Multiple sequence alignment - TraesCS7D01G437500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G437500 chr7D 100.000 4634 0 0 1 4634 556720773 556716140 0.000000e+00 8558.0
1 TraesCS7D01G437500 chr7D 87.231 2835 315 28 848 3671 541967192 541964394 0.000000e+00 3186.0
2 TraesCS7D01G437500 chr7D 85.272 2356 316 18 1354 3692 542099621 542097280 0.000000e+00 2399.0
3 TraesCS7D01G437500 chr7D 82.009 2479 382 35 1169 3611 543627150 543624700 0.000000e+00 2049.0
4 TraesCS7D01G437500 chr7D 92.308 117 9 0 3692 3808 4241818 4241702 2.870000e-37 167.0
5 TraesCS7D01G437500 chr7D 80.105 191 18 11 3810 3984 541964375 541964189 1.750000e-24 124.0
6 TraesCS7D01G437500 chr7D 87.209 86 10 1 441 525 541964270 541964185 3.820000e-16 97.1
7 TraesCS7D01G437500 chr7A 96.053 3243 98 14 440 3676 642328152 642324934 0.000000e+00 5252.0
8 TraesCS7D01G437500 chr7A 82.343 2424 377 34 1177 3570 625535241 625532839 0.000000e+00 2058.0
9 TraesCS7D01G437500 chr7A 83.705 1436 223 9 1174 2605 735764814 735763386 0.000000e+00 1345.0
10 TraesCS7D01G437500 chr7A 90.592 287 26 1 1 286 642328443 642328157 3.380000e-101 379.0
11 TraesCS7D01G437500 chr7A 80.208 192 18 11 3809 3984 624821065 624820878 4.870000e-25 126.0
12 TraesCS7D01G437500 chr7A 90.000 80 8 0 441 520 624820959 624820880 2.280000e-18 104.0
13 TraesCS7D01G437500 chr7A 89.474 76 8 0 4502 4577 727225405 727225480 3.820000e-16 97.1
14 TraesCS7D01G437500 chr7B 92.312 3304 155 44 441 3693 604101549 604098294 0.000000e+00 4602.0
15 TraesCS7D01G437500 chr7B 84.663 1956 260 26 848 2794 585515465 585513541 0.000000e+00 1914.0
16 TraesCS7D01G437500 chr7B 91.447 947 76 4 2734 3677 585579365 585578421 0.000000e+00 1295.0
17 TraesCS7D01G437500 chr7B 88.163 566 49 4 3942 4507 604098107 604097560 0.000000e+00 658.0
18 TraesCS7D01G437500 chr7B 87.261 157 12 6 292 443 142032114 142031961 6.160000e-39 172.0
19 TraesCS7D01G437500 chr7B 90.678 118 11 0 3692 3809 78550033 78550150 1.730000e-34 158.0
20 TraesCS7D01G437500 chrUn 86.381 2401 315 9 1174 3568 88864142 88866536 0.000000e+00 2612.0
21 TraesCS7D01G437500 chrUn 86.152 2022 267 10 1174 3188 88843071 88845086 0.000000e+00 2170.0
22 TraesCS7D01G437500 chrUn 86.832 1739 210 12 1941 3671 365696699 365694972 0.000000e+00 1925.0
23 TraesCS7D01G437500 chrUn 86.047 172 10 1 285 442 24831242 24831413 6.160000e-39 172.0
24 TraesCS7D01G437500 chrUn 96.078 51 2 0 4502 4552 76237068 76237018 2.970000e-12 84.2
25 TraesCS7D01G437500 chr1A 92.994 157 7 3 290 442 584471978 584472134 4.670000e-55 226.0
26 TraesCS7D01G437500 chr1A 91.096 146 11 1 292 437 491646463 491646606 3.660000e-46 196.0
27 TraesCS7D01G437500 chr1A 87.574 169 7 1 288 442 586112581 586112413 2.850000e-42 183.0
28 TraesCS7D01G437500 chr1A 85.802 162 19 2 285 442 588952023 588951862 7.970000e-38 169.0
29 TraesCS7D01G437500 chr2B 89.873 158 10 3 292 443 310105411 310105254 1.020000e-46 198.0
30 TraesCS7D01G437500 chr2B 90.164 122 12 0 3688 3809 212019885 212020006 4.800000e-35 159.0
31 TraesCS7D01G437500 chr3B 88.068 176 6 5 283 443 637083946 637083771 1.320000e-45 195.0
32 TraesCS7D01G437500 chr3B 93.162 117 8 0 3693 3809 309414739 309414855 6.160000e-39 172.0
33 TraesCS7D01G437500 chr3B 88.281 128 13 2 3691 3817 828461787 828461661 8.030000e-33 152.0
34 TraesCS7D01G437500 chr1D 87.791 172 7 5 288 445 199867006 199866835 6.120000e-44 189.0
35 TraesCS7D01G437500 chr5B 88.961 154 14 3 292 443 331012980 331013132 2.200000e-43 187.0
36 TraesCS7D01G437500 chr4D 87.429 175 7 2 284 444 93336855 93336682 2.200000e-43 187.0
37 TraesCS7D01G437500 chr4D 93.162 117 8 0 3692 3808 400680682 400680566 6.160000e-39 172.0
38 TraesCS7D01G437500 chr5D 87.975 158 13 1 291 442 361671867 361671710 1.020000e-41 182.0
39 TraesCS7D01G437500 chr5D 93.860 114 5 2 285 397 64274893 64275005 2.220000e-38 171.0
40 TraesCS7D01G437500 chr2D 87.342 158 14 5 291 442 53648072 53648229 4.770000e-40 176.0
41 TraesCS7D01G437500 chr2D 92.308 117 9 0 3692 3808 428670018 428669902 2.870000e-37 167.0
42 TraesCS7D01G437500 chr2D 100.000 28 0 0 4607 4634 15739430 15739457 8.000000e-03 52.8
43 TraesCS7D01G437500 chr5A 93.220 118 7 1 3692 3808 561976163 561976280 6.160000e-39 172.0
44 TraesCS7D01G437500 chr6B 86.538 156 17 2 288 443 690756012 690756163 7.970000e-38 169.0
45 TraesCS7D01G437500 chr2A 92.373 118 8 1 3692 3808 718227896 718227779 2.870000e-37 167.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G437500 chr7D 556716140 556720773 4633 True 8558.0 8558 100.000000 1 4634 1 chr7D.!!$R4 4633
1 TraesCS7D01G437500 chr7D 542097280 542099621 2341 True 2399.0 2399 85.272000 1354 3692 1 chr7D.!!$R2 2338
2 TraesCS7D01G437500 chr7D 543624700 543627150 2450 True 2049.0 2049 82.009000 1169 3611 1 chr7D.!!$R3 2442
3 TraesCS7D01G437500 chr7D 541964185 541967192 3007 True 1135.7 3186 84.848333 441 3984 3 chr7D.!!$R5 3543
4 TraesCS7D01G437500 chr7A 642324934 642328443 3509 True 2815.5 5252 93.322500 1 3676 2 chr7A.!!$R4 3675
5 TraesCS7D01G437500 chr7A 625532839 625535241 2402 True 2058.0 2058 82.343000 1177 3570 1 chr7A.!!$R1 2393
6 TraesCS7D01G437500 chr7A 735763386 735764814 1428 True 1345.0 1345 83.705000 1174 2605 1 chr7A.!!$R2 1431
7 TraesCS7D01G437500 chr7B 604097560 604101549 3989 True 2630.0 4602 90.237500 441 4507 2 chr7B.!!$R4 4066
8 TraesCS7D01G437500 chr7B 585513541 585515465 1924 True 1914.0 1914 84.663000 848 2794 1 chr7B.!!$R2 1946
9 TraesCS7D01G437500 chr7B 585578421 585579365 944 True 1295.0 1295 91.447000 2734 3677 1 chr7B.!!$R3 943
10 TraesCS7D01G437500 chrUn 88864142 88866536 2394 False 2612.0 2612 86.381000 1174 3568 1 chrUn.!!$F3 2394
11 TraesCS7D01G437500 chrUn 88843071 88845086 2015 False 2170.0 2170 86.152000 1174 3188 1 chrUn.!!$F2 2014
12 TraesCS7D01G437500 chrUn 365694972 365696699 1727 True 1925.0 1925 86.832000 1941 3671 1 chrUn.!!$R2 1730

