.00 0.00 38.71 3.86 R
5582 5986 0.247736 GGTAGACTCCTGTGCCACTG 59.752 60.000 0.00 0.00 0.00 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.429957 AGCAAAACTGCTTGACTAAAGAG 57.570 39.130 0.00 0.00 43.52 2.85
23 24 3.977579 GCAAAACTGCTTGACTAAAGAGC 59.022 43.478 0.00 0.00 38.24 4.09
24 25 4.261363 GCAAAACTGCTTGACTAAAGAGCT 60.261 41.667 0.00 0.00 38.24 4.09
25 26 5.210715 CAAAACTGCTTGACTAAAGAGCTG 58.789 41.667 0.00 0.00 38.24 4.24
26 27 2.421619 ACTGCTTGACTAAAGAGCTGC 58.578 47.619 0.00 0.00 38.24 5.25
27 28 2.038295 ACTGCTTGACTAAAGAGCTGCT 59.962 45.455 0.00 0.00 38.24 4.24
28 29 2.415857 CTGCTTGACTAAAGAGCTGCTG 59.584 50.000 7.01 0.00 38.24 4.41
29 30 1.736681 GCTTGACTAAAGAGCTGCTGG 59.263 52.381 7.01 0.00 38.24 4.85
30 31 2.873649 GCTTGACTAAAGAGCTGCTGGT 60.874 50.000 7.01 0.00 38.24 4.00
31 32 3.406764 CTTGACTAAAGAGCTGCTGGTT 58.593 45.455 7.01 3.04 38.24 3.67
32 33 3.492102 TGACTAAAGAGCTGCTGGTTT 57.508 42.857 7.01 9.29 0.00 3.27
33 34 4.617253 TGACTAAAGAGCTGCTGGTTTA 57.383 40.909 7.01 9.97 0.00 2.01
34 35 5.165961 TGACTAAAGAGCTGCTGGTTTAT 57.834 39.130 7.01 2.13 0.00 1.40
35 36 6.294361 TGACTAAAGAGCTGCTGGTTTATA 57.706 37.500 7.01 0.00 0.00 0.98
36 37 6.341316 TGACTAAAGAGCTGCTGGTTTATAG 58.659 40.000 7.01 4.81 0.00 1.31
37 38 6.154534 TGACTAAAGAGCTGCTGGTTTATAGA 59.845 38.462 7.01 0.00 0.00 1.98
38 39 6.342111 ACTAAAGAGCTGCTGGTTTATAGAC 58.658 40.000 7.01 0.00 0.00 2.59
39 40 4.826274 AAGAGCTGCTGGTTTATAGACA 57.174 40.909 7.01 0.00 0.00 3.41
40 41 5.365021 AAGAGCTGCTGGTTTATAGACAT 57.635 39.130 7.01 0.00 0.00 3.06
41 42 6.485830 AAGAGCTGCTGGTTTATAGACATA 57.514 37.500 7.01 0.00 0.00 2.29
42 43 6.678568 AGAGCTGCTGGTTTATAGACATAT 57.321 37.500 7.01 0.00 0.00 1.78
43 44 7.072263 AGAGCTGCTGGTTTATAGACATATT 57.928 36.000 7.01 0.00 0.00 1.28
44 45 8.195165 AGAGCTGCTGGTTTATAGACATATTA 57.805 34.615 7.01 0.00 0.00 0.98
45 46 8.091449 AGAGCTGCTGGTTTATAGACATATTAC 58.909 37.037 7.01 0.00 0.00 1.89
46 47 7.735917 AGCTGCTGGTTTATAGACATATTACA 58.264 34.615 0.00 0.00 0.00 2.41
47 48 8.210946 AGCTGCTGGTTTATAGACATATTACAA 58.789 33.333 0.00 0.00 0.00 2.41
48 49 8.499162 GCTGCTGGTTTATAGACATATTACAAG 58.501 37.037 0.00 0.00 0.00 3.16
49 50 8.378172 TGCTGGTTTATAGACATATTACAAGC 57.622 34.615 0.00 0.00 34.95 4.01
50 51 7.990314 TGCTGGTTTATAGACATATTACAAGCA 59.010 33.333 0.00 0.00 38.33 3.91
51 52 8.499162 GCTGGTTTATAGACATATTACAAGCAG 58.501 37.037 0.00 0.00 34.74 4.24
52 53 9.764363 CTGGTTTATAGACATATTACAAGCAGA 57.236 33.333 0.00 0.00 0.00 4.26
78 79 0.248289 GCCTACAGAACCGCTGGTTA 59.752 55.000 12.01 0.00 46.95 2.85
79 80 1.134491 GCCTACAGAACCGCTGGTTAT 60.134 52.381 12.01 7.26 46.95 1.89
80 81 2.101917 GCCTACAGAACCGCTGGTTATA 59.898 50.000 12.01 5.94 46.95 0.98
81 82 3.799232 GCCTACAGAACCGCTGGTTATAG 60.799 52.174 12.01 12.75 46.95 1.31
82 83 3.635373 CCTACAGAACCGCTGGTTATAGA 59.365 47.826 12.01 1.92 46.95 1.98
83 84 3.521947 ACAGAACCGCTGGTTATAGAC 57.478 47.619 12.01 1.68 46.95 2.59
84 85 2.829720 ACAGAACCGCTGGTTATAGACA 59.170 45.455 12.01 0.00 46.95 3.41
85 86 3.451178 ACAGAACCGCTGGTTATAGACAT 59.549 43.478 12.01 0.00 46.95 3.06
86 87 4.647853 ACAGAACCGCTGGTTATAGACATA 59.352 41.667 12.01 0.00 46.95 2.29
87 88 5.304614 ACAGAACCGCTGGTTATAGACATAT 59.695 40.000 12.01 0.00 46.95 1.78
88 89 6.183360 ACAGAACCGCTGGTTATAGACATATT 60.183 38.462 12.01 0.00 46.95 1.28
89 90 6.706270 CAGAACCGCTGGTTATAGACATATTT 59.294 38.462 12.01 0.00 46.95 1.40
90 91 6.929606 AGAACCGCTGGTTATAGACATATTTC 59.070 38.462 12.01 0.00 46.95 2.17
91 92 6.169557 ACCGCTGGTTATAGACATATTTCA 57.830 37.500 0.00 0.00 27.29 2.69
92 93 6.588204 ACCGCTGGTTATAGACATATTTCAA 58.412 36.000 0.00 0.00 27.29 2.69
93 94 6.706270 ACCGCTGGTTATAGACATATTTCAAG 59.294 38.462 0.00 0.00 27.29 3.02
94 95 6.147821 CCGCTGGTTATAGACATATTTCAAGG 59.852 42.308 0.00 0.00 0.00 3.61
95 96 6.929049 CGCTGGTTATAGACATATTTCAAGGA 59.071 38.462 0.00 0.00 0.00 3.36
96 97 7.441157 CGCTGGTTATAGACATATTTCAAGGAA 59.559 37.037 0.00 0.00 0.00 3.36
97 98 9.120538 GCTGGTTATAGACATATTTCAAGGAAA 57.879 33.333 0.00 0.00 35.94 3.13
103 104 8.814038 ATAGACATATTTCAAGGAAAACTGCT 57.186 30.769 0.00 2.52 35.11 4.24
104 105 6.917533 AGACATATTTCAAGGAAAACTGCTG 58.082 36.000 0.00 0.00 35.11 4.41
105 106 6.029346 ACATATTTCAAGGAAAACTGCTGG 57.971 37.500 0.00 0.00 35.11 4.85
106 107 5.539955 ACATATTTCAAGGAAAACTGCTGGT 59.460 36.000 0.00 0.00 35.11 4.00
107 108 3.799281 TTTCAAGGAAAACTGCTGGTG 57.201 42.857 0.00 0.00 0.00 4.17
108 109 1.691196 TCAAGGAAAACTGCTGGTGG 58.309 50.000 0.00 0.00 0.00 4.61
109 110 1.064017 TCAAGGAAAACTGCTGGTGGT 60.064 47.619 0.00 0.00 0.00 4.16
110 111 2.173782 TCAAGGAAAACTGCTGGTGGTA 59.826 45.455 0.00 0.00 0.00 3.25
111 112 2.955660 CAAGGAAAACTGCTGGTGGTAA 59.044 45.455 0.00 0.00 0.00 2.85
112 113 3.525800 AGGAAAACTGCTGGTGGTAAT 57.474 42.857 0.00 0.00 0.00 1.89
113 114 4.650972 AGGAAAACTGCTGGTGGTAATA 57.349 40.909 0.00 0.00 0.00 0.98
114 115 4.589908 AGGAAAACTGCTGGTGGTAATAG 58.410 43.478 0.00 0.00 0.00 1.73
115 116 3.128764 GGAAAACTGCTGGTGGTAATAGC 59.871 47.826 0.00 0.00 37.93 2.97
116 117 2.420058 AACTGCTGGTGGTAATAGCC 57.580 50.000 0.00 0.00 36.64 3.93
117 118 1.584724 ACTGCTGGTGGTAATAGCCT 58.415 50.000 0.00 0.00 36.64 4.58
160 161 4.854399 TCTGCAAAGTTTACAAATCCACG 58.146 39.130 0.00 0.00 0.00 4.94
164 165 5.157781 GCAAAGTTTACAAATCCACGCATA 58.842 37.500 0.00 0.00 0.00 3.14
165 166 5.804979 GCAAAGTTTACAAATCCACGCATAT 59.195 36.000 0.00 0.00 0.00 1.78
179 180 4.261530 CCACGCATATCATTTATTGGTGCA 60.262 41.667 0.00 0.00 32.05 4.57
237 239 8.680903 CATATTCCAAGCAAAGTCTACAAATCT 58.319 33.333 0.00 0.00 0.00 2.40
243 245 4.627467 AGCAAAGTCTACAAATCTACAGCG 59.373 41.667 0.00 0.00 0.00 5.18
252 254 3.120199 ACAAATCTACAGCGCATGTTCAC 60.120 43.478 11.47 0.00 39.96 3.18
253 255 2.680312 ATCTACAGCGCATGTTCACT 57.320 45.000 11.47 0.00 39.96 3.41
255 257 1.272212 TCTACAGCGCATGTTCACTGA 59.728 47.619 11.47 3.41 39.96 3.41
257 259 1.527034 ACAGCGCATGTTCACTGAAT 58.473 45.000 11.47 0.00 39.96 2.57
258 260 2.698803 ACAGCGCATGTTCACTGAATA 58.301 42.857 11.47 0.00 39.96 1.75
261 263 4.156556 ACAGCGCATGTTCACTGAATATTT 59.843 37.500 11.47 0.00 39.96 1.40
271 273 8.109705 TGTTCACTGAATATTTAACTGCACAT 57.890 30.769 0.00 0.00 0.00 3.21
283 285 7.513190 TTTAACTGCACATTGTTTACACAAC 57.487 32.000 0.00 0.00 45.88 3.32
285 287 5.323371 ACTGCACATTGTTTACACAACTT 57.677 34.783 0.00 0.00 45.88 2.66
290 292 8.789881 TGCACATTGTTTACACAACTTATTAC 57.210 30.769 0.00 0.00 45.88 1.89
312 314 8.706322 TTACTCTAATATGACATCCAGTAGCA 57.294 34.615 0.00 0.00 0.00 3.49
313 315 6.987386 ACTCTAATATGACATCCAGTAGCAC 58.013 40.000 0.00 0.00 0.00 4.40
314 316 6.551227 ACTCTAATATGACATCCAGTAGCACA 59.449 38.462 0.00 0.00 0.00 4.57
315 317 6.986250 TCTAATATGACATCCAGTAGCACAG 58.014 40.000 0.00 0.00 0.00 3.66
316 318 2.996249 ATGACATCCAGTAGCACAGG 57.004 50.000 0.00 0.00 0.00 4.00
317 319 1.937191 TGACATCCAGTAGCACAGGA 58.063 50.000 3.60 3.60 38.19 3.86
318 320 1.550524 TGACATCCAGTAGCACAGGAC 59.449 52.381 3.26 0.00 36.57 3.85
319 321 1.550524 GACATCCAGTAGCACAGGACA 59.449 52.381 3.26 0.00 36.57 4.02
320 322 1.977854 ACATCCAGTAGCACAGGACAA 59.022 47.619 3.26 0.00 36.57 3.18
321 323 2.289694 ACATCCAGTAGCACAGGACAAC 60.290 50.000 3.26 0.00 36.57 3.32
322 324 1.419381 TCCAGTAGCACAGGACAACA 58.581 50.000 0.00 0.00 28.04 3.33
323 325 1.977854 TCCAGTAGCACAGGACAACAT 59.022 47.619 0.00 0.00 28.04 2.71
324 326 2.079158 CCAGTAGCACAGGACAACATG 58.921 52.381 0.00 0.00 0.00 3.21
325 327 1.466167 CAGTAGCACAGGACAACATGC 59.534 52.381 0.00 0.00 38.39 4.06
326 328 0.804989 GTAGCACAGGACAACATGCC 59.195 55.000 0.00 0.00 38.92 4.40
327 329 0.673333 TAGCACAGGACAACATGCCG 60.673 55.000 0.00 0.00 38.92 5.69
328 330 1.965930 GCACAGGACAACATGCCGA 60.966 57.895 0.00 0.00 31.71 5.54
342 344 2.035530 TGCCGATGCACATATCACAA 57.964 45.000 0.00 0.00 44.23 3.33
343 345 2.363683 TGCCGATGCACATATCACAAA 58.636 42.857 0.00 0.00 44.23 2.83
346 348 3.732219 GCCGATGCACATATCACAAAATG 59.268 43.478 0.00 0.00 37.47 2.32
347 349 4.734402 GCCGATGCACATATCACAAAATGT 60.734 41.667 0.00 0.00 36.78 2.71
348 350 5.505489 GCCGATGCACATATCACAAAATGTA 60.505 40.000 0.00 0.00 34.61 2.29
349 351 5.909054 CCGATGCACATATCACAAAATGTAC 59.091 40.000 0.00 0.00 34.61 2.90
351 353 6.458070 CGATGCACATATCACAAAATGTACCA 60.458 38.462 0.00 0.00 34.61 3.25
352 354 6.193514 TGCACATATCACAAAATGTACCAG 57.806 37.500 0.00 0.00 34.61 4.00
357 359 9.345517 CACATATCACAAAATGTACCAGAAAAG 57.654 33.333 0.00 0.00 34.61 2.27
358 360 9.077885 ACATATCACAAAATGTACCAGAAAAGT 57.922 29.630 0.00 0.00 34.61 2.66
359 361 9.912634 CATATCACAAAATGTACCAGAAAAGTT 57.087 29.630 0.00 0.00 0.00 2.66
361 363 8.871686 ATCACAAAATGTACCAGAAAAGTTTC 57.128 30.769 0.00 0.00 37.45 2.78
362 364 7.831753 TCACAAAATGTACCAGAAAAGTTTCA 58.168 30.769 6.56 0.00 39.61 2.69
363 365 7.973388 TCACAAAATGTACCAGAAAAGTTTCAG 59.027 33.333 6.56 0.00 39.61 3.02
364 366 6.756542 ACAAAATGTACCAGAAAAGTTTCAGC 59.243 34.615 6.56 0.00 39.61 4.26
367 413 5.437289 TGTACCAGAAAAGTTTCAGCATG 57.563 39.130 6.56 0.00 39.61 4.06
384 430 3.917329 CATGAATGCCCAGATCACATC 57.083 47.619 0.00 0.00 0.00 3.06
385 431 3.487372 CATGAATGCCCAGATCACATCT 58.513 45.455 0.00 0.00 41.15 2.90
387 433 4.776435 TGAATGCCCAGATCACATCTAA 57.224 40.909 0.00 0.00 37.58 2.10
388 434 5.314718 TGAATGCCCAGATCACATCTAAT 57.685 39.130 0.00 0.00 37.58 1.73
390 436 6.840527 TGAATGCCCAGATCACATCTAATTA 58.159 36.000 0.00 0.00 37.58 1.40
391 437 6.712095 TGAATGCCCAGATCACATCTAATTAC 59.288 38.462 0.00 0.00 37.58 1.89
392 438 5.894298 TGCCCAGATCACATCTAATTACT 57.106 39.130 0.00 0.00 37.58 2.24
393 439 6.994421 TGCCCAGATCACATCTAATTACTA 57.006 37.500 0.00 0.00 37.58 1.82
394 440 7.559335 TGCCCAGATCACATCTAATTACTAT 57.441 36.000 0.00 0.00 37.58 2.12
405 462 9.408648 CACATCTAATTACTATGGGAAAGGTTT 57.591 33.333 7.59 0.00 0.00 3.27
410 467 7.568199 AATTACTATGGGAAAGGTTTCATCG 57.432 36.000 4.89 0.00 38.92 3.84
411 468 3.279434 ACTATGGGAAAGGTTTCATCGC 58.721 45.455 4.89 0.00 38.92 4.58
