Multiple sequence alignment - TraesCS7D01G442000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G442000 chr7D 100.000 2282 0 0 1 2282 561525195 561522914 0.000000e+00 4215.0
1 TraesCS7D01G442000 chr7D 94.725 1725 81 5 1 1718 174132000 174133721 0.000000e+00 2673.0
2 TraesCS7D01G442000 chr7D 94.454 1731 75 6 1 1718 433075928 433077650 0.000000e+00 2645.0
3 TraesCS7D01G442000 chr7D 94.596 1684 76 8 47 1721 188556088 188554411 0.000000e+00 2591.0
4 TraesCS7D01G442000 chr3D 95.428 1728 53 11 12 1725 95959212 95957497 0.000000e+00 2730.0
5 TraesCS7D01G442000 chr3D 94.902 1726 73 9 1 1718 93188045 93189763 0.000000e+00 2686.0
6 TraesCS7D01G442000 chr4D 94.838 1724 76 4 1 1718 15240431 15238715 0.000000e+00 2678.0
7 TraesCS7D01G442000 chr4D 93.623 1725 97 5 1 1718 490089244 490087526 0.000000e+00 2564.0
8 TraesCS7D01G442000 chr1B 94.084 1724 90 8 1 1717 584461655 584459937 0.000000e+00 2608.0
9 TraesCS7D01G442000 chr4A 92.990 1726 102 10 1 1718 629502174 629503888 0.000000e+00 2499.0
10 TraesCS7D01G442000 chr4A 82.119 151 26 1 1833 1983 707018444 707018295 6.620000e-26 128.0
11 TraesCS7D01G442000 chr7B 89.103 156 14 3 2125 2278 609749582 609749428 8.320000e-45 191.0
12 TraesCS7D01G442000 chr3A 89.796 147 14 1 1847 1992 451660380 451660234 1.080000e-43 187.0
13 TraesCS7D01G442000 chr3A 89.796 147 14 1 1847 1992 451662645 451662791 1.080000e-43 187.0
14 TraesCS7D01G442000 chr3A 88.435 147 15 2 1847 1992 259840484 259840339 2.330000e-40 176.0
15 TraesCS7D01G442000 chr5A 89.116 147 15 1 1847 1992 525736277 525736131 5.010000e-42 182.0
16 TraesCS7D01G442000 chr3B 88.435 147 16 1 1847 1992 703850334 703850188 2.330000e-40 176.0
17 TraesCS7D01G442000 chr2B 84.828 145 22 0 1837 1981 245222307 245222163 1.830000e-31 147.0
18 TraesCS7D01G442000 chr2B 82.667 150 25 1 1834 1983 676124942 676124794 5.120000e-27 132.0
19 TraesCS7D01G442000 chr4B 82.667 150 25 1 1834 1983 657262451 657262303 5.120000e-27 132.0
20 TraesCS7D01G442000 chr6D 96.078 51 2 0 1725 1775 100753588 100753638 1.450000e-12 84.2
21 TraesCS7D01G442000 chr6A 94.737 38 0 2 1742 1779 30727251 30727286 8.800000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G442000 chr7D 561522914 561525195 2281 True 4215 4215 100.000 1 2282 1 chr7D.!!$R2 2281
1 TraesCS7D01G442000 chr7D 174132000 174133721 1721 False 2673 2673 94.725 1 1718 1 chr7D.!!$F1 1717
2 TraesCS7D01G442000 chr7D 433075928 433077650 1722 False 2645 2645 94.454 1 1718 1 chr7D.!!$F2 1717
3 TraesCS7D01G442000 chr7D 188554411 188556088 1677 True 2591 2591 94.596 47 1721 1 chr7D.!!$R1 1674
4 TraesCS7D01G442000 chr3D 95957497 95959212 1715 True 2730 2730 95.428 12 1725 1 chr3D.!!$R1 1713
5 TraesCS7D01G442000 chr3D 93188045 93189763 1718 False 2686 2686 94.902 1 1718 1 chr3D.!!$F1 1717
6 TraesCS7D01G442000 chr4D 15238715 15240431 1716 True 2678 2678 94.838 1 1718 1 chr4D.!!$R1 1717
7 TraesCS7D01G442000 chr4D 490087526 490089244 1718 True 2564 2564 93.623 1 1718 1 chr4D.!!$R2 1717
8 TraesCS7D01G442000 chr1B 584459937 584461655 1718 True 2608 2608 94.084 1 1717 1 chr1B.!!$R1 1716
9 TraesCS7D01G442000 chr4A 629502174 629503888 1714 False 2499 2499 92.990 1 1718 1 chr4A.!!$F1 1717

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
387 388 1.065926 CAGTGGCCTTCATGAGCACTA 60.066 52.381 3.32 0.0 30.49 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2174 2201 0.026285 GCGATGTCGTACATTGTGGC 59.974 55.0 13.37 7.35 41.12 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 3.418068 GTCGTCGTCGTCCTCGGT 61.418 66.667 1.33 0.00 38.33 4.69
93 94 2.322212 TCGAGGTCGATCTGCTAGC 58.678 57.895 0.91 8.10 44.22 3.42
155 156 2.027653 CGCTTCTTCTTCCTCCTCCTTT 60.028 50.000 0.00 0.00 0.00 3.11
274 275 4.058817 CACTTCTTCCTCTGTTTAGCGTT 58.941 43.478 0.00 0.00 0.00 4.84
387 388 1.065926 CAGTGGCCTTCATGAGCACTA 60.066 52.381 3.32 0.00 30.49 2.74
403 404 7.898014 TGAGCACTACATTAGATTCCTTCTA 57.102 36.000 0.00 0.00 35.79 2.10
815 824 2.991540 GCAGCCCCTTCACCCAAC 60.992 66.667 0.00 0.00 0.00 3.77
816 825 2.846532 CAGCCCCTTCACCCAACT 59.153 61.111 0.00 0.00 0.00 3.16
1137 1147 0.627469 ATCAGGGTTGGGCCACCTAT 60.627 55.000 14.86 7.19 39.65 2.57
1155 1165 2.916702 ATGCAGCCGTTCATCAGATA 57.083 45.000 0.00 0.00 0.00 1.98
1266 1282 1.228657 GGAAGCACGACGAAGCCTTT 61.229 55.000 0.00 0.00 0.00 3.11
1268 1284 0.531974 AAGCACGACGAAGCCTTTGA 60.532 50.000 0.00 0.00 0.00 2.69
1283 1299 1.275291 CTTTGACGCCAAGGAGTAGGA 59.725 52.381 0.00 0.00 31.75 2.94
1462 1480 1.153269 TTGTGCCGAAGTGTGCTGA 60.153 52.632 0.00 0.00 0.00 4.26
1718 1745 1.892862 CGGTAACCAAACACGCCCA 60.893 57.895 0.00 0.00 0.00 5.36
1725 1752 1.349688 ACCAAACACGCCCATAGAGAA 59.650 47.619 0.00 0.00 0.00 2.87
1726 1753 2.026262 ACCAAACACGCCCATAGAGAAT 60.026 45.455 0.00 0.00 0.00 2.40
1727 1754 3.016736 CCAAACACGCCCATAGAGAATT 58.983 45.455 0.00 0.00 0.00 2.17
1728 1755 3.443681 CCAAACACGCCCATAGAGAATTT 59.556 43.478 0.00 0.00 0.00 1.82
1729 1756 4.082245 CCAAACACGCCCATAGAGAATTTT 60.082 41.667 0.00 0.00 0.00 1.82
1730 1757 5.469479 CAAACACGCCCATAGAGAATTTTT 58.531 37.500 0.00 0.00 0.00 1.94
1731 1758 4.701956 ACACGCCCATAGAGAATTTTTG 57.298 40.909 0.00 0.00 0.00 2.44
1732 1759 3.119495 ACACGCCCATAGAGAATTTTTGC 60.119 43.478 0.00 0.00 0.00 3.68
1733 1760 2.427095 ACGCCCATAGAGAATTTTTGCC 59.573 45.455 0.00 0.00 0.00 4.52
1734 1761 2.223805 CGCCCATAGAGAATTTTTGCCC 60.224 50.000 0.00 0.00 0.00 5.36
1735 1762 3.033909 GCCCATAGAGAATTTTTGCCCT 58.966 45.455 0.00 0.00 0.00 5.19
1736 1763 3.068732 GCCCATAGAGAATTTTTGCCCTC 59.931 47.826 0.00 0.00 0.00 4.30
1737 1764 4.280819 CCCATAGAGAATTTTTGCCCTCA 58.719 43.478 0.00 0.00 0.00 3.86
1738 1765 4.897670 CCCATAGAGAATTTTTGCCCTCAT 59.102 41.667 0.00 0.00 0.00 2.90
1739 1766 5.221382 CCCATAGAGAATTTTTGCCCTCATG 60.221 44.000 0.00 0.00 0.00 3.07
1740 1767 3.881937 AGAGAATTTTTGCCCTCATGC 57.118 42.857 0.00 0.00 0.00 4.06
1741 1768 3.167485 AGAGAATTTTTGCCCTCATGCA 58.833 40.909 0.00 0.00 40.07 3.96
1742 1769 3.056322 AGAGAATTTTTGCCCTCATGCAC 60.056 43.478 0.00 0.00 41.88 4.57
1743 1770 2.027837 AGAATTTTTGCCCTCATGCACC 60.028 45.455 0.00 0.00 41.88 5.01
1744 1771 0.614812 ATTTTTGCCCTCATGCACCC 59.385 50.000 0.00 0.00 41.88 4.61
1745 1772 0.471591 TTTTTGCCCTCATGCACCCT 60.472 50.000 0.00 0.00 41.88 4.34
1746 1773 1.186917 TTTTGCCCTCATGCACCCTG 61.187 55.000 0.00 0.00 41.88 4.45
1747 1774 4.746309 TGCCCTCATGCACCCTGC 62.746 66.667 0.00 0.00 45.29 4.85
1757 1784 2.676608 CACCCTGCATGCACCCTA 59.323 61.111 18.46 0.00 0.00 3.53
1758 1785 1.750399 CACCCTGCATGCACCCTAC 60.750 63.158 18.46 0.00 0.00 3.18
1759 1786 2.124151 CCCTGCATGCACCCTACC 60.124 66.667 18.46 0.00 0.00 3.18
1760 1787 2.676608 CCTGCATGCACCCTACCA 59.323 61.111 18.46 0.00 0.00 3.25
1761 1788 1.001020 CCTGCATGCACCCTACCAA 60.001 57.895 18.46 0.00 0.00 3.67
1762 1789 0.611618 CCTGCATGCACCCTACCAAA 60.612 55.000 18.46 0.00 0.00 3.28
1763 1790 0.527565 CTGCATGCACCCTACCAAAC 59.472 55.000 18.46 0.00 0.00 2.93
1764 1791 0.178978 TGCATGCACCCTACCAAACA 60.179 50.000 18.46 0.00 0.00 2.83
1765 1792 0.243636 GCATGCACCCTACCAAACAC 59.756 55.000 14.21 0.00 0.00 3.32
1766 1793 1.614996 CATGCACCCTACCAAACACA 58.385 50.000 0.00 0.00 0.00 3.72
1767 1794 1.269448 CATGCACCCTACCAAACACAC 59.731 52.381 0.00 0.00 0.00 3.82
1768 1795 0.466555 TGCACCCTACCAAACACACC 60.467 55.000 0.00 0.00 0.00 4.16
1769 1796 1.176619 GCACCCTACCAAACACACCC 61.177 60.000 0.00 0.00 0.00 4.61
1770 1797 0.476771 CACCCTACCAAACACACCCT 59.523 55.000 0.00 0.00 0.00 4.34
1771 1798 1.133606 CACCCTACCAAACACACCCTT 60.134 52.381 0.00 0.00 0.00 3.95
1772 1799 2.106857 CACCCTACCAAACACACCCTTA 59.893 50.000 0.00 0.00 0.00 2.69
1773 1800 2.374170 ACCCTACCAAACACACCCTTAG 59.626 50.000 0.00 0.00 0.00 2.18
1774 1801 2.374170 CCCTACCAAACACACCCTTAGT 59.626 50.000 0.00 0.00 0.00 2.24
1775 1802 3.583966 CCCTACCAAACACACCCTTAGTA 59.416 47.826 0.00 0.00 0.00 1.82
1776 1803 4.323257 CCCTACCAAACACACCCTTAGTAG 60.323 50.000 0.00 0.00 0.00 2.57
1777 1804 3.136009 ACCAAACACACCCTTAGTAGC 57.864 47.619 0.00 0.00 0.00 3.58
1778 1805 2.709397 ACCAAACACACCCTTAGTAGCT 59.291 45.455 0.00 0.00 0.00 3.32
1779 1806 3.905591 ACCAAACACACCCTTAGTAGCTA 59.094 43.478 0.00 0.00 0.00 3.32
1780 1807 4.020485 ACCAAACACACCCTTAGTAGCTAG 60.020 45.833 0.00 0.00 0.00 3.42
1781 1808 4.504858 CAAACACACCCTTAGTAGCTAGG 58.495 47.826 0.00 0.00 0.00 3.02
1782 1809 3.752359 ACACACCCTTAGTAGCTAGGA 57.248 47.619 1.53 0.00 0.00 2.94
1783 1810 3.363627 ACACACCCTTAGTAGCTAGGAC 58.636 50.000 1.53 0.00 0.00 3.85
1784 1811 2.694109 CACACCCTTAGTAGCTAGGACC 59.306 54.545 1.53 0.00 0.00 4.46
1785 1812 2.313945 ACACCCTTAGTAGCTAGGACCA 59.686 50.000 1.53 0.00 0.00 4.02
1786 1813 2.959707 CACCCTTAGTAGCTAGGACCAG 59.040 54.545 1.53 0.00 0.00 4.00