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
156 157 0.098728 GTTGATCGGCCAACAATCGG 59.901 55.000 2.24 0.00 44.22 4.18 F
1359 1435 0.108585 ACACTGCCAACTGGTACCTG 59.891 55.000 16.66 16.66 37.57 4.00 F
1504 1588 1.134098 ACCGGTCTGCCAAATCCATAG 60.134 52.381 0.00 0.00 34.09 2.23 F
1761 1852 1.377333 GCAGTTAGACCCCAGTGGC 60.377 63.158 2.61 0.00 37.83 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1799 1890 1.292223 CCGGTGGACCAGTAGTGTG 59.708 63.158 0.0 0.0 35.14 3.82 R
3204 3306 2.289195 TGGTGTAATGTGAACTCCCGTC 60.289 50.000 0.0 0.0 30.99 4.79 R
3308 3410 5.338300 GGAAAATAAACATCAGGGTTGCCAT 60.338 40.000 0.0 0.0 0.00 4.40 R
3711 3822 2.783135 ACATCCATTTCGCTGACAAGT 58.217 42.857 0.0 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.712122 TTTTCCCTAACGCCAATTCATC 57.288 40.909 0.00 0.00 0.00 2.92
45 46 7.254863 GCCAATTCATCATTTTGTTGTTGAAGT 60.255 33.333 0.00 0.00 38.21 3.01
66 67 7.450014 TGAAGTTAGGTTTCAAATATTGCTGGA 59.550 33.333 0.00 0.00 31.98 3.86
68 69 9.474313 AAGTTAGGTTTCAAATATTGCTGGATA 57.526 29.630 0.00 0.00 0.00 2.59
97 98 8.613060 ATGATAACATGTATTCATCTGTCCAC 57.387 34.615 14.56 0.00 35.21 4.02
111 112 1.485480 TGTCCACGGTTACAAGGTTGA 59.515 47.619 0.00 0.00 0.00 3.18
112 113 2.140717 GTCCACGGTTACAAGGTTGAG 58.859 52.381 0.00 0.00 0.00 3.02
127 128 1.291184 TTGAGCGTTGGTGCATCGAG 61.291 55.000 0.00 0.00 37.31 4.04
142 143 4.040829 TGCATCGAGGATGATAAGGTTGAT 59.959 41.667 0.00 0.00 42.09 2.57
156 157 0.098728 GTTGATCGGCCAACAATCGG 59.901 55.000 2.24 0.00 44.22 4.18
164 165 2.397751 CCAACAATCGGGCAGCTAG 58.602 57.895 0.00 0.00 0.00 3.42
179 180 3.684788 GCAGCTAGTTCGGATTCTTGAAA 59.315 43.478 0.00 0.00 0.00 2.69
199 200 5.645067 TGAAAGGCTAGTTGAGATCACAATG 59.355 40.000 8.86 4.46 32.36 2.82
200 201 3.539604 AGGCTAGTTGAGATCACAATGC 58.460 45.455 8.86 12.55 32.36 3.56
204 205 1.637553 AGTTGAGATCACAATGCCCCT 59.362 47.619 8.86 0.00 32.36 4.79
205 206 1.747355 GTTGAGATCACAATGCCCCTG 59.253 52.381 8.86 0.00 32.36 4.45
207 208 1.848388 TGAGATCACAATGCCCCTGAT 59.152 47.619 0.00 0.00 0.00 2.90
286 288 5.918011 TGTTTCGGAAAAATGAGTTGCATAC 59.082 36.000 4.46 0.00 35.78 2.39
288 290 4.075682 TCGGAAAAATGAGTTGCATACCA 58.924 39.130 0.00 0.00 35.78 3.25
289 291 4.704540 TCGGAAAAATGAGTTGCATACCAT 59.295 37.500 0.00 0.00 35.78 3.55
290 292 4.799949 CGGAAAAATGAGTTGCATACCATG 59.200 41.667 0.00 0.00 35.78 3.66
291 293 5.622007 CGGAAAAATGAGTTGCATACCATGT 60.622 40.000 0.00 0.00 35.78 3.21
292 294 6.404184 CGGAAAAATGAGTTGCATACCATGTA 60.404 38.462 0.00 0.00 35.78 2.29
293 295 6.751888 GGAAAAATGAGTTGCATACCATGTAC 59.248 38.462 0.00 0.00 35.78 2.90
294 296 7.362920 GGAAAAATGAGTTGCATACCATGTACT 60.363 37.037 0.00 0.00 35.78 2.73
295 297 7.466746 AAAATGAGTTGCATACCATGTACTT 57.533 32.000 0.00 0.00 35.78 2.24
296 298 6.683974 AATGAGTTGCATACCATGTACTTC 57.316 37.500 0.00 0.00 35.78 3.01
297 299 4.513442 TGAGTTGCATACCATGTACTTCC 58.487 43.478 0.00 0.00 30.93 3.46
298 300 4.225042 TGAGTTGCATACCATGTACTTCCT 59.775 41.667 0.00 0.00 30.93 3.36
299 301 4.770795 AGTTGCATACCATGTACTTCCTC 58.229 43.478 0.00 0.00 0.00 3.71
300 302 3.838244 TGCATACCATGTACTTCCTCC 57.162 47.619 0.00 0.00 0.00 4.30
301 303 2.102420 TGCATACCATGTACTTCCTCCG 59.898 50.000 0.00 0.00 0.00 4.63
302 304 2.102588 GCATACCATGTACTTCCTCCGT 59.897 50.000 0.00 0.00 0.00 4.69
303 305 3.431766 GCATACCATGTACTTCCTCCGTT 60.432 47.826 0.00 0.00 0.00 4.44
304 306 4.369182 CATACCATGTACTTCCTCCGTTC 58.631 47.826 0.00 0.00 0.00 3.95
305 307 1.553704 ACCATGTACTTCCTCCGTTCC 59.446 52.381 0.00 0.00 0.00 3.62
306 308 1.831736 CCATGTACTTCCTCCGTTCCT 59.168 52.381 0.00 0.00 0.00 3.36
307 309 3.028850 CCATGTACTTCCTCCGTTCCTA 58.971 50.000 0.00 0.00 0.00 2.94
308 310 3.449737 CCATGTACTTCCTCCGTTCCTAA 59.550 47.826 0.00 0.00 0.00 2.69
309 311 4.081309 CCATGTACTTCCTCCGTTCCTAAA 60.081 45.833 0.00 0.00 0.00 1.85
310 312 5.396436 CCATGTACTTCCTCCGTTCCTAAAT 60.396 44.000 0.00 0.00 0.00 1.40
311 313 6.183360 CCATGTACTTCCTCCGTTCCTAAATA 60.183 42.308 0.00 0.00 0.00 1.40
312 314 7.442656 CATGTACTTCCTCCGTTCCTAAATAT 58.557 38.462 0.00 0.00 0.00 1.28
313 315 8.582437 CATGTACTTCCTCCGTTCCTAAATATA 58.418 37.037 0.00 0.00 0.00 0.86
314 316 8.537728 TGTACTTCCTCCGTTCCTAAATATAA 57.462 34.615 0.00 0.00 0.00 0.98
315 317 8.636213 TGTACTTCCTCCGTTCCTAAATATAAG 58.364 37.037 0.00 0.00 0.00 1.73
316 318 7.672122 ACTTCCTCCGTTCCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
317 319 7.724287 ACTTCCTCCGTTCCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
318 320 7.564292 ACTTCCTCCGTTCCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
319 321 7.909485 TCCTCCGTTCCTAAATATAAGTCTT 57.091 36.000 0.00 0.00 0.00 3.01
320 322 8.315220 TCCTCCGTTCCTAAATATAAGTCTTT 57.685 34.615 0.00 0.00 0.00 2.52
321 323 8.765517 TCCTCCGTTCCTAAATATAAGTCTTTT 58.234 33.333 0.00 0.00 0.00 2.27
322 324 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
339 341 9.750125 AAGTCTTTTTAGACATTTCAAATGGAC 57.250 29.630 14.70 8.92 41.02 4.02
340 342 9.136323 AGTCTTTTTAGACATTTCAAATGGACT 57.864 29.630 14.70 14.18 41.02 3.85
345 347 9.959749 TTTTAGACATTTCAAATGGACTACAAC 57.040 29.630 14.70 0.00 0.00 3.32
346 348 8.684386 TTAGACATTTCAAATGGACTACAACA 57.316 30.769 14.70 1.25 0.00 3.33
347 349 7.765695 AGACATTTCAAATGGACTACAACAT 57.234 32.000 14.70 0.00 0.00 2.71
348 350 8.862325 AGACATTTCAAATGGACTACAACATA 57.138 30.769 14.70 0.00 0.00 2.29
349 351 8.730680 AGACATTTCAAATGGACTACAACATAC 58.269 33.333 14.70 0.00 0.00 2.39
350 352 7.526608 ACATTTCAAATGGACTACAACATACG 58.473 34.615 14.70 0.00 0.00 3.06
351 353 6.489127 TTTCAAATGGACTACAACATACGG 57.511 37.500 0.00 0.00 0.00 4.02
352 354 5.408880 TCAAATGGACTACAACATACGGA 57.591 39.130 0.00 0.00 0.00 4.69
353 355 5.984725 TCAAATGGACTACAACATACGGAT 58.015 37.500 0.00 0.00 0.00 4.18