426 483 2.170397 TCATCGCACCATGTCCATAAGT 59.830 45.455 0.00 0.00 0.00 2.24
428 485 2.355197 TCGCACCATGTCCATAAGTTG 58.645 47.619 0.00 0.00 0.00 3.16
429 486 2.083774 CGCACCATGTCCATAAGTTGT 58.916 47.619 0.00 0.00 0.00 3.32
436 493 4.766891 CCATGTCCATAAGTTGTGGTTTCT 59.233 41.667 17.26 0.35 37.96 2.52
440 497 5.530915 TGTCCATAAGTTGTGGTTTCTTGAG 59.469 40.000 17.26 0.00 37.96 3.02
442 499 5.763204 TCCATAAGTTGTGGTTTCTTGAGTC 59.237 40.000 17.26 0.00 37.96 3.36
446 503 5.041191 AGTTGTGGTTTCTTGAGTCTGAT 57.959 39.130 0.00 0.00 0.00 2.90
447 504 4.818546 AGTTGTGGTTTCTTGAGTCTGATG 59.181 41.667 0.00 0.00 0.00 3.07
468 525 7.988737 TGATGCCATTTCTGATTTTACAGTAG 58.011 34.615 0.00 0.00 38.79 2.57
471 528 7.592938 TGCCATTTCTGATTTTACAGTAGTTG 58.407 34.615 0.00 0.00 38.79 3.16
472 529 7.230510 TGCCATTTCTGATTTTACAGTAGTTGT 59.769 33.333 0.00 0.00 43.96 3.32
473 530 7.538678 GCCATTTCTGATTTTACAGTAGTTGTG 59.461 37.037 0.00 0.00 41.10 3.33
474 531 8.783093 CCATTTCTGATTTTACAGTAGTTGTGA 58.217 33.333 0.00 0.00 41.10 3.58
475 532 9.599322 CATTTCTGATTTTACAGTAGTTGTGAC 57.401 33.333 0.00 0.00 41.10 3.67
477 534 7.062749 TCTGATTTTACAGTAGTTGTGACCT 57.937 36.000 0.00 0.00 41.10 3.85
495 562 8.908786 TGTGACCTTATCAAGAAATATCATCC 57.091 34.615 0.00 0.00 39.72 3.51
502 569 6.645790 ATCAAGAAATATCATCCCAACAGC 57.354 37.500 0.00 0.00 0.00 4.40
503 570 4.576053 TCAAGAAATATCATCCCAACAGCG 59.424 41.667 0.00 0.00 0.00 5.18
504 571 3.480470 AGAAATATCATCCCAACAGCGG 58.520 45.455 0.00 0.00 0.00 5.52
512 579 3.074281 CCAACAGCGGGGGAACTA 58.926 61.111 0.00 0.00 0.00 2.24
513 580 1.078426 CCAACAGCGGGGGAACTAG 60.078 63.158 0.00 0.00 0.00 2.57
514 581 1.078426 CAACAGCGGGGGAACTAGG 60.078 63.158 0.00 0.00 0.00 3.02
515 582 2.967946 AACAGCGGGGGAACTAGGC 61.968 63.158 0.00 0.00 0.00 3.93
516 583 3.399181 CAGCGGGGGAACTAGGCA 61.399 66.667 0.00 0.00 0.00 4.75
517 584 2.366972 AGCGGGGGAACTAGGCAT 60.367 61.111 0.00 0.00 0.00 4.40
518 585 1.074775 AGCGGGGGAACTAGGCATA 60.075 57.895 0.00 0.00 0.00 3.14
519 586 1.122019 AGCGGGGGAACTAGGCATAG 61.122 60.000 3.34 3.34 34.96 2.23
520 587 1.408453 GCGGGGGAACTAGGCATAGT 61.408 60.000 4.95 4.95 44.37 2.12
521 588 0.393077 CGGGGGAACTAGGCATAGTG 59.607 60.000 12.49 0.00 41.54 2.74
522 589 0.108774 GGGGGAACTAGGCATAGTGC 59.891 60.000 12.49 10.21 41.54 4.40
533 600 2.540265 GCATAGTGCCACTGCTAGAT 57.460 50.000 7.83 0.00 37.42 1.98
534 601 2.411904 GCATAGTGCCACTGCTAGATC 58.588 52.381 7.83 0.00 37.42 2.75
535 602 2.869636 GCATAGTGCCACTGCTAGATCC 60.870 54.545 7.83 0.00 37.42 3.36
536 603 2.159179 TAGTGCCACTGCTAGATCCA 57.841 50.000 7.83 0.00 38.71 3.41
537 604 1.279496 AGTGCCACTGCTAGATCCAA 58.721 50.000 0.00 0.00 38.71 3.53
538 605 1.209019 AGTGCCACTGCTAGATCCAAG 59.791 52.381 0.00 0.00 38.71 3.61
539 606 0.543277 TGCCACTGCTAGATCCAAGG 59.457 55.000 0.00 0.00 38.71 3.61
540 607 0.543749 GCCACTGCTAGATCCAAGGT 59.456 55.000 0.00 0.00 33.53 3.50
541 608 1.745141 GCCACTGCTAGATCCAAGGTG 60.745 57.143 0.00 0.00 33.53 4.00
545 612 0.901827 TGCTAGATCCAAGGTGCGAA 59.098 50.000 0.00 0.00 0.00 4.70
547 614 1.666189 GCTAGATCCAAGGTGCGAAAC 59.334 52.381 0.00 0.00 0.00 2.78
552 619 0.106918 TCCAAGGTGCGAAACAGGTT 60.107 50.000 0.00 0.00 0.00 3.50
558 625 0.100503 GTGCGAAACAGGTTTGTGCT 59.899 50.000 15.42 0.00 37.67 4.40
567 634 4.085357 ACAGGTTTGTGCTATTCTGACA 57.915 40.909 0.00 0.00 35.83 3.58
571 638 6.108687 CAGGTTTGTGCTATTCTGACATCTA 58.891 40.000 0.00 0.00 0.00 1.98
582 649 2.702478 TCTGACATCTATGCCCCTCAAG 59.298 50.000 0.00 0.00 0.00 3.02
583 650 1.770658 TGACATCTATGCCCCTCAAGG 59.229 52.381 0.00 0.00 0.00 3.61
641 713 2.687935 AGCATTTCAACGAACACCTTGT 59.312 40.909 0.00 0.00 0.00 3.16
670 742 1.049289 AGAATCCCCGACCTAGGCAC 61.049 60.000 9.30 2.28 0.00 5.01
671 743 1.003051 AATCCCCGACCTAGGCACT 59.997 57.895 9.30 0.00 46.37 4.40
672 744 0.263765 AATCCCCGACCTAGGCACTA 59.736 55.000 9.30 0.00 41.75 2.74
712 787 3.885777 GAAGCGGCAAGATTCGAAG 57.114 52.632 3.35 0.00 35.41 3.79
717 792 0.727398 CGGCAAGATTCGAAGGGTTC 59.273 55.000 3.35 0.00 0.00 3.62
735 810 0.329261 TCGACGTAGGGAAGGGAGAA 59.671 55.000 0.00 0.00 0.00 2.87
860 935 1.589196 GGATCAGCCTGCGTACGAC 60.589 63.158 21.65 11.11 0.00 4.34
871 953 4.139234 GTACGACCGGGTGGAGGC 62.139 72.222 16.56 1.88 39.21 4.70
982 1073 0.684805 GCTCGAGGAAGGGAGGAAGA 60.685 60.000 15.58 0.00 0.00 2.87
1259 1385 1.003718 GAAGGGGAAGTCGGTGGTG 60.004 63.158 0.00 0.00 0.00 4.17
1348 1474 2.749441 GGCCAGCTTCTGTGAGCC 60.749 66.667 0.00 0.00 43.74 4.70
1355 1481 1.298014 CTTCTGTGAGCCCCCTGTC 59.702 63.158 0.00 0.00 0.00 3.51
1397 1523 7.781324 ATGGTTTCCTTAAATCATGTGTTCT 57.219 32.000 0.00 0.00 43.33 3.01
1398 1524 8.877864 ATGGTTTCCTTAAATCATGTGTTCTA 57.122 30.769 0.00 0.00 43.33 2.10
1399 1525 8.877864 TGGTTTCCTTAAATCATGTGTTCTAT 57.122 30.769 0.00 0.00 30.64 1.98
1400 1526 8.956426 TGGTTTCCTTAAATCATGTGTTCTATC 58.044 33.333 0.00 0.00 30.64 2.08
1401 1527 9.178758 GGTTTCCTTAAATCATGTGTTCTATCT 57.821 33.333 0.00 0.00 0.00 1.98
1417 1543 5.193663 TCTATCTTCTATGTGCTGTCAGC 57.806 43.478 18.32 18.32 42.82 4.26
1427 1553 2.872557 CTGTCAGCCATGGTTGCG 59.127 61.111 22.84 10.26 0.00 4.85
1438 1564 3.610114 GCCATGGTTGCGTATCATTCATC 60.610 47.826 14.67 0.00 0.00 2.92
1489 1632 4.739046 AATCAGAGTTCGTGCTCTTTTG 57.261 40.909 8.37 1.29 42.69 2.44
1492 1635 3.309682 TCAGAGTTCGTGCTCTTTTGTTG 59.690 43.478 8.37 0.16 42.69 3.33
1496 1639 2.187351 TCGTGCTCTTTTGTTGTTGC 57.813 45.000 0.00 0.00 0.00 4.17
1503 1646 3.679502 GCTCTTTTGTTGTTGCAACTGTT 59.320 39.130 28.61 0.00 0.00 3.16
1517 1660 9.409312 TGTTGCAACTGTTCTATATTTTCATTG 57.591 29.630 28.61 0.00 0.00 2.82
1537 1680 5.359194 TTGGAGATGGGATGTTTCTACTC 57.641 43.478 0.00 0.00 0.00 2.59
1656 1800 1.077265 CCCAGGGAAGGTGCAATGT 59.923 57.895 0.00 0.00 0.00 2.71
1723 1867 6.436843 AGGTGGAATGCTTAATAAGTTTCG 57.563 37.500 1.68 0.00 0.00 3.46
1744 1888 3.111098 GTCTTGCAGCAAACAACAAGAG 58.889 45.455 9.65 0.00 46.61 2.85
1779 1926 3.381908 CCCTGTTGCTAGGTAGTAGAGTG 59.618 52.174 0.00 0.00 36.02 3.51
1815 1962 1.351017 TCCAACTAGTTGCTTCAGGGG 59.649 52.381 27.05 13.05 39.16 4.79
1819 1967 2.054799 ACTAGTTGCTTCAGGGGTGAA 58.945 47.619 0.00 0.00 0.00 3.18
1995 2149 1.032114 CCAGGCCTCGGAAATTGGTC 61.032 60.000 0.00 0.00 0.00 4.02
1999 2153 1.087501 GCCTCGGAAATTGGTCAGTC 58.912 55.000 0.00 0.00 0.00 3.51
2082 2236 1.823250 GCCTTCTTCCCACCACACATT 60.823 52.381 0.00 0.00 0.00 2.71
2110 2264 8.011290 AGGTACCTATTTACATCTATGGTCAGT 58.989 37.037 14.41 0.00 0.00 3.41
2126 2280 4.646945 TGGTCAGTGTTTTTGCCTTAATGA 59.353 37.500 0.00 0.00 0.00 2.57
2129 2283 4.336993 TCAGTGTTTTTGCCTTAATGACGT 59.663 37.500 0.00 0.00 0.00 4.34
2215 2369 9.244799 GTTGAAACCCAGTAAATTTAGAAAGTG 57.755 33.333 0.00 0.00 0.00 3.16
2226 2380 4.380843 TTTAGAAAGTGAGCCATTGGGA 57.619 40.909 4.53 0.00 35.59 4.37
2243 2397 2.428890 TGGGAAAAATGTGCTGTTCGTT 59.571 40.909 0.00 0.00 0.00 3.85
2729 2884 2.561478 AGACGGTGGTTTGTAATGCT 57.439 45.000 0.00 0.00 0.00 3.79
2733 2888 3.936453 GACGGTGGTTTGTAATGCTGATA 59.064 43.478 0.00 0.00 0.00 2.15
2893 3048 4.019860 AGCACAGAAGACATACACCTTGAT 60.020 41.667 0.00 0.00 0.00 2.57
2898 3053 9.770097 CACAGAAGACATACACCTTGATATTAT 57.230 33.333 0.00 0.00 0.00 1.28
2938 3093 4.154015 CACAACAAGATTCGAGTATTGGCA 59.846 41.667 17.89 0.00 0.00 4.92
3117 3289 9.489084 GCATATCCTCAACACACTGTTATTATA 57.511 33.333 0.00 0.00 38.77 0.98
3223 3395 4.533815 TCGCAAGGAGGAGAAGATTACTA 58.466 43.478 0.00 0.00 38.47 1.82
3636 3815 5.869888 GGCTTGAGGGTAACTTATATCATCG 59.130 44.000 0.00 0.00 0.00 3.84
3650 3829 0.107703 TCATCGGGTTGCCTGTGATC 60.108 55.000 0.00 0.00 0.00 2.92
3656 3835 0.463654 GGTTGCCTGTGATCGCCATA 60.464 55.000 3.31 0.00 0.00 2.74
3689 3868 9.388506 CATCTATTCTTTGTGGATAAGTCAAGT 57.611 33.333 0.00 0.00 0.00 3.16
3691 3870 9.871238 TCTATTCTTTGTGGATAAGTCAAGTAC 57.129 33.333 0.00 0.00 0.00 2.73
3692 3871 9.877178 CTATTCTTTGTGGATAAGTCAAGTACT 57.123 33.333 0.00 0.00 41.49 2.73
3693 3872 8.779354 ATTCTTTGTGGATAAGTCAAGTACTC 57.221 34.615 0.00 0.00 37.50 2.59
3694 3873 6.698380 TCTTTGTGGATAAGTCAAGTACTCC 58.302 40.000 0.00 0.00 37.50 3.85
3695 3874 5.416271 TTGTGGATAAGTCAAGTACTCCC 57.584 43.478 0.00 0.00 37.50 4.30
3696 3875 4.684724 TGTGGATAAGTCAAGTACTCCCT 58.315 43.478 0.00 0.00 37.50 4.20
3697 3876 4.710375 TGTGGATAAGTCAAGTACTCCCTC 59.290 45.833 0.00 0.00 37.50 4.30
3698 3877 4.099727 GTGGATAAGTCAAGTACTCCCTCC 59.900 50.000 0.00 0.00 37.50 4.30
3699 3878 3.318557 GGATAAGTCAAGTACTCCCTCCG 59.681 52.174 0.00 0.00 37.50 4.63
3700 3879 2.305858 AAGTCAAGTACTCCCTCCGT 57.694 50.000 0.00 0.00 37.50 4.69
3701 3880 2.305858 AGTCAAGTACTCCCTCCGTT 57.694 50.000 0.00 0.00 30.33 4.44
3702 3881 2.169330 AGTCAAGTACTCCCTCCGTTC 58.831 52.381 0.00 0.00 30.33 3.95
3703 3882 1.204231 GTCAAGTACTCCCTCCGTTCC 59.796 57.143 0.00 0.00 0.00 3.62
3704 3883 1.203087 TCAAGTACTCCCTCCGTTCCA 60.203 52.381 0.00 0.00 0.00 3.53
3705 3884 1.067071 CAAGTACTCCCTCCGTTCCAC 60.067 57.143 0.00 0.00 0.00 4.02
3706 3885 0.113776 AGTACTCCCTCCGTTCCACA 59.886 55.000 0.00 0.00 0.00 4.17
3707 3886 0.971386 GTACTCCCTCCGTTCCACAA 59.029 55.000 0.00 0.00 0.00 3.33
3708 3887 1.553704 GTACTCCCTCCGTTCCACAAT 59.446 52.381 0.00 0.00 0.00 2.71
3709 3888 1.946984 ACTCCCTCCGTTCCACAATA 58.053 50.000 0.00 0.00 0.00 1.90
3710 3889 2.478292 ACTCCCTCCGTTCCACAATAT 58.522 47.619 0.00 0.00 0.00 1.28
3711 3890 3.649843 ACTCCCTCCGTTCCACAATATA 58.350 45.455 0.00 0.00 0.00 0.86
3712 3891 3.641906 ACTCCCTCCGTTCCACAATATAG 59.358 47.826 0.00 0.00 0.00 1.31
3713 3892 3.641906 CTCCCTCCGTTCCACAATATAGT 59.358 47.826 0.00 0.00 0.00 2.12
3714 3893 3.386726 TCCCTCCGTTCCACAATATAGTG 59.613 47.826 0.00 0.00 39.21 2.74
3715 3894 3.131396 CCTCCGTTCCACAATATAGTGC 58.869 50.000 0.00 0.00 38.18 4.40
3716 3895 2.794910 CTCCGTTCCACAATATAGTGCG 59.205 50.000 0.00 0.00 38.18 5.34
3717 3896 1.260561 CCGTTCCACAATATAGTGCGC 59.739 52.381 0.00 0.00 38.18 6.09
3718 3897 1.260561 CGTTCCACAATATAGTGCGCC 59.739 52.381 4.18 0.00 38.18 6.53
3719 3898 1.602377 GTTCCACAATATAGTGCGCCC 59.398 52.381 4.18 0.00 38.18 6.13
