Multiple sequence alignment - TraesCS7D01G441200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G441200 chr7D 100.000 7854 0 0 1 7854 560746957 560754810 0.000000e+00 14504.0
1 TraesCS7D01G441200 chr7D 89.855 69 6 1 7404 7472 560754277 560754344 3.900000e-13 87.9
2 TraesCS7D01G441200 chr7D 89.855 69 6 1 7321 7388 560754360 560754428 3.900000e-13 87.9
3 TraesCS7D01G441200 chr7B 92.303 5145 267 44 801 5887 608713725 608718798 0.000000e+00 7188.0
4 TraesCS7D01G441200 chr7B 88.394 1189 84 19 6164 7317 608719170 608720339 0.000000e+00 1382.0
5 TraesCS7D01G441200 chr7B 87.062 742 58 15 1 708 608712834 608713571 0.000000e+00 804.0
6 TraesCS7D01G441200 chr7B 94.737 152 7 1 7345 7496 608720565 608720715 1.320000e-57 235.0
7 TraesCS7D01G441200 chr7B 87.719 171 16 3 5876 6045 608718817 608718983 2.240000e-45 195.0
8 TraesCS7D01G441200 chr7B 90.411 73 6 1 7317 7388 608720620 608720692 2.330000e-15 95.3
9 TraesCS7D01G441200 chr7A 94.731 3340 127 25 801 4106 645022736 645026060 0.000000e+00 5147.0
10 TraesCS7D01G441200 chr7A 92.350 2013 87 29 5036 6999 645027219 645029213 0.000000e+00 2802.0
11 TraesCS7D01G441200 chr7A 94.858 953 28 7 4105 5037 645026164 645027115 0.000000e+00 1469.0
12 TraesCS7D01G441200 chr7A 95.098 714 22 7 1 708 645021874 645022580 0.000000e+00 1112.0
13 TraesCS7D01G441200 chr7A 89.015 264 22 5 7028 7284 645029212 645029475 3.540000e-83 320.0
14 TraesCS7D01G441200 chr7A 88.073 109 8 5 718 823 645022622 645022728 2.980000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G441200 chr7D 560746957 560754810 7853 False 4893.266667 14504 93.236667 1 7854 3 chr7D.!!$F1 7853
1 TraesCS7D01G441200 chr7B 608712834 608720715 7881 False 1649.883333 7188 90.104333 1 7496 6 chr7B.!!$F1 7495
2 TraesCS7D01G441200 chr7A 645021874 645029475 7601 False 1829.000000 5147 92.354167 1 7284 6 chr7A.!!$F1 7283

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
923 1026 0.310854 CGGCCCATTTTTATCTCGGC 59.689 55.0 0.00 0.00 35.60 5.54 F
1793 1903 0.886490 AACTGACAAGAGCGCCCTTG 60.886 55.0 27.63 27.63 46.61 3.61 F
3237 3355 0.396435 AAGATGCCACCACGTTCTCA 59.604 50.0 0.00 0.00 0.00 3.27 F
4938 5218 0.396811 ACCTTGACGAGAACTTGGGG 59.603 55.0 0.00 0.00 0.00 4.96 F
6223 6735 0.597377 GCTGGTCCTTGCGGTTTTTG 60.597 55.0 0.00 0.00 0.00 2.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1837 1947 1.024271 GCTTGGAAGCCATATCGCAA 58.976 50.0 0.00 0.00 46.20 4.85 R
3499 3633 0.810648 TTGGAAAGGTCGATGCATGC 59.189 50.0 11.82 11.82 0.00 4.06 R
5202 5589 0.116940 ACATTTGCCCCAGGGAATGT 59.883 50.0 15.51 15.51 37.67 2.71 R
6412 6934 0.469917 TAGCTGCTGGCCCTATTGAC 59.530 55.0 13.43 0.00 43.05 3.18 R
7336 7906 0.104986 ATCCATCGACCTCCATGGGA 60.105 55.0 13.02 0.24 40.21 4.37 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.933492 GCGGTGTTGCATGTAGGAGTTA 60.933 50.000 0.00 0.00 34.15 2.24
45 46 3.556213 GGAGTTAAAATTGGGGGCAACAC 60.556 47.826 0.00 0.00 42.03 3.32
76 77 8.428063 TGGAATTTCTTGTTGTTTCCATGTATT 58.572 29.630 0.00 0.00 40.57 1.89
134 135 4.343239 GCCTATTCATTTGATCTTTGGCCT 59.657 41.667 3.32 0.00 0.00 5.19
262 297 2.227149 GGTTTGGTAAATTCGTTCGCCT 59.773 45.455 0.00 0.00 0.00 5.52
319 354 0.961857 TTGCTCGCCACATGCTCAAT 60.962 50.000 0.00 0.00 38.05 2.57
342 377 5.234466 ACAGAATGATAATCCACCCTAGC 57.766 43.478 0.00 0.00 39.69 3.42
562 600 4.955811 TCGGCAATGTAACATCCTCTAT 57.044 40.909 0.00 0.00 0.00 1.98
676 714 0.692756 CCCCCTCTTCCTTCCTCCTC 60.693 65.000 0.00 0.00 0.00 3.71
678 716 0.341609 CCCTCTTCCTTCCTCCTCCT 59.658 60.000 0.00 0.00 0.00 3.69
679 717 1.494960 CCTCTTCCTTCCTCCTCCTG 58.505 60.000 0.00 0.00 0.00 3.86
680 718 0.829990 CTCTTCCTTCCTCCTCCTGC 59.170 60.000 0.00 0.00 0.00 4.85
681 719 0.972983 TCTTCCTTCCTCCTCCTGCG 60.973 60.000 0.00 0.00 0.00 5.18
715 785 0.394488 TCCGCCTTCCACAACAAACA 60.394 50.000 0.00 0.00 0.00 2.83
716 786 0.457851 CCGCCTTCCACAACAAACAA 59.542 50.000 0.00 0.00 0.00 2.83
779 852 7.609097 TCCTCTCATGCTATGAAATCTTAGT 57.391 36.000 5.54 0.00 39.11 2.24
853 955 3.352648 ACCTGACGTGATAAAAATGGGG 58.647 45.455 0.00 0.00 0.00 4.96
885 987 3.965539 CTGCCCAGCCTCTTCACCG 62.966 68.421 0.00 0.00 0.00 4.94
919 1021 3.443681 CACTGTTCGGCCCATTTTTATCT 59.556 43.478 0.00 0.00 0.00 1.98
923 1026 0.310854 CGGCCCATTTTTATCTCGGC 59.689 55.000 0.00 0.00 35.60 5.54
932 1035 2.319890 TTTATCTCGGCCGGCCCTTC 62.320 60.000 39.24 15.59 0.00 3.46
951 1054 4.658786 AGTTCCTGGGCCGGTCCT 62.659 66.667 28.64 0.12 34.39 3.85
1299 1405 2.626743 ACCTGGTATACTCCATACGCAC 59.373 50.000 0.00 0.00 40.51 5.34
1483 1592 1.056700 AAGTCTGGGTGGTCTGCTGT 61.057 55.000 0.00 0.00 0.00 4.40
1510 1619 5.123979 GTCCAAAAGGATGGTATTCTGTGAC 59.876 44.000 0.00 0.00 41.46 3.67
1574 1684 7.949434 AGCATTCTTTTCAAGAGATTCAAGTT 58.051 30.769 0.00 0.00 39.03 2.66
1637 1747 2.920076 TATTTGCGGGGGACATGGCC 62.920 60.000 10.00 10.00 0.00 5.36
1661 1771 4.392138 GGCAGTGTAAGATTCTGGTTGTAC 59.608 45.833 0.00 0.00 0.00 2.90
1691 1801 5.221722 GGAACAAGAGGTATCAGATGCCATA 60.222 44.000 18.93 0.00 37.52 2.74
1717 1827 2.095567 CCGCAGAGAACACTGAAAATGG 60.096 50.000 0.00 0.00 39.94 3.16
1727 1837 1.216678 ACTGAAAATGGTGTGGTGGGA 59.783 47.619 0.00 0.00 0.00 4.37
1787 1897 1.783284 TGTAGCAACTGACAAGAGCG 58.217 50.000 0.00 0.00 34.59 5.03
1793 1903 0.886490 AACTGACAAGAGCGCCCTTG 60.886 55.000 27.63 27.63 46.61 3.61
1841 1951 3.689161 TGGAACAAGAGGTATCAATTGCG 59.311 43.478 0.00 0.00 31.92 4.85
1877 1987 4.453819 AGCTTATGCAGAGAACACTGAAAC 59.546 41.667 3.16 0.00 42.74 2.78
1997 2111 8.159447 TGGCATCATTCTGCTATTTCTAGTTAT 58.841 33.333 0.00 0.00 41.95 1.89
1998 2112 9.658799 GGCATCATTCTGCTATTTCTAGTTATA 57.341 33.333 0.00 0.00 41.95 0.98
2103 2217 8.334263 TGATATTTTCTTTACATGTGCAGACA 57.666 30.769 9.11 0.00 36.22 3.41
2331 2445 4.513442 ACTCGTCCTATTTGCATTGCTTA 58.487 39.130 10.49 0.00 0.00 3.09
2638 2753 0.451783 CTTGGCGGTATTGGAGTTGC 59.548 55.000 0.00 0.00 0.00 4.17
2643 2758 1.663695 CGGTATTGGAGTTGCGGAAT 58.336 50.000 0.00 0.00 0.00 3.01
2736 2851 3.138884 TGTTGCAAGTGCTGGATCTAA 57.861 42.857 0.00 0.00 42.66 2.10
2905 3020 6.773685 AGGTTGTGGTAAGCTTACATGTTTTA 59.226 34.615 31.98 12.21 35.37 1.52
2935 3050 8.585881 GTTGCCTTGTCTCTATATAACTCCATA 58.414 37.037 0.00 0.00 0.00 2.74
2937 3052 9.990868 TGCCTTGTCTCTATATAACTCCATATA 57.009 33.333 0.00 0.00 0.00 0.86
3237 3355 0.396435 AAGATGCCACCACGTTCTCA 59.604 50.000 0.00 0.00 0.00 3.27
3244 3362 1.616865 CCACCACGTTCTCAAGGTAGA 59.383 52.381 0.00 0.00 32.01 2.59
3300 3420 1.672881 GTGTCACATGCTTCCCATAGC 59.327 52.381 0.00 0.00 41.59 2.97
3499 3633 8.687242 TCCACTCAGTTAACTCTAGATGTTATG 58.313 37.037 17.48 10.19 31.13 1.90
3572 3706 5.119694 GCCTAAGAAGAAAGTAGATGGTGG 58.880 45.833 0.00 0.00 0.00 4.61
3718 3861 4.467795 TCTCATTAGCATATAGGTGGAGCC 59.532 45.833 0.00 0.00 37.58 4.70
3963 4107 6.670695 AGTTCCAACATTTTCTGCCTTAAT 57.329 33.333 0.00 0.00 0.00 1.40
4142 4395 7.894753 TCATGCTTGGGAAAATATTGACATA 57.105 32.000 0.00 0.00 0.00 2.29
4146 4399 6.321181 TGCTTGGGAAAATATTGACATAGGAC 59.679 38.462 0.00 0.00 0.00 3.85
4180 4433 1.542492 ACACGGAGATAACCAGTCGT 58.458 50.000 0.00 0.00 0.00 4.34
4198 4452 1.202417 CGTCCGTCATAAGTGCCTGAT 60.202 52.381 0.00 0.00 0.00 2.90
4332 4593 8.281194 CAGATGATATTGGACAAGAAAATCGAG 58.719 37.037 0.00 0.00 0.00 4.04
4345 4606 3.281727 AAATCGAGGAAGCAGGCATAA 57.718 42.857 0.00 0.00 0.00 1.90
4609 4887 9.646522 AAGGCATGTTCCTTTTATATGAACTAT 57.353 29.630 0.00 0.00 43.62 2.12
4610 4888 9.071276 AGGCATGTTCCTTTTATATGAACTATG 57.929 33.333 0.00 0.00 39.24 2.23
4804 5084 3.127548 CCAGTGTGAATGCTGGTAATGAC 59.872 47.826 2.66 0.00 45.28 3.06
4849 5129 0.462581 GCCCAGATGATCAGCGACAA 60.463 55.000 5.12 0.00 0.00 3.18
4938 5218 0.396811 ACCTTGACGAGAACTTGGGG 59.603 55.000 0.00 0.00 0.00 4.96
4985 5265 6.608808 ACCAGCATTTTTCTAGCCATCTTAAT 59.391 34.615 0.00 0.00 0.00 1.40
4988 5268 6.510536 GCATTTTTCTAGCCATCTTAATGCT 58.489 36.000 0.00 0.00 41.84 3.79
5090 5475 5.045651 TCTCATGTGTCCACAAGGTATTCAT 60.046 40.000 3.95 0.00 45.41 2.57
5091 5476 6.156083 TCTCATGTGTCCACAAGGTATTCATA 59.844 38.462 3.95 0.00 45.41 2.15
5100 5485 8.082242 GTCCACAAGGTATTCATATTAAATGGC 58.918 37.037 0.00 0.00 35.89 4.40
5102 5487 8.587608 CCACAAGGTATTCATATTAAATGGCAT 58.412 33.333 0.00 0.00 0.00 4.40
5112 5498 8.621532 TCATATTAAATGGCATCCAGTTAGAC 57.378 34.615 0.00 0.00 43.35 2.59
5173 5560 8.612619 GTGATATATTTCTTGTTCGGACACATT 58.387 33.333 0.00 0.00 34.98 2.71
5196 5583 7.473735 TTGGCCATTGTTGTCTTGAATATTA 57.526 32.000 6.09 0.00 0.00 0.98
5197 5584 7.658525 TGGCCATTGTTGTCTTGAATATTAT 57.341 32.000 0.00 0.00 0.00 1.28
5199 5586 8.538701 TGGCCATTGTTGTCTTGAATATTATTT 58.461 29.630 0.00 0.00 0.00 1.40
5200 5587 8.819974 GGCCATTGTTGTCTTGAATATTATTTG 58.180 33.333 0.00 0.00 0.00 2.32
5201 5588 9.369904 GCCATTGTTGTCTTGAATATTATTTGT 57.630 29.630 0.00 0.00 0.00 2.83
5310 5699 5.012871 AGGAGAGTGAATGGTGATGATATGG 59.987 44.000 0.00 0.00 0.00 2.74
5316 5705 4.165758 TGAATGGTGATGATATGGTCCACA 59.834 41.667 0.00 0.00 0.00 4.17
5357 5746 5.019470 TCAGAAGATGCTCTGGAGTCTTTA 58.981 41.667 1.28 0.00 42.68 1.85
5399 5788 7.037297 ACTGAATCTCTGAAGAAATTAGGGGAA 60.037 37.037 0.00 0.00 34.49 3.97
5404 5793 6.006275 TCTGAAGAAATTAGGGGAAGATGG 57.994 41.667 0.00 0.00 0.00 3.51
5499 5894 7.699391 CAGCGGATCAGCCAATTATATTTATTG 59.301 37.037 14.56 0.00 38.01 1.90
5555 5950 6.989169 ACTCAGTTGATGGCTCATTATCTTAC 59.011 38.462 0.00 0.00 0.00 2.34
5676 6071 5.111989 TCTCTTCAGGTTTGATTGATAGCG 58.888 41.667 0.00 0.00 32.27 4.26
5740 6135 1.754803 CTGCGTGTCATCTAGGGGTTA 59.245 52.381 0.00 0.00 0.00 2.85
5741 6136 2.167693 CTGCGTGTCATCTAGGGGTTAA 59.832 50.000 0.00 0.00 0.00 2.01
5742 6137 2.568062 TGCGTGTCATCTAGGGGTTAAA 59.432 45.455 0.00 0.00 0.00 1.52
5743 6138 2.934553 GCGTGTCATCTAGGGGTTAAAC 59.065 50.000 0.00 0.00 0.00 2.01
5744 6139 3.369157 GCGTGTCATCTAGGGGTTAAACT 60.369 47.826 0.00 0.00 0.00 2.66
5745 6140 4.181578 CGTGTCATCTAGGGGTTAAACTG 58.818 47.826 0.00 0.00 0.00 3.16
5746 6141 4.081862 CGTGTCATCTAGGGGTTAAACTGA 60.082 45.833 0.00 0.00 0.00 3.41
5747 6142 5.395324 CGTGTCATCTAGGGGTTAAACTGAT 60.395 44.000 0.00 0.00 0.00 2.90
5748 6143 6.183360 CGTGTCATCTAGGGGTTAAACTGATA 60.183 42.308 0.00 0.00 0.00 2.15
5749 6144 6.985059 GTGTCATCTAGGGGTTAAACTGATAC 59.015 42.308 0.00 0.00 0.00 2.24
5814 6219 5.892119 TCCGTTCTCCACTGATCTAGTTAAT 59.108 40.000 0.00 0.00 37.60 1.40
6072 6545 9.737427 AGAATCACGTACTCTTATTTCATACAG 57.263 33.333 0.00 0.00 0.00 2.74
6102 6575 1.875514 CAGCACAGCAGCTTAAGTTCA 59.124 47.619 4.02 0.00 43.70 3.18
6148 6658 4.762251 GTCATATGCCCTGGTATTTTCCTC 59.238 45.833 0.00 0.00 0.00 3.71
6159 6669 7.094334 CCCTGGTATTTTCCTCTTGTCTTTTAC 60.094 40.741 0.00 0.00 0.00 2.01
6160 6670 7.665974 CCTGGTATTTTCCTCTTGTCTTTTACT 59.334 37.037 0.00 0.00 0.00 2.24
6161 6671 9.720769 CTGGTATTTTCCTCTTGTCTTTTACTA 57.279 33.333 0.00 0.00 0.00 1.82
6162 6672 9.720769 TGGTATTTTCCTCTTGTCTTTTACTAG 57.279 33.333 0.00 0.00 32.84 2.57
6163 6673 9.722184 GGTATTTTCCTCTTGTCTTTTACTAGT 57.278 33.333 0.00 0.00 33.29 2.57
6222 6734 0.755327 AGCTGGTCCTTGCGGTTTTT 60.755 50.000 0.00 0.00 0.00 1.94
6223 6735 0.597377 GCTGGTCCTTGCGGTTTTTG 60.597 55.000 0.00 0.00 0.00 2.44
6224 6736 0.744281 CTGGTCCTTGCGGTTTTTGT 59.256 50.000 0.00 0.00 0.00 2.83
6357 6871 4.151867 CCGTGTTCTTACTACTTTTGCCTC 59.848 45.833 0.00 0.00 0.00 4.70
6412 6934 3.970610 GCTATGTTCATACTGCAAATGCG 59.029 43.478 0.35 0.00 45.83 4.73
6423 6945 0.249031 GCAAATGCGTCAATAGGGCC 60.249 55.000 0.00 0.00 0.00 5.80
6435 6957 0.761802 ATAGGGCCAGCAGCTACTTC 59.238 55.000 6.18 0.00 43.05 3.01
6644 7201 9.007901 GCTTTTGCTATATCATATCCAGTTCTT 57.992 33.333 0.00 0.00 43.35 2.52
6715 7272 3.927142 GCAGTTAGCTTACGTGAAGACAT 59.073 43.478 0.00 0.00 41.15 3.06
6866 7425 5.357032 GGTTTTGACACCCCTCATATGTTAG 59.643 44.000 1.90 0.00 0.00 2.34
6867 7426 5.772393 TTTGACACCCCTCATATGTTAGT 57.228 39.130 1.90 0.00 0.00 2.24
6868 7427 5.772393 TTGACACCCCTCATATGTTAGTT 57.228 39.130 1.90 0.00 0.00 2.24
6910 7469 0.109342 ACTTGTGCCTGAGGAAGTGG 59.891 55.000 0.65 0.00 0.00 4.00
6989 7551 7.827236 CCTGAACTTGAGGGTTACACATTTATA 59.173 37.037 0.00 0.00 0.00 0.98
7039 7602 5.171339 ACTATAAATAGCCAGCCAGGATG 57.829 43.478 0.00 0.00 36.12 3.51
7063 7626 5.298347 CAAATCCTCCTCTATTCGGTAACC 58.702 45.833 0.00 0.00 0.00 2.85
7064 7627 3.967467 TCCTCCTCTATTCGGTAACCT 57.033 47.619 0.00 0.00 0.00 3.50
7086 7651 5.437289 TGTGATGACAGAATTTTCGCTTT 57.563 34.783 0.00 0.00 0.00 3.51
7219 7788 2.805099 CTCTTCTATTGCGCCTCCATTC 59.195 50.000 4.18 0.00 0.00 2.67
7220 7789 2.435805 TCTTCTATTGCGCCTCCATTCT 59.564 45.455 4.18 0.00 0.00 2.40
7222 7791 2.564771 TCTATTGCGCCTCCATTCTTG 58.435 47.619 4.18 0.00 0.00 3.02
7223 7792 1.002033 CTATTGCGCCTCCATTCTTGC 60.002 52.381 4.18 0.00 0.00 4.01
7278 7848 1.236616 TGCGGATTCAAGTGCACTGG 61.237 55.000 22.49 18.95 31.31 4.00
7286 7856 1.273606 TCAAGTGCACTGGACTCTAGC 59.726 52.381 22.49 0.00 0.00 3.42
7291 7861 1.753649 TGCACTGGACTCTAGCATCTC 59.246 52.381 0.00 0.00 0.00 2.75
7320 7890 5.808403 TGTTTTGCACAAATTTGAATCAGC 58.192 33.333 24.64 17.68 29.87 4.26
7323 7893 3.916761 TGCACAAATTTGAATCAGCCTC 58.083 40.909 24.64 3.56 0.00 4.70
7324 7894 3.256558 GCACAAATTTGAATCAGCCTCC 58.743 45.455 24.64 0.00 0.00 4.30
7325 7895 3.853475 CACAAATTTGAATCAGCCTCCC 58.147 45.455 24.64 0.00 0.00 4.30
7326 7896 3.512724 CACAAATTTGAATCAGCCTCCCT 59.487 43.478 24.64 0.00 0.00 4.20
7327 7897 4.706476 CACAAATTTGAATCAGCCTCCCTA 59.294 41.667 24.64 0.00 0.00 3.53
7328 7898 4.706962 ACAAATTTGAATCAGCCTCCCTAC 59.293 41.667 24.64 0.00 0.00 3.18
7329 7899 3.584733 ATTTGAATCAGCCTCCCTACC 57.415 47.619 0.00 0.00 0.00 3.18
7330 7900 1.213296 TTGAATCAGCCTCCCTACCC 58.787 55.000 0.00 0.00 0.00 3.69
7331 7901 0.694444 TGAATCAGCCTCCCTACCCC 60.694 60.000 0.00 0.00 0.00 4.95
7332 7902 1.386057 AATCAGCCTCCCTACCCCC 60.386 63.158 0.00 0.00 0.00 5.40
7333 7903 2.208562 AATCAGCCTCCCTACCCCCA 62.209 60.000 0.00 0.00 0.00 4.96
7335 7905 4.433194 AGCCTCCCTACCCCCACC 62.433 72.222 0.00 0.00 0.00 4.61
7336 7906 4.433194 GCCTCCCTACCCCCACCT 62.433 72.222 0.00 0.00 0.00 4.00
7337 7907 2.040779 CCTCCCTACCCCCACCTC 60.041 72.222 0.00 0.00 0.00 3.85
7338 7908 2.040779 CTCCCTACCCCCACCTCC 60.041 72.222 0.00 0.00 0.00 4.30
7339 7909 3.702623 TCCCTACCCCCACCTCCC 61.703 72.222 0.00 0.00 0.00 4.30
7341 7911 2.376842 CCTACCCCCACCTCCCAT 59.623 66.667 0.00 0.00 0.00 4.00
7343 7913 2.043772 TACCCCCACCTCCCATGG 59.956 66.667 4.14 4.14 36.94 3.66
7366 8134 2.561569 GTCGATGGATTTAGGGTGTGG 58.438 52.381 0.00 0.00 0.00 4.17
7373 8141 2.092323 GATTTAGGGTGTGGCAAGGAC 58.908 52.381 0.00 0.00 0.00 3.85
7379 8147 0.318120 GGTGTGGCAAGGACAAATGG 59.682 55.000 0.00 0.00 0.00 3.16
7401 8169 1.235724 GTAGGCTTGCAACGGTTTCT 58.764 50.000 0.00 0.00 0.00 2.52
7411 8179 2.676176 GCAACGGTTTCTACCTCCCTAC 60.676 54.545 0.00 0.00 42.66 3.18
7445 8213 3.040655 TGGAGGTCGATGGATTTAGGA 57.959 47.619 0.00 0.00 0.00 2.94
7492 8260 4.598852 CCAAGAGGATGATGGTGTGCCA 62.599 54.545 0.00 0.00 43.42 4.92
7500 8268 3.296836 TGGTGTGCCATGCTGTGC 61.297 61.111 0.00 0.00 40.46 4.57
7501 8269 2.987547 GGTGTGCCATGCTGTGCT 60.988 61.111 0.00 0.00 34.09 4.40
7502 8270 1.675310 GGTGTGCCATGCTGTGCTA 60.675 57.895 0.00 0.00 34.09 3.49
7503 8271 1.651240 GGTGTGCCATGCTGTGCTAG 61.651 60.000 0.00 0.00 34.09 3.42
7504 8272 0.674581 GTGTGCCATGCTGTGCTAGA 60.675 55.000 0.00 0.00 0.00 2.43
7505 8273 0.036590 TGTGCCATGCTGTGCTAGAA 59.963 50.000 0.00 0.00 0.00 2.10
7506 8274 1.167851 GTGCCATGCTGTGCTAGAAA 58.832 50.000 0.00 0.00 0.00 2.52
7507 8275 1.747355 GTGCCATGCTGTGCTAGAAAT 59.253 47.619 0.00 0.00 0.00 2.17
7508 8276 2.165030 GTGCCATGCTGTGCTAGAAATT 59.835 45.455 0.00 0.00 0.00 1.82
7509 8277 2.424601 TGCCATGCTGTGCTAGAAATTC 59.575 45.455 0.00 0.00 0.00 2.17
7510 8278 2.424601 GCCATGCTGTGCTAGAAATTCA 59.575 45.455 0.00 0.00 0.00 2.57
7511 8279 3.119388 GCCATGCTGTGCTAGAAATTCAA 60.119 43.478 0.00 0.00 0.00 2.69
7512 8280 4.441079 GCCATGCTGTGCTAGAAATTCAAT 60.441 41.667 0.00 0.00 0.00 2.57
7513 8281 5.041287 CCATGCTGTGCTAGAAATTCAATG 58.959 41.667 0.00 0.00 0.00 2.82
7514 8282 4.707030 TGCTGTGCTAGAAATTCAATGG 57.293 40.909 0.00 0.00 0.00 3.16
7515 8283 3.444742 TGCTGTGCTAGAAATTCAATGGG 59.555 43.478 0.00 0.00 0.00 4.00
7516 8284 3.181483 GCTGTGCTAGAAATTCAATGGGG 60.181 47.826 0.00 0.00 0.00 4.96
7517 8285 2.760092 TGTGCTAGAAATTCAATGGGGC 59.240 45.455 0.00 0.00 0.00 5.80
7518 8286 2.023673 TGCTAGAAATTCAATGGGGCG 58.976 47.619 0.00 0.00 0.00 6.13
7519 8287 2.297701 GCTAGAAATTCAATGGGGCGA 58.702 47.619 0.00 0.00 0.00 5.54
7520 8288 2.033424 GCTAGAAATTCAATGGGGCGAC 59.967 50.000 0.00 0.00 0.00 5.19
7521 8289 2.214376 AGAAATTCAATGGGGCGACA 57.786 45.000 0.00 0.00 0.00 4.35
7522 8290 2.738743 AGAAATTCAATGGGGCGACAT 58.261 42.857 0.00 0.00 0.00 3.06
7523 8291 3.897239 AGAAATTCAATGGGGCGACATA 58.103 40.909 0.00 0.00 0.00 2.29
7524 8292 3.885297 AGAAATTCAATGGGGCGACATAG 59.115 43.478 0.00 0.00 0.00 2.23
7525 8293 2.276732 ATTCAATGGGGCGACATAGG 57.723 50.000 0.00 0.00 0.00 2.57
7526 8294 1.208706 TTCAATGGGGCGACATAGGA 58.791 50.000 0.00 0.00 0.00 2.94
7527 8295 0.758734 TCAATGGGGCGACATAGGAG 59.241 55.000 0.00 0.00 0.00 3.69
7528 8296 0.250467 CAATGGGGCGACATAGGAGG 60.250 60.000 0.00 0.00 0.00 4.30
7529 8297 0.399949 AATGGGGCGACATAGGAGGA 60.400 55.000 0.00 0.00 0.00 3.71
7530 8298 0.399949 ATGGGGCGACATAGGAGGAA 60.400 55.000 0.00 0.00 0.00 3.36
7531 8299 1.335132 TGGGGCGACATAGGAGGAAC 61.335 60.000 0.00 0.00 0.00 3.62
7532 8300 1.067582 GGGCGACATAGGAGGAACG 59.932 63.158 0.00 0.00 0.00 3.95
7533 8301 1.067582 GGCGACATAGGAGGAACGG 59.932 63.158 0.00 0.00 0.00 4.44
7534 8302 1.673808 GGCGACATAGGAGGAACGGT 61.674 60.000 0.00 0.00 0.00 4.83
7535 8303 0.527817 GCGACATAGGAGGAACGGTG 60.528 60.000 0.00 0.00 0.00 4.94
7536 8304 1.100510 CGACATAGGAGGAACGGTGA 58.899 55.000 0.00 0.00 0.00 4.02
7537 8305 1.475280 CGACATAGGAGGAACGGTGAA 59.525 52.381 0.00 0.00 0.00 3.18
7538 8306 2.100916 CGACATAGGAGGAACGGTGAAT 59.899 50.000 0.00 0.00 0.00 2.57
7539 8307 3.718815 GACATAGGAGGAACGGTGAATC 58.281 50.000 0.00 0.00 0.00 2.52
7540 8308 3.104512 ACATAGGAGGAACGGTGAATCA 58.895 45.455 0.00 0.00 0.00 2.57
7541 8309 3.118738 ACATAGGAGGAACGGTGAATCAC 60.119 47.826 4.51 4.51 0.00 3.06
7558 8326 8.316640 GTGAATCACCATCATCTTTATACTCC 57.683 38.462 1.10 0.00 0.00 3.85
7559 8327 8.153550 GTGAATCACCATCATCTTTATACTCCT 58.846 37.037 1.10 0.00 0.00 3.69
7560 8328 9.379770 TGAATCACCATCATCTTTATACTCCTA 57.620 33.333 0.00 0.00 0.00 2.94
7584 8352 3.641437 AAAACACGGTTGATGGTGATG 57.359 42.857 0.00 0.00 37.58 3.07
7585 8353 1.533625 AACACGGTTGATGGTGATGG 58.466 50.000 0.00 0.00 37.58 3.51
7586 8354 0.400213 ACACGGTTGATGGTGATGGT 59.600 50.000 0.00 0.00 37.58 3.55
7587 8355 0.804364 CACGGTTGATGGTGATGGTG 59.196 55.000 0.00 0.00 36.25 4.17
7588 8356 0.400213 ACGGTTGATGGTGATGGTGT 59.600 50.000 0.00 0.00 0.00 4.16
7589 8357 0.804364 CGGTTGATGGTGATGGTGTG 59.196 55.000 0.00 0.00 0.00 3.82
7590 8358 0.527565 GGTTGATGGTGATGGTGTGC 59.472 55.000 0.00 0.00 0.00 4.57
7591 8359 0.527565 GTTGATGGTGATGGTGTGCC 59.472 55.000 0.00 0.00 0.00 5.01
7592 8360 0.405198 TTGATGGTGATGGTGTGCCT 59.595 50.000 0.00 0.00 35.27 4.75
7593 8361 0.322726 TGATGGTGATGGTGTGCCTG 60.323 55.000 0.00 0.00 35.27 4.85
7594 8362 1.660560 GATGGTGATGGTGTGCCTGC 61.661 60.000 0.00 0.00 35.27 4.85
7595 8363 3.064324 GGTGATGGTGTGCCTGCC 61.064 66.667 0.00 0.00 35.27 4.85
7596 8364 2.034687 GTGATGGTGTGCCTGCCT 59.965 61.111 0.00 0.00 35.27 4.75
7597 8365 1.604593 GTGATGGTGTGCCTGCCTT 60.605 57.895 0.00 0.00 35.27 4.35
7598 8366 1.303561 TGATGGTGTGCCTGCCTTC 60.304 57.895 0.00 0.00 35.27 3.46
7599 8367 1.001641 GATGGTGTGCCTGCCTTCT 60.002 57.895 0.00 0.00 35.27 2.85
7600 8368 1.303888 ATGGTGTGCCTGCCTTCTG 60.304 57.895 0.00 0.00 35.27 3.02
7601 8369 1.782201 ATGGTGTGCCTGCCTTCTGA 61.782 55.000 0.00 0.00 35.27 3.27
7602 8370 1.968540 GGTGTGCCTGCCTTCTGAC 60.969 63.158 0.00 0.00 0.00 3.51
7603 8371 1.968540 GTGTGCCTGCCTTCTGACC 60.969 63.158 0.00 0.00 0.00 4.02
7604 8372 2.431683 GTGCCTGCCTTCTGACCA 59.568 61.111 0.00 0.00 0.00 4.02
7605 8373 1.001641 GTGCCTGCCTTCTGACCAT 60.002 57.895 0.00 0.00 0.00 3.55
7606 8374 1.028868 GTGCCTGCCTTCTGACCATC 61.029 60.000 0.00 0.00 0.00 3.51
7607 8375 1.203441 TGCCTGCCTTCTGACCATCT 61.203 55.000 0.00 0.00 0.00 2.90
7608 8376 0.463474 GCCTGCCTTCTGACCATCTC 60.463 60.000 0.00 0.00 0.00 2.75
7609 8377 0.907486 CCTGCCTTCTGACCATCTCA 59.093 55.000 0.00 0.00 0.00 3.27
7611 8379 0.251354 TGCCTTCTGACCATCTCAGC 59.749 55.000 0.00 0.00 45.64 4.26
7612 8380 0.463474 GCCTTCTGACCATCTCAGCC 60.463 60.000 0.00 0.00 45.64 4.85
7613 8381 0.179089 CCTTCTGACCATCTCAGCCG 60.179 60.000 0.00 0.00 45.64 5.52
7614 8382 0.534412 CTTCTGACCATCTCAGCCGT 59.466 55.000 0.00 0.00 45.64 5.68
7615 8383 0.532573 TTCTGACCATCTCAGCCGTC 59.467 55.000 0.00 0.00 45.64 4.79
7616 8384 0.611896 TCTGACCATCTCAGCCGTCA 60.612 55.000 0.00 0.00 45.64 4.35
7617 8385 0.247460 CTGACCATCTCAGCCGTCAA 59.753 55.000 0.00 0.00 40.23 3.18
7618 8386 0.684535 TGACCATCTCAGCCGTCAAA 59.315 50.000 0.00 0.00 32.51 2.69
7619 8387 1.278985 TGACCATCTCAGCCGTCAAAT 59.721 47.619 0.00 0.00 32.51 2.32
7620 8388 1.936547 GACCATCTCAGCCGTCAAATC 59.063 52.381 0.00 0.00 0.00 2.17
7621 8389 1.556911 ACCATCTCAGCCGTCAAATCT 59.443 47.619 0.00 0.00 0.00 2.40
7622 8390 1.938577 CCATCTCAGCCGTCAAATCTG 59.061 52.381 0.00 0.00 0.00 2.90
7623 8391 2.419159 CCATCTCAGCCGTCAAATCTGA 60.419 50.000 0.00 0.00 35.74 3.27
7624 8392 3.264947 CATCTCAGCCGTCAAATCTGAA 58.735 45.455 0.00 0.00 36.54 3.02
7625 8393 3.401033 TCTCAGCCGTCAAATCTGAAA 57.599 42.857 0.00 0.00 36.54 2.69
7626 8394 3.067106 TCTCAGCCGTCAAATCTGAAAC 58.933 45.455 0.00 0.00 36.54 2.78
7627 8395 2.807967 CTCAGCCGTCAAATCTGAAACA 59.192 45.455 0.00 0.00 36.54 2.83
7628 8396 3.210227 TCAGCCGTCAAATCTGAAACAA 58.790 40.909 0.00 0.00 34.30 2.83
7629 8397 3.629855 TCAGCCGTCAAATCTGAAACAAA 59.370 39.130 0.00 0.00 34.30 2.83
7630 8398 3.730715 CAGCCGTCAAATCTGAAACAAAC 59.269 43.478 0.00 0.00 31.88 2.93
7631 8399 2.719046 GCCGTCAAATCTGAAACAAACG 59.281 45.455 0.00 0.00 31.88 3.60
7632 8400 3.296628 CCGTCAAATCTGAAACAAACGG 58.703 45.455 0.00 0.00 31.88 4.44
7633 8401 3.242936 CCGTCAAATCTGAAACAAACGGT 60.243 43.478 11.43 0.00 32.11 4.83
7634 8402 4.347813 CGTCAAATCTGAAACAAACGGTT 58.652 39.130 0.00 0.00 42.98 4.44
7654 8422 9.638239 AACGGTTTAGATGACGTTAAGTATAAA 57.362 29.630 0.00 0.00 46.25 1.40
7655 8423 9.638239 ACGGTTTAGATGACGTTAAGTATAAAA 57.362 29.630 0.00 0.00 35.90 1.52
7658 8426 9.911980 GTTTAGATGACGTTAAGTATAAAAGGC 57.088 33.333 0.00 0.00 0.00 4.35
7659 8427 9.656040 TTTAGATGACGTTAAGTATAAAAGGCA 57.344 29.630 0.00 0.00 0.00 4.75
7660 8428 9.826574 TTAGATGACGTTAAGTATAAAAGGCAT 57.173 29.630 0.00 0.00 34.34 4.40
7661 8429 8.366671 AGATGACGTTAAGTATAAAAGGCATC 57.633 34.615 8.85 8.85 41.74 3.91
7662 8430 6.913873 TGACGTTAAGTATAAAAGGCATCC 57.086 37.500 0.00 0.00 0.00 3.51
7663 8431 5.818857 TGACGTTAAGTATAAAAGGCATCCC 59.181 40.000 0.00 0.00 0.00 3.85
7664 8432 5.997843 ACGTTAAGTATAAAAGGCATCCCT 58.002 37.500 0.00 0.00 45.77 4.20
7673 8441 3.987594 AGGCATCCCTTCTTCCAAC 57.012 52.632 0.00 0.00 38.74 3.77
7674 8442 1.376649 AGGCATCCCTTCTTCCAACT 58.623 50.000 0.00 0.00 38.74 3.16
7675 8443 1.283321 AGGCATCCCTTCTTCCAACTC 59.717 52.381 0.00 0.00 38.74 3.01
7676 8444 1.004745 GGCATCCCTTCTTCCAACTCA 59.995 52.381 0.00 0.00 0.00 3.41
7677 8445 2.357569 GGCATCCCTTCTTCCAACTCAT 60.358 50.000 0.00 0.00 0.00 2.90
7678 8446 2.686915 GCATCCCTTCTTCCAACTCATG 59.313 50.000 0.00 0.00 0.00 3.07
7686 8454 3.831883 CCAACTCATGGCCCGATG 58.168 61.111 0.00 0.00 43.80 3.84
7687 8455 1.224315 CCAACTCATGGCCCGATGA 59.776 57.895 0.00 2.40 43.80 2.92
7706 8474 3.073101 GGTACCCTCGACCGCCTT 61.073 66.667 0.00 0.00 0.00 4.35
7707 8475 2.493501 GTACCCTCGACCGCCTTC 59.506 66.667 0.00 0.00 0.00 3.46
7708 8476 2.050934 GTACCCTCGACCGCCTTCT 61.051 63.158 0.00 0.00 0.00 2.85
7709 8477 2.050350 TACCCTCGACCGCCTTCTG 61.050 63.158 0.00 0.00 0.00 3.02
7710 8478 4.148825 CCCTCGACCGCCTTCTGG 62.149 72.222 0.00 0.00 0.00 3.86
7711 8479 3.068691 CCTCGACCGCCTTCTGGA 61.069 66.667 0.00 0.00 34.57 3.86
7712 8480 2.427245 CCTCGACCGCCTTCTGGAT 61.427 63.158 0.00 0.00 34.57 3.41
7713 8481 1.517832 CTCGACCGCCTTCTGGATT 59.482 57.895 0.00 0.00 34.57 3.01
7714 8482 0.744874 CTCGACCGCCTTCTGGATTA 59.255 55.000 0.00 0.00 34.57 1.75
7715 8483 0.744874 TCGACCGCCTTCTGGATTAG 59.255 55.000 0.00 0.00 34.57 1.73
7716 8484 0.876342 CGACCGCCTTCTGGATTAGC 60.876 60.000 0.00 0.00 34.57 3.09
7717 8485 0.533085 GACCGCCTTCTGGATTAGCC 60.533 60.000 0.00 0.00 34.57 3.93
7718 8486 1.595382 CCGCCTTCTGGATTAGCCG 60.595 63.158 0.00 0.00 40.66 5.52
7719 8487 1.441729 CGCCTTCTGGATTAGCCGA 59.558 57.895 0.00 0.00 40.66 5.54
7720 8488 0.034059 CGCCTTCTGGATTAGCCGAT 59.966 55.000 0.00 0.00 40.66 4.18
7721 8489 1.517242 GCCTTCTGGATTAGCCGATG 58.483 55.000 0.00 0.00 40.66 3.84
7722 8490 1.517242 CCTTCTGGATTAGCCGATGC 58.483 55.000 0.00 0.00 40.66 3.91
7723 8491 1.143305 CTTCTGGATTAGCCGATGCG 58.857 55.000 0.00 0.00 44.33 4.73
7724 8492 0.880278 TTCTGGATTAGCCGATGCGC 60.880 55.000 0.00 0.00 44.33 6.09
7725 8493 2.661537 TGGATTAGCCGATGCGCG 60.662 61.111 0.00 0.00 44.33 6.86
7734 8502 4.799473 CGATGCGCGGCACAACAG 62.799 66.667 8.83 0.00 43.04 3.16
7743 8511 2.360475 GCACAACAGCCCCTCTCC 60.360 66.667 0.00 0.00 0.00 3.71
7744 8512 2.900106 GCACAACAGCCCCTCTCCT 61.900 63.158 0.00 0.00 0.00 3.69
7745 8513 1.298014 CACAACAGCCCCTCTCCTC 59.702 63.158 0.00 0.00 0.00 3.71
7746 8514 1.920835 ACAACAGCCCCTCTCCTCC 60.921 63.158 0.00 0.00 0.00 4.30
7747 8515 1.920325 CAACAGCCCCTCTCCTCCA 60.920 63.158 0.00 0.00 0.00 3.86
7748 8516 1.614824 AACAGCCCCTCTCCTCCAG 60.615 63.158 0.00 0.00 0.00 3.86
7749 8517 2.112072 AACAGCCCCTCTCCTCCAGA 62.112 60.000 0.00 0.00 0.00 3.86
7750 8518 1.074623 CAGCCCCTCTCCTCCAGAT 60.075 63.158 0.00 0.00 0.00 2.90
7751 8519 1.074623 AGCCCCTCTCCTCCAGATG 60.075 63.158 0.00 0.00 0.00 2.90
7752 8520 2.146061 GCCCCTCTCCTCCAGATGG 61.146 68.421 0.00 0.00 36.81 3.51
7753 8521 1.628727 CCCCTCTCCTCCAGATGGA 59.371 63.158 0.79 0.79 38.87 3.41
7762 8530 3.103236 TCCAGATGGAGCCCTTTGA 57.897 52.632 0.00 0.00 39.78 2.69
7763 8531 1.371467 TCCAGATGGAGCCCTTTGAA 58.629 50.000 0.00 0.00 39.78 2.69
7764 8532 1.925255 TCCAGATGGAGCCCTTTGAAT 59.075 47.619 0.00 0.00 39.78 2.57
7765 8533 2.092212 TCCAGATGGAGCCCTTTGAATC 60.092 50.000 0.00 0.00 39.78 2.52
7766 8534 2.305009 CAGATGGAGCCCTTTGAATCC 58.695 52.381 0.00 0.00 0.00 3.01
7767 8535 1.216427 AGATGGAGCCCTTTGAATCCC 59.784 52.381 0.00 0.00 0.00 3.85
7768 8536 1.216427 GATGGAGCCCTTTGAATCCCT 59.784 52.381 0.00 0.00 0.00 4.20
7769 8537 1.979809 TGGAGCCCTTTGAATCCCTA 58.020 50.000 0.00 0.00 0.00 3.53
7770 8538 2.502745 TGGAGCCCTTTGAATCCCTAT 58.497 47.619 0.00 0.00 0.00 2.57
7771 8539 3.675613 TGGAGCCCTTTGAATCCCTATA 58.324 45.455 0.00 0.00 0.00 1.31
7772 8540 3.652869 TGGAGCCCTTTGAATCCCTATAG 59.347 47.826 0.00 0.00 0.00 1.31
7773 8541 3.560239 GGAGCCCTTTGAATCCCTATAGC 60.560 52.174 0.00 0.00 0.00 2.97
7774 8542 3.056080 AGCCCTTTGAATCCCTATAGCA 58.944 45.455 0.00 0.00 0.00 3.49
7775 8543 3.073650 AGCCCTTTGAATCCCTATAGCAG 59.926 47.826 0.00 0.00 0.00 4.24
7776 8544 3.073062 GCCCTTTGAATCCCTATAGCAGA 59.927 47.826 0.00 0.00 0.00 4.26
7777 8545 4.646572 CCCTTTGAATCCCTATAGCAGAC 58.353 47.826 0.00 0.00 0.00 3.51
7778 8546 4.349342 CCCTTTGAATCCCTATAGCAGACT 59.651 45.833 0.00 0.00 0.00 3.24
7779 8547 5.544176 CCCTTTGAATCCCTATAGCAGACTA 59.456 44.000 0.00 0.00 0.00 2.59
7780 8548 6.295575 CCCTTTGAATCCCTATAGCAGACTAG 60.296 46.154 0.00 0.00 0.00 2.57
7781 8549 5.730296 TTGAATCCCTATAGCAGACTAGC 57.270 43.478 0.00 0.00 0.00 3.42
7782 8550 4.740902 TGAATCCCTATAGCAGACTAGCA 58.259 43.478 0.00 0.00 36.85 3.49
7783 8551 4.769488 TGAATCCCTATAGCAGACTAGCAG 59.231 45.833 0.00 0.00 36.85 4.24
7784 8552 2.520069 TCCCTATAGCAGACTAGCAGC 58.480 52.381 0.00 0.00 36.85 5.25
7785 8553 1.201181 CCCTATAGCAGACTAGCAGCG 59.799 57.143 0.00 0.00 36.85 5.18
7786 8554 1.201181 CCTATAGCAGACTAGCAGCGG 59.799 57.143 0.00 0.00 36.85 5.52
7787 8555 0.598562 TATAGCAGACTAGCAGCGGC 59.401 55.000 0.00 0.00 41.61 6.53
7800 8568 2.202946 GCGGCTGCTTCTCCTACC 60.203 66.667 11.21 0.00 38.39 3.18
7801 8569 2.105128 CGGCTGCTTCTCCTACCG 59.895 66.667 0.00 0.00 0.00 4.02
7802 8570 2.501610 GGCTGCTTCTCCTACCGG 59.498 66.667 0.00 0.00 0.00 5.28
7803 8571 2.058595 GGCTGCTTCTCCTACCGGA 61.059 63.158 9.46 0.00 37.82 5.14
7804 8572 1.614241 GGCTGCTTCTCCTACCGGAA 61.614 60.000 9.46 0.00 39.29 4.30
7805 8573 0.179097 GCTGCTTCTCCTACCGGAAG 60.179 60.000 9.46 0.09 39.29 3.46
7806 8574 1.475403 CTGCTTCTCCTACCGGAAGA 58.525 55.000 9.46 2.09 40.74 2.87
7807 8575 1.825474 CTGCTTCTCCTACCGGAAGAA 59.175 52.381 9.46 10.56 40.74 2.52
7808 8576 2.432510 CTGCTTCTCCTACCGGAAGAAT 59.567 50.000 9.46 0.00 40.74 2.40
7809 8577 2.168521 TGCTTCTCCTACCGGAAGAATG 59.831 50.000 9.46 7.00 40.74 2.67
7810 8578 2.431057 GCTTCTCCTACCGGAAGAATGA 59.569 50.000 9.46 0.00 40.74 2.57
7811 8579 3.738590 GCTTCTCCTACCGGAAGAATGAC 60.739 52.174 9.46 1.40 40.74 3.06
7812 8580 2.385803 TCTCCTACCGGAAGAATGACC 58.614 52.381 9.46 0.00 39.29 4.02
7822 8590 3.676093 GGAAGAATGACCGAAGAAGGTT 58.324 45.455 0.00 0.00 46.09 3.50
7823 8591 4.072839 GGAAGAATGACCGAAGAAGGTTT 58.927 43.478 0.00 0.00 46.09 3.27
7824 8592 4.083271 GGAAGAATGACCGAAGAAGGTTTG 60.083 45.833 0.00 0.00 46.09 2.93
7825 8593 3.412386 AGAATGACCGAAGAAGGTTTGG 58.588 45.455 0.00 0.00 46.09 3.28
7826 8594 2.951229 ATGACCGAAGAAGGTTTGGT 57.049 45.000 0.00 0.00 46.09 3.67
7827 8595 1.961793 TGACCGAAGAAGGTTTGGTG 58.038 50.000 1.20 0.00 46.09 4.17
7828 8596 1.235724 GACCGAAGAAGGTTTGGTGG 58.764 55.000 1.20 0.00 46.09 4.61
7829 8597 0.549469 ACCGAAGAAGGTTTGGTGGT 59.451 50.000 0.00 0.00 43.00 4.16
7830 8598 0.951558 CCGAAGAAGGTTTGGTGGTG 59.048 55.000 0.00 0.00 0.00 4.17
7831 8599 0.951558 CGAAGAAGGTTTGGTGGTGG 59.048 55.000 0.00 0.00 0.00 4.61
7832 8600 1.749286 CGAAGAAGGTTTGGTGGTGGT 60.749 52.381 0.00 0.00 0.00 4.16
7833 8601 1.681264 GAAGAAGGTTTGGTGGTGGTG 59.319 52.381 0.00 0.00 0.00 4.17
7834 8602 0.755327 AGAAGGTTTGGTGGTGGTGC 60.755 55.000 0.00 0.00 0.00 5.01
7835 8603 2.070654 GAAGGTTTGGTGGTGGTGCG 62.071 60.000 0.00 0.00 0.00 5.34