1787 1814 2.586368 ACCCTTAGTAGCTAGGACCAGT 59.414 50.000 1.53 0.00 0.00 4.00
1788 1815 2.959707 CCCTTAGTAGCTAGGACCAGTG 59.040 54.545 1.53 0.00 0.00 3.66
1789 1816 2.362717 CCTTAGTAGCTAGGACCAGTGC 59.637 54.545 0.00 0.00 0.00 4.40
1790 1817 3.292460 CTTAGTAGCTAGGACCAGTGCT 58.708 50.000 10.08 10.08 39.30 4.40
1791 1818 2.239681 AGTAGCTAGGACCAGTGCTT 57.760 50.000 10.40 0.00 37.02 3.91
1792 1819 2.541466 AGTAGCTAGGACCAGTGCTTT 58.459 47.619 10.40 0.00 37.02 3.51
1793 1820 2.907042 AGTAGCTAGGACCAGTGCTTTT 59.093 45.455 10.40 0.00 37.02 2.27
1794 1821 2.191128 AGCTAGGACCAGTGCTTTTG 57.809 50.000 0.00 0.00 30.96 2.44
1795 1822 1.421646 AGCTAGGACCAGTGCTTTTGT 59.578 47.619 0.00 0.00 30.96 2.83
1796 1823 1.537202 GCTAGGACCAGTGCTTTTGTG 59.463 52.381 0.00 0.00 32.14 3.33
1797 1824 2.851195 CTAGGACCAGTGCTTTTGTGT 58.149 47.619 0.00 0.00 32.14 3.72
1798 1825 3.805807 GCTAGGACCAGTGCTTTTGTGTA 60.806 47.826 0.00 0.00 32.14 2.90
1799 1826 2.572290 AGGACCAGTGCTTTTGTGTAC 58.428 47.619 0.00 0.00 0.00 2.90
1800 1827 2.172717 AGGACCAGTGCTTTTGTGTACT 59.827 45.455 0.00 0.00 33.28 2.73
1801 1828 2.548480 GGACCAGTGCTTTTGTGTACTC 59.452 50.000 0.00 0.00 30.70 2.59
1802 1829 3.202906 GACCAGTGCTTTTGTGTACTCA 58.797 45.455 0.00 0.00 30.70 3.41
1803 1830 3.815401 GACCAGTGCTTTTGTGTACTCAT 59.185 43.478 0.00 0.00 30.70 2.90
1804 1831 4.207165 ACCAGTGCTTTTGTGTACTCATT 58.793 39.130 0.00 0.00 30.70 2.57
1805 1832 4.275936 ACCAGTGCTTTTGTGTACTCATTC 59.724 41.667 0.00 0.00 30.70 2.67
1806 1833 4.516698 CCAGTGCTTTTGTGTACTCATTCT 59.483 41.667 0.00 0.00 30.70 2.40
1807 1834 5.009010 CCAGTGCTTTTGTGTACTCATTCTT 59.991 40.000 0.00 0.00 30.70 2.52
1808 1835 6.460123 CCAGTGCTTTTGTGTACTCATTCTTT 60.460 38.462 0.00 0.00 30.70 2.52
1809 1836 6.634436 CAGTGCTTTTGTGTACTCATTCTTTC 59.366 38.462 0.00 0.00 30.70 2.62
1810 1837 6.543831 AGTGCTTTTGTGTACTCATTCTTTCT 59.456 34.615 0.00 0.00 0.00 2.52
1811 1838 6.853362 GTGCTTTTGTGTACTCATTCTTTCTC 59.147 38.462 0.00 0.00 0.00 2.87
1812 1839 6.017109 TGCTTTTGTGTACTCATTCTTTCTCC 60.017 38.462 0.00 0.00 0.00 3.71
1813 1840 6.017109 GCTTTTGTGTACTCATTCTTTCTCCA 60.017 38.462 0.00 0.00 0.00 3.86
1814 1841 7.308830 GCTTTTGTGTACTCATTCTTTCTCCAT 60.309 37.037 0.00 0.00 0.00 3.41
1815 1842 7.672983 TTTGTGTACTCATTCTTTCTCCATC 57.327 36.000 0.00 0.00 0.00 3.51
1816 1843 6.358974 TGTGTACTCATTCTTTCTCCATCA 57.641 37.500 0.00 0.00 0.00 3.07
1817 1844 6.166279 TGTGTACTCATTCTTTCTCCATCAC 58.834 40.000 0.00 0.00 0.00 3.06
1818 1845 5.582665 GTGTACTCATTCTTTCTCCATCACC 59.417 44.000 0.00 0.00 0.00 4.02
1819 1846 4.227864 ACTCATTCTTTCTCCATCACCC 57.772 45.455 0.00 0.00 0.00 4.61
1820 1847 3.848975 ACTCATTCTTTCTCCATCACCCT 59.151 43.478 0.00 0.00 0.00 4.34
1821 1848 4.080638 ACTCATTCTTTCTCCATCACCCTC 60.081 45.833 0.00 0.00 0.00 4.30
1822 1849 4.107072 TCATTCTTTCTCCATCACCCTCT 58.893 43.478 0.00 0.00 0.00 3.69
1823 1850 4.537688 TCATTCTTTCTCCATCACCCTCTT 59.462 41.667 0.00 0.00 0.00 2.85
1824 1851 5.014544 TCATTCTTTCTCCATCACCCTCTTT 59.985 40.000 0.00 0.00 0.00 2.52
1825 1852 4.292186 TCTTTCTCCATCACCCTCTTTG 57.708 45.455 0.00 0.00 0.00 2.77
1826 1853 3.652869 TCTTTCTCCATCACCCTCTTTGT 59.347 43.478 0.00 0.00 0.00 2.83
1827 1854 3.703001 TTCTCCATCACCCTCTTTGTC 57.297 47.619 0.00 0.00 0.00 3.18
1828 1855 1.909302 TCTCCATCACCCTCTTTGTCC 59.091 52.381 0.00 0.00 0.00 4.02
1829 1856 0.991920 TCCATCACCCTCTTTGTCCC 59.008 55.000 0.00 0.00 0.00 4.46
1830 1857 0.034089 CCATCACCCTCTTTGTCCCC 60.034 60.000 0.00 0.00 0.00 4.81
1831 1858 0.995024 CATCACCCTCTTTGTCCCCT 59.005 55.000 0.00 0.00 0.00 4.79
1832 1859 0.995024 ATCACCCTCTTTGTCCCCTG 59.005 55.000 0.00 0.00 0.00 4.45
1833 1860 1.303643 CACCCTCTTTGTCCCCTGC 60.304 63.158 0.00 0.00 0.00 4.85
1834 1861 1.774217 ACCCTCTTTGTCCCCTGCA 60.774 57.895 0.00 0.00 0.00 4.41
1835 1862 1.001641 CCCTCTTTGTCCCCTGCAG 60.002 63.158 6.78 6.78 0.00 4.41
1836 1863 1.763770 CCTCTTTGTCCCCTGCAGT 59.236 57.895 13.81 0.00 0.00 4.40
1837 1864 0.607489 CCTCTTTGTCCCCTGCAGTG 60.607 60.000 13.81 0.00 0.00 3.66
1838 1865 0.607489 CTCTTTGTCCCCTGCAGTGG 60.607 60.000 9.26 9.26 0.00 4.00
1839 1866 2.203480 TTTGTCCCCTGCAGTGGC 60.203 61.111 10.85 6.53 41.68 5.01
1840 1867 4.641645 TTGTCCCCTGCAGTGGCG 62.642 66.667 10.85 6.82 45.35 5.69
1842 1869 4.329545 GTCCCCTGCAGTGGCGAA 62.330 66.667 10.85 0.00 45.35 4.70
1843 1870 4.020617 TCCCCTGCAGTGGCGAAG 62.021 66.667 10.85 0.23 45.35 3.79
1844 1871 4.335647 CCCCTGCAGTGGCGAAGT 62.336 66.667 13.81 0.00 45.35 3.01
1845 1872 3.052082 CCCTGCAGTGGCGAAGTG 61.052 66.667 13.81 0.00 45.35 3.16
1846 1873 2.281070 CCTGCAGTGGCGAAGTGT 60.281 61.111 13.81 0.00 45.35 3.55
1847 1874 2.610694 CCTGCAGTGGCGAAGTGTG 61.611 63.158 13.81 0.00 45.35 3.82
1848 1875 1.595109 CTGCAGTGGCGAAGTGTGA 60.595 57.895 5.25 0.00 45.35 3.58
1849 1876 1.153269 TGCAGTGGCGAAGTGTGAA 60.153 52.632 0.00 0.00 45.35 3.18
1850 1877 1.279840 GCAGTGGCGAAGTGTGAAC 59.720 57.895 0.00 0.00 0.00 3.18
1851 1878 1.941812 CAGTGGCGAAGTGTGAACC 59.058 57.895 0.00 0.00 0.00 3.62
1852 1879 0.813610 CAGTGGCGAAGTGTGAACCA 60.814 55.000 0.00 0.00 0.00 3.67
1853 1880 0.107410 AGTGGCGAAGTGTGAACCAA 60.107 50.000 0.00 0.00 30.82 3.67
1854 1881 0.736053 GTGGCGAAGTGTGAACCAAA 59.264 50.000 0.00 0.00 30.82 3.28
1855 1882 1.336755 GTGGCGAAGTGTGAACCAAAT 59.663 47.619 0.00 0.00 30.82 2.32
1856 1883 2.550606 GTGGCGAAGTGTGAACCAAATA 59.449 45.455 0.00 0.00 30.82 1.40
1857 1884 3.190535 GTGGCGAAGTGTGAACCAAATAT 59.809 43.478 0.00 0.00 30.82 1.28
1858 1885 3.823873 TGGCGAAGTGTGAACCAAATATT 59.176 39.130 0.00 0.00 0.00 1.28
1859 1886 5.004448 TGGCGAAGTGTGAACCAAATATTA 58.996 37.500 0.00 0.00 0.00 0.98
1860 1887 5.123186 TGGCGAAGTGTGAACCAAATATTAG 59.877 40.000 0.00 0.00 0.00 1.73
1861 1888 5.448632 GGCGAAGTGTGAACCAAATATTAGG 60.449 44.000 0.00 0.00 0.00 2.69
1862 1889 5.353123 GCGAAGTGTGAACCAAATATTAGGA 59.647 40.000 0.00 0.00 0.00 2.94
1863 1890 6.456988 GCGAAGTGTGAACCAAATATTAGGAG 60.457 42.308 0.00 0.00 0.00 3.69
1864 1891 6.037172 CGAAGTGTGAACCAAATATTAGGAGG 59.963 42.308 0.00 0.00 0.00 4.30
1865 1892 5.755849 AGTGTGAACCAAATATTAGGAGGG 58.244 41.667 0.00 0.00 0.00 4.30
1866 1893 4.887655 GTGTGAACCAAATATTAGGAGGGG 59.112 45.833 0.00 0.00 0.00 4.79
1867 1894 3.889538 GTGAACCAAATATTAGGAGGGGC 59.110 47.826 0.00 0.00 0.00 5.80
1868 1895 3.117284 TGAACCAAATATTAGGAGGGGCC 60.117 47.826 0.00 0.00 0.00 5.80
1869 1896 2.509243 ACCAAATATTAGGAGGGGCCA 58.491 47.619 4.39 0.00 40.02 5.36
1870 1897 2.862597 ACCAAATATTAGGAGGGGCCAA 59.137 45.455 4.39 0.00 40.02 4.52
1871 1898 3.273618 ACCAAATATTAGGAGGGGCCAAA 59.726 43.478 4.39 0.00 40.02 3.28
1872 1899 4.265078 ACCAAATATTAGGAGGGGCCAAAA 60.265 41.667 4.39 0.00 40.02 2.44
1873 1900 4.907269 CCAAATATTAGGAGGGGCCAAAAT 59.093 41.667 4.39 0.00 40.02 1.82
1874 1901 5.221702 CCAAATATTAGGAGGGGCCAAAATG 60.222 44.000 4.39 0.00 40.02 2.32
1875 1902 5.417170 AATATTAGGAGGGGCCAAAATGA 57.583 39.130 4.39 0.00 40.02 2.57
1876 1903 2.826674 TTAGGAGGGGCCAAAATGAG 57.173 50.000 4.39 0.00 40.02 2.90
1877 1904 1.681229 TAGGAGGGGCCAAAATGAGT 58.319 50.000 4.39 0.00 40.02 3.41
1878 1905 0.040204 AGGAGGGGCCAAAATGAGTG 59.960 55.000 4.39 0.00 40.02 3.51
1879 1906 0.251787 GGAGGGGCCAAAATGAGTGT 60.252 55.000 4.39 0.00 36.34 3.55
1880 1907 1.005450 GGAGGGGCCAAAATGAGTGTA 59.995 52.381 4.39 0.00 36.34 2.90
1881 1908 2.358195 GGAGGGGCCAAAATGAGTGTAT 60.358 50.000 4.39 0.00 36.34 2.29
1882 1909 2.689983 GAGGGGCCAAAATGAGTGTATG 59.310 50.000 4.39 0.00 0.00 2.39
1883 1910 2.311542 AGGGGCCAAAATGAGTGTATGA 59.688 45.455 4.39 0.00 0.00 2.15
1884 1911 2.427095 GGGGCCAAAATGAGTGTATGAC 59.573 50.000 4.39 0.00 0.00 3.06
1885 1912 3.088532 GGGCCAAAATGAGTGTATGACA 58.911 45.455 4.39 0.00 0.00 3.58
1886 1913 3.701040 GGGCCAAAATGAGTGTATGACAT 59.299 43.478 4.39 0.00 0.00 3.06
1887 1914 4.887071 GGGCCAAAATGAGTGTATGACATA 59.113 41.667 4.39 0.00 0.00 2.29
1888 1915 5.359576 GGGCCAAAATGAGTGTATGACATAA 59.640 40.000 4.39 0.00 0.00 1.90
1889 1916 6.127479 GGGCCAAAATGAGTGTATGACATAAA 60.127 38.462 4.39 0.00 0.00 1.40
1890 1917 7.319646 GGCCAAAATGAGTGTATGACATAAAA 58.680 34.615 0.00 0.00 0.00 1.52
1891 1918 7.816995 GGCCAAAATGAGTGTATGACATAAAAA 59.183 33.333 0.00 0.00 0.00 1.94
1892 1919 8.863049 GCCAAAATGAGTGTATGACATAAAAAG 58.137 33.333 0.00 0.00 0.00 2.27
1893 1920 9.357652 CCAAAATGAGTGTATGACATAAAAAGG 57.642 33.333 0.00 0.00 0.00 3.11
1894 1921 9.357652 CAAAATGAGTGTATGACATAAAAAGGG 57.642 33.333 0.00 0.00 0.00 3.95
1895 1922 8.650143 AAATGAGTGTATGACATAAAAAGGGT 57.350 30.769 0.00 0.00 0.00 4.34
1896 1923 8.650143 AATGAGTGTATGACATAAAAAGGGTT 57.350 30.769 0.00 0.00 0.00 4.11
1897 1924 9.747898 AATGAGTGTATGACATAAAAAGGGTTA 57.252 29.630 0.00 0.00 0.00 2.85
1898 1925 8.786826 TGAGTGTATGACATAAAAAGGGTTAG 57.213 34.615 0.00 0.00 0.00 2.34
1899 1926 7.827236 TGAGTGTATGACATAAAAAGGGTTAGG 59.173 37.037 0.00 0.00 0.00 2.69
1900 1927 7.924541 AGTGTATGACATAAAAAGGGTTAGGA 58.075 34.615 0.00 0.00 0.00 2.94
1901 1928 8.557450 AGTGTATGACATAAAAAGGGTTAGGAT 58.443 33.333 0.00 0.00 0.00 3.24
1902 1929 8.621286 GTGTATGACATAAAAAGGGTTAGGATG 58.379 37.037 0.00 0.00 0.00 3.51
1903 1930 8.553153 TGTATGACATAAAAAGGGTTAGGATGA 58.447 33.333 0.00 0.00 0.00 2.92
1904 1931 9.574516 GTATGACATAAAAAGGGTTAGGATGAT 57.425 33.333 0.00 0.00 0.00 2.45
1907 1934 9.627123 TGACATAAAAAGGGTTAGGATGATTAG 57.373 33.333 0.00 0.00 0.00 1.73
1908 1935 9.847224 GACATAAAAAGGGTTAGGATGATTAGA 57.153 33.333 0.00 0.00 0.00 2.10
1909 1936 9.853177 ACATAAAAAGGGTTAGGATGATTAGAG 57.147 33.333 0.00 0.00 0.00 2.43
1912 1939 5.793030 AAGGGTTAGGATGATTAGAGACG 57.207 43.478 0.00 0.00 0.00 4.18
1913 1940 4.805744 AGGGTTAGGATGATTAGAGACGT 58.194 43.478 0.00 0.00 0.00 4.34
1914 1941 4.828387 AGGGTTAGGATGATTAGAGACGTC 59.172 45.833 7.70 7.70 0.00 4.34
1915 1942 4.320348 GGGTTAGGATGATTAGAGACGTCG 60.320 50.000 10.46 0.00 0.00 5.12
1916 1943 4.320348 GGTTAGGATGATTAGAGACGTCGG 60.320 50.000 10.46 0.00 0.00 4.79
1917 1944 3.210232 AGGATGATTAGAGACGTCGGA 57.790 47.619 10.46 0.00 0.00 4.55
1918 1945 3.142951 AGGATGATTAGAGACGTCGGAG 58.857 50.000 10.46 0.00 0.00 4.63
1919 1946 2.226912 GGATGATTAGAGACGTCGGAGG 59.773 54.545 10.46 0.00 0.00 4.30
1920 1947 2.704464 TGATTAGAGACGTCGGAGGA 57.296 50.000 10.46 0.00 0.00 3.71
1921 1948 3.210232 TGATTAGAGACGTCGGAGGAT 57.790 47.619 10.46 2.13 0.00 3.24
1922 1949 3.552875 TGATTAGAGACGTCGGAGGATT 58.447 45.455 10.46 0.00 0.00 3.01
1923 1950 4.711399 TGATTAGAGACGTCGGAGGATTA 58.289 43.478 10.46 0.00 0.00 1.75
1924 1951 4.755629 TGATTAGAGACGTCGGAGGATTAG 59.244 45.833 10.46 0.00 0.00 1.73
1925 1952 2.713863 AGAGACGTCGGAGGATTAGT 57.286 50.000 10.46 0.00 0.00 2.24
1926 1953 3.834489 AGAGACGTCGGAGGATTAGTA 57.166 47.619 10.46 0.00 0.00 1.82
1927 1954 3.731089 AGAGACGTCGGAGGATTAGTAG 58.269 50.000 10.46 0.00 0.00 2.57
1928 1955 3.387374 AGAGACGTCGGAGGATTAGTAGA 59.613 47.826 10.46 0.00 0.00 2.59
1929 1956 3.731089 AGACGTCGGAGGATTAGTAGAG 58.269 50.000 10.46 0.00 0.00 2.43
1930 1957 2.220313 ACGTCGGAGGATTAGTAGAGC 58.780 52.381 4.48 0.00 0.00 4.09
1931 1958 2.219458 CGTCGGAGGATTAGTAGAGCA 58.781 52.381 0.00 0.00 0.00 4.26
1932 1959 2.617308 CGTCGGAGGATTAGTAGAGCAA 59.383 50.000 0.00 0.00 0.00 3.91
1933 1960 3.253677 CGTCGGAGGATTAGTAGAGCAAT 59.746 47.826 0.00 0.00 0.00 3.56
1934 1961 4.261656 CGTCGGAGGATTAGTAGAGCAATT 60.262 45.833 0.00 0.00 0.00 2.32
1935 1962 5.048921 CGTCGGAGGATTAGTAGAGCAATTA 60.049 44.000 0.00 0.00 0.00 1.40
1936 1963 6.383415 GTCGGAGGATTAGTAGAGCAATTAG 58.617 44.000 0.00 0.00 0.00 1.73
1937 1964 5.477291 TCGGAGGATTAGTAGAGCAATTAGG 59.523 44.000 0.00 0.00 0.00 2.69
1938 1965 5.477291 CGGAGGATTAGTAGAGCAATTAGGA 59.523 44.000 0.00 0.00 0.00 2.94
1939 1966 6.349777 CGGAGGATTAGTAGAGCAATTAGGAG 60.350 46.154 0.00 0.00 0.00 3.69
1940 1967 6.722129 GGAGGATTAGTAGAGCAATTAGGAGA 59.278 42.308 0.00 0.00 0.00 3.71
1941 1968 7.233757 GGAGGATTAGTAGAGCAATTAGGAGAA 59.766 40.741 0.00 0.00 0.00 2.87
1942 1969 8.554490 AGGATTAGTAGAGCAATTAGGAGAAA 57.446 34.615 0.00 0.00 0.00 2.52
1943 1970 9.165057 AGGATTAGTAGAGCAATTAGGAGAAAT 57.835 33.333 0.00 0.00 0.00 2.17
2012 2039 3.758931 GCCATTGGCCCCGTTGTC 61.759 66.667 17.28 0.00 44.06 3.18
2013 2040 2.035626 CCATTGGCCCCGTTGTCT 59.964 61.111 0.00 0.00 0.00 3.41
2014 2041 1.606313 CCATTGGCCCCGTTGTCTT 60.606 57.895 0.00 0.00 0.00 3.01
2015 2042 1.184970 CCATTGGCCCCGTTGTCTTT 61.185 55.000 0.00 0.00 0.00 2.52
2016 2043 0.678950 CATTGGCCCCGTTGTCTTTT 59.321 50.000 0.00 0.00 0.00 2.27
2017 2044 0.678950 ATTGGCCCCGTTGTCTTTTG 59.321 50.000 0.00 0.00 0.00 2.44
2018 2045 2.022240 TTGGCCCCGTTGTCTTTTGC 62.022 55.000 0.00 0.00 0.00 3.68
2019 2046 2.050442 GCCCCGTTGTCTTTTGCG 60.050 61.111 0.00 0.00 0.00 4.85
2020 2047 2.841160 GCCCCGTTGTCTTTTGCGT 61.841 57.895 0.00 0.00 0.00 5.24
2021 2048 1.731093 CCCCGTTGTCTTTTGCGTT 59.269 52.632 0.00 0.00 0.00 4.84
2022 2049 0.593773 CCCCGTTGTCTTTTGCGTTG 60.594 55.000 0.00 0.00 0.00 4.10
2023 2050 0.378962 CCCGTTGTCTTTTGCGTTGA 59.621 50.000 0.00 0.00 0.00 3.18
2024 2051 1.001815 CCCGTTGTCTTTTGCGTTGAT 60.002 47.619 0.00 0.00 0.00 2.57
2025 2052 2.542824 CCCGTTGTCTTTTGCGTTGATT 60.543 45.455 0.00 0.00 0.00 2.57
2026 2053 3.112580 CCGTTGTCTTTTGCGTTGATTT 58.887 40.909 0.00 0.00 0.00 2.17
2027 2054 3.179599 CCGTTGTCTTTTGCGTTGATTTC 59.820 43.478 0.00 0.00 0.00 2.17
2028 2055 3.788694 CGTTGTCTTTTGCGTTGATTTCA 59.211 39.130 0.00 0.00 0.00 2.69
2029 2056 4.316377 CGTTGTCTTTTGCGTTGATTTCAC 60.316 41.667 0.00 0.00 0.00 3.18
2030 2057 3.701241 TGTCTTTTGCGTTGATTTCACC 58.299 40.909 0.00 0.00 0.00 4.02
2031 2058 3.129462 TGTCTTTTGCGTTGATTTCACCA 59.871 39.130 0.00 0.00 0.00 4.17
2032 2059 4.202101 TGTCTTTTGCGTTGATTTCACCAT 60.202 37.500 0.00 0.00 0.00 3.55
2033 2060 4.744631 GTCTTTTGCGTTGATTTCACCATT 59.255 37.500 0.00 0.00 0.00 3.16
2034 2061 5.234116 GTCTTTTGCGTTGATTTCACCATTT 59.766 36.000 0.00 0.00 0.00 2.32
2035 2062 5.233902 TCTTTTGCGTTGATTTCACCATTTG 59.766 36.000 0.00 0.00 0.00 2.32
2036 2063 3.724508 TGCGTTGATTTCACCATTTGT 57.275 38.095 0.00 0.00 0.00 2.83
2037 2064 4.837896 TGCGTTGATTTCACCATTTGTA 57.162 36.364 0.00 0.00 0.00 2.41
2038 2065 4.541779 TGCGTTGATTTCACCATTTGTAC 58.458 39.130 0.00 0.00 0.00 2.90
2039 2066 4.277174 TGCGTTGATTTCACCATTTGTACT 59.723 37.500 0.00 0.00 0.00 2.73
2040 2067 4.851558 GCGTTGATTTCACCATTTGTACTC 59.148 41.667 0.00 0.00 0.00 2.59
2041 2068 5.334879 GCGTTGATTTCACCATTTGTACTCT 60.335 40.000 0.00 0.00 0.00 3.24
2042 2069 6.079763 CGTTGATTTCACCATTTGTACTCTG 58.920 40.000 0.00 0.00 0.00 3.35
2043 2070 6.381801 GTTGATTTCACCATTTGTACTCTGG 58.618 40.000 7.20 7.20 36.09 3.86
2044 2071 5.630121 TGATTTCACCATTTGTACTCTGGT 58.370 37.500 8.26 8.26 44.02 4.00
2045 2072 5.705441 TGATTTCACCATTTGTACTCTGGTC 59.295 40.000 10.43 2.75 41.30 4.02
2046 2073 4.698201 TTCACCATTTGTACTCTGGTCA 57.302 40.909 10.43 0.00 41.30 4.02
2047 2074 4.908601 TCACCATTTGTACTCTGGTCAT 57.091 40.909 10.43 0.00 41.30 3.06
2048 2075 5.241403 TCACCATTTGTACTCTGGTCATT 57.759 39.130 10.43 0.00 41.30 2.57
2049 2076 5.630121 TCACCATTTGTACTCTGGTCATTT 58.370 37.500 10.43 0.00 41.30 2.32
2050 2077 6.068010 TCACCATTTGTACTCTGGTCATTTT 58.932 36.000 10.43 0.00 41.30 1.82
2051 2078 6.016360 TCACCATTTGTACTCTGGTCATTTTG 60.016 38.462 10.43 1.96 41.30 2.44
2052 2079 5.243730 ACCATTTGTACTCTGGTCATTTTGG 59.756 40.000 8.26 0.00 38.99 3.28
2053 2080 5.336690 CCATTTGTACTCTGGTCATTTTGGG 60.337 44.000 0.00 0.00 0.00 4.12
2054 2081 2.790433 TGTACTCTGGTCATTTTGGGC 58.210 47.619 0.00 0.00 0.00 5.36
2055 2082 2.092323 GTACTCTGGTCATTTTGGGCC 58.908 52.381 0.00 0.00 0.00 5.80
2056 2083 0.779997 ACTCTGGTCATTTTGGGCCT 59.220 50.000 4.53 0.00 0.00 5.19
2057 2084 1.147817 ACTCTGGTCATTTTGGGCCTT 59.852 47.619 4.53 0.00 0.00 4.35
2058 2085 2.250924 CTCTGGTCATTTTGGGCCTTT 58.749 47.619 4.53 0.00 0.00 3.11
2059 2086 2.634453 CTCTGGTCATTTTGGGCCTTTT 59.366 45.455 4.53 0.00 0.00 2.27
2060 2087 2.632512 TCTGGTCATTTTGGGCCTTTTC 59.367 45.455 4.53 0.00 0.00 2.29
2061 2088 2.634453 CTGGTCATTTTGGGCCTTTTCT 59.366 45.455 4.53 0.00 0.00 2.52
2062 2089 3.831911 CTGGTCATTTTGGGCCTTTTCTA 59.168 43.478 4.53 0.00 0.00 2.10
2063 2090 4.227197 TGGTCATTTTGGGCCTTTTCTAA 58.773 39.130 4.53 0.00 0.00 2.10
2064 2091 4.656112 TGGTCATTTTGGGCCTTTTCTAAA 59.344 37.500 4.53 0.00 0.00 1.85
2065 2092 5.131142 TGGTCATTTTGGGCCTTTTCTAAAA 59.869 36.000 4.53 2.03 0.00 1.52
2066 2093 6.183361 TGGTCATTTTGGGCCTTTTCTAAAAT 60.183 34.615 4.53 4.59 32.82 1.82
2067 2094 7.016661 TGGTCATTTTGGGCCTTTTCTAAAATA 59.983 33.333 4.53 0.00 31.78 1.40
2068 2095 8.046708 GGTCATTTTGGGCCTTTTCTAAAATAT 58.953 33.333 4.53 0.00 31.78 1.28
2077 2104 9.764363 GGGCCTTTTCTAAAATATAAATTCAGG 57.236 33.333 0.84 0.00 0.00 3.86
2083 2110 9.998752 TTTCTAAAATATAAATTCAGGTGGGGA 57.001 29.630 0.00 0.00 0.00 4.81
2084 2111 9.998752 TTCTAAAATATAAATTCAGGTGGGGAA 57.001 29.630 0.00 0.00 0.00 3.97
2085 2112 9.416284 TCTAAAATATAAATTCAGGTGGGGAAC 57.584 33.333 0.00 0.00 0.00 3.62
2098 2125 4.252493 GGAACCTCTCCCCCTTGT 57.748 61.111 0.00 0.00 38.44 3.16
2099 2126 2.476081 GGAACCTCTCCCCCTTGTT 58.524 57.895 0.00 0.00 38.44 2.83
2100 2127 0.778083 GGAACCTCTCCCCCTTGTTT 59.222 55.000 0.00 0.00 38.44 2.83
2101 2128 1.990327 GGAACCTCTCCCCCTTGTTTA 59.010 52.381 0.00 0.00 38.44 2.01
2102 2129 2.377531 GGAACCTCTCCCCCTTGTTTAA 59.622 50.000 0.00 0.00 38.44 1.52
2103 2130 3.181426 GGAACCTCTCCCCCTTGTTTAAA 60.181 47.826 0.00 0.00 38.44 1.52
2104 2131 4.476297 GAACCTCTCCCCCTTGTTTAAAA 58.524 43.478 0.00 0.00 0.00 1.52
2105 2132 4.759793 ACCTCTCCCCCTTGTTTAAAAT 57.240 40.909 0.00 0.00 0.00 1.82
2106 2133 5.871324 ACCTCTCCCCCTTGTTTAAAATA 57.129 39.130 0.00 0.00 0.00 1.40
2107 2134 6.222227 ACCTCTCCCCCTTGTTTAAAATAA 57.778 37.500 0.00 0.00 0.00 1.40
2108 2135 6.626238 ACCTCTCCCCCTTGTTTAAAATAAA 58.374 36.000 0.00 0.00 0.00 1.40
2109 2136 7.077095 ACCTCTCCCCCTTGTTTAAAATAAAA 58.923 34.615 0.00 0.00 0.00 1.52
2110 2137 7.015877 ACCTCTCCCCCTTGTTTAAAATAAAAC 59.984 37.037 0.00 0.00 39.35 2.43
2111 2138 7.015779 CCTCTCCCCCTTGTTTAAAATAAAACA 59.984 37.037 0.00 0.00 45.20 2.83
2112 2139 7.958088 TCTCCCCCTTGTTTAAAATAAAACAG 58.042 34.615 2.80 0.00 46.77 3.16
2113 2140 7.015779 TCTCCCCCTTGTTTAAAATAAAACAGG 59.984 37.037 5.02 5.02 46.77 4.00
2114 2141 5.703592 CCCCCTTGTTTAAAATAAAACAGGC 59.296 40.000 6.18 0.00 46.77 4.85
2115 2142 6.465178 CCCCCTTGTTTAAAATAAAACAGGCT 60.465 38.462 6.18 0.00 46.77 4.58
2116 2143 7.256368 CCCCCTTGTTTAAAATAAAACAGGCTA 60.256 37.037 6.18 0.00 46.77 3.93
2117 2144 8.318412 CCCCTTGTTTAAAATAAAACAGGCTAT 58.682 33.333 6.18 0.00 46.77 2.97
2118 2145 9.150348 CCCTTGTTTAAAATAAAACAGGCTATG 57.850 33.333 6.18 0.00 46.77 2.23
2119 2146 9.150348 CCTTGTTTAAAATAAAACAGGCTATGG 57.850 33.333 6.18 0.47 46.77 2.74
2120 2147 9.705290 CTTGTTTAAAATAAAACAGGCTATGGT 57.295 29.630 2.80 0.00 46.77 3.55
2121 2148 9.482627 TTGTTTAAAATAAAACAGGCTATGGTG 57.517 29.630 2.80 0.00 46.77 4.17
2122 2149 8.643324 TGTTTAAAATAAAACAGGCTATGGTGT 58.357 29.630 0.00 0.00 42.78 4.16
2123 2150 9.135843 GTTTAAAATAAAACAGGCTATGGTGTC 57.864 33.333 0.00 0.00 38.85 3.67
2124 2151 6.909550 AAAATAAAACAGGCTATGGTGTCA 57.090 33.333 0.00 0.00 0.00 3.58
2125 2152 6.909550 AAATAAAACAGGCTATGGTGTCAA 57.090 33.333 0.00 0.00 0.00 3.18
2126 2153 6.515272 AATAAAACAGGCTATGGTGTCAAG 57.485 37.500 0.00 0.00 0.00 3.02
2127 2154 3.508845 AAACAGGCTATGGTGTCAAGT 57.491 42.857 0.00 0.00 0.00 3.16
2128 2155 4.634012 AAACAGGCTATGGTGTCAAGTA 57.366 40.909 0.00 0.00 0.00 2.24
2129 2156 3.895232 ACAGGCTATGGTGTCAAGTAG 57.105 47.619 0.00 0.00 0.00 2.57
2130 2157 3.173965 ACAGGCTATGGTGTCAAGTAGT 58.826 45.455 0.00 0.00 0.00 2.73
2131 2158 4.350245 ACAGGCTATGGTGTCAAGTAGTA 58.650 43.478 0.00 0.00 0.00 1.82
2132 2159 4.962995 ACAGGCTATGGTGTCAAGTAGTAT 59.037 41.667 0.00 0.00 0.00 2.12
2133 2160 5.069251 ACAGGCTATGGTGTCAAGTAGTATC 59.931 44.000 0.00 0.00 0.00 2.24
2134 2161 5.303078 CAGGCTATGGTGTCAAGTAGTATCT 59.697 44.000 0.00 0.00 0.00 1.98
2135 2162 6.490381 CAGGCTATGGTGTCAAGTAGTATCTA 59.510 42.308 0.00 0.00 0.00 1.98
2136 2163 7.014326 CAGGCTATGGTGTCAAGTAGTATCTAA 59.986 40.741 0.00 0.00 0.00 2.10
2137 2164 7.014422 AGGCTATGGTGTCAAGTAGTATCTAAC 59.986 40.741 0.00 0.00 0.00 2.34
2138 2165 7.201884 GGCTATGGTGTCAAGTAGTATCTAACA 60.202 40.741 0.00 0.00 0.00 2.41
2139 2166 8.361139 GCTATGGTGTCAAGTAGTATCTAACAT 58.639 37.037 0.00 0.00 0.00 2.71
2140 2167 9.684448 CTATGGTGTCAAGTAGTATCTAACATG 57.316 37.037 0.00 0.00 0.00 3.21
2141 2168 6.873997 TGGTGTCAAGTAGTATCTAACATGG 58.126 40.000 0.00 0.00 0.00 3.66
2142 2169 5.753921 GGTGTCAAGTAGTATCTAACATGGC 59.246 44.000 0.00 0.00 0.00 4.40
2143 2170 6.407074 GGTGTCAAGTAGTATCTAACATGGCT 60.407 42.308 0.00 0.00 0.00 4.75
2144 2171 7.042335 GTGTCAAGTAGTATCTAACATGGCTT 58.958 38.462 0.00 0.00 0.00 4.35
2145 2172 7.549488 GTGTCAAGTAGTATCTAACATGGCTTT 59.451 37.037 0.00 0.00 0.00 3.51
2146 2173 7.549134 TGTCAAGTAGTATCTAACATGGCTTTG 59.451 37.037 0.00 0.00 0.00 2.77
2147 2174 6.538742 TCAAGTAGTATCTAACATGGCTTTGC 59.461 38.462 0.00 0.00 0.00 3.68
2148 2175 5.989477 AGTAGTATCTAACATGGCTTTGCA 58.011 37.500 0.00 0.00 0.00 4.08
2149 2176 5.817816 AGTAGTATCTAACATGGCTTTGCAC 59.182 40.000 0.00 0.00 0.00 4.57
2150 2177 4.848357 AGTATCTAACATGGCTTTGCACT 58.152 39.130 0.00 0.00 0.00 4.40
2151 2178 5.989477 AGTATCTAACATGGCTTTGCACTA 58.011 37.500 0.00 0.00 0.00 2.74
2152 2179 5.817816 AGTATCTAACATGGCTTTGCACTAC 59.182 40.000 0.00 0.00 0.00 2.73
2153 2180 4.286297 TCTAACATGGCTTTGCACTACT 57.714 40.909 0.00 0.00 0.00 2.57
2154 2181 4.651778 TCTAACATGGCTTTGCACTACTT 58.348 39.130 0.00 0.00 0.00 2.24
2155 2182 3.923017 AACATGGCTTTGCACTACTTC 57.077 42.857 0.00 0.00 0.00 3.01
2156 2183 3.146104 ACATGGCTTTGCACTACTTCT 57.854 42.857 0.00 0.00 0.00 2.85
2157 2184 3.077359 ACATGGCTTTGCACTACTTCTC 58.923 45.455 0.00 0.00 0.00 2.87
2158 2185 2.928801 TGGCTTTGCACTACTTCTCA 57.071 45.000 0.00 0.00 0.00 3.27
2159 2186 2.771089 TGGCTTTGCACTACTTCTCAG 58.229 47.619 0.00 0.00 0.00 3.35
2160 2187 2.079925 GGCTTTGCACTACTTCTCAGG 58.920 52.381 0.00 0.00 0.00 3.86
2161 2188 2.079925 GCTTTGCACTACTTCTCAGGG 58.920 52.381 0.00 0.00 0.00 4.45
2162 2189 2.079925 CTTTGCACTACTTCTCAGGGC 58.920 52.381 0.00 0.00 43.02 5.19
2165 2192 1.661341 GCACTACTTCTCAGGGCATG 58.339 55.000 0.00 0.00 42.24 4.06
2166 2193 1.745141 GCACTACTTCTCAGGGCATGG 60.745 57.143 0.00 0.00 42.24 3.66
2167 2194 0.543749 ACTACTTCTCAGGGCATGGC 59.456 55.000 11.56 11.56 0.00 4.40
2168 2195 0.543277 CTACTTCTCAGGGCATGGCA 59.457 55.000 22.06 0.00 0.00 4.92
2169 2196 1.142465 CTACTTCTCAGGGCATGGCAT 59.858 52.381 22.06 11.91 0.00 4.40
2170 2197 0.106819 ACTTCTCAGGGCATGGCATC 60.107 55.000 22.06 4.37 0.00 3.91
2171 2198 0.183014 CTTCTCAGGGCATGGCATCT 59.817 55.000 22.06 6.92 0.00 2.90
2172 2199 0.106868 TTCTCAGGGCATGGCATCTG 60.107 55.000 22.06 18.77 34.47 2.90
2173 2200 1.528542 CTCAGGGCATGGCATCTGG 60.529 63.158 22.06 9.86 34.15 3.86
2174 2201 2.520982 CAGGGCATGGCATCTGGG 60.521 66.667 22.06 0.00 31.42 4.45
2175 2202 4.534824 AGGGCATGGCATCTGGGC 62.535 66.667 22.06 0.00 43.73 5.36
2183 2210 4.023137 GCATCTGGGCCACAATGT 57.977 55.556 19.93 0.00 0.00 2.71
2184 2211 3.189568 GCATCTGGGCCACAATGTA 57.810 52.632 19.93 0.00 0.00 2.29
2185 2212 0.740737 GCATCTGGGCCACAATGTAC 59.259 55.000 19.93 6.18 0.00 2.90
2186 2213 1.016627 CATCTGGGCCACAATGTACG 58.983 55.000 0.00 0.00 0.00 3.67
2187 2214 0.908910 ATCTGGGCCACAATGTACGA 59.091 50.000 0.00 0.00 0.00 3.43
2188 2215 0.036765 TCTGGGCCACAATGTACGAC 60.037 55.000 0.00 0.00 0.00 4.34
2189 2216 0.321210 CTGGGCCACAATGTACGACA 60.321 55.000 0.00 0.00 0.00 4.35
2190 2217 0.326595 TGGGCCACAATGTACGACAT 59.673 50.000 0.00 0.00 41.31 3.06
2191 2218 1.014352 GGGCCACAATGTACGACATC 58.986 55.000 4.39 0.00 37.97 3.06
2192 2219 0.650512 GGCCACAATGTACGACATCG 59.349 55.000 0.00 0.00 37.97 3.84
2193 2220 0.026285 GCCACAATGTACGACATCGC 59.974 55.000 0.14 0.00 37.97 4.58
2194 2221 1.640428 CCACAATGTACGACATCGCT 58.360 50.000 0.14 0.00 37.97 4.93
2195 2222 1.324435 CCACAATGTACGACATCGCTG 59.676 52.381 0.14 0.00 37.97 5.18
2196 2223 1.324435 CACAATGTACGACATCGCTGG 59.676 52.381 0.14 0.00 37.97 4.85
2197 2224 0.301687 CAATGTACGACATCGCTGGC 59.698 55.000 0.14 0.00 37.97 4.85
2203 2230 3.567797 GACATCGCTGGCGCTTCC 61.568 66.667 7.64 0.00 39.59 3.46
2204 2231 4.087892 ACATCGCTGGCGCTTCCT 62.088 61.111 7.64 0.00 39.59 3.36
2205 2232 3.267860 CATCGCTGGCGCTTCCTC 61.268 66.667 7.64 0.00 39.59 3.71
2206 2233 4.537433 ATCGCTGGCGCTTCCTCC 62.537 66.667 7.64 0.00 39.59 4.30
2208 2235 4.845580 CGCTGGCGCTTCCTCCAT 62.846 66.667 7.64 0.00 35.26 3.41
2209 2236 3.207669 GCTGGCGCTTCCTCCATG 61.208 66.667 7.64 0.00 35.26 3.66
2210 2237 2.515523 CTGGCGCTTCCTCCATGG 60.516 66.667 7.64 4.97 35.26 3.66
2211 2238 4.802051 TGGCGCTTCCTCCATGGC 62.802 66.667 6.96 0.00 35.26 4.40
2212 2239 4.496336 GGCGCTTCCTCCATGGCT 62.496 66.667 6.96 0.00 35.26 4.75
2213 2240 2.439156 GCGCTTCCTCCATGGCTT 60.439 61.111 6.96 0.00 35.26 4.35
2214 2241 2.476320 GCGCTTCCTCCATGGCTTC 61.476 63.158 6.96 0.00 35.26 3.86
2215 2242 1.222936 CGCTTCCTCCATGGCTTCT 59.777 57.895 6.96 0.00 35.26 2.85
2216 2243 0.393537 CGCTTCCTCCATGGCTTCTT 60.394 55.000 6.96 0.00 35.26 2.52
2217 2244 1.387539 GCTTCCTCCATGGCTTCTTC 58.612 55.000 6.96 0.00 35.26 2.87
2218 2245 2.021208 GCTTCCTCCATGGCTTCTTCC 61.021 57.143 6.96 0.00 35.26 3.46
2219 2246 1.563410 CTTCCTCCATGGCTTCTTCCT 59.437 52.381 6.96 0.00 35.26 3.36
2220 2247 1.207791 TCCTCCATGGCTTCTTCCTC 58.792 55.000 6.96 0.00 35.26 3.71
2221 2248 0.914644 CCTCCATGGCTTCTTCCTCA 59.085 55.000 6.96 0.00 0.00 3.86
2222 2249 1.283029 CCTCCATGGCTTCTTCCTCAA 59.717 52.381 6.96 0.00 0.00 3.02
2223 2250 2.641305 CTCCATGGCTTCTTCCTCAAG 58.359 52.381 6.96 0.00 0.00 3.02
2224 2251 1.101331 CCATGGCTTCTTCCTCAAGC 58.899 55.000 0.00 0.00 44.79 4.01
2227 2254 3.896479 GCTTCTTCCTCAAGCCCG 58.104 61.111 0.00 0.00 40.45 6.13
2228 2255 1.746991 GCTTCTTCCTCAAGCCCGG 60.747 63.158 0.00 0.00 40.45 5.73
2229 2256 1.679898 CTTCTTCCTCAAGCCCGGT 59.320 57.895 0.00 0.00 0.00 5.28
2230 2257 0.391793 CTTCTTCCTCAAGCCCGGTC 60.392 60.000 0.00 0.00 0.00 4.79
2231 2258 1.125093 TTCTTCCTCAAGCCCGGTCA 61.125 55.000 0.00 0.00 0.00 4.02
2232 2259 1.078848 CTTCCTCAAGCCCGGTCAG 60.079 63.158 0.00 0.00 0.00 3.51
2233 2260 1.535444 TTCCTCAAGCCCGGTCAGA 60.535 57.895 0.00 0.00 0.00 3.27
2234 2261 0.909610 TTCCTCAAGCCCGGTCAGAT 60.910 55.000 0.00 0.00 0.00 2.90
2235 2262 1.144936 CCTCAAGCCCGGTCAGATC 59.855 63.158 0.00 0.00 0.00 2.75
2236 2263 1.144936 CTCAAGCCCGGTCAGATCC 59.855 63.158 0.00 0.00 0.00 3.36
2237 2264 1.306141 TCAAGCCCGGTCAGATCCT 60.306 57.895 0.00 0.00 0.00 3.24
2238 2265 1.153289 CAAGCCCGGTCAGATCCTG 60.153 63.158 0.00 0.00 0.00 3.86
2239 2266 3.036429 AAGCCCGGTCAGATCCTGC 62.036 63.158 0.00 0.00 0.00 4.85
2240 2267 3.785859 GCCCGGTCAGATCCTGCA 61.786 66.667 0.00 0.00 0.00 4.41
2241 2268 2.989639 CCCGGTCAGATCCTGCAA 59.010 61.111 0.00 0.00 0.00 4.08
2242 2269 1.450312 CCCGGTCAGATCCTGCAAC 60.450 63.158 0.00 0.00 0.00 4.17
2243 2270 1.450312 CCGGTCAGATCCTGCAACC 60.450 63.158 0.00 0.00 0.00 3.77
2244 2271 1.296392 CGGTCAGATCCTGCAACCA 59.704 57.895 2.61 0.00 30.64 3.67
2245 2272 0.321564 CGGTCAGATCCTGCAACCAA 60.322 55.000 2.61 0.00 30.64 3.67
2246 2273 1.168714 GGTCAGATCCTGCAACCAAC 58.831 55.000 0.00 0.00 31.30 3.77
2247 2274 1.271597 GGTCAGATCCTGCAACCAACT 60.272 52.381 0.00 0.00 31.30 3.16
2248 2275 2.027192 GGTCAGATCCTGCAACCAACTA 60.027 50.000 0.00 0.00 31.30 2.24
2249 2276 3.003480 GTCAGATCCTGCAACCAACTAC 58.997 50.000 0.00 0.00 0.00 2.73
2250 2277 2.906389 TCAGATCCTGCAACCAACTACT 59.094 45.455 0.00 0.00 0.00 2.57
2251 2278 3.005554 CAGATCCTGCAACCAACTACTG 58.994 50.000 0.00 0.00 0.00 2.74
2252 2279 2.906389 AGATCCTGCAACCAACTACTGA 59.094 45.455 0.00 0.00 0.00 3.41
2253 2280 2.839486 TCCTGCAACCAACTACTGAG 57.161 50.000 0.00 0.00 0.00 3.35
2254 2281 2.047061 TCCTGCAACCAACTACTGAGT 58.953 47.619 0.00 0.00 37.59 3.41
2255 2282 2.037251 TCCTGCAACCAACTACTGAGTC 59.963 50.000 0.00 0.00 33.58 3.36
2256 2283 2.037772 CCTGCAACCAACTACTGAGTCT 59.962 50.000 0.00 0.00 33.58 3.24
2257 2284 3.495100 CCTGCAACCAACTACTGAGTCTT 60.495 47.826 0.00 0.00 33.58 3.01
2258 2285 3.728845 TGCAACCAACTACTGAGTCTTC 58.271 45.455 0.00 0.00 33.58 2.87
2259 2286 3.388024 TGCAACCAACTACTGAGTCTTCT 59.612 43.478 0.00 0.00 33.58 2.85
2260 2287 4.587262 TGCAACCAACTACTGAGTCTTCTA 59.413 41.667 0.00 0.00 33.58 2.10
2261 2288 5.164954 GCAACCAACTACTGAGTCTTCTAG 58.835 45.833 0.00 0.00 33.58 2.43
2262 2289 5.715070 CAACCAACTACTGAGTCTTCTAGG 58.285 45.833 0.00 0.00 33.58 3.02
2263 2290 3.764972 ACCAACTACTGAGTCTTCTAGGC 59.235 47.826 0.00 0.00 33.58 3.93
2264 2291 3.181495 CCAACTACTGAGTCTTCTAGGCG 60.181 52.174 0.00 0.00 33.58 5.52
2265 2292 2.018515 ACTACTGAGTCTTCTAGGCGC 58.981 52.381 0.00 0.00 0.00 6.53
2266 2293 2.294074 CTACTGAGTCTTCTAGGCGCT 58.706 52.381 7.64 0.00 0.00 5.92
2267 2294 1.551452 ACTGAGTCTTCTAGGCGCTT 58.449 50.000 7.64 0.52 0.00 4.68
2268 2295 1.474879 ACTGAGTCTTCTAGGCGCTTC 59.525 52.381 7.64 0.00 0.00 3.86
2269 2296 1.474478 CTGAGTCTTCTAGGCGCTTCA 59.526 52.381 7.64 0.00 0.00 3.02
2270 2297 1.893137 TGAGTCTTCTAGGCGCTTCAA 59.107 47.619 7.64 0.00 0.00 2.69
2271 2298 2.094494 TGAGTCTTCTAGGCGCTTCAAG 60.094 50.000 7.64 6.06 0.00 3.02
2272 2299 1.205893 AGTCTTCTAGGCGCTTCAAGG 59.794 52.381 7.64 0.00 0.00 3.61
2273 2300 1.066787 GTCTTCTAGGCGCTTCAAGGT 60.067 52.381 7.64 0.00 0.00 3.50
2274 2301 1.066858 TCTTCTAGGCGCTTCAAGGTG 60.067 52.381 7.64 0.00 0.00 4.00
2275 2302 0.036388 TTCTAGGCGCTTCAAGGTGG 60.036 55.000 7.64 0.00 0.00 4.61
2276 2303 1.450312 CTAGGCGCTTCAAGGTGGG 60.450 63.158 7.64 0.00 0.00 4.61
2277 2304 3.622060 TAGGCGCTTCAAGGTGGGC 62.622 63.158 7.64 0.00 40.67 5.36
2281 2308 4.954933 GCTTCAAGGTGGGCGATA 57.045 55.556 0.00 0.00 0.00 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 91 3.524606 GCCAGGCCGTCGTAGCTA 61.525 66.667 0.00 0.00 0.00 3.32
93 94 3.141488 AGAGCCAGGCCGTCGTAG 61.141 66.667 8.22 0.00 0.00 3.51
155 156 3.399181 GTCATCGGTGGGGAGCCA 61.399 66.667 0.00 0.00 0.00 4.75
274 275 1.945354 GAATCAGGCCGTCTCCGACA 61.945 60.000 0.00 0.00 35.63 4.35
387 388 7.472663 GCCTGAGATGTAGAAGGAATCTAATGT 60.473 40.741 0.00 0.00 42.24 2.71
476 477 2.593956 GGCCTTCTTCCTCGGGTGT 61.594 63.158 0.00 0.00 0.00 4.16
639 648 3.279434 GTCACTCTTCTCCTCCTCTCTC 58.721 54.545 0.00 0.00 0.00 3.20
640 649 2.647299 TGTCACTCTTCTCCTCCTCTCT 59.353 50.000 0.00 0.00 0.00 3.10
815 824 2.432628 GCACAACCTCGTCGGGAG 60.433 66.667 0.00 0.00 42.75 4.30
816 825 2.915659 AGCACAACCTCGTCGGGA 60.916 61.111 0.00 0.00 36.97 5.14
903 912 2.975248 TTGCGGCGCTTGTTGCTA 60.975 55.556 33.26 6.83 40.11 3.49
1137 1147 2.689553 TTATCTGATGAACGGCTGCA 57.310 45.000 0.50 0.00 0.00 4.41
1155 1165 2.738643 CGTCACCATGTAGCCGATCTTT 60.739 50.000 0.00 0.00 0.00 2.52
1266 1282 1.255667 GGTCCTACTCCTTGGCGTCA 61.256 60.000 0.00 0.00 0.00 4.35
1268 1284 2.348888 CGGTCCTACTCCTTGGCGT 61.349 63.158 0.00 0.00 0.00 5.68
1416 1433 2.617308 GCACACATCATAAGCAGAGCAT 59.383 45.455 0.00 0.00 0.00 3.79
1462 1480 4.288626 TCTTTGGCTAGTTGGTGAGGTTAT 59.711 41.667 0.00 0.00 0.00 1.89
1604 1623 1.209019 TGCATGTTGTTTGGTTGCCTT 59.791 42.857 0.00 0.00 32.39 4.35
1703 1730 2.568062 TCTCTATGGGCGTGTTTGGTTA 59.432 45.455 0.00 0.00 0.00 2.85
1718 1745 4.957954 TGCATGAGGGCAAAAATTCTCTAT 59.042 37.500 0.00 0.00 41.65 1.98
1725 1752 0.614812 GGGTGCATGAGGGCAAAAAT 59.385 50.000 0.00 0.00 46.93 1.82
1726 1753 0.471591 AGGGTGCATGAGGGCAAAAA 60.472 50.000 0.00 0.00 46.93 1.94
1727 1754 1.155859 AGGGTGCATGAGGGCAAAA 59.844 52.632 0.00 0.00 46.93 2.44
1728 1755 1.607178 CAGGGTGCATGAGGGCAAA 60.607 57.895 0.00 0.00 46.93 3.68
1729 1756 2.036098 CAGGGTGCATGAGGGCAA 59.964 61.111 0.00 0.00 46.93 4.52
1730 1757 4.746309 GCAGGGTGCATGAGGGCA 62.746 66.667 0.00 0.00 44.26 5.36
1739 1766 3.643595 TAGGGTGCATGCAGGGTGC 62.644 63.158 23.41 8.84 45.29 5.01
1740 1767 1.750399 GTAGGGTGCATGCAGGGTG 60.750 63.158 23.41 0.00 0.00 4.61
1741 1768 2.677228 GTAGGGTGCATGCAGGGT 59.323 61.111 23.41 10.77 0.00 4.34
1742 1769 2.124151 GGTAGGGTGCATGCAGGG 60.124 66.667 23.41 0.00 0.00 4.45
1743 1770 0.611618 TTTGGTAGGGTGCATGCAGG 60.612 55.000 23.41 0.00 0.00 4.85
1744 1771 0.527565 GTTTGGTAGGGTGCATGCAG 59.472 55.000 23.41 0.00 0.00 4.41
1745 1772 0.178978 TGTTTGGTAGGGTGCATGCA 60.179 50.000 18.46 18.46 0.00 3.96
1746 1773 0.243636 GTGTTTGGTAGGGTGCATGC 59.756 55.000 11.82 11.82 0.00 4.06
1747 1774 1.269448 GTGTGTTTGGTAGGGTGCATG 59.731 52.381 0.00 0.00 0.00 4.06
1748 1775 1.616159 GTGTGTTTGGTAGGGTGCAT 58.384 50.000 0.00 0.00 0.00 3.96
1749 1776 0.466555 GGTGTGTTTGGTAGGGTGCA 60.467 55.000 0.00 0.00 0.00 4.57
1750 1777 1.176619 GGGTGTGTTTGGTAGGGTGC 61.177 60.000 0.00 0.00 0.00 5.01
1751 1778 0.476771 AGGGTGTGTTTGGTAGGGTG 59.523 55.000 0.00 0.00 0.00 4.61
1752 1779 1.228190 AAGGGTGTGTTTGGTAGGGT 58.772 50.000 0.00 0.00 0.00 4.34
1753 1780 2.374170 ACTAAGGGTGTGTTTGGTAGGG 59.626 50.000 0.00 0.00 0.00 3.53
1754 1781 3.782656 ACTAAGGGTGTGTTTGGTAGG 57.217 47.619 0.00 0.00 0.00 3.18
1755 1782 4.020485 AGCTACTAAGGGTGTGTTTGGTAG 60.020 45.833 0.00 4.12 39.76 3.18
1756 1783 3.905591 AGCTACTAAGGGTGTGTTTGGTA 59.094 43.478 0.00 0.00 0.00 3.25
1757 1784 2.709397 AGCTACTAAGGGTGTGTTTGGT 59.291 45.455 0.00 0.00 0.00 3.67
1758 1785 3.418684 AGCTACTAAGGGTGTGTTTGG 57.581 47.619 0.00 0.00 0.00 3.28
1759 1786 4.222145 TCCTAGCTACTAAGGGTGTGTTTG 59.778 45.833 0.35 0.00 0.00 2.93
1760 1787 4.222366 GTCCTAGCTACTAAGGGTGTGTTT 59.778 45.833 0.35 0.00 0.00 2.83
1761 1788 3.768215 GTCCTAGCTACTAAGGGTGTGTT 59.232 47.826 0.35 0.00 0.00 3.32
1762 1789 3.363627 GTCCTAGCTACTAAGGGTGTGT 58.636 50.000 0.35 0.00 0.00 3.72
1763 1790 2.694109 GGTCCTAGCTACTAAGGGTGTG 59.306 54.545 0.35 0.00 0.00 3.82
1764 1791 2.313945 TGGTCCTAGCTACTAAGGGTGT 59.686 50.000 0.35 0.00 0.00 4.16
1765 1792 2.959707 CTGGTCCTAGCTACTAAGGGTG 59.040 54.545 0.35 0.00 0.00 4.61
1766 1793 2.586368 ACTGGTCCTAGCTACTAAGGGT 59.414 50.000 0.35 0.00 0.00 4.34
1767 1794 2.959707 CACTGGTCCTAGCTACTAAGGG 59.040 54.545 0.35 0.00 0.00 3.95
1768 1795 2.362717 GCACTGGTCCTAGCTACTAAGG 59.637 54.545 0.00 0.00 0.00 2.69
1769 1796 3.292460 AGCACTGGTCCTAGCTACTAAG 58.708 50.000 0.00 0.00 35.19 2.18
1770 1797 3.383698 AGCACTGGTCCTAGCTACTAA 57.616 47.619 0.00 0.00 35.19 2.24
1771 1798 3.383698 AAGCACTGGTCCTAGCTACTA 57.616 47.619 4.14 0.00 36.07 1.82
1772 1799 2.239681 AAGCACTGGTCCTAGCTACT 57.760 50.000 4.14 0.00 36.07 2.57
1773 1800 3.003480 CAAAAGCACTGGTCCTAGCTAC 58.997 50.000 4.14 0.00 36.07 3.58
1774 1801 2.637872 ACAAAAGCACTGGTCCTAGCTA 59.362 45.455 0.00 0.00 36.07 3.32
1775 1802 1.421646 ACAAAAGCACTGGTCCTAGCT 59.578 47.619 0.00 0.00 39.37 3.32
1776 1803 1.537202 CACAAAAGCACTGGTCCTAGC 59.463 52.381 0.00 0.00 0.00 3.42
1777 1804 2.851195 ACACAAAAGCACTGGTCCTAG 58.149 47.619 0.00 0.00 0.00 3.02
1778 1805 3.389983 AGTACACAAAAGCACTGGTCCTA 59.610 43.478 0.00 0.00 0.00 2.94
1779 1806 2.172717 AGTACACAAAAGCACTGGTCCT 59.827 45.455 0.00 0.00 0.00 3.85
1780 1807 2.548480 GAGTACACAAAAGCACTGGTCC 59.452 50.000 0.00 0.00 0.00 4.46
1781 1808 3.202906 TGAGTACACAAAAGCACTGGTC 58.797 45.455 0.00 0.00 0.00 4.02
1782 1809 3.275617 TGAGTACACAAAAGCACTGGT 57.724 42.857 0.00 0.00 0.00 4.00
1783 1810 4.516698 AGAATGAGTACACAAAAGCACTGG 59.483 41.667 0.00 0.00 0.00 4.00
1784 1811 5.679734 AGAATGAGTACACAAAAGCACTG 57.320 39.130 0.00 0.00 0.00 3.66
1785 1812 6.543831 AGAAAGAATGAGTACACAAAAGCACT 59.456 34.615 0.00 0.00 0.00 4.40
1786 1813 6.729187 AGAAAGAATGAGTACACAAAAGCAC 58.271 36.000 0.00 0.00 0.00 4.40
1787 1814 6.017109 GGAGAAAGAATGAGTACACAAAAGCA 60.017 38.462 0.00 0.00 0.00 3.91
1788 1815 6.017109 TGGAGAAAGAATGAGTACACAAAAGC 60.017 38.462 0.00 0.00 0.00 3.51
1789 1816 7.496529 TGGAGAAAGAATGAGTACACAAAAG 57.503 36.000 0.00 0.00 0.00 2.27
1790 1817 7.719193 TGATGGAGAAAGAATGAGTACACAAAA 59.281 33.333 0.00 0.00 0.00 2.44
1791 1818 7.173218 GTGATGGAGAAAGAATGAGTACACAAA 59.827 37.037 0.00 0.00 0.00 2.83
1792 1819 6.650807 GTGATGGAGAAAGAATGAGTACACAA 59.349 38.462 0.00 0.00 0.00 3.33
1793 1820 6.166279 GTGATGGAGAAAGAATGAGTACACA 58.834 40.000 0.00 0.00 0.00 3.72
1794 1821 5.582665 GGTGATGGAGAAAGAATGAGTACAC 59.417 44.000 0.00 0.00 0.00 2.90
1795 1822 5.338381 GGGTGATGGAGAAAGAATGAGTACA 60.338 44.000 0.00 0.00 0.00 2.90
1796 1823 5.104735 AGGGTGATGGAGAAAGAATGAGTAC 60.105 44.000 0.00 0.00 0.00 2.73
1797 1824 5.032846 AGGGTGATGGAGAAAGAATGAGTA 58.967 41.667 0.00 0.00 0.00 2.59
1798 1825 3.848975 AGGGTGATGGAGAAAGAATGAGT 59.151 43.478 0.00 0.00 0.00 3.41
1799 1826 4.163839 AGAGGGTGATGGAGAAAGAATGAG 59.836 45.833 0.00 0.00 0.00 2.90
1800 1827 4.107072 AGAGGGTGATGGAGAAAGAATGA 58.893 43.478 0.00 0.00 0.00 2.57
1801 1828 4.500499 AGAGGGTGATGGAGAAAGAATG 57.500 45.455 0.00 0.00 0.00 2.67
1802 1829 5.222213 ACAAAGAGGGTGATGGAGAAAGAAT 60.222 40.000 0.00 0.00 0.00 2.40
1803 1830 4.104738 ACAAAGAGGGTGATGGAGAAAGAA 59.895 41.667 0.00 0.00 0.00 2.52
1804 1831 3.652869 ACAAAGAGGGTGATGGAGAAAGA 59.347 43.478 0.00 0.00 0.00 2.52
1805 1832 4.006319 GACAAAGAGGGTGATGGAGAAAG 58.994 47.826 0.00 0.00 0.00 2.62
1806 1833 3.244911 GGACAAAGAGGGTGATGGAGAAA 60.245 47.826 0.00 0.00 0.00 2.52
1807 1834 2.305927 GGACAAAGAGGGTGATGGAGAA 59.694 50.000 0.00 0.00 0.00 2.87
1808 1835 1.909302 GGACAAAGAGGGTGATGGAGA 59.091 52.381 0.00 0.00 0.00 3.71
1809 1836 1.065126 GGGACAAAGAGGGTGATGGAG 60.065 57.143 0.00 0.00 0.00 3.86
1810 1837 0.991920 GGGACAAAGAGGGTGATGGA 59.008 55.000 0.00 0.00 0.00 3.41
1811 1838 0.034089 GGGGACAAAGAGGGTGATGG 60.034 60.000 0.00 0.00 0.00 3.51
1812 1839 0.995024 AGGGGACAAAGAGGGTGATG 59.005 55.000 0.00 0.00 0.00 3.07
1813 1840 0.995024 CAGGGGACAAAGAGGGTGAT 59.005 55.000 0.00 0.00 0.00 3.06
1814 1841 1.779061 GCAGGGGACAAAGAGGGTGA 61.779 60.000 0.00 0.00 0.00 4.02
1815 1842 1.303643 GCAGGGGACAAAGAGGGTG 60.304 63.158 0.00 0.00 0.00 4.61
1816 1843 1.774217 TGCAGGGGACAAAGAGGGT 60.774 57.895 0.00 0.00 0.00 4.34
1817 1844 1.001641 CTGCAGGGGACAAAGAGGG 60.002 63.158 5.57 0.00 0.00 4.30
1818 1845 0.607489 CACTGCAGGGGACAAAGAGG 60.607 60.000 19.93 0.00 0.00 3.69
1819 1846 0.607489 CCACTGCAGGGGACAAAGAG 60.607 60.000 32.52 0.00 0.00 2.85
1820 1847 1.455849 CCACTGCAGGGGACAAAGA 59.544 57.895 32.52 0.00 0.00 2.52
1821 1848 2.270986 GCCACTGCAGGGGACAAAG 61.271 63.158 39.55 11.55 37.47 2.77
1822 1849 2.203480 GCCACTGCAGGGGACAAA 60.203 61.111 39.55 0.00 37.47 2.83
1823 1850 4.641645 CGCCACTGCAGGGGACAA 62.642 66.667 39.55 0.00 43.81 3.18
1827 1854 4.335647 ACTTCGCCACTGCAGGGG 62.336 66.667 31.74 31.74 42.56 4.79
1828 1855 3.052082 CACTTCGCCACTGCAGGG 61.052 66.667 19.93 15.23 37.32 4.45
1829 1856 2.281070 ACACTTCGCCACTGCAGG 60.281 61.111 19.93 2.55 37.32 4.85
1830 1857 1.159713 TTCACACTTCGCCACTGCAG 61.160 55.000 13.48 13.48 37.32 4.41
1831 1858 1.153269 TTCACACTTCGCCACTGCA 60.153 52.632 0.00 0.00 37.32 4.41
1832 1859 1.279840 GTTCACACTTCGCCACTGC 59.720 57.895 0.00 0.00 0.00 4.40
1833 1860 0.813610 TGGTTCACACTTCGCCACTG 60.814 55.000 0.00 0.00 0.00 3.66
1834 1861 0.107410 TTGGTTCACACTTCGCCACT 60.107 50.000 0.00 0.00 0.00 4.00
1835 1862 0.736053 TTTGGTTCACACTTCGCCAC 59.264 50.000 0.00 0.00 0.00 5.01
1836 1863 1.686355 ATTTGGTTCACACTTCGCCA 58.314 45.000 0.00 0.00 0.00 5.69
1837 1864 4.434713 AATATTTGGTTCACACTTCGCC 57.565 40.909 0.00 0.00 0.00 5.54
1838 1865 5.353123 TCCTAATATTTGGTTCACACTTCGC 59.647 40.000 14.47 0.00 0.00 4.70
1839 1866 6.037172 CCTCCTAATATTTGGTTCACACTTCG 59.963 42.308 14.47 0.00 0.00 3.79
1840 1867 6.318900 CCCTCCTAATATTTGGTTCACACTTC 59.681 42.308 14.47 0.00 0.00 3.01
1841 1868 6.187682 CCCTCCTAATATTTGGTTCACACTT 58.812 40.000 14.47 0.00 0.00 3.16
1842 1869 5.340027 CCCCTCCTAATATTTGGTTCACACT 60.340 44.000 14.47 0.00 0.00 3.55
1843 1870 4.887655 CCCCTCCTAATATTTGGTTCACAC 59.112 45.833 14.47 0.00 0.00 3.82
1844 1871 4.630184 GCCCCTCCTAATATTTGGTTCACA 60.630 45.833 14.47 0.00 0.00 3.58
1845 1872 3.889538 GCCCCTCCTAATATTTGGTTCAC 59.110 47.826 14.47 0.91 0.00 3.18
1846 1873 3.117284 GGCCCCTCCTAATATTTGGTTCA 60.117 47.826 14.47 0.00 0.00 3.18
1847 1874 3.117284 TGGCCCCTCCTAATATTTGGTTC 60.117 47.826 14.47 2.78 35.26 3.62
1848 1875 2.862597 TGGCCCCTCCTAATATTTGGTT 59.137 45.455 14.47 0.00 35.26 3.67
1849 1876 2.509243 TGGCCCCTCCTAATATTTGGT 58.491 47.619 14.47 0.00 35.26 3.67
1850 1877 3.611025 TTGGCCCCTCCTAATATTTGG 57.389 47.619 9.42 9.42 35.26 3.28
1851 1878 5.602145 TCATTTTGGCCCCTCCTAATATTTG 59.398 40.000 0.00 0.00 35.26 2.32
1852 1879 5.787327 TCATTTTGGCCCCTCCTAATATTT 58.213 37.500 0.00 0.00 35.26 1.40
1853 1880 5.103086 ACTCATTTTGGCCCCTCCTAATATT 60.103 40.000 0.00 0.00 35.26 1.28
1854 1881 4.420214 ACTCATTTTGGCCCCTCCTAATAT 59.580 41.667 0.00 0.00 35.26 1.28
1855 1882 3.791545 ACTCATTTTGGCCCCTCCTAATA 59.208 43.478 0.00 0.00 35.26 0.98
1856 1883 2.587307 ACTCATTTTGGCCCCTCCTAAT 59.413 45.455 0.00 0.00 35.26 1.73
1857 1884 2.000048 ACTCATTTTGGCCCCTCCTAA 59.000 47.619 0.00 0.00 35.26 2.69
1858 1885 1.284785 CACTCATTTTGGCCCCTCCTA 59.715 52.381 0.00 0.00 35.26 2.94
1859 1886 0.040204 CACTCATTTTGGCCCCTCCT 59.960 55.000 0.00 0.00 35.26 3.69
1860 1887 0.251787 ACACTCATTTTGGCCCCTCC 60.252 55.000 0.00 0.00 0.00 4.30
1861 1888 2.507407 TACACTCATTTTGGCCCCTC 57.493 50.000 0.00 0.00 0.00 4.30
1862 1889 2.311542 TCATACACTCATTTTGGCCCCT 59.688 45.455 0.00 0.00 0.00 4.79
1863 1890 2.427095 GTCATACACTCATTTTGGCCCC 59.573 50.000 0.00 0.00 0.00 5.80
1864 1891 3.088532 TGTCATACACTCATTTTGGCCC 58.911 45.455 0.00 0.00 0.00 5.80
1865 1892 4.989279 ATGTCATACACTCATTTTGGCC 57.011 40.909 0.00 0.00 0.00 5.36
1866 1893 8.755696 TTTTTATGTCATACACTCATTTTGGC 57.244 30.769 0.00 0.00 0.00 4.52
1867 1894 9.357652 CCTTTTTATGTCATACACTCATTTTGG 57.642 33.333 0.00 0.00 0.00 3.28
1868 1895 9.357652 CCCTTTTTATGTCATACACTCATTTTG 57.642 33.333 0.00 0.00 0.00 2.44
1869 1896 9.088987 ACCCTTTTTATGTCATACACTCATTTT 57.911 29.630 0.00 0.00 0.00 1.82
1870 1897 8.650143 ACCCTTTTTATGTCATACACTCATTT 57.350 30.769 0.00 0.00 0.00 2.32
1871 1898 8.650143 AACCCTTTTTATGTCATACACTCATT 57.350 30.769 0.00 0.00 0.00 2.57
1872 1899 9.396022 CTAACCCTTTTTATGTCATACACTCAT 57.604 33.333 0.00 0.00 0.00 2.90
1873 1900 7.827236 CCTAACCCTTTTTATGTCATACACTCA 59.173 37.037 0.00 0.00 0.00 3.41
1874 1901 8.044908 TCCTAACCCTTTTTATGTCATACACTC 58.955 37.037 0.00 0.00 0.00 3.51
1875 1902 7.924541 TCCTAACCCTTTTTATGTCATACACT 58.075 34.615 0.00 0.00 0.00 3.55
1876 1903 8.621286 CATCCTAACCCTTTTTATGTCATACAC 58.379 37.037 0.00 0.00 0.00 2.90
1877 1904 8.553153 TCATCCTAACCCTTTTTATGTCATACA 58.447 33.333 0.00 0.00 0.00 2.29
1878 1905 8.974060 TCATCCTAACCCTTTTTATGTCATAC 57.026 34.615 0.00 0.00 0.00 2.39
1881 1908 9.627123 CTAATCATCCTAACCCTTTTTATGTCA 57.373 33.333 0.00 0.00 0.00 3.58
1882 1909 9.847224 TCTAATCATCCTAACCCTTTTTATGTC 57.153 33.333 0.00 0.00 0.00 3.06
1883 1910 9.853177 CTCTAATCATCCTAACCCTTTTTATGT 57.147 33.333 0.00 0.00 0.00 2.29
1886 1913 8.202137 CGTCTCTAATCATCCTAACCCTTTTTA 58.798 37.037 0.00 0.00 0.00 1.52
1887 1914 7.048512 CGTCTCTAATCATCCTAACCCTTTTT 58.951 38.462 0.00 0.00 0.00 1.94
1888 1915 6.156429 ACGTCTCTAATCATCCTAACCCTTTT 59.844 38.462 0.00 0.00 0.00 2.27
1889 1916 5.661759 ACGTCTCTAATCATCCTAACCCTTT 59.338 40.000 0.00 0.00 0.00 3.11
1890 1917 5.209659 ACGTCTCTAATCATCCTAACCCTT 58.790 41.667 0.00 0.00 0.00 3.95
1891 1918 4.805744 ACGTCTCTAATCATCCTAACCCT 58.194 43.478 0.00 0.00 0.00 4.34
1892 1919 4.320348 CGACGTCTCTAATCATCCTAACCC 60.320 50.000 14.70 0.00 0.00 4.11
1893 1920 4.320348 CCGACGTCTCTAATCATCCTAACC 60.320 50.000 14.70 0.00 0.00 2.85
1894 1921 4.514441 TCCGACGTCTCTAATCATCCTAAC 59.486 45.833 14.70 0.00 0.00 2.34
1895 1922 4.711399 TCCGACGTCTCTAATCATCCTAA 58.289 43.478 14.70 0.00 0.00 2.69
1896 1923 4.316645 CTCCGACGTCTCTAATCATCCTA 58.683 47.826 14.70 0.00 0.00 2.94
1897 1924 3.142951 CTCCGACGTCTCTAATCATCCT 58.857 50.000 14.70 0.00 0.00 3.24
1898 1925 2.226912 CCTCCGACGTCTCTAATCATCC 59.773 54.545 14.70 0.00 0.00 3.51
1899 1926 3.139850 TCCTCCGACGTCTCTAATCATC 58.860 50.000 14.70 0.00 0.00 2.92
1900 1927 3.210232 TCCTCCGACGTCTCTAATCAT 57.790 47.619 14.70 0.00 0.00 2.45
1901 1928 2.704464 TCCTCCGACGTCTCTAATCA 57.296 50.000 14.70 0.00 0.00 2.57
1902 1929 4.756135 ACTAATCCTCCGACGTCTCTAATC 59.244 45.833 14.70 0.00 0.00 1.75
1903 1930 4.716794 ACTAATCCTCCGACGTCTCTAAT 58.283 43.478 14.70 0.00 0.00 1.73
1904 1931 4.148128 ACTAATCCTCCGACGTCTCTAA 57.852 45.455 14.70 0.00 0.00 2.10
1905 1932 3.834489 ACTAATCCTCCGACGTCTCTA 57.166 47.619 14.70 0.00 0.00 2.43
1906 1933 2.713863 ACTAATCCTCCGACGTCTCT 57.286 50.000 14.70 0.00 0.00 3.10
1907 1934 3.726607 TCTACTAATCCTCCGACGTCTC 58.273 50.000 14.70 0.00 0.00 3.36
1908 1935 3.731089 CTCTACTAATCCTCCGACGTCT 58.269 50.000 14.70 0.00 0.00 4.18
1909 1936 2.223845 GCTCTACTAATCCTCCGACGTC 59.776 54.545 5.18 5.18 0.00 4.34
1910 1937 2.220313 GCTCTACTAATCCTCCGACGT 58.780 52.381 0.00 0.00 0.00 4.34
1911 1938 2.219458 TGCTCTACTAATCCTCCGACG 58.781 52.381 0.00 0.00 0.00 5.12
1912 1939 4.857509 ATTGCTCTACTAATCCTCCGAC 57.142 45.455 0.00 0.00 0.00 4.79
1913 1940 5.477291 CCTAATTGCTCTACTAATCCTCCGA 59.523 44.000 0.00 0.00 0.00 4.55
1914 1941 5.477291 TCCTAATTGCTCTACTAATCCTCCG 59.523 44.000 0.00 0.00 0.00 4.63
1915 1942 6.722129 TCTCCTAATTGCTCTACTAATCCTCC 59.278 42.308 0.00 0.00 0.00 4.30
1916 1943 7.768807 TCTCCTAATTGCTCTACTAATCCTC 57.231 40.000 0.00 0.00 0.00 3.71
1917 1944 8.554490 TTTCTCCTAATTGCTCTACTAATCCT 57.446 34.615 0.00 0.00 0.00 3.24
1996 2023 1.184970 AAAGACAACGGGGCCAATGG 61.185 55.000 4.39 0.00 0.00 3.16
1997 2024 0.678950 AAAAGACAACGGGGCCAATG 59.321 50.000 4.39 3.07 0.00 2.82
1998 2025 0.678950 CAAAAGACAACGGGGCCAAT 59.321 50.000 4.39 0.00 0.00 3.16
1999 2026 2.022240 GCAAAAGACAACGGGGCCAA 62.022 55.000 4.39 0.00 0.00 4.52
2000 2027 2.494530 GCAAAAGACAACGGGGCCA 61.495 57.895 4.39 0.00 0.00 5.36
2001 2028 2.338620 GCAAAAGACAACGGGGCC 59.661 61.111 0.00 0.00 0.00 5.80
2002 2029 2.050442 CGCAAAAGACAACGGGGC 60.050 61.111 0.00 0.00 0.00 5.80
2003 2030 0.593773 CAACGCAAAAGACAACGGGG 60.594 55.000 0.00 0.00 0.00 5.73
2004 2031 0.378962 TCAACGCAAAAGACAACGGG 59.621 50.000 0.00 0.00 0.00 5.28
2005 2032 2.399396 ATCAACGCAAAAGACAACGG 57.601 45.000 0.00 0.00 0.00 4.44
2006 2033 3.788694 TGAAATCAACGCAAAAGACAACG 59.211 39.130 0.00 0.00 0.00 4.10
2007 2034 4.026886 GGTGAAATCAACGCAAAAGACAAC 60.027 41.667 0.00 0.00 0.00 3.32
2008 2035 4.109050 GGTGAAATCAACGCAAAAGACAA 58.891 39.130 0.00 0.00 0.00 3.18
2009 2036 3.129462 TGGTGAAATCAACGCAAAAGACA 59.871 39.130 0.00 0.00 36.03 3.41
2010 2037 3.701241 TGGTGAAATCAACGCAAAAGAC 58.299 40.909 0.00 0.00 36.03 3.01
2011 2038 4.582701 ATGGTGAAATCAACGCAAAAGA 57.417 36.364 0.00 0.00 36.03 2.52
2012 2039 5.006552 ACAAATGGTGAAATCAACGCAAAAG 59.993 36.000 0.00 0.00 36.03 2.27
2013 2040 4.872691 ACAAATGGTGAAATCAACGCAAAA 59.127 33.333 0.00 0.00 36.03 2.44
2014 2041 4.437239 ACAAATGGTGAAATCAACGCAAA 58.563 34.783 0.00 0.00 36.03 3.68
2015 2042 4.052159 ACAAATGGTGAAATCAACGCAA 57.948 36.364 0.00 0.00 36.03 4.85
2016 2043 3.724508 ACAAATGGTGAAATCAACGCA 57.275 38.095 0.00 0.00 36.03 5.24
2017 2044 4.794169 AGTACAAATGGTGAAATCAACGC 58.206 39.130 0.00 0.00 36.03 4.84
2018 2045 6.079763 CAGAGTACAAATGGTGAAATCAACG 58.920 40.000 0.00 0.00 36.03 4.10
2019 2046 6.016276 ACCAGAGTACAAATGGTGAAATCAAC 60.016 38.462 13.90 0.00 45.53 3.18
2020 2047 6.068010 ACCAGAGTACAAATGGTGAAATCAA 58.932 36.000 13.90 0.00 45.53 2.57
2021 2048 5.630121 ACCAGAGTACAAATGGTGAAATCA 58.370 37.500 13.90 0.00 45.53 2.57
2029 2056 5.336690 CCCAAAATGACCAGAGTACAAATGG 60.337 44.000 8.91 8.91 40.10 3.16
2030 2057 5.713025 CCCAAAATGACCAGAGTACAAATG 58.287 41.667 0.00 0.00 0.00 2.32
2031 2058 4.220602 GCCCAAAATGACCAGAGTACAAAT 59.779 41.667 0.00 0.00 0.00 2.32
2032 2059 3.572255 GCCCAAAATGACCAGAGTACAAA 59.428 43.478 0.00 0.00 0.00 2.83
2033 2060 3.153919 GCCCAAAATGACCAGAGTACAA 58.846 45.455 0.00 0.00 0.00 2.41
2034 2061 2.554344 GGCCCAAAATGACCAGAGTACA 60.554 50.000 0.00 0.00 0.00 2.90
2035 2062 2.092323 GGCCCAAAATGACCAGAGTAC 58.908 52.381 0.00 0.00 0.00 2.73
2036 2063 1.992557 AGGCCCAAAATGACCAGAGTA 59.007 47.619 0.00 0.00 0.00 2.59
2037 2064 0.779997 AGGCCCAAAATGACCAGAGT 59.220 50.000 0.00 0.00 0.00 3.24
2038 2065 1.928868 AAGGCCCAAAATGACCAGAG 58.071 50.000 0.00 0.00 0.00 3.35
2039 2066 2.397044 AAAGGCCCAAAATGACCAGA 57.603 45.000 0.00 0.00 0.00 3.86
2040 2067 2.634453 AGAAAAGGCCCAAAATGACCAG 59.366 45.455 0.00 0.00 0.00 4.00
2041 2068 2.688477 AGAAAAGGCCCAAAATGACCA 58.312 42.857 0.00 0.00 0.00 4.02
2042 2069 4.882842 TTAGAAAAGGCCCAAAATGACC 57.117 40.909 0.00 0.00 0.00 4.02
2051 2078 9.764363 CCTGAATTTATATTTTAGAAAAGGCCC 57.236 33.333 0.00 0.00 0.00 5.80
2057 2084 9.998752 TCCCCACCTGAATTTATATTTTAGAAA 57.001 29.630 0.00 0.00 0.00 2.52
2058 2085 9.998752 TTCCCCACCTGAATTTATATTTTAGAA 57.001 29.630 0.00 0.00 0.00 2.10
2059 2086 9.416284 GTTCCCCACCTGAATTTATATTTTAGA 57.584 33.333 0.00 0.00 0.00 2.10
2060 2087 8.638873 GGTTCCCCACCTGAATTTATATTTTAG 58.361 37.037 0.00 0.00 43.29 1.85
2061 2088 8.541899 GGTTCCCCACCTGAATTTATATTTTA 57.458 34.615 0.00 0.00 43.29 1.52
2062 2089 7.432148 GGTTCCCCACCTGAATTTATATTTT 57.568 36.000 0.00 0.00 43.29 1.82
2081 2108 0.778083 AAACAAGGGGGAGAGGTTCC 59.222 55.000 0.00 0.00 46.00 3.62
2082 2109 3.801307 TTAAACAAGGGGGAGAGGTTC 57.199 47.619 0.00 0.00 0.00 3.62
2083 2110 4.546224 TTTTAAACAAGGGGGAGAGGTT 57.454 40.909 0.00 0.00 0.00 3.50
2084 2111 4.759793 ATTTTAAACAAGGGGGAGAGGT 57.240 40.909 0.00 0.00 0.00 3.85
2085 2112 7.015779 TGTTTTATTTTAAACAAGGGGGAGAGG 59.984 37.037 0.00 0.00 43.07 3.69
2086 2113 7.958088 TGTTTTATTTTAAACAAGGGGGAGAG 58.042 34.615 0.00 0.00 43.07 3.20
2087 2114 7.015779 CCTGTTTTATTTTAAACAAGGGGGAGA 59.984 37.037 0.00 0.00 44.72 3.71
2088 2115 7.158697 CCTGTTTTATTTTAAACAAGGGGGAG 58.841 38.462 0.00 0.00 44.72 4.30
2089 2116 6.464607 GCCTGTTTTATTTTAAACAAGGGGGA 60.465 38.462 0.00 0.00 44.72 4.81
2090 2117 5.703592 GCCTGTTTTATTTTAAACAAGGGGG 59.296 40.000 0.00 0.00 44.72 5.40
2091 2118 6.530120 AGCCTGTTTTATTTTAAACAAGGGG 58.470 36.000 0.00 0.00 44.72 4.79
2092 2119 9.150348 CATAGCCTGTTTTATTTTAAACAAGGG 57.850 33.333 0.00 0.00 44.72 3.95
2093 2120 9.150348 CCATAGCCTGTTTTATTTTAAACAAGG 57.850 33.333 0.00 0.00 44.72 3.61
2094 2121 9.705290 ACCATAGCCTGTTTTATTTTAAACAAG 57.295 29.630 0.00 0.00 44.72 3.16
2095 2122 9.482627 CACCATAGCCTGTTTTATTTTAAACAA 57.517 29.630 0.00 0.00 44.72 2.83
2096 2123 8.643324 ACACCATAGCCTGTTTTATTTTAAACA 58.357 29.630 0.00 0.00 43.62 2.83
2097 2124 9.135843 GACACCATAGCCTGTTTTATTTTAAAC 57.864 33.333 0.00 0.00 38.26 2.01
2098 2125 8.861086 TGACACCATAGCCTGTTTTATTTTAAA 58.139 29.630 0.00 0.00 0.00 1.52
2099 2126 8.410673 TGACACCATAGCCTGTTTTATTTTAA 57.589 30.769 0.00 0.00 0.00 1.52
2100 2127 8.410673 TTGACACCATAGCCTGTTTTATTTTA 57.589 30.769 0.00 0.00 0.00 1.52
2101 2128 6.909550 TGACACCATAGCCTGTTTTATTTT 57.090 33.333 0.00 0.00 0.00 1.82
2102 2129 6.493458 ACTTGACACCATAGCCTGTTTTATTT 59.507 34.615 0.00 0.00 0.00 1.40
2103 2130 6.010219 ACTTGACACCATAGCCTGTTTTATT 58.990 36.000 0.00 0.00 0.00 1.40
2104 2131 5.570320 ACTTGACACCATAGCCTGTTTTAT 58.430 37.500 0.00 0.00 0.00 1.40
2105 2132 4.980573 ACTTGACACCATAGCCTGTTTTA 58.019 39.130 0.00 0.00 0.00 1.52
2106 2133 3.832527 ACTTGACACCATAGCCTGTTTT 58.167 40.909 0.00 0.00 0.00 2.43
2107 2134 3.508845 ACTTGACACCATAGCCTGTTT 57.491 42.857 0.00 0.00 0.00 2.83
2108 2135 3.583086 ACTACTTGACACCATAGCCTGTT 59.417 43.478 0.00 0.00 0.00 3.16
2109 2136 3.173965 ACTACTTGACACCATAGCCTGT 58.826 45.455 0.00 0.00 0.00 4.00
2110 2137 3.895232 ACTACTTGACACCATAGCCTG 57.105 47.619 0.00 0.00 0.00 4.85
2111 2138 5.459505 AGATACTACTTGACACCATAGCCT 58.540 41.667 0.00 0.00 0.00 4.58
2112 2139 5.793030 AGATACTACTTGACACCATAGCC 57.207 43.478 0.00 0.00 0.00 3.93
2113 2140 7.713750 TGTTAGATACTACTTGACACCATAGC 58.286 38.462 0.00 0.00 0.00 2.97
2114 2141 9.684448 CATGTTAGATACTACTTGACACCATAG 57.316 37.037 0.00 0.00 0.00 2.23
2115 2142 8.638873 CCATGTTAGATACTACTTGACACCATA 58.361 37.037 0.00 0.00 0.00 2.74
2116 2143 7.500992 CCATGTTAGATACTACTTGACACCAT 58.499 38.462 0.00 0.00 0.00 3.55
2117 2144 6.629515 GCCATGTTAGATACTACTTGACACCA 60.630 42.308 0.00 0.00 0.00 4.17
2118 2145 5.753921 GCCATGTTAGATACTACTTGACACC 59.246 44.000 0.00 0.00 0.00 4.16
2119 2146 6.574350 AGCCATGTTAGATACTACTTGACAC 58.426 40.000 0.00 0.00 0.00 3.67
2120 2147 6.791867 AGCCATGTTAGATACTACTTGACA 57.208 37.500 0.00 0.00 0.00 3.58
2121 2148 7.466050 GCAAAGCCATGTTAGATACTACTTGAC 60.466 40.741 0.00 0.00 0.00 3.18
2122 2149 6.538742 GCAAAGCCATGTTAGATACTACTTGA 59.461 38.462 0.00 0.00 0.00 3.02
2123 2150 6.316140 TGCAAAGCCATGTTAGATACTACTTG 59.684 38.462 0.00 0.00 0.00 3.16
2124 2151 6.316390 GTGCAAAGCCATGTTAGATACTACTT 59.684 38.462 0.00 0.00 0.00 2.24
2125 2152 5.817816 GTGCAAAGCCATGTTAGATACTACT 59.182 40.000 0.00 0.00 0.00 2.57
2126 2153 5.817816 AGTGCAAAGCCATGTTAGATACTAC 59.182 40.000 0.00 0.00 0.00 2.73