354 356 5.815222 TCAAATGGACTACAACATACGGATG 59.185 40.000 5.94 5.94 39.16 3.51
356 358 6.474140 AATGGACTACAACATACGGATGTA 57.526 37.500 15.10 0.00 45.93 2.29
357 359 6.665992 ATGGACTACAACATACGGATGTAT 57.334 37.500 15.10 8.21 45.93 2.29
399 401 9.950496 AGTATAGATTCACTCATTTTCACTTGT 57.050 29.630 0.00 0.00 0.00 3.16
402 404 7.572523 AGATTCACTCATTTTCACTTGTTGA 57.427 32.000 0.00 0.00 0.00 3.18
403 405 7.999679 AGATTCACTCATTTTCACTTGTTGAA 58.000 30.769 0.00 0.00 42.83 2.69
434 436 9.689501 ATAAAAAGACTTATATTTGGGAACGGA 57.310 29.630 0.00 0.00 0.00 4.69
435 437 7.625828 AAAAGACTTATATTTGGGAACGGAG 57.374 36.000 0.00 0.00 0.00 4.63
436 438 5.291905 AGACTTATATTTGGGAACGGAGG 57.708 43.478 0.00 0.00 0.00 4.30
437 439 4.102681 AGACTTATATTTGGGAACGGAGGG 59.897 45.833 0.00 0.00 0.00 4.30
438 440 4.042174 ACTTATATTTGGGAACGGAGGGA 58.958 43.478 0.00 0.00 0.00 4.20
455 457 5.119694 GGAGGGAGTATTTCAGTTTAGCTG 58.880 45.833 0.00 0.00 46.34 4.24
469 471 9.502091 TTCAGTTTAGCTGTACTTAACATGAAT 57.498 29.630 0.00 0.00 45.23 2.57
650 652 1.495951 GATGGCACGGTCACGAAAC 59.504 57.895 0.00 0.00 44.60 2.78
674 677 2.813179 CGTGCCGGCAATGCTACTC 61.813 63.158 34.66 15.50 0.00 2.59
678 681 1.149174 CCGGCAATGCTACTCCCAT 59.851 57.895 4.82 0.00 0.00 4.00
686 689 1.884926 GCTACTCCCATGACAGCGC 60.885 63.158 0.00 0.00 0.00 5.92
687 690 1.589993 CTACTCCCATGACAGCGCG 60.590 63.158 0.00 0.00 0.00 6.86
697 700 1.807165 GACAGCGCGCTCATCTTCA 60.807 57.895 34.28 0.00 0.00 3.02
728 735 8.983702 TGTATCCCATAAACCCAAACTATTAC 57.016 34.615 0.00 0.00 0.00 1.89
729 736 7.716123 TGTATCCCATAAACCCAAACTATTACG 59.284 37.037 0.00 0.00 0.00 3.18
730 737 6.064735 TCCCATAAACCCAAACTATTACGT 57.935 37.500 0.00 0.00 0.00 3.57
835 843 7.996644 TGGGTATCTGAACTTTAGACAGTTTTT 59.003 33.333 0.00 0.00 37.11 1.94
836 844 9.498176 GGGTATCTGAACTTTAGACAGTTTTTA 57.502 33.333 0.00 0.00 37.11 1.52
843 851 8.846211 TGAACTTTAGACAGTTTTTAATCTGGG 58.154 33.333 5.75 0.00 37.11 4.45
844 852 7.761038 ACTTTAGACAGTTTTTAATCTGGGG 57.239 36.000 5.75 0.00 36.17 4.96
852 886 6.099341 CAGTTTTTAATCTGGGGTATGCAAC 58.901 40.000 0.00 0.00 0.00 4.17
853 887 6.016555 AGTTTTTAATCTGGGGTATGCAACT 58.983 36.000 0.00 0.00 0.00 3.16
873 909 4.749310 CTCTTCTGGCCTGCGCGT 62.749 66.667 8.43 0.00 35.02 6.01
901 937 2.341101 GGAGGAGAGCGACGACCAA 61.341 63.158 0.00 0.00 0.00 3.67
909 945 1.659098 GAGCGACGACCAAATTTCGAT 59.341 47.619 0.00 0.00 39.83 3.59
913 949 3.665848 GCGACGACCAAATTTCGATTTCA 60.666 43.478 0.00 0.00 39.83 2.69
915 951 4.317291 CGACGACCAAATTTCGATTTCAAC 59.683 41.667 5.09 0.00 39.83 3.18
1067 1125 3.569701 ACTAGTTTGGATGTTGTGCTTGG 59.430 43.478 0.00 0.00 0.00 3.61
1132 1190 0.249031 GCCTCTGCACAACAACAACC 60.249 55.000 0.00 0.00 37.47 3.77
1359 1435 0.108585 ACACTGCCAACTGGTACCTG 59.891 55.000 16.66 16.66 37.57 4.00
1378 1454 2.824936 CTGGGCATATGGTTCAACACAA 59.175 45.455 4.56 0.00 0.00 3.33
1504 1588 1.134098 ACCGGTCTGCCAAATCCATAG 60.134 52.381 0.00 0.00 34.09 2.23
1590 1677 3.013219 TCTCATCCTGACAGACTCTTCG 58.987 50.000 3.32 0.00 0.00 3.79
1591 1678 2.095461 TCATCCTGACAGACTCTTCGG 58.905 52.381 3.32 0.00 0.00 4.30
1600 1687 2.490115 ACAGACTCTTCGGACTCATCAC 59.510 50.000 0.00 0.00 0.00 3.06
1761 1852 1.377333 GCAGTTAGACCCCAGTGGC 60.377 63.158 2.61 0.00 37.83 5.01
1799 1890 4.937620 TCTTGTAGCATTGAACTCATCCAC 59.062 41.667 0.00 0.00 0.00 4.02
2032 2126 3.416156 GGCTTAGAGGATTGGCTAATGG 58.584 50.000 0.00 0.00 0.00 3.16
2076 2170 2.669434 GTGTGATGTCCATGCAATTTGC 59.331 45.455 14.49 14.49 45.29 3.68
2520 2615 4.899502 TGAGAAACAACAGAAGAGGGATC 58.100 43.478 0.00 0.00 0.00 3.36
2577 2672 4.024218 GCTCTAGGCTTATTTGCACTCATG 60.024 45.833 0.00 0.00 38.06 3.07
2637 2732 7.014038 AGCTCTGGTCAAATAATCAATGAATCC 59.986 37.037 0.00 0.00 0.00 3.01
2760 2856 1.907240 AGGGGCTTATAAAGGGCTCA 58.093 50.000 1.69 0.00 0.00 4.26
3308 3410 7.603180 ACTCATGTGCTTTATATCCTAGTGA 57.397 36.000 0.00 0.00 0.00 3.41
3691 3802 7.862512 ACTACTAGAAGACTGTAACGCTTAT 57.137 36.000 0.00 0.00 0.00 1.73
3692 3803 8.954950 ACTACTAGAAGACTGTAACGCTTATA 57.045 34.615 0.00 0.00 0.00 0.98
3693 3804 8.825745 ACTACTAGAAGACTGTAACGCTTATAC 58.174 37.037 0.00 0.00 0.00 1.47
3695 3806 7.918643 ACTAGAAGACTGTAACGCTTATACTC 58.081 38.462 0.00 0.00 0.00 2.59
3696 3807 6.134040 AGAAGACTGTAACGCTTATACTCC 57.866 41.667 0.00 0.00 0.00 3.85
3697 3808 4.915158 AGACTGTAACGCTTATACTCCC 57.085 45.455 0.00 0.00 0.00 4.30
3698 3809 4.534797 AGACTGTAACGCTTATACTCCCT 58.465 43.478 0.00 0.00 0.00 4.20
3699 3810 4.579753 AGACTGTAACGCTTATACTCCCTC 59.420 45.833 0.00 0.00 0.00 4.30
3700 3811 3.635836 ACTGTAACGCTTATACTCCCTCC 59.364 47.826 0.00 0.00 0.00 4.30
3701 3812 3.890147 CTGTAACGCTTATACTCCCTCCT 59.110 47.826 0.00 0.00 0.00 3.69
3702 3813 4.284178 TGTAACGCTTATACTCCCTCCTT 58.716 43.478 0.00 0.00 0.00 3.36
3703 3814 4.340381 TGTAACGCTTATACTCCCTCCTTC 59.660 45.833 0.00 0.00 0.00 3.46
3704 3815 3.028094 ACGCTTATACTCCCTCCTTCA 57.972 47.619 0.00 0.00 0.00 3.02
3705 3816 2.959707 ACGCTTATACTCCCTCCTTCAG 59.040 50.000 0.00 0.00 0.00 3.02
3706 3817 2.297597 CGCTTATACTCCCTCCTTCAGG 59.702 54.545 0.00 0.00 43.01 3.86
3720 3831 4.579869 TCCTTCAGGAAATACTTGTCAGC 58.420 43.478 0.00 0.00 42.18 4.26
3721 3832 3.372206 CCTTCAGGAAATACTTGTCAGCG 59.628 47.826 0.00 0.00 37.39 5.18
3722 3833 3.953712 TCAGGAAATACTTGTCAGCGA 57.046 42.857 0.00 0.00 0.00 4.93
3723 3834 4.265904 TCAGGAAATACTTGTCAGCGAA 57.734 40.909 0.00 0.00 0.00 4.70
3724 3835 4.637276 TCAGGAAATACTTGTCAGCGAAA 58.363 39.130 0.00 0.00 0.00 3.46
3725 3836 5.245531 TCAGGAAATACTTGTCAGCGAAAT 58.754 37.500 0.00 0.00 0.00 2.17
3726 3837 5.122239 TCAGGAAATACTTGTCAGCGAAATG 59.878 40.000 0.00 0.00 0.00 2.32
3727 3838 4.396166 AGGAAATACTTGTCAGCGAAATGG 59.604 41.667 0.00 0.00 0.00 3.16
3728 3839 4.394920 GGAAATACTTGTCAGCGAAATGGA 59.605 41.667 0.00 0.00 0.00 3.41
3729 3840 5.066505 GGAAATACTTGTCAGCGAAATGGAT 59.933 40.000 0.00 0.00 0.00 3.41