7836 8604 2.517402 GGTTTGGTGGTGGTGCGA 60.517 61.111 0.00 0.00 0.00 5.10
7837 8605 1.901464 GGTTTGGTGGTGGTGCGAT 60.901 57.895 0.00 0.00 0.00 4.58
7838 8606 1.460273 GGTTTGGTGGTGGTGCGATT 61.460 55.000 0.00 0.00 0.00 3.34
7839 8607 0.387565 GTTTGGTGGTGGTGCGATTT 59.612 50.000 0.00 0.00 0.00 2.17
7840 8608 1.609555 GTTTGGTGGTGGTGCGATTTA 59.390 47.619 0.00 0.00 0.00 1.40
7841 8609 1.240256 TTGGTGGTGGTGCGATTTAC 58.760 50.000 0.00 0.00 0.00 2.01
7842 8610 0.398696 TGGTGGTGGTGCGATTTACT 59.601 50.000 0.00 0.00 0.00 2.24
7843 8611 1.202830 TGGTGGTGGTGCGATTTACTT 60.203 47.619 0.00 0.00 0.00 2.24
7844 8612 1.467342 GGTGGTGGTGCGATTTACTTC 59.533 52.381 0.00 0.00 0.00 3.01
7845 8613 2.423577 GTGGTGGTGCGATTTACTTCT 58.576 47.619 0.00 0.00 0.00 2.85
7846 8614 2.415512 GTGGTGGTGCGATTTACTTCTC 59.584 50.000 0.00 0.00 0.00 2.87
7847 8615 2.007608 GGTGGTGCGATTTACTTCTCC 58.992 52.381 0.00 0.00 0.00 3.71
7848 8616 2.614481 GGTGGTGCGATTTACTTCTCCA 60.614 50.000 0.00 0.00 0.00 3.86
7849 8617 3.071479 GTGGTGCGATTTACTTCTCCAA 58.929 45.455 0.00 0.00 0.00 3.53
7850 8618 3.689649 GTGGTGCGATTTACTTCTCCAAT 59.310 43.478 0.00 0.00 0.00 3.16
7851 8619 3.938963 TGGTGCGATTTACTTCTCCAATC 59.061 43.478 0.00 0.00 0.00 2.67
7852 8620 4.192317 GGTGCGATTTACTTCTCCAATCT 58.808 43.478 0.00 0.00 0.00 2.40
7853 8621 4.271291 GGTGCGATTTACTTCTCCAATCTC 59.729 45.833 0.00 0.00 0.00 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 1.506025 ACTGTGTTGCCCCCAATTTT 58.494 45.000 0.00 0.00 32.75 1.82
45 46 6.593382 TGGAAACAACAAGAAATTCCAAACTG 59.407 34.615 3.21 0.00 44.75 3.16
47 48 6.976636 TGGAAACAACAAGAAATTCCAAAC 57.023 33.333 3.21 0.00 44.75 2.93
101 102 9.277783 AGATCAAATGAATAGGCATACTACAAC 57.722 33.333 0.00 0.00 33.70 3.32
134 135 8.251026 GGATCGTATGACAAGAATATATGGTCA 58.749 37.037 10.38 10.38 42.07 4.02
214 247 3.634504 TGGTACGGTATCTTGAAGCCTA 58.365 45.455 0.00 0.00 0.00 3.93
262 297 4.279671 GGTACAATCATTTGGTGGTCAACA 59.720 41.667 0.00 0.00 37.15 3.33
319 354 5.843969 TGCTAGGGTGGATTATCATTCTGTA 59.156 40.000 0.00 0.00 0.00 2.74
494 532 1.069432 GCGAAGGAAAAGGGAAACGAC 60.069 52.381 0.00 0.00 0.00 4.34
562 600 2.441750 AGGCTAGAAGGTCAAACCAACA 59.558 45.455 0.00 0.00 41.95 3.33
570 608 2.376109 CCGAGTAAGGCTAGAAGGTCA 58.624 52.381 0.00 0.00 0.00 4.02
620 658 4.201980 GGGTGAAAACAAGTCTTGTGTACC 60.202 45.833 18.84 20.35 44.59 3.34
676 714 0.378962 CGAGGAGAAGAGTACGCAGG 59.621 60.000 0.00 0.00 0.00 4.85
678 716 1.085091 GACGAGGAGAAGAGTACGCA 58.915 55.000 0.00 0.00 0.00 5.24
679 717 0.377905 GGACGAGGAGAAGAGTACGC 59.622 60.000 0.00 0.00 0.00 4.42
680 718 0.651551 CGGACGAGGAGAAGAGTACG 59.348 60.000 0.00 0.00 34.50 3.67
681 719 0.377905 GCGGACGAGGAGAAGAGTAC 59.622 60.000 0.00 0.00 0.00 2.73
745 815 9.494271 TTCATAGCATGAGAGGATAAATTGTAC 57.506 33.333 0.00 0.00 40.94 2.90
747 817 8.985315 TTTCATAGCATGAGAGGATAAATTGT 57.015 30.769 0.00 0.00 40.94 2.71
885 987 3.857309 AACAGTGCCCTGCAGCCTC 62.857 63.158 8.66 2.41 42.81 4.70
951 1054 1.002624 CTGCCCAAGTAAGCCCGAA 60.003 57.895 0.00 0.00 0.00 4.30
1019 1124 0.105778 GAGGAATGGAGGAGGAAGCG 59.894 60.000 0.00 0.00 0.00 4.68
1020 1125 0.472044 GGAGGAATGGAGGAGGAAGC 59.528 60.000 0.00 0.00 0.00 3.86
1023 1128 0.266152 GAGGGAGGAATGGAGGAGGA 59.734 60.000 0.00 0.00 0.00 3.71
1510 1619 7.615582 TCACTGATACTTCTGCCTAAAAATG 57.384 36.000 0.00 0.00 0.00 2.32
1637 1747 2.386661 ACCAGAATCTTACACTGCCG 57.613 50.000 0.00 0.00 0.00 5.69
1661 1771 4.406972 TCTGATACCTCTTGTTCCTCCATG 59.593 45.833 0.00 0.00 0.00 3.66
1691 1801 0.034059 CAGTGTTCTCTGCGGGAAGT 59.966 55.000 0.00 0.00 0.00 3.01
1717 1827 1.523758 CTGCTAACTTCCCACCACAC 58.476 55.000 0.00 0.00 0.00 3.82
1727 1837 2.489938 TTTCCCATCGCTGCTAACTT 57.510 45.000 0.00 0.00 0.00 2.66
1787 1897 1.207811 AGCATACCAATTTGCAAGGGC 59.792 47.619 12.26 4.80 41.35 5.19
1816 1926 6.625740 CGCAATTGATACCTCTTGTTCCAATT 60.626 38.462 10.34 0.00 37.81 2.32
1837 1947 1.024271 GCTTGGAAGCCATATCGCAA 58.976 50.000 0.00 0.00 46.20 4.85
1859 1969 4.348863 AGAGTTTCAGTGTTCTCTGCAT 57.651 40.909 11.42 0.00 36.17 3.96
1877 1987 5.499139 TTGCTAACTCCAAAACACAAGAG 57.501 39.130 0.00 0.00 0.00 2.85
1887 1997 4.287067 ACTTCCTCTCATTGCTAACTCCAA 59.713 41.667 0.00 0.00 0.00 3.53
1997 2111 2.565834 GTTCCCTCAGCCACTACAAGTA 59.434 50.000 0.00 0.00 0.00 2.24
1998 2112 1.348036 GTTCCCTCAGCCACTACAAGT 59.652 52.381 0.00 0.00 0.00 3.16
2004 2118 1.835927 GCAGAGTTCCCTCAGCCACT 61.836 60.000 0.00 0.00 42.61 4.00
2103 2217 6.169094 CACAACTGGTAGTTCAATCTCTGAT 58.831 40.000 0.00 0.00 36.03 2.90
2331 2445 9.520515 AAATATATGTTCACTGACTGAAAAGGT 57.479 29.630 0.00 0.00 40.73 3.50
2398 2512 2.981859 ACCACGTGATATCCCTGAAC 57.018 50.000 19.30 0.00 0.00 3.18
2852 2967 8.874744 AGCCATATGATTAGTCATTTAGCAAT 57.125 30.769 6.00 0.00 42.37 3.56
2853 2968 7.938490 TGAGCCATATGATTAGTCATTTAGCAA 59.062 33.333 6.00 0.00 42.37 3.91
2905 3020 7.796054 AGTTATATAGAGACAAGGCAACACAT 58.204 34.615 0.00 0.00 41.41 3.21
2935 3050 5.938125 AGAAACTACACCACTGCGAAAATAT 59.062 36.000 0.00 0.00 0.00 1.28
2937 3052 4.134563 AGAAACTACACCACTGCGAAAAT 58.865 39.130 0.00 0.00 0.00 1.82
3163 3281 2.841044 GAATACCTCCGCCGGGGA 60.841 66.667 21.95 15.56 44.68 4.81
3244 3362 6.096036 CACACACACGAAAGAGAGATTATCT 58.904 40.000 0.00 0.00 42.61 1.98
3272 3392 3.043713 CATGTGACACGTGCGCCT 61.044 61.111 17.22 5.53 0.00 5.52
3346 3468 9.471084 AAATAGAAACAAAATTAGACGTTTGGG 57.529 29.630 0.00 0.00 38.73 4.12
3499 3633 0.810648 TTGGAAAGGTCGATGCATGC 59.189 50.000 11.82 11.82 0.00 4.06
3572 3706 8.567948 TGAAACTTCCTGATGAATCACTTTTAC 58.432 33.333 0.00 0.00 32.50 2.01
3835 3978 8.194769 TCGTCTATAACATGCTTATTGAGACAA 58.805 33.333 18.54 0.00 32.22 3.18
3940 4083 6.670695 ATTAAGGCAGAAAATGTTGGAACT 57.329 33.333 0.00 0.00 0.00 3.01
3963 4107 6.964807 AATTGGCATGCATCAACTATCTAA 57.035 33.333 21.36 0.00 0.00 2.10
4142 4395 2.306805 TGTTCAATCAGAGCATGGTCCT 59.693 45.455 20.92 6.19 32.06 3.85
4146 4399 2.819422 CGTGTTCAATCAGAGCATGG 57.181 50.000 0.00 0.00 39.74 3.66
4180 4433 4.746535 TTTATCAGGCACTTATGACGGA 57.253 40.909 0.00 0.00 42.74 4.69
4198 4452 7.255590 CCCAGAGAAGTTCAAGAAAGCATTTTA 60.256 37.037 5.50 0.00 39.27 1.52
4332 4593 2.223900 GCCAGAAATTATGCCTGCTTCC 60.224 50.000 0.00 0.00 0.00 3.46
4345 4606 6.099413 TCAAGATCATCTACTCTGCCAGAAAT 59.901 38.462 0.00 0.00 0.00 2.17
4621 4899 5.105797 GCAATTATGTGGTGATCCAAACAGA 60.106 40.000 0.00 0.00 46.15 3.41
4622 4900 5.104374 GCAATTATGTGGTGATCCAAACAG 58.896 41.667 0.00 0.00 46.15 3.16
4804 5084 8.267620 TCATTTCATAAGCATTATATGGGTCG 57.732 34.615 0.00 0.00 39.78 4.79
4849 5129 4.292186 TCTAGCTGCTGAACCATTCTTT 57.708 40.909 13.43 0.00 0.00 2.52
4938 5218 9.106070 CTGGTGTACCAAAATAAAGTAGTATCC 57.894 37.037 5.12 0.00 46.97 2.59
4985 5265 2.494059 GAGTTTAACAGGCTGACAGCA 58.506 47.619 27.87 4.99 44.75 4.41
4988 5268 2.902705 ACGAGTTTAACAGGCTGACA 57.097 45.000 23.66 4.99 0.00 3.58
5022 5302 8.127327 GTCAGTACAAACTAGTAAGATGCGATA 58.873 37.037 0.00 0.00 33.48 2.92
5041 5426 9.453325 GACTGTTAGCTTCTATAATGTCAGTAC 57.547 37.037 0.00 0.00 33.55 2.73
5090 5475 9.474313 AAAAGTCTAACTGGATGCCATTTAATA 57.526 29.630 0.00 0.00 30.29 0.98
5091 5476 7.961326 AAAGTCTAACTGGATGCCATTTAAT 57.039 32.000 0.00 0.00 30.29 1.40
5100 5485 9.219603 TCAACATCTAAAAAGTCTAACTGGATG 57.780 33.333 0.00 0.00 35.57 3.51
5102 5487 9.052759 GTTCAACATCTAAAAAGTCTAACTGGA 57.947 33.333 0.00 0.00 0.00 3.86
5112 5498 9.586435 GGATAAATGGGTTCAACATCTAAAAAG 57.414 33.333 0.00 0.00 0.00 2.27
5173 5560 5.999205 AATATTCAAGACAACAATGGCCA 57.001 34.783 8.56 8.56 33.81 5.36
5196 5583 1.360852 TGCCCCAGGGAATGTACAAAT 59.639 47.619 7.25 0.00 37.50 2.32
5197 5584 0.780637 TGCCCCAGGGAATGTACAAA 59.219 50.000 7.25 0.00 37.50 2.83
5199 5586 0.780637 TTTGCCCCAGGGAATGTACA 59.219 50.000 7.25 0.00 32.01 2.90
5200 5587 1.756538 CATTTGCCCCAGGGAATGTAC 59.243 52.381 7.25 0.00 32.01 2.90
5201 5588 1.360852 ACATTTGCCCCAGGGAATGTA 59.639 47.619 18.55 0.00 39.43 2.29
5202 5589 0.116940 ACATTTGCCCCAGGGAATGT 59.883 50.000 15.51 15.51 37.67 2.71
5224 5611 8.897872 AAAGACATAGTTTCTTTCCTTCGTTA 57.102 30.769 0.00 0.00 38.67 3.18
5261 5649 8.455598 TTTTCTTTCCTGAAAAAGTAACAACG 57.544 30.769 0.00 0.00 41.26 4.10
5310 5699 6.174720 TCTATATTTCCCTGACATGTGGAC 57.825 41.667 1.15 0.00 0.00 4.02
5316 5705 8.733092 TCTTCTGATCTATATTTCCCTGACAT 57.267 34.615 0.00 0.00 0.00 3.06
5399 5788 8.632679 ACATTTATTTCGTCATTATTGCCATCT 58.367 29.630 0.00 0.00 0.00 2.90
5499 5894 5.106869 TGCCTAACAACGTTCATGTATGTTC 60.107 40.000 6.93 0.00 35.89 3.18
5574 5969 7.707624 ATTGCAGTGAATGAGAAATAAAGGA 57.292 32.000 0.00 0.00 0.00 3.36
5676 6071 5.186198 ACCAAATGAACTACACCTAGATGC 58.814 41.667 0.00 0.00 0.00 3.91
5740 6135 7.394816 ACCTGTAAGTAGCAATGTATCAGTTT 58.605 34.615 0.00 0.00 0.00 2.66
5741 6136 6.947464 ACCTGTAAGTAGCAATGTATCAGTT 58.053 36.000 0.00 0.00 0.00 3.16
5742 6137 6.546428 ACCTGTAAGTAGCAATGTATCAGT 57.454 37.500 0.00 0.00 0.00 3.41
5743 6138 7.941919 TCTACCTGTAAGTAGCAATGTATCAG 58.058 38.462 0.00 0.00 39.71 2.90
5744 6139 7.891498 TCTACCTGTAAGTAGCAATGTATCA 57.109 36.000 0.00 0.00 39.71 2.15
5745 6140 9.197694 CATTCTACCTGTAAGTAGCAATGTATC 57.802 37.037 0.00 0.00 39.71 2.24
5746 6141 8.705594 ACATTCTACCTGTAAGTAGCAATGTAT 58.294 33.333 17.82 5.41 42.02 2.29
5747 6142 8.074613 ACATTCTACCTGTAAGTAGCAATGTA 57.925 34.615 17.82 0.00 42.02 2.29
5748 6143 6.947464 ACATTCTACCTGTAAGTAGCAATGT 58.053 36.000 15.71 15.71 40.85 2.71
5749 6144 7.766278 AGAACATTCTACCTGTAAGTAGCAATG 59.234 37.037 14.95 14.95 39.71 2.82
5814 6219 6.767524 ATTTCAACAGAACCAACTACAACA 57.232 33.333 0.00 0.00 0.00 3.33
5893 6328 7.360113 ACAAACAAAAAGTCATAGAACCCAT 57.640 32.000 0.00 0.00 0.00 4.00
6102 6575 7.015584 TGACTACATGATTATACAGGACATGCT 59.984 37.037 0.00 0.00 40.99 3.79
6170 6680 5.454966 AGGGGTGAACACTAAAATTCTTGT 58.545 37.500 4.96 0.00 0.00 3.16
6222 6734 5.438833 TGATCCACATGCTGATCATAAACA 58.561 37.500 18.77 0.00 41.72 2.83
6266 6779 9.893305 ACTATCACATAGTGCTTTTAAAAACAC 57.107 29.630 21.48 21.48 44.07 3.32
6293 6806 7.332530 GCGATCAGTTTATGCAAATTGATTTC 58.667 34.615 9.65 0.82 45.71 2.17
6412 6934 0.469917 TAGCTGCTGGCCCTATTGAC 59.530 55.000 13.43 0.00 43.05 3.18
6423 6945 0.743701 CTGGCTGGAAGTAGCTGCTG 60.744 60.000 13.43 0.00 43.22 4.41
6435 6957 0.833287 AGGCACATAGTACTGGCTGG 59.167 55.000 5.39 0.00 41.48 4.85
6543 7065 0.976073 CACCCACCACCCGAGTCTAT 60.976 60.000 0.00 0.00 0.00 1.98
6644 7201 1.001048 CTTCGACCGCCCGATGTATAA 60.001 52.381 0.00 0.00 38.45 0.98
6866 7425 5.125578 AGGCCTTTAAAATAGCAGCAGTAAC 59.874 40.000 0.00 0.00 0.00 2.50
6867 7426 5.261216 AGGCCTTTAAAATAGCAGCAGTAA 58.739 37.500 0.00 0.00 0.00 2.24
6868 7427 4.855340 AGGCCTTTAAAATAGCAGCAGTA 58.145 39.130 0.00 0.00 0.00 2.74
6902 7461 6.604171 TGTGATATAATGCATTCCACTTCCT 58.396 36.000 16.86 0.00 0.00 3.36
7014 7576 6.013554 TCCTGGCTGGCTATTTATAGTTTT 57.986 37.500 5.39 0.00 35.26 2.43
7028 7590 2.121645 GGATTTGCATCCTGGCTGG 58.878 57.895 3.65 3.65 45.41 4.85
7039 7602 3.477210 ACCGAATAGAGGAGGATTTGC 57.523 47.619 0.00 0.00 0.00 3.68
7064 7627 5.214417 CAAAGCGAAAATTCTGTCATCACA 58.786 37.500 0.00 0.00 0.00 3.58
7137 7704 0.667184 GGCAACCACAAAAGGCATCG 60.667 55.000 0.00 0.00 0.00 3.84
7219 7788 1.833630 TCCACTAGGGACATGAGCAAG 59.166 52.381 0.00 0.00 42.15 4.01
7220 7789 1.951209 TCCACTAGGGACATGAGCAA 58.049 50.000 0.00 0.00 42.15 3.91
7278 7848 6.809630 AAACAAAAAGGAGATGCTAGAGTC 57.190 37.500 0.00 0.00 0.00 3.36
7286 7856 6.419980 TTTGTGCAAAACAAAAAGGAGATG 57.580 33.333 1.33 0.00 44.97 2.90
7291 7861 7.864307 TTCAAATTTGTGCAAAACAAAAAGG 57.136 28.000 17.47 1.59 44.97 3.11
7317 7887 3.090532 GTGGGGGTAGGGAGGCTG 61.091 72.222 0.00 0.00 0.00 4.85
7319 7889 4.433194 AGGTGGGGGTAGGGAGGC 62.433 72.222 0.00 0.00 0.00 4.70
7320 7890 2.040779 GAGGTGGGGGTAGGGAGG 60.041 72.222 0.00 0.00 0.00 4.30
7323 7893 3.362946 ATGGGAGGTGGGGGTAGGG 62.363 68.421 0.00 0.00 0.00 3.53
7324 7894 2.078665 CATGGGAGGTGGGGGTAGG 61.079 68.421 0.00 0.00 0.00 3.18
7325 7895 2.078665 CCATGGGAGGTGGGGGTAG 61.079 68.421 2.85 0.00 32.98 3.18
7326 7896 2.043772 CCATGGGAGGTGGGGGTA 59.956 66.667 2.85 0.00 32.98 3.69
7327 7897 3.967024 TCCATGGGAGGTGGGGGT 61.967 66.667 13.02 0.00 37.34 4.95
7328 7898 3.099170 CTCCATGGGAGGTGGGGG 61.099 72.222 13.02 0.00 45.43 5.40
7336 7906 0.104986 ATCCATCGACCTCCATGGGA 60.105 55.000 13.02 0.24 40.21 4.37
7337 7907 0.767375 AATCCATCGACCTCCATGGG 59.233 55.000 13.02 2.26 40.21 4.00
7338 7908 2.645838 AAATCCATCGACCTCCATGG 57.354 50.000 4.97 4.97 41.04 3.66
7339 7909 3.557898 CCCTAAATCCATCGACCTCCATG 60.558 52.174 0.00 0.00 0.00 3.66
7341 7911 2.047061 CCCTAAATCCATCGACCTCCA 58.953 52.381 0.00 0.00 0.00 3.86
7343 7913 2.434702 ACACCCTAAATCCATCGACCTC 59.565 50.000 0.00 0.00 0.00 3.85
7366 8134 2.352715 GCCTACAACCATTTGTCCTTGC 60.353 50.000 0.00 0.00 42.67 4.01
7373 8141 3.059166 GTTGCAAGCCTACAACCATTTG 58.941 45.455 0.00 0.00 40.19 2.32
7379 8147 0.666374 AACCGTTGCAAGCCTACAAC 59.334 50.000 0.00 3.84 42.15 3.32
7386 8154 3.767287 GGTAGAAACCGTTGCAAGC 57.233 52.632 0.00 0.00 35.62 4.01
7445 8213 0.833287 ACTATCCGTCCTTGCTGCAT 59.167 50.000 1.84 0.00 0.00 3.96
7492 8260 4.098960 CCCATTGAATTTCTAGCACAGCAT 59.901 41.667 0.00 0.00 0.00 3.79
7493 8261 3.444742 CCCATTGAATTTCTAGCACAGCA 59.555 43.478 0.00 0.00 0.00 4.41
7494 8262 3.181483 CCCCATTGAATTTCTAGCACAGC 60.181 47.826 0.00 0.00 0.00 4.40
7495 8263 3.181483 GCCCCATTGAATTTCTAGCACAG 60.181 47.826 0.00 0.00 0.00 3.66
7496 8264 2.760092 GCCCCATTGAATTTCTAGCACA 59.240 45.455 0.00 0.00 0.00 4.57
7497 8265 2.223572 CGCCCCATTGAATTTCTAGCAC 60.224 50.000 0.00 0.00 0.00 4.40
7498 8266 2.023673 CGCCCCATTGAATTTCTAGCA 58.976 47.619 0.00 0.00 0.00 3.49
7499 8267 2.033424 GTCGCCCCATTGAATTTCTAGC 59.967 50.000 0.00 0.00 0.00 3.42
7500 8268 3.278574 TGTCGCCCCATTGAATTTCTAG 58.721 45.455 0.00 0.00 0.00 2.43
7501 8269 3.358111 TGTCGCCCCATTGAATTTCTA 57.642 42.857 0.00 0.00 0.00 2.10
7502 8270 2.214376 TGTCGCCCCATTGAATTTCT 57.786 45.000 0.00 0.00 0.00 2.52
7503 8271 3.004734 CCTATGTCGCCCCATTGAATTTC 59.995 47.826 0.00 0.00 0.00 2.17
7504 8272 2.958355 CCTATGTCGCCCCATTGAATTT 59.042 45.455 0.00 0.00 0.00 1.82
7505 8273 2.174639 TCCTATGTCGCCCCATTGAATT 59.825 45.455 0.00 0.00 0.00 2.17
7506 8274 1.774254 TCCTATGTCGCCCCATTGAAT 59.226 47.619 0.00 0.00 0.00 2.57
7507 8275 1.140852 CTCCTATGTCGCCCCATTGAA 59.859 52.381 0.00 0.00 0.00 2.69
7508 8276 0.758734 CTCCTATGTCGCCCCATTGA 59.241 55.000 0.00 0.00 0.00 2.57
7509 8277 0.250467 CCTCCTATGTCGCCCCATTG 60.250 60.000 0.00 0.00 0.00 2.82
7510 8278 0.399949 TCCTCCTATGTCGCCCCATT 60.400 55.000 0.00 0.00 0.00 3.16
7511 8279 0.399949 TTCCTCCTATGTCGCCCCAT 60.400 55.000 0.00 0.00 0.00 4.00
7512 8280 1.002403 TTCCTCCTATGTCGCCCCA 59.998 57.895 0.00 0.00 0.00 4.96
7513 8281 1.446366 GTTCCTCCTATGTCGCCCC 59.554 63.158 0.00 0.00 0.00 5.80
7514 8282 1.067582 CGTTCCTCCTATGTCGCCC 59.932 63.158 0.00 0.00 0.00 6.13
7515 8283 1.067582 CCGTTCCTCCTATGTCGCC 59.932 63.158 0.00 0.00 0.00 5.54
7516 8284 0.527817 CACCGTTCCTCCTATGTCGC 60.528 60.000 0.00 0.00 0.00 5.19
7517 8285 1.100510 TCACCGTTCCTCCTATGTCG 58.899 55.000 0.00 0.00 0.00 4.35
7518 8286 3.132289 TGATTCACCGTTCCTCCTATGTC 59.868 47.826 0.00 0.00 0.00 3.06
7519 8287 3.104512 TGATTCACCGTTCCTCCTATGT 58.895 45.455 0.00 0.00 0.00 2.29
7520 8288 3.458189 GTGATTCACCGTTCCTCCTATG 58.542 50.000 5.44 0.00 0.00 2.23
7521 8289 2.434702 GGTGATTCACCGTTCCTCCTAT 59.565 50.000 19.65 0.00 44.95 2.57
7522 8290 1.829222 GGTGATTCACCGTTCCTCCTA 59.171 52.381 19.65 0.00 44.95 2.94
7523 8291 0.613777 GGTGATTCACCGTTCCTCCT 59.386 55.000 19.65 0.00 44.95 3.69
7524 8292 3.154589 GGTGATTCACCGTTCCTCC 57.845 57.895 19.65 0.00 44.95 4.30
7533 8301 8.153550 AGGAGTATAAAGATGATGGTGATTCAC 58.846 37.037 8.34 8.34 0.00 3.18
7534 8302 8.267620 AGGAGTATAAAGATGATGGTGATTCA 57.732 34.615 0.00 0.00 0.00 2.57
7563 8331 3.243704 CCATCACCATCAACCGTGTTTTT 60.244 43.478 0.00 0.00 0.00 1.94
7564 8332 2.295909 CCATCACCATCAACCGTGTTTT 59.704 45.455 0.00 0.00 0.00 2.43
7565 8333 1.885887 CCATCACCATCAACCGTGTTT 59.114 47.619 0.00 0.00 0.00 2.83
7566 8334 1.202879 ACCATCACCATCAACCGTGTT 60.203 47.619 0.00 0.00 0.00 3.32
7567 8335 0.400213 ACCATCACCATCAACCGTGT 59.600 50.000 0.00 0.00 0.00 4.49
7568 8336 0.804364 CACCATCACCATCAACCGTG 59.196 55.000 0.00 0.00 0.00 4.94
7569 8337 0.400213 ACACCATCACCATCAACCGT 59.600 50.000 0.00 0.00 0.00 4.83
7570 8338 0.804364 CACACCATCACCATCAACCG 59.196 55.000 0.00 0.00 0.00 4.44
7571 8339 0.527565 GCACACCATCACCATCAACC 59.472 55.000 0.00 0.00 0.00 3.77
7572 8340 0.527565 GGCACACCATCACCATCAAC 59.472 55.000 0.00 0.00 35.26 3.18
7573 8341 0.405198 AGGCACACCATCACCATCAA 59.595 50.000 0.00 0.00 39.06 2.57
7574 8342 0.322726 CAGGCACACCATCACCATCA 60.323 55.000 0.00 0.00 39.06 3.07
7575 8343 1.660560 GCAGGCACACCATCACCATC 61.661 60.000 0.00 0.00 39.06 3.51
7576 8344 1.679977 GCAGGCACACCATCACCAT 60.680 57.895 0.00 0.00 39.06 3.55
7577 8345 2.282391 GCAGGCACACCATCACCA 60.282 61.111 0.00 0.00 39.06 4.17
7578 8346 3.064324 GGCAGGCACACCATCACC 61.064 66.667 0.00 0.00 39.06 4.02
7579 8347 1.589716 GAAGGCAGGCACACCATCAC 61.590 60.000 0.00 0.00 39.06 3.06
7580 8348 1.303561 GAAGGCAGGCACACCATCA 60.304 57.895 0.00 0.00 39.06 3.07
7581 8349 1.001641 AGAAGGCAGGCACACCATC 60.002 57.895 0.00 0.00 39.06 3.51
7582 8350 1.303888 CAGAAGGCAGGCACACCAT 60.304 57.895 0.00 0.00 39.06 3.55
7583 8351 2.113774 CAGAAGGCAGGCACACCA 59.886 61.111 0.00 0.00 39.06 4.17
7584 8352 1.968540 GTCAGAAGGCAGGCACACC 60.969 63.158 0.00 0.00 0.00 4.16
7585 8353 1.968540 GGTCAGAAGGCAGGCACAC 60.969 63.158 0.00 0.00 0.00 3.82
7586 8354 1.782201 ATGGTCAGAAGGCAGGCACA 61.782 55.000 0.00 0.00 0.00 4.57
7587 8355 1.001641 ATGGTCAGAAGGCAGGCAC 60.002 57.895 0.00 0.00 0.00 5.01
7588 8356 1.203441 AGATGGTCAGAAGGCAGGCA 61.203 55.000 0.00 0.00 0.00 4.75
7589 8357 0.463474 GAGATGGTCAGAAGGCAGGC 60.463 60.000 0.00 0.00 0.00 4.85
7590 8358 0.907486 TGAGATGGTCAGAAGGCAGG 59.093 55.000 0.00 0.00 0.00 4.85
7599 8367 0.684535 TTTGACGGCTGAGATGGTCA 59.315 50.000 0.00 0.00 37.61 4.02
7600 8368 1.936547 GATTTGACGGCTGAGATGGTC 59.063 52.381 0.00 0.00 0.00 4.02
7601 8369 1.556911 AGATTTGACGGCTGAGATGGT 59.443 47.619 0.00 0.00 0.00 3.55
7602 8370 1.938577 CAGATTTGACGGCTGAGATGG 59.061 52.381 0.00 0.00 0.00 3.51
7603 8371 2.897436 TCAGATTTGACGGCTGAGATG 58.103 47.619 0.00 0.00 34.02 2.90
7604 8372 3.616956 TTCAGATTTGACGGCTGAGAT 57.383 42.857 0.00 0.00 39.56 2.75
7605 8373 3.067106 GTTTCAGATTTGACGGCTGAGA 58.933 45.455 0.00 0.00 39.56 3.27
7606 8374 2.807967 TGTTTCAGATTTGACGGCTGAG 59.192 45.455 0.00 0.00 39.56 3.35
7607 8375 2.844946 TGTTTCAGATTTGACGGCTGA 58.155 42.857 0.00 0.00 36.92 4.26
7608 8376 3.624326 TTGTTTCAGATTTGACGGCTG 57.376 42.857 0.00 0.00 31.71 4.85
7609 8377 3.548014 CGTTTGTTTCAGATTTGACGGCT 60.548 43.478 0.00 0.00 31.71 5.52
7610 8378 2.719046 CGTTTGTTTCAGATTTGACGGC 59.281 45.455 0.00 0.00 31.71 5.68
7611 8379 3.242936 ACCGTTTGTTTCAGATTTGACGG 60.243 43.478 9.73 9.73 39.80 4.79
7612 8380 3.947626 ACCGTTTGTTTCAGATTTGACG 58.052 40.909 0.00 0.00 31.71 4.35
7613 8381 7.190871 TCTAAACCGTTTGTTTCAGATTTGAC 58.809 34.615 6.77 0.00 43.74 3.18
7614 8382 7.323049 TCTAAACCGTTTGTTTCAGATTTGA 57.677 32.000 6.77 0.00 43.74 2.69
7615 8383 7.860373 TCATCTAAACCGTTTGTTTCAGATTTG 59.140 33.333 6.77 0.00 43.74 2.32
7616 8384 7.860872 GTCATCTAAACCGTTTGTTTCAGATTT 59.139 33.333 6.77 0.00 43.74 2.17
7617 8385 7.360361 GTCATCTAAACCGTTTGTTTCAGATT 58.640 34.615 6.77 0.00 43.74 2.40
7618 8386 6.347402 CGTCATCTAAACCGTTTGTTTCAGAT 60.347 38.462 6.77 3.94 43.74 2.90
7619 8387 5.050634 CGTCATCTAAACCGTTTGTTTCAGA 60.051 40.000 6.77 1.70 43.74 3.27
7620 8388 5.137403 CGTCATCTAAACCGTTTGTTTCAG 58.863 41.667 6.77 0.00 43.74 3.02
7621 8389 4.571580 ACGTCATCTAAACCGTTTGTTTCA 59.428 37.500 6.77 0.00 43.74 2.69
7622 8390 5.086888 ACGTCATCTAAACCGTTTGTTTC 57.913 39.130 6.77 0.00 43.74 2.78
7624 8392 6.258507 ACTTAACGTCATCTAAACCGTTTGTT 59.741 34.615 6.77 3.36 42.75 2.83
7625 8393 5.754890 ACTTAACGTCATCTAAACCGTTTGT 59.245 36.000 6.77 0.17 42.75 2.83
7626 8394 6.219302 ACTTAACGTCATCTAAACCGTTTG 57.781 37.500 6.77 0.00 42.75 2.93
7627 8395 9.638239 TTATACTTAACGTCATCTAAACCGTTT 57.362 29.630 1.40 1.40 42.75 3.60
7628 8396 9.638239 TTTATACTTAACGTCATCTAAACCGTT 57.362 29.630 0.00 0.00 44.69 4.44
7629 8397 9.638239 TTTTATACTTAACGTCATCTAAACCGT 57.362 29.630 0.00 0.00 34.56 4.83
7632 8400 9.911980 GCCTTTTATACTTAACGTCATCTAAAC 57.088 33.333 0.00 0.00 0.00 2.01
7633 8401 9.656040 TGCCTTTTATACTTAACGTCATCTAAA 57.344 29.630 0.00 0.00 0.00 1.85
7634 8402 9.826574 ATGCCTTTTATACTTAACGTCATCTAA 57.173 29.630 0.00 0.00 0.00 2.10
7635 8403 9.472361 GATGCCTTTTATACTTAACGTCATCTA 57.528 33.333 0.00 0.00 0.00 1.98
7636 8404 7.441458 GGATGCCTTTTATACTTAACGTCATCT 59.559 37.037 0.00 0.00 0.00 2.90
7637 8405 7.307811 GGGATGCCTTTTATACTTAACGTCATC 60.308 40.741 0.00 0.00 0.00 2.92
7638 8406 6.485648 GGGATGCCTTTTATACTTAACGTCAT 59.514 38.462 0.00 0.00 0.00 3.06
7639 8407 5.818857 GGGATGCCTTTTATACTTAACGTCA 59.181 40.000 0.00 0.00 0.00 4.35
7640 8408 6.053650 AGGGATGCCTTTTATACTTAACGTC 58.946 40.000 0.00 0.00 0.00 4.34
7641 8409 5.997843 AGGGATGCCTTTTATACTTAACGT 58.002 37.500 0.00 0.00 0.00 3.99
7642 8410 6.766467 AGAAGGGATGCCTTTTATACTTAACG 59.234 38.462 20.64 0.00 0.00 3.18
7643 8411 8.521170 AAGAAGGGATGCCTTTTATACTTAAC 57.479 34.615 20.64 2.98 0.00 2.01
7644 8412 7.778382 GGAAGAAGGGATGCCTTTTATACTTAA 59.222 37.037 20.64 0.00 0.00 1.85
7645 8413 7.092174 TGGAAGAAGGGATGCCTTTTATACTTA 60.092 37.037 20.64 1.84 0.00 2.24
7646 8414 6.129874 GGAAGAAGGGATGCCTTTTATACTT 58.870 40.000 20.64 16.99 0.00 2.24
7647 8415 5.193728 TGGAAGAAGGGATGCCTTTTATACT 59.806 40.000 20.64 9.10 0.00 2.12
7648 8416 5.445964 TGGAAGAAGGGATGCCTTTTATAC 58.554 41.667 20.64 10.47 0.00 1.47
7649 8417 5.725551 TGGAAGAAGGGATGCCTTTTATA 57.274 39.130 20.64 3.60 0.00 0.98
7650 8418 4.608170 TGGAAGAAGGGATGCCTTTTAT 57.392 40.909 20.64 9.26 0.00 1.40
7651 8419 4.086457 GTTGGAAGAAGGGATGCCTTTTA 58.914 43.478 20.64 0.00 0.00 1.52
7652 8420 2.899900 GTTGGAAGAAGGGATGCCTTTT 59.100 45.455 20.64 11.96 0.00 2.27
7653 8421 2.110721 AGTTGGAAGAAGGGATGCCTTT 59.889 45.455 20.64 4.75 0.00 3.11
7654 8422 1.713078 AGTTGGAAGAAGGGATGCCTT 59.287 47.619 19.76 19.76 0.00 4.35
7655 8423 1.283321 GAGTTGGAAGAAGGGATGCCT 59.717 52.381 0.00 0.00 0.00 4.75
7656 8424 1.004745 TGAGTTGGAAGAAGGGATGCC 59.995 52.381 0.00 0.00 0.00 4.40
7657 8425 2.496899 TGAGTTGGAAGAAGGGATGC 57.503 50.000 0.00 0.00 0.00 3.91
7670 8438 0.816825 CCTCATCGGGCCATGAGTTG 60.817 60.000 28.46 18.32 45.91 3.16
7671 8439 1.528824 CCTCATCGGGCCATGAGTT 59.471 57.895 28.46 0.00 45.91 3.01
7672 8440 3.234349 CCTCATCGGGCCATGAGT 58.766 61.111 28.46 3.70 45.91 3.41
7690 8458 2.050934 AGAAGGCGGTCGAGGGTAC 61.051 63.158 0.00 0.00 0.00 3.34
7691 8459 2.050350 CAGAAGGCGGTCGAGGGTA 61.050 63.158 0.00 0.00 0.00 3.69
7692 8460 3.382832 CAGAAGGCGGTCGAGGGT 61.383 66.667 0.00 0.00 0.00 4.34
7693 8461 4.148825 CCAGAAGGCGGTCGAGGG 62.149 72.222 0.00 0.00 0.00 4.30
7694 8462 1.961180 AATCCAGAAGGCGGTCGAGG 61.961 60.000 0.00 0.00 33.74 4.63
7695 8463 0.744874 TAATCCAGAAGGCGGTCGAG 59.255 55.000 0.00 0.00 33.74 4.04
7696 8464 0.744874 CTAATCCAGAAGGCGGTCGA 59.255 55.000 0.00 0.00 33.74 4.20
7697 8465 0.876342 GCTAATCCAGAAGGCGGTCG 60.876 60.000 0.00 0.00 33.74 4.79
7698 8466 0.533085 GGCTAATCCAGAAGGCGGTC 60.533 60.000 0.00 0.00 33.74 4.79
7699 8467 1.527370 GGCTAATCCAGAAGGCGGT 59.473 57.895 0.00 0.00 33.74 5.68
7700 8468 4.464262 GGCTAATCCAGAAGGCGG 57.536 61.111 0.00 0.00 33.74 6.13
7702 8470 1.517242 CATCGGCTAATCCAGAAGGC 58.483 55.000 0.00 0.00 35.08 4.35
7703 8471 1.517242 GCATCGGCTAATCCAGAAGG 58.483 55.000 0.00 0.00 36.96 3.46
7704 8472 1.143305 CGCATCGGCTAATCCAGAAG 58.857 55.000 0.00 0.00 38.10 2.85
7705 8473 0.880278 GCGCATCGGCTAATCCAGAA 60.880 55.000 0.30 0.00 38.10 3.02
7706 8474 1.300931 GCGCATCGGCTAATCCAGA 60.301 57.895 0.30 0.00 38.10 3.86
7707 8475 2.661566 CGCGCATCGGCTAATCCAG 61.662 63.158 8.75 0.00 38.10 3.86
7708 8476 2.661537 CGCGCATCGGCTAATCCA 60.662 61.111 8.75 0.00 38.10 3.41
7717 8485 4.799473 CTGTTGTGCCGCGCATCG 62.799 66.667 8.75 0.00 41.91 3.84
7726 8494 2.360475 GGAGAGGGGCTGTTGTGC 60.360 66.667 0.00 0.00 0.00 4.57
7727 8495 1.298014 GAGGAGAGGGGCTGTTGTG 59.702 63.158 0.00 0.00 0.00 3.33
7728 8496 1.920835 GGAGGAGAGGGGCTGTTGT 60.921 63.158 0.00 0.00 0.00 3.32
7729 8497 1.908340 CTGGAGGAGAGGGGCTGTTG 61.908 65.000 0.00 0.00 0.00 3.33
7730 8498 1.614824 CTGGAGGAGAGGGGCTGTT 60.615 63.158 0.00 0.00 0.00 3.16
7731 8499 1.895886 ATCTGGAGGAGAGGGGCTGT 61.896 60.000 0.00 0.00 32.80 4.40
7732 8500 1.074623 ATCTGGAGGAGAGGGGCTG 60.075 63.158 0.00 0.00 32.80 4.85
7733 8501 1.074623 CATCTGGAGGAGAGGGGCT 60.075 63.158 0.00 0.00 32.80 5.19
7734 8502 3.560989 CATCTGGAGGAGAGGGGC 58.439 66.667 0.00 0.00 32.80 5.80
7744 8512 1.371467 TTCAAAGGGCTCCATCTGGA 58.629 50.000 0.00 0.00 43.08 3.86
7745 8513 2.305009 GATTCAAAGGGCTCCATCTGG 58.695 52.381 0.00 0.00 0.00 3.86
7746 8514 2.305009 GGATTCAAAGGGCTCCATCTG 58.695 52.381 0.00 0.00 0.00 2.90
7747 8515 1.216427 GGGATTCAAAGGGCTCCATCT 59.784 52.381 0.00 0.00 0.00 2.90
7748 8516 1.216427 AGGGATTCAAAGGGCTCCATC 59.784 52.381 0.00 0.00 0.00 3.51
7749 8517 1.312884 AGGGATTCAAAGGGCTCCAT 58.687 50.000 0.00 0.00 0.00 3.41
7750 8518 1.979809 TAGGGATTCAAAGGGCTCCA 58.020 50.000 0.00 0.00 0.00 3.86
7751 8519 3.560239 GCTATAGGGATTCAAAGGGCTCC 60.560 52.174 1.04 0.00 0.00 4.70
7752 8520 3.073062 TGCTATAGGGATTCAAAGGGCTC 59.927 47.826 1.04 0.00 0.00 4.70
7753 8521 3.056080 TGCTATAGGGATTCAAAGGGCT 58.944 45.455 1.04 0.00 0.00 5.19
7754 8522 3.073062 TCTGCTATAGGGATTCAAAGGGC 59.927 47.826 1.04 0.00 0.00 5.19
7755 8523 4.349342 AGTCTGCTATAGGGATTCAAAGGG 59.651 45.833 1.04 0.00 0.00 3.95
7756 8524 5.559148 AGTCTGCTATAGGGATTCAAAGG 57.441 43.478 1.04 0.00 0.00 3.11
7757 8525 6.162777 GCTAGTCTGCTATAGGGATTCAAAG 58.837 44.000 1.04 0.00 0.00 2.77
7758 8526 5.602561 TGCTAGTCTGCTATAGGGATTCAAA 59.397 40.000 1.04 0.00 0.00 2.69
7759 8527 5.147767 TGCTAGTCTGCTATAGGGATTCAA 58.852 41.667 1.04 0.00 0.00 2.69
7760 8528 4.740902 TGCTAGTCTGCTATAGGGATTCA 58.259 43.478 1.04 0.00 0.00 2.57
7761 8529 4.381505 GCTGCTAGTCTGCTATAGGGATTC 60.382 50.000 1.04 0.00 36.79 2.52
7762 8530 3.513515 GCTGCTAGTCTGCTATAGGGATT 59.486 47.826 1.04 0.00 36.79 3.01
7763 8531 3.096092 GCTGCTAGTCTGCTATAGGGAT 58.904 50.000 1.04 0.00 36.79 3.85
7764 8532 2.520069 GCTGCTAGTCTGCTATAGGGA 58.480 52.381 1.04 0.00 36.79 4.20
7765 8533 1.201181 CGCTGCTAGTCTGCTATAGGG 59.799 57.143 1.04 0.00 37.48 3.53
7766 8534 1.201181 CCGCTGCTAGTCTGCTATAGG 59.799 57.143 1.04 4.80 37.48 2.57
7767 8535 1.402194 GCCGCTGCTAGTCTGCTATAG 60.402 57.143 0.00 0.00 37.48 1.31
7768 8536 0.598562 GCCGCTGCTAGTCTGCTATA 59.401 55.000 0.00 0.00 37.48 1.31
7769 8537 1.365633 GCCGCTGCTAGTCTGCTAT 59.634 57.895 0.00 0.00 37.48 2.97
7770 8538 2.808315 GCCGCTGCTAGTCTGCTA 59.192 61.111 0.00 0.00 37.48 3.49
7783 8551 2.202946 GGTAGGAGAAGCAGCCGC 60.203 66.667 0.00 0.00 38.99 6.53
7784 8552 2.105128 CGGTAGGAGAAGCAGCCG 59.895 66.667 0.00 0.00 0.00 5.52
7785 8553 2.058595 TCCGGTAGGAGAAGCAGCC 61.059 63.158 0.00 0.00 42.75 4.85
7786 8554 3.617368 TCCGGTAGGAGAAGCAGC 58.383 61.111 0.00 0.00 42.75 5.25
7794 8562 1.108776 CGGTCATTCTTCCGGTAGGA 58.891 55.000 8.37 0.00 46.75 2.94
7795 8563 1.108776 TCGGTCATTCTTCCGGTAGG 58.891 55.000 8.37 0.00 45.79 3.18
7796 8564 2.426024 TCTTCGGTCATTCTTCCGGTAG 59.574 50.000 0.00 0.00 45.79 3.18
7797 8565 2.449464 TCTTCGGTCATTCTTCCGGTA 58.551 47.619 0.00 0.00 45.79 4.02
7798 8566 1.263356 TCTTCGGTCATTCTTCCGGT 58.737 50.000 0.00 0.00 45.79 5.28
7799 8567 2.271800 CTTCTTCGGTCATTCTTCCGG 58.728 52.381 0.00 0.00 45.79 5.14
7800 8568 2.271800 CCTTCTTCGGTCATTCTTCCG 58.728 52.381 0.00 0.00 46.93 4.30
7801 8569 3.336138 ACCTTCTTCGGTCATTCTTCC 57.664 47.619 0.00 0.00 29.14 3.46
7802 8570 4.083271 CCAAACCTTCTTCGGTCATTCTTC 60.083 45.833 0.00 0.00 35.89 2.87
7803 8571 3.821033 CCAAACCTTCTTCGGTCATTCTT 59.179 43.478 0.00 0.00 35.89 2.52
7804 8572 3.181443 ACCAAACCTTCTTCGGTCATTCT 60.181 43.478 0.00 0.00 35.89 2.40
7805 8573 3.058224 CACCAAACCTTCTTCGGTCATTC 60.058 47.826 0.00 0.00 35.89 2.67
7806 8574 2.884639 CACCAAACCTTCTTCGGTCATT 59.115 45.455 0.00 0.00 35.89 2.57
7807 8575 2.504367 CACCAAACCTTCTTCGGTCAT 58.496 47.619 0.00 0.00 35.89 3.06
7808 8576 1.476110 CCACCAAACCTTCTTCGGTCA 60.476 52.381 0.00 0.00 35.89 4.02
7809 8577 1.235724 CCACCAAACCTTCTTCGGTC 58.764 55.000 0.00 0.00 35.89 4.79
7810 8578 0.549469 ACCACCAAACCTTCTTCGGT 59.451 50.000 0.00 0.00 39.48 4.69
7811 8579 0.951558 CACCACCAAACCTTCTTCGG 59.048 55.000 0.00 0.00 0.00 4.30
7812 8580 0.951558 CCACCACCAAACCTTCTTCG 59.048 55.000 0.00 0.00 0.00 3.79
7813 8581 1.681264 CACCACCACCAAACCTTCTTC 59.319 52.381 0.00 0.00 0.00 2.87
7814 8582 1.775385 CACCACCACCAAACCTTCTT 58.225 50.000 0.00 0.00 0.00 2.52
7815 8583 0.755327 GCACCACCACCAAACCTTCT 60.755 55.000 0.00 0.00 0.00 2.85
7816 8584 1.739667 GCACCACCACCAAACCTTC 59.260 57.895 0.00 0.00 0.00 3.46
7817 8585 2.124693 CGCACCACCACCAAACCTT 61.125 57.895 0.00 0.00 0.00 3.50
7818 8586 2.351924 ATCGCACCACCACCAAACCT 62.352 55.000 0.00 0.00 0.00 3.50
7819 8587 1.460273 AATCGCACCACCACCAAACC 61.460 55.000 0.00 0.00 0.00 3.27
7820 8588 0.387565 AAATCGCACCACCACCAAAC 59.612 50.000 0.00 0.00 0.00 2.93
7821 8589 1.609555 GTAAATCGCACCACCACCAAA 59.390 47.619 0.00 0.00 0.00 3.28
7822 8590 1.202830 AGTAAATCGCACCACCACCAA 60.203 47.619 0.00 0.00 0.00 3.67
7823 8591 0.398696 AGTAAATCGCACCACCACCA 59.601 50.000 0.00 0.00 0.00 4.17
7824 8592 1.467342 GAAGTAAATCGCACCACCACC 59.533 52.381 0.00 0.00 0.00 4.61
7825 8593 2.415512 GAGAAGTAAATCGCACCACCAC 59.584 50.000 0.00 0.00 0.00 4.16
7826 8594 2.614481 GGAGAAGTAAATCGCACCACCA 60.614 50.000 0.00 0.00 0.00 4.17
7827 8595 2.007608 GGAGAAGTAAATCGCACCACC 58.992 52.381 0.00 0.00 0.00 4.61
7828 8596 2.695359 TGGAGAAGTAAATCGCACCAC 58.305 47.619 0.00 0.00 0.00 4.16
7829 8597 3.410631 TTGGAGAAGTAAATCGCACCA 57.589 42.857 0.00 0.00 0.00 4.17
7830 8598 4.192317 AGATTGGAGAAGTAAATCGCACC 58.808 43.478 0.00 0.00 35.83 5.01
7831 8599 5.396750 GAGATTGGAGAAGTAAATCGCAC 57.603 43.478 0.00 0.00 35.83 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.