Multiple sequence alignment - TraesCS7D01G442300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G442300 chr7D 100.000 4405 0 0 1 4405 561759239 561754835 0.000000e+00 8135.0
1 TraesCS7D01G442300 chr7D 85.520 808 73 27 982 1772 561700090 561700870 0.000000e+00 804.0
2 TraesCS7D01G442300 chr7D 84.105 648 79 17 2897 3527 561704442 561705082 4.870000e-169 604.0
3 TraesCS7D01G442300 chr7D 98.667 150 2 0 431 580 19405919 19406068 2.610000e-67 267.0
4 TraesCS7D01G442300 chr7D 88.235 85 6 3 1816 1897 561701597 561701680 1.010000e-16 99.0
5 TraesCS7D01G442300 chr7A 87.208 1798 114 53 583 2308 646585858 646584105 0.000000e+00 1940.0
6 TraesCS7D01G442300 chr7A 89.032 1167 95 18 2468 3624 646584110 646582967 0.000000e+00 1415.0
7 TraesCS7D01G442300 chr7A 85.302 796 75 25 994 1772 646477504 646478274 0.000000e+00 784.0
8 TraesCS7D01G442300 chr7A 85.156 768 98 10 3633 4393 646582797 646582039 0.000000e+00 773.0
9 TraesCS7D01G442300 chr7A 84.434 636 74 17 2897 3515 646483111 646483738 1.750000e-168 603.0
10 TraesCS7D01G442300 chr7A 83.680 337 36 11 106 434 646586172 646585847 2.580000e-77 300.0
11 TraesCS7D01G442300 chr7A 77.005 187 29 9 1317 1496 617385975 617385796 1.300000e-15 95.3
12 TraesCS7D01G442300 chr7A 84.270 89 10 3 1816 1901 646478992 646479079 2.820000e-12 84.2
13 TraesCS7D01G442300 chr7A 87.302 63 8 0 55 117 646586839 646586777 6.110000e-09 73.1
14 TraesCS7D01G442300 chr7A 87.273 55 7 0 1168 1222 669727981 669728035 3.680000e-06 63.9
15 TraesCS7D01G442300 chr7B 85.608 1890 204 29 2519 4393 610736461 610734625 0.000000e+00 1921.0
16 TraesCS7D01G442300 chr7B 86.678 1794 100 59 583 2308 610738184 610736462 0.000000e+00 1860.0
17 TraesCS7D01G442300 chr7B 84.211 779 99 19 2897 3659 610482435 610483205 0.000000e+00 736.0
18 TraesCS7D01G442300 chr7B 86.538 572 62 12 982 1546 610478541 610479104 2.250000e-172 616.0
19 TraesCS7D01G442300 chr7B 92.661 218 12 2 1554 1771 610479162 610479375 1.190000e-80 311.0
20 TraesCS7D01G442300 chr7B 84.979 233 26 4 203 427 610738409 610738178 1.230000e-55 228.0
21 TraesCS7D01G442300 chr7B 80.556 216 38 4 3792 4006 121778512 121778724 3.530000e-36 163.0
22 TraesCS7D01G442300 chr7B 77.922 154 25 8 1351 1503 504439714 504439859 2.180000e-13 87.9
23 TraesCS7D01G442300 chr1D 99.338 151 1 0 431 581 484142071 484142221 1.560000e-69 274.0
24 TraesCS7D01G442300 chr1D 99.320 147 1 0 434 580 483430847 483430993 2.610000e-67 267.0
25 TraesCS7D01G442300 chr1D 99.275 138 1 0 443 580 483841649 483841786 2.630000e-62 250.0
26 TraesCS7D01G442300 chr1D 89.326 178 16 3 2303 2478 422381911 422381735 2.060000e-53 220.0
27 TraesCS7D01G442300 chr4D 98.013 151 3 0 428 578 1250530 1250680 3.380000e-66 263.0
28 TraesCS7D01G442300 chr4D 89.011 182 13 7 2305 2484 74373293 74373117 7.420000e-53 219.0
29 TraesCS7D01G442300 chr4D 88.462 52 6 0 1171 1222 498949325 498949376 3.680000e-06 63.9
30 TraesCS7D01G442300 chr2D 95.270 148 7 0 431 578 125329261 125329408 7.370000e-58 235.0
31 TraesCS7D01G442300 chr2D 91.429 175 10 5 2300 2472 509744473 509744302 7.370000e-58 235.0
32 TraesCS7D01G442300 chr2D 92.617 149 11 0 430 578 13854107 13854255 9.600000e-52 215.0
33 TraesCS7D01G442300 chr2D 88.679 53 6 0 1170 1222 13753325 13753273 1.020000e-06 65.8
34 TraesCS7D01G442300 chr6B 93.464 153 10 0 431 583 603234817 603234665 1.230000e-55 228.0
35 TraesCS7D01G442300 chr6B 88.950 181 15 5 2291 2469 515066585 515066408 7.420000e-53 219.0
36 TraesCS7D01G442300 chr5D 91.617 167 11 3 2305 2469 368995358 368995523 1.230000e-55 228.0
37 TraesCS7D01G442300 chr5D 76.136 176 31 7 1321 1492 124857659 124857491 1.020000e-11 82.4
38 TraesCS7D01G442300 chr3A 89.944 179 13 5 2306 2482 362899682 362899857 4.430000e-55 226.0
39 TraesCS7D01G442300 chr3A 88.950 181 16 4 2292 2469 154030366 154030545 2.060000e-53 220.0
40 TraesCS7D01G442300 chr6A 90.116 172 15 2 2303 2473 60016876 60016706 5.730000e-54 222.0
41 TraesCS7D01G442300 chr2B 89.655 174 17 1 2300 2473 36309256 36309084 2.060000e-53 220.0
42 TraesCS7D01G442300 chr2B 78.409 176 35 3 3902 4075 710000631 710000805 1.300000e-20 111.0
43 TraesCS7D01G442300 chr2B 75.000 172 33 7 3791 3958 550735834 550735669 2.200000e-08 71.3
44 TraesCS7D01G442300 chr4B 92.715 151 11 0 430 580 618081374 618081224 7.420000e-53 219.0
45 TraesCS7D01G442300 chr4B 78.448 116 24 1 3677 3791 424293035 424292920 1.700000e-09 75.0
46 TraesCS7D01G442300 chr5A 76.471 272 61 3 3792 4061 568887963 568887693 1.280000e-30 145.0
47 TraesCS7D01G442300 chr3D 83.200 125 19 2 3665 3789 473445973 473445851 3.600000e-21 113.0
48 TraesCS7D01G442300 chr5B 76.136 176 31 7 1321 1492 137671834 137671666 1.020000e-11 82.4
49 TraesCS7D01G442300 chr5B 83.077 65 10 1 3710 3773 696192324 696192260 1.710000e-04 58.4
50 TraesCS7D01G442300 chr2A 88.679 53 6 0 1170 1222 15944269 15944217 1.020000e-06 65.8
51 TraesCS7D01G442300 chr4A 84.375 64 10 0 3689 3752 389252331 389252394 3.680000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G442300 chr7D 561754835 561759239 4404 True 8135.000000 8135 100.000000 1 4405 1 chr7D.!!$R1 4404
1 TraesCS7D01G442300 chr7D 561700090 561705082 4992 False 502.333333 804 85.953333 982 3527 3 chr7D.!!$F2 2545
2 TraesCS7D01G442300 chr7A 646582039 646586839 4800 True 900.220000 1940 86.475600 55 4393 5 chr7A.!!$R2 4338
3 TraesCS7D01G442300 chr7A 646483111 646483738 627 False 603.000000 603 84.434000 2897 3515 1 chr7A.!!$F1 618
4 TraesCS7D01G442300 chr7A 646477504 646479079 1575 False 434.100000 784 84.786000 994 1901 2 chr7A.!!$F3 907
5 TraesCS7D01G442300 chr7B 610734625 610738409 3784 True 1336.333333 1921 85.755000 203 4393 3 chr7B.!!$R1 4190
6 TraesCS7D01G442300 chr7B 610478541 610483205 4664 False 554.333333 736 87.803333 982 3659 3 chr7B.!!$F3 2677

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
523 1144 0.037232 ACTCTAAGTCCAGCAACGGC 60.037 55.0 0.00 0.00 41.61 5.68 F
1243 1904 0.036732 TGCTCTTCCTTTCCGTGCAT 59.963 50.0 0.00 0.00 0.00 3.96 F
1246 1907 0.322456 TCTTCCTTTCCGTGCATGGG 60.322 55.0 24.78 12.68 0.00 4.00 F
3002 6713 0.391528 CACACACCATCGGCATCTCA 60.392 55.0 0.00 0.00 0.00 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2063 5442 1.098050 GAGCCATCCGTTTCAGCAAT 58.902 50.000 0.00 0.0 0.00 3.56 R
3002 6713 0.532862 CGGTGAAGGAGTTGCAGTGT 60.533 55.000 0.00 0.0 0.00 3.55 R
3105 6816 2.111043 CGTGGTGCACTTGGTCCT 59.889 61.111 17.98 0.0 31.34 3.85 R
4052 7955 0.110486 TCTTTCCCCTGTCACAAGGC 59.890 55.000 0.00 0.0 35.85 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.462530 TTCTCAGTCAACCGAGACAATAA 57.537 39.130 0.00 0.00 40.98 1.40
23 24 5.661056 TCTCAGTCAACCGAGACAATAAT 57.339 39.130 0.00 0.00 40.98 1.28
24 25 6.769134 TCTCAGTCAACCGAGACAATAATA 57.231 37.500 0.00 0.00 40.98 0.98
25 26 7.348080 TCTCAGTCAACCGAGACAATAATAT 57.652 36.000 0.00 0.00 40.98 1.28
26 27 7.782049 TCTCAGTCAACCGAGACAATAATATT 58.218 34.615 0.00 0.00 40.98 1.28
27 28 8.258007 TCTCAGTCAACCGAGACAATAATATTT 58.742 33.333 0.00 0.00 40.98 1.40
28 29 8.786826 TCAGTCAACCGAGACAATAATATTTT 57.213 30.769 0.00 0.00 40.98 1.82
29 30 9.878667 TCAGTCAACCGAGACAATAATATTTTA 57.121 29.630 0.00 0.00 40.98 1.52
57 58 3.454375 ACGCCATATTAAAGGACGTGAG 58.546 45.455 0.00 0.00 36.69 3.51
117 118 4.796038 ATTGACAAATGAGCTTTCAGGG 57.204 40.909 0.00 0.00 0.00 4.45
118 119 3.228188 TGACAAATGAGCTTTCAGGGT 57.772 42.857 0.00 0.00 0.00 4.34
129 745 2.159114 GCTTTCAGGGTCACAAGCAAAA 60.159 45.455 0.00 0.00 41.16 2.44
144 760 8.977505 TCACAAGCAAAACATATTTTTAAGCTC 58.022 29.630 12.07 0.00 34.94 4.09
182 798 2.307934 TTTTGCCTTGCCTTGTCAAC 57.692 45.000 0.00 0.00 0.00 3.18
187 803 1.136891 GCCTTGCCTTGTCAACAAAGT 59.863 47.619 0.00 0.00 35.15 2.66
207 823 4.679500 TGGTCCATCCAGGTTCCA 57.321 55.556 0.00 0.00 41.93 3.53
208 824 2.074967 TGGTCCATCCAGGTTCCAC 58.925 57.895 0.00 0.00 41.93 4.02
270 886 0.390603 CCCAAATGGAGCGACGTACA 60.391 55.000 0.00 0.00 37.39 2.90
276 892 5.220777 CCAAATGGAGCGACGTACAAATAAT 60.221 40.000 0.00 0.00 37.39 1.28
279 895 6.946229 ATGGAGCGACGTACAAATAATATC 57.054 37.500 0.00 0.00 0.00 1.63
280 896 5.834169 TGGAGCGACGTACAAATAATATCA 58.166 37.500 0.00 0.00 0.00 2.15
304 925 7.817478 TCATAGCCGTATGTAGGTAATCAAATG 59.183 37.037 0.00 0.00 37.81 2.32
325 946 1.787155 CGTACGTACGTATCGCCTAGT 59.213 52.381 33.95 2.13 44.13 2.57
340 961 3.019564 GCCTAGTCTTGACAAATGGCAT 58.980 45.455 15.54 0.00 38.99 4.40
346 967 3.624861 GTCTTGACAAATGGCATCTCGAT 59.375 43.478 0.00 0.00 30.06 3.59
354 975 2.492019 TGGCATCTCGATTCGTACTG 57.508 50.000 5.89 3.49 0.00 2.74
359 980 3.487711 GCATCTCGATTCGTACTGTCACT 60.488 47.826 5.89 0.00 0.00 3.41
396 1017 5.163540 CCAGTAGTACCGCTGACTATTTTCT 60.164 44.000 13.84 0.00 34.87 2.52
398 1019 6.472808 CAGTAGTACCGCTGACTATTTTCTTC 59.527 42.308 8.17 0.00 34.87 2.87
400 1021 5.790593 AGTACCGCTGACTATTTTCTTCAA 58.209 37.500 0.00 0.00 0.00 2.69
404 1025 4.253685 CGCTGACTATTTTCTTCAAGGGA 58.746 43.478 0.00 0.00 0.00 4.20
405 1026 4.331168 CGCTGACTATTTTCTTCAAGGGAG 59.669 45.833 0.00 0.00 0.00 4.30
416 1037 2.534042 TCAAGGGAGTACAGCTAGCT 57.466 50.000 12.68 12.68 0.00 3.32
418 1039 2.103373 CAAGGGAGTACAGCTAGCTGA 58.897 52.381 43.42 26.98 46.30 4.26
419 1040 1.770294 AGGGAGTACAGCTAGCTGAC 58.230 55.000 43.42 33.81 46.30 3.51
420 1041 1.286553 AGGGAGTACAGCTAGCTGACT 59.713 52.381 43.42 36.86 46.30 3.41
421 1042 2.510382 AGGGAGTACAGCTAGCTGACTA 59.490 50.000 43.42 26.99 46.30 2.59
422 1043 3.053544 AGGGAGTACAGCTAGCTGACTAA 60.054 47.826 43.42 25.18 46.30 2.24
423 1044 3.892588 GGGAGTACAGCTAGCTGACTAAT 59.107 47.826 43.42 28.15 46.30 1.73
424 1045 5.071370 GGGAGTACAGCTAGCTGACTAATA 58.929 45.833 43.42 25.64 46.30 0.98
425 1046 5.535406 GGGAGTACAGCTAGCTGACTAATAA 59.465 44.000 43.42 19.94 46.30 1.40
426 1047 6.209788 GGGAGTACAGCTAGCTGACTAATAAT 59.790 42.308 43.42 26.83 46.30 1.28
427 1048 7.393796 GGGAGTACAGCTAGCTGACTAATAATA 59.606 40.741 43.42 23.65 46.30 0.98
428 1049 8.794553 GGAGTACAGCTAGCTGACTAATAATAA 58.205 37.037 43.42 16.51 46.30 1.40
433 1054 9.482627 ACAGCTAGCTGACTAATAATAATGAAC 57.517 33.333 43.42 0.00 46.30 3.18
434 1055 8.930760 CAGCTAGCTGACTAATAATAATGAACC 58.069 37.037 36.47 0.00 46.30 3.62
435 1056 8.651389 AGCTAGCTGACTAATAATAATGAACCA 58.349 33.333 18.57 0.00 0.00 3.67
436 1057 9.442047 GCTAGCTGACTAATAATAATGAACCAT 57.558 33.333 7.70 0.00 0.00 3.55
438 1059 8.103948 AGCTGACTAATAATAATGAACCATGC 57.896 34.615 0.00 0.00 0.00 4.06
439 1060 7.941238 AGCTGACTAATAATAATGAACCATGCT 59.059 33.333 0.00 0.00 0.00 3.79
440 1061 9.219603 GCTGACTAATAATAATGAACCATGCTA 57.780 33.333 0.00 0.00 0.00 3.49
448 1069 7.576750 AATAATGAACCATGCTATACGTACG 57.423 36.000 15.01 15.01 0.00 3.67
449 1070 4.841443 ATGAACCATGCTATACGTACGA 57.159 40.909 24.41 6.04 0.00 3.43
450 1071 3.956233 TGAACCATGCTATACGTACGAC 58.044 45.455 24.41 6.19 0.00 4.34
451 1072 3.377798 TGAACCATGCTATACGTACGACA 59.622 43.478 24.41 9.64 0.00 4.35
452 1073 4.142425 TGAACCATGCTATACGTACGACAA 60.142 41.667 24.41 7.24 0.00 3.18
453 1074 4.579454 ACCATGCTATACGTACGACAAT 57.421 40.909 24.41 14.13 0.00 2.71
454 1075 4.940463 ACCATGCTATACGTACGACAATT 58.060 39.130 24.41 0.61 0.00 2.32
455 1076 4.980434 ACCATGCTATACGTACGACAATTC 59.020 41.667 24.41 6.74 0.00 2.17
456 1077 4.979815 CCATGCTATACGTACGACAATTCA 59.020 41.667 24.41 12.13 0.00 2.57
457 1078 5.107989 CCATGCTATACGTACGACAATTCAC 60.108 44.000 24.41 3.95 0.00 3.18
458 1079 4.030366 TGCTATACGTACGACAATTCACG 58.970 43.478 24.41 0.00 40.15 4.35
470 1091 7.919313 ACGACAATTCACGTACGAATTATAT 57.081 32.000 24.41 7.37 42.36 0.86
471 1092 7.989609 ACGACAATTCACGTACGAATTATATC 58.010 34.615 24.41 13.91 42.36 1.63
472 1093 7.113965 ACGACAATTCACGTACGAATTATATCC 59.886 37.037 24.41 3.08 42.36 2.59
473 1094 7.329438 ACAATTCACGTACGAATTATATCCG 57.671 36.000 24.41 7.75 42.36 4.18
474 1095 7.140705 ACAATTCACGTACGAATTATATCCGA 58.859 34.615 24.41 0.00 42.36 4.55
475 1096 7.811236 ACAATTCACGTACGAATTATATCCGAT 59.189 33.333 24.41 0.00 42.36 4.18
476 1097 7.736031 ATTCACGTACGAATTATATCCGATG 57.264 36.000 24.41 4.75 31.45 3.84
477 1098 5.633927 TCACGTACGAATTATATCCGATGG 58.366 41.667 24.41 0.00 0.00 3.51
478 1099 5.412286 TCACGTACGAATTATATCCGATGGA 59.588 40.000 24.41 0.00 35.55 3.41
479 1100 5.737757 CACGTACGAATTATATCCGATGGAG 59.262 44.000 24.41 0.00 34.05 3.86
480 1101 4.733887 CGTACGAATTATATCCGATGGAGC 59.266 45.833 10.44 0.00 34.05 4.70
481 1102 4.801330 ACGAATTATATCCGATGGAGCA 57.199 40.909 0.00 0.00 34.05 4.26
482 1103 4.748892 ACGAATTATATCCGATGGAGCAG 58.251 43.478 0.00 0.00 34.05 4.24
483 1104 4.462834 ACGAATTATATCCGATGGAGCAGA 59.537 41.667 0.00 0.00 34.05 4.26
484 1105 5.127845 ACGAATTATATCCGATGGAGCAGAT 59.872 40.000 0.00 0.00 34.05 2.90
485 1106 5.689514 CGAATTATATCCGATGGAGCAGATC 59.310 44.000 0.00 0.00 34.05 2.75
486 1107 6.550938 AATTATATCCGATGGAGCAGATCA 57.449 37.500 0.00 0.00 34.05 2.92
487 1108 6.550938 ATTATATCCGATGGAGCAGATCAA 57.449 37.500 0.00 0.00 34.05 2.57
488 1109 2.540265 ATCCGATGGAGCAGATCAAC 57.460 50.000 0.00 0.00 34.05 3.18
489 1110 0.465705 TCCGATGGAGCAGATCAACC 59.534 55.000 0.00 0.00 0.00 3.77
490 1111 0.533755 CCGATGGAGCAGATCAACCC 60.534 60.000 0.00 0.00 0.00 4.11
491 1112 0.877649 CGATGGAGCAGATCAACCCG 60.878 60.000 0.00 0.00 0.00 5.28
492 1113 0.179000 GATGGAGCAGATCAACCCGT 59.821 55.000 0.00 0.00 0.00 5.28
493 1114 1.412710 GATGGAGCAGATCAACCCGTA 59.587 52.381 0.00 0.00 0.00 4.02
494 1115 1.496060 TGGAGCAGATCAACCCGTAT 58.504 50.000 0.00 0.00 0.00 3.06
495 1116 2.673258 TGGAGCAGATCAACCCGTATA 58.327 47.619 0.00 0.00 0.00 1.47
496 1117 3.239449 TGGAGCAGATCAACCCGTATAT 58.761 45.455 0.00 0.00 0.00 0.86
497 1118 3.258372 TGGAGCAGATCAACCCGTATATC 59.742 47.826 0.00 0.00 0.00 1.63
498 1119 3.258372 GGAGCAGATCAACCCGTATATCA 59.742 47.826 0.00 0.00 0.00 2.15
499 1120 4.489810 GAGCAGATCAACCCGTATATCAG 58.510 47.826 0.00 0.00 0.00 2.90
500 1121 3.898123 AGCAGATCAACCCGTATATCAGT 59.102 43.478 0.00 0.00 0.00 3.41
501 1122 4.345257 AGCAGATCAACCCGTATATCAGTT 59.655 41.667 0.00 0.00 0.00 3.16
502 1123 4.449068 GCAGATCAACCCGTATATCAGTTG 59.551 45.833 0.00 0.00 40.72 3.16
503 1124 4.991056 CAGATCAACCCGTATATCAGTTGG 59.009 45.833 0.00 0.00 39.98 3.77
504 1125 4.899457 AGATCAACCCGTATATCAGTTGGA 59.101 41.667 0.00 0.00 39.98 3.53
505 1126 4.395959 TCAACCCGTATATCAGTTGGAC 57.604 45.455 10.16 0.00 39.98 4.02
506 1127 4.028131 TCAACCCGTATATCAGTTGGACT 58.972 43.478 10.16 0.00 39.98 3.85
507 1128 4.098960 TCAACCCGTATATCAGTTGGACTC 59.901 45.833 10.16 0.00 39.98 3.36
508 1129 3.912248 ACCCGTATATCAGTTGGACTCT 58.088 45.455 0.00 0.00 0.00 3.24
509 1130 5.057843 ACCCGTATATCAGTTGGACTCTA 57.942 43.478 0.00 0.00 0.00 2.43
510 1131 5.452255 ACCCGTATATCAGTTGGACTCTAA 58.548 41.667 0.00 0.00 0.00 2.10
511 1132 5.535406 ACCCGTATATCAGTTGGACTCTAAG 59.465 44.000 0.00 0.00 0.00 2.18
512 1133 5.535406 CCCGTATATCAGTTGGACTCTAAGT 59.465 44.000 0.00 0.00 0.00 2.24
513 1134 6.294065 CCCGTATATCAGTTGGACTCTAAGTC 60.294 46.154 0.00 0.00 44.32 3.01
522 1143 1.997669 GACTCTAAGTCCAGCAACGG 58.002 55.000 0.00 0.00 39.28 4.44
523 1144 0.037232 ACTCTAAGTCCAGCAACGGC 60.037 55.000 0.00 0.00 41.61 5.68
524 1145 4.296999 GACTCTAAGTCCAGCAACGGCT 62.297 54.545 0.00 0.00 42.95 5.52
534 1155 3.353600 CAACGGCTGGATGTTGCA 58.646 55.556 0.00 0.00 39.02 4.08
535 1156 1.885157 CAACGGCTGGATGTTGCAT 59.115 52.632 0.00 0.00 39.02 3.96
536 1157 0.179156 CAACGGCTGGATGTTGCATC 60.179 55.000 0.00 0.80 39.02 3.91
537 1158 1.647545 AACGGCTGGATGTTGCATCG 61.648 55.000 0.00 0.00 0.00 3.84
538 1159 2.108514 CGGCTGGATGTTGCATCGT 61.109 57.895 0.00 0.00 0.00 3.73
539 1160 0.809636 CGGCTGGATGTTGCATCGTA 60.810 55.000 0.00 0.00 0.00 3.43
540 1161 0.657840 GGCTGGATGTTGCATCGTAC 59.342 55.000 0.00 0.00 0.00 3.67
541 1162 0.657840 GCTGGATGTTGCATCGTACC 59.342 55.000 0.00 0.00 0.00 3.34
542 1163 2.011548 GCTGGATGTTGCATCGTACCA 61.012 52.381 0.00 0.00 0.00 3.25
543 1164 2.355197 CTGGATGTTGCATCGTACCAA 58.645 47.619 0.00 0.00 0.00 3.67
544 1165 2.746904 CTGGATGTTGCATCGTACCAAA 59.253 45.455 0.00 0.00 0.00 3.28
545 1166 3.351740 TGGATGTTGCATCGTACCAAAT 58.648 40.909 0.00 0.00 0.00 2.32
546 1167 3.376859 TGGATGTTGCATCGTACCAAATC 59.623 43.478 0.00 0.00 0.00 2.17
547 1168 3.546020 GGATGTTGCATCGTACCAAATCG 60.546 47.826 0.00 0.00 0.00 3.34
548 1169 1.735018 TGTTGCATCGTACCAAATCGG 59.265 47.619 0.00 0.00 42.50 4.18
549 1170 2.004017 GTTGCATCGTACCAAATCGGA 58.996 47.619 0.00 0.00 38.63 4.55
550 1171 1.647346 TGCATCGTACCAAATCGGAC 58.353 50.000 0.00 0.00 38.63 4.79
551 1172 1.066787 TGCATCGTACCAAATCGGACA 60.067 47.619 0.00 0.00 38.63 4.02
552 1173 2.004017 GCATCGTACCAAATCGGACAA 58.996 47.619 0.00 0.00 38.63 3.18
553 1174 2.030457 GCATCGTACCAAATCGGACAAG 59.970 50.000 0.00 0.00 38.63 3.16
554 1175 3.259064 CATCGTACCAAATCGGACAAGT 58.741 45.455 0.00 0.00 38.63 3.16
555 1176 2.950433 TCGTACCAAATCGGACAAGTC 58.050 47.619 0.00 0.00 38.63 3.01
556 1177 2.296752 TCGTACCAAATCGGACAAGTCA 59.703 45.455 2.29 0.00 38.63 3.41
557 1178 3.056393 TCGTACCAAATCGGACAAGTCAT 60.056 43.478 2.29 0.00 38.63 3.06
558 1179 3.062099 CGTACCAAATCGGACAAGTCATG 59.938 47.826 2.29 0.00 38.63 3.07
560 1181 3.486383 ACCAAATCGGACAAGTCATGTT 58.514 40.909 2.29 0.00 44.12 2.71
561 1182 3.502211 ACCAAATCGGACAAGTCATGTTC 59.498 43.478 2.29 0.00 44.12 3.18
567 1188 2.669364 GGACAAGTCATGTTCGTACGT 58.331 47.619 16.05 0.00 44.12 3.57
568 1189 2.407361 GGACAAGTCATGTTCGTACGTG 59.593 50.000 16.05 7.99 44.12 4.49
569 1190 3.047796 GACAAGTCATGTTCGTACGTGT 58.952 45.455 16.05 8.60 44.12 4.49
570 1191 4.221342 GACAAGTCATGTTCGTACGTGTA 58.779 43.478 16.05 2.87 44.12 2.90
571 1192 4.224433 ACAAGTCATGTTCGTACGTGTAG 58.776 43.478 16.05 3.35 40.06 2.74
572 1193 4.224433 CAAGTCATGTTCGTACGTGTAGT 58.776 43.478 16.05 2.41 41.20 2.73
573 1194 5.049474 ACAAGTCATGTTCGTACGTGTAGTA 60.049 40.000 16.05 0.00 40.06 1.82
574 1195 5.213913 AGTCATGTTCGTACGTGTAGTAG 57.786 43.478 16.05 1.22 41.20 2.57
575 1196 4.692625 AGTCATGTTCGTACGTGTAGTAGT 59.307 41.667 16.05 0.00 41.20 2.73
576 1197 5.180117 AGTCATGTTCGTACGTGTAGTAGTT 59.820 40.000 16.05 0.00 41.20 2.24
577 1198 5.853282 GTCATGTTCGTACGTGTAGTAGTTT 59.147 40.000 16.05 0.00 41.20 2.66
578 1199 6.031833 GTCATGTTCGTACGTGTAGTAGTTTC 59.968 42.308 16.05 0.00 41.20 2.78
581 1202 4.983215 TCGTACGTGTAGTAGTTTCGAA 57.017 40.909 16.05 0.00 35.72 3.71
596 1217 8.122952 AGTAGTTTCGAATAATAATTGCAGTGC 58.877 33.333 8.58 8.58 0.00 4.40
649 1270 3.005539 GCTCCCCAGGCTGTCTGA 61.006 66.667 11.55 5.77 46.18 3.27
650 1271 2.985456 CTCCCCAGGCTGTCTGAC 59.015 66.667 11.55 0.00 46.18 3.51
651 1272 2.607750 TCCCCAGGCTGTCTGACC 60.608 66.667 11.55 0.00 46.18 4.02
652 1273 2.930019 CCCCAGGCTGTCTGACCA 60.930 66.667 11.55 0.00 46.18 4.02
653 1274 2.304056 CCCCAGGCTGTCTGACCAT 61.304 63.158 11.55 0.00 46.18 3.55
654 1275 1.222936 CCCAGGCTGTCTGACCATC 59.777 63.158 11.55 0.00 46.18 3.51
655 1276 1.153489 CCAGGCTGTCTGACCATCG 60.153 63.158 11.55 0.00 46.18 3.84
657 1278 1.986757 AGGCTGTCTGACCATCGCT 60.987 57.895 5.17 0.00 0.00 4.93
658 1279 1.078848 GGCTGTCTGACCATCGCTT 60.079 57.895 5.17 0.00 0.00 4.68
661 1282 1.800805 CTGTCTGACCATCGCTTTGT 58.199 50.000 5.17 0.00 0.00 2.83
662 1283 2.146342 CTGTCTGACCATCGCTTTGTT 58.854 47.619 5.17 0.00 0.00 2.83
663 1284 3.325870 CTGTCTGACCATCGCTTTGTTA 58.674 45.455 5.17 0.00 0.00 2.41
664 1285 3.325870 TGTCTGACCATCGCTTTGTTAG 58.674 45.455 5.17 0.00 0.00 2.34
665 1286 2.094417 GTCTGACCATCGCTTTGTTAGC 59.906 50.000 0.00 0.00 46.83 3.09
726 1347 3.181520 CGATTTCTTTACTTGTCAGGGCG 60.182 47.826 0.00 0.00 0.00 6.13
728 1349 0.321298 TCTTTACTTGTCAGGGCGCC 60.321 55.000 21.18 21.18 0.00 6.53
730 1351 0.321298 TTTACTTGTCAGGGCGCCTC 60.321 55.000 28.56 16.85 0.00 4.70
818 1442 4.994756 CCCAGCACCAACCCCACC 62.995 72.222 0.00 0.00 0.00 4.61
848 1472 4.161295 ATTGCCGCCGCTAGCTGA 62.161 61.111 13.93 0.00 40.39 4.26
852 1476 4.897357 CCGCCGCTAGCTGATGCA 62.897 66.667 13.93 0.00 42.74 3.96
853 1477 2.891936 CGCCGCTAGCTGATGCAA 60.892 61.111 13.93 0.00 42.74 4.08
857 1481 2.541120 CGCTAGCTGATGCAAGGCC 61.541 63.158 13.93 0.00 42.74 5.19
858 1482 1.452651 GCTAGCTGATGCAAGGCCA 60.453 57.895 7.70 0.00 42.74 5.36
889 1519 2.035176 CGTGCGTATAAAAAGCGATCGT 60.035 45.455 17.81 0.26 35.02 3.73
893 1523 3.277481 CGTATAAAAAGCGATCGTTGGC 58.723 45.455 17.81 0.00 0.00 4.52
895 1525 2.892373 TAAAAAGCGATCGTTGGCTG 57.108 45.000 17.81 0.00 36.97 4.85
896 1526 0.951558 AAAAAGCGATCGTTGGCTGT 59.048 45.000 17.81 0.00 36.97 4.40
897 1527 1.803334 AAAAGCGATCGTTGGCTGTA 58.197 45.000 17.81 0.00 36.97 2.74
898 1528 1.076332 AAAGCGATCGTTGGCTGTAC 58.924 50.000 17.81 0.00 36.97 2.90
899 1529 0.246635 AAGCGATCGTTGGCTGTACT 59.753 50.000 17.81 0.00 36.97 2.73
900 1530 1.100510 AGCGATCGTTGGCTGTACTA 58.899 50.000 17.81 0.00 35.37 1.82
901 1531 1.681793 AGCGATCGTTGGCTGTACTAT 59.318 47.619 17.81 0.00 35.37 2.12
902 1532 2.100916 AGCGATCGTTGGCTGTACTATT 59.899 45.455 17.81 0.00 35.37 1.73
903 1533 2.864343 GCGATCGTTGGCTGTACTATTT 59.136 45.455 17.81 0.00 0.00 1.40
930 1577 0.674895 GAGCATCCTCGTGCCTTTGT 60.675 55.000 0.00 0.00 46.19 2.83
942 1589 1.977594 GCCTTTGTACACCATCGCCG 61.978 60.000 0.00 0.00 0.00 6.46
957 1604 4.200283 CCGGCCACTCGAGAGCTC 62.200 72.222 21.68 5.27 0.00 4.09
958 1605 4.200283 CGGCCACTCGAGAGCTCC 62.200 72.222 21.68 13.58 0.00 4.70
959 1606 3.071206 GGCCACTCGAGAGCTCCA 61.071 66.667 21.68 0.00 0.00 3.86
960 1607 2.493973 GCCACTCGAGAGCTCCAG 59.506 66.667 21.68 6.75 0.00 3.86
961 1608 3.074999 GCCACTCGAGAGCTCCAGG 62.075 68.421 21.68 9.60 0.00 4.45
962 1609 2.493973 CACTCGAGAGCTCCAGGC 59.506 66.667 21.68 0.00 42.19 4.85
982 1629 0.802494 GCGCTCTAGGCTCTAGCTAG 59.198 60.000 15.01 15.01 41.70 3.42
983 1630 0.802494 CGCTCTAGGCTCTAGCTAGC 59.198 60.000 16.35 6.62 41.99 3.42
984 1631 1.610624 CGCTCTAGGCTCTAGCTAGCT 60.611 57.143 23.12 23.12 42.37 3.32
985 1632 2.354303 CGCTCTAGGCTCTAGCTAGCTA 60.354 54.545 22.85 22.85 42.37 3.32
986 1633 3.270877 GCTCTAGGCTCTAGCTAGCTAG 58.729 54.545 36.20 36.20 45.38 3.42
987 1634 3.873910 CTCTAGGCTCTAGCTAGCTAGG 58.126 54.545 38.82 31.24 44.45 3.02
992 1639 1.253100 CTCTAGCTAGCTAGGGTGGC 58.747 60.000 38.82 8.31 44.45 5.01
1243 1904 0.036732 TGCTCTTCCTTTCCGTGCAT 59.963 50.000 0.00 0.00 0.00 3.96
1246 1907 0.322456 TCTTCCTTTCCGTGCATGGG 60.322 55.000 24.78 12.68 0.00 4.00
1255 1916 4.856801 GTGCATGGGGACGGCGAT 62.857 66.667 16.62 0.00 36.17 4.58
1291 1952 1.011684 CGCGCGTGTTTGTTCTGAA 60.012 52.632 24.19 0.00 0.00 3.02
1301 1962 5.390251 CGTGTTTGTTCTGAATCCTGATCAG 60.390 44.000 16.24 16.24 44.53 2.90
1536 2197 1.338200 CGTAAGTGCTCTGCTTCCCTT 60.338 52.381 0.00 0.00 0.00 3.95
1537 2198 2.351455 GTAAGTGCTCTGCTTCCCTTC 58.649 52.381 0.00 0.00 0.00 3.46
1548 2245 4.974438 TCCCTTCCCACCCACGCT 62.974 66.667 0.00 0.00 0.00 5.07
1551 2251 2.359975 CTTCCCACCCACGCTTCC 60.360 66.667 0.00 0.00 0.00 3.46
1726 2444 1.305381 CCTCCTCACCTCCTTCCGT 60.305 63.158 0.00 0.00 0.00 4.69
1787 2505 5.712917 TCAGGTAACAATTCCCACCAATTAC 59.287 40.000 0.00 0.00 41.41 1.89
1916 3716 3.747529 GGTAGGATAGTCGAGTGAGTAGC 59.252 52.174 2.10 0.00 36.01 3.58
2063 5442 1.077357 GGTGGTGGTGTGGTGTTGA 60.077 57.895 0.00 0.00 0.00 3.18
2135 5517 1.066215 TCTTGCCGACACTATGTGCAT 60.066 47.619 0.00 0.00 36.98 3.96
2201 5851 7.554118 ACTTTGGTCGATGTTGATATCATTTCT 59.446 33.333 6.17 0.00 0.00 2.52
2203 5853 5.691754 TGGTCGATGTTGATATCATTTCTCG 59.308 40.000 6.17 12.40 0.00 4.04
2243 5896 9.003658 GGCTATGCATTGTAGTATTTGTTCTAT 57.996 33.333 3.54 0.00 0.00 1.98
2275 5933 1.713937 TTGTTGCACTGCACGGTCAG 61.714 55.000 2.26 4.87 38.71 3.51
2280 5938 0.671781 GCACTGCACGGTCAGAGATT 60.672 55.000 12.23 0.00 37.51 2.40
2308 5966 5.893897 ACGCTAAGTTGCTAACTACTACT 57.106 39.130 2.60 0.00 41.91 2.57
2309 5967 5.878133 ACGCTAAGTTGCTAACTACTACTC 58.122 41.667 2.60 0.00 41.91 2.59
2310 5968 5.163673 ACGCTAAGTTGCTAACTACTACTCC 60.164 44.000 2.60 0.00 41.91 3.85
2311 5969 5.590145 GCTAAGTTGCTAACTACTACTCCC 58.410 45.833 2.60 0.00 41.91 4.30
2312 5970 5.360429 GCTAAGTTGCTAACTACTACTCCCT 59.640 44.000 2.60 0.00 41.91 4.20
2313 5971 5.918426 AAGTTGCTAACTACTACTCCCTC 57.082 43.478 2.60 0.00 41.91 4.30
2314 5972 4.279982 AGTTGCTAACTACTACTCCCTCC 58.720 47.826 0.44 0.00 40.69 4.30
2315 5973 2.928334 TGCTAACTACTACTCCCTCCG 58.072 52.381 0.00 0.00 0.00 4.63
2316 5974 2.228925 GCTAACTACTACTCCCTCCGG 58.771 57.143 0.00 0.00 0.00 5.14
2317 5975 2.422661 GCTAACTACTACTCCCTCCGGT 60.423 54.545 0.00 0.00 0.00 5.28
2318 5976 2.915657 AACTACTACTCCCTCCGGTT 57.084 50.000 0.00 0.00 0.00 4.44
2319 5977 2.433662 ACTACTACTCCCTCCGGTTC 57.566 55.000 0.00 0.00 0.00 3.62
2320 5978 1.064091 ACTACTACTCCCTCCGGTTCC 60.064 57.143 0.00 0.00 0.00 3.62
2321 5979 1.214923 CTACTACTCCCTCCGGTTCCT 59.785 57.143 0.00 0.00 0.00 3.36
2322 5980 1.302907 ACTACTCCCTCCGGTTCCTA 58.697 55.000 0.00 0.00 0.00 2.94
2323 5981 1.642762 ACTACTCCCTCCGGTTCCTAA 59.357 52.381 0.00 0.00 0.00 2.69
2324 5982 2.043526 ACTACTCCCTCCGGTTCCTAAA 59.956 50.000 0.00 0.00 0.00 1.85
2325 5983 2.265526 ACTCCCTCCGGTTCCTAAAT 57.734 50.000 0.00 0.00 0.00 1.40
2326 5984 2.558974 ACTCCCTCCGGTTCCTAAATT 58.441 47.619 0.00 0.00 0.00 1.82
2327 5985 2.917600 ACTCCCTCCGGTTCCTAAATTT 59.082 45.455 0.00 0.00 0.00 1.82
2328 5986 3.332783 ACTCCCTCCGGTTCCTAAATTTT 59.667 43.478 0.00 0.00 0.00 1.82
2329 5987 4.202641 ACTCCCTCCGGTTCCTAAATTTTT 60.203 41.667 0.00 0.00 0.00 1.94
2330 5988 4.083565 TCCCTCCGGTTCCTAAATTTTTG 58.916 43.478 0.00 0.00 0.00 2.44
2331 5989 3.830178 CCCTCCGGTTCCTAAATTTTTGT 59.170 43.478 0.00 0.00 0.00 2.83
2332 5990 4.082408 CCCTCCGGTTCCTAAATTTTTGTC 60.082 45.833 0.00 0.00 0.00 3.18
2333 5991 4.765339 CCTCCGGTTCCTAAATTTTTGTCT 59.235 41.667 0.00 0.00 0.00 3.41
2334 5992 5.243060 CCTCCGGTTCCTAAATTTTTGTCTT 59.757 40.000 0.00 0.00 0.00 3.01
2335 5993 6.239204 CCTCCGGTTCCTAAATTTTTGTCTTT 60.239 38.462 0.00 0.00 0.00 2.52
2336 5994 7.114866 TCCGGTTCCTAAATTTTTGTCTTTT 57.885 32.000 0.00 0.00 0.00 2.27
2337 5995 8.235359 TCCGGTTCCTAAATTTTTGTCTTTTA 57.765 30.769 0.00 0.00 0.00 1.52
2338 5996 8.693625 TCCGGTTCCTAAATTTTTGTCTTTTAA 58.306 29.630 0.00 0.00 0.00 1.52
2339 5997 9.315525 CCGGTTCCTAAATTTTTGTCTTTTAAA 57.684 29.630 0.00 0.00 0.00 1.52
2411 6069 7.121974 AGTGTAGATTCACTCATTTGTTTCG 57.878 36.000 0.00 0.00 44.07 3.46
2412 6070 6.706270 AGTGTAGATTCACTCATTTGTTTCGT 59.294 34.615 0.00 0.00 44.07 3.85
2413 6071 7.870954 AGTGTAGATTCACTCATTTGTTTCGTA 59.129 33.333 0.00 0.00 44.07 3.43
2414 6072 8.656849 GTGTAGATTCACTCATTTGTTTCGTAT 58.343 33.333 0.00 0.00 35.68 3.06
2415 6073 8.655970 TGTAGATTCACTCATTTGTTTCGTATG 58.344 33.333 0.00 0.00 0.00 2.39
2416 6074 7.672983 AGATTCACTCATTTGTTTCGTATGT 57.327 32.000 0.00 0.00 0.00 2.29
2417 6075 8.771920 AGATTCACTCATTTGTTTCGTATGTA 57.228 30.769 0.00 0.00 0.00 2.29
2418 6076 8.873830 AGATTCACTCATTTGTTTCGTATGTAG 58.126 33.333 0.00 0.00 0.00 2.74
2419 6077 7.956420 TTCACTCATTTGTTTCGTATGTAGT 57.044 32.000 0.00 0.00 0.00 2.73
2420 6078 7.576750 TCACTCATTTGTTTCGTATGTAGTC 57.423 36.000 0.00 0.00 0.00 2.59
2421 6079 7.149307 TCACTCATTTGTTTCGTATGTAGTCA 58.851 34.615 0.00 0.00 0.00 3.41
2422 6080 7.115805 TCACTCATTTGTTTCGTATGTAGTCAC 59.884 37.037 0.00 0.00 0.00 3.67
2423 6081 7.116376 CACTCATTTGTTTCGTATGTAGTCACT 59.884 37.037 0.00 0.00 0.00 3.41
2424 6082 7.656137 ACTCATTTGTTTCGTATGTAGTCACTT 59.344 33.333 0.00 0.00 0.00 3.16
2425 6083 7.792925 TCATTTGTTTCGTATGTAGTCACTTG 58.207 34.615 0.00 0.00 0.00 3.16
2426 6084 7.439955 TCATTTGTTTCGTATGTAGTCACTTGT 59.560 33.333 0.00 0.00 0.00 3.16
2427 6085 7.542534 TTTGTTTCGTATGTAGTCACTTGTT 57.457 32.000 0.00 0.00 0.00 2.83
2428 6086 6.519353 TGTTTCGTATGTAGTCACTTGTTG 57.481 37.500 0.00 0.00 0.00 3.33
2429 6087 6.274579 TGTTTCGTATGTAGTCACTTGTTGA 58.725 36.000 0.00 0.00 0.00 3.18
2430 6088 6.757478 TGTTTCGTATGTAGTCACTTGTTGAA 59.243 34.615 0.00 0.00 35.39 2.69
2431 6089 7.278203 TGTTTCGTATGTAGTCACTTGTTGAAA 59.722 33.333 0.00 0.00 35.39 2.69
2432 6090 7.956420 TTCGTATGTAGTCACTTGTTGAAAT 57.044 32.000 0.00 0.00 35.39 2.17
2433 6091 7.576750 TCGTATGTAGTCACTTGTTGAAATC 57.423 36.000 0.00 0.00 35.39 2.17
2434 6092 7.375834 TCGTATGTAGTCACTTGTTGAAATCT 58.624 34.615 0.00 0.00 35.39 2.40
2435 6093 7.541091 TCGTATGTAGTCACTTGTTGAAATCTC 59.459 37.037 0.00 0.00 35.39 2.75
2436 6094 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
2437 6095 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
2438 6096 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
2439 6097 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
2440 6098 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
2441 6099 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
2442 6100 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
2443 6101 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
2444 6102 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
2445 6103 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
2446 6104 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
2447 6105 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
2450 6108 9.342308 TGTTGAAATCTCTAGAAAGACAAATGT 57.658 29.630 0.00 0.00 0.00 2.71
2458 6116 9.490379 TCTCTAGAAAGACAAATGTTTAGGAAC 57.510 33.333 0.00 0.00 36.29 3.62
2459 6117 8.306680 TCTAGAAAGACAAATGTTTAGGAACG 57.693 34.615 0.00 0.00 38.65 3.95
2460 6118 6.313744 AGAAAGACAAATGTTTAGGAACGG 57.686 37.500 0.00 0.00 38.65 4.44
2461 6119 6.059484 AGAAAGACAAATGTTTAGGAACGGA 58.941 36.000 0.00 0.00 38.65 4.69
2462 6120 6.715264 AGAAAGACAAATGTTTAGGAACGGAT 59.285 34.615 0.00 0.00 38.65 4.18
2463 6121 5.880054 AGACAAATGTTTAGGAACGGATG 57.120 39.130 0.00 0.00 38.65 3.51
2464 6122 5.556915 AGACAAATGTTTAGGAACGGATGA 58.443 37.500 0.00 0.00 38.65 2.92
2465 6123 6.001460 AGACAAATGTTTAGGAACGGATGAA 58.999 36.000 0.00 0.00 38.65 2.57
2466 6124 6.149474 AGACAAATGTTTAGGAACGGATGAAG 59.851 38.462 0.00 0.00 38.65 3.02
2467 6125 5.768164 ACAAATGTTTAGGAACGGATGAAGT 59.232 36.000 0.00 0.00 38.65 3.01
2468 6126 6.938030 ACAAATGTTTAGGAACGGATGAAGTA 59.062 34.615 0.00 0.00 38.65 2.24
2469 6127 6.980051 AATGTTTAGGAACGGATGAAGTAC 57.020 37.500 0.00 0.00 38.65 2.73
2504 6162 3.981071 TTGGAATTCTCGGACATGACT 57.019 42.857 5.23 0.00 0.00 3.41
2550 6220 2.224042 TGATCAGTGACAGTGTGGACAC 60.224 50.000 0.00 2.60 46.77 3.67
2633 6303 2.920490 GACATCTTCGACTCAACTCTGC 59.080 50.000 0.00 0.00 0.00 4.26
2636 6306 1.270826 TCTTCGACTCAACTCTGCCAG 59.729 52.381 0.00 0.00 0.00 4.85
2735 6405 7.470147 GCAAGCTGTTCTGATGTATACCTACTA 60.470 40.741 0.00 0.00 0.00 1.82
2753 6423 7.117397 ACCTACTAACTATTGCTGTCTGTCTA 58.883 38.462 0.00 0.00 0.00 2.59
2839 6510 5.120399 TCCATGTGTTCTTTAAACGACACT 58.880 37.500 21.04 10.53 42.09 3.55
2845 6516 8.738199 TGTGTTCTTTAAACGACACTATCTAG 57.262 34.615 21.04 0.00 42.09 2.43
2904 6577 7.253422 ACTTACTGAATTGCATTGTATTGCTC 58.747 34.615 0.00 0.00 43.18 4.26
2912 6585 3.501828 TGCATTGTATTGCTCGAACTTGT 59.498 39.130 0.00 0.00 43.18 3.16
2933 6644 7.282224 ACTTGTTGAGTTCTGCACTTGTTATAA 59.718 33.333 0.00 0.00 35.01 0.98
2975 6686 3.598693 TCCATCATGTGCCAATACCAT 57.401 42.857 0.00 0.00 0.00 3.55
3002 6713 0.391528 CACACACCATCGGCATCTCA 60.392 55.000 0.00 0.00 0.00 3.27
3038 6749 1.206371 ACCGAGCGGCTATACAACTTT 59.794 47.619 9.14 0.00 39.32 2.66
3105 6816 2.965520 TATGCTGCCAACCTCCGCA 61.966 57.895 0.00 0.00 34.83 5.69
3194 6905 3.442977 CCTTTGACACTAGCTACTACCGT 59.557 47.826 0.00 0.00 0.00 4.83
3209 6920 2.264794 CGTGGCCTCCTAAAGCGT 59.735 61.111 3.32 0.00 0.00 5.07
3251 6962 2.587194 GCGCTCATCACCGATGCT 60.587 61.111 0.00 0.00 39.63 3.79
3254 6965 1.816679 GCTCATCACCGATGCTGCA 60.817 57.895 4.13 4.13 39.63 4.41
3516 7253 5.017490 TCCTTGTTTGTAAGGTGGTTTTCA 58.983 37.500 4.63 0.00 45.94 2.69
3521 7258 6.159988 TGTTTGTAAGGTGGTTTTCAAGTTG 58.840 36.000 0.00 0.00 0.00 3.16
3529 7266 2.494073 TGGTTTTCAAGTTGTGGTCCAC 59.506 45.455 15.64 15.64 34.56 4.02
3536 7273 2.450609 AGTTGTGGTCCACGTGATAC 57.549 50.000 19.30 14.49 37.14 2.24
3550 7287 6.152154 TCCACGTGATACATGTCTTCTTTCTA 59.848 38.462 19.30 0.00 30.47 2.10
3679 7579 9.823647 TTCAACCTGTATCTTTTTAATGCAAAA 57.176 25.926 0.00 0.00 34.26 2.44
3690 7590 7.826260 TTTTTAATGCAAAAAGGATCGGATC 57.174 32.000 9.54 9.54 40.39 3.36
3693 7593 5.757850 AATGCAAAAAGGATCGGATCTAC 57.242 39.130 16.96 2.34 0.00 2.59
3764 7665 5.249780 ACAACAAGGTATATGAACCACCA 57.750 39.130 0.00 0.00 42.40 4.17
3789 7690 1.314534 CCATTGCCGCCATCAGAACA 61.315 55.000 0.00 0.00 0.00 3.18
3790 7691 0.527113 CATTGCCGCCATCAGAACAA 59.473 50.000 0.00 0.00 0.00 2.83
3797 7698 3.487544 GCCGCCATCAGAACAAAATCTAC 60.488 47.826 0.00 0.00 0.00 2.59
3799 7700 3.370978 CGCCATCAGAACAAAATCTACGT 59.629 43.478 0.00 0.00 0.00 3.57
3808 7709 2.492484 ACAAAATCTACGTCGGAGCTCT 59.508 45.455 14.64 0.00 0.00 4.09
3826 7727 1.100510 CTGTCTAATCCGTCCCGACA 58.899 55.000 0.00 0.00 33.94 4.35
3852 7753 3.846405 TTGAGGTGGGTCGGAGCCT 62.846 63.158 25.16 6.98 36.53 4.58
3865 7766 1.134965 CGGAGCCTGGAAGACTAACTG 60.135 57.143 0.00 0.00 34.07 3.16
3866 7767 2.180276 GGAGCCTGGAAGACTAACTGA 58.820 52.381 0.00 0.00 34.07 3.41
3879 7782 6.168270 AGACTAACTGAAAGAAGAAGCACT 57.832 37.500 0.00 0.00 37.43 4.40
3880 7783 5.988561 AGACTAACTGAAAGAAGAAGCACTG 59.011 40.000 0.00 0.00 37.43 3.66
3891 7794 1.973515 AGAAGCACTGTCATCTGTCCA 59.026 47.619 0.00 0.00 0.00 4.02
3900 7803 2.437359 ATCTGTCCAAGCGCTGCC 60.437 61.111 12.58 0.00 0.00 4.85
3920 7823 0.323629 CCTGCGAGGACTAAAACCCA 59.676 55.000 0.00 0.00 37.67 4.51
3934 7837 7.344093 GGACTAAAACCCAACCTATCTACTAGT 59.656 40.741 0.00 0.00 0.00 2.57
3940 7843 4.521256 CCCAACCTATCTACTAGTCAGAGC 59.479 50.000 0.00 0.00 0.00 4.09
3964 7867 0.694444 GCACCAAGATCCCCTCCCTA 60.694 60.000 0.00 0.00 0.00 3.53
3970 7873 1.837499 GATCCCCTCCCTACCACCG 60.837 68.421 0.00 0.00 0.00 4.94
3974 7877 2.038329 CCTCCCTACCACCGGTCA 59.962 66.667 2.59 0.00 37.09 4.02
4013 7916 4.208686 AGACGAATCCCCGCGCTC 62.209 66.667 5.56 0.00 0.00 5.03
4014 7917 4.508128 GACGAATCCCCGCGCTCA 62.508 66.667 5.56 0.00 0.00 4.26
4015 7918 3.792053 GACGAATCCCCGCGCTCAT 62.792 63.158 5.56 0.00 0.00 2.90
4031 7934 2.102252 GCTCATCGGAGAAGATCAAGGT 59.898 50.000 0.00 0.00 44.26 3.50
4040 7943 3.938334 GAGAAGATCAAGGTGAGAAAGGC 59.062 47.826 0.00 0.00 0.00 4.35
4044 7947 4.734266 AGATCAAGGTGAGAAAGGCTTTT 58.266 39.130 14.66 4.22 0.00 2.27
4052 7955 3.680458 GTGAGAAAGGCTTTTCCTAGTCG 59.320 47.826 16.88 0.00 46.94 4.18
4058 7961 1.610886 GGCTTTTCCTAGTCGCCTTGT 60.611 52.381 0.00 0.00 37.76 3.16
4063 7966 0.888619 TCCTAGTCGCCTTGTGACAG 59.111 55.000 10.10 5.70 44.42 3.51
4072 7975 1.478654 GCCTTGTGACAGGGGAAAGAA 60.479 52.381 15.90 0.00 34.01 2.52
4074 7977 3.295973 CCTTGTGACAGGGGAAAGAAAA 58.704 45.455 5.74 0.00 0.00 2.29
4076 7979 4.202151 CCTTGTGACAGGGGAAAGAAAAAG 60.202 45.833 5.74 0.00 0.00 2.27
4078 7981 3.699038 TGTGACAGGGGAAAGAAAAAGTG 59.301 43.478 0.00 0.00 0.00 3.16
4084 7987 2.863740 GGGGAAAGAAAAAGTGTTTGCG 59.136 45.455 0.00 0.00 32.30 4.85
4095 7998 0.736053 GTGTTTGCGGAGAACCACAA 59.264 50.000 0.00 0.00 36.58 3.33
4136 8039 1.985159 AGCTGGACAACCAACTCCATA 59.015 47.619 0.00 0.00 46.32 2.74
4141 8044 3.886505 TGGACAACCAACTCCATAAACAC 59.113 43.478 0.00 0.00 43.91 3.32
4147 8050 5.161943 ACCAACTCCATAAACACTACTCC 57.838 43.478 0.00 0.00 0.00 3.85
4168 8071 2.028876 ACCAGCAAACCTAAACACCAC 58.971 47.619 0.00 0.00 0.00 4.16
4171 8074 3.502211 CCAGCAAACCTAAACACCACTAG 59.498 47.826 0.00 0.00 0.00 2.57
4183 8086 8.507249 CCTAAACACCACTAGAAAGAAATGAAG 58.493 37.037 0.00 0.00 0.00 3.02
4188 8091 6.876257 CACCACTAGAAAGAAATGAAGTAGCT 59.124 38.462 0.00 0.00 0.00 3.32
4219 8122 4.257731 TGTTAAGCTTACATCCATTGCGA 58.742 39.130 5.45 0.00 0.00 5.10
4245 8149 9.057089 ACTCTGACACTTATTTTTAACAGGAAG 57.943 33.333 0.00 0.00 0.00 3.46
4246 8150 9.273016 CTCTGACACTTATTTTTAACAGGAAGA 57.727 33.333 0.00 0.00 0.00 2.87
4278 8182 9.810545 ACTATCTAGAGCTTACACATCTTTTTC 57.189 33.333 0.00 0.00 0.00 2.29
4297 8201 2.358258 TCCTTCTCCAACATTTCCCCT 58.642 47.619 0.00 0.00 0.00 4.79
4299 8203 2.621668 CCTTCTCCAACATTTCCCCTCC 60.622 54.545 0.00 0.00 0.00 4.30
4301 8205 0.704076 CTCCAACATTTCCCCTCCCA 59.296 55.000 0.00 0.00 0.00 4.37
4304 8208 0.251165 CAACATTTCCCCTCCCACGT 60.251 55.000 0.00 0.00 0.00 4.49
4312 8218 0.616679 CCCCTCCCACGTCTCCTTTA 60.617 60.000 0.00 0.00 0.00 1.85
4316 8222 3.270877 CCTCCCACGTCTCCTTTAAATG 58.729 50.000 0.00 0.00 0.00 2.32
4357 8264 3.887716 ACCACACTACAGTTACTCGAAGT 59.112 43.478 0.00 0.00 0.00 3.01
4402 8309 4.755266 TCCTATGAAGAAGCCTAACCAC 57.245 45.455 0.00 0.00 0.00 4.16
4403 8310 3.454812 TCCTATGAAGAAGCCTAACCACC 59.545 47.826 0.00 0.00 0.00 4.61
4404 8311 3.456277 CCTATGAAGAAGCCTAACCACCT 59.544 47.826 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 8.786826 AAAATATTATTGTCTCGGTTGACTGA 57.213 30.769 0.00 0.00 37.79 3.41
31 32 6.370994 TCACGTCCTTTAATATGGCGTAAAAA 59.629 34.615 0.00 0.00 35.55 1.94
32 33 5.873712 TCACGTCCTTTAATATGGCGTAAAA 59.126 36.000 0.00 0.00 35.55 1.52
33 34 5.417811 TCACGTCCTTTAATATGGCGTAAA 58.582 37.500 0.00 0.00 35.55 2.01
34 35 5.008619 TCACGTCCTTTAATATGGCGTAA 57.991 39.130 0.00 0.00 35.55 3.18
35 36 4.098349 ACTCACGTCCTTTAATATGGCGTA 59.902 41.667 0.00 0.00 35.55 4.42
36 37 3.118884 ACTCACGTCCTTTAATATGGCGT 60.119 43.478 0.00 0.00 36.87 5.68
37 38 3.454375 ACTCACGTCCTTTAATATGGCG 58.546 45.455 0.00 0.00 0.00 5.69
38 39 5.598769 AGTACTCACGTCCTTTAATATGGC 58.401 41.667 0.00 0.00 0.00 4.40
39 40 8.488651 AAAAGTACTCACGTCCTTTAATATGG 57.511 34.615 0.00 0.00 29.28 2.74
46 47 8.347771 GGAATTTAAAAAGTACTCACGTCCTTT 58.652 33.333 0.00 0.00 31.54 3.11
47 48 7.718314 AGGAATTTAAAAAGTACTCACGTCCTT 59.282 33.333 0.00 0.00 0.00 3.36
48 49 7.222161 AGGAATTTAAAAAGTACTCACGTCCT 58.778 34.615 0.00 0.00 0.00 3.85
49 50 7.387122 AGAGGAATTTAAAAAGTACTCACGTCC 59.613 37.037 15.37 0.00 44.27 4.79
50 51 8.221766 CAGAGGAATTTAAAAAGTACTCACGTC 58.778 37.037 15.37 0.00 44.27 4.34
51 52 7.929785 TCAGAGGAATTTAAAAAGTACTCACGT 59.070 33.333 15.37 0.00 44.27 4.49
52 53 8.306680 TCAGAGGAATTTAAAAAGTACTCACG 57.693 34.615 15.37 7.69 44.27 4.35
70 71 8.690203 TGATTTAACAAAATGTCTTCAGAGGA 57.310 30.769 0.00 0.00 0.00 3.71
71 72 9.918630 ATTGATTTAACAAAATGTCTTCAGAGG 57.081 29.630 0.00 0.00 33.44 3.69
117 118 8.764287 AGCTTAAAAATATGTTTTGCTTGTGAC 58.236 29.630 10.82 0.00 37.59 3.67
118 119 8.885494 AGCTTAAAAATATGTTTTGCTTGTGA 57.115 26.923 10.82 0.00 37.59 3.58
163 779 1.552337 TGTTGACAAGGCAAGGCAAAA 59.448 42.857 0.00 0.00 0.00 2.44
164 780 1.189752 TGTTGACAAGGCAAGGCAAA 58.810 45.000 0.00 0.00 0.00 3.68
165 781 1.189752 TTGTTGACAAGGCAAGGCAA 58.810 45.000 0.00 0.00 0.00 4.52
166 782 1.136695 CTTTGTTGACAAGGCAAGGCA 59.863 47.619 0.00 0.00 37.15 4.75
167 783 1.136891 ACTTTGTTGACAAGGCAAGGC 59.863 47.619 5.97 0.00 36.54 4.35
168 784 2.166254 ACACTTTGTTGACAAGGCAAGG 59.834 45.455 5.97 0.00 36.54 3.61
169 785 3.508744 ACACTTTGTTGACAAGGCAAG 57.491 42.857 5.97 0.00 36.54 4.01
196 812 6.496565 TGAAAAATGTTATGTGGAACCTGGAT 59.503 34.615 0.00 0.00 34.36 3.41
198 814 6.095432 TGAAAAATGTTATGTGGAACCTGG 57.905 37.500 0.00 0.00 34.36 4.45
276 892 8.584063 TTGATTACCTACATACGGCTATGATA 57.416 34.615 9.84 1.32 34.77 2.15
279 895 7.413000 GCATTTGATTACCTACATACGGCTATG 60.413 40.741 0.00 3.42 36.54 2.23
280 896 6.594159 GCATTTGATTACCTACATACGGCTAT 59.406 38.462 0.00 0.00 0.00 2.97
323 944 3.005554 CGAGATGCCATTTGTCAAGACT 58.994 45.455 1.53 0.00 0.00 3.24
325 946 3.333029 TCGAGATGCCATTTGTCAAGA 57.667 42.857 0.00 0.00 0.00 3.02
340 961 3.371285 CAGAGTGACAGTACGAATCGAGA 59.629 47.826 10.55 0.00 0.00 4.04
346 967 2.032290 CGTGACAGAGTGACAGTACGAA 60.032 50.000 0.00 0.00 0.00 3.85
354 975 1.067846 TGGTATGCGTGACAGAGTGAC 60.068 52.381 0.00 0.00 0.00 3.67
359 980 2.443416 ACTACTGGTATGCGTGACAGA 58.557 47.619 15.85 2.72 35.08 3.41
396 1017 2.497675 CAGCTAGCTGTACTCCCTTGAA 59.502 50.000 32.46 0.00 39.10 2.69
398 1019 2.103373 TCAGCTAGCTGTACTCCCTTG 58.897 52.381 36.99 14.68 43.96 3.61
400 1021 1.286553 AGTCAGCTAGCTGTACTCCCT 59.713 52.381 36.99 22.57 43.96 4.20
422 1043 9.297586 CGTACGTATAGCATGGTTCATTATTAT 57.702 33.333 7.22 0.00 0.00 1.28
423 1044 8.513774 TCGTACGTATAGCATGGTTCATTATTA 58.486 33.333 16.05 0.00 0.00 0.98
424 1045 7.327761 GTCGTACGTATAGCATGGTTCATTATT 59.672 37.037 16.05 0.00 0.00 1.40
425 1046 6.805271 GTCGTACGTATAGCATGGTTCATTAT 59.195 38.462 16.05 0.00 0.00 1.28
426 1047 6.144854 GTCGTACGTATAGCATGGTTCATTA 58.855 40.000 16.05 0.00 0.00 1.90
427 1048 4.980434 GTCGTACGTATAGCATGGTTCATT 59.020 41.667 16.05 0.00 0.00 2.57
428 1049 4.037089 TGTCGTACGTATAGCATGGTTCAT 59.963 41.667 16.05 0.00 0.00 2.57
429 1050 3.377798 TGTCGTACGTATAGCATGGTTCA 59.622 43.478 16.05 0.00 0.00 3.18
430 1051 3.956233 TGTCGTACGTATAGCATGGTTC 58.044 45.455 16.05 0.00 0.00 3.62
431 1052 4.374843 TTGTCGTACGTATAGCATGGTT 57.625 40.909 16.05 0.00 0.00 3.67
432 1053 4.579454 ATTGTCGTACGTATAGCATGGT 57.421 40.909 16.05 1.62 0.00 3.55
433 1054 4.979815 TGAATTGTCGTACGTATAGCATGG 59.020 41.667 16.05 0.00 0.00 3.66
434 1055 5.386019 CGTGAATTGTCGTACGTATAGCATG 60.386 44.000 16.05 9.33 0.00 4.06
435 1056 4.673761 CGTGAATTGTCGTACGTATAGCAT 59.326 41.667 16.05 0.00 0.00 3.79
436 1057 4.030366 CGTGAATTGTCGTACGTATAGCA 58.970 43.478 16.05 5.38 0.00 3.49
437 1058 4.031028 ACGTGAATTGTCGTACGTATAGC 58.969 43.478 16.05 2.78 46.50 2.97
445 1066 9.106286 GATATAATTCGTACGTGAATTGTCGTA 57.894 33.333 19.55 10.66 45.56 3.43
446 1067 7.113965 GGATATAATTCGTACGTGAATTGTCGT 59.886 37.037 19.55 9.49 45.56 4.34
447 1068 7.434764 GGATATAATTCGTACGTGAATTGTCG 58.565 38.462 19.55 5.06 45.56 4.35
448 1069 7.324375 TCGGATATAATTCGTACGTGAATTGTC 59.676 37.037 19.55 14.99 45.56 3.18
449 1070 7.140705 TCGGATATAATTCGTACGTGAATTGT 58.859 34.615 19.55 16.46 45.56 2.71
450 1071 7.557036 TCGGATATAATTCGTACGTGAATTG 57.443 36.000 19.55 6.89 45.56 2.32
452 1073 6.750501 CCATCGGATATAATTCGTACGTGAAT 59.249 38.462 16.05 5.74 40.22 2.57
453 1074 6.072563 TCCATCGGATATAATTCGTACGTGAA 60.073 38.462 16.05 3.23 0.00 3.18
454 1075 5.412286 TCCATCGGATATAATTCGTACGTGA 59.588 40.000 16.05 5.85 0.00 4.35
455 1076 5.633927 TCCATCGGATATAATTCGTACGTG 58.366 41.667 16.05 0.87 0.00 4.49
456 1077 5.675575 GCTCCATCGGATATAATTCGTACGT 60.676 44.000 16.05 0.00 0.00 3.57
457 1078 4.733887 GCTCCATCGGATATAATTCGTACG 59.266 45.833 9.53 9.53 0.00 3.67
458 1079 5.647589 TGCTCCATCGGATATAATTCGTAC 58.352 41.667 0.00 0.00 0.00 3.67
459 1080 5.650703 TCTGCTCCATCGGATATAATTCGTA 59.349 40.000 0.00 0.00 0.00 3.43
460 1081 4.462834 TCTGCTCCATCGGATATAATTCGT 59.537 41.667 0.00 0.00 0.00 3.85
461 1082 4.998788 TCTGCTCCATCGGATATAATTCG 58.001 43.478 0.00 0.00 0.00 3.34
462 1083 6.577103 TGATCTGCTCCATCGGATATAATTC 58.423 40.000 0.00 0.00 32.52 2.17
463 1084 6.550938 TGATCTGCTCCATCGGATATAATT 57.449 37.500 0.00 0.00 32.52 1.40
464 1085 6.344500 GTTGATCTGCTCCATCGGATATAAT 58.656 40.000 0.00 0.00 32.52 1.28
465 1086 5.337571 GGTTGATCTGCTCCATCGGATATAA 60.338 44.000 0.00 0.00 32.52 0.98
466 1087 4.160439 GGTTGATCTGCTCCATCGGATATA 59.840 45.833 0.00 0.00 32.52 0.86
467 1088 3.055530 GGTTGATCTGCTCCATCGGATAT 60.056 47.826 0.00 0.00 32.52 1.63
468 1089 2.300152 GGTTGATCTGCTCCATCGGATA 59.700 50.000 0.00 0.00 32.52 2.59
469 1090 1.071385 GGTTGATCTGCTCCATCGGAT 59.929 52.381 0.00 0.00 34.92 4.18
470 1091 0.465705 GGTTGATCTGCTCCATCGGA 59.534 55.000 0.00 0.00 0.00 4.55
471 1092 0.533755 GGGTTGATCTGCTCCATCGG 60.534 60.000 0.00 0.00 0.00 4.18
472 1093 0.877649 CGGGTTGATCTGCTCCATCG 60.878 60.000 0.00 0.00 0.00 3.84
473 1094 0.179000 ACGGGTTGATCTGCTCCATC 59.821 55.000 0.00 0.00 0.00 3.51
474 1095 1.496060 TACGGGTTGATCTGCTCCAT 58.504 50.000 0.00 0.00 0.00 3.41
475 1096 1.496060 ATACGGGTTGATCTGCTCCA 58.504 50.000 0.00 0.00 0.00 3.86
476 1097 3.258372 TGATATACGGGTTGATCTGCTCC 59.742 47.826 0.00 0.00 0.00 4.70
477 1098 4.021894 ACTGATATACGGGTTGATCTGCTC 60.022 45.833 0.00 0.00 0.00 4.26
478 1099 3.898123 ACTGATATACGGGTTGATCTGCT 59.102 43.478 0.00 0.00 0.00 4.24
479 1100 4.258702 ACTGATATACGGGTTGATCTGC 57.741 45.455 0.00 0.00 0.00 4.26
480 1101 4.991056 CCAACTGATATACGGGTTGATCTG 59.009 45.833 12.29 0.00 40.74 2.90
481 1102 4.899457 TCCAACTGATATACGGGTTGATCT 59.101 41.667 12.29 0.00 40.74 2.75
482 1103 4.989168 GTCCAACTGATATACGGGTTGATC 59.011 45.833 12.29 0.00 40.74 2.92
483 1104 4.654262 AGTCCAACTGATATACGGGTTGAT 59.346 41.667 12.29 0.74 40.74 2.57
484 1105 4.028131 AGTCCAACTGATATACGGGTTGA 58.972 43.478 12.29 0.00 40.74 3.18
485 1106 4.099573 AGAGTCCAACTGATATACGGGTTG 59.900 45.833 0.00 0.00 38.80 3.77
486 1107 4.287552 AGAGTCCAACTGATATACGGGTT 58.712 43.478 0.00 0.00 0.00 4.11
487 1108 3.912248 AGAGTCCAACTGATATACGGGT 58.088 45.455 0.00 0.00 0.00 5.28
488 1109 5.535406 ACTTAGAGTCCAACTGATATACGGG 59.465 44.000 0.00 0.00 0.00 5.28
489 1110 6.636562 ACTTAGAGTCCAACTGATATACGG 57.363 41.667 0.00 0.00 0.00 4.02
503 1124 1.997669 CCGTTGCTGGACTTAGAGTC 58.002 55.000 0.00 0.00 44.32 3.36
504 1125 0.037232 GCCGTTGCTGGACTTAGAGT 60.037 55.000 0.00 0.00 33.53 3.24
505 1126 2.755929 GCCGTTGCTGGACTTAGAG 58.244 57.895 0.00 0.00 33.53 2.43
517 1138 0.179156 GATGCAACATCCAGCCGTTG 60.179 55.000 0.00 0.00 44.26 4.10
518 1139 1.647545 CGATGCAACATCCAGCCGTT 61.648 55.000 0.00 0.00 0.00 4.44
519 1140 2.108514 CGATGCAACATCCAGCCGT 61.109 57.895 0.00 0.00 0.00 5.68
520 1141 0.809636 TACGATGCAACATCCAGCCG 60.810 55.000 0.00 0.00 0.00 5.52
521 1142 0.657840 GTACGATGCAACATCCAGCC 59.342 55.000 0.00 0.00 0.00 4.85
522 1143 0.657840 GGTACGATGCAACATCCAGC 59.342 55.000 0.00 0.00 0.00 4.85
523 1144 2.022764 TGGTACGATGCAACATCCAG 57.977 50.000 0.00 0.00 0.00 3.86
524 1145 2.481289 TTGGTACGATGCAACATCCA 57.519 45.000 0.00 0.00 0.00 3.41
525 1146 3.546020 CGATTTGGTACGATGCAACATCC 60.546 47.826 0.00 0.00 0.00 3.51
526 1147 3.546020 CCGATTTGGTACGATGCAACATC 60.546 47.826 0.00 0.00 0.00 3.06
527 1148 2.354510 CCGATTTGGTACGATGCAACAT 59.645 45.455 0.00 0.00 0.00 2.71
528 1149 1.735018 CCGATTTGGTACGATGCAACA 59.265 47.619 0.00 0.00 0.00 3.33
529 1150 2.004017 TCCGATTTGGTACGATGCAAC 58.996 47.619 0.00 0.00 39.52 4.17
530 1151 2.004017 GTCCGATTTGGTACGATGCAA 58.996 47.619 0.00 0.00 39.52 4.08
531 1152 1.066787 TGTCCGATTTGGTACGATGCA 60.067 47.619 0.00 0.00 39.52 3.96
532 1153 1.647346 TGTCCGATTTGGTACGATGC 58.353 50.000 0.00 0.00 39.52 3.91
533 1154 3.259064 ACTTGTCCGATTTGGTACGATG 58.741 45.455 0.00 0.00 39.52 3.84
534 1155 3.056393 TGACTTGTCCGATTTGGTACGAT 60.056 43.478 0.00 0.00 39.52 3.73
535 1156 2.296752 TGACTTGTCCGATTTGGTACGA 59.703 45.455 0.00 0.00 39.52 3.43
536 1157 2.679450 TGACTTGTCCGATTTGGTACG 58.321 47.619 0.00 0.00 39.52 3.67
537 1158 4.000988 ACATGACTTGTCCGATTTGGTAC 58.999 43.478 0.00 0.00 39.52 3.34
538 1159 4.280436 ACATGACTTGTCCGATTTGGTA 57.720 40.909 0.00 0.00 39.52 3.25
539 1160 3.140325 ACATGACTTGTCCGATTTGGT 57.860 42.857 0.00 0.00 39.52 3.67
540 1161 3.424829 CGAACATGACTTGTCCGATTTGG 60.425 47.826 0.00 0.00 37.68 3.28
541 1162 3.186409 ACGAACATGACTTGTCCGATTTG 59.814 43.478 7.10 0.00 37.68 2.32
542 1163 3.399330 ACGAACATGACTTGTCCGATTT 58.601 40.909 7.10 0.00 37.68 2.17
543 1164 3.040147 ACGAACATGACTTGTCCGATT 57.960 42.857 7.10 0.00 37.68 3.34
544 1165 2.743636 ACGAACATGACTTGTCCGAT 57.256 45.000 7.10 0.00 37.68 4.18
545 1166 2.666344 CGTACGAACATGACTTGTCCGA 60.666 50.000 10.44 0.00 37.68 4.55
546 1167 1.647213 CGTACGAACATGACTTGTCCG 59.353 52.381 10.44 0.00 37.68 4.79
547 1168 2.407361 CACGTACGAACATGACTTGTCC 59.593 50.000 24.41 0.00 37.68 4.02
548 1169 3.047796 ACACGTACGAACATGACTTGTC 58.952 45.455 24.41 0.00 37.68 3.18
549 1170 3.088194 ACACGTACGAACATGACTTGT 57.912 42.857 24.41 9.44 41.53 3.16
550 1171 4.224433 ACTACACGTACGAACATGACTTG 58.776 43.478 24.41 8.74 0.00 3.16
551 1172 4.494350 ACTACACGTACGAACATGACTT 57.506 40.909 24.41 0.00 0.00 3.01
552 1173 4.692625 ACTACTACACGTACGAACATGACT 59.307 41.667 24.41 0.00 0.00 3.41
553 1174 4.962693 ACTACTACACGTACGAACATGAC 58.037 43.478 24.41 0.00 0.00 3.06
554 1175 5.611796 AACTACTACACGTACGAACATGA 57.388 39.130 24.41 1.89 0.00 3.07
555 1176 5.001912 CGAAACTACTACACGTACGAACATG 59.998 44.000 24.41 12.28 0.00 3.21
556 1177 5.082059 CGAAACTACTACACGTACGAACAT 58.918 41.667 24.41 6.42 0.00 2.71
557 1178 4.210328 TCGAAACTACTACACGTACGAACA 59.790 41.667 24.41 4.77 0.00 3.18
558 1179 4.698276 TCGAAACTACTACACGTACGAAC 58.302 43.478 24.41 0.00 0.00 3.95
559 1180 4.983215 TCGAAACTACTACACGTACGAA 57.017 40.909 24.41 5.91 0.00 3.85
560 1181 4.983215 TTCGAAACTACTACACGTACGA 57.017 40.909 24.41 0.00 0.00 3.43
561 1182 7.883073 ATTATTCGAAACTACTACACGTACG 57.117 36.000 15.01 15.01 0.00 3.67
565 1186 9.564041 GCAATTATTATTCGAAACTACTACACG 57.436 33.333 0.00 0.00 0.00 4.49
570 1191 8.122952 GCACTGCAATTATTATTCGAAACTACT 58.877 33.333 0.00 0.00 0.00 2.57
571 1192 8.122952 AGCACTGCAATTATTATTCGAAACTAC 58.877 33.333 0.00 0.00 0.00 2.73
572 1193 8.208718 AGCACTGCAATTATTATTCGAAACTA 57.791 30.769 0.00 0.00 0.00 2.24
573 1194 7.088589 AGCACTGCAATTATTATTCGAAACT 57.911 32.000 0.00 0.00 0.00 2.66
574 1195 7.740519 AAGCACTGCAATTATTATTCGAAAC 57.259 32.000 0.00 0.00 0.00 2.78
575 1196 9.284594 GTTAAGCACTGCAATTATTATTCGAAA 57.715 29.630 0.00 0.00 0.00 3.46
576 1197 8.673711 AGTTAAGCACTGCAATTATTATTCGAA 58.326 29.630 0.00 0.00 32.83 3.71
577 1198 8.122330 CAGTTAAGCACTGCAATTATTATTCGA 58.878 33.333 3.30 0.00 46.70 3.71
578 1199 8.261628 CAGTTAAGCACTGCAATTATTATTCG 57.738 34.615 3.30 0.00 46.70 3.34
596 1217 4.320202 CCACCACGGAAATGTTCAGTTAAG 60.320 45.833 0.00 0.00 35.91 1.85
646 1267 2.813779 GCTAACAAAGCGATGGTCAG 57.186 50.000 0.00 0.00 42.53 3.51
657 1278 0.042013 CGTCGCGGTTTGCTAACAAA 60.042 50.000 6.13 0.00 43.45 2.83
658 1279 1.565591 CGTCGCGGTTTGCTAACAA 59.434 52.632 6.13 0.00 43.27 2.83
661 1282 3.416382 GGCGTCGCGGTTTGCTAA 61.416 61.111 11.75 0.00 43.27 3.09
662 1283 3.943479 ATGGCGTCGCGGTTTGCTA 62.943 57.895 11.75 3.62 43.27 3.49
664 1285 4.398598 AATGGCGTCGCGGTTTGC 62.399 61.111 11.75 5.17 41.47 3.68
665 1286 2.501650 CAATGGCGTCGCGGTTTG 60.502 61.111 11.75 10.62 0.00 2.93
666 1287 3.732892 CCAATGGCGTCGCGGTTT 61.733 61.111 11.75 1.55 0.00 3.27
703 1324 4.000988 GCCCTGACAAGTAAAGAAATCGA 58.999 43.478 0.00 0.00 0.00 3.59
707 1328 1.877443 GCGCCCTGACAAGTAAAGAAA 59.123 47.619 0.00 0.00 0.00 2.52
714 1335 4.021925 GGAGGCGCCCTGACAAGT 62.022 66.667 26.15 0.00 31.76 3.16
726 1347 4.933064 CGGCGAGACGATGGAGGC 62.933 72.222 0.00 0.00 35.47 4.70
728 1349 2.278206 CACGGCGAGACGATGGAG 60.278 66.667 16.62 0.00 37.61 3.86
730 1351 2.579787 GACACGGCGAGACGATGG 60.580 66.667 16.62 0.00 37.61 3.51
818 1442 2.126888 GCAATGCGTGGTCCGTTG 60.127 61.111 0.00 0.00 39.32 4.10
848 1472 2.749044 CACGCTCTGGCCTTGCAT 60.749 61.111 3.32 0.00 34.44 3.96
866 1496 1.000884 TCGCTTTTTATACGCACGGG 58.999 50.000 0.00 0.00 0.00 5.28
895 1525 6.578023 AGGATGCTCTGTTCTGAAATAGTAC 58.422 40.000 0.00 0.00 0.00 2.73
896 1526 6.460261 CGAGGATGCTCTGTTCTGAAATAGTA 60.460 42.308 12.78 0.00 0.00 1.82
897 1527 5.669477 GAGGATGCTCTGTTCTGAAATAGT 58.331 41.667 7.03 0.00 0.00 2.12
898 1528 4.744137 CGAGGATGCTCTGTTCTGAAATAG 59.256 45.833 12.78 0.00 0.00 1.73
899 1529 4.160439 ACGAGGATGCTCTGTTCTGAAATA 59.840 41.667 12.78 0.00 0.00 1.40
900 1530 3.055530 ACGAGGATGCTCTGTTCTGAAAT 60.056 43.478 12.78 0.00 0.00 2.17
901 1531 2.300152 ACGAGGATGCTCTGTTCTGAAA 59.700 45.455 12.78 0.00 0.00 2.69
902 1532 1.895798 ACGAGGATGCTCTGTTCTGAA 59.104 47.619 12.78 0.00 0.00 3.02
903 1533 1.203287 CACGAGGATGCTCTGTTCTGA 59.797 52.381 12.78 0.00 0.00 3.27
930 1577 4.460683 GTGGCCGGCGATGGTGTA 62.461 66.667 22.54 0.00 0.00 2.90
942 1589 3.071206 TGGAGCTCTCGAGTGGCC 61.071 66.667 22.18 15.64 0.00 5.36
954 1601 4.940593 CTAGAGCGCGCCTGGAGC 62.941 72.222 30.33 12.80 42.39 4.70
955 1602 4.277593 CCTAGAGCGCGCCTGGAG 62.278 72.222 30.33 19.36 0.00 3.86
982 1629 2.536997 ATTGTCACCGCCACCCTAGC 62.537 60.000 0.00 0.00 0.00 3.42
983 1630 0.744414 CATTGTCACCGCCACCCTAG 60.744 60.000 0.00 0.00 0.00 3.02
984 1631 1.298340 CATTGTCACCGCCACCCTA 59.702 57.895 0.00 0.00 0.00 3.53
985 1632 2.034066 CATTGTCACCGCCACCCT 59.966 61.111 0.00 0.00 0.00 4.34
986 1633 3.061848 CCATTGTCACCGCCACCC 61.062 66.667 0.00 0.00 0.00 4.61
987 1634 3.747976 GCCATTGTCACCGCCACC 61.748 66.667 0.00 0.00 0.00 4.61
1081 1728 2.056223 GCTCGTAGTACCCCTGCCA 61.056 63.158 0.00 0.00 0.00 4.92
1246 1907 4.256090 GCATTGCCATCGCCGTCC 62.256 66.667 0.00 0.00 0.00 4.79
1273 1934 0.384230 ATTCAGAACAAACACGCGCG 60.384 50.000 30.96 30.96 0.00 6.86
1291 1952 0.395686 CCATGCCGACTGATCAGGAT 59.604 55.000 26.08 6.61 0.00 3.24
1369 2030 4.117661 GTCGCGTCCTTCTCGGCT 62.118 66.667 5.77 0.00 0.00 5.52
1787 2505 2.046023 TCGGCCACTGATGCTTGG 60.046 61.111 2.24 0.00 35.81 3.61
1916 3716 3.181495 ACGAATCTAGCAAGTTCCTCTCG 60.181 47.826 0.00 0.00 0.00 4.04
2063 5442 1.098050 GAGCCATCCGTTTCAGCAAT 58.902 50.000 0.00 0.00 0.00 3.56
2135 5517 1.134965 CGGTTGGTGCTTTTGTGGAAA 60.135 47.619 0.00 0.00 0.00 3.13
2201 5851 5.128663 TGCATAGCCCTATTATTGCTATCGA 59.871 40.000 0.00 0.00 44.30 3.59
2203 5853 7.284034 ACAATGCATAGCCCTATTATTGCTATC 59.716 37.037 0.00 0.00 44.30 2.08
2243 5896 5.297547 CAGTGCAACAACCTTTCTAGTCTA 58.702 41.667 0.00 0.00 41.43 2.59
2275 5933 5.452777 AGCAACTTAGCGTTTCAAAATCTC 58.547 37.500 0.00 0.00 40.15 2.75
2280 5938 5.744666 AGTTAGCAACTTAGCGTTTCAAA 57.255 34.783 0.00 0.00 39.04 2.69
2311 5969 5.959618 AGACAAAAATTTAGGAACCGGAG 57.040 39.130 9.46 0.00 0.00 4.63
2312 5970 6.718522 AAAGACAAAAATTTAGGAACCGGA 57.281 33.333 9.46 0.00 0.00 5.14
2313 5971 8.874744 TTAAAAGACAAAAATTTAGGAACCGG 57.125 30.769 0.00 0.00 0.00 5.28
2388 6046 6.888430 ACGAAACAAATGAGTGAATCTACAC 58.112 36.000 0.00 0.00 40.60 2.90
2389 6047 8.655970 CATACGAAACAAATGAGTGAATCTACA 58.344 33.333 0.00 0.00 0.00 2.74
2390 6048 8.656849 ACATACGAAACAAATGAGTGAATCTAC 58.343 33.333 0.00 0.00 0.00 2.59
2391 6049 8.771920 ACATACGAAACAAATGAGTGAATCTA 57.228 30.769 0.00 0.00 0.00 1.98
2392 6050 7.672983 ACATACGAAACAAATGAGTGAATCT 57.327 32.000 0.00 0.00 0.00 2.40
2393 6051 8.656849 ACTACATACGAAACAAATGAGTGAATC 58.343 33.333 0.00 0.00 0.00 2.52
2394 6052 8.547967 ACTACATACGAAACAAATGAGTGAAT 57.452 30.769 0.00 0.00 0.00 2.57
2395 6053 7.654116 TGACTACATACGAAACAAATGAGTGAA 59.346 33.333 0.00 0.00 0.00 3.18
2396 6054 7.115805 GTGACTACATACGAAACAAATGAGTGA 59.884 37.037 0.00 0.00 0.00 3.41
2397 6055 7.116376 AGTGACTACATACGAAACAAATGAGTG 59.884 37.037 0.00 0.00 0.00 3.51
2398 6056 7.152645 AGTGACTACATACGAAACAAATGAGT 58.847 34.615 0.00 0.00 0.00 3.41
2399 6057 7.582435 AGTGACTACATACGAAACAAATGAG 57.418 36.000 0.00 0.00 0.00 2.90
2400 6058 7.439955 ACAAGTGACTACATACGAAACAAATGA 59.560 33.333 0.00 0.00 0.00 2.57
2401 6059 7.572759 ACAAGTGACTACATACGAAACAAATG 58.427 34.615 0.00 0.00 0.00 2.32
2402 6060 7.724305 ACAAGTGACTACATACGAAACAAAT 57.276 32.000 0.00 0.00 0.00 2.32
2403 6061 7.278203 TCAACAAGTGACTACATACGAAACAAA 59.722 33.333 0.00 0.00 0.00 2.83
2404 6062 6.757478 TCAACAAGTGACTACATACGAAACAA 59.243 34.615 0.00 0.00 0.00 2.83
2405 6063 6.274579 TCAACAAGTGACTACATACGAAACA 58.725 36.000 0.00 0.00 0.00 2.83
2406 6064 6.758593 TCAACAAGTGACTACATACGAAAC 57.241 37.500 0.00 0.00 0.00 2.78
2407 6065 7.773864 TTTCAACAAGTGACTACATACGAAA 57.226 32.000 0.00 0.00 35.39 3.46
2408 6066 7.870954 AGATTTCAACAAGTGACTACATACGAA 59.129 33.333 0.00 0.00 35.39 3.85
2409 6067 7.375834 AGATTTCAACAAGTGACTACATACGA 58.624 34.615 0.00 0.00 35.39 3.43
2410 6068 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
2411 6069 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
2413 6071 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
2414 6072 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
2415 6073 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
2416 6074 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
2417 6075 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
2418 6076 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
2419 6077 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
2420 6078 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
2421 6079 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
2424 6082 9.342308 ACATTTGTCTTTCTAGAGATTTCAACA 57.658 29.630 0.00 0.00 0.00 3.33
2432 6090 9.490379 GTTCCTAAACATTTGTCTTTCTAGAGA 57.510 33.333 0.00 0.00 35.36 3.10
2433 6091 8.436200 CGTTCCTAAACATTTGTCTTTCTAGAG 58.564 37.037 0.00 0.00 34.93 2.43
2434 6092 7.386848 CCGTTCCTAAACATTTGTCTTTCTAGA 59.613 37.037 0.00 0.00 34.93 2.43
2435 6093 7.386848 TCCGTTCCTAAACATTTGTCTTTCTAG 59.613 37.037 0.00 0.00 34.93 2.43
2436 6094 7.218614 TCCGTTCCTAAACATTTGTCTTTCTA 58.781 34.615 0.00 0.00 34.93 2.10
2437 6095 6.059484 TCCGTTCCTAAACATTTGTCTTTCT 58.941 36.000 0.00 0.00 34.93 2.52
2438 6096 6.308371 TCCGTTCCTAAACATTTGTCTTTC 57.692 37.500 0.00 0.00 34.93 2.62
2439 6097 6.488683 TCATCCGTTCCTAAACATTTGTCTTT 59.511 34.615 0.00 0.00 34.93 2.52
2440 6098 6.001460 TCATCCGTTCCTAAACATTTGTCTT 58.999 36.000 0.00 0.00 34.93 3.01
2441 6099 5.556915 TCATCCGTTCCTAAACATTTGTCT 58.443 37.500 0.00 0.00 34.93 3.41
2442 6100 5.873179 TCATCCGTTCCTAAACATTTGTC 57.127 39.130 0.00 0.00 34.93 3.18
2443 6101 5.768164 ACTTCATCCGTTCCTAAACATTTGT 59.232 36.000 0.00 0.00 34.93 2.83
2444 6102 6.254281 ACTTCATCCGTTCCTAAACATTTG 57.746 37.500 0.00 0.00 34.93 2.32
2445 6103 7.166167 AGTACTTCATCCGTTCCTAAACATTT 58.834 34.615 0.00 0.00 34.93 2.32
2446 6104 6.708285 AGTACTTCATCCGTTCCTAAACATT 58.292 36.000 0.00 0.00 34.93 2.71
2447 6105 6.295719 AGTACTTCATCCGTTCCTAAACAT 57.704 37.500 0.00 0.00 34.93 2.71
2448 6106 5.733620 AGTACTTCATCCGTTCCTAAACA 57.266 39.130 0.00 0.00 34.93 2.83
2449 6107 6.624423 TGTAGTACTTCATCCGTTCCTAAAC 58.376 40.000 0.00 0.00 0.00 2.01
2450 6108 6.839124 TGTAGTACTTCATCCGTTCCTAAA 57.161 37.500 0.00 0.00 0.00 1.85
2451 6109 8.701908 ATATGTAGTACTTCATCCGTTCCTAA 57.298 34.615 17.20 0.00 0.00 2.69
2452 6110 9.970553 ATATATGTAGTACTTCATCCGTTCCTA 57.029 33.333 17.20 0.00 0.00 2.94
2453 6111 8.880991 ATATATGTAGTACTTCATCCGTTCCT 57.119 34.615 17.20 0.00 0.00 3.36
2454 6112 9.924650 AAATATATGTAGTACTTCATCCGTTCC 57.075 33.333 17.20 0.00 0.00 3.62
2483 6141 4.002982 CAGTCATGTCCGAGAATTCCAAA 58.997 43.478 0.65 0.00 0.00 3.28
2492 6150 2.492019 TTATCGCAGTCATGTCCGAG 57.508 50.000 0.00 0.00 32.86 4.63
2586 6256 7.494625 CCTTGTCGGTTCATGTGTACTTATATT 59.505 37.037 0.00 0.00 0.00 1.28
2706 6376 0.870393 ACATCAGAACAGCTTGCACG 59.130 50.000 0.00 0.00 0.00 5.34
2708 6378 4.080919 AGGTATACATCAGAACAGCTTGCA 60.081 41.667 5.01 0.00 0.00 4.08
2713 6383 7.942990 AGTTAGTAGGTATACATCAGAACAGC 58.057 38.462 5.01 0.00 34.07 4.40
2735 6405 6.210784 TGGTTAGTAGACAGACAGCAATAGTT 59.789 38.462 0.00 0.00 0.00 2.24
2741 6411 3.227614 TGTGGTTAGTAGACAGACAGCA 58.772 45.455 0.00 0.00 0.00 4.41
2771 6441 9.444600 GTGTCAATCTAAACTGGTAGGAATTAA 57.555 33.333 0.00 0.00 0.00 1.40
2780 6450 4.974645 TGAGGTGTCAATCTAAACTGGT 57.025 40.909 0.00 0.00 0.00 4.00
2912 6585 7.228507 ACACATTATAACAAGTGCAGAACTCAA 59.771 33.333 12.10 0.00 38.56 3.02
2975 6686 1.074775 GATGGTGTGTGCCCCTGAA 59.925 57.895 0.00 0.00 0.00 3.02
3002 6713 0.532862 CGGTGAAGGAGTTGCAGTGT 60.533 55.000 0.00 0.00 0.00 3.55
3105 6816 2.111043 CGTGGTGCACTTGGTCCT 59.889 61.111 17.98 0.00 31.34 3.85
3194 6905 2.577059 CGACGCTTTAGGAGGCCA 59.423 61.111 5.01 0.00 0.00 5.36
3209 6920 4.436368 GACTGGAAGAGTCCCCGA 57.564 61.111 0.00 0.00 44.95 5.14
3487 7219 7.284919 ACCACCTTACAAACAAGGAAAATAG 57.715 36.000 8.83 0.00 46.94 1.73
3495 7227 6.394809 ACTTGAAAACCACCTTACAAACAAG 58.605 36.000 0.00 0.00 37.56 3.16
3498 7230 6.090223 CACAACTTGAAAACCACCTTACAAAC 59.910 38.462 0.00 0.00 0.00 2.93
3516 7253 2.103432 TGTATCACGTGGACCACAACTT 59.897 45.455 24.18 8.64 33.40 2.66
3521 7258 2.094182 AGACATGTATCACGTGGACCAC 60.094 50.000 17.00 15.13 39.36 4.16
3529 7266 9.694520 CAAAATAGAAAGAAGACATGTATCACG 57.305 33.333 0.00 0.00 0.00 4.35
3631 7529 5.633830 AAATCCAGTGACATCAACATCAC 57.366 39.130 0.00 0.00 44.64 3.06
3740 7641 6.411376 TGGTGGTTCATATACCTTGTTGTAG 58.589 40.000 0.00 0.00 39.04 2.74
3745 7646 4.698304 CGTTTGGTGGTTCATATACCTTGT 59.302 41.667 0.00 0.00 39.04 3.16
3764 7665 1.933115 GATGGCGGCAATGGTCGTTT 61.933 55.000 18.31 0.00 45.79 3.60
3789 7690 2.492484 ACAGAGCTCCGACGTAGATTTT 59.508 45.455 10.93 0.00 0.00 1.82
3790 7691 2.093106 ACAGAGCTCCGACGTAGATTT 58.907 47.619 10.93 0.00 0.00 2.17
3797 7698 1.002251 GGATTAGACAGAGCTCCGACG 60.002 57.143 10.93 0.00 0.00 5.12
3826 7727 0.765510 GACCCACCTCAAGTTCACCT 59.234 55.000 0.00 0.00 0.00 4.00
3852 7753 5.992217 GCTTCTTCTTTCAGTTAGTCTTCCA 59.008 40.000 0.00 0.00 0.00 3.53
3865 7766 4.754114 ACAGATGACAGTGCTTCTTCTTTC 59.246 41.667 0.00 0.00 0.00 2.62
3866 7767 4.712476 ACAGATGACAGTGCTTCTTCTTT 58.288 39.130 0.00 0.00 0.00 2.52
3879 7782 0.671472 CAGCGCTTGGACAGATGACA 60.671 55.000 7.50 0.00 0.00 3.58
3880 7783 1.975363 GCAGCGCTTGGACAGATGAC 61.975 60.000 7.50 0.00 0.00 3.06
3900 7803 0.392595 GGGTTTTAGTCCTCGCAGGG 60.393 60.000 2.86 0.00 35.59 4.45
3920 7823 4.102838 TCGGCTCTGACTAGTAGATAGGTT 59.897 45.833 3.59 0.00 35.63 3.50
3934 7837 2.922503 TTGGTGCCTCGGCTCTGA 60.923 61.111 9.65 0.00 42.51 3.27
3940 7843 2.190578 GGGATCTTGGTGCCTCGG 59.809 66.667 0.00 0.00 0.00 4.63
3985 7888 0.249363 GATTCGTCTCCCTTACGCCC 60.249 60.000 0.00 0.00 40.12 6.13
4013 7916 3.382865 TCTCACCTTGATCTTCTCCGATG 59.617 47.826 0.00 0.00 0.00 3.84
4014 7917 3.636679 TCTCACCTTGATCTTCTCCGAT 58.363 45.455 0.00 0.00 0.00 4.18
4015 7918 3.087370 TCTCACCTTGATCTTCTCCGA 57.913 47.619 0.00 0.00 0.00 4.55
4040 7943 2.737252 GTCACAAGGCGACTAGGAAAAG 59.263 50.000 0.00 0.00 42.68 2.27
4044 7947 0.888619 CTGTCACAAGGCGACTAGGA 59.111 55.000 0.00 0.00 42.68 2.94
4052 7955 0.110486 TCTTTCCCCTGTCACAAGGC 59.890 55.000 0.00 0.00 35.85 4.35
4058 7961 3.976015 ACACTTTTTCTTTCCCCTGTCA 58.024 40.909 0.00 0.00 0.00 3.58
4063 7966 2.863740 CGCAAACACTTTTTCTTTCCCC 59.136 45.455 0.00 0.00 0.00 4.81
4072 7975 2.096248 TGGTTCTCCGCAAACACTTTT 58.904 42.857 0.00 0.00 36.30 2.27
4074 7977 1.021968 GTGGTTCTCCGCAAACACTT 58.978 50.000 0.00 0.00 40.33 3.16
4095 7998 6.319658 CAGCTGATACAGGTTACAAATCCATT 59.680 38.462 8.42 0.00 40.40 3.16
4104 8007 3.887621 TGTCCAGCTGATACAGGTTAC 57.112 47.619 17.39 4.11 40.40 2.50
4136 8039 2.949644 GTTTGCTGGTGGAGTAGTGTTT 59.050 45.455 0.00 0.00 0.00 2.83
4141 8044 3.695830 TTAGGTTTGCTGGTGGAGTAG 57.304 47.619 0.00 0.00 0.00 2.57
4147 8050 2.028130 TGGTGTTTAGGTTTGCTGGTG 58.972 47.619 0.00 0.00 0.00 4.17
4196 8099 4.697828 TCGCAATGGATGTAAGCTTAACAA 59.302 37.500 7.99 0.00 0.00 2.83
4219 8122 8.974060 TTCCTGTTAAAAATAAGTGTCAGAGT 57.026 30.769 0.00 0.00 0.00 3.24
4278 8182 2.621668 GGAGGGGAAATGTTGGAGAAGG 60.622 54.545 0.00 0.00 0.00 3.46
4297 8201 3.307199 GGACATTTAAAGGAGACGTGGGA 60.307 47.826 6.90 0.00 0.00 4.37
4299 8203 3.670625 TGGACATTTAAAGGAGACGTGG 58.329 45.455 6.90 0.00 0.00 4.94
4301 8205 9.847224 ATTAATATGGACATTTAAAGGAGACGT 57.153 29.630 6.90 0.00 0.00 4.34
4312 8218 9.253832 TGGTTTGAGTGATTAATATGGACATTT 57.746 29.630 0.00 0.00 0.00 2.32
4316 8222 7.336931 AGTGTGGTTTGAGTGATTAATATGGAC 59.663 37.037 0.00 0.00 0.00 4.02
4333 8239 4.924305 TCGAGTAACTGTAGTGTGGTTT 57.076 40.909 0.00 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.