3720 3899 0.249699 TCCACAATATAGTGCGCCCG 60.250 55.000 4.18 0.00 38.18 6.13
3721 3900 0.531974 CCACAATATAGTGCGCCCGT 60.532 55.000 4.18 0.00 38.18 5.28
3722 3901 0.581529 CACAATATAGTGCGCCCGTG 59.418 55.000 4.18 0.00 32.04 4.94
3723 3902 1.157870 ACAATATAGTGCGCCCGTGC 61.158 55.000 4.18 0.00 0.00 5.34
3724 3903 0.880278 CAATATAGTGCGCCCGTGCT 60.880 55.000 4.18 0.00 35.36 4.40
3725 3904 0.179056 AATATAGTGCGCCCGTGCTT 60.179 50.000 4.18 0.00 35.36 3.91
3726 3905 0.179056 ATATAGTGCGCCCGTGCTTT 60.179 50.000 4.18 0.00 35.36 3.51
3727 3906 0.808453 TATAGTGCGCCCGTGCTTTC 60.808 55.000 4.18 0.00 35.36 2.62
3728 3907 2.521958 ATAGTGCGCCCGTGCTTTCT 62.522 55.000 4.18 1.12 35.36 2.52
3729 3908 4.389576 GTGCGCCCGTGCTTTCTG 62.390 66.667 4.18 0.00 35.36 3.02
3730 3909 4.617520 TGCGCCCGTGCTTTCTGA 62.618 61.111 4.18 0.00 35.36 3.27
3731 3910 3.793144 GCGCCCGTGCTTTCTGAG 61.793 66.667 0.00 0.00 34.43 3.35
3732 3911 3.121030 CGCCCGTGCTTTCTGAGG 61.121 66.667 0.00 0.00 34.43 3.86
3733 3912 2.032681 GCCCGTGCTTTCTGAGGT 59.967 61.111 0.00 0.00 33.53 3.85
3734 3913 1.600916 GCCCGTGCTTTCTGAGGTT 60.601 57.895 0.00 0.00 33.53 3.50
3735 3914 1.578206 GCCCGTGCTTTCTGAGGTTC 61.578 60.000 0.00 0.00 33.53 3.62
3736 3915 0.250295 CCCGTGCTTTCTGAGGTTCA 60.250 55.000 0.00 0.00 0.00 3.18
3737 3916 1.593196 CCGTGCTTTCTGAGGTTCAA 58.407 50.000 0.00 0.00 0.00 2.69
3738 3917 1.264288 CCGTGCTTTCTGAGGTTCAAC 59.736 52.381 0.00 0.00 0.00 3.18
3739 3918 2.213499 CGTGCTTTCTGAGGTTCAACT 58.787 47.619 0.00 0.00 0.00 3.16
3740 3919 2.614057 CGTGCTTTCTGAGGTTCAACTT 59.386 45.455 0.00 0.00 0.00 2.66
3741 3920 3.065371 CGTGCTTTCTGAGGTTCAACTTT 59.935 43.478 0.00 0.00 0.00 2.66
3742 3921 4.354587 GTGCTTTCTGAGGTTCAACTTTG 58.645 43.478 0.00 0.00 0.00 2.77
3743 3922 4.096382 GTGCTTTCTGAGGTTCAACTTTGA 59.904 41.667 0.00 0.00 34.92 2.69
3744 3923 4.096382 TGCTTTCTGAGGTTCAACTTTGAC 59.904 41.667 0.00 0.00 36.83 3.18
3745 3924 4.498177 GCTTTCTGAGGTTCAACTTTGACC 60.498 45.833 0.00 0.00 36.83 4.02
3746 3925 3.924114 TCTGAGGTTCAACTTTGACCA 57.076 42.857 11.01 0.54 36.83 4.02
3747 3926 4.437682 TCTGAGGTTCAACTTTGACCAT 57.562 40.909 11.01 0.00 36.83 3.55
3748 3927 5.560722 TCTGAGGTTCAACTTTGACCATA 57.439 39.130 11.01 2.44 36.83 2.74
3749 3928 5.935945 TCTGAGGTTCAACTTTGACCATAA 58.064 37.500 11.01 0.00 36.83 1.90
3750 3929 6.361433 TCTGAGGTTCAACTTTGACCATAAA 58.639 36.000 11.01 0.00 36.83 1.40
3751 3930 7.004086 TCTGAGGTTCAACTTTGACCATAAAT 58.996 34.615 11.01 0.00 36.83 1.40
3752 3931 7.505585 TCTGAGGTTCAACTTTGACCATAAATT 59.494 33.333 11.01 0.00 36.83 1.82
3753 3932 8.017418 TGAGGTTCAACTTTGACCATAAATTT 57.983 30.769 0.00 0.00 36.83 1.82
3754 3933 9.137459 TGAGGTTCAACTTTGACCATAAATTTA 57.863 29.630 0.00 0.00 36.83 1.40
3755 3934 9.974980 GAGGTTCAACTTTGACCATAAATTTAA 57.025 29.630 1.21 0.00 36.83 1.52
3756 3935 9.758651 AGGTTCAACTTTGACCATAAATTTAAC 57.241 29.630 1.21 0.00 36.83 2.01
3757 3936 8.984764 GGTTCAACTTTGACCATAAATTTAACC 58.015 33.333 1.21 0.00 36.83 2.85
3758 3937 9.535878 GTTCAACTTTGACCATAAATTTAACCA 57.464 29.630 1.21 0.00 36.83 3.67
3760 3939 9.535878 TCAACTTTGACCATAAATTTAACCAAC 57.464 29.630 1.21 0.00 31.01 3.77
3761 3940 8.484008 CAACTTTGACCATAAATTTAACCAACG 58.516 33.333 1.21 5.06 0.00 4.10
3762 3941 7.942990 ACTTTGACCATAAATTTAACCAACGA 58.057 30.769 1.21 0.00 0.00 3.85
3763 3942 8.079809 ACTTTGACCATAAATTTAACCAACGAG 58.920 33.333 1.21 3.35 0.00 4.18
3764 3943 7.747155 TTGACCATAAATTTAACCAACGAGA 57.253 32.000 1.21 0.00 0.00 4.04
3765 3944 7.136289 TGACCATAAATTTAACCAACGAGAC 57.864 36.000 1.21 0.00 0.00 3.36
3766 3945 6.149807 TGACCATAAATTTAACCAACGAGACC 59.850 38.462 1.21 0.00 0.00 3.85
3767 3946 5.122711 ACCATAAATTTAACCAACGAGACCG 59.877 40.000 1.21 0.00 42.50 4.79
3768 3947 5.352016 CCATAAATTTAACCAACGAGACCGA 59.648 40.000 1.21 0.00 39.50 4.69
3769 3948 4.737353 AAATTTAACCAACGAGACCGAC 57.263 40.909 0.00 0.00 39.50 4.79
3770 3949 3.672767 ATTTAACCAACGAGACCGACT 57.327 42.857 0.00 0.00 39.50 4.18
3771 3950 2.427232 TTAACCAACGAGACCGACTG 57.573 50.000 0.00 0.00 39.50 3.51
3772 3951 0.038892 TAACCAACGAGACCGACTGC 60.039 55.000 0.00 0.00 39.50 4.40
3773 3952 2.805353 CCAACGAGACCGACTGCG 60.805 66.667 0.00 0.00 39.50 5.18
3835 4014 9.661563 TGAATACGAATTCACTGGTATAACTTT 57.338 29.630 6.22 0.00 45.17 2.66
3838 4017 6.608610 ACGAATTCACTGGTATAACTTTTGC 58.391 36.000 6.22 0.00 0.00 3.68
3839 4018 6.430000 ACGAATTCACTGGTATAACTTTTGCT 59.570 34.615 6.22 0.00 0.00 3.91
3840 4019 6.961554 CGAATTCACTGGTATAACTTTTGCTC 59.038 38.462 6.22 0.00 0.00 4.26
3841 4020 6.759497 ATTCACTGGTATAACTTTTGCTCC 57.241 37.500 0.00 0.00 0.00 4.70
3842 4021 4.585879 TCACTGGTATAACTTTTGCTCCC 58.414 43.478 0.00 0.00 0.00 4.30
3843 4022 3.374058 CACTGGTATAACTTTTGCTCCCG 59.626 47.826 0.00 0.00 0.00 5.14
3844 4023 2.354821 CTGGTATAACTTTTGCTCCCGC 59.645 50.000 0.00 0.00 0.00 6.13
3845 4024 2.026636 TGGTATAACTTTTGCTCCCGCT 60.027 45.455 0.00 0.00 36.97 5.52
3846 4025 2.354821 GGTATAACTTTTGCTCCCGCTG 59.645 50.000 0.00 0.00 36.97 5.18
3847 4026 0.811281 ATAACTTTTGCTCCCGCTGC 59.189 50.000 0.00 0.00 36.97 5.25
3848 4027 0.250727 TAACTTTTGCTCCCGCTGCT 60.251 50.000 0.00 0.00 36.97 4.24
3849 4028 1.799258 AACTTTTGCTCCCGCTGCTG 61.799 55.000 0.00 0.00 36.97 4.41
3850 4029 2.203337 TTTTGCTCCCGCTGCTGT 60.203 55.556 0.00 0.00 36.97 4.40
3851 4030 1.799258 CTTTTGCTCCCGCTGCTGTT 61.799 55.000 0.00 0.00 36.97 3.16
3852 4031 2.074230 TTTTGCTCCCGCTGCTGTTG 62.074 55.000 0.00 0.00 36.97 3.33
3855 4034 2.281761 CTCCCGCTGCTGTTGGTT 60.282 61.111 0.00 0.00 0.00 3.67
3856 4035 1.003839 CTCCCGCTGCTGTTGGTTA 60.004 57.895 0.00 0.00 0.00 2.85
3857 4036 0.605319 CTCCCGCTGCTGTTGGTTAA 60.605 55.000 0.00 0.00 0.00 2.01
3858 4037 0.179015 TCCCGCTGCTGTTGGTTAAA 60.179 50.000 0.00 0.00 0.00 1.52
3859 4038 0.887933 CCCGCTGCTGTTGGTTAAAT 59.112 50.000 0.00 0.00 0.00 1.40
3860 4039 1.272212 CCCGCTGCTGTTGGTTAAATT 59.728 47.619 0.00 0.00 0.00 1.82
3861 4040 2.288763 CCCGCTGCTGTTGGTTAAATTT 60.289 45.455 0.00 0.00 0.00 1.82
3862 4041 3.057174 CCCGCTGCTGTTGGTTAAATTTA 60.057 43.478 0.00 0.00 0.00 1.40
3863 4042 4.381505 CCCGCTGCTGTTGGTTAAATTTAT 60.382 41.667 0.00 0.00 0.00 1.40
3864 4043 4.562394 CCGCTGCTGTTGGTTAAATTTATG 59.438 41.667 0.00 0.00 0.00 1.90
3865 4044 4.562394 CGCTGCTGTTGGTTAAATTTATGG 59.438 41.667 0.00 0.00 0.00 2.74
3866 4045 5.478407 GCTGCTGTTGGTTAAATTTATGGT 58.522 37.500 0.00 0.00 0.00 3.55
3867 4046 5.576774 GCTGCTGTTGGTTAAATTTATGGTC 59.423 40.000 0.00 0.00 0.00 4.02
3868 4047 6.656632 TGCTGTTGGTTAAATTTATGGTCA 57.343 33.333 0.00 0.00 0.00 4.02
3869 4048 7.055667 TGCTGTTGGTTAAATTTATGGTCAA 57.944 32.000 0.00 0.00 0.00 3.18
3870 4049 7.500992 TGCTGTTGGTTAAATTTATGGTCAAA 58.499 30.769 0.00 0.00 0.00 2.69
3871 4050 7.655328 TGCTGTTGGTTAAATTTATGGTCAAAG 59.345 33.333 0.00 4.51 0.00 2.77
3872 4051 7.655732 GCTGTTGGTTAAATTTATGGTCAAAGT 59.344 33.333 0.00 0.00 0.00 2.66
3873 4052 9.541143 CTGTTGGTTAAATTTATGGTCAAAGTT 57.459 29.630 0.00 0.00 31.36 2.66
3874 4053 9.319143 TGTTGGTTAAATTTATGGTCAAAGTTG 57.681 29.630 0.00 0.00 29.44 3.16
3875 4054 9.535878 GTTGGTTAAATTTATGGTCAAAGTTGA 57.464 29.630 0.00 0.00 34.20 3.18
3877 4056 9.757227 TGGTTAAATTTATGGTCAAAGTTGAAG 57.243 29.630 0.00 0.00 39.21 3.02
3878 4057 8.708742 GGTTAAATTTATGGTCAAAGTTGAAGC 58.291 33.333 0.00 0.00 39.21 3.86
3879 4058 9.255304 GTTAAATTTATGGTCAAAGTTGAAGCA 57.745 29.630 0.00 0.00 39.21 3.91
3880 4059 7.713764 AAATTTATGGTCAAAGTTGAAGCAC 57.286 32.000 0.00 0.00 39.21 4.40
3881 4060 4.481930 TTATGGTCAAAGTTGAAGCACG 57.518 40.909 0.00 0.00 39.21 5.34
3882 4061 1.021202 TGGTCAAAGTTGAAGCACGG 58.979 50.000 0.00 0.00 39.21 4.94
3883 4062 0.310854 GGTCAAAGTTGAAGCACGGG 59.689 55.000 0.00 0.00 39.21 5.28
3884 4063 1.305201 GTCAAAGTTGAAGCACGGGA 58.695 50.000 0.00 0.00 39.21 5.14
3885 4064 1.673920 GTCAAAGTTGAAGCACGGGAA 59.326 47.619 0.00 0.00 39.21 3.97
3886 4065 1.673920 TCAAAGTTGAAGCACGGGAAC 59.326 47.619 0.00 0.00 33.55 3.62
3887 4066 3.583024 TCAAAGTTGAAGCACGGGAACC 61.583 50.000 0.00 0.00 38.90 3.62
3898 4077 3.692406 GGGAACCGAGGACGCACT 61.692 66.667 0.00 0.00 40.86 4.40
3899 4078 2.345760 GGGAACCGAGGACGCACTA 61.346 63.158 0.00 0.00 40.86 2.74
3900 4079 1.673808 GGGAACCGAGGACGCACTAT 61.674 60.000 0.00 0.00 40.86 2.12
3901 4080 1.027357 GGAACCGAGGACGCACTATA 58.973 55.000 0.00 0.00 38.29 1.31
3902 4081 1.612463 GGAACCGAGGACGCACTATAT 59.388 52.381 0.00 0.00 38.29 0.86
3903 4082 2.035576 GGAACCGAGGACGCACTATATT 59.964 50.000 0.00 0.00 38.29 1.28
3904 4083 3.492137 GGAACCGAGGACGCACTATATTT 60.492 47.826 0.00 0.00 38.29 1.40
3905 4084 3.814005 ACCGAGGACGCACTATATTTT 57.186 42.857 0.00 0.00 38.29 1.82
3906 4085 3.454375 ACCGAGGACGCACTATATTTTG 58.546 45.455 0.00 0.00 38.29 2.44
3907 4086 2.800544 CCGAGGACGCACTATATTTTGG 59.199 50.000 0.00 0.00 38.29 3.28
3908 4087 3.491964 CCGAGGACGCACTATATTTTGGA 60.492 47.826 0.00 0.00 38.29 3.53
3909 4088 4.116961 CGAGGACGCACTATATTTTGGAA 58.883 43.478 0.00 0.00 0.00 3.53
3910 4089 4.025979 CGAGGACGCACTATATTTTGGAAC 60.026 45.833 0.00 0.00 0.00 3.62
3911 4090 3.869246 AGGACGCACTATATTTTGGAACG 59.131 43.478 0.00 0.00 0.00 3.95
3912 4091 3.001939 GGACGCACTATATTTTGGAACGG 59.998 47.826 0.00 0.00 0.00 4.44
3913 4092 3.864243 ACGCACTATATTTTGGAACGGA 58.136 40.909 0.00 0.00 0.00 4.69
3914 4093 3.869246 ACGCACTATATTTTGGAACGGAG 59.131 43.478 0.00 0.00 0.00 4.63
3915 4094 3.247648 CGCACTATATTTTGGAACGGAGG 59.752 47.826 0.00 0.00 0.00 4.30
3916 4095 3.564225 GCACTATATTTTGGAACGGAGGG 59.436 47.826 0.00 0.00 0.00 4.30
3917 4096 4.685030 GCACTATATTTTGGAACGGAGGGA 60.685 45.833 0.00 0.00 0.00 4.20
3918 4097 5.621193 CACTATATTTTGGAACGGAGGGAT 58.379 41.667 0.00 0.00 0.00 3.85
4045 4224 5.534207 TGGAGTTGCTGAAATCAAATGTT 57.466 34.783 0.00 0.00 0.00 2.71
4050 4229 5.235616 AGTTGCTGAAATCAAATGTTTGCAG 59.764 36.000 7.55 7.55 38.05 4.41
4055 4234 6.457257 GCTGAAATCAAATGTTTGCAGTTTGT 60.457 34.615 11.87 2.77 38.05 2.83
4094 4273 6.358118 TGTTCTTCATGTGTAACTGACAAC 57.642 37.500 0.00 0.00 40.66 3.32
4118 4297 7.734942 ACTAGCAAAAGGGAAAAATGATTCAA 58.265 30.769 0.00 0.00 0.00 2.69
4120 4299 9.874205 CTAGCAAAAGGGAAAAATGATTCAATA 57.126 29.630 0.00 0.00 0.00 1.90
4122 4301 9.169592 AGCAAAAGGGAAAAATGATTCAATATG 57.830 29.630 0.00 0.00 0.00 1.78
4143 4345 3.244526 TGTGAGTACATTGTCATGCACCT 60.245 43.478 0.00 0.00 33.05 4.00
4169 4371 5.909610 GTGTGTTCTCTGTAAACATTTGAGC 59.090 40.000 0.00 0.00 38.75 4.26
4172 4374 6.017934 GTGTTCTCTGTAAACATTTGAGCTGA 60.018 38.462 0.00 0.00 38.75 4.26
4180 4391 7.884257 TGTAAACATTTGAGCTGATGAAATGA 58.116 30.769 21.38 0.08 38.72 2.57
4248 4463 1.790818 CCTTGGTAGGTACTCCCTCC 58.209 60.000 0.00 0.00 44.81 4.30
4249 4464 1.400737 CTTGGTAGGTACTCCCTCCG 58.599 60.000 0.00 0.00 44.81 4.63
4250 4465 0.706433 TTGGTAGGTACTCCCTCCGT 59.294 55.000 0.00 0.00 44.81 4.69
4251 4466 0.706433 TGGTAGGTACTCCCTCCGTT 59.294 55.000 0.00 0.00 44.81 4.44
4252 4467 1.341383 TGGTAGGTACTCCCTCCGTTC 60.341 57.143 0.00 0.00 44.81 3.95
4253 4468 1.397672 GTAGGTACTCCCTCCGTTCC 58.602 60.000 0.00 0.00 44.81 3.62
4254 4469 1.002069 TAGGTACTCCCTCCGTTCCA 58.998 55.000 0.00 0.00 44.81 3.53
4255 4470 0.115745 AGGTACTCCCTCCGTTCCAA 59.884 55.000 0.00 0.00 40.71 3.53
4256 4471 0.978907 GGTACTCCCTCCGTTCCAAA 59.021 55.000 0.00 0.00 0.00 3.28
4257 4472 1.348696 GGTACTCCCTCCGTTCCAAAA 59.651 52.381 0.00 0.00 0.00 2.44
4258 4473 2.026542 GGTACTCCCTCCGTTCCAAAAT 60.027 50.000 0.00 0.00 0.00 1.82
4259 4474 3.198417 GGTACTCCCTCCGTTCCAAAATA 59.802 47.826 0.00 0.00 0.00 1.40
4260 4475 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
4261 4476 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
4262 4477 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
4263 4478 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
4264 4479 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
4265 4480 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
4266 4481 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
4267 4482 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
4268 4483 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
4269 4484 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
4270 4485 6.414732 TCCGTTCCAAAATAGATGACTCAAT 58.585 36.000 0.00 0.00 0.00 2.57
4271 4486 7.561251 TCCGTTCCAAAATAGATGACTCAATA 58.439 34.615 0.00 0.00 0.00 1.90
4272 4487 8.044309 TCCGTTCCAAAATAGATGACTCAATAA 58.956 33.333 0.00 0.00 0.00 1.40
4273 4488 8.673711 CCGTTCCAAAATAGATGACTCAATAAA 58.326 33.333 0.00 0.00 0.00 1.40
4274 4489 9.708222 CGTTCCAAAATAGATGACTCAATAAAG 57.292 33.333 0.00 0.00 0.00 1.85
4303 4518 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
4304 4519 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
4305 4520 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
4306 4521 9.082313 ACAAAGTTGAGTCATCTATTTTGGAAT 57.918 29.630 14.35 0.00 40.00 3.01
4386 4637 4.729227 TTGACTGCATAGTATTCCACGA 57.271 40.909 0.00 0.00 37.25 4.35
4432 4683 2.025037 TCCCATTATTGCAGAGGCTGTT 60.025 45.455 0.00 0.00 41.91 3.16
4518 4769 0.937441 AGGACTCATGGGAGGAGCTA 59.063 55.000 0.00 0.00 45.81 3.32
4527 4778 1.199615 GGGAGGAGCTAGAAGCAGTT 58.800 55.000 1.22 0.00 45.56 3.16
4533 4784 4.512484 AGGAGCTAGAAGCAGTTGATTTC 58.488 43.478 1.22 0.00 45.56 2.17
4593 4844 0.723981 GCATGCAAGTTCTCTCGTCC 59.276 55.000 14.21 0.00 0.00 4.79
4654 4905 4.183865 GCCCCTTATGTTTCATCTTTTGC 58.816 43.478 0.00 0.00 0.00 3.68
4655 4906 4.322650 GCCCCTTATGTTTCATCTTTTGCA 60.323 41.667 0.00 0.00 0.00 4.08
4737 4991 0.458889 TTATCGTCAACCCGAAGCCG 60.459 55.000 0.00 0.00 40.73 5.52
4767 5021 0.252284 ACCTCGGTGGATCCAAGACT 60.252 55.000 18.20 2.39 39.71 3.24
4771 5025 0.176680 CGGTGGATCCAAGACTCCAG 59.823 60.000 18.20 5.97 42.10 3.86
4789 5043 1.444895 GGTGAAGCATTGGCAAGCG 60.445 57.895 5.96 0.08 44.61 4.68
4803 5057 1.992170 CAAGCGTACCACTAGACCAC 58.008 55.000 0.00 0.00 0.00 4.16
4824 5078 3.056749 ACTCCGTGGTAGAAGACATTGAC 60.057 47.826 0.00 0.00 0.00 3.18
4886 5140 0.747283 GCTGCTCCACCTCATCCAAG 60.747 60.000 0.00 0.00 0.00 3.61
4929 5183 1.323271 CGGAGAGGTTCAGGCTAGCA 61.323 60.000 18.24 0.00 0.00 3.49
5144 5398 8.244113 GGTTGTCTAAATACAAGGGAAGAAATG 58.756 37.037 0.00 0.00 39.92 2.32
5146 5400 7.175104 TGTCTAAATACAAGGGAAGAAATGCT 58.825 34.615 0.00 0.00 0.00 3.79
5147 5401 7.121168 TGTCTAAATACAAGGGAAGAAATGCTG 59.879 37.037 0.00 0.00 0.00 4.41
5150 5404 1.147817 ACAAGGGAAGAAATGCTGGGT 59.852 47.619 0.00 0.00 0.00 4.51
5159 5449 5.279456 GGAAGAAATGCTGGGTTGTAACAAT 60.279 40.000 0.00 0.00 0.00 2.71
5160 5450 5.138125 AGAAATGCTGGGTTGTAACAATG 57.862 39.130 0.00 0.00 0.00 2.82
5163 5453 3.168035 TGCTGGGTTGTAACAATGGAT 57.832 42.857 0.00 0.00 0.00 3.41
5166 5456 3.509575 GCTGGGTTGTAACAATGGATCAA 59.490 43.478 0.00 0.00 0.00 2.57
5174 5464 5.904941 TGTAACAATGGATCAATTGCATCC 58.095 37.500 20.77 20.99 40.54 3.51
5242 5532 3.503748 ACTGAAGCAGTTTTGTATGAGCC 59.496 43.478 0.00 0.00 42.59 4.70
5260 5550 1.001378 GCCTTGTGCTCGTGATGTTTT 60.001 47.619 0.00 0.00 36.87 2.43
5264 5554 5.088739 CCTTGTGCTCGTGATGTTTTATTC 58.911 41.667 0.00 0.00 0.00 1.75
5281 5604 8.387354 TGTTTTATTCTGTGTACATATGCTTCG 58.613 33.333 1.58 0.00 0.00 3.79
5282 5605 6.525121 TTATTCTGTGTACATATGCTTCGC 57.475 37.500 1.58 1.16 0.00 4.70
5284 5607 2.098443 TCTGTGTACATATGCTTCGCGA 59.902 45.455 3.71 3.71 0.00 5.87
5285 5608 3.052745 CTGTGTACATATGCTTCGCGAT 58.947 45.455 10.88 0.00 0.00 4.58
5312 5638 5.682234 TGGTAGAGCAATCAGAGATGAAA 57.318 39.130 0.00 0.00 0.00 2.69
5314 5640 6.475504 TGGTAGAGCAATCAGAGATGAAAAA 58.524 36.000 0.00 0.00 0.00 1.94
5315 5641 7.114754 TGGTAGAGCAATCAGAGATGAAAAAT 58.885 34.615 0.00 0.00 0.00 1.82
5316 5642 7.066645 TGGTAGAGCAATCAGAGATGAAAAATG 59.933 37.037 0.00 0.00 0.00 2.32
5318 5644 7.698506 AGAGCAATCAGAGATGAAAAATGAA 57.301 32.000 0.00 0.00 0.00 2.57
5430 5819 0.178992 CTCCCAAGGTTGCACTTCCA 60.179 55.000 0.00 0.00 0.00 3.53
5450 5841 4.402155 TCCAACATCTGAAAAAGTTGCAGT 59.598 37.500 0.00 0.00 39.86 4.40
5502 5904 1.254284 ACGAAGCCTAGACAGCAGCT 61.254 55.000 0.00 0.00 37.10 4.24
5526 5929 1.571460 GCACAGCAGTTGGTCTTCG 59.429 57.895 0.00 0.00 0.00 3.79
5528 5931 1.598130 ACAGCAGTTGGTCTTCGGC 60.598 57.895 0.00 0.00 0.00 5.54
5530 5933 1.598130 AGCAGTTGGTCTTCGGCAC 60.598 57.895 0.00 0.00 0.00 5.01
5578 5982 3.499737 GCGAACGCATCCCCACAG 61.500 66.667 14.26 0.00 41.49 3.66
5579 5983 3.499737 CGAACGCATCCCCACAGC 61.500 66.667 0.00 0.00 0.00 4.40
5585 5989 4.415150 CATCCCCACAGCGGCAGT 62.415 66.667 1.45 0.00 0.00 4.40
5586 5990 4.415150 ATCCCCACAGCGGCAGTG 62.415 66.667 17.46 17.46 36.76 3.66
5596 6000 4.320456 CGGCAGTGGCACAGGAGT 62.320 66.667 21.41 0.00 41.80 3.85
5597 6001 2.359230 GGCAGTGGCACAGGAGTC 60.359 66.667 21.41 4.30 41.80 3.36
5598 6002 2.746359 GCAGTGGCACAGGAGTCT 59.254 61.111 21.41 0.00 41.80 3.24
5599 6003 1.544825 GGCAGTGGCACAGGAGTCTA 61.545 60.000 21.41 0.00 41.80 2.59
5600 6004 0.390472 GCAGTGGCACAGGAGTCTAC 60.390 60.000 21.41 0.00 41.80 2.59
5601 6005 0.247736 CAGTGGCACAGGAGTCTACC 59.752 60.000 21.41 0.00 41.80 3.18
5602 6006 1.215647 GTGGCACAGGAGTCTACCG 59.784 63.158 13.86 0.00 41.80 4.02
5603 6007 1.982395 TGGCACAGGAGTCTACCGG 60.982 63.158 0.00 0.00 34.73 5.28
5604 6008 2.184579 GCACAGGAGTCTACCGGC 59.815 66.667 0.00 0.00 34.73 6.13
5605 6009 2.893398 CACAGGAGTCTACCGGCC 59.107 66.667 0.00 0.00 34.73 6.13
5606 6010 2.754658 ACAGGAGTCTACCGGCCG 60.755 66.667 21.04 21.04 34.73 6.13
5607 6011 3.528370 CAGGAGTCTACCGGCCGG 61.528 72.222 42.17 42.17 42.03 6.13
5836 6276 4.821589 GACAAGGGAGCGGGCGAG 62.822 72.222 0.00 0.00 0.00 5.03
5949 6389 1.671379 GGAGGAAGCGGTTGTGGTC 60.671 63.158 3.70 0.00 0.00 4.02
5950 6390 2.027625 GAGGAAGCGGTTGTGGTCG 61.028 63.158 3.70 0.00 0.00 4.79
6046 6489 3.499737 GATCTGGGCGCGGTTGTG 61.500 66.667 8.83 0.00 0.00 3.33
6052 6495 3.370231 GGCGCGGTTGTGGGATTT 61.370 61.111 8.83 0.00 0.00 2.17
6053 6496 2.126502 GCGCGGTTGTGGGATTTG 60.127 61.111 8.83 0.00 0.00 2.32
6054 6497 2.566010 CGCGGTTGTGGGATTTGG 59.434 61.111 0.00 0.00 0.00 3.28
6055 6498 2.969827 GCGGTTGTGGGATTTGGG 59.030 61.111 0.00 0.00 0.00 4.12
6075 6987 3.984749 CGGGTTTTTGGTGCGGGG 61.985 66.667 0.00 0.00 0.00 5.73
6102 7014 3.462501 GGGAGAGGGGAGGGGGAT 61.463 72.222 0.00 0.00 0.00 3.85
6108 7020 4.223426 GGGGAGGGGGATGGGGAT 62.223 72.222 0.00 0.00 0.00 3.85
6109 7021 2.824856 GGGGAGGGGGATGGGGATA 61.825 68.421 0.00 0.00 0.00 2.59
6177 7089 1.078823 GGGAGGGAAATTGGAAAGGGT 59.921 52.381 0.00 0.00 0.00 4.34
6188 7100 1.541620 GAAAGGGTGGGAGGGAGGT 60.542 63.158 0.00 0.00 0.00 3.85
6189 7101 1.852626 AAAGGGTGGGAGGGAGGTG 60.853 63.158 0.00 0.00 0.00 4.00
6190 7102 2.654599 AAAGGGTGGGAGGGAGGTGT 62.655 60.000 0.00 0.00 0.00 4.16
6191 7103 3.009714 GGGTGGGAGGGAGGTGTC 61.010 72.222 0.00 0.00 0.00 3.67
6192 7104 2.203938 GGTGGGAGGGAGGTGTCA 60.204 66.667 0.00 0.00 0.00 3.58
6193 7105 2.593956 GGTGGGAGGGAGGTGTCAC 61.594 68.421 0.00 0.00 0.00 3.67
6194 7106 2.603473 TGGGAGGGAGGTGTCACG 60.603 66.667 0.00 0.00 0.00 4.35
6195 7107 4.083862 GGGAGGGAGGTGTCACGC 62.084 72.222 0.00 0.00 0.00 5.34
6221 7133 3.636231 CTGACAAGGGGGCGGACA 61.636 66.667 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 5.210715 CAGCTCTTTAGTCAAGCAGTTTTG 58.789 41.667 0.00 0.00 38.51 2.44
3 4 4.261363 GCAGCTCTTTAGTCAAGCAGTTTT 60.261 41.667 0.00 0.00 38.51 2.43
5 6 2.810852 GCAGCTCTTTAGTCAAGCAGTT 59.189 45.455 0.00 0.00 38.51 3.16
7 8 2.415857 CAGCAGCTCTTTAGTCAAGCAG 59.584 50.000 0.00 0.00 38.51 4.24
8 9 2.420642 CAGCAGCTCTTTAGTCAAGCA 58.579 47.619 0.00 0.00 38.51 3.91
9 10 1.736681 CCAGCAGCTCTTTAGTCAAGC 59.263 52.381 0.00 0.00 36.27 4.01
10 11 3.051081 ACCAGCAGCTCTTTAGTCAAG 57.949 47.619 0.00 0.00 0.00 3.02
11 12 3.492102 AACCAGCAGCTCTTTAGTCAA 57.508 42.857 0.00 0.00 0.00 3.18
12 13 3.492102 AAACCAGCAGCTCTTTAGTCA 57.508 42.857 0.00 0.00 0.00 3.41
13 14 6.477360 GTCTATAAACCAGCAGCTCTTTAGTC 59.523 42.308 0.00 0.00 0.00 2.59
14 15 6.070767 TGTCTATAAACCAGCAGCTCTTTAGT 60.071 38.462 0.00 0.00 0.00 2.24
15 16 6.341316 TGTCTATAAACCAGCAGCTCTTTAG 58.659 40.000 0.00 0.00 0.00 1.85
16 17 6.294361 TGTCTATAAACCAGCAGCTCTTTA 57.706 37.500 0.00 0.00 0.00 1.85
17 18 5.165961 TGTCTATAAACCAGCAGCTCTTT 57.834 39.130 0.00 0.00 0.00 2.52
18 19 4.826274 TGTCTATAAACCAGCAGCTCTT 57.174 40.909 0.00 0.00 0.00 2.85
19 20 6.678568 ATATGTCTATAAACCAGCAGCTCT 57.321 37.500 0.00 0.00 0.00 4.09
20 21 7.872993 TGTAATATGTCTATAAACCAGCAGCTC 59.127 37.037 0.00 0.00 0.00 4.09
21 22 7.735917 TGTAATATGTCTATAAACCAGCAGCT 58.264 34.615 0.00 0.00 0.00 4.24
22 23 7.962964 TGTAATATGTCTATAAACCAGCAGC 57.037 36.000 0.00 0.00 0.00 5.25
23 24 8.499162 GCTTGTAATATGTCTATAAACCAGCAG 58.501 37.037 0.00 0.00 32.99 4.24
24 25 7.990314 TGCTTGTAATATGTCTATAAACCAGCA 59.010 33.333 0.00 0.00 36.38 4.41
25 26 8.378172 TGCTTGTAATATGTCTATAAACCAGC 57.622 34.615 0.00 0.00 33.16 4.85
26 27 9.764363 TCTGCTTGTAATATGTCTATAAACCAG 57.236 33.333 0.00 0.00 0.00 4.00
31 32 9.261180 GCAGTTCTGCTTGTAATATGTCTATAA 57.739 33.333 16.29 0.00 0.00 0.98
32 33 8.642432 AGCAGTTCTGCTTGTAATATGTCTATA 58.358 33.333 19.80 0.00 43.52 1.31
33 34 7.440556 CAGCAGTTCTGCTTGTAATATGTCTAT 59.559 37.037 22.40 0.00 43.52 1.98
34 35 6.758416 CAGCAGTTCTGCTTGTAATATGTCTA 59.242 38.462 22.40 0.00 43.52 2.59
35 36 5.583854 CAGCAGTTCTGCTTGTAATATGTCT 59.416 40.000 22.40 0.00 43.52 3.41
36 37 5.804173 CAGCAGTTCTGCTTGTAATATGTC 58.196 41.667 22.40 0.00 43.52 3.06
37 38 5.808042 CAGCAGTTCTGCTTGTAATATGT 57.192 39.130 22.40 0.00 43.52 2.29
49 50 2.072298 GTTCTGTAGGCAGCAGTTCTG 58.928 52.381 0.00 0.00 45.62 3.02
50 51 1.002544 GGTTCTGTAGGCAGCAGTTCT 59.997 52.381 0.00 0.00 42.29 3.01
51 52 1.443802 GGTTCTGTAGGCAGCAGTTC 58.556 55.000 0.00 3.75 42.29 3.01
52 53 0.320771 CGGTTCTGTAGGCAGCAGTT 60.321 55.000 0.00 0.00 42.29 3.16
53 54 1.293498 CGGTTCTGTAGGCAGCAGT 59.707 57.895 0.00 0.00 42.29 4.40
54 55 2.103042 GCGGTTCTGTAGGCAGCAG 61.103 63.158 0.00 2.48 42.29 4.24
55 56 2.047274 GCGGTTCTGTAGGCAGCA 60.047 61.111 0.00 0.00 42.29 4.41
56 57 2.103042 CAGCGGTTCTGTAGGCAGC 61.103 63.158 0.00 0.00 42.29 5.25
57 58 1.448540 CCAGCGGTTCTGTAGGCAG 60.449 63.158 0.00 0.00 41.25 4.85
58 59 1.764571 AACCAGCGGTTCTGTAGGCA 61.765 55.000 7.08 0.00 43.05 4.75
59 60 0.248289 TAACCAGCGGTTCTGTAGGC 59.752 55.000 14.79 0.00 43.05 3.93
60 61 2.981859 ATAACCAGCGGTTCTGTAGG 57.018 50.000 14.79 0.00 43.05 3.18
61 62 4.097437 TGTCTATAACCAGCGGTTCTGTAG 59.903 45.833 14.79 14.44 43.05 2.74
62 63 4.018490 TGTCTATAACCAGCGGTTCTGTA 58.982 43.478 14.79 7.66 43.05 2.74
63 64 2.829720 TGTCTATAACCAGCGGTTCTGT 59.170 45.455 14.79 7.04 43.05 3.41
64 65 3.520290 TGTCTATAACCAGCGGTTCTG 57.480 47.619 14.79 8.03 43.05 3.02
65 66 6.420913 AATATGTCTATAACCAGCGGTTCT 57.579 37.500 14.79 9.22 43.05 3.01
66 67 6.704493 TGAAATATGTCTATAACCAGCGGTTC 59.296 38.462 14.79 3.51 43.05 3.62
68 69 6.169557 TGAAATATGTCTATAACCAGCGGT 57.830 37.500 0.00 0.00 37.65 5.68
69 70 6.147821 CCTTGAAATATGTCTATAACCAGCGG 59.852 42.308 0.00 0.00 0.00 5.52
70 71 6.929049 TCCTTGAAATATGTCTATAACCAGCG 59.071 38.462 0.00 0.00 0.00 5.18
71 72 8.677148 TTCCTTGAAATATGTCTATAACCAGC 57.323 34.615 0.00 0.00 0.00 4.85
77 78 9.905713 AGCAGTTTTCCTTGAAATATGTCTATA 57.094 29.630 0.00 0.00 31.34 1.31
78 79 8.680903 CAGCAGTTTTCCTTGAAATATGTCTAT 58.319 33.333 0.00 0.00 31.34 1.98
79 80 7.121168 CCAGCAGTTTTCCTTGAAATATGTCTA 59.879 37.037 0.00 0.00 31.34 2.59
80 81 6.071728 CCAGCAGTTTTCCTTGAAATATGTCT 60.072 38.462 0.00 0.00 31.34 3.41
81 82 6.095377 CCAGCAGTTTTCCTTGAAATATGTC 58.905 40.000 0.00 0.00 31.34 3.06
82 83 5.539955 ACCAGCAGTTTTCCTTGAAATATGT 59.460 36.000 0.00 0.00 31.34 2.29
83 84 5.865552 CACCAGCAGTTTTCCTTGAAATATG 59.134 40.000 0.00 0.00 31.34 1.78
84 85 5.047092 CCACCAGCAGTTTTCCTTGAAATAT 60.047 40.000 0.00 0.00 31.34 1.28
85 86 4.280677 CCACCAGCAGTTTTCCTTGAAATA 59.719 41.667 0.00 0.00 31.34 1.40
86 87 3.070015 CCACCAGCAGTTTTCCTTGAAAT 59.930 43.478 0.00 0.00 31.34 2.17
87 88 2.430332 CCACCAGCAGTTTTCCTTGAAA 59.570 45.455 0.00 0.00 0.00 2.69
88 89 2.031120 CCACCAGCAGTTTTCCTTGAA 58.969 47.619 0.00 0.00 0.00 2.69
89 90 1.064017 ACCACCAGCAGTTTTCCTTGA 60.064 47.619 0.00 0.00 0.00 3.02
90 91 1.402787 ACCACCAGCAGTTTTCCTTG 58.597 50.000 0.00 0.00 0.00 3.61
91 92 3.306472 TTACCACCAGCAGTTTTCCTT 57.694 42.857 0.00 0.00 0.00 3.36
92 93 3.525800 ATTACCACCAGCAGTTTTCCT 57.474 42.857 0.00 0.00 0.00 3.36
93 94 3.128764 GCTATTACCACCAGCAGTTTTCC 59.871 47.826 0.00 0.00 35.35 3.13
94 95 3.128764 GGCTATTACCACCAGCAGTTTTC 59.871 47.826 0.00 0.00 37.02 2.29
95 96 3.089284 GGCTATTACCACCAGCAGTTTT 58.911 45.455 0.00 0.00 37.02 2.43
96 97 2.308866 AGGCTATTACCACCAGCAGTTT 59.691 45.455 0.00 0.00 37.02 2.66
97 98 1.916181 AGGCTATTACCACCAGCAGTT 59.084 47.619 0.00 0.00 37.02 3.16
98 99 1.584724 AGGCTATTACCACCAGCAGT 58.415 50.000 0.00 0.00 37.02 4.40
99 100 2.717639 AAGGCTATTACCACCAGCAG 57.282 50.000 0.00 0.00 37.02 4.24
100 101 3.072476 GGATAAGGCTATTACCACCAGCA 59.928 47.826 0.00 0.00 37.02 4.41
101 102 3.328050 AGGATAAGGCTATTACCACCAGC 59.672 47.826 0.00 0.00 34.48 4.85
102 103 5.568620 AAGGATAAGGCTATTACCACCAG 57.431 43.478 0.00 0.00 0.00 4.00
103 104 5.987019 AAAGGATAAGGCTATTACCACCA 57.013 39.130 0.00 0.00 0.00 4.17
104 105 6.602278 AGAAAAGGATAAGGCTATTACCACC 58.398 40.000 0.00 0.00 0.00 4.61
105 106 8.648693 TCTAGAAAAGGATAAGGCTATTACCAC 58.351 37.037 0.00 0.00 0.00 4.16
106 107 8.648693 GTCTAGAAAAGGATAAGGCTATTACCA 58.351 37.037 0.00 0.00 0.00 3.25
107 108 8.648693 TGTCTAGAAAAGGATAAGGCTATTACC 58.351 37.037 0.00 0.00 0.00 2.85
136 137 6.607689 CGTGGATTTGTAAACTTTGCAGATA 58.392 36.000 0.00 0.00 0.00 1.98
148 149 9.676195 CAATAAATGATATGCGTGGATTTGTAA 57.324 29.630 0.00 0.00 0.00 2.41
152 153 7.147312 CACCAATAAATGATATGCGTGGATTT 58.853 34.615 0.00 0.00 0.00 2.17
157 158 4.857799 TGCACCAATAAATGATATGCGTG 58.142 39.130 0.00 0.00 35.92 5.34
159 160 5.978919 AGTTTGCACCAATAAATGATATGCG 59.021 36.000 0.00 0.00 35.92 4.73
160 161 7.775397 AAGTTTGCACCAATAAATGATATGC 57.225 32.000 0.00 0.00 34.61 3.14
187 188 9.973450 ATGTGAGATGATGAACTTACAGTATAC 57.027 33.333 0.00 0.00 36.42 1.47
193 194 8.485392 TGGAATATGTGAGATGATGAACTTACA 58.515 33.333 0.00 0.00 37.13 2.41
237 239 2.162319 TTCAGTGAACATGCGCTGTA 57.838 45.000 9.73 2.50 44.55 2.74
243 245 7.008628 GTGCAGTTAAATATTCAGTGAACATGC 59.991 37.037 7.96 2.94 0.00 4.06
255 257 9.973450 TGTGTAAACAATGTGCAGTTAAATATT 57.027 25.926 0.00 0.00 0.00 1.28
257 259 9.239002 GTTGTGTAAACAATGTGCAGTTAAATA 57.761 29.630 0.83 0.00 31.79 1.40
258 260 7.978975 AGTTGTGTAAACAATGTGCAGTTAAAT 59.021 29.630 0.83 0.00 31.79 1.40
261 263 6.443934 AGTTGTGTAAACAATGTGCAGTTA 57.556 33.333 0.83 0.00 31.79 2.24
290 292 6.986250 TGTGCTACTGGATGTCATATTAGAG 58.014 40.000 0.00 0.00 0.00 2.43
300 302 1.644509 TGTCCTGTGCTACTGGATGT 58.355 50.000 14.60 0.00 45.85 3.06
302 304 1.977854 TGTTGTCCTGTGCTACTGGAT 59.022 47.619 14.60 0.00 45.85 3.41
303 305 1.419381 TGTTGTCCTGTGCTACTGGA 58.581 50.000 9.68 9.68 42.83 3.86
304 306 2.079158 CATGTTGTCCTGTGCTACTGG 58.921 52.381 6.05 6.05 38.41 4.00
305 307 1.466167 GCATGTTGTCCTGTGCTACTG 59.534 52.381 0.00 0.00 34.85 2.74
306 308 1.611673 GGCATGTTGTCCTGTGCTACT 60.612 52.381 0.00 0.00 37.70 2.57
307 309 0.804989 GGCATGTTGTCCTGTGCTAC 59.195 55.000 0.00 0.00 37.70 3.58
308 310 0.673333 CGGCATGTTGTCCTGTGCTA 60.673 55.000 0.00 0.00 37.70 3.49
309 311 1.968017 CGGCATGTTGTCCTGTGCT 60.968 57.895 0.00 0.00 37.70 4.40
310 312 1.308069 ATCGGCATGTTGTCCTGTGC 61.308 55.000 0.00 0.00 36.88 4.57
311 313 0.448990 CATCGGCATGTTGTCCTGTG 59.551 55.000 0.00 0.00 0.00 3.66
312 314 1.308069 GCATCGGCATGTTGTCCTGT 61.308 55.000 0.00 0.00 40.72 4.00
313 315 1.430632 GCATCGGCATGTTGTCCTG 59.569 57.895 0.00 0.00 40.72 3.86
314 316 3.909662 GCATCGGCATGTTGTCCT 58.090 55.556 0.00 0.00 40.72 3.85
324 326 3.419264 TTTTGTGATATGTGCATCGGC 57.581 42.857 0.00 0.00 41.68 5.54
325 327 4.923893 ACATTTTGTGATATGTGCATCGG 58.076 39.130 0.00 0.00 33.90 4.18
326 328 5.909054 GGTACATTTTGTGATATGTGCATCG 59.091 40.000 0.00 0.00 38.58 3.84
327 329 6.794374 TGGTACATTTTGTGATATGTGCATC 58.206 36.000 0.00 0.00 38.58 3.91
328 330 6.602803 TCTGGTACATTTTGTGATATGTGCAT 59.397 34.615 0.00 0.00 38.58 3.96
336 338 8.474025 TGAAACTTTTCTGGTACATTTTGTGAT 58.526 29.630 3.48 0.00 38.20 3.06
342 344 6.463995 TGCTGAAACTTTTCTGGTACATTT 57.536 33.333 9.75 0.00 38.20 2.32
343 345 6.265196 TCATGCTGAAACTTTTCTGGTACATT 59.735 34.615 9.75 0.00 38.20 2.71
346 348 5.689383 TCATGCTGAAACTTTTCTGGTAC 57.311 39.130 9.75 0.00 38.02 3.34
347 349 6.680810 CATTCATGCTGAAACTTTTCTGGTA 58.319 36.000 9.75 1.37 40.12 3.25
348 350 5.535333 CATTCATGCTGAAACTTTTCTGGT 58.465 37.500 9.75 0.00 40.12 4.00
362 364 6.522089 AGATGTGATCTGGGCATTCATGCT 62.522 45.833 11.50 0.00 44.91 3.79
363 365 4.310764 AGATGTGATCTGGGCATTCATGC 61.311 47.826 2.94 2.94 44.86 4.06
364 366 3.487372 AGATGTGATCTGGGCATTCATG 58.513 45.455 0.00 0.00 38.44 3.07
367 413 6.939163 AGTAATTAGATGTGATCTGGGCATTC 59.061 38.462 0.00 0.00 40.51 2.67
376 422 9.442047 CCTTTCCCATAGTAATTAGATGTGATC 57.558 37.037 6.56 0.00 0.00 2.92
384 430 8.774586 CGATGAAACCTTTCCCATAGTAATTAG 58.225 37.037 0.00 0.00 36.36 1.73
385 431 7.227910 GCGATGAAACCTTTCCCATAGTAATTA 59.772 37.037 0.00 0.00 36.36 1.40
387 433 5.531287 GCGATGAAACCTTTCCCATAGTAAT 59.469 40.000 0.00 0.00 36.36 1.89
388 434 4.879545 GCGATGAAACCTTTCCCATAGTAA 59.120 41.667 0.00 0.00 36.36 2.24
390 436 3.279434 GCGATGAAACCTTTCCCATAGT 58.721 45.455 0.00 0.00 36.36 2.12
391 437 3.065371 GTGCGATGAAACCTTTCCCATAG 59.935 47.826 0.00 0.00 36.36 2.23
392 438 3.013921 GTGCGATGAAACCTTTCCCATA 58.986 45.455 0.00 0.00 36.36 2.74
393 439 1.818674 GTGCGATGAAACCTTTCCCAT 59.181 47.619 0.00 0.00 36.36 4.00
394 440 1.243902 GTGCGATGAAACCTTTCCCA 58.756 50.000 0.00 0.00 36.36 4.37
401 458 0.451783 GGACATGGTGCGATGAAACC 59.548 55.000 0.00 0.00 36.96 3.27
405 462 2.170397 ACTTATGGACATGGTGCGATGA 59.830 45.455 0.00 0.00 0.00 2.92
410 467 2.164219 CCACAACTTATGGACATGGTGC 59.836 50.000 0.00 0.00 39.87 5.01
411 468 3.420893 ACCACAACTTATGGACATGGTG 58.579 45.455 0.00 0.00 39.87 4.17
426 483 3.565482 GCATCAGACTCAAGAAACCACAA 59.435 43.478 0.00 0.00 0.00 3.33
428 485 2.485814 GGCATCAGACTCAAGAAACCAC 59.514 50.000 0.00 0.00 0.00 4.16
429 486 2.106338 TGGCATCAGACTCAAGAAACCA 59.894 45.455 0.00 0.00 0.00 3.67
436 493 4.290711 TCAGAAATGGCATCAGACTCAA 57.709 40.909 0.00 0.00 0.00 3.02
440 497 6.855836 TGTAAAATCAGAAATGGCATCAGAC 58.144 36.000 0.00 0.00 0.00 3.51
442 499 6.860080 ACTGTAAAATCAGAAATGGCATCAG 58.140 36.000 0.00 1.59 38.63 2.90
446 503 7.230510 ACAACTACTGTAAAATCAGAAATGGCA 59.769 33.333 0.00 0.00 36.10 4.92
447 504 7.538678 CACAACTACTGTAAAATCAGAAATGGC 59.461 37.037 0.65 0.00 36.10 4.40
471 528 7.939039 TGGGATGATATTTCTTGATAAGGTCAC 59.061 37.037 0.00 0.00 36.32 3.67
472 529 8.044574 TGGGATGATATTTCTTGATAAGGTCA 57.955 34.615 0.00 0.00 34.25 4.02
473 530 8.787852 GTTGGGATGATATTTCTTGATAAGGTC 58.212 37.037 0.00 0.00 0.00 3.85
474 531 8.281531 TGTTGGGATGATATTTCTTGATAAGGT 58.718 33.333 0.00 0.00 0.00 3.50
475 532 8.696043 TGTTGGGATGATATTTCTTGATAAGG 57.304 34.615 0.00 0.00 0.00 2.69
477 534 7.041167 CGCTGTTGGGATGATATTTCTTGATAA 60.041 37.037 0.00 0.00 0.00 1.75
495 562 1.078426 CTAGTTCCCCCGCTGTTGG 60.078 63.158 0.00 0.00 0.00 3.77
502 569 0.393077 CACTATGCCTAGTTCCCCCG 59.607 60.000 0.00 0.00 35.99 5.73
503 570 0.108774 GCACTATGCCTAGTTCCCCC 59.891 60.000 0.00 0.00 35.99 5.40
504 571 3.708013 GCACTATGCCTAGTTCCCC 57.292 57.895 0.00 0.00 35.99 4.81
514 581 2.411904 GATCTAGCAGTGGCACTATGC 58.588 52.381 21.59 20.99 44.61 3.14
515 582 2.366590 TGGATCTAGCAGTGGCACTATG 59.633 50.000 21.59 11.33 44.61 2.23
516 583 2.682594 TGGATCTAGCAGTGGCACTAT 58.317 47.619 21.59 14.46 44.61 2.12
517 584 2.159179 TGGATCTAGCAGTGGCACTA 57.841 50.000 21.59 4.40 44.61 2.74
518 585 1.209019 CTTGGATCTAGCAGTGGCACT 59.791 52.381 15.88 15.88 44.61 4.40
519 586 1.661341 CTTGGATCTAGCAGTGGCAC 58.339 55.000 10.29 10.29 44.61 5.01
520 587 0.543277 CCTTGGATCTAGCAGTGGCA 59.457 55.000 0.00 0.00 44.61 4.92
521 588 0.543749 ACCTTGGATCTAGCAGTGGC 59.456 55.000 0.00 0.00 41.61 5.01
522 589 1.745141 GCACCTTGGATCTAGCAGTGG 60.745 57.143 0.00 0.00 0.00 4.00
523 590 1.661341 GCACCTTGGATCTAGCAGTG 58.339 55.000 0.00 0.00 0.00 3.66
524 591 0.176680 CGCACCTTGGATCTAGCAGT 59.823 55.000 0.00 0.00 0.00 4.40
525 592 0.461548 TCGCACCTTGGATCTAGCAG 59.538 55.000 0.00 0.00 0.00 4.24
526 593 0.901827 TTCGCACCTTGGATCTAGCA 59.098 50.000 0.00 0.00 0.00 3.49
527 594 1.666189 GTTTCGCACCTTGGATCTAGC 59.334 52.381 0.00 0.00 0.00 3.42
528 595 2.932614 CTGTTTCGCACCTTGGATCTAG 59.067 50.000 0.00 0.00 0.00 2.43
529 596 2.354704 CCTGTTTCGCACCTTGGATCTA 60.355 50.000 0.00 0.00 0.00 1.98
530 597 1.611673 CCTGTTTCGCACCTTGGATCT 60.612 52.381 0.00 0.00 0.00 2.75
531 598 0.804989 CCTGTTTCGCACCTTGGATC 59.195 55.000 0.00 0.00 0.00 3.36
532 599 0.110486 ACCTGTTTCGCACCTTGGAT 59.890 50.000 0.00 0.00 0.00 3.41
533 600 0.106918 AACCTGTTTCGCACCTTGGA 60.107 50.000 0.00 0.00 0.00 3.53
534 601 0.744281 AAACCTGTTTCGCACCTTGG 59.256 50.000 0.00 0.00 0.00 3.61
535 602 1.134175 ACAAACCTGTTTCGCACCTTG 59.866 47.619 0.00 0.00 28.57 3.61
536 603 1.134175 CACAAACCTGTTTCGCACCTT 59.866 47.619 0.00 0.00 31.64 3.50
537 604 0.738389 CACAAACCTGTTTCGCACCT 59.262 50.000 0.00 0.00 31.64 4.00
538 605 0.869880 GCACAAACCTGTTTCGCACC 60.870 55.000 8.19 0.00 31.64 5.01
539 606 0.100503 AGCACAAACCTGTTTCGCAC 59.899 50.000 13.27 0.00 31.64 5.34
540 607 1.669604 TAGCACAAACCTGTTTCGCA 58.330 45.000 13.27 1.57 31.64 5.10
541 608 2.989422 ATAGCACAAACCTGTTTCGC 57.011 45.000 5.84 5.84 31.64 4.70
545 612 4.460263 TGTCAGAATAGCACAAACCTGTT 58.540 39.130 0.00 0.00 31.64 3.16
547 614 4.940046 AGATGTCAGAATAGCACAAACCTG 59.060 41.667 0.00 0.00 0.00 4.00
552 619 5.059161 GGCATAGATGTCAGAATAGCACAA 58.941 41.667 0.00 0.00 31.41 3.33
558 625 4.492646 TGAGGGGCATAGATGTCAGAATA 58.507 43.478 0.00 0.00 33.08 1.75
567 634 4.608170 TTTTTCCTTGAGGGGCATAGAT 57.392 40.909 0.00 0.00 35.41 1.98
594 666 2.034878 GCCAGGAATTCCCCAATCTTC 58.965 52.381 21.22 0.00 36.42 2.87
596 668 0.106519 CGCCAGGAATTCCCCAATCT 60.107 55.000 21.22 0.00 36.42 2.40
599 671 0.610785 GAACGCCAGGAATTCCCCAA 60.611 55.000 21.22 0.00 36.42 4.12
650 722 1.048724 TGCCTAGGTCGGGGATTCTG 61.049 60.000 11.31 0.00 0.00 3.02
651 723 1.049289 GTGCCTAGGTCGGGGATTCT 61.049 60.000 11.31 0.00 0.00 2.40
655 727 1.229359 CTAGTGCCTAGGTCGGGGA 59.771 63.158 11.31 0.00 31.03 4.81
670 742 1.264557 CACGGTCGATCTAGTGGCTAG 59.735 57.143 0.00 0.00 35.57 3.42
671 743 1.134310 TCACGGTCGATCTAGTGGCTA 60.134 52.381 4.21 0.00 35.50 3.93
672 744 0.393944 TCACGGTCGATCTAGTGGCT 60.394 55.000 4.21 0.00 35.50 4.75
673 745 0.248539 GTCACGGTCGATCTAGTGGC 60.249 60.000 4.21 0.00 35.50 5.01
675 747 0.027716 CGGTCACGGTCGATCTAGTG 59.972 60.000 0.00 0.00 36.18 2.74
680 752 1.872679 GCTTCGGTCACGGTCGATC 60.873 63.158 0.00 0.00 41.39 3.69
709 784 0.890683 TTCCCTACGTCGAACCCTTC 59.109 55.000 0.00 0.00 0.00 3.46
710 785 0.893447 CTTCCCTACGTCGAACCCTT 59.107 55.000 0.00 0.00 0.00 3.95
712 787 1.514553 CCTTCCCTACGTCGAACCC 59.485 63.158 0.00 0.00 0.00 4.11
717 792 0.455005 GTTCTCCCTTCCCTACGTCG 59.545 60.000 0.00 0.00 0.00 5.12
722 797 0.708802 ACTCGGTTCTCCCTTCCCTA 59.291 55.000 0.00 0.00 0.00 3.53
735 810 0.038526 CGCCAAGTTAGTCACTCGGT 60.039 55.000 0.00 0.00 32.94 4.69
982 1073 2.364448 GGTTCGGCCTCCTCCTCT 60.364 66.667 0.00 0.00 0.00 3.69
1229 1355 2.203126 CCCTTCTCCATCGCCTGC 60.203 66.667 0.00 0.00 0.00 4.85
1348 1474 0.252467 ACAGGGAAGAGAGACAGGGG 60.252 60.000 0.00 0.00 0.00 4.79
1397 1523 3.706086 TGGCTGACAGCACATAGAAGATA 59.294 43.478 27.87 0.00 44.75 1.98
1398 1524 2.502947 TGGCTGACAGCACATAGAAGAT 59.497 45.455 27.87 0.00 44.75 2.40
1399 1525 1.901833 TGGCTGACAGCACATAGAAGA 59.098 47.619 27.87 0.00 44.75 2.87
1400 1526 2.391616 TGGCTGACAGCACATAGAAG 57.608 50.000 27.87 0.00 44.75 2.85
1401 1527 2.635714 CATGGCTGACAGCACATAGAA 58.364 47.619 27.87 5.46 44.75 2.10
1402 1528 1.134310 CCATGGCTGACAGCACATAGA 60.134 52.381 27.87 5.50 44.75 1.98
1403 1529 1.306148 CCATGGCTGACAGCACATAG 58.694 55.000 27.87 17.00 44.75 2.23
1417 1543 3.364267 CGATGAATGATACGCAACCATGG 60.364 47.826 11.19 11.19 0.00 3.66
1427 1553 6.736853 GCGCTTTATAAACCGATGAATGATAC 59.263 38.462 15.38 0.00 0.00 2.24
1438 1564 2.348218 CCTAAGCGCGCTTTATAAACCG 60.348 50.000 46.40 24.15 37.47 4.44
1489 1632 8.795786 TGAAAATATAGAACAGTTGCAACAAC 57.204 30.769 30.11 17.26 0.00 3.32
1492 1635 8.863049 CCAATGAAAATATAGAACAGTTGCAAC 58.137 33.333 22.17 22.17 0.00 4.17
1503 1646 8.672329 ACATCCCATCTCCAATGAAAATATAGA 58.328 33.333 0.00 0.00 0.00 1.98
1517 1660 4.898861 AGAGAGTAGAAACATCCCATCTCC 59.101 45.833 0.00 0.00 33.94 3.71
1537 1680 0.824109 TCCCATGTTCACCGCTAGAG 59.176 55.000 0.00 0.00 0.00 2.43
1562 1705 1.354031 TCCCAGGCTGAGCAATAACAA 59.646 47.619 17.94 0.00 0.00 2.83
1594 1738 3.963129 ACCACCTCAGAAAGTTCACAAA 58.037 40.909 0.00 0.00 0.00 2.83
1596 1740 4.764050 TTACCACCTCAGAAAGTTCACA 57.236 40.909 0.00 0.00 0.00 3.58
1638 1782 0.331278 TACATTGCACCTTCCCTGGG 59.669 55.000 6.33 6.33 0.00 4.45
1656 1800 8.298854 CAACCAAACTGAATCTTCAATCACATA 58.701 33.333 0.00 0.00 36.64 2.29
1697 1841 7.254795 CGAAACTTATTAAGCATTCCACCTAGG 60.255 40.741 7.41 7.41 39.47 3.02
1723 1867 3.111098 CTCTTGTTGTTTGCTGCAAGAC 58.889 45.455 15.39 15.66 41.33 3.01
1819 1967 8.585471 ATGAAGGTCAACATCTGTGAATTAAT 57.415 30.769 0.00 0.00 0.00 1.40
1828 1976 3.688185 CACTGGATGAAGGTCAACATCTG 59.312 47.826 0.00 0.00 41.50 2.90
1995 2149 1.499056 GACGCCAATGCACAGACTG 59.501 57.895 0.00 0.00 37.32 3.51
1999 2153 2.743752 CGAGGACGCCAATGCACAG 61.744 63.158 0.00 0.00 37.32 3.66
2082 2236 9.886337 TGACCATAGATGTAAATAGGTACCTTA 57.114 33.333 22.11 3.35 0.00 2.69
2110 2264 7.173562 AGTGTATACGTCATTAAGGCAAAAACA 59.826 33.333 0.00 0.00 0.00 2.83
2215 2369 2.027837 AGCACATTTTTCCCAATGGCTC 60.028 45.455 0.00 0.00 36.64 4.70
2226 2380 5.257082 ACCTAAACGAACAGCACATTTTT 57.743 34.783 0.00 0.00 0.00 1.94
2286 2441 9.967451 TTTAAGAATACATACATTGTTCCTCCA 57.033 29.630 0.00 0.00 39.87 3.86
2344 2499 4.578516 CACAAGGTTCTTGTGGTTGACATA 59.421 41.667 24.88 0.00 44.33 2.29
2723 2878 9.029368 ACTATGTAGCAGAAGATATCAGCATTA 57.971 33.333 5.32 0.00 42.63 1.90
2729 2884 8.926092 ACTGTACTATGTAGCAGAAGATATCA 57.074 34.615 5.32 0.00 33.57 2.15
2733 2888 7.287061 AGAGACTGTACTATGTAGCAGAAGAT 58.713 38.462 0.00 0.00 33.57 2.40
2829 2984 1.202065 CGATTCCACATCACGCAAAGG 60.202 52.381 0.00 0.00 0.00 3.11
2898 3053 7.389330 TCTTGTTGTGTTCACTTCTAAAGTTCA 59.611 33.333 4.59 0.00 40.46 3.18
2911 3066 6.073276 CCAATACTCGAATCTTGTTGTGTTCA 60.073 38.462 0.00 0.00 0.00 3.18
2916 3071 4.323417 TGCCAATACTCGAATCTTGTTGT 58.677 39.130 0.00 0.00 0.00 3.32
2919 3074 4.759693 TGTTTGCCAATACTCGAATCTTGT 59.240 37.500 0.00 0.00 0.00 3.16
2938 3093 7.123547 TGTCAAACAATCTTTCCCTAACTGTTT 59.876 33.333 0.00 0.00 36.29 2.83
3223 3395 5.308825 AGAGAAACCAGAACATCGTCATTT 58.691 37.500 0.00 0.00 0.00 2.32
3473 3645 0.883833 ATTTCTGAAACGGCAGCAGG 59.116 50.000 4.73 0.00 35.86 4.85
3544 3716 6.543831 ACCCTAAGCTTGTAGATGCATTTAAG 59.456 38.462 9.86 4.87 0.00 1.85
3636 3815 3.134127 GGCGATCACAGGCAACCC 61.134 66.667 0.00 0.00 37.17 4.11
3650 3829 7.436080 ACAAAGAATAGATGCAAAAATATGGCG 59.564 33.333 0.00 0.00 0.00 5.69
3689 3868 1.946984 ATTGTGGAACGGAGGGAGTA 58.053 50.000 0.00 0.00 42.39 2.59
3690 3869 1.946984 TATTGTGGAACGGAGGGAGT 58.053 50.000 0.00 0.00 42.39 3.85
3691 3870 3.641906 ACTATATTGTGGAACGGAGGGAG 59.358 47.826 0.00 0.00 42.39 4.30
3692 3871 3.386726 CACTATATTGTGGAACGGAGGGA 59.613 47.826 9.17 0.00 42.39 4.20
3693 3872 3.728845 CACTATATTGTGGAACGGAGGG 58.271 50.000 9.17 0.00 42.39 4.30
3694 3873 3.131396 GCACTATATTGTGGAACGGAGG 58.869 50.000 17.22 0.00 42.39 4.30
3695 3874 2.794910 CGCACTATATTGTGGAACGGAG 59.205 50.000 17.22 0.00 42.39 4.63
3696 3875 2.816689 CGCACTATATTGTGGAACGGA 58.183 47.619 17.22 0.00 42.39 4.69
3697 3876 1.260561 GCGCACTATATTGTGGAACGG 59.739 52.381 17.22 1.93 42.39 4.44
3698 3877 1.260561 GGCGCACTATATTGTGGAACG 59.739 52.381 17.22 13.27 42.39 3.95
3699 3878 1.602377 GGGCGCACTATATTGTGGAAC 59.398 52.381 17.22 2.24 38.31 3.62
3700 3879 1.808512 CGGGCGCACTATATTGTGGAA 60.809 52.381 17.22 0.00 38.31 3.53
3701 3880 0.249699 CGGGCGCACTATATTGTGGA 60.250 55.000 17.22 0.00 38.31 4.02
3702 3881 0.531974 ACGGGCGCACTATATTGTGG 60.532 55.000 17.22 9.54 38.31 4.17
3703 3882 0.581529 CACGGGCGCACTATATTGTG 59.418 55.000 8.62 12.29 40.62 3.33
3704 3883 1.157870 GCACGGGCGCACTATATTGT 61.158 55.000 8.62 0.00 0.00 2.71
3705 3884 1.569493 GCACGGGCGCACTATATTG 59.431 57.895 8.62 0.00 0.00 1.90
3706 3885 4.043168 GCACGGGCGCACTATATT 57.957 55.556 8.62 0.00 0.00 1.28
3716 3895 1.578206 GAACCTCAGAAAGCACGGGC 61.578 60.000 0.00 0.00 41.61 6.13
3717 3896 0.250295 TGAACCTCAGAAAGCACGGG 60.250 55.000 0.00 0.00 0.00 5.28
3718 3897 1.264288 GTTGAACCTCAGAAAGCACGG 59.736 52.381 0.00 0.00 0.00 4.94
3719 3898 2.213499 AGTTGAACCTCAGAAAGCACG 58.787 47.619 0.00 0.00 0.00 5.34
3720 3899 4.096382 TCAAAGTTGAACCTCAGAAAGCAC 59.904 41.667 0.00 0.00 33.55 4.40
3721 3900 4.096382 GTCAAAGTTGAACCTCAGAAAGCA 59.904 41.667 0.00 0.00 39.21 3.91
3722 3901 4.498177 GGTCAAAGTTGAACCTCAGAAAGC 60.498 45.833 0.00 0.00 38.96 3.51
3723 3902 4.640201 TGGTCAAAGTTGAACCTCAGAAAG 59.360 41.667 6.62 0.00 44.20 2.62
3724 3903 4.594970 TGGTCAAAGTTGAACCTCAGAAA 58.405 39.130 6.62 0.00 44.20 2.52
3725 3904 4.229304 TGGTCAAAGTTGAACCTCAGAA 57.771 40.909 6.62 0.00 44.20 3.02
3726 3905 3.924114 TGGTCAAAGTTGAACCTCAGA 57.076 42.857 6.62 0.00 44.20 3.27
3727 3906 6.633500 TTTATGGTCAAAGTTGAACCTCAG 57.367 37.500 6.62 0.00 44.20 3.35
3728 3907 7.595819 AATTTATGGTCAAAGTTGAACCTCA 57.404 32.000 6.62 0.00 44.20 3.86
3729 3908 9.974980 TTAAATTTATGGTCAAAGTTGAACCTC 57.025 29.630 6.62 0.00 44.20 3.85
3730 3909 9.758651 GTTAAATTTATGGTCAAAGTTGAACCT 57.241 29.630 6.62 0.00 44.20 3.50
3731 3910 8.984764 GGTTAAATTTATGGTCAAAGTTGAACC 58.015 33.333 6.62 6.25 44.20 3.62
3732 3911 9.535878 TGGTTAAATTTATGGTCAAAGTTGAAC 57.464 29.630 1.98 1.98 45.04 3.18
3734 3913 9.535878 GTTGGTTAAATTTATGGTCAAAGTTGA 57.464 29.630 0.00 0.00 34.20 3.18
3735 3914 8.484008 CGTTGGTTAAATTTATGGTCAAAGTTG 58.516 33.333 0.00 0.00 29.44 3.16
3736 3915 8.414778 TCGTTGGTTAAATTTATGGTCAAAGTT 58.585 29.630 0.00 0.00 31.36 2.66
3737 3916 7.942990 TCGTTGGTTAAATTTATGGTCAAAGT 58.057 30.769 0.00 0.00 0.00 2.66
3738 3917 8.293867 TCTCGTTGGTTAAATTTATGGTCAAAG 58.706 33.333 0.00 4.88 0.00 2.77
3739 3918 8.077386 GTCTCGTTGGTTAAATTTATGGTCAAA 58.923 33.333 0.00 0.00 0.00 2.69
3740 3919 7.308710 GGTCTCGTTGGTTAAATTTATGGTCAA 60.309 37.037 0.00 0.00 0.00 3.18
3741 3920 6.149807 GGTCTCGTTGGTTAAATTTATGGTCA 59.850 38.462 0.00 0.00 0.00 4.02
3742 3921 6.549061 GGTCTCGTTGGTTAAATTTATGGTC 58.451 40.000 0.00 0.00 0.00 4.02
3743 3922 5.122711 CGGTCTCGTTGGTTAAATTTATGGT 59.877 40.000 0.00 0.00 0.00 3.55
3744 3923 5.352016 TCGGTCTCGTTGGTTAAATTTATGG 59.648 40.000 0.00 0.00 37.69 2.74
3745 3924 6.091713 AGTCGGTCTCGTTGGTTAAATTTATG 59.908 38.462 0.00 0.00 37.69 1.90
3746 3925 6.091713 CAGTCGGTCTCGTTGGTTAAATTTAT 59.908 38.462 0.00 0.00 37.69 1.40
3747 3926 5.406175 CAGTCGGTCTCGTTGGTTAAATTTA 59.594 40.000 0.00 0.00 37.69 1.40
3748 3927 4.212636 CAGTCGGTCTCGTTGGTTAAATTT 59.787 41.667 0.00 0.00 37.69 1.82
3749 3928 3.744426 CAGTCGGTCTCGTTGGTTAAATT 59.256 43.478 0.00 0.00 37.69 1.82
3750 3929 3.323243 CAGTCGGTCTCGTTGGTTAAAT 58.677 45.455 0.00 0.00 37.69 1.40
3751 3930 2.746269 CAGTCGGTCTCGTTGGTTAAA 58.254 47.619 0.00 0.00 37.69 1.52
3752 3931 1.603678 GCAGTCGGTCTCGTTGGTTAA 60.604 52.381 0.00 0.00 37.69 2.01
3753 3932 0.038892 GCAGTCGGTCTCGTTGGTTA 60.039 55.000 0.00 0.00 37.69 2.85
3754 3933 1.300697 GCAGTCGGTCTCGTTGGTT 60.301 57.895 0.00 0.00 37.69 3.67
3755 3934 2.338984 GCAGTCGGTCTCGTTGGT 59.661 61.111 0.00 0.00 37.69 3.67
3756 3935 2.805353 CGCAGTCGGTCTCGTTGG 60.805 66.667 0.00 0.00 37.69 3.77
3768 3947 4.947147 TTTTGCTCCCGCCGCAGT 62.947 61.111 0.00 0.00 38.80 4.40
3769 3948 2.490993 AATTTTTGCTCCCGCCGCAG 62.491 55.000 0.00 0.00 38.80 5.18
3770 3949 1.244697 TAATTTTTGCTCCCGCCGCA 61.245 50.000 0.00 0.00 35.22 5.69
3771 3950 0.102300 ATAATTTTTGCTCCCGCCGC 59.898 50.000 0.00 0.00 34.43 6.53
3772 3951 3.915437 ATATAATTTTTGCTCCCGCCG 57.085 42.857 0.00 0.00 34.43 6.46
3773 3952 7.375053 TCAATTATATAATTTTTGCTCCCGCC 58.625 34.615 16.47 0.00 33.88 6.13
3774 3953 8.810652 TTCAATTATATAATTTTTGCTCCCGC 57.189 30.769 16.47 0.00 33.88 6.13
3809 3988 9.661563 AAAGTTATACCAGTGAATTCGTATTCA 57.338 29.630 12.80 12.80 45.99 2.57
3812 3991 8.395633 GCAAAAGTTATACCAGTGAATTCGTAT 58.604 33.333 0.04 5.16 0.00 3.06
3813 3992 7.604927 AGCAAAAGTTATACCAGTGAATTCGTA 59.395 33.333 0.04 0.00 0.00 3.43
3814 3993 6.430000 AGCAAAAGTTATACCAGTGAATTCGT 59.570 34.615 0.04 0.00 0.00 3.85
3815 3994 6.842163 AGCAAAAGTTATACCAGTGAATTCG 58.158 36.000 0.04 0.00 0.00 3.34
3816 3995 7.251281 GGAGCAAAAGTTATACCAGTGAATTC 58.749 38.462 0.00 0.00 0.00 2.17
3817 3996 6.152831 GGGAGCAAAAGTTATACCAGTGAATT 59.847 38.462 0.00 0.00 0.00 2.17
3818 3997 5.652452 GGGAGCAAAAGTTATACCAGTGAAT 59.348 40.000 0.00 0.00 0.00 2.57
3819 3998 5.007682 GGGAGCAAAAGTTATACCAGTGAA 58.992 41.667 0.00 0.00 0.00 3.18
3820 3999 4.585879 GGGAGCAAAAGTTATACCAGTGA 58.414 43.478 0.00 0.00 0.00 3.41
3821 4000 3.374058 CGGGAGCAAAAGTTATACCAGTG 59.626 47.826 0.00 0.00 0.00 3.66
3822 4001 3.606687 CGGGAGCAAAAGTTATACCAGT 58.393 45.455 0.00 0.00 0.00 4.00
3838 4017 0.605319 TTAACCAACAGCAGCGGGAG 60.605 55.000 0.00 0.00 0.00 4.30
3839 4018 0.179015 TTTAACCAACAGCAGCGGGA 60.179 50.000 0.00 0.00 0.00 5.14
3840 4019 0.887933 ATTTAACCAACAGCAGCGGG 59.112 50.000 0.00 0.00 0.00 6.13
3841 4020 2.723124 AATTTAACCAACAGCAGCGG 57.277 45.000 0.00 0.00 0.00 5.52
3842 4021 4.562394 CCATAAATTTAACCAACAGCAGCG 59.438 41.667 1.21 0.00 0.00 5.18
3843 4022 5.478407 ACCATAAATTTAACCAACAGCAGC 58.522 37.500 1.21 0.00 0.00 5.25
3844 4023 6.686630 TGACCATAAATTTAACCAACAGCAG 58.313 36.000 1.21 0.00 0.00 4.24
3845 4024 6.656632 TGACCATAAATTTAACCAACAGCA 57.343 33.333 1.21 0.00 0.00 4.41
3846 4025 7.655732 ACTTTGACCATAAATTTAACCAACAGC 59.344 33.333 1.21 0.00 0.00 4.40
3847 4026 9.541143 AACTTTGACCATAAATTTAACCAACAG 57.459 29.630 1.21 7.15 0.00 3.16
3848 4027 9.319143 CAACTTTGACCATAAATTTAACCAACA 57.681 29.630 1.21 0.00 0.00 3.33
3849 4028 9.535878 TCAACTTTGACCATAAATTTAACCAAC 57.464 29.630 1.21 0.00 31.01 3.77
3851 4030 9.757227 CTTCAACTTTGACCATAAATTTAACCA 57.243 29.630 1.21 0.00 36.83 3.67
3852 4031 8.708742 GCTTCAACTTTGACCATAAATTTAACC 58.291 33.333 1.21 0.00 36.83 2.85
3853 4032 9.255304 TGCTTCAACTTTGACCATAAATTTAAC 57.745 29.630 1.21 0.00 36.83 2.01
3854 4033 9.255304 GTGCTTCAACTTTGACCATAAATTTAA 57.745 29.630 1.21 0.00 36.83 1.52
3855 4034 7.593273 CGTGCTTCAACTTTGACCATAAATTTA 59.407 33.333 0.00 0.00 36.83 1.40
3856 4035 6.420604 CGTGCTTCAACTTTGACCATAAATTT 59.579 34.615 0.00 0.00 36.83 1.82
3857 4036 5.920273 CGTGCTTCAACTTTGACCATAAATT 59.080 36.000 0.00 0.00 36.83 1.82
3858 4037 5.460646 CGTGCTTCAACTTTGACCATAAAT 58.539 37.500 0.00 0.00 36.83 1.40
3859 4038 4.261405 CCGTGCTTCAACTTTGACCATAAA 60.261 41.667 0.00 0.00 36.83 1.40
3860 4039 3.252215 CCGTGCTTCAACTTTGACCATAA 59.748 43.478 0.00 0.00 36.83 1.90
3861 4040 2.811431 CCGTGCTTCAACTTTGACCATA 59.189 45.455 0.00 0.00 36.83 2.74
3862 4041 1.608590 CCGTGCTTCAACTTTGACCAT 59.391 47.619 0.00 0.00 36.83 3.55
3863 4042 1.021202 CCGTGCTTCAACTTTGACCA 58.979 50.000 0.00 0.00 36.83 4.02
3864 4043 0.310854 CCCGTGCTTCAACTTTGACC 59.689 55.000 0.00 0.00 36.83 4.02
3865 4044 1.305201 TCCCGTGCTTCAACTTTGAC 58.695 50.000 0.00 0.00 36.83 3.18
3866 4045 1.673920 GTTCCCGTGCTTCAACTTTGA 59.326 47.619 0.00 0.00 34.92 2.69
3867 4046 1.269051 GGTTCCCGTGCTTCAACTTTG 60.269 52.381 0.00 0.00 0.00 2.77
3868 4047 1.029681 GGTTCCCGTGCTTCAACTTT 58.970 50.000 0.00 0.00 0.00 2.66
3869 4048 1.164041 CGGTTCCCGTGCTTCAACTT 61.164 55.000 0.00 0.00 42.73 2.66
3870 4049 1.597027 CGGTTCCCGTGCTTCAACT 60.597 57.895 0.00 0.00 42.73 3.16
3871 4050 2.943653 CGGTTCCCGTGCTTCAAC 59.056 61.111 0.00 0.00 42.73 3.18
3881 4060 1.673808 ATAGTGCGTCCTCGGTTCCC 61.674 60.000 0.00 0.00 37.56 3.97
3882 4061 1.027357 TATAGTGCGTCCTCGGTTCC 58.973 55.000 0.00 0.00 37.56 3.62
3883 4062 3.366440 AATATAGTGCGTCCTCGGTTC 57.634 47.619 0.00 0.00 37.56 3.62
3884 4063 3.814005 AAATATAGTGCGTCCTCGGTT 57.186 42.857 0.00 0.00 37.56 4.44
3885 4064 3.454375 CAAAATATAGTGCGTCCTCGGT 58.546 45.455 0.00 0.00 37.56 4.69
3886 4065 2.800544 CCAAAATATAGTGCGTCCTCGG 59.199 50.000 0.00 0.00 37.56 4.63
3887 4066 3.713288 TCCAAAATATAGTGCGTCCTCG 58.287 45.455 0.00 0.00 40.37 4.63
3888 4067 4.025979 CGTTCCAAAATATAGTGCGTCCTC 60.026 45.833 0.00 0.00 0.00 3.71
3889 4068 3.869246 CGTTCCAAAATATAGTGCGTCCT 59.131 43.478 0.00 0.00 0.00 3.85
3890 4069 3.001939 CCGTTCCAAAATATAGTGCGTCC 59.998 47.826 0.00 0.00 0.00 4.79
3891 4070 3.866910 TCCGTTCCAAAATATAGTGCGTC 59.133 43.478 0.00 0.00 0.00 5.19
3892 4071 3.864243 TCCGTTCCAAAATATAGTGCGT 58.136 40.909 0.00 0.00 0.00 5.24
3893 4072 3.247648 CCTCCGTTCCAAAATATAGTGCG 59.752 47.826 0.00 0.00 0.00 5.34
3894 4073 3.564225 CCCTCCGTTCCAAAATATAGTGC 59.436 47.826 0.00 0.00 0.00 4.40
3895 4074 5.031066 TCCCTCCGTTCCAAAATATAGTG 57.969 43.478 0.00 0.00 0.00 2.74
3896 4075 5.906772 ATCCCTCCGTTCCAAAATATAGT 57.093 39.130 0.00 0.00 0.00 2.12
3897 4076 7.883311 ACATAATCCCTCCGTTCCAAAATATAG 59.117 37.037 0.00 0.00 0.00 1.31
3898 4077 7.663905 CACATAATCCCTCCGTTCCAAAATATA 59.336 37.037 0.00 0.00 0.00 0.86
3899 4078 6.490040 CACATAATCCCTCCGTTCCAAAATAT 59.510 38.462 0.00 0.00 0.00 1.28
3900 4079 5.825679 CACATAATCCCTCCGTTCCAAAATA 59.174 40.000 0.00 0.00 0.00 1.40
3901 4080 4.644685 CACATAATCCCTCCGTTCCAAAAT 59.355 41.667 0.00 0.00 0.00 1.82
3902 4081 4.013728 CACATAATCCCTCCGTTCCAAAA 58.986 43.478 0.00 0.00 0.00 2.44
3903 4082 3.616219 CACATAATCCCTCCGTTCCAAA 58.384 45.455 0.00 0.00 0.00 3.28
3904 4083 2.092646 CCACATAATCCCTCCGTTCCAA 60.093 50.000 0.00 0.00 0.00 3.53
3905 4084 1.488812 CCACATAATCCCTCCGTTCCA 59.511 52.381 0.00 0.00 0.00 3.53
3906 4085 1.202770 CCCACATAATCCCTCCGTTCC 60.203 57.143 0.00 0.00 0.00 3.62
3907 4086 1.489230 ACCCACATAATCCCTCCGTTC 59.511 52.381 0.00 0.00 0.00 3.95
3908 4087 1.211949 CACCCACATAATCCCTCCGTT 59.788 52.381 0.00 0.00 0.00 4.44
3909 4088 0.837272 CACCCACATAATCCCTCCGT 59.163 55.000 0.00 0.00 0.00 4.69
3910 4089 0.535102 GCACCCACATAATCCCTCCG 60.535 60.000 0.00 0.00 0.00 4.63
3911 4090 0.550914 TGCACCCACATAATCCCTCC 59.449 55.000 0.00 0.00 0.00 4.30
3912 4091 1.212935 ACTGCACCCACATAATCCCTC 59.787 52.381 0.00 0.00 0.00 4.30
3913 4092 1.064463 CACTGCACCCACATAATCCCT 60.064 52.381 0.00 0.00 0.00 4.20
3914 4093 1.392589 CACTGCACCCACATAATCCC 58.607 55.000 0.00 0.00 0.00 3.85
3915 4094 0.740737 GCACTGCACCCACATAATCC 59.259 55.000 0.00 0.00 0.00 3.01
3916 4095 1.462616 TGCACTGCACCCACATAATC 58.537 50.000 0.00 0.00 31.71 1.75
3917 4096 3.668147 TGCACTGCACCCACATAAT 57.332 47.368 0.00 0.00 31.71 1.28
4045 4224 9.810545 AAGCTAATTTTAAGTTACAAACTGCAA 57.189 25.926 0.00 0.00 41.91 4.08
4094 4273 8.782339 ATTGAATCATTTTTCCCTTTTGCTAG 57.218 30.769 0.00 0.00 0.00 3.42
4118 4297 5.528690 GGTGCATGACAATGTACTCACATAT 59.471 40.000 0.00 0.00 44.83 1.78
4121 4300 3.073678 GGTGCATGACAATGTACTCACA 58.926 45.455 0.00 0.00 45.65 3.58
4122 4301 3.338249 AGGTGCATGACAATGTACTCAC 58.662 45.455 0.00 0.00 45.65 3.51
4124 4303 3.753272 ACAAGGTGCATGACAATGTACTC 59.247 43.478 0.00 0.00 45.65 2.59
4125 4304 3.503363 CACAAGGTGCATGACAATGTACT 59.497 43.478 0.00 0.00 45.65 2.73
4143 4345 7.384439 TCAAATGTTTACAGAGAACACACAA 57.616 32.000 0.00 0.00 39.57 3.33
4169 4371 8.821147 TTCAATTCCAAACTTCATTTCATCAG 57.179 30.769 0.00 0.00 0.00 2.90
4241 4456 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
4242 4457 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
4243 4458 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
4244 4459 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
4245 4460 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
4246 4461 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
4247 4462 6.683974 ATTGAGTCATCTATTTTGGAACGG 57.316 37.500 0.00 0.00 0.00 4.44
4248 4463 9.708222 CTTTATTGAGTCATCTATTTTGGAACG 57.292 33.333 0.00 0.00 0.00 3.95
4277 4492 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
4278 4493 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
4279 4494 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
4280 4495 8.463930 TTCCAAAATAGATGACTCAACTTTGT 57.536 30.769 0.00 0.00 0.00 2.83
4295 4510 8.487028 ACAACTACTCCCTCTATTCCAAAATAG 58.513 37.037 0.00 0.00 43.88 1.73
4296 4511 8.388656 ACAACTACTCCCTCTATTCCAAAATA 57.611 34.615 0.00 0.00 0.00 1.40
4297 4512 7.272144 ACAACTACTCCCTCTATTCCAAAAT 57.728 36.000 0.00 0.00 0.00 1.82
4298 4513 6.697641 ACAACTACTCCCTCTATTCCAAAA 57.302 37.500 0.00 0.00 0.00 2.44
4299 4514 6.697641 AACAACTACTCCCTCTATTCCAAA 57.302 37.500 0.00 0.00 0.00 3.28
4300 4515 7.989947 ATAACAACTACTCCCTCTATTCCAA 57.010 36.000 0.00 0.00 0.00 3.53
4301 4516 7.989947 AATAACAACTACTCCCTCTATTCCA 57.010 36.000 0.00 0.00 0.00 3.53
4302 4517 7.226918 GCAAATAACAACTACTCCCTCTATTCC 59.773 40.741 0.00 0.00 0.00 3.01
4303 4518 7.988028 AGCAAATAACAACTACTCCCTCTATTC 59.012 37.037 0.00 0.00 0.00 1.75
4304 4519 7.862675 AGCAAATAACAACTACTCCCTCTATT 58.137 34.615 0.00 0.00 0.00 1.73
4305 4520 7.345914 AGAGCAAATAACAACTACTCCCTCTAT 59.654 37.037 0.00 0.00 0.00 1.98
4306 4521 6.668283 AGAGCAAATAACAACTACTCCCTCTA 59.332 38.462 0.00 0.00 0.00 2.43
4307 4522 5.485708 AGAGCAAATAACAACTACTCCCTCT 59.514 40.000 0.00 0.00 0.00 3.69
4308 4523 5.735766 AGAGCAAATAACAACTACTCCCTC 58.264 41.667 0.00 0.00 0.00 4.30
4309 4524 5.485708 AGAGAGCAAATAACAACTACTCCCT 59.514 40.000 0.00 0.00 0.00 4.20
4310 4525 5.735766 AGAGAGCAAATAACAACTACTCCC 58.264 41.667 0.00 0.00 0.00 4.30
4311 4526 6.635755 AGAGAGAGCAAATAACAACTACTCC 58.364 40.000 0.00 0.00 0.00 3.85
4312 4527 6.754675 GGAGAGAGAGCAAATAACAACTACTC 59.245 42.308 0.00 0.00 0.00 2.59
4313 4528 6.351456 GGGAGAGAGAGCAAATAACAACTACT 60.351 42.308 0.00 0.00 0.00 2.57
4314 4529 5.813157 GGGAGAGAGAGCAAATAACAACTAC 59.187 44.000 0.00 0.00 0.00 2.73
4315 4530 5.721960 AGGGAGAGAGAGCAAATAACAACTA 59.278 40.000 0.00 0.00 0.00 2.24
4316 4531 4.534103 AGGGAGAGAGAGCAAATAACAACT 59.466 41.667 0.00 0.00 0.00 3.16
4386 4637 7.480760 TTTAAGCCTTTTTCATATCCTGCTT 57.519 32.000 0.00 0.00 40.55 3.91
4432 4683 1.806542 GGCAGTGAATTCGCTTCTTGA 59.193 47.619 18.80 0.00 33.88 3.02
4518 4769 1.808945 CTGCCGAAATCAACTGCTTCT 59.191 47.619 0.00 0.00 0.00 2.85
4527 4778 3.430862 GCGCCACTGCCGAAATCA 61.431 61.111 0.00 0.00 0.00 2.57
4545 4796 5.163713 CCAAACTAGCCATCTTAAAGACTGC 60.164 44.000 0.00 0.00 0.00 4.40
4593 4844 7.118535 TGTGAAATGCAAAAATCATCATTCAGG 59.881 33.333 0.00 0.00 27.64 3.86
4654 4905 7.845037 TCATCTATCTTGGGCTATAAGACATG 58.155 38.462 0.00 0.00 37.03 3.21
4655 4906 8.621126 ATCATCTATCTTGGGCTATAAGACAT 57.379 34.615 0.00 0.00 37.03 3.06
4767 5021 0.178967 TTGCCAATGCTTCACCTGGA 60.179 50.000 0.00 0.00 38.71 3.86
4771 5025 1.444895 CGCTTGCCAATGCTTCACC 60.445 57.895 0.00 0.00 38.71 4.02
4789 5043 1.831580 ACGGAGTGGTCTAGTGGTAC 58.168 55.000 0.00 0.00 42.51 3.34
4803 5057 3.512680 GTCAATGTCTTCTACCACGGAG 58.487 50.000 0.00 0.00 0.00 4.63
4824 5078 1.811645 AAACCGCCCATGTTTTCGGG 61.812 55.000 13.93 0.00 45.58 5.14
4863 5117 3.677284 ATGAGGTGGAGCAGCTGCG 62.677 63.158 31.78 0.00 42.53 5.18
4866 5120 1.203441 TTGGATGAGGTGGAGCAGCT 61.203 55.000 0.00 0.00 45.28 4.24
4929 5183 1.414181 CTTGCGTCCCTCTCCACATAT 59.586 52.381 0.00 0.00 0.00 1.78
5144 5398 3.088532 TGATCCATTGTTACAACCCAGC 58.911 45.455 0.00 0.00 0.00 4.85
5146 5400 5.568423 GCAATTGATCCATTGTTACAACCCA 60.568 40.000 17.99 0.00 0.00 4.51
5147 5401 4.869861 GCAATTGATCCATTGTTACAACCC 59.130 41.667 17.99 0.00 0.00 4.11
5150 5404 6.154877 AGGATGCAATTGATCCATTGTTACAA 59.845 34.615 25.70 0.00 41.82 2.41
5159 5449 4.351704 TCCTGATAGGATGCAATTGATCCA 59.648 41.667 25.70 17.30 40.06 3.41
5160 5450 4.914983 TCCTGATAGGATGCAATTGATCC 58.085 43.478 20.55 20.55 40.06 3.36
5163 5453 3.136992 TGCTCCTGATAGGATGCAATTGA 59.863 43.478 10.34 0.00 44.81 2.57
5166 5456 3.561528 CCATGCTCCTGATAGGATGCAAT 60.562 47.826 18.79 9.92 44.81 3.56
5174 5464 0.602106 CGCCACCATGCTCCTGATAG 60.602 60.000 0.00 0.00 0.00 2.08
5186 5476 2.038814 ATACATCGATGCCGCCACCA 62.039 55.000 25.11 1.18 35.37 4.17
5242 5532 5.791974 CAGAATAAAACATCACGAGCACAAG 59.208 40.000 0.00 0.00 0.00 3.16
5250 5540 9.636965 CATATGTACACAGAATAAAACATCACG 57.363 33.333 0.00 0.00 0.00 4.35
5252 5542 9.394767 AGCATATGTACACAGAATAAAACATCA 57.605 29.630 0.00 0.00 0.00 3.07
5280 5603 4.211164 TGATTGCTCTACCAAAATATCGCG 59.789 41.667 0.00 0.00 0.00 5.87
5281 5604 5.466728 TCTGATTGCTCTACCAAAATATCGC 59.533 40.000 0.00 0.00 0.00 4.58
5282 5605 6.925718 TCTCTGATTGCTCTACCAAAATATCG 59.074 38.462 0.00 0.00 0.00 2.92
5284 5607 8.435187 TCATCTCTGATTGCTCTACCAAAATAT 58.565 33.333 0.00 0.00 0.00 1.28
5285 5608 7.795047 TCATCTCTGATTGCTCTACCAAAATA 58.205 34.615 0.00 0.00 0.00 1.40
5312 5638 9.715121 ATCTTCTGTAATGTTTGCATTTCATTT 57.285 25.926 13.75 0.00 42.19 2.32
5318 5644 9.507280 CGAATAATCTTCTGTAATGTTTGCATT 57.493 29.630 0.00 0.00 46.14 3.56
5430 5819 5.127682 AGGAACTGCAACTTTTTCAGATGTT 59.872 36.000 0.00 0.00 37.18 2.71
5450 5841 7.936847 TGTGTAGATGCTTCTTTCTTTTAGGAA 59.063 33.333 7.51 0.00 33.17 3.36
5502 5904 2.974148 CAACTGCTGTGCCGCTCA 60.974 61.111 0.00 0.00 0.00 4.26
5537 5940 3.071206 GCAGTCGGAGCTGGAGGA 61.071 66.667 0.00 0.00 37.00 3.71
5560 5963 4.321966 TGTGGGGATGCGTTCGCA 62.322 61.111 21.44 21.44 45.65 5.10
5579 5983 4.320456 ACTCCTGTGCCACTGCCG 62.320 66.667 0.00 0.00 36.33 5.69
5580 5984 1.544825 TAGACTCCTGTGCCACTGCC 61.545 60.000 0.00 0.00 36.33 4.85
5581 5985 0.390472 GTAGACTCCTGTGCCACTGC 60.390 60.000 0.00 0.00 38.26 4.40
5582 5986 0.247736 GGTAGACTCCTGTGCCACTG 59.752 60.000 0.00 0.00 0.00 3.66
5583 5987 1.251527 CGGTAGACTCCTGTGCCACT 61.252 60.000 0.00 0.00 0.00 4.00
5584 5988 1.215647 CGGTAGACTCCTGTGCCAC 59.784 63.158 0.00 0.00 0.00 5.01
5585 5989 1.982395 CCGGTAGACTCCTGTGCCA 60.982 63.158 0.00 0.00 0.00 4.92
5586 5990 2.893398 CCGGTAGACTCCTGTGCC 59.107 66.667 0.00 0.00 0.00 5.01
5587 5991 2.184579 GCCGGTAGACTCCTGTGC 59.815 66.667 1.90 0.00 0.00 4.57
5588 5992 2.893398 GGCCGGTAGACTCCTGTG 59.107 66.667 1.90 0.00 0.00 3.66
5589 5993 2.754658 CGGCCGGTAGACTCCTGT 60.755 66.667 20.10 0.00 0.00 4.00
5590 5994 3.528370 CCGGCCGGTAGACTCCTG 61.528 72.222 36.64 6.12 0.00 3.86
5608 6012 4.609018 CACTGATAGGCCGGCCGG 62.609 72.222 40.26 40.26 41.95 6.13
5878 6318 2.444140 ATCGTAGCCCGCTCCCTT 60.444 61.111 0.00 0.00 36.19 3.95
5890 6330 0.745486 TCCGCGACTCCAAGATCGTA 60.745 55.000 8.23 0.00 40.49 3.43
6036 6479 2.126502 CAAATCCCACAACCGCGC 60.127 61.111 0.00 0.00 0.00 6.86
6037 6480 2.566010 CCAAATCCCACAACCGCG 59.434 61.111 0.00 0.00 0.00 6.46
6039 6482 2.969827 GCCCAAATCCCACAACCG 59.030 61.111 0.00 0.00 0.00 4.44
6040 6483 2.969827 CGCCCAAATCCCACAACC 59.030 61.111 0.00 0.00 0.00 3.77
6042 6485 3.369400 CGCGCCCAAATCCCACAA 61.369 61.111 0.00 0.00 0.00 3.33
6049 6492 1.301322 CAAAAACCCGCGCCCAAAT 60.301 52.632 0.00 0.00 0.00 2.32
6050 6493 2.107141 CAAAAACCCGCGCCCAAA 59.893 55.556 0.00 0.00 0.00 3.28
6051 6494 3.917760 CCAAAAACCCGCGCCCAA 61.918 61.111 0.00 0.00 0.00 4.12
6053 6496 4.656117 CACCAAAAACCCGCGCCC 62.656 66.667 0.00 0.00 0.00 6.13
6075 6987 1.690985 CCCTCTCCCTCAACCTCCC 60.691 68.421 0.00 0.00 0.00 4.30
6080 6992 1.690985 CCCTCCCCTCTCCCTCAAC 60.691 68.421 0.00 0.00 0.00 3.18
6086 6998 2.122189 CATCCCCCTCCCCTCTCC 60.122 72.222 0.00 0.00 0.00 3.71
6102 7014 3.349107 ACCCCAATATATCCCTATCCCCA 59.651 47.826 0.00 0.00 0.00 4.96
6108 7020 4.355588 CCACCAAACCCCAATATATCCCTA 59.644 45.833 0.00 0.00 0.00 3.53
6109 7021 3.142028 CCACCAAACCCCAATATATCCCT 59.858 47.826 0.00 0.00 0.00 4.20
6177 7089 2.603473 CGTGACACCTCCCTCCCA 60.603 66.667 0.00 0.00 0.00 4.37
6194 7106 3.730761 CTTGTCAGCTGCCACCGC 61.731 66.667 9.47 0.00 0.00 5.68
6195 7107 3.052082 CCTTGTCAGCTGCCACCG 61.052 66.667 9.47 0.00 0.00 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.