3730 3841 5.490139 AATACTTGTCAGCGAAATGGATG 57.510 39.130 0.00 0.00 0.00 3.51
3731 3842 2.783135 ACTTGTCAGCGAAATGGATGT 58.217 42.857 0.00 0.00 0.00 3.06
3732 3843 3.937814 ACTTGTCAGCGAAATGGATGTA 58.062 40.909 0.00 0.00 0.00 2.29
3733 3844 4.517285 ACTTGTCAGCGAAATGGATGTAT 58.483 39.130 0.00 0.00 0.00 2.29
3734 3845 4.572389 ACTTGTCAGCGAAATGGATGTATC 59.428 41.667 0.00 0.00 0.00 2.24
3735 3846 4.406648 TGTCAGCGAAATGGATGTATCT 57.593 40.909 0.00 0.00 0.00 1.98
3736 3847 5.529581 TGTCAGCGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 0.00 1.98
3737 3848 5.532557 TGTCAGCGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 0.00 2.43
3738 3849 5.301805 TGTCAGCGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 0.00 2.43
3739 3850 5.631512 GTCAGCGAAATGGATGTATCTAGAC 59.368 44.000 0.00 0.00 0.00 2.59
3740 3851 4.618912 CAGCGAAATGGATGTATCTAGACG 59.381 45.833 0.00 0.00 0.00 4.18
3741 3852 4.278669 AGCGAAATGGATGTATCTAGACGT 59.721 41.667 0.00 0.00 0.00 4.34
3742 3853 5.472478 AGCGAAATGGATGTATCTAGACGTA 59.528 40.000 0.00 0.00 0.00 3.57
3743 3854 6.151312 AGCGAAATGGATGTATCTAGACGTAT 59.849 38.462 0.00 0.00 0.00 3.06
3744 3855 6.807230 GCGAAATGGATGTATCTAGACGTATT 59.193 38.462 0.00 0.00 0.00 1.89
3745 3856 7.328737 GCGAAATGGATGTATCTAGACGTATTT 59.671 37.037 0.00 0.00 0.00 1.40
3746 3857 9.193133 CGAAATGGATGTATCTAGACGTATTTT 57.807 33.333 0.00 0.00 0.00 1.82
3762 3873 9.209175 AGACGTATTTTAATTCTAGATGCATCC 57.791 33.333 23.06 5.58 0.00 3.51
3763 3874 8.902540 ACGTATTTTAATTCTAGATGCATCCA 57.097 30.769 23.06 9.05 0.00 3.41
3764 3875 9.507329 ACGTATTTTAATTCTAGATGCATCCAT 57.493 29.630 23.06 8.39 0.00 3.41
3773 3884 8.945195 ATTCTAGATGCATCCATTTTTATCCA 57.055 30.769 23.06 0.00 0.00 3.41
3774 3885 8.945195 TTCTAGATGCATCCATTTTTATCCAT 57.055 30.769 23.06 2.35 0.00 3.41
3775 3886 8.945195 TCTAGATGCATCCATTTTTATCCATT 57.055 30.769 23.06 1.91 0.00 3.16
3776 3887 9.370930 TCTAGATGCATCCATTTTTATCCATTT 57.629 29.630 23.06 1.25 0.00 2.32
3779 3890 9.938280 AGATGCATCCATTTTTATCCATTTATG 57.062 29.630 23.06 0.00 0.00 1.90
3780 3891 9.715121 GATGCATCCATTTTTATCCATTTATGT 57.285 29.630 16.23 0.00 0.00 2.29
3781 3892 8.890124 TGCATCCATTTTTATCCATTTATGTG 57.110 30.769 0.00 0.00 0.00 3.21
3782 3893 8.702819 TGCATCCATTTTTATCCATTTATGTGA 58.297 29.630 0.00 0.00 0.00 3.58
3783 3894 8.981647 GCATCCATTTTTATCCATTTATGTGAC 58.018 33.333 0.00 0.00 0.00 3.67
3787 3898 9.874205 CCATTTTTATCCATTTATGTGACAAGT 57.126 29.630 0.00 0.00 0.00 3.16
3795 3906 7.757526 TCCATTTATGTGACAAGTATTTTCGG 58.242 34.615 0.00 0.00 0.00 4.30
3796 3907 7.608376 TCCATTTATGTGACAAGTATTTTCGGA 59.392 33.333 0.00 0.00 0.00 4.55
3797 3908 7.696453 CCATTTATGTGACAAGTATTTTCGGAC 59.304 37.037 0.00 0.00 0.00 4.79
3798 3909 4.921470 ATGTGACAAGTATTTTCGGACG 57.079 40.909 0.00 0.00 0.00 4.79
3799 3910 3.061322 TGTGACAAGTATTTTCGGACGG 58.939 45.455 0.00 0.00 0.00 4.79
3800 3911 3.243805 TGTGACAAGTATTTTCGGACGGA 60.244 43.478 0.00 0.00 0.00 4.69
3801 3912 3.367025 GTGACAAGTATTTTCGGACGGAG 59.633 47.826 0.00 0.00 0.00 4.63
3802 3913 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
3803 3914 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
3804 3915 0.828677 AGTATTTTCGGACGGAGGGG 59.171 55.000 0.00 0.00 0.00 4.79
3805 3916 0.179065 GTATTTTCGGACGGAGGGGG 60.179 60.000 0.00 0.00 0.00 5.40
3881 4004 5.957771 ATCATCGGTATAATATGTGGCCT 57.042 39.130 3.32 0.00 0.00 5.19
3973 4141 3.944015 CCAACTTGGAAGCTCATTCTAGG 59.056 47.826 0.92 0.00 40.96 3.02
4007 4175 5.578727 CAGTAAGAGCTTAGCCTTGTTACAG 59.421 44.000 14.94 5.32 0.00 2.74
4010 4178 2.933260 GAGCTTAGCCTTGTTACAGCTC 59.067 50.000 0.00 3.86 44.69 4.09
4045 4213 1.167851 CATAATGGTAGCCATGGCGG 58.832 55.000 30.50 9.17 44.40 6.13
4065 4233 2.359726 TGCTGCGGCAATGCTACA 60.360 55.556 20.23 2.76 46.36 2.74
4085 4253 1.512734 CCAAAACAGCGCGCTCATC 60.513 57.895 34.28 0.22 0.00 2.92
4089 4257 1.959899 AAACAGCGCGCTCATCTTCG 61.960 55.000 34.28 20.88 0.00 3.79
4095 4263 2.296480 GCGCTCATCTTCGCCTACG 61.296 63.158 0.00 0.00 45.01 3.51
4096 4264 1.658717 CGCTCATCTTCGCCTACGG 60.659 63.158 0.00 0.00 40.63 4.02
4101 4269 1.134907 TCATCTTCGCCTACGGTTTCC 60.135 52.381 0.00 0.00 40.63 3.13
4117 4285 3.151554 GTTTCCCATAAAACTCACCGGT 58.848 45.455 0.00 0.00 36.44 5.28
4138 4306 3.824810 GGCAGCAGGCTCTGAATC 58.175 61.111 15.26 3.66 44.01 2.52
4139 4307 1.224039 GGCAGCAGGCTCTGAATCT 59.776 57.895 15.26 0.00 44.01 2.40
4140 4308 0.814812 GGCAGCAGGCTCTGAATCTC 60.815 60.000 15.26 1.03 44.01 2.75
4141 4309 0.178533 GCAGCAGGCTCTGAATCTCT 59.821 55.000 15.26 0.00 40.25 3.10
4142 4310 1.942677 CAGCAGGCTCTGAATCTCTG 58.057 55.000 6.40 0.00 36.19 3.35
4143 4311 1.481363 CAGCAGGCTCTGAATCTCTGA 59.519 52.381 6.40 0.00 36.19 3.27
4152 4320 4.282957 GCTCTGAATCTCTGATATGGTCCA 59.717 45.833 0.00 0.00 0.00 4.02
4162 4330 2.158430 TGATATGGTCCAAGGCATGCAT 60.158 45.455 21.36 10.32 0.00 3.96
4184 4352 0.603975 GGTGACCCTTGCTCAGTGAC 60.604 60.000 0.00 0.00 0.00 3.67
4224 4392 1.346068 GCCTGGCTGAATAGGAGGTAG 59.654 57.143 12.43 0.00 36.11 3.18
4226 4394 2.896685 CCTGGCTGAATAGGAGGTAGAG 59.103 54.545 0.00 0.00 36.11 2.43
4240 4408 1.227883 TAGAGCCGTAGAGGAGCCG 60.228 63.158 0.00 0.00 45.00 5.52
4248 4416 1.739035 CGTAGAGGAGCCGCAATTTCA 60.739 52.381 0.00 0.00 0.00 2.69
4250 4418 1.028868 AGAGGAGCCGCAATTTCAGC 61.029 55.000 0.00 0.00 0.00 4.26
4268 4436 2.186903 CGGGGTTGATGGAGACGG 59.813 66.667 0.00 0.00 0.00 4.79
4271 4439 2.511600 GGTTGATGGAGACGGCGG 60.512 66.667 13.24 0.00 0.00 6.13
4278 4446 4.593864 GGAGACGGCGGCCATCTC 62.594 72.222 31.35 31.35 38.53 2.75
4287 4455 3.917760 GGCCATCTCGACCTCCGG 61.918 72.222 0.00 0.00 39.14 5.14
4288 4456 3.148279 GCCATCTCGACCTCCGGT 61.148 66.667 0.00 0.00 39.44 5.28
4289 4457 2.808315 CCATCTCGACCTCCGGTG 59.192 66.667 0.00 0.00 35.25 4.94
4290 4458 2.105128 CATCTCGACCTCCGGTGC 59.895 66.667 0.00 0.00 35.25 5.01
4309 4477 2.530177 GCGGGAAGCTGAAAAATAAGC 58.470 47.619 0.00 0.00 44.04 3.09
4328 4496 1.508088 GAGGGAAAATGGCGCACTG 59.492 57.895 10.83 0.00 0.00 3.66
4333 4501 0.725784 GAAAATGGCGCACTGTGACG 60.726 55.000 12.86 15.09 0.00 4.35
4344 4512 2.034507 GCACTGTGACGCGAATAGAATC 60.035 50.000 15.93 0.00 0.00 2.52
4358 4526 0.681564 AGAATCGGACGAGGCTCACT 60.682 55.000 15.95 0.00 0.00 3.41
4371 4539 1.817099 CTCACTGGCGAGGGCAATC 60.817 63.158 0.00 0.00 42.47 2.67
4414 4582 2.354401 CCAAGCTCGCCTCCAGAGA 61.354 63.158 0.00 0.00 37.93 3.10
4425 4593 0.388659 CTCCAGAGATCGAAGGGCTG 59.611 60.000 0.00 0.00 0.00 4.85
4472 4640 2.745515 AGTGGTAGAAGGAAACTCGC 57.254 50.000 0.00 0.00 42.68 5.03
4482 4650 0.243095 GGAAACTCGCGTGTAGGTCT 59.757 55.000 14.90 0.00 0.00 3.85
4488 4656 2.183555 GCGTGTAGGTCTTCCGGG 59.816 66.667 0.00 0.00 39.05 5.73
4491 4659 1.079336 GTGTAGGTCTTCCGGGCAC 60.079 63.158 0.00 0.00 39.05 5.01
4503 4671 2.978824 GGGCACGGCAAGTAGAGA 59.021 61.111 0.00 0.00 0.00 3.10
4507 4675 1.337823 GGCACGGCAAGTAGAGAAGAA 60.338 52.381 0.00 0.00 0.00 2.52
4508 4676 2.622436 GCACGGCAAGTAGAGAAGAAT 58.378 47.619 0.00 0.00 0.00 2.40
4509 4677 2.605366 GCACGGCAAGTAGAGAAGAATC 59.395 50.000 0.00 0.00 0.00 2.52
4510 4678 3.849911 CACGGCAAGTAGAGAAGAATCA 58.150 45.455 0.00 0.00 0.00 2.57
4511 4679 3.862267 CACGGCAAGTAGAGAAGAATCAG 59.138 47.826 0.00 0.00 0.00 2.90
4512 4680 3.118956 ACGGCAAGTAGAGAAGAATCAGG 60.119 47.826 0.00 0.00 0.00 3.86
4513 4681 3.131223 CGGCAAGTAGAGAAGAATCAGGA 59.869 47.826 0.00 0.00 0.00 3.86
4514 4682 4.692228 GGCAAGTAGAGAAGAATCAGGAG 58.308 47.826 0.00 0.00 0.00 3.69
4515 4683 4.404073 GGCAAGTAGAGAAGAATCAGGAGA 59.596 45.833 0.00 0.00 0.00 3.71
4516 4684 5.105146 GGCAAGTAGAGAAGAATCAGGAGAA 60.105 44.000 0.00 0.00 0.00 2.87
4517 4685 6.042143 GCAAGTAGAGAAGAATCAGGAGAAG 58.958 44.000 0.00 0.00 0.00 2.85
4518 4686 6.572519 CAAGTAGAGAAGAATCAGGAGAAGG 58.427 44.000 0.00 0.00 0.00 3.46
4519 4687 6.086011 AGTAGAGAAGAATCAGGAGAAGGA 57.914 41.667 0.00 0.00 0.00 3.36
4520 4688 6.129179 AGTAGAGAAGAATCAGGAGAAGGAG 58.871 44.000 0.00 0.00 0.00 3.69
4521 4689 3.706086 AGAGAAGAATCAGGAGAAGGAGC 59.294 47.826 0.00 0.00 0.00 4.70
4522 4690 3.706086 GAGAAGAATCAGGAGAAGGAGCT 59.294 47.826 0.00 0.00 0.00 4.09
4523 4691 3.706086 AGAAGAATCAGGAGAAGGAGCTC 59.294 47.826 4.71 4.71 0.00 4.09
4524 4692 3.113191 AGAATCAGGAGAAGGAGCTCA 57.887 47.619 17.19 0.00 36.62 4.26
4525 4693 2.765699 AGAATCAGGAGAAGGAGCTCAC 59.234 50.000 17.19 5.01 36.62 3.51
4526 4694 2.244486 ATCAGGAGAAGGAGCTCACA 57.756 50.000 17.19 0.00 36.62 3.58
4527 4695 1.261480 TCAGGAGAAGGAGCTCACAC 58.739 55.000 17.19 5.63 36.62 3.82
4528 4696 0.248843 CAGGAGAAGGAGCTCACACC 59.751 60.000 17.19 13.48 36.62 4.16
4529 4697 0.178921 AGGAGAAGGAGCTCACACCA 60.179 55.000 17.19 0.00 36.62 4.17
4530 4698 0.908198 GGAGAAGGAGCTCACACCAT 59.092 55.000 17.19 0.00 36.62 3.55
4531 4699 1.134551 GGAGAAGGAGCTCACACCATC 60.135 57.143 17.19 0.81 36.62 3.51
4532 4700 1.552337 GAGAAGGAGCTCACACCATCA 59.448 52.381 17.19 0.00 35.01 3.07
4533 4701 1.980765 AGAAGGAGCTCACACCATCAA 59.019 47.619 17.19 0.00 27.93 2.57
4534 4702 2.027377 AGAAGGAGCTCACACCATCAAG 60.027 50.000 17.19 0.00 27.93 3.02
4535 4703 0.035630 AGGAGCTCACACCATCAAGC 60.036 55.000 17.19 0.00 34.95 4.01
4536 4704 1.028868 GGAGCTCACACCATCAAGCC 61.029 60.000 17.19 0.00 35.32 4.35
4537 4705 0.035630 GAGCTCACACCATCAAGCCT 60.036 55.000 9.40 0.00 35.32 4.58
4538 4706 0.322277 AGCTCACACCATCAAGCCTG 60.322 55.000 0.00 0.00 35.32 4.85
4539 4707 0.607489 GCTCACACCATCAAGCCTGT 60.607 55.000 0.00 0.00 0.00 4.00
4540 4708 1.901591 CTCACACCATCAAGCCTGTT 58.098 50.000 0.00 0.00 0.00 3.16
4541 4709 2.233271 CTCACACCATCAAGCCTGTTT 58.767 47.619 0.00 0.00 0.00 2.83
4542 4710 2.624838 CTCACACCATCAAGCCTGTTTT 59.375 45.455 0.00 0.00 0.00 2.43
4543 4711 2.622942 TCACACCATCAAGCCTGTTTTC 59.377 45.455 0.00 0.00 0.00 2.29
4544 4712 2.361757 CACACCATCAAGCCTGTTTTCA 59.638 45.455 0.00 0.00 0.00 2.69
4545 4713 3.030291 ACACCATCAAGCCTGTTTTCAA 58.970 40.909 0.00 0.00 0.00 2.69
4546 4714 3.642848 ACACCATCAAGCCTGTTTTCAAT 59.357 39.130 0.00 0.00 0.00 2.57
4547 4715 3.991773 CACCATCAAGCCTGTTTTCAATG 59.008 43.478 0.00 0.00 0.00 2.82
4548 4716 2.997986 CCATCAAGCCTGTTTTCAATGC 59.002 45.455 0.00 0.00 0.00 3.56
4549 4717 3.306502 CCATCAAGCCTGTTTTCAATGCT 60.307 43.478 0.00 0.00 38.88 3.79
4550 4718 4.312443 CATCAAGCCTGTTTTCAATGCTT 58.688 39.130 0.00 0.00 43.77 3.91
4551 4719 3.981211 TCAAGCCTGTTTTCAATGCTTC 58.019 40.909 0.00 0.00 42.26 3.86
4552 4720 3.384146 TCAAGCCTGTTTTCAATGCTTCA 59.616 39.130 0.00 0.00 42.26 3.02
4553 4721 3.375782 AGCCTGTTTTCAATGCTTCAC 57.624 42.857 0.00 0.00 35.40 3.18
4554 4722 2.961062 AGCCTGTTTTCAATGCTTCACT 59.039 40.909 0.00 0.00 35.40 3.41
4555 4723 3.005155 AGCCTGTTTTCAATGCTTCACTC 59.995 43.478 0.00 0.00 35.40 3.51
4556 4724 3.243501 GCCTGTTTTCAATGCTTCACTCA 60.244 43.478 0.00 0.00 0.00 3.41
4557 4725 4.543692 CCTGTTTTCAATGCTTCACTCAG 58.456 43.478 0.00 0.00 0.00 3.35
4558 4726 4.543692 CTGTTTTCAATGCTTCACTCAGG 58.456 43.478 0.00 0.00 0.00 3.86
4559 4727 3.953612 TGTTTTCAATGCTTCACTCAGGT 59.046 39.130 0.00 0.00 0.00 4.00
4560 4728 5.129634 TGTTTTCAATGCTTCACTCAGGTA 58.870 37.500 0.00 0.00 0.00 3.08
4561 4729 5.769662 TGTTTTCAATGCTTCACTCAGGTAT 59.230 36.000 0.00 0.00 0.00 2.73
4562 4730 6.072508 TGTTTTCAATGCTTCACTCAGGTATC 60.073 38.462 0.00 0.00 0.00 2.24
4563 4731 5.426689 TTCAATGCTTCACTCAGGTATCT 57.573 39.130 0.00 0.00 0.00 1.98
4564 4732 5.426689 TCAATGCTTCACTCAGGTATCTT 57.573 39.130 0.00 0.00 0.00 2.40
4565 4733 5.809001 TCAATGCTTCACTCAGGTATCTTT 58.191 37.500 0.00 0.00 0.00 2.52
4566 4734 5.877012 TCAATGCTTCACTCAGGTATCTTTC 59.123 40.000 0.00 0.00 0.00 2.62
4567 4735 4.890158 TGCTTCACTCAGGTATCTTTCA 57.110 40.909 0.00 0.00 0.00 2.69
4568 4736 4.825422 TGCTTCACTCAGGTATCTTTCAG 58.175 43.478 0.00 0.00 0.00 3.02
4569 4737 4.284490 TGCTTCACTCAGGTATCTTTCAGT 59.716 41.667 0.00 0.00 0.00 3.41
4570 4738 5.221722 TGCTTCACTCAGGTATCTTTCAGTT 60.222 40.000 0.00 0.00 0.00 3.16
4571 4739 6.014584 TGCTTCACTCAGGTATCTTTCAGTTA 60.015 38.462 0.00 0.00 0.00 2.24
4572 4740 7.044798 GCTTCACTCAGGTATCTTTCAGTTAT 58.955 38.462 0.00 0.00 0.00 1.89
4573 4741 7.223777 GCTTCACTCAGGTATCTTTCAGTTATC 59.776 40.741 0.00 0.00 0.00 1.75
4574 4742 7.962995 TCACTCAGGTATCTTTCAGTTATCT 57.037 36.000 0.00 0.00 0.00 1.98
4575 4743 8.001881 TCACTCAGGTATCTTTCAGTTATCTC 57.998 38.462 0.00 0.00 0.00 2.75
4576 4744 7.615757 TCACTCAGGTATCTTTCAGTTATCTCA 59.384 37.037 0.00 0.00 0.00 3.27
4577 4745 7.920151 CACTCAGGTATCTTTCAGTTATCTCAG 59.080 40.741 0.00 0.00 0.00 3.35
4578 4746 7.836685 ACTCAGGTATCTTTCAGTTATCTCAGA 59.163 37.037 0.00 0.00 0.00 3.27
4579 4747 8.001881 TCAGGTATCTTTCAGTTATCTCAGAC 57.998 38.462 0.00 0.00 0.00 3.51
4580 4748 7.836685 TCAGGTATCTTTCAGTTATCTCAGACT 59.163 37.037 0.00 0.00 0.00 3.24
4581 4749 8.134895 CAGGTATCTTTCAGTTATCTCAGACTC 58.865 40.741 0.00 0.00 0.00 3.36
4582 4750 7.286775 AGGTATCTTTCAGTTATCTCAGACTCC 59.713 40.741 0.00 0.00 0.00 3.85
4583 4751 7.068839 GGTATCTTTCAGTTATCTCAGACTCCA 59.931 40.741 0.00 0.00 0.00 3.86
4584 4752 6.918067 TCTTTCAGTTATCTCAGACTCCAA 57.082 37.500 0.00 0.00 0.00 3.53
4585 4753 6.929625 TCTTTCAGTTATCTCAGACTCCAAG 58.070 40.000 0.00 0.00 0.00 3.61
4586 4754 5.667539 TTCAGTTATCTCAGACTCCAAGG 57.332 43.478 0.00 0.00 0.00 3.61
4587 4755 4.678256 TCAGTTATCTCAGACTCCAAGGT 58.322 43.478 0.00 0.00 0.00 3.50
4588 4756 5.087323 TCAGTTATCTCAGACTCCAAGGTT 58.913 41.667 0.00 0.00 0.00 3.50
4589 4757 5.544176 TCAGTTATCTCAGACTCCAAGGTTT 59.456 40.000 0.00 0.00 0.00 3.27
4590 4758 5.872070 CAGTTATCTCAGACTCCAAGGTTTC 59.128 44.000 0.00 0.00 0.00 2.78
4591 4759 5.544176 AGTTATCTCAGACTCCAAGGTTTCA 59.456 40.000 0.00 0.00 0.00 2.69
4592 4760 4.550076 ATCTCAGACTCCAAGGTTTCAG 57.450 45.455 0.00 0.00 0.00 3.02
4593 4761 3.576861 TCTCAGACTCCAAGGTTTCAGA 58.423 45.455 0.00 0.00 0.00 3.27
4594 4762 3.967326 TCTCAGACTCCAAGGTTTCAGAA 59.033 43.478 0.00 0.00 0.00 3.02
4595 4763 4.408921 TCTCAGACTCCAAGGTTTCAGAAA 59.591 41.667 0.00 0.00 0.00 2.52
4596 4764 4.451900 TCAGACTCCAAGGTTTCAGAAAC 58.548 43.478 16.63 16.63 40.65 2.78
4597 4765 3.248602 CAGACTCCAAGGTTTCAGAAACG 59.751 47.826 17.98 7.24 42.29 3.60
4598 4766 3.118371 AGACTCCAAGGTTTCAGAAACGT 60.118 43.478 17.98 16.14 42.29 3.99
4599 4767 3.617284 ACTCCAAGGTTTCAGAAACGTT 58.383 40.909 22.64 22.64 46.74 3.99
4604 4772 4.632538 AAGGTTTCAGAAACGTTGGAAG 57.367 40.909 25.94 0.00 44.83 3.46
4605 4773 2.949644 AGGTTTCAGAAACGTTGGAAGG 59.050 45.455 17.98 0.00 42.29 3.46
4606 4774 2.946990 GGTTTCAGAAACGTTGGAAGGA 59.053 45.455 17.98 0.00 42.29 3.36
4607 4775 3.003378 GGTTTCAGAAACGTTGGAAGGAG 59.997 47.826 17.98 0.00 42.29 3.69
4608 4776 3.830744 TTCAGAAACGTTGGAAGGAGA 57.169 42.857 0.00 0.00 0.00 3.71
4609 4777 4.351874 TTCAGAAACGTTGGAAGGAGAT 57.648 40.909 0.00 0.00 0.00 2.75
4610 4778 3.664107 TCAGAAACGTTGGAAGGAGATG 58.336 45.455 0.00 0.00 0.00 2.90
4611 4779 2.744202 CAGAAACGTTGGAAGGAGATGG 59.256 50.000 0.00 0.00 0.00 3.51
4612 4780 2.637872 AGAAACGTTGGAAGGAGATGGA 59.362 45.455 0.00 0.00 0.00 3.41
4613 4781 2.770164 AACGTTGGAAGGAGATGGAG 57.230 50.000 0.00 0.00 0.00 3.86
4614 4782 0.250513 ACGTTGGAAGGAGATGGAGC 59.749 55.000 0.00 0.00 0.00 4.70
4615 4783 0.807667 CGTTGGAAGGAGATGGAGCG 60.808 60.000 0.00 0.00 0.00 5.03
4616 4784 1.092345 GTTGGAAGGAGATGGAGCGC 61.092 60.000 0.00 0.00 0.00 5.92
4617 4785 2.279784 GGAAGGAGATGGAGCGCG 60.280 66.667 0.00 0.00 0.00 6.86
4618 4786 2.786495 GGAAGGAGATGGAGCGCGA 61.786 63.158 12.10 0.00 0.00 5.87
4619 4787 1.299773 GAAGGAGATGGAGCGCGAG 60.300 63.158 12.10 0.00 0.00 5.03
4620 4788 1.729470 GAAGGAGATGGAGCGCGAGA 61.729 60.000 12.10 0.00 0.00 4.04
4621 4789 2.010582 AAGGAGATGGAGCGCGAGAC 62.011 60.000 12.10 0.00 0.00 3.36
4622 4790 2.485795 GGAGATGGAGCGCGAGACT 61.486 63.158 12.10 0.00 0.00 3.24
4623 4791 1.008995 GAGATGGAGCGCGAGACTC 60.009 63.158 12.10 7.04 34.80 3.36
4624 4792 2.352915 GATGGAGCGCGAGACTCG 60.353 66.667 20.56 20.56 43.89 4.18
4625 4793 3.114647 GATGGAGCGCGAGACTCGT 62.115 63.158 24.80 6.45 42.81 4.18
4632 4800 4.443784 GCGAGACTCGTGAGACAC 57.556 61.111 24.80 3.81 42.81 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 4.654091 AAATGATGAATTGGCGTTAGGG 57.346 40.909 0.00 0.00 0.00 3.53
19 20 6.542574 TCAACAACAAAATGATGAATTGGC 57.457 33.333 0.00 0.00 30.33 4.52
29 30 8.472683 TGAAACCTAACTTCAACAACAAAATG 57.527 30.769 0.00 0.00 29.93 2.32
72 73 7.386025 CGTGGACAGATGAATACATGTTATCAT 59.614 37.037 20.00 20.00 36.82 2.45
78 79 3.197766 ACCGTGGACAGATGAATACATGT 59.802 43.478 2.69 2.69 36.82 3.21
97 98 1.070175 CAACGCTCAACCTTGTAACCG 60.070 52.381 0.00 0.00 0.00 4.44
111 112 2.244117 ATCCTCGATGCACCAACGCT 62.244 55.000 0.00 0.00 30.00 5.07
112 113 1.815421 ATCCTCGATGCACCAACGC 60.815 57.895 0.00 0.00 30.00 4.84
127 128 2.224523 TGGCCGATCAACCTTATCATCC 60.225 50.000 0.00 0.00 0.00 3.51
156 157 1.936547 CAAGAATCCGAACTAGCTGCC 59.063 52.381 0.00 0.00 0.00 4.85
164 165 4.254492 ACTAGCCTTTCAAGAATCCGAAC 58.746 43.478 0.00 0.00 0.00 3.95
179 180 3.539604 GCATTGTGATCTCAACTAGCCT 58.460 45.455 12.15 0.00 0.00 4.58
199 200 1.751927 CAGTCTTGGCATCAGGGGC 60.752 63.158 0.00 0.00 0.00 5.80
200 201 1.751927 GCAGTCTTGGCATCAGGGG 60.752 63.158 0.00 0.00 0.00 4.79
204 205 0.401356 TTGGAGCAGTCTTGGCATCA 59.599 50.000 0.00 0.00 0.00 3.07
205 206 1.093159 CTTGGAGCAGTCTTGGCATC 58.907 55.000 0.00 0.00 0.00 3.91
207 208 1.601759 GCTTGGAGCAGTCTTGGCA 60.602 57.895 0.00 0.00 41.89 4.92
232 234 2.574212 GTTGAATGCGCGCTTCCG 60.574 61.111 33.29 0.00 37.57 4.30
268 270 5.723295 ACATGGTATGCAACTCATTTTTCC 58.277 37.500 0.00 0.00 36.63 3.13
270 272 7.466746 AGTACATGGTATGCAACTCATTTTT 57.533 32.000 0.00 0.00 36.63 1.94
275 277 4.225042 AGGAAGTACATGGTATGCAACTCA 59.775 41.667 0.00 0.00 31.05 3.41
286 288 1.831736 AGGAACGGAGGAAGTACATGG 59.168 52.381 0.00 0.00 0.00 3.66
288 290 5.952347 ATTTAGGAACGGAGGAAGTACAT 57.048 39.130 0.00 0.00 0.00 2.29
289 291 8.537728 TTATATTTAGGAACGGAGGAAGTACA 57.462 34.615 0.00 0.00 0.00 2.90
290 292 8.637099 ACTTATATTTAGGAACGGAGGAAGTAC 58.363 37.037 0.00 0.00 0.00 2.73
291 293 8.773033 ACTTATATTTAGGAACGGAGGAAGTA 57.227 34.615 0.00 0.00 0.00 2.24
292 294 7.564292 AGACTTATATTTAGGAACGGAGGAAGT 59.436 37.037 0.00 0.00 0.00 3.01
293 295 7.953752 AGACTTATATTTAGGAACGGAGGAAG 58.046 38.462 0.00 0.00 0.00 3.46
294 296 7.909485 AGACTTATATTTAGGAACGGAGGAA 57.091 36.000 0.00 0.00 0.00 3.36
295 297 7.909485 AAGACTTATATTTAGGAACGGAGGA 57.091 36.000 0.00 0.00 0.00 3.71
296 298 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
313 315 9.750125 GTCCATTTGAAATGTCTAAAAAGACTT 57.250 29.630 15.93 0.00 39.41 3.01
314 316 9.136323 AGTCCATTTGAAATGTCTAAAAAGACT 57.864 29.630 15.93 14.21 39.41 3.24
319 321 9.959749 GTTGTAGTCCATTTGAAATGTCTAAAA 57.040 29.630 15.93 14.59 0.00 1.52
320 322 9.126151 TGTTGTAGTCCATTTGAAATGTCTAAA 57.874 29.630 15.93 10.39 0.00 1.85
321 323 8.684386 TGTTGTAGTCCATTTGAAATGTCTAA 57.316 30.769 15.93 4.89 0.00 2.10
322 324 8.862325 ATGTTGTAGTCCATTTGAAATGTCTA 57.138 30.769 15.93 13.97 0.00 2.59
323 325 7.765695 ATGTTGTAGTCCATTTGAAATGTCT 57.234 32.000 15.93 14.81 0.00 3.41
324 326 7.692291 CGTATGTTGTAGTCCATTTGAAATGTC 59.308 37.037 15.93 9.10 0.00 3.06
325 327 7.361713 CCGTATGTTGTAGTCCATTTGAAATGT 60.362 37.037 15.93 1.43 0.00 2.71
326 328 6.966632 CCGTATGTTGTAGTCCATTTGAAATG 59.033 38.462 10.84 10.84 0.00 2.32
327 329 6.882140 TCCGTATGTTGTAGTCCATTTGAAAT 59.118 34.615 0.00 0.00 0.00 2.17
328 330 6.231951 TCCGTATGTTGTAGTCCATTTGAAA 58.768 36.000 0.00 0.00 0.00 2.69
329 331 5.795972 TCCGTATGTTGTAGTCCATTTGAA 58.204 37.500 0.00 0.00 0.00 2.69
330 332 5.408880 TCCGTATGTTGTAGTCCATTTGA 57.591 39.130 0.00 0.00 0.00 2.69
331 333 5.584649 ACATCCGTATGTTGTAGTCCATTTG 59.415 40.000 0.00 0.00 44.07 2.32
332 334 5.741011 ACATCCGTATGTTGTAGTCCATTT 58.259 37.500 0.00 0.00 44.07 2.32
333 335 5.353394 ACATCCGTATGTTGTAGTCCATT 57.647 39.130 0.00 0.00 44.07 3.16
334 336 6.455647 CATACATCCGTATGTTGTAGTCCAT 58.544 40.000 0.00 0.00 46.70 3.41
335 337 5.838529 CATACATCCGTATGTTGTAGTCCA 58.161 41.667 0.00 0.00 46.70 4.02
373 375 9.950496 ACAAGTGAAAATGAGTGAATCTATACT 57.050 29.630 0.00 0.00 0.00 2.12
376 378 9.288576 TCAACAAGTGAAAATGAGTGAATCTAT 57.711 29.630 0.00 0.00 31.51 1.98
377 379 8.675705 TCAACAAGTGAAAATGAGTGAATCTA 57.324 30.769 0.00 0.00 31.51 1.98
378 380 7.572523 TCAACAAGTGAAAATGAGTGAATCT 57.427 32.000 0.00 0.00 31.51 2.40
408 410 9.689501 TCCGTTCCCAAATATAAGTCTTTTTAT 57.310 29.630 0.00 0.00 0.00 1.40
409 411 9.169592 CTCCGTTCCCAAATATAAGTCTTTTTA 57.830 33.333 0.00 0.00 0.00 1.52
410 412 7.122204 CCTCCGTTCCCAAATATAAGTCTTTTT 59.878 37.037 0.00 0.00 0.00 1.94
411 413 6.602009 CCTCCGTTCCCAAATATAAGTCTTTT 59.398 38.462 0.00 0.00 0.00 2.27
412 414 6.120220 CCTCCGTTCCCAAATATAAGTCTTT 58.880 40.000 0.00 0.00 0.00 2.52
413 415 5.397559 CCCTCCGTTCCCAAATATAAGTCTT 60.398 44.000 0.00 0.00 0.00 3.01
414 416 4.102681 CCCTCCGTTCCCAAATATAAGTCT 59.897 45.833 0.00 0.00 0.00 3.24
415 417 4.102054 TCCCTCCGTTCCCAAATATAAGTC 59.898 45.833 0.00 0.00 0.00 3.01
416 418 4.042174 TCCCTCCGTTCCCAAATATAAGT 58.958 43.478 0.00 0.00 0.00 2.24
417 419 4.102681 ACTCCCTCCGTTCCCAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
418 420 4.042174 ACTCCCTCCGTTCCCAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
419 421 3.660959 ACTCCCTCCGTTCCCAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
420 422 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
421 423 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
422 424 1.961133 TACTCCCTCCGTTCCCAAAT 58.039 50.000 0.00 0.00 0.00 2.32
423 425 1.961133 ATACTCCCTCCGTTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
424 426 1.961133 AATACTCCCTCCGTTCCCAA 58.039 50.000 0.00 0.00 0.00 4.12
425 427 1.835531 GAAATACTCCCTCCGTTCCCA 59.164 52.381 0.00 0.00 0.00 4.37
426 428 1.835531 TGAAATACTCCCTCCGTTCCC 59.164 52.381 0.00 0.00 0.00 3.97
427 429 2.500504 ACTGAAATACTCCCTCCGTTCC 59.499 50.000 0.00 0.00 0.00 3.62
428 430 3.889520 ACTGAAATACTCCCTCCGTTC 57.110 47.619 0.00 0.00 0.00 3.95
429 431 4.635699 AAACTGAAATACTCCCTCCGTT 57.364 40.909 0.00 0.00 0.00 4.44
430 432 4.382793 GCTAAACTGAAATACTCCCTCCGT 60.383 45.833 0.00 0.00 0.00 4.69
431 433 4.120589 GCTAAACTGAAATACTCCCTCCG 58.879 47.826 0.00 0.00 0.00 4.63
432 434 5.360649 AGCTAAACTGAAATACTCCCTCC 57.639 43.478 0.00 0.00 0.00 4.30
469 471 7.607991 CCAAGTTGGATCTTAGAAGCTAGAAAA 59.392 37.037 17.60 0.00 40.96 2.29
608 610 1.067974 CACGGCTACCATTATGTCGGA 59.932 52.381 0.00 0.00 0.00 4.55
667 670 1.517361 CGCTGTCATGGGAGTAGCA 59.483 57.895 0.00 0.00 35.32 3.49
678 681 1.807165 GAAGATGAGCGCGCTGTCA 60.807 57.895 41.82 31.21 0.00 3.58
686 689 2.949451 ACAGTAGGTGAAGATGAGCG 57.051 50.000 0.00 0.00 0.00 5.03
687 690 4.262249 GGGATACAGTAGGTGAAGATGAGC 60.262 50.000 0.00 0.00 39.74 4.26
697 700 4.637600 TGGGTTTATGGGATACAGTAGGT 58.362 43.478 0.00 0.00 39.74 3.08
738 745 9.303116 TCCTTTTGTTTGGTGTACATGTATATT 57.697 29.630 9.18 0.00 0.00 1.28
740 747 8.569641 GTTCCTTTTGTTTGGTGTACATGTATA 58.430 33.333 9.18 3.08 0.00 1.47
808 816 6.038997 ACTGTCTAAAGTTCAGATACCCAC 57.961 41.667 10.20 0.00 33.93 4.61
809 817 6.681729 AACTGTCTAAAGTTCAGATACCCA 57.318 37.500 10.20 0.00 35.44 4.51
810 818 7.981102 AAAACTGTCTAAAGTTCAGATACCC 57.019 36.000 10.20 0.00 39.48 3.69
818 826 8.297426 CCCCAGATTAAAAACTGTCTAAAGTTC 58.703 37.037 0.00 0.00 39.48 3.01
835 843 4.303794 AGGTAGTTGCATACCCCAGATTA 58.696 43.478 12.06 0.00 45.48 1.75
836 844 3.123273 AGGTAGTTGCATACCCCAGATT 58.877 45.455 12.06 0.00 45.48 2.40
837 845 2.706190 GAGGTAGTTGCATACCCCAGAT 59.294 50.000 12.06 0.00 45.48 2.90
838 846 2.116238 GAGGTAGTTGCATACCCCAGA 58.884 52.381 12.06 0.00 45.48 3.86
839 847 2.119495 AGAGGTAGTTGCATACCCCAG 58.881 52.381 12.06 0.00 45.48 4.45
840 848 2.263895 AGAGGTAGTTGCATACCCCA 57.736 50.000 12.06 0.00 45.48 4.96
841 849 2.772515 AGAAGAGGTAGTTGCATACCCC 59.227 50.000 12.06 1.73 45.48 4.95
843 851 3.798202 CCAGAAGAGGTAGTTGCATACC 58.202 50.000 8.25 8.25 44.81 2.73
844 852 3.198872 GCCAGAAGAGGTAGTTGCATAC 58.801 50.000 0.00 0.00 0.00 2.39
852 886 1.142748 CGCAGGCCAGAAGAGGTAG 59.857 63.158 5.01 0.00 0.00 3.18
853 887 3.019003 GCGCAGGCCAGAAGAGGTA 62.019 63.158 5.01 0.00 0.00 3.08
873 909 0.683504 GCTCTCCTCCGGTTACCTGA 60.684 60.000 0.00 0.00 0.00 3.86
901 937 5.009811 TGGTTTACCGGTTGAAATCGAAATT 59.990 36.000 15.04 0.00 39.43 1.82
909 945 2.099427 GCAGTTGGTTTACCGGTTGAAA 59.901 45.455 15.04 5.17 39.43 2.69
913 949 0.184211 AGGCAGTTGGTTTACCGGTT 59.816 50.000 15.04 0.00 39.43 4.44
915 951 1.241315 CCAGGCAGTTGGTTTACCGG 61.241 60.000 0.00 0.00 39.43 5.28
1098 1156 4.202295 TGCAGAGGCTGGAAATGTATAGAG 60.202 45.833 0.00 0.00 41.91 2.43
1359 1435 3.181476 GGATTGTGTTGAACCATATGCCC 60.181 47.826 0.00 0.00 0.00 5.36
1378 1454 1.425066 TGCTGAAGTGAACTTGGGGAT 59.575 47.619 0.00 0.00 36.11 3.85
1504 1588 3.202906 TGTTTGCTTGTGTAGACCAGAC 58.797 45.455 0.00 0.00 0.00 3.51
1590 1677 3.742640 GCCATAGAACCTGTGATGAGTCC 60.743 52.174 0.00 0.00 0.00 3.85
1591 1678 3.118629 TGCCATAGAACCTGTGATGAGTC 60.119 47.826 0.00 0.00 0.00 3.36
1600 1687 2.681848 CAAAGCTCTGCCATAGAACCTG 59.318 50.000 0.00 0.00 34.32 4.00
1761 1852 7.624360 TGCTACAAGAAATACCTGGTTAATG 57.376 36.000 3.84 0.00 0.00 1.90
1799 1890 1.292223 CCGGTGGACCAGTAGTGTG 59.708 63.158 0.00 0.00 35.14 3.82
2032 2126 3.010420 GAGCTCTTGGTTGGGTATTGAC 58.990 50.000 6.43 0.00 0.00 3.18
2076 2170 2.034558 AGTGCAAATTGTGAAAGGACCG 59.965 45.455 0.00 0.00 0.00 4.79
2577 2672 5.689383 TTGTCCAAATCAACAGTAAGAGC 57.311 39.130 0.00 0.00 0.00 4.09
2730 2826 6.712547 CCTTTATAAGCCCCTTGAATACAGAG 59.287 42.308 0.00 0.00 0.00 3.35
3204 3306 2.289195 TGGTGTAATGTGAACTCCCGTC 60.289 50.000 0.00 0.00 30.99 4.79
3308 3410 5.338300 GGAAAATAAACATCAGGGTTGCCAT 60.338 40.000 0.00 0.00 0.00 4.40
3679 3790 3.890147 AGGAGGGAGTATAAGCGTTACAG 59.110 47.826 0.00 0.00 0.00 2.74
3691 3802 5.222278 AGTATTTCCTGAAGGAGGGAGTA 57.778 43.478 0.00 0.00 46.36 2.59
3692 3803 4.081695 AGTATTTCCTGAAGGAGGGAGT 57.918 45.455 0.00 0.00 46.36 3.85
3693 3804 4.226168 ACAAGTATTTCCTGAAGGAGGGAG 59.774 45.833 0.00 0.00 46.36 4.30
3695 3806 4.019321 TGACAAGTATTTCCTGAAGGAGGG 60.019 45.833 0.00 0.00 46.36 4.30
3696 3807 5.165961 TGACAAGTATTTCCTGAAGGAGG 57.834 43.478 0.00 0.00 46.36 4.30
3697 3808 4.633565 GCTGACAAGTATTTCCTGAAGGAG 59.366 45.833 0.00 0.00 46.36 3.69
3698 3809 4.579869 GCTGACAAGTATTTCCTGAAGGA 58.420 43.478 0.00 0.00 43.73 3.36
3699 3810 3.372206 CGCTGACAAGTATTTCCTGAAGG 59.628 47.826 0.00 0.00 0.00 3.46
3700 3811 4.245660 TCGCTGACAAGTATTTCCTGAAG 58.754 43.478 0.00 0.00 0.00 3.02
3701 3812 4.265904 TCGCTGACAAGTATTTCCTGAA 57.734 40.909 0.00 0.00 0.00 3.02
3702 3813 3.953712 TCGCTGACAAGTATTTCCTGA 57.046 42.857 0.00 0.00 0.00 3.86
3703 3814 5.327091 CATTTCGCTGACAAGTATTTCCTG 58.673 41.667 0.00 0.00 0.00 3.86
3704 3815 4.396166 CCATTTCGCTGACAAGTATTTCCT 59.604 41.667 0.00 0.00 0.00 3.36
3705 3816 4.394920 TCCATTTCGCTGACAAGTATTTCC 59.605 41.667 0.00 0.00 0.00 3.13
3706 3817 5.545658 TCCATTTCGCTGACAAGTATTTC 57.454 39.130 0.00 0.00 0.00 2.17
3707 3818 5.415701 ACATCCATTTCGCTGACAAGTATTT 59.584 36.000 0.00 0.00 0.00 1.40
3708 3819 4.943705 ACATCCATTTCGCTGACAAGTATT 59.056 37.500 0.00 0.00 0.00 1.89
3709 3820 4.517285 ACATCCATTTCGCTGACAAGTAT 58.483 39.130 0.00 0.00 0.00 2.12
3710 3821 3.937814 ACATCCATTTCGCTGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
3711 3822 2.783135 ACATCCATTTCGCTGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
3712 3823 4.813161 AGATACATCCATTTCGCTGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
3713 3824 4.769688 AGATACATCCATTTCGCTGACAA 58.230 39.130 0.00 0.00 0.00 3.18
3714 3825 4.406648 AGATACATCCATTTCGCTGACA 57.593 40.909 0.00 0.00 0.00 3.58
3715 3826 5.631512 GTCTAGATACATCCATTTCGCTGAC 59.368 44.000 0.00 0.00 0.00 3.51
3716 3827 5.562890 CGTCTAGATACATCCATTTCGCTGA 60.563 44.000 0.00 0.00 0.00 4.26
3717 3828 4.618912 CGTCTAGATACATCCATTTCGCTG 59.381 45.833 0.00 0.00 0.00 5.18
3718 3829 4.278669 ACGTCTAGATACATCCATTTCGCT 59.721 41.667 0.00 0.00 0.00 4.93
3719 3830 4.547532 ACGTCTAGATACATCCATTTCGC 58.452 43.478 0.00 0.00 0.00 4.70
3720 3831 8.744008 AAATACGTCTAGATACATCCATTTCG 57.256 34.615 0.00 0.00 0.00 3.46
3736 3847 9.209175 GGATGCATCTAGAATTAAAATACGTCT 57.791 33.333 25.28 0.00 0.00 4.18
3737 3848 8.988934 TGGATGCATCTAGAATTAAAATACGTC 58.011 33.333 25.28 3.59 0.00 4.34
3738 3849 8.902540 TGGATGCATCTAGAATTAAAATACGT 57.097 30.769 25.28 0.00 0.00 3.57
3747 3858 9.370930 TGGATAAAAATGGATGCATCTAGAATT 57.629 29.630 25.28 16.63 0.00 2.17
3748 3859 8.945195 TGGATAAAAATGGATGCATCTAGAAT 57.055 30.769 25.28 11.76 0.00 2.40
3749 3860 8.945195 ATGGATAAAAATGGATGCATCTAGAA 57.055 30.769 25.28 10.04 29.02 2.10
3750 3861 8.945195 AATGGATAAAAATGGATGCATCTAGA 57.055 30.769 25.28 10.86 33.50 2.43
3753 3864 9.938280 CATAAATGGATAAAAATGGATGCATCT 57.062 29.630 25.28 7.83 33.50 2.90
3754 3865 9.715121 ACATAAATGGATAAAAATGGATGCATC 57.285 29.630 18.81 18.81 33.50 3.91
3755 3866 9.496873 CACATAAATGGATAAAAATGGATGCAT 57.503 29.630 0.00 0.00 35.84 3.96
3756 3867 8.702819 TCACATAAATGGATAAAAATGGATGCA 58.297 29.630 0.00 0.00 0.00 3.96
3757 3868 8.981647 GTCACATAAATGGATAAAAATGGATGC 58.018 33.333 0.00 0.00 0.00 3.91
3761 3872 9.874205 ACTTGTCACATAAATGGATAAAAATGG 57.126 29.630 0.00 0.00 0.00 3.16
3769 3880 8.405531 CCGAAAATACTTGTCACATAAