Multiple sequence alignment - TraesCS7D01G445700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G445700 chr7D 100.000 3489 0 0 1 3489 566518892 566522380 0.000000e+00 6444.0
1 TraesCS7D01G445700 chr7D 81.006 358 63 3 1909 2265 602292678 602293031 2.650000e-71 279.0
2 TraesCS7D01G445700 chr7D 89.091 55 4 2 435 489 240812992 240812940 2.250000e-07 67.6
3 TraesCS7D01G445700 chr7B 91.392 1394 84 14 1874 3237 620678217 620676830 0.000000e+00 1877.0
4 TraesCS7D01G445700 chr7B 89.886 1493 95 32 472 1957 620679628 620678185 0.000000e+00 1869.0
5 TraesCS7D01G445700 chr7B 90.980 255 16 3 3236 3489 620676784 620676536 1.550000e-88 337.0
6 TraesCS7D01G445700 chr7A 94.426 897 40 9 2600 3486 652702960 652703856 0.000000e+00 1371.0
7 TraesCS7D01G445700 chr7A 94.545 495 26 1 1472 1965 652701848 652702342 0.000000e+00 763.0
8 TraesCS7D01G445700 chr7A 91.898 469 31 4 2110 2574 652702496 652702961 0.000000e+00 649.0
9 TraesCS7D01G445700 chr7A 89.381 226 16 7 472 693 652700781 652701002 9.540000e-71 278.0
10 TraesCS7D01G445700 chr7A 90.789 152 7 5 775 924 652701022 652701168 2.750000e-46 196.0
11 TraesCS7D01G445700 chr6B 78.215 2107 322 73 1022 3066 718597889 718595858 0.000000e+00 1221.0
12 TraesCS7D01G445700 chr6B 75.130 1150 232 28 1057 2193 718591611 718590503 1.130000e-134 490.0
13 TraesCS7D01G445700 chr6B 74.052 844 175 34 1018 1840 718252631 718253451 4.380000e-79 305.0
14 TraesCS7D01G445700 chr6B 74.112 873 166 43 1066 1894 718592596 718591740 4.380000e-79 305.0
15 TraesCS7D01G445700 chr6B 73.744 796 173 33 1044 1825 718256160 718256933 2.650000e-71 279.0
16 TraesCS7D01G445700 chr6B 81.818 341 55 4 1909 2244 718593371 718593033 2.650000e-71 279.0
17 TraesCS7D01G445700 chr6B 79.449 399 64 13 1478 1865 30341701 30341310 2.060000e-67 267.0
18 TraesCS7D01G445700 chr1A 77.868 1473 241 52 1033 2465 551311287 551312714 0.000000e+00 835.0
19 TraesCS7D01G445700 chr1A 75.520 1442 270 51 1025 2444 551307356 551308736 6.360000e-177 630.0
20 TraesCS7D01G445700 chr3D 96.796 437 12 2 1 435 161603615 161604051 0.000000e+00 728.0
21 TraesCS7D01G445700 chr3D 96.560 436 12 3 2 435 545600254 545600688 0.000000e+00 719.0
22 TraesCS7D01G445700 chr3D 96.110 437 15 2 1 436 545612992 545613427 0.000000e+00 712.0
23 TraesCS7D01G445700 chr3D 95.662 438 17 2 1 437 533018456 533018892 0.000000e+00 702.0
24 TraesCS7D01G445700 chr3D 95.000 440 20 2 1 438 183193150 183192711 0.000000e+00 689.0
25 TraesCS7D01G445700 chr1D 96.128 439 15 2 1 437 337405948 337405510 0.000000e+00 715.0
26 TraesCS7D01G445700 chr1D 75.738 1422 252 57 1044 2444 458872270 458873619 2.290000e-176 628.0
27 TraesCS7D01G445700 chr1D 93.617 47 2 1 436 482 110006561 110006606 6.250000e-08 69.4
28 TraesCS7D01G445700 chr1D 91.837 49 4 0 435 483 300104841 300104793 6.250000e-08 69.4
29 TraesCS7D01G445700 chr5D 95.900 439 16 2 1 437 444603109 444602671 0.000000e+00 710.0
30 TraesCS7D01G445700 chr5D 94.761 439 21 2 1 437 229419769 229420207 0.000000e+00 682.0
31 TraesCS7D01G445700 chr5D 94.749 438 21 2 1 436 299237394 299236957 0.000000e+00 680.0
32 TraesCS7D01G445700 chr5D 76.146 851 176 19 1029 1865 423535319 423534482 4.160000e-114 422.0
33 TraesCS7D01G445700 chr5D 75.637 353 55 19 2375 2714 47533306 47533640 2.810000e-31 147.0
34 TraesCS7D01G445700 chr2D 95.890 438 16 2 1 436 141553620 141554057 0.000000e+00 708.0
35 TraesCS7D01G445700 chr2D 95.652 437 16 3 1 435 131325564 131325129 0.000000e+00 699.0
36 TraesCS7D01G445700 chr2D 94.773 440 20 3 1 438 450709126 450708688 0.000000e+00 682.0
37 TraesCS7D01G445700 chr2D 88.889 54 4 2 436 489 587806616 587806565 8.080000e-07 65.8
38 TraesCS7D01G445700 chr2D 88.889 54 4 2 436 489 587807231 587807180 8.080000e-07 65.8
39 TraesCS7D01G445700 chr5A 76.762 1149 228 23 1116 2256 621847554 621848671 1.070000e-169 606.0
40 TraesCS7D01G445700 chr1B 78.934 807 138 16 1467 2267 630741719 630742499 1.440000e-143 520.0
41 TraesCS7D01G445700 chr1B 95.652 46 1 1 437 482 529857744 529857700 4.830000e-09 73.1
42 TraesCS7D01G445700 chr6D 77.737 822 140 26 1024 1832 464651326 464652117 6.820000e-127 464.0
43 TraesCS7D01G445700 chr6D 91.837 49 4 0 435 483 275371437 275371485 6.250000e-08 69.4
44 TraesCS7D01G445700 chr5B 76.032 872 176 26 1010 1865 511372910 511372056 4.160000e-114 422.0
45 TraesCS7D01G445700 chr5B 89.091 55 4 2 435 489 67387585 67387533 2.250000e-07 67.6
46 TraesCS7D01G445700 chrUn 75.322 855 168 33 1039 1865 87219817 87220656 1.530000e-98 370.0
47 TraesCS7D01G445700 chr6A 82.759 145 22 3 1018 1160 616892487 616892344 3.660000e-25 126.0
48 TraesCS7D01G445700 chr2B 95.349 43 2 0 435 477 6473163 6473205 6.250000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G445700 chr7D 566518892 566522380 3488 False 6444.00 6444 100.000000 1 3489 1 chr7D.!!$F1 3488
1 TraesCS7D01G445700 chr7B 620676536 620679628 3092 True 1361.00 1877 90.752667 472 3489 3 chr7B.!!$R1 3017
2 TraesCS7D01G445700 chr7A 652700781 652703856 3075 False 651.40 1371 92.207800 472 3486 5 chr7A.!!$F1 3014
3 TraesCS7D01G445700 chr6B 718590503 718597889 7386 True 573.75 1221 77.318750 1022 3066 4 chr6B.!!$R2 2044
4 TraesCS7D01G445700 chr6B 718252631 718256933 4302 False 292.00 305 73.898000 1018 1840 2 chr6B.!!$F1 822
5 TraesCS7D01G445700 chr1A 551307356 551312714 5358 False 732.50 835 76.694000 1025 2465 2 chr1A.!!$F1 1440
6 TraesCS7D01G445700 chr1D 458872270 458873619 1349 False 628.00 628 75.738000 1044 2444 1 chr1D.!!$F2 1400
7 TraesCS7D01G445700 chr5D 423534482 423535319 837 True 422.00 422 76.146000 1029 1865 1 chr5D.!!$R2 836
8 TraesCS7D01G445700 chr5A 621847554 621848671 1117 False 606.00 606 76.762000 1116 2256 1 chr5A.!!$F1 1140
9 TraesCS7D01G445700 chr1B 630741719 630742499 780 False 520.00 520 78.934000 1467 2267 1 chr1B.!!$F1 800
10 TraesCS7D01G445700 chr6D 464651326 464652117 791 False 464.00 464 77.737000 1024 1832 1 chr6D.!!$F2 808
11 TraesCS7D01G445700 chr5B 511372056 511372910 854 True 422.00 422 76.032000 1010 1865 1 chr5B.!!$R2 855
12 TraesCS7D01G445700 chrUn 87219817 87220656 839 False 370.00 370 75.322000 1039 1865 1 chrUn.!!$F1 826

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
366 367 0.034863 TTATCCCGTTTCCAGGCACC 60.035 55.0 0.00 0.0 0.00 5.01 F
426 427 0.105964 TGGCATATGTCGCACCTACC 59.894 55.0 2.28 0.0 0.00 3.18 F
431 432 0.173935 TATGTCGCACCTACCAACCG 59.826 55.0 0.00 0.0 0.00 4.44 F
1294 1313 0.735287 GCCGACTACGTTTCCCTCAC 60.735 60.0 0.00 0.0 37.88 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1580 2274 0.248377 GATCGCTGAAATGCTGGTGC 60.248 55.0 0.0 0.0 40.20 5.01 R
2053 6698 0.387202 CCGAGCTGACACCTATGAGG 59.613 60.0 0.0 0.0 42.49 3.86 R
2122 6767 1.075542 TAAACTCAATGCACGCCTCG 58.924 50.0 0.0 0.0 0.00 4.63 R
2850 7571 1.241315 CCTTTTGGGTACAGGGCACG 61.241 60.0 0.0 0.0 35.46 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 4.760047 GGCAGAGAAGCCGGCGAA 62.760 66.667 23.20 0.00 46.12 4.70
38 39 3.491652 GCAGAGAAGCCGGCGAAC 61.492 66.667 23.20 16.30 0.00 3.95
39 40 2.048222 CAGAGAAGCCGGCGAACA 60.048 61.111 23.20 0.00 0.00 3.18
40 41 2.048127 AGAGAAGCCGGCGAACAC 60.048 61.111 23.20 14.58 0.00 3.32
41 42 2.357034 GAGAAGCCGGCGAACACA 60.357 61.111 23.20 0.00 0.00 3.72
42 43 2.357517 AGAAGCCGGCGAACACAG 60.358 61.111 23.20 0.00 0.00 3.66
43 44 2.357034 GAAGCCGGCGAACACAGA 60.357 61.111 23.20 0.00 0.00 3.41
44 45 2.665185 AAGCCGGCGAACACAGAC 60.665 61.111 23.20 0.00 0.00 3.51
45 46 3.454587 AAGCCGGCGAACACAGACA 62.455 57.895 23.20 0.00 0.00 3.41
46 47 3.712881 GCCGGCGAACACAGACAC 61.713 66.667 12.58 0.00 0.00 3.67
47 48 2.029073 CCGGCGAACACAGACACT 59.971 61.111 9.30 0.00 0.00 3.55
48 49 2.310233 CCGGCGAACACAGACACTG 61.310 63.158 9.30 0.00 37.52 3.66
49 50 1.299850 CGGCGAACACAGACACTGA 60.300 57.895 0.00 0.00 35.18 3.41
50 51 1.548973 CGGCGAACACAGACACTGAC 61.549 60.000 0.00 0.00 35.18 3.51
51 52 1.548973 GGCGAACACAGACACTGACG 61.549 60.000 5.76 6.83 35.18 4.35
52 53 1.548973 GCGAACACAGACACTGACGG 61.549 60.000 5.76 0.00 35.18 4.79
53 54 1.548973 CGAACACAGACACTGACGGC 61.549 60.000 5.76 0.00 35.18 5.68
54 55 0.249489 GAACACAGACACTGACGGCT 60.249 55.000 5.76 0.00 35.18 5.52
55 56 0.530650 AACACAGACACTGACGGCTG 60.531 55.000 5.76 0.00 35.18 4.85
56 57 1.665916 CACAGACACTGACGGCTGG 60.666 63.158 0.00 0.00 35.18 4.85
57 58 2.047844 CAGACACTGACGGCTGGG 60.048 66.667 0.00 0.00 32.44 4.45
58 59 2.203640 AGACACTGACGGCTGGGA 60.204 61.111 3.60 0.00 0.00 4.37
59 60 2.048127 GACACTGACGGCTGGGAC 60.048 66.667 3.60 0.00 0.00 4.46
60 61 3.591254 GACACTGACGGCTGGGACC 62.591 68.421 3.60 0.00 0.00 4.46
61 62 4.394712 CACTGACGGCTGGGACCC 62.395 72.222 2.45 2.45 0.00 4.46
80 81 4.169696 CGCCCAGCCGGATTACCA 62.170 66.667 5.05 0.00 35.59 3.25
81 82 2.515901 GCCCAGCCGGATTACCAT 59.484 61.111 5.05 0.00 35.59 3.55
82 83 1.152756 GCCCAGCCGGATTACCATT 60.153 57.895 5.05 0.00 35.59 3.16
83 84 1.455383 GCCCAGCCGGATTACCATTG 61.455 60.000 5.05 0.00 35.59 2.82
84 85 0.106719 CCCAGCCGGATTACCATTGT 60.107 55.000 5.05 0.00 35.59 2.71
85 86 1.142060 CCCAGCCGGATTACCATTGTA 59.858 52.381 5.05 0.00 35.59 2.41
86 87 2.224769 CCCAGCCGGATTACCATTGTAT 60.225 50.000 5.05 0.00 35.59 2.29
87 88 3.074412 CCAGCCGGATTACCATTGTATC 58.926 50.000 5.05 0.00 35.59 2.24
88 89 3.074412 CAGCCGGATTACCATTGTATCC 58.926 50.000 5.05 0.00 35.59 2.59
89 90 2.039879 AGCCGGATTACCATTGTATCCC 59.960 50.000 5.05 0.00 35.59 3.85
90 91 2.039879 GCCGGATTACCATTGTATCCCT 59.960 50.000 5.05 0.00 35.59 4.20
91 92 3.674997 CCGGATTACCATTGTATCCCTG 58.325 50.000 0.00 0.00 35.59 4.45
92 93 3.559171 CCGGATTACCATTGTATCCCTGG 60.559 52.174 0.00 0.00 35.59 4.45
93 94 3.559171 CGGATTACCATTGTATCCCTGGG 60.559 52.174 6.33 6.33 34.21 4.45
94 95 3.245264 GGATTACCATTGTATCCCTGGGG 60.245 52.174 14.00 2.42 34.21 4.96
95 96 1.827792 TACCATTGTATCCCTGGGGG 58.172 55.000 14.00 6.64 46.11 5.40
112 113 2.485659 GGGGGTAGGCCTATATAACCC 58.514 57.143 26.92 26.92 46.70 4.11
114 115 2.485659 GGGTAGGCCTATATAACCCCC 58.514 57.143 25.20 20.00 43.42 5.40
141 142 1.856629 CCCATGCAAAGGGTTGATCT 58.143 50.000 17.30 0.00 41.61 2.75
142 143 1.753073 CCCATGCAAAGGGTTGATCTC 59.247 52.381 17.30 0.00 41.61 2.75
143 144 2.622452 CCCATGCAAAGGGTTGATCTCT 60.622 50.000 17.30 0.00 41.61 3.10
144 145 3.094572 CCATGCAAAGGGTTGATCTCTT 58.905 45.455 0.00 0.00 38.72 2.85
145 146 4.272489 CCATGCAAAGGGTTGATCTCTTA 58.728 43.478 0.00 0.00 35.54 2.10
146 147 4.337555 CCATGCAAAGGGTTGATCTCTTAG 59.662 45.833 0.00 0.00 35.54 2.18
147 148 4.908601 TGCAAAGGGTTGATCTCTTAGA 57.091 40.909 0.00 0.00 35.54 2.10
148 149 4.836825 TGCAAAGGGTTGATCTCTTAGAG 58.163 43.478 2.23 2.23 35.54 2.43
149 150 4.287067 TGCAAAGGGTTGATCTCTTAGAGT 59.713 41.667 9.25 0.00 35.54 3.24
150 151 5.221925 TGCAAAGGGTTGATCTCTTAGAGTT 60.222 40.000 9.25 0.31 35.54 3.01
151 152 5.707764 GCAAAGGGTTGATCTCTTAGAGTTT 59.292 40.000 9.25 0.00 35.54 2.66
152 153 6.207614 GCAAAGGGTTGATCTCTTAGAGTTTT 59.792 38.462 9.25 0.00 35.54 2.43
153 154 7.390718 GCAAAGGGTTGATCTCTTAGAGTTTTA 59.609 37.037 9.25 0.00 35.54 1.52
154 155 8.940952 CAAAGGGTTGATCTCTTAGAGTTTTAG 58.059 37.037 9.25 0.00 35.54 1.85
155 156 8.437274 AAGGGTTGATCTCTTAGAGTTTTAGA 57.563 34.615 9.25 0.00 34.71 2.10
156 157 7.842982 AGGGTTGATCTCTTAGAGTTTTAGAC 58.157 38.462 9.25 2.72 0.00 2.59
157 158 7.455008 AGGGTTGATCTCTTAGAGTTTTAGACA 59.545 37.037 9.25 0.00 0.00 3.41
158 159 7.546316 GGGTTGATCTCTTAGAGTTTTAGACAC 59.454 40.741 9.25 0.43 0.00 3.67
159 160 7.546316 GGTTGATCTCTTAGAGTTTTAGACACC 59.454 40.741 9.25 3.08 0.00 4.16
160 161 7.776618 TGATCTCTTAGAGTTTTAGACACCA 57.223 36.000 9.25 0.00 0.00 4.17
161 162 7.603651 TGATCTCTTAGAGTTTTAGACACCAC 58.396 38.462 9.25 0.00 0.00 4.16
162 163 6.010294 TCTCTTAGAGTTTTAGACACCACG 57.990 41.667 9.25 0.00 0.00 4.94
163 164 5.533903 TCTCTTAGAGTTTTAGACACCACGT 59.466 40.000 9.25 0.00 0.00 4.49
164 165 6.712095 TCTCTTAGAGTTTTAGACACCACGTA 59.288 38.462 9.25 0.00 0.00 3.57
165 166 6.906659 TCTTAGAGTTTTAGACACCACGTAG 58.093 40.000 0.00 0.00 0.00 3.51
166 167 6.712095 TCTTAGAGTTTTAGACACCACGTAGA 59.288 38.462 0.00 0.00 0.00 2.59
167 168 5.373981 AGAGTTTTAGACACCACGTAGAG 57.626 43.478 0.00 0.00 0.00 2.43
168 169 5.068636 AGAGTTTTAGACACCACGTAGAGA 58.931 41.667 0.00 0.00 0.00 3.10
169 170 5.181622 AGAGTTTTAGACACCACGTAGAGAG 59.818 44.000 0.00 0.00 0.00 3.20
170 171 5.068636 AGTTTTAGACACCACGTAGAGAGA 58.931 41.667 0.00 0.00 0.00 3.10
171 172 5.533903 AGTTTTAGACACCACGTAGAGAGAA 59.466 40.000 0.00 0.00 0.00 2.87
172 173 6.040166 AGTTTTAGACACCACGTAGAGAGAAA 59.960 38.462 0.00 0.00 0.00 2.52
173 174 6.395426 TTTAGACACCACGTAGAGAGAAAA 57.605 37.500 0.00 0.00 0.00 2.29
174 175 4.506886 AGACACCACGTAGAGAGAAAAG 57.493 45.455 0.00 0.00 0.00 2.27
175 176 3.256136 AGACACCACGTAGAGAGAAAAGG 59.744 47.826 0.00 0.00 0.00 3.11
176 177 3.228453 ACACCACGTAGAGAGAAAAGGA 58.772 45.455 0.00 0.00 0.00 3.36
177 178 3.256136 ACACCACGTAGAGAGAAAAGGAG 59.744 47.826 0.00 0.00 0.00 3.69
178 179 3.506455 CACCACGTAGAGAGAAAAGGAGA 59.494 47.826 0.00 0.00 0.00 3.71
179 180 3.759618 ACCACGTAGAGAGAAAAGGAGAG 59.240 47.826 0.00 0.00 0.00 3.20
180 181 3.428316 CCACGTAGAGAGAAAAGGAGAGC 60.428 52.174 0.00 0.00 0.00 4.09
181 182 3.442273 CACGTAGAGAGAAAAGGAGAGCT 59.558 47.826 0.00 0.00 0.00 4.09
182 183 4.636648 CACGTAGAGAGAAAAGGAGAGCTA 59.363 45.833 0.00 0.00 0.00 3.32
183 184 4.879545 ACGTAGAGAGAAAAGGAGAGCTAG 59.120 45.833 0.00 0.00 0.00 3.42
184 185 4.261031 CGTAGAGAGAAAAGGAGAGCTAGC 60.261 50.000 6.62 6.62 0.00 3.42
185 186 3.031013 AGAGAGAAAAGGAGAGCTAGCC 58.969 50.000 12.13 2.81 0.00 3.93
186 187 3.031013 GAGAGAAAAGGAGAGCTAGCCT 58.969 50.000 12.13 8.35 35.61 4.58
187 188 3.449918 AGAGAAAAGGAGAGCTAGCCTT 58.550 45.455 12.13 12.58 46.09 4.35
188 189 3.197549 AGAGAAAAGGAGAGCTAGCCTTG 59.802 47.826 17.63 0.00 43.46 3.61
189 190 2.013400 GAAAAGGAGAGCTAGCCTTGC 58.987 52.381 17.63 5.22 43.46 4.01
190 191 0.254462 AAAGGAGAGCTAGCCTTGCC 59.746 55.000 17.63 8.23 43.46 4.52
191 192 1.631071 AAGGAGAGCTAGCCTTGCCC 61.631 60.000 16.52 6.13 42.67 5.36
192 193 2.069430 GGAGAGCTAGCCTTGCCCT 61.069 63.158 12.13 0.00 0.00 5.19
193 194 1.631071 GGAGAGCTAGCCTTGCCCTT 61.631 60.000 12.13 0.00 0.00 3.95
194 195 0.179059 GAGAGCTAGCCTTGCCCTTC 60.179 60.000 12.13 0.00 0.00 3.46
195 196 0.620121 AGAGCTAGCCTTGCCCTTCT 60.620 55.000 12.13 1.71 0.00 2.85
196 197 0.254462 GAGCTAGCCTTGCCCTTCTT 59.746 55.000 12.13 0.00 0.00 2.52
197 198 0.254462 AGCTAGCCTTGCCCTTCTTC 59.746 55.000 12.13 0.00 0.00 2.87
198 199 0.254462 GCTAGCCTTGCCCTTCTTCT 59.746 55.000 2.29 0.00 0.00 2.85
199 200 1.340502 GCTAGCCTTGCCCTTCTTCTT 60.341 52.381 2.29 0.00 0.00 2.52
200 201 2.637947 CTAGCCTTGCCCTTCTTCTTC 58.362 52.381 0.00 0.00 0.00 2.87
201 202 0.038890 AGCCTTGCCCTTCTTCTTCC 59.961 55.000 0.00 0.00 0.00 3.46
202 203 0.038890 GCCTTGCCCTTCTTCTTCCT 59.961 55.000 0.00 0.00 0.00 3.36
203 204 1.952839 GCCTTGCCCTTCTTCTTCCTC 60.953 57.143 0.00 0.00 0.00 3.71
204 205 1.632920 CCTTGCCCTTCTTCTTCCTCT 59.367 52.381 0.00 0.00 0.00 3.69
205 206 2.840651 CCTTGCCCTTCTTCTTCCTCTA 59.159 50.000 0.00 0.00 0.00 2.43
206 207 3.457749 CCTTGCCCTTCTTCTTCCTCTAT 59.542 47.826 0.00 0.00 0.00 1.98
207 208 4.444164 CCTTGCCCTTCTTCTTCCTCTATC 60.444 50.000 0.00 0.00 0.00 2.08
208 209 3.041946 TGCCCTTCTTCTTCCTCTATCC 58.958 50.000 0.00 0.00 0.00 2.59
209 210 3.041946 GCCCTTCTTCTTCCTCTATCCA 58.958 50.000 0.00 0.00 0.00 3.41
210 211 3.456277 GCCCTTCTTCTTCCTCTATCCAA 59.544 47.826 0.00 0.00 0.00 3.53
211 212 4.080299 GCCCTTCTTCTTCCTCTATCCAAA 60.080 45.833 0.00 0.00 0.00 3.28
212 213 5.432645 CCCTTCTTCTTCCTCTATCCAAAC 58.567 45.833 0.00 0.00 0.00 2.93
213 214 5.045578 CCCTTCTTCTTCCTCTATCCAAACA 60.046 44.000 0.00 0.00 0.00 2.83
214 215 6.112058 CCTTCTTCTTCCTCTATCCAAACAG 58.888 44.000 0.00 0.00 0.00 3.16
215 216 5.091261 TCTTCTTCCTCTATCCAAACAGC 57.909 43.478 0.00 0.00 0.00 4.40
216 217 4.780021 TCTTCTTCCTCTATCCAAACAGCT 59.220 41.667 0.00 0.00 0.00 4.24
217 218 4.744795 TCTTCCTCTATCCAAACAGCTC 57.255 45.455 0.00 0.00 0.00 4.09
218 219 4.096681 TCTTCCTCTATCCAAACAGCTCA 58.903 43.478 0.00 0.00 0.00 4.26
219 220 4.532126 TCTTCCTCTATCCAAACAGCTCAA 59.468 41.667 0.00 0.00 0.00 3.02
220 221 4.478206 TCCTCTATCCAAACAGCTCAAG 57.522 45.455 0.00 0.00 0.00 3.02
221 222 3.198635 TCCTCTATCCAAACAGCTCAAGG 59.801 47.826 0.00 0.00 0.00 3.61
222 223 3.198635 CCTCTATCCAAACAGCTCAAGGA 59.801 47.826 0.00 0.00 0.00 3.36
223 224 4.440880 CTCTATCCAAACAGCTCAAGGAG 58.559 47.826 0.00 0.00 0.00 3.69
234 235 2.307934 CTCAAGGAGCCTCTTGTAGC 57.692 55.000 13.95 0.00 43.25 3.58
235 236 1.830477 CTCAAGGAGCCTCTTGTAGCT 59.170 52.381 13.95 0.00 43.25 3.32
236 237 3.027412 CTCAAGGAGCCTCTTGTAGCTA 58.973 50.000 13.95 0.00 43.25 3.32
237 238 2.761208 TCAAGGAGCCTCTTGTAGCTAC 59.239 50.000 17.30 17.30 43.25 3.58
238 239 2.838637 AGGAGCCTCTTGTAGCTACT 57.161 50.000 23.84 2.22 45.74 2.57
240 241 3.172229 GGAGCCTCTTGTAGCTACTTG 57.828 52.381 23.84 15.92 40.11 3.16
241 242 2.498078 GGAGCCTCTTGTAGCTACTTGT 59.502 50.000 23.84 2.74 40.11 3.16
242 243 3.700038 GGAGCCTCTTGTAGCTACTTGTA 59.300 47.826 23.84 1.27 40.11 2.41
243 244 4.342665 GGAGCCTCTTGTAGCTACTTGTAT 59.657 45.833 23.84 5.06 40.11 2.29
244 245 5.163395 GGAGCCTCTTGTAGCTACTTGTATT 60.163 44.000 23.84 5.37 40.11 1.89
245 246 5.665459 AGCCTCTTGTAGCTACTTGTATTG 58.335 41.667 23.84 8.36 37.64 1.90
246 247 5.422331 AGCCTCTTGTAGCTACTTGTATTGA 59.578 40.000 23.84 10.39 37.64 2.57
247 248 6.098982 AGCCTCTTGTAGCTACTTGTATTGAT 59.901 38.462 23.84 3.80 37.64 2.57
248 249 6.422400 GCCTCTTGTAGCTACTTGTATTGATC 59.578 42.308 23.84 1.57 0.00 2.92
249 250 7.685641 GCCTCTTGTAGCTACTTGTATTGATCT 60.686 40.741 23.84 0.00 0.00 2.75
250 251 8.851145 CCTCTTGTAGCTACTTGTATTGATCTA 58.149 37.037 23.84 0.00 0.00 1.98
251 252 9.891828 CTCTTGTAGCTACTTGTATTGATCTAG 57.108 37.037 23.84 0.77 0.00 2.43
252 253 9.409918 TCTTGTAGCTACTTGTATTGATCTAGT 57.590 33.333 23.84 0.00 0.00 2.57
253 254 9.457110 CTTGTAGCTACTTGTATTGATCTAGTG 57.543 37.037 23.84 0.00 0.00 2.74
254 255 8.747538 TGTAGCTACTTGTATTGATCTAGTGA 57.252 34.615 23.84 0.00 0.00 3.41
255 256 9.355916 TGTAGCTACTTGTATTGATCTAGTGAT 57.644 33.333 23.84 0.00 35.26 3.06
256 257 9.834628 GTAGCTACTTGTATTGATCTAGTGATC 57.165 37.037 16.88 0.00 46.89 2.92
266 267 3.832276 GATCTAGTGATCATGCGGAGAC 58.168 50.000 0.00 0.00 46.20 3.36
267 268 1.957177 TCTAGTGATCATGCGGAGACC 59.043 52.381 0.00 0.00 0.00 3.85
268 269 1.000283 CTAGTGATCATGCGGAGACCC 60.000 57.143 0.00 0.00 0.00 4.46
278 279 4.154347 GGAGACCCGCAGAGCAGG 62.154 72.222 0.00 0.00 31.46 4.85
279 280 3.071206 GAGACCCGCAGAGCAGGA 61.071 66.667 0.00 0.00 29.54 3.86
280 281 2.364842 AGACCCGCAGAGCAGGAT 60.365 61.111 0.00 0.00 29.54 3.24
281 282 1.965754 GAGACCCGCAGAGCAGGATT 61.966 60.000 0.00 0.00 29.54 3.01
282 283 0.687757 AGACCCGCAGAGCAGGATTA 60.688 55.000 0.00 0.00 29.54 1.75
283 284 0.249657 GACCCGCAGAGCAGGATTAG 60.250 60.000 0.00 0.00 29.54 1.73
284 285 1.070445 CCCGCAGAGCAGGATTAGG 59.930 63.158 0.00 0.00 0.00 2.69
285 286 1.070445 CCGCAGAGCAGGATTAGGG 59.930 63.158 0.00 0.00 0.00 3.53
286 287 1.070445 CGCAGAGCAGGATTAGGGG 59.930 63.158 0.00 0.00 0.00 4.79
287 288 1.690219 CGCAGAGCAGGATTAGGGGT 61.690 60.000 0.00 0.00 0.00 4.95
288 289 0.179034 GCAGAGCAGGATTAGGGGTG 60.179 60.000 0.00 0.00 0.00 4.61
289 290 1.207791 CAGAGCAGGATTAGGGGTGT 58.792 55.000 0.00 0.00 0.00 4.16
290 291 1.561542 CAGAGCAGGATTAGGGGTGTT 59.438 52.381 0.00 0.00 0.00 3.32
291 292 2.771943 CAGAGCAGGATTAGGGGTGTTA 59.228 50.000 0.00 0.00 0.00 2.41
292 293 3.392616 CAGAGCAGGATTAGGGGTGTTAT 59.607 47.826 0.00 0.00 0.00 1.89
293 294 3.648545 AGAGCAGGATTAGGGGTGTTATC 59.351 47.826 0.00 0.00 0.00 1.75
294 295 3.648545 GAGCAGGATTAGGGGTGTTATCT 59.351 47.826 0.00 0.00 0.00 1.98
295 296 4.047883 AGCAGGATTAGGGGTGTTATCTT 58.952 43.478 0.00 0.00 0.00 2.40
296 297 4.103311 AGCAGGATTAGGGGTGTTATCTTC 59.897 45.833 0.00 0.00 0.00 2.87
297 298 4.141482 GCAGGATTAGGGGTGTTATCTTCA 60.141 45.833 0.00 0.00 0.00 3.02
298 299 5.456763 GCAGGATTAGGGGTGTTATCTTCAT 60.457 44.000 0.00 0.00 0.00 2.57
299 300 6.000219 CAGGATTAGGGGTGTTATCTTCATG 59.000 44.000 0.00 0.00 0.00 3.07
300 301 5.073691 AGGATTAGGGGTGTTATCTTCATGG 59.926 44.000 0.00 0.00 0.00 3.66
301 302 5.073144 GGATTAGGGGTGTTATCTTCATGGA 59.927 44.000 0.00 0.00 0.00 3.41
302 303 5.630415 TTAGGGGTGTTATCTTCATGGAG 57.370 43.478 0.00 0.00 0.00 3.86
303 304 3.736094 AGGGGTGTTATCTTCATGGAGA 58.264 45.455 6.06 6.06 0.00 3.71
304 305 3.713764 AGGGGTGTTATCTTCATGGAGAG 59.286 47.826 10.13 0.00 0.00 3.20
305 306 3.471680 GGGTGTTATCTTCATGGAGAGC 58.528 50.000 10.13 3.21 0.00 4.09
306 307 3.471680 GGTGTTATCTTCATGGAGAGCC 58.528 50.000 10.13 3.15 0.00 4.70
307 308 3.471680 GTGTTATCTTCATGGAGAGCCC 58.528 50.000 10.13 0.02 0.00 5.19
308 309 2.439507 TGTTATCTTCATGGAGAGCCCC 59.560 50.000 10.13 0.00 0.00 5.80
309 310 1.342074 TATCTTCATGGAGAGCCCCG 58.658 55.000 10.13 0.00 0.00 5.73
310 311 0.399091 ATCTTCATGGAGAGCCCCGA 60.399 55.000 10.13 0.00 0.00 5.14
311 312 0.617535 TCTTCATGGAGAGCCCCGAA 60.618 55.000 0.00 0.00 0.00 4.30
312 313 0.462759 CTTCATGGAGAGCCCCGAAC 60.463 60.000 0.00 0.00 0.00 3.95
313 314 1.910580 TTCATGGAGAGCCCCGAACC 61.911 60.000 0.00 0.00 0.00 3.62
314 315 2.041265 ATGGAGAGCCCCGAACCT 59.959 61.111 0.00 0.00 0.00 3.50
315 316 2.370445 ATGGAGAGCCCCGAACCTG 61.370 63.158 0.00 0.00 0.00 4.00
316 317 3.787001 GGAGAGCCCCGAACCTGG 61.787 72.222 0.00 0.00 0.00 4.45
325 326 2.327200 CCCGAACCTGGGTAAGATTC 57.673 55.000 0.00 0.00 44.76 2.52
326 327 1.472728 CCCGAACCTGGGTAAGATTCG 60.473 57.143 7.63 7.63 44.76 3.34
327 328 1.287425 CGAACCTGGGTAAGATTCGC 58.713 55.000 0.00 0.00 36.16 4.70
328 329 1.664873 GAACCTGGGTAAGATTCGCC 58.335 55.000 0.00 0.00 0.00 5.54
329 330 0.107848 AACCTGGGTAAGATTCGCCG 60.108 55.000 0.00 0.00 0.00 6.46
330 331 0.974010 ACCTGGGTAAGATTCGCCGA 60.974 55.000 0.00 0.00 0.00 5.54
331 332 0.529992 CCTGGGTAAGATTCGCCGAC 60.530 60.000 0.00 0.00 0.00 4.79
332 333 0.870307 CTGGGTAAGATTCGCCGACG 60.870 60.000 0.00 0.00 42.01 5.12
333 334 1.140375 GGGTAAGATTCGCCGACGT 59.860 57.895 0.00 0.00 41.18 4.34
334 335 1.143969 GGGTAAGATTCGCCGACGTG 61.144 60.000 0.00 0.00 41.18 4.49
335 336 1.629504 GTAAGATTCGCCGACGTGC 59.370 57.895 0.00 0.00 41.18 5.34
336 337 1.074319 GTAAGATTCGCCGACGTGCA 61.074 55.000 0.00 0.00 41.18 4.57
337 338 0.179121 TAAGATTCGCCGACGTGCAT 60.179 50.000 0.00 0.00 41.18 3.96
338 339 1.695893 AAGATTCGCCGACGTGCATG 61.696 55.000 3.82 3.82 41.18 4.06
339 340 2.434185 ATTCGCCGACGTGCATGT 60.434 55.556 12.38 12.38 41.18 3.21
340 341 2.348140 GATTCGCCGACGTGCATGTC 62.348 60.000 26.13 26.13 41.18 3.06
341 342 2.835701 ATTCGCCGACGTGCATGTCT 62.836 55.000 30.85 12.99 41.18 3.41
342 343 3.112075 CGCCGACGTGCATGTCTT 61.112 61.111 30.85 2.18 36.71 3.01
343 344 2.778679 GCCGACGTGCATGTCTTC 59.221 61.111 30.85 20.29 36.71 2.87
344 345 3.071459 GCCGACGTGCATGTCTTCG 62.071 63.158 30.85 20.98 36.71 3.79
345 346 2.391821 CGACGTGCATGTCTTCGC 59.608 61.111 30.85 10.54 36.71 4.70
346 347 2.778679 GACGTGCATGTCTTCGCC 59.221 61.111 28.09 4.68 35.95 5.54
347 348 1.738099 GACGTGCATGTCTTCGCCT 60.738 57.895 28.09 0.00 35.95 5.52
348 349 1.291877 GACGTGCATGTCTTCGCCTT 61.292 55.000 28.09 0.00 35.95 4.35
349 350 0.037697 ACGTGCATGTCTTCGCCTTA 60.038 50.000 5.51 0.00 0.00 2.69
350 351 1.290203 CGTGCATGTCTTCGCCTTAT 58.710 50.000 0.00 0.00 0.00 1.73
351 352 1.258982 CGTGCATGTCTTCGCCTTATC 59.741 52.381 0.00 0.00 0.00 1.75
352 353 1.599542 GTGCATGTCTTCGCCTTATCC 59.400 52.381 0.00 0.00 0.00 2.59
353 354 1.230324 GCATGTCTTCGCCTTATCCC 58.770 55.000 0.00 0.00 0.00 3.85
354 355 1.502231 CATGTCTTCGCCTTATCCCG 58.498 55.000 0.00 0.00 0.00 5.14
355 356 1.120530 ATGTCTTCGCCTTATCCCGT 58.879 50.000 0.00 0.00 0.00 5.28
356 357 0.899720 TGTCTTCGCCTTATCCCGTT 59.100 50.000 0.00 0.00 0.00 4.44
357 358 1.276989 TGTCTTCGCCTTATCCCGTTT 59.723 47.619 0.00 0.00 0.00 3.60
358 359 1.931841 GTCTTCGCCTTATCCCGTTTC 59.068 52.381 0.00 0.00 0.00 2.78
359 360 1.134610 TCTTCGCCTTATCCCGTTTCC 60.135 52.381 0.00 0.00 0.00 3.13
360 361 0.614294 TTCGCCTTATCCCGTTTCCA 59.386 50.000 0.00 0.00 0.00 3.53
361 362 0.177141 TCGCCTTATCCCGTTTCCAG 59.823 55.000 0.00 0.00 0.00 3.86
362 363 0.814010 CGCCTTATCCCGTTTCCAGG 60.814 60.000 0.00 0.00 0.00 4.45
363 364 1.101635 GCCTTATCCCGTTTCCAGGC 61.102 60.000 0.00 0.00 40.13 4.85
364 365 0.254747 CCTTATCCCGTTTCCAGGCA 59.745 55.000 0.00 0.00 0.00 4.75
365 366 1.379527 CTTATCCCGTTTCCAGGCAC 58.620 55.000 0.00 0.00 0.00 5.01
366 367 0.034863 TTATCCCGTTTCCAGGCACC 60.035 55.000 0.00 0.00 0.00 5.01
367 368 2.246761 TATCCCGTTTCCAGGCACCG 62.247 60.000 0.00 0.00 0.00 4.94
372 373 4.028490 TTTCCAGGCACCGGCGAT 62.028 61.111 9.30 0.00 42.47 4.58
373 374 4.776322 TTCCAGGCACCGGCGATG 62.776 66.667 9.30 0.65 42.47 3.84
376 377 4.457496 CAGGCACCGGCGATGTCT 62.457 66.667 0.43 0.43 42.47 3.41
377 378 3.706373 AGGCACCGGCGATGTCTT 61.706 61.111 0.43 0.00 42.47 3.01
378 379 2.185867 GGCACCGGCGATGTCTTA 59.814 61.111 9.30 0.00 42.47 2.10
379 380 2.171725 GGCACCGGCGATGTCTTAC 61.172 63.158 9.30 0.00 42.47 2.34
380 381 1.153628 GCACCGGCGATGTCTTACT 60.154 57.895 9.30 0.00 0.00 2.24
381 382 1.421410 GCACCGGCGATGTCTTACTG 61.421 60.000 9.30 0.00 0.00 2.74
382 383 0.806102 CACCGGCGATGTCTTACTGG 60.806 60.000 9.30 0.00 34.56 4.00
383 384 1.883084 CCGGCGATGTCTTACTGGC 60.883 63.158 9.30 0.00 0.00 4.85
384 385 1.141881 CGGCGATGTCTTACTGGCT 59.858 57.895 0.00 0.00 0.00 4.75
385 386 0.872021 CGGCGATGTCTTACTGGCTC 60.872 60.000 0.00 0.00 0.00 4.70
386 387 0.530870 GGCGATGTCTTACTGGCTCC 60.531 60.000 0.00 0.00 0.00 4.70
387 388 0.530870 GCGATGTCTTACTGGCTCCC 60.531 60.000 0.00 0.00 0.00 4.30
388 389 0.824109 CGATGTCTTACTGGCTCCCA 59.176 55.000 0.00 0.00 0.00 4.37
389 390 1.471676 CGATGTCTTACTGGCTCCCAC 60.472 57.143 0.00 0.00 0.00 4.61
390 391 1.555075 GATGTCTTACTGGCTCCCACA 59.445 52.381 0.00 0.00 0.00 4.17
391 392 1.429930 TGTCTTACTGGCTCCCACAA 58.570 50.000 0.00 0.00 0.00 3.33
392 393 1.985159 TGTCTTACTGGCTCCCACAAT 59.015 47.619 0.00 0.00 0.00 2.71
393 394 2.290260 TGTCTTACTGGCTCCCACAATG 60.290 50.000 0.00 0.00 0.00 2.82
394 395 2.027192 GTCTTACTGGCTCCCACAATGA 60.027 50.000 0.00 0.00 0.00 2.57
395 396 2.846206 TCTTACTGGCTCCCACAATGAT 59.154 45.455 0.00 0.00 0.00 2.45
396 397 4.037222 TCTTACTGGCTCCCACAATGATA 58.963 43.478 0.00 0.00 0.00 2.15
397 398 4.473196 TCTTACTGGCTCCCACAATGATAA 59.527 41.667 0.00 0.00 0.00 1.75
398 399 3.287867 ACTGGCTCCCACAATGATAAG 57.712 47.619 0.00 0.00 0.00 1.73
399 400 1.952296 CTGGCTCCCACAATGATAAGC 59.048 52.381 0.00 0.00 0.00 3.09
400 401 1.322442 GGCTCCCACAATGATAAGCC 58.678 55.000 0.00 0.00 42.17 4.35
401 402 1.410083 GGCTCCCACAATGATAAGCCA 60.410 52.381 6.33 0.00 46.72 4.75
402 403 1.678101 GCTCCCACAATGATAAGCCAC 59.322 52.381 0.00 0.00 0.00 5.01
403 404 2.301346 CTCCCACAATGATAAGCCACC 58.699 52.381 0.00 0.00 0.00 4.61
404 405 1.064017 TCCCACAATGATAAGCCACCC 60.064 52.381 0.00 0.00 0.00 4.61
405 406 1.024271 CCACAATGATAAGCCACCCG 58.976 55.000 0.00 0.00 0.00 5.28
406 407 1.681780 CCACAATGATAAGCCACCCGT 60.682 52.381 0.00 0.00 0.00 5.28
407 408 2.091541 CACAATGATAAGCCACCCGTT 58.908 47.619 0.00 0.00 0.00 4.44
408 409 2.091541 ACAATGATAAGCCACCCGTTG 58.908 47.619 0.00 0.00 0.00 4.10
416 417 4.655921 CCACCCGTTGGCATATGT 57.344 55.556 4.29 0.00 39.07 2.29
417 418 2.404083 CCACCCGTTGGCATATGTC 58.596 57.895 0.00 0.00 39.07 3.06
418 419 1.436195 CCACCCGTTGGCATATGTCG 61.436 60.000 2.28 4.18 39.07 4.35
419 420 1.817941 ACCCGTTGGCATATGTCGC 60.818 57.895 2.28 0.00 33.59 5.19
420 421 1.817520 CCCGTTGGCATATGTCGCA 60.818 57.895 2.28 0.00 0.00 5.10
421 422 1.351707 CCGTTGGCATATGTCGCAC 59.648 57.895 2.28 1.18 0.00 5.34
422 423 1.351707 CGTTGGCATATGTCGCACC 59.648 57.895 2.28 0.00 0.00 5.01
423 424 1.089481 CGTTGGCATATGTCGCACCT 61.089 55.000 2.28 0.00 0.00 4.00
424 425 1.804746 CGTTGGCATATGTCGCACCTA 60.805 52.381 2.28 0.00 0.00 3.08
425 426 1.597663 GTTGGCATATGTCGCACCTAC 59.402 52.381 2.28 0.00 0.00 3.18
426 427 0.105964 TGGCATATGTCGCACCTACC 59.894 55.000 2.28 0.00 0.00 3.18
427 428 0.105964 GGCATATGTCGCACCTACCA 59.894 55.000 4.29 0.00 0.00 3.25
428 429 1.474320 GGCATATGTCGCACCTACCAA 60.474 52.381 4.29 0.00 0.00 3.67
429 430 1.597663 GCATATGTCGCACCTACCAAC 59.402 52.381 4.29 0.00 0.00 3.77
430 431 2.210116 CATATGTCGCACCTACCAACC 58.790 52.381 0.00 0.00 0.00 3.77
431 432 0.173935 TATGTCGCACCTACCAACCG 59.826 55.000 0.00 0.00 0.00 4.44
432 433 1.537814 ATGTCGCACCTACCAACCGA 61.538 55.000 0.00 0.00 0.00 4.69
433 434 1.735559 GTCGCACCTACCAACCGAC 60.736 63.158 0.00 0.00 40.92 4.79
434 435 2.201708 TCGCACCTACCAACCGACA 61.202 57.895 0.00 0.00 0.00 4.35
435 436 2.025418 CGCACCTACCAACCGACAC 61.025 63.158 0.00 0.00 0.00 3.67
436 437 1.670083 GCACCTACCAACCGACACC 60.670 63.158 0.00 0.00 0.00 4.16
437 438 1.004200 CACCTACCAACCGACACCC 60.004 63.158 0.00 0.00 0.00 4.61
438 439 2.219164 ACCTACCAACCGACACCCC 61.219 63.158 0.00 0.00 0.00 4.95
439 440 2.666812 CTACCAACCGACACCCCC 59.333 66.667 0.00 0.00 0.00 5.40
455 456 1.645710 CCCCCTGTTCTACTGTCAGT 58.354 55.000 10.99 10.99 0.00 3.41
456 457 1.550976 CCCCCTGTTCTACTGTCAGTC 59.449 57.143 9.26 0.00 0.00 3.51
457 458 2.530701 CCCCTGTTCTACTGTCAGTCT 58.469 52.381 9.26 0.00 0.00 3.24
458 459 2.900546 CCCCTGTTCTACTGTCAGTCTT 59.099 50.000 9.26 0.00 0.00 3.01
459 460 4.087182 CCCCTGTTCTACTGTCAGTCTTA 58.913 47.826 9.26 0.00 0.00 2.10
460 461 4.158764 CCCCTGTTCTACTGTCAGTCTTAG 59.841 50.000 9.26 1.56 0.00 2.18
461 462 4.767928 CCCTGTTCTACTGTCAGTCTTAGT 59.232 45.833 9.26 0.00 0.00 2.24
462 463 5.944599 CCCTGTTCTACTGTCAGTCTTAGTA 59.055 44.000 9.26 0.00 0.00 1.82
463 464 6.127952 CCCTGTTCTACTGTCAGTCTTAGTAC 60.128 46.154 9.26 6.43 0.00 2.73
464 465 6.127952 CCTGTTCTACTGTCAGTCTTAGTACC 60.128 46.154 9.26 0.00 0.00 3.34
465 466 6.301486 TGTTCTACTGTCAGTCTTAGTACCA 58.699 40.000 9.26 0.00 0.00 3.25
466 467 6.206243 TGTTCTACTGTCAGTCTTAGTACCAC 59.794 42.308 9.26 0.15 0.00 4.16
467 468 4.934001 TCTACTGTCAGTCTTAGTACCACG 59.066 45.833 9.26 0.00 0.00 4.94
468 469 3.748083 ACTGTCAGTCTTAGTACCACGA 58.252 45.455 0.00 0.00 0.00 4.35
469 470 3.501445 ACTGTCAGTCTTAGTACCACGAC 59.499 47.826 0.00 0.00 0.00 4.34
470 471 3.479489 TGTCAGTCTTAGTACCACGACA 58.521 45.455 1.13 0.00 0.00 4.35
483 484 0.884259 CACGACAGATGCCAACCACA 60.884 55.000 0.00 0.00 0.00 4.17
486 487 0.877071 GACAGATGCCAACCACACTG 59.123 55.000 0.00 0.00 37.28 3.66
505 506 1.202891 TGTGAGAGAAGGGACGAGACA 60.203 52.381 0.00 0.00 0.00 3.41
526 527 9.928236 GAGACAAACAGAAAATATCTTCTATGC 57.072 33.333 0.00 0.00 35.73 3.14
529 530 9.193806 ACAAACAGAAAATATCTTCTATGCCAT 57.806 29.630 0.00 0.00 35.73 4.40
555 556 6.698008 AAAAACATGAGGCGATAATCATCA 57.302 33.333 0.00 0.00 33.91 3.07
693 699 6.824305 ATAGCAGCACTAATTGTTTGACTT 57.176 33.333 0.00 0.00 33.57 3.01
694 700 5.520376 AGCAGCACTAATTGTTTGACTTT 57.480 34.783 0.00 0.00 0.00 2.66
695 701 5.906073 AGCAGCACTAATTGTTTGACTTTT 58.094 33.333 0.00 0.00 0.00 2.27
696 702 6.340522 AGCAGCACTAATTGTTTGACTTTTT 58.659 32.000 0.00 0.00 0.00 1.94
743 749 8.537728 AATGGAATACATTCTTTGCATCCTAA 57.462 30.769 2.19 0.00 46.67 2.69
744 750 7.572523 TGGAATACATTCTTTGCATCCTAAG 57.427 36.000 2.19 0.00 37.00 2.18
815 822 2.601367 GCCTTCAAGCCCAGCCAA 60.601 61.111 0.00 0.00 0.00 4.52
816 823 2.935740 GCCTTCAAGCCCAGCCAAC 61.936 63.158 0.00 0.00 0.00 3.77
817 824 2.629656 CCTTCAAGCCCAGCCAACG 61.630 63.158 0.00 0.00 0.00 4.10
818 825 1.898574 CTTCAAGCCCAGCCAACGT 60.899 57.895 0.00 0.00 0.00 3.99
819 826 2.133742 CTTCAAGCCCAGCCAACGTG 62.134 60.000 0.00 0.00 0.00 4.49
820 827 4.347453 CAAGCCCAGCCAACGTGC 62.347 66.667 0.00 0.00 0.00 5.34
821 828 4.892965 AAGCCCAGCCAACGTGCA 62.893 61.111 0.36 0.00 0.00 4.57
822 829 4.892965 AGCCCAGCCAACGTGCAA 62.893 61.111 0.36 0.00 0.00 4.08
923 939 1.493311 GCCGCAAACTCTGTCTTCG 59.507 57.895 0.00 0.00 0.00 3.79
991 1007 1.596477 GCCCCATCAGCTCATCGAC 60.596 63.158 0.00 0.00 0.00 4.20
1007 1023 1.002011 GACCCCAACCCTGAAGCTC 60.002 63.158 0.00 0.00 0.00 4.09
1031 1047 1.002251 GTGACAGATCTCCGATCGACC 60.002 57.143 18.66 0.40 0.00 4.79
1294 1313 0.735287 GCCGACTACGTTTCCCTCAC 60.735 60.000 0.00 0.00 37.88 3.51
1348 1397 1.003355 AGGTCGTGGATGCCAAGTG 60.003 57.895 0.00 0.00 34.18 3.16
1431 1483 4.448976 GCAGCTTCCCCTTCCCCC 62.449 72.222 0.00 0.00 0.00 5.40
1580 2274 1.748122 GGTGCTCCTGCCTGACATG 60.748 63.158 0.00 0.00 38.71 3.21
1795 2490 2.091994 AGCAAGCATATTCAGAGCCCTT 60.092 45.455 0.00 0.00 0.00 3.95
1895 2599 3.244911 GGAACATGGACAAGGAGAGGAAA 60.245 47.826 0.00 0.00 0.00 3.13
1945 2649 2.027653 GGAACAAGGACAAGGAGAGGAG 60.028 54.545 0.00 0.00 0.00 3.69
2122 6767 2.480555 CACTGCCGCGGATTGAAC 59.519 61.111 33.48 10.79 0.00 3.18
2222 6867 2.581216 AATCGCGACCTATCCCTCTA 57.419 50.000 12.93 0.00 0.00 2.43
2248 6893 0.957395 ACGAGCTCATTGCCAAGGTG 60.957 55.000 15.40 0.00 44.23 4.00
2495 7174 2.159824 TGCAAATTGATTTGGCATTGCG 59.840 40.909 15.89 0.00 45.44 4.85
2576 7288 6.398234 TTGTGTTGTATATTGTTGCTTGGT 57.602 33.333 0.00 0.00 0.00 3.67
2583 7295 1.708341 ATTGTTGCTTGGTGCCTTCT 58.292 45.000 0.00 0.00 42.00 2.85
2738 7451 4.032217 GTGACAGCGATAGTGTGAAATCTG 59.968 45.833 0.00 0.00 39.35 2.90
2827 7548 0.804989 GAAGGTCGGTGCTTGGAATG 59.195 55.000 0.00 0.00 0.00 2.67
2850 7571 2.293122 TGCACAGTCAAATGTTGTAGCC 59.707 45.455 0.00 0.00 0.00 3.93
2911 7637 6.974932 TTGAAACACTAGAGATGATTGCTC 57.025 37.500 0.00 0.00 0.00 4.26
2916 7642 5.659463 ACACTAGAGATGATTGCTCTCAAC 58.341 41.667 0.00 0.00 41.58 3.18
2923 7649 1.270785 TGATTGCTCTCAACTTCGGCA 60.271 47.619 0.00 0.00 34.60 5.69
3162 7982 7.414208 CGTGAAGACTCAGTATAACTGCTCTTA 60.414 40.741 14.64 6.32 45.54 2.10
3294 9343 2.034124 CCATGATCCGGCCAAGAAATT 58.966 47.619 2.24 0.00 0.00 1.82
3322 9371 1.580815 ATGCCAAACAAAACCAAGCG 58.419 45.000 0.00 0.00 0.00 4.68
3486 13300 2.273370 ACGCTTCACCATACGTACAG 57.727 50.000 0.00 0.00 36.91 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 3.997064 CTTCTCTGCCGACCGCTGG 62.997 68.421 0.00 0.00 38.78 4.85
12 13 2.507992 CTTCTCTGCCGACCGCTG 60.508 66.667 0.00 0.00 38.78 5.18
13 14 4.443266 GCTTCTCTGCCGACCGCT 62.443 66.667 0.00 0.00 38.78 5.52
21 22 3.491652 GTTCGCCGGCTTCTCTGC 61.492 66.667 26.68 3.55 0.00 4.26
22 23 2.048222 TGTTCGCCGGCTTCTCTG 60.048 61.111 26.68 7.77 0.00 3.35
23 24 2.048127 GTGTTCGCCGGCTTCTCT 60.048 61.111 26.68 0.00 0.00 3.10
24 25 2.357034 TGTGTTCGCCGGCTTCTC 60.357 61.111 26.68 14.89 0.00 2.87
25 26 2.357517 CTGTGTTCGCCGGCTTCT 60.358 61.111 26.68 0.00 0.00 2.85
26 27 2.357034 TCTGTGTTCGCCGGCTTC 60.357 61.111 26.68 14.74 0.00 3.86
27 28 2.665185 GTCTGTGTTCGCCGGCTT 60.665 61.111 26.68 0.00 0.00 4.35
28 29 3.923864 TGTCTGTGTTCGCCGGCT 61.924 61.111 26.68 0.00 0.00 5.52
29 30 3.712881 GTGTCTGTGTTCGCCGGC 61.713 66.667 19.07 19.07 0.00 6.13
30 31 2.029073 AGTGTCTGTGTTCGCCGG 59.971 61.111 0.00 0.00 0.00 6.13
31 32 1.299850 TCAGTGTCTGTGTTCGCCG 60.300 57.895 0.00 0.00 32.61 6.46
32 33 1.548973 CGTCAGTGTCTGTGTTCGCC 61.549 60.000 0.00 0.00 32.61 5.54
33 34 1.548973 CCGTCAGTGTCTGTGTTCGC 61.549 60.000 0.00 0.00 32.61 4.70
34 35 1.548973 GCCGTCAGTGTCTGTGTTCG 61.549 60.000 0.00 0.00 32.61 3.95
35 36 0.249489 AGCCGTCAGTGTCTGTGTTC 60.249 55.000 0.00 0.00 32.61 3.18
36 37 0.530650 CAGCCGTCAGTGTCTGTGTT 60.531 55.000 0.00 0.00 32.61 3.32
37 38 1.068083 CAGCCGTCAGTGTCTGTGT 59.932 57.895 0.00 0.00 32.61 3.72
38 39 1.665916 CCAGCCGTCAGTGTCTGTG 60.666 63.158 0.00 0.00 32.61 3.66
39 40 2.737180 CCAGCCGTCAGTGTCTGT 59.263 61.111 0.00 0.00 32.61 3.41
40 41 2.047844 CCCAGCCGTCAGTGTCTG 60.048 66.667 0.00 0.00 0.00 3.51
41 42 2.203640 TCCCAGCCGTCAGTGTCT 60.204 61.111 0.00 0.00 0.00 3.41
42 43 2.048127 GTCCCAGCCGTCAGTGTC 60.048 66.667 0.00 0.00 0.00 3.67
43 44 3.626924 GGTCCCAGCCGTCAGTGT 61.627 66.667 0.00 0.00 0.00 3.55
44 45 4.394712 GGGTCCCAGCCGTCAGTG 62.395 72.222 1.78 0.00 0.00 3.66
63 64 2.958578 AATGGTAATCCGGCTGGGCG 62.959 60.000 12.87 9.56 36.30 6.13
64 65 1.152756 AATGGTAATCCGGCTGGGC 60.153 57.895 12.87 0.00 36.30 5.36
65 66 0.106719 ACAATGGTAATCCGGCTGGG 60.107 55.000 12.87 0.00 36.30 4.45
66 67 2.631160 TACAATGGTAATCCGGCTGG 57.369 50.000 4.71 4.71 36.30 4.85
67 68 3.074412 GGATACAATGGTAATCCGGCTG 58.926 50.000 0.00 0.00 36.30 4.85
68 69 2.039879 GGGATACAATGGTAATCCGGCT 59.960 50.000 0.00 0.00 39.74 5.52
69 70 2.039879 AGGGATACAATGGTAATCCGGC 59.960 50.000 0.00 0.00 39.74 6.13
70 71 3.559171 CCAGGGATACAATGGTAATCCGG 60.559 52.174 0.00 0.00 39.48 5.14
71 72 3.559171 CCCAGGGATACAATGGTAATCCG 60.559 52.174 0.00 0.00 42.01 4.18
72 73 3.245264 CCCCAGGGATACAATGGTAATCC 60.245 52.174 7.25 3.76 42.01 3.01
73 74 4.034285 CCCCAGGGATACAATGGTAATC 57.966 50.000 7.25 0.00 42.01 1.75
92 93 2.485659 GGGTTATATAGGCCTACCCCC 58.514 57.143 25.20 19.59 42.13 5.40
94 95 2.485659 GGGGGTTATATAGGCCTACCC 58.514 57.143 26.92 26.92 46.25 3.69
123 124 2.731572 AGAGATCAACCCTTTGCATGG 58.268 47.619 0.00 0.00 32.17 3.66
124 125 5.188434 TCTAAGAGATCAACCCTTTGCATG 58.812 41.667 0.00 0.00 32.17 4.06
125 126 5.045286 ACTCTAAGAGATCAACCCTTTGCAT 60.045 40.000 0.00 0.00 33.32 3.96
126 127 4.287067 ACTCTAAGAGATCAACCCTTTGCA 59.713 41.667 0.00 0.00 33.32 4.08
127 128 4.837972 ACTCTAAGAGATCAACCCTTTGC 58.162 43.478 0.00 0.00 33.32 3.68
128 129 7.751768 AAAACTCTAAGAGATCAACCCTTTG 57.248 36.000 0.00 0.00 33.32 2.77
129 130 8.881262 TCTAAAACTCTAAGAGATCAACCCTTT 58.119 33.333 0.00 0.00 33.32 3.11
130 131 8.315482 GTCTAAAACTCTAAGAGATCAACCCTT 58.685 37.037 0.00 0.00 33.32 3.95
131 132 7.455008 TGTCTAAAACTCTAAGAGATCAACCCT 59.545 37.037 0.00 0.00 33.32 4.34
132 133 7.546316 GTGTCTAAAACTCTAAGAGATCAACCC 59.454 40.741 0.00 0.00 33.32 4.11
133 134 7.546316 GGTGTCTAAAACTCTAAGAGATCAACC 59.454 40.741 0.00 0.00 33.32 3.77
134 135 8.088981 TGGTGTCTAAAACTCTAAGAGATCAAC 58.911 37.037 0.00 0.00 33.32 3.18
135 136 8.088981 GTGGTGTCTAAAACTCTAAGAGATCAA 58.911 37.037 0.00 0.00 33.32 2.57
136 137 7.575155 CGTGGTGTCTAAAACTCTAAGAGATCA 60.575 40.741 0.00 0.00 33.32 2.92
137 138 6.748198 CGTGGTGTCTAAAACTCTAAGAGATC 59.252 42.308 0.00 0.00 33.32 2.75
138 139 6.208994 ACGTGGTGTCTAAAACTCTAAGAGAT 59.791 38.462 0.00 0.00 33.32 2.75
139 140 5.533903 ACGTGGTGTCTAAAACTCTAAGAGA 59.466 40.000 0.00 0.00 33.32 3.10
140 141 5.770417 ACGTGGTGTCTAAAACTCTAAGAG 58.230 41.667 0.00 0.00 35.52 2.85
141 142 5.779529 ACGTGGTGTCTAAAACTCTAAGA 57.220 39.130 0.00 0.00 0.00 2.10
142 143 6.906659 TCTACGTGGTGTCTAAAACTCTAAG 58.093 40.000 0.00 0.00 0.00 2.18
143 144 6.712095 TCTCTACGTGGTGTCTAAAACTCTAA 59.288 38.462 0.00 0.00 0.00 2.10
144 145 6.233434 TCTCTACGTGGTGTCTAAAACTCTA 58.767 40.000 0.00 0.00 0.00 2.43
145 146 5.068636 TCTCTACGTGGTGTCTAAAACTCT 58.931 41.667 0.00 0.00 0.00 3.24
146 147 5.180868 TCTCTCTACGTGGTGTCTAAAACTC 59.819 44.000 0.00 0.00 0.00 3.01
147 148 5.068636 TCTCTCTACGTGGTGTCTAAAACT 58.931 41.667 0.00 0.00 0.00 2.66
148 149 5.368256 TCTCTCTACGTGGTGTCTAAAAC 57.632 43.478 0.00 0.00 0.00 2.43
149 150 6.395426 TTTCTCTCTACGTGGTGTCTAAAA 57.605 37.500 0.00 0.00 0.00 1.52
150 151 6.395426 TTTTCTCTCTACGTGGTGTCTAAA 57.605 37.500 0.00 0.00 0.00 1.85
151 152 5.048224 CCTTTTCTCTCTACGTGGTGTCTAA 60.048 44.000 0.00 0.00 0.00 2.10
152 153 4.458295 CCTTTTCTCTCTACGTGGTGTCTA 59.542 45.833 0.00 0.00 0.00 2.59
153 154 3.256136 CCTTTTCTCTCTACGTGGTGTCT 59.744 47.826 0.00 0.00 0.00 3.41
154 155 3.255149 TCCTTTTCTCTCTACGTGGTGTC 59.745 47.826 0.00 0.00 0.00 3.67
155 156 3.228453 TCCTTTTCTCTCTACGTGGTGT 58.772 45.455 0.00 0.00 0.00 4.16
156 157 3.506455 TCTCCTTTTCTCTCTACGTGGTG 59.494 47.826 0.00 0.00 0.00 4.17
157 158 3.759618 CTCTCCTTTTCTCTCTACGTGGT 59.240 47.826 0.00 0.00 0.00 4.16
158 159 3.428316 GCTCTCCTTTTCTCTCTACGTGG 60.428 52.174 0.00 0.00 0.00 4.94
159 160 3.442273 AGCTCTCCTTTTCTCTCTACGTG 59.558 47.826 0.00 0.00 0.00 4.49
160 161 3.692690 AGCTCTCCTTTTCTCTCTACGT 58.307 45.455 0.00 0.00 0.00 3.57
161 162 4.261031 GCTAGCTCTCCTTTTCTCTCTACG 60.261 50.000 7.70 0.00 0.00 3.51
162 163 4.037565 GGCTAGCTCTCCTTTTCTCTCTAC 59.962 50.000 15.72 0.00 0.00 2.59
163 164 4.079443 AGGCTAGCTCTCCTTTTCTCTCTA 60.079 45.833 15.72 0.00 0.00 2.43
164 165 3.031013 GGCTAGCTCTCCTTTTCTCTCT 58.969 50.000 15.72 0.00 0.00 3.10
165 166 3.031013 AGGCTAGCTCTCCTTTTCTCTC 58.969 50.000 15.72 0.00 0.00 3.20
166 167 3.114643 AGGCTAGCTCTCCTTTTCTCT 57.885 47.619 15.72 0.00 0.00 3.10
167 168 3.530535 CAAGGCTAGCTCTCCTTTTCTC 58.469 50.000 15.72 0.00 40.50 2.87
168 169 2.355615 GCAAGGCTAGCTCTCCTTTTCT 60.356 50.000 15.72 0.00 40.50 2.52
169 170 2.013400 GCAAGGCTAGCTCTCCTTTTC 58.987 52.381 15.72 7.93 40.50 2.29
170 171 1.340502 GGCAAGGCTAGCTCTCCTTTT 60.341 52.381 15.72 0.00 40.50 2.27
171 172 0.254462 GGCAAGGCTAGCTCTCCTTT 59.746 55.000 15.72 0.00 40.50 3.11
172 173 1.631071 GGGCAAGGCTAGCTCTCCTT 61.631 60.000 15.72 12.28 43.06 3.36
173 174 2.069430 GGGCAAGGCTAGCTCTCCT 61.069 63.158 15.72 0.00 0.00 3.69
174 175 1.631071 AAGGGCAAGGCTAGCTCTCC 61.631 60.000 15.72 10.54 43.32 3.71
175 176 0.179059 GAAGGGCAAGGCTAGCTCTC 60.179 60.000 15.72 0.00 43.32 3.20
176 177 0.620121 AGAAGGGCAAGGCTAGCTCT 60.620 55.000 15.72 7.30 46.87 4.09
177 178 0.254462 AAGAAGGGCAAGGCTAGCTC 59.746 55.000 15.72 4.82 0.00 4.09
178 179 0.254462 GAAGAAGGGCAAGGCTAGCT 59.746 55.000 15.72 0.00 0.00 3.32
179 180 0.254462 AGAAGAAGGGCAAGGCTAGC 59.746 55.000 6.04 6.04 0.00 3.42
180 181 2.637947 GAAGAAGAAGGGCAAGGCTAG 58.362 52.381 0.00 0.00 0.00 3.42
181 182 1.282157 GGAAGAAGAAGGGCAAGGCTA 59.718 52.381 0.00 0.00 0.00 3.93
182 183 0.038890 GGAAGAAGAAGGGCAAGGCT 59.961 55.000 0.00 0.00 0.00 4.58
183 184 0.038890 AGGAAGAAGAAGGGCAAGGC 59.961 55.000 0.00 0.00 0.00 4.35
184 185 1.632920 AGAGGAAGAAGAAGGGCAAGG 59.367 52.381 0.00 0.00 0.00 3.61
185 186 4.444164 GGATAGAGGAAGAAGAAGGGCAAG 60.444 50.000 0.00 0.00 0.00 4.01
186 187 3.456277 GGATAGAGGAAGAAGAAGGGCAA 59.544 47.826 0.00 0.00 0.00 4.52
187 188 3.041946 GGATAGAGGAAGAAGAAGGGCA 58.958 50.000 0.00 0.00 0.00 5.36
188 189 3.041946 TGGATAGAGGAAGAAGAAGGGC 58.958 50.000 0.00 0.00 0.00 5.19
189 190 5.045578 TGTTTGGATAGAGGAAGAAGAAGGG 60.046 44.000 0.00 0.00 0.00 3.95
190 191 6.054860 TGTTTGGATAGAGGAAGAAGAAGG 57.945 41.667 0.00 0.00 0.00 3.46
191 192 5.584251 GCTGTTTGGATAGAGGAAGAAGAAG 59.416 44.000 0.00 0.00 0.00 2.85
192 193 5.249393 AGCTGTTTGGATAGAGGAAGAAGAA 59.751 40.000 0.00 0.00 0.00 2.52
193 194 4.780021 AGCTGTTTGGATAGAGGAAGAAGA 59.220 41.667 0.00 0.00 0.00 2.87
194 195 5.096443 AGCTGTTTGGATAGAGGAAGAAG 57.904 43.478 0.00 0.00 0.00 2.85
195 196 4.532126 TGAGCTGTTTGGATAGAGGAAGAA 59.468 41.667 0.00 0.00 0.00 2.52
196 197 4.096681 TGAGCTGTTTGGATAGAGGAAGA 58.903 43.478 0.00 0.00 0.00 2.87
197 198 4.478206 TGAGCTGTTTGGATAGAGGAAG 57.522 45.455 0.00 0.00 0.00 3.46
198 199 4.323792 CCTTGAGCTGTTTGGATAGAGGAA 60.324 45.833 0.00 0.00 0.00 3.36
199 200 3.198635 CCTTGAGCTGTTTGGATAGAGGA 59.801 47.826 0.00 0.00 0.00 3.71
200 201 3.198635 TCCTTGAGCTGTTTGGATAGAGG 59.801 47.826 0.00 0.00 0.00 3.69
201 202 4.440880 CTCCTTGAGCTGTTTGGATAGAG 58.559 47.826 0.00 0.00 0.00 2.43
202 203 4.478206 CTCCTTGAGCTGTTTGGATAGA 57.522 45.455 0.00 0.00 0.00 1.98
215 216 1.830477 AGCTACAAGAGGCTCCTTGAG 59.170 52.381 24.04 18.57 44.66 3.02
216 217 1.944177 AGCTACAAGAGGCTCCTTGA 58.056 50.000 24.04 12.44 44.66 3.02
217 218 2.763448 AGTAGCTACAAGAGGCTCCTTG 59.237 50.000 25.28 16.28 46.61 3.61
218 219 3.108847 AGTAGCTACAAGAGGCTCCTT 57.891 47.619 25.28 2.04 39.65 3.36
219 220 2.763448 CAAGTAGCTACAAGAGGCTCCT 59.237 50.000 25.28 2.25 39.65 3.69
220 221 2.498078 ACAAGTAGCTACAAGAGGCTCC 59.502 50.000 25.28 0.00 39.65 4.70
221 222 3.878160 ACAAGTAGCTACAAGAGGCTC 57.122 47.619 25.28 6.34 39.65 4.70
222 223 5.422331 TCAATACAAGTAGCTACAAGAGGCT 59.578 40.000 25.28 0.00 41.92 4.58
223 224 5.661458 TCAATACAAGTAGCTACAAGAGGC 58.339 41.667 25.28 0.00 0.00 4.70
224 225 7.721402 AGATCAATACAAGTAGCTACAAGAGG 58.279 38.462 25.28 11.69 0.00 3.69
225 226 9.891828 CTAGATCAATACAAGTAGCTACAAGAG 57.108 37.037 25.28 13.63 0.00 2.85
226 227 9.409918 ACTAGATCAATACAAGTAGCTACAAGA 57.590 33.333 25.28 11.76 0.00 3.02
227 228 9.457110 CACTAGATCAATACAAGTAGCTACAAG 57.543 37.037 25.28 18.29 0.00 3.16
228 229 9.185680 TCACTAGATCAATACAAGTAGCTACAA 57.814 33.333 25.28 8.48 0.00 2.41
229 230 8.747538 TCACTAGATCAATACAAGTAGCTACA 57.252 34.615 25.28 5.35 0.00 2.74
246 247 2.560542 GGTCTCCGCATGATCACTAGAT 59.439 50.000 0.00 0.00 37.13 1.98
247 248 1.957177 GGTCTCCGCATGATCACTAGA 59.043 52.381 0.00 0.00 0.00 2.43
248 249 1.000283 GGGTCTCCGCATGATCACTAG 60.000 57.143 0.00 0.00 0.00 2.57
249 250 1.040646 GGGTCTCCGCATGATCACTA 58.959 55.000 0.00 0.00 0.00 2.74
250 251 1.826024 GGGTCTCCGCATGATCACT 59.174 57.895 0.00 0.00 0.00 3.41
251 252 4.445699 GGGTCTCCGCATGATCAC 57.554 61.111 0.00 0.00 0.00 3.06
267 268 1.070445 CCCTAATCCTGCTCTGCGG 59.930 63.158 0.00 0.00 34.23 5.69
268 269 1.070445 CCCCTAATCCTGCTCTGCG 59.930 63.158 0.00 0.00 0.00 5.18
269 270 0.179034 CACCCCTAATCCTGCTCTGC 60.179 60.000 0.00 0.00 0.00 4.26
270 271 1.207791 ACACCCCTAATCCTGCTCTG 58.792 55.000 0.00 0.00 0.00 3.35
271 272 1.972588 AACACCCCTAATCCTGCTCT 58.027 50.000 0.00 0.00 0.00 4.09
272 273 3.648545 AGATAACACCCCTAATCCTGCTC 59.351 47.826 0.00 0.00 0.00 4.26
273 274 3.669949 AGATAACACCCCTAATCCTGCT 58.330 45.455 0.00 0.00 0.00 4.24
274 275 4.141482 TGAAGATAACACCCCTAATCCTGC 60.141 45.833 0.00 0.00 0.00 4.85
275 276 5.630415 TGAAGATAACACCCCTAATCCTG 57.370 43.478 0.00 0.00 0.00 3.86
276 277 5.073691 CCATGAAGATAACACCCCTAATCCT 59.926 44.000 0.00 0.00 0.00 3.24
277 278 5.073144 TCCATGAAGATAACACCCCTAATCC 59.927 44.000 0.00 0.00 0.00 3.01
278 279 6.043243 TCTCCATGAAGATAACACCCCTAATC 59.957 42.308 0.00 0.00 0.00 1.75
279 280 5.911178 TCTCCATGAAGATAACACCCCTAAT 59.089 40.000 0.00 0.00 0.00 1.73
280 281 5.285401 TCTCCATGAAGATAACACCCCTAA 58.715 41.667 0.00 0.00 0.00 2.69
281 282 4.890988 TCTCCATGAAGATAACACCCCTA 58.109 43.478 0.00 0.00 0.00 3.53
282 283 3.713764 CTCTCCATGAAGATAACACCCCT 59.286 47.826 0.00 0.00 0.00 4.79
283 284 3.745797 GCTCTCCATGAAGATAACACCCC 60.746 52.174 0.00 0.00 0.00 4.95
284 285 3.471680 GCTCTCCATGAAGATAACACCC 58.528 50.000 0.00 0.00 0.00 4.61
285 286 3.471680 GGCTCTCCATGAAGATAACACC 58.528 50.000 0.00 0.00 0.00 4.16
286 287 3.471680 GGGCTCTCCATGAAGATAACAC 58.528 50.000 0.00 0.00 35.00 3.32
287 288 2.439507 GGGGCTCTCCATGAAGATAACA 59.560 50.000 0.00 0.00 37.22 2.41
288 289 2.548920 CGGGGCTCTCCATGAAGATAAC 60.549 54.545 0.00 0.00 37.22 1.89
289 290 1.694150 CGGGGCTCTCCATGAAGATAA 59.306 52.381 0.00 0.00 37.22 1.75
290 291 1.133167 TCGGGGCTCTCCATGAAGATA 60.133 52.381 0.00 0.00 37.22 1.98
291 292 0.399091 TCGGGGCTCTCCATGAAGAT 60.399 55.000 0.00 0.00 37.22 2.40
292 293 0.617535 TTCGGGGCTCTCCATGAAGA 60.618 55.000 0.00 0.00 37.22 2.87
293 294 0.462759 GTTCGGGGCTCTCCATGAAG 60.463 60.000 0.00 0.00 37.22 3.02
294 295 1.602237 GTTCGGGGCTCTCCATGAA 59.398 57.895 0.00 0.00 37.22 2.57
295 296 2.367202 GGTTCGGGGCTCTCCATGA 61.367 63.158 0.00 0.00 37.22 3.07
296 297 2.190578 GGTTCGGGGCTCTCCATG 59.809 66.667 0.00 0.00 37.22 3.66
297 298 2.041265 AGGTTCGGGGCTCTCCAT 59.959 61.111 0.00 0.00 37.22 3.41
298 299 3.003173 CAGGTTCGGGGCTCTCCA 61.003 66.667 0.00 0.00 37.22 3.86
299 300 3.787001 CCAGGTTCGGGGCTCTCC 61.787 72.222 0.00 0.00 0.00 3.71
300 301 3.787001 CCCAGGTTCGGGGCTCTC 61.787 72.222 0.00 0.00 43.21 3.20
309 310 1.664873 GGCGAATCTTACCCAGGTTC 58.335 55.000 0.00 0.00 39.08 3.62
310 311 0.107848 CGGCGAATCTTACCCAGGTT 60.108 55.000 0.00 0.00 0.00 3.50
311 312 0.974010 TCGGCGAATCTTACCCAGGT 60.974 55.000 7.35 0.00 0.00 4.00
312 313 0.529992 GTCGGCGAATCTTACCCAGG 60.530 60.000 12.92 0.00 0.00 4.45
313 314 0.870307 CGTCGGCGAATCTTACCCAG 60.870 60.000 12.92 0.00 41.33 4.45
314 315 1.140161 CGTCGGCGAATCTTACCCA 59.860 57.895 12.92 0.00 41.33 4.51
315 316 1.140375 ACGTCGGCGAATCTTACCC 59.860 57.895 20.03 0.00 42.00 3.69
316 317 1.749609 GCACGTCGGCGAATCTTACC 61.750 60.000 20.03 0.00 42.00 2.85
317 318 1.074319 TGCACGTCGGCGAATCTTAC 61.074 55.000 20.03 0.00 42.00 2.34
318 319 0.179121 ATGCACGTCGGCGAATCTTA 60.179 50.000 20.03 0.00 42.00 2.10
319 320 1.447838 ATGCACGTCGGCGAATCTT 60.448 52.632 20.03 0.00 42.00 2.40
320 321 2.167219 CATGCACGTCGGCGAATCT 61.167 57.895 20.03 0.00 42.00 2.40
321 322 2.321060 CATGCACGTCGGCGAATC 59.679 61.111 20.03 4.74 42.00 2.52
322 323 2.434185 ACATGCACGTCGGCGAAT 60.434 55.556 20.03 3.43 42.00 3.34
323 324 3.109547 GACATGCACGTCGGCGAA 61.110 61.111 20.03 0.48 42.00 4.70
324 325 3.567478 AAGACATGCACGTCGGCGA 62.567 57.895 20.03 4.99 40.98 5.54
325 326 3.071459 GAAGACATGCACGTCGGCG 62.071 63.158 8.42 8.42 40.98 6.46
326 327 2.778679 GAAGACATGCACGTCGGC 59.221 61.111 7.35 0.00 40.98 5.54
327 328 3.071459 GCGAAGACATGCACGTCGG 62.071 63.158 21.86 2.43 40.98 4.79
328 329 2.391821 GCGAAGACATGCACGTCG 59.608 61.111 18.50 18.50 40.98 5.12
329 330 1.291877 AAGGCGAAGACATGCACGTC 61.292 55.000 4.38 4.38 39.87 4.34
330 331 0.037697 TAAGGCGAAGACATGCACGT 60.038 50.000 0.00 0.00 39.87 4.49
331 332 1.258982 GATAAGGCGAAGACATGCACG 59.741 52.381 0.00 0.00 39.87 5.34
332 333 1.599542 GGATAAGGCGAAGACATGCAC 59.400 52.381 0.00 0.00 39.87 4.57
333 334 1.475034 GGGATAAGGCGAAGACATGCA 60.475 52.381 0.00 0.00 39.87 3.96
334 335 1.230324 GGGATAAGGCGAAGACATGC 58.770 55.000 0.00 0.00 39.87 4.06
335 336 1.202533 ACGGGATAAGGCGAAGACATG 60.203 52.381 0.00 0.00 39.87 3.21
336 337 1.120530 ACGGGATAAGGCGAAGACAT 58.879 50.000 0.00 0.00 39.87 3.06
337 338 0.899720 AACGGGATAAGGCGAAGACA 59.100 50.000 0.00 0.00 39.87 3.41
338 339 1.931841 GAAACGGGATAAGGCGAAGAC 59.068 52.381 0.00 0.00 0.00 3.01
339 340 1.134610 GGAAACGGGATAAGGCGAAGA 60.135 52.381 0.00 0.00 0.00 2.87
340 341 1.296727 GGAAACGGGATAAGGCGAAG 58.703 55.000 0.00 0.00 0.00 3.79
341 342 0.614294 TGGAAACGGGATAAGGCGAA 59.386 50.000 0.00 0.00 0.00 4.70
342 343 0.177141 CTGGAAACGGGATAAGGCGA 59.823 55.000 0.00 0.00 0.00 5.54
343 344 2.690326 CTGGAAACGGGATAAGGCG 58.310 57.895 0.00 0.00 0.00 5.52
355 356 4.028490 ATCGCCGGTGCCTGGAAA 62.028 61.111 11.05 0.00 0.00 3.13
356 357 4.776322 CATCGCCGGTGCCTGGAA 62.776 66.667 11.05 0.00 0.00 3.53
359 360 2.572095 TAAGACATCGCCGGTGCCTG 62.572 60.000 11.05 12.74 0.00 4.85
360 361 2.355986 TAAGACATCGCCGGTGCCT 61.356 57.895 11.05 1.60 0.00 4.75
361 362 2.171725 GTAAGACATCGCCGGTGCC 61.172 63.158 11.05 0.00 0.00 5.01
362 363 1.153628 AGTAAGACATCGCCGGTGC 60.154 57.895 11.05 0.00 0.00 5.01
363 364 0.806102 CCAGTAAGACATCGCCGGTG 60.806 60.000 9.28 9.28 0.00 4.94
364 365 1.515954 CCAGTAAGACATCGCCGGT 59.484 57.895 1.90 0.00 0.00 5.28
365 366 1.883084 GCCAGTAAGACATCGCCGG 60.883 63.158 0.00 0.00 0.00 6.13
366 367 0.872021 GAGCCAGTAAGACATCGCCG 60.872 60.000 0.00 0.00 0.00 6.46
367 368 0.530870 GGAGCCAGTAAGACATCGCC 60.531 60.000 0.00 0.00 0.00 5.54
368 369 0.530870 GGGAGCCAGTAAGACATCGC 60.531 60.000 0.00 0.00 0.00 4.58
369 370 0.824109 TGGGAGCCAGTAAGACATCG 59.176 55.000 0.00 0.00 0.00 3.84
370 371 1.555075 TGTGGGAGCCAGTAAGACATC 59.445 52.381 0.00 0.00 32.34 3.06
371 372 1.656587 TGTGGGAGCCAGTAAGACAT 58.343 50.000 0.00 0.00 32.34 3.06
372 373 1.429930 TTGTGGGAGCCAGTAAGACA 58.570 50.000 0.00 0.00 32.34 3.41
373 374 2.027192 TCATTGTGGGAGCCAGTAAGAC 60.027 50.000 0.00 0.00 32.34 3.01
374 375 2.265367 TCATTGTGGGAGCCAGTAAGA 58.735 47.619 0.00 0.00 32.34 2.10
375 376 2.787473 TCATTGTGGGAGCCAGTAAG 57.213 50.000 0.00 0.00 32.34 2.34
376 377 4.780815 CTTATCATTGTGGGAGCCAGTAA 58.219 43.478 0.00 0.00 32.34 2.24
377 378 3.433598 GCTTATCATTGTGGGAGCCAGTA 60.434 47.826 0.00 0.00 32.34 2.74
378 379 2.684927 GCTTATCATTGTGGGAGCCAGT 60.685 50.000 0.00 0.00 32.34 4.00
379 380 1.952296 GCTTATCATTGTGGGAGCCAG 59.048 52.381 0.00 0.00 32.34 4.85
380 381 1.410083 GGCTTATCATTGTGGGAGCCA 60.410 52.381 7.27 0.00 46.76 4.75
381 382 1.322442 GGCTTATCATTGTGGGAGCC 58.678 55.000 0.00 0.00 42.35 4.70
382 383 1.678101 GTGGCTTATCATTGTGGGAGC 59.322 52.381 0.00 0.00 0.00 4.70
383 384 2.301346 GGTGGCTTATCATTGTGGGAG 58.699 52.381 0.00 0.00 0.00 4.30
384 385 1.064017 GGGTGGCTTATCATTGTGGGA 60.064 52.381 0.00 0.00 0.00 4.37
385 386 1.402787 GGGTGGCTTATCATTGTGGG 58.597 55.000 0.00 0.00 0.00 4.61
386 387 1.024271 CGGGTGGCTTATCATTGTGG 58.976 55.000 0.00 0.00 0.00 4.17
387 388 1.750193 ACGGGTGGCTTATCATTGTG 58.250 50.000 0.00 0.00 0.00 3.33
388 389 2.091541 CAACGGGTGGCTTATCATTGT 58.908 47.619 0.00 0.00 0.00 2.71
389 390 1.405105 CCAACGGGTGGCTTATCATTG 59.595 52.381 0.00 0.00 41.72 2.82
390 391 1.762708 CCAACGGGTGGCTTATCATT 58.237 50.000 0.00 0.00 41.72 2.57
391 392 3.494850 CCAACGGGTGGCTTATCAT 57.505 52.632 0.00 0.00 41.72 2.45
400 401 2.013807 CGACATATGCCAACGGGTG 58.986 57.895 1.58 0.00 36.17 4.61
401 402 1.817941 GCGACATATGCCAACGGGT 60.818 57.895 1.58 0.00 36.17 5.28
402 403 1.817520 TGCGACATATGCCAACGGG 60.818 57.895 1.58 0.00 37.18 5.28
403 404 1.351707 GTGCGACATATGCCAACGG 59.648 57.895 1.58 0.00 0.00 4.44
404 405 1.089481 AGGTGCGACATATGCCAACG 61.089 55.000 1.58 5.35 0.00 4.10
405 406 1.597663 GTAGGTGCGACATATGCCAAC 59.402 52.381 1.58 0.56 0.00 3.77
406 407 1.474320 GGTAGGTGCGACATATGCCAA 60.474 52.381 1.58 0.00 0.00 4.52
407 408 0.105964 GGTAGGTGCGACATATGCCA 59.894 55.000 1.58 0.00 0.00 4.92
408 409 0.105964 TGGTAGGTGCGACATATGCC 59.894 55.000 1.58 0.00 0.00 4.40
409 410 1.597663 GTTGGTAGGTGCGACATATGC 59.402 52.381 1.58 0.00 0.00 3.14
410 411 2.210116 GGTTGGTAGGTGCGACATATG 58.790 52.381 0.00 0.00 0.00 1.78
411 412 1.202486 CGGTTGGTAGGTGCGACATAT 60.202 52.381 0.00 0.00 0.00 1.78
412 413 0.173935 CGGTTGGTAGGTGCGACATA 59.826 55.000 0.00 0.00 0.00 2.29
413 414 1.079405 CGGTTGGTAGGTGCGACAT 60.079 57.895 0.00 0.00 0.00 3.06
414 415 2.201708 TCGGTTGGTAGGTGCGACA 61.202 57.895 0.00 0.00 0.00 4.35
415 416 1.735559 GTCGGTTGGTAGGTGCGAC 60.736 63.158 0.00 0.00 0.00 5.19
416 417 2.201708 TGTCGGTTGGTAGGTGCGA 61.202 57.895 0.00 0.00 0.00 5.10
417 418 2.025418 GTGTCGGTTGGTAGGTGCG 61.025 63.158 0.00 0.00 0.00 5.34
418 419 1.670083 GGTGTCGGTTGGTAGGTGC 60.670 63.158 0.00 0.00 0.00 5.01
419 420 1.004200 GGGTGTCGGTTGGTAGGTG 60.004 63.158 0.00 0.00 0.00 4.00
420 421 2.219164 GGGGTGTCGGTTGGTAGGT 61.219 63.158 0.00 0.00 0.00 3.08
421 422 2.666812 GGGGTGTCGGTTGGTAGG 59.333 66.667 0.00 0.00 0.00 3.18
422 423 2.666812 GGGGGTGTCGGTTGGTAG 59.333 66.667 0.00 0.00 0.00 3.18
436 437 1.550976 GACTGACAGTAGAACAGGGGG 59.449 57.143 8.41 0.00 36.17 5.40
437 438 2.530701 AGACTGACAGTAGAACAGGGG 58.469 52.381 8.41 0.00 36.17 4.79
438 439 4.767928 ACTAAGACTGACAGTAGAACAGGG 59.232 45.833 8.41 0.00 36.17 4.45
439 440 5.968528 ACTAAGACTGACAGTAGAACAGG 57.031 43.478 8.41 0.00 36.17 4.00
440 441 6.430308 TGGTACTAAGACTGACAGTAGAACAG 59.570 42.308 8.41 4.59 37.62 3.16
441 442 6.206243 GTGGTACTAAGACTGACAGTAGAACA 59.794 42.308 8.41 2.67 0.00 3.18
442 443 6.610456 GTGGTACTAAGACTGACAGTAGAAC 58.390 44.000 8.41 0.00 0.00 3.01
443 444 5.410746 CGTGGTACTAAGACTGACAGTAGAA 59.589 44.000 8.41 0.00 0.00 2.10
444 445 4.934001 CGTGGTACTAAGACTGACAGTAGA 59.066 45.833 8.41 0.00 0.00 2.59
445 446 4.934001 TCGTGGTACTAAGACTGACAGTAG 59.066 45.833 8.41 5.18 0.00 2.57
446 447 4.692625 GTCGTGGTACTAAGACTGACAGTA 59.307 45.833 16.09 0.00 0.00 2.74
447 448 3.501445 GTCGTGGTACTAAGACTGACAGT 59.499 47.826 16.09 8.12 0.00 3.55
448 449 3.501062 TGTCGTGGTACTAAGACTGACAG 59.499 47.826 21.90 0.00 34.92 3.51
449 450 3.479489 TGTCGTGGTACTAAGACTGACA 58.521 45.455 21.90 9.99 34.92 3.58
450 451 3.750130 TCTGTCGTGGTACTAAGACTGAC 59.250 47.826 22.85 9.25 36.91 3.51
451 452 4.011966 TCTGTCGTGGTACTAAGACTGA 57.988 45.455 22.85 22.85 38.58 3.41
452 453 4.663166 CATCTGTCGTGGTACTAAGACTG 58.337 47.826 21.90 20.87 34.92 3.51
453 454 3.128938 GCATCTGTCGTGGTACTAAGACT 59.871 47.826 21.90 3.82 34.92 3.24
454 455 3.436496 GCATCTGTCGTGGTACTAAGAC 58.564 50.000 16.42 16.42 0.00 3.01
455 456 2.426024 GGCATCTGTCGTGGTACTAAGA 59.574 50.000 0.00 0.00 0.00 2.10
456 457 2.165641 TGGCATCTGTCGTGGTACTAAG 59.834 50.000 0.00 0.00 0.00 2.18
457 458 2.172679 TGGCATCTGTCGTGGTACTAA 58.827 47.619 0.00 0.00 0.00 2.24
458 459 1.842052 TGGCATCTGTCGTGGTACTA 58.158 50.000 0.00 0.00 0.00 1.82
459 460 0.973632 TTGGCATCTGTCGTGGTACT 59.026 50.000 0.00 0.00 0.00 2.73
460 461 1.076332 GTTGGCATCTGTCGTGGTAC 58.924 55.000 0.00 0.00 0.00 3.34
461 462 0.036765 GGTTGGCATCTGTCGTGGTA 60.037 55.000 0.00 0.00 0.00 3.25
462 463 1.302511 GGTTGGCATCTGTCGTGGT 60.303 57.895 0.00 0.00 0.00 4.16
463 464 1.302431 TGGTTGGCATCTGTCGTGG 60.302 57.895 0.00 0.00 0.00 4.94
464 465 0.884259 TGTGGTTGGCATCTGTCGTG 60.884 55.000 0.00 0.00 0.00 4.35
465 466 0.884704 GTGTGGTTGGCATCTGTCGT 60.885 55.000 0.00 0.00 0.00 4.34
466 467 0.603707 AGTGTGGTTGGCATCTGTCG 60.604 55.000 0.00 0.00 0.00 4.35
467 468 0.877071 CAGTGTGGTTGGCATCTGTC 59.123 55.000 0.00 0.00 0.00 3.51
468 469 0.183492 ACAGTGTGGTTGGCATCTGT 59.817 50.000 0.00 0.00 0.00 3.41
469 470 0.594602 CACAGTGTGGTTGGCATCTG 59.405 55.000 15.86 0.00 0.00 2.90
470 471 0.473755 TCACAGTGTGGTTGGCATCT 59.526 50.000 22.79 0.00 33.87 2.90
483 484 1.074084 TCTCGTCCCTTCTCTCACAGT 59.926 52.381 0.00 0.00 0.00 3.55
486 487 1.535833 TGTCTCGTCCCTTCTCTCAC 58.464 55.000 0.00 0.00 0.00 3.51
533 534 5.240183 CCTGATGATTATCGCCTCATGTTTT 59.760 40.000 0.00 0.00 36.04 2.43
537 538 3.055602 TCCCTGATGATTATCGCCTCATG 60.056 47.826 0.00 0.00 36.04 3.07
718 724 8.537728 TTAGGATGCAAAGAATGTATTCCATT 57.462 30.769 0.00 0.00 46.51 3.16
719 725 7.781693 ACTTAGGATGCAAAGAATGTATTCCAT 59.218 33.333 2.92 0.00 37.51 3.41
726 732 7.759489 TTTGTACTTAGGATGCAAAGAATGT 57.241 32.000 2.92 0.00 0.00 2.71
817 824 1.435577 CTAGGGTTACCACGTTGCAC 58.564 55.000 2.98 0.00 40.13 4.57
818 825 0.320946 GCTAGGGTTACCACGTTGCA 60.321 55.000 2.98 0.00 40.13 4.08
819 826 0.036671 AGCTAGGGTTACCACGTTGC 60.037 55.000 2.98 0.00 40.13 4.17
820 827 1.734707 CGAGCTAGGGTTACCACGTTG 60.735 57.143 2.98 0.00 40.13 4.10
821 828 0.529378 CGAGCTAGGGTTACCACGTT 59.471 55.000 2.98 0.00 40.13 3.99
822 829 1.941999 GCGAGCTAGGGTTACCACGT 61.942 60.000 2.98 0.00 40.13 4.49
991 1007 2.045926 CGAGCTTCAGGGTTGGGG 60.046 66.667 0.00 0.00 0.00 4.96
1031 1047 2.509336 GACATGACGGACCTGCGG 60.509 66.667 0.00 0.00 0.00 5.69
1340 1389 2.594303 CTGAACCCGCACTTGGCA 60.594 61.111 0.00 0.00 45.17 4.92
1348 1397 1.662446 TCGACGAAACTGAACCCGC 60.662 57.895 0.00 0.00 0.00 6.13
1580 2274 0.248377 GATCGCTGAAATGCTGGTGC 60.248 55.000 0.00 0.00 40.20 5.01
1895 2599 2.295349 CTGGCATTTTGTCTTCTGCAGT 59.705 45.455 14.67 0.00 36.34 4.40
1945 2649 1.291132 GCGTTTCATCCTCTACTGCC 58.709 55.000 0.00 0.00 0.00 4.85
2053 6698 0.387202 CCGAGCTGACACCTATGAGG 59.613 60.000 0.00 0.00 42.49 3.86
2089 6734 3.774528 TGGTGCCGCTCAGCTAGG 61.775 66.667 0.00 0.00 43.32 3.02
2122 6767 1.075542 TAAACTCAATGCACGCCTCG 58.924 50.000 0.00 0.00 0.00 4.63
2222 6867 2.557924 TGGCAATGAGCTCGTTCAAAAT 59.442 40.909 18.41 0.00 44.79 1.82
2292 6955 5.050295 CACATATGCATAGCAGAGTCACTTG 60.050 44.000 12.79 3.52 43.65 3.16
2495 7174 4.430908 AGCTACGAAAGTTATACACTGCC 58.569 43.478 0.00 0.00 46.40 4.85
2574 7286 4.336713 GGTTTTCATGATAGAGAAGGCACC 59.663 45.833 0.00 0.00 0.00 5.01
2576 7288 5.441718 AGGTTTTCATGATAGAGAAGGCA 57.558 39.130 0.00 0.00 0.00 4.75
2583 7295 8.402798 TGCTACAAAAAGGTTTTCATGATAGA 57.597 30.769 0.00 0.00 0.00 1.98
2738 7451 3.261137 AGAAGGTTACTAGGCACTGGAAC 59.739 47.826 0.00 0.00 40.33 3.62
2827 7548 3.730715 GCTACAACATTTGACTGTGCAAC 59.269 43.478 0.00 0.00 37.35 4.17
2833 7554 2.665519 GCACGGCTACAACATTTGACTG 60.666 50.000 0.00 0.00 0.00 3.51
2850 7571 1.241315 CCTTTTGGGTACAGGGCACG 61.241 60.000 0.00 0.00 35.46 5.34
2923 7649 4.825085 TCAAAGCTTACCCATCTTTTCGTT 59.175 37.500 0.00 0.00 0.00 3.85
3162 7982 2.177888 GGGCAGGAAGGGATAAAGGATT 59.822 50.000 0.00 0.00 0.00 3.01
3294 9343 5.128827 TGGTTTTGTTTGGCATAAGTTGGTA 59.871 36.000 0.00 0.00 0.00 3.25
3322 9371 1.634702 GCTGTAGAGTGTAGTGCAGC 58.365 55.000 0.00 0.00 43.67 5.25


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.