2127 2154 5.989477 AGTGCAAAGCCATGTTAGATACTA 58.011 37.500 0.00 0.00 0.00 1.82
2128 2155 4.848357 AGTGCAAAGCCATGTTAGATACT 58.152 39.130 0.00 0.00 0.00 2.12
2129 2156 5.817816 AGTAGTGCAAAGCCATGTTAGATAC 59.182 40.000 0.00 0.00 0.00 2.24
2130 2157 5.989477 AGTAGTGCAAAGCCATGTTAGATA 58.011 37.500 0.00 0.00 0.00 1.98
2131 2158 4.848357 AGTAGTGCAAAGCCATGTTAGAT 58.152 39.130 0.00 0.00 0.00 1.98
2132 2159 4.286297 AGTAGTGCAAAGCCATGTTAGA 57.714 40.909 0.00 0.00 0.00 2.10
2133 2160 4.697352 AGAAGTAGTGCAAAGCCATGTTAG 59.303 41.667 0.00 0.00 0.00 2.34
2134 2161 4.651778 AGAAGTAGTGCAAAGCCATGTTA 58.348 39.130 0.00 0.00 0.00 2.41
2135 2162 3.490348 AGAAGTAGTGCAAAGCCATGTT 58.510 40.909 0.00 0.00 0.00 2.71
2136 2163 3.077359 GAGAAGTAGTGCAAAGCCATGT 58.923 45.455 0.00 0.00 0.00 3.21
2137 2164 3.076621 TGAGAAGTAGTGCAAAGCCATG 58.923 45.455 0.00 0.00 0.00 3.66
2138 2165 3.341823 CTGAGAAGTAGTGCAAAGCCAT 58.658 45.455 0.00 0.00 0.00 4.40
2139 2166 2.550855 CCTGAGAAGTAGTGCAAAGCCA 60.551 50.000 0.00 0.00 0.00 4.75
2140 2167 2.079925 CCTGAGAAGTAGTGCAAAGCC 58.920 52.381 0.00 0.00 0.00 4.35
2141 2168 2.079925 CCCTGAGAAGTAGTGCAAAGC 58.920 52.381 0.00 0.00 0.00 3.51
2142 2169 2.079925 GCCCTGAGAAGTAGTGCAAAG 58.920 52.381 0.00 0.00 0.00 2.77
2143 2170 1.419762 TGCCCTGAGAAGTAGTGCAAA 59.580 47.619 0.00 0.00 0.00 3.68
2144 2171 1.055849 TGCCCTGAGAAGTAGTGCAA 58.944 50.000 0.00 0.00 0.00 4.08
2145 2172 1.065926 CATGCCCTGAGAAGTAGTGCA 60.066 52.381 0.00 0.00 33.24 4.57
2146 2173 1.661341 CATGCCCTGAGAAGTAGTGC 58.339 55.000 0.00 0.00 0.00 4.40
2147 2174 1.745141 GCCATGCCCTGAGAAGTAGTG 60.745 57.143 0.00 0.00 0.00 2.74
2148 2175 0.543749 GCCATGCCCTGAGAAGTAGT 59.456 55.000 0.00 0.00 0.00 2.73
2149 2176 0.543277 TGCCATGCCCTGAGAAGTAG 59.457 55.000 0.00 0.00 0.00 2.57
2150 2177 1.141657 GATGCCATGCCCTGAGAAGTA 59.858 52.381 0.00 0.00 0.00 2.24
2151 2178 0.106819 GATGCCATGCCCTGAGAAGT 60.107 55.000 0.00 0.00 0.00 3.01
2152 2179 0.183014 AGATGCCATGCCCTGAGAAG 59.817 55.000 0.00 0.00 0.00 2.85
2153 2180 0.106868 CAGATGCCATGCCCTGAGAA 60.107 55.000 0.00 0.00 32.68 2.87
2154 2181 1.530283 CAGATGCCATGCCCTGAGA 59.470 57.895 0.00 0.00 32.68 3.27
2155 2182 1.528542 CCAGATGCCATGCCCTGAG 60.529 63.158 7.01 0.00 32.68 3.35
2156 2183 2.599032 CCAGATGCCATGCCCTGA 59.401 61.111 7.01 0.00 32.68 3.86
2157 2184 2.520982 CCCAGATGCCATGCCCTG 60.521 66.667 0.00 0.00 0.00 4.45
2158 2185 4.534824 GCCCAGATGCCATGCCCT 62.535 66.667 0.00 0.00 0.00 5.19
2166 2193 0.740737 GTACATTGTGGCCCAGATGC 59.259 55.000 0.00 0.00 0.00 3.91
2167 2194 1.016627 CGTACATTGTGGCCCAGATG 58.983 55.000 0.00 3.89 0.00 2.90
2168 2195 0.908910 TCGTACATTGTGGCCCAGAT 59.091 50.000 0.00 0.00 0.00 2.90
2169 2196 0.036765 GTCGTACATTGTGGCCCAGA 60.037 55.000 0.00 0.00 0.00 3.86
2170 2197 0.321210 TGTCGTACATTGTGGCCCAG 60.321 55.000 0.00 0.00 0.00 4.45
2171 2198 0.326595 ATGTCGTACATTGTGGCCCA 59.673 50.000 0.00 0.00 34.67 5.36
2172 2199 1.014352 GATGTCGTACATTGTGGCCC 58.986 55.000 0.00 0.00 39.27 5.80
2173 2200 0.650512 CGATGTCGTACATTGTGGCC 59.349 55.000 0.00 0.00 39.27 5.36
2174 2201 0.026285 GCGATGTCGTACATTGTGGC 59.974 55.000 13.37 7.35 41.12 5.01
2175 2202 1.324435 CAGCGATGTCGTACATTGTGG 59.676 52.381 13.37 0.00 41.12 4.17
2176 2203 1.324435 CCAGCGATGTCGTACATTGTG 59.676 52.381 0.00 10.83 41.12 3.33
2177 2204 1.640428 CCAGCGATGTCGTACATTGT 58.360 50.000 0.00 0.00 41.12 2.71
2178 2205 0.301687 GCCAGCGATGTCGTACATTG 59.698 55.000 0.00 9.57 39.27 2.82
2179 2206 1.145759 CGCCAGCGATGTCGTACATT 61.146 55.000 6.06 0.00 39.27 2.71
2180 2207 1.588932 CGCCAGCGATGTCGTACAT 60.589 57.895 6.06 0.91 42.43 2.29
2181 2208 2.202557 CGCCAGCGATGTCGTACA 60.203 61.111 6.06 0.00 42.83 2.90
2182 2209 3.617538 GCGCCAGCGATGTCGTAC 61.618 66.667 17.53 0.00 42.83 3.67
2192 2219 3.207669 CATGGAGGAAGCGCCAGC 61.208 66.667 2.29 0.00 45.58 4.85
2193 2220 2.515523 CCATGGAGGAAGCGCCAG 60.516 66.667 5.56 0.00 41.22 4.85
2194 2221 4.802051 GCCATGGAGGAAGCGCCA 62.802 66.667 18.40 0.00 41.22 5.69
2195 2222 4.496336 AGCCATGGAGGAAGCGCC 62.496 66.667 18.40 0.00 41.22 6.53
2196 2223 2.439156 AAGCCATGGAGGAAGCGC 60.439 61.111 18.40 0.00 41.22 5.92
2197 2224 0.393537 AAGAAGCCATGGAGGAAGCG 60.394 55.000 18.40 0.00 41.22 4.68
2198 2225 1.387539 GAAGAAGCCATGGAGGAAGC 58.612 55.000 18.40 0.00 41.22 3.86
2199 2226 1.563410 AGGAAGAAGCCATGGAGGAAG 59.437 52.381 18.40 0.00 41.22 3.46
2200 2227 1.561542 GAGGAAGAAGCCATGGAGGAA 59.438 52.381 18.40 0.00 41.22 3.36
2201 2228 1.207791 GAGGAAGAAGCCATGGAGGA 58.792 55.000 18.40 0.00 41.22 3.71
2202 2229 0.914644 TGAGGAAGAAGCCATGGAGG 59.085 55.000 18.40 0.00 41.84 4.30
2203 2230 2.641305 CTTGAGGAAGAAGCCATGGAG 58.359 52.381 18.40 0.00 0.00 3.86
2204 2231 1.340405 GCTTGAGGAAGAAGCCATGGA 60.340 52.381 18.40 0.00 40.03 3.41
2205 2232 1.101331 GCTTGAGGAAGAAGCCATGG 58.899 55.000 7.63 7.63 40.03 3.66
2210 2237 1.746991 CCGGGCTTGAGGAAGAAGC 60.747 63.158 0.00 0.00 44.32 3.86
2211 2238 0.391793 GACCGGGCTTGAGGAAGAAG 60.392 60.000 6.32 0.00 0.00 2.85
2212 2239 1.125093 TGACCGGGCTTGAGGAAGAA 61.125 55.000 9.82 0.00 0.00 2.52
2213 2240 1.535444 TGACCGGGCTTGAGGAAGA 60.535 57.895 9.82 0.00 0.00 2.87
2214 2241 1.078848 CTGACCGGGCTTGAGGAAG 60.079 63.158 9.82 0.00 0.00 3.46
2215 2242 0.909610 ATCTGACCGGGCTTGAGGAA 60.910 55.000 9.82 0.00 0.00 3.36
2216 2243 1.306141 ATCTGACCGGGCTTGAGGA 60.306 57.895 9.82 0.00 0.00 3.71
2217 2244 1.144936 GATCTGACCGGGCTTGAGG 59.855 63.158 9.82 0.00 0.00 3.86
2218 2245 1.144936 GGATCTGACCGGGCTTGAG 59.855 63.158 9.82 0.00 0.00 3.02
2219 2246 1.306141 AGGATCTGACCGGGCTTGA 60.306 57.895 9.82 7.57 34.73 3.02
2220 2247 1.153289 CAGGATCTGACCGGGCTTG 60.153 63.158 9.82 0.61 32.44 4.01
2221 2248 3.036429 GCAGGATCTGACCGGGCTT 62.036 63.158 9.82 0.00 32.44 4.35
2222 2249 3.474570 GCAGGATCTGACCGGGCT 61.475 66.667 9.82 0.00 32.44 5.19
2223 2250 3.329542 TTGCAGGATCTGACCGGGC 62.330 63.158 6.32 1.57 36.30 6.13
2224 2251 1.450312 GTTGCAGGATCTGACCGGG 60.450 63.158 6.32 0.00 32.44 5.73
2225 2252 1.450312 GGTTGCAGGATCTGACCGG 60.450 63.158 0.00 0.00 32.44 5.28
2226 2253 0.321564 TTGGTTGCAGGATCTGACCG 60.322 55.000 0.00 0.00 32.94 4.79
2227 2254 1.168714 GTTGGTTGCAGGATCTGACC 58.831 55.000 0.00 0.00 32.44 4.02
2228 2255 2.191128 AGTTGGTTGCAGGATCTGAC 57.809 50.000 0.00 0.00 32.44 3.51
2229 2256 2.906389 AGTAGTTGGTTGCAGGATCTGA 59.094 45.455 0.00 0.00 32.44 3.27
2230 2257 3.005554 CAGTAGTTGGTTGCAGGATCTG 58.994 50.000 0.00 0.00 34.12 2.90
2231 2258 2.906389 TCAGTAGTTGGTTGCAGGATCT 59.094 45.455 0.00 0.00 0.00 2.75
2232 2259 3.265791 CTCAGTAGTTGGTTGCAGGATC 58.734 50.000 0.00 0.00 0.00 3.36
2233 2260 2.639839 ACTCAGTAGTTGGTTGCAGGAT 59.360 45.455 0.00 0.00 29.00 3.24
2234 2261 2.037251 GACTCAGTAGTTGGTTGCAGGA 59.963 50.000 0.00 0.00 35.56 3.86
2235 2262 2.037772 AGACTCAGTAGTTGGTTGCAGG 59.962 50.000 0.00 0.00 35.56 4.85
2236 2263 3.393089 AGACTCAGTAGTTGGTTGCAG 57.607 47.619 0.00 0.00 35.56 4.41
2237 2264 3.388024 AGAAGACTCAGTAGTTGGTTGCA 59.612 43.478 0.00 0.00 35.56 4.08
2238 2265 3.996480 AGAAGACTCAGTAGTTGGTTGC 58.004 45.455 0.00 0.00 35.56 4.17
2239 2266 5.715070 CCTAGAAGACTCAGTAGTTGGTTG 58.285 45.833 0.00 0.00 35.56 3.77
2240 2267 4.221041 GCCTAGAAGACTCAGTAGTTGGTT 59.779 45.833 0.00 0.00 35.56 3.67
2241 2268 3.764972 GCCTAGAAGACTCAGTAGTTGGT 59.235 47.826 0.00 0.00 35.56 3.67
2242 2269 3.181495 CGCCTAGAAGACTCAGTAGTTGG 60.181 52.174 0.00 0.00 35.56 3.77
2243 2270 3.732471 GCGCCTAGAAGACTCAGTAGTTG 60.732 52.174 0.00 0.00 35.56 3.16
2244 2271 2.424246 GCGCCTAGAAGACTCAGTAGTT 59.576 50.000 0.00 0.00 35.56 2.24
2245 2272 2.018515 GCGCCTAGAAGACTCAGTAGT 58.981 52.381 0.00 0.00 39.21 2.73
2246 2273 2.294074 AGCGCCTAGAAGACTCAGTAG 58.706 52.381 2.29 0.00 0.00 2.57
2247 2274 2.421751 AGCGCCTAGAAGACTCAGTA 57.578 50.000 2.29 0.00 0.00 2.74
2248 2275 1.474879 GAAGCGCCTAGAAGACTCAGT 59.525 52.381 2.29 0.00 0.00 3.41
2249 2276 1.474478 TGAAGCGCCTAGAAGACTCAG 59.526 52.381 2.29 0.00 0.00 3.35
2250 2277 1.545841 TGAAGCGCCTAGAAGACTCA 58.454 50.000 2.29 0.00 0.00 3.41
2251 2278 2.535331 CTTGAAGCGCCTAGAAGACTC 58.465 52.381 2.29 0.00 0.00 3.36
2252 2279 1.205893 CCTTGAAGCGCCTAGAAGACT 59.794 52.381 2.29 0.00 0.00 3.24
2253 2280 1.066787 ACCTTGAAGCGCCTAGAAGAC 60.067 52.381 2.29 0.00 0.00 3.01
2254 2281 1.066858 CACCTTGAAGCGCCTAGAAGA 60.067 52.381 2.29 0.00 0.00 2.87
2255 2282 1.363744 CACCTTGAAGCGCCTAGAAG 58.636 55.000 2.29 1.04 0.00 2.85
2256 2283 0.036388 CCACCTTGAAGCGCCTAGAA 60.036 55.000 2.29 0.00 0.00 2.10
2257 2284 1.596934 CCACCTTGAAGCGCCTAGA 59.403 57.895 2.29 0.00 0.00 2.43
2258 2285 1.450312 CCCACCTTGAAGCGCCTAG 60.450 63.158 2.29 0.00 0.00 3.02
2259 2286 2.668632 CCCACCTTGAAGCGCCTA 59.331 61.111 2.29 0.00 0.00 3.93
2264 2291 4.954933 TATCGCCCACCTTGAAGC 57.045 55.556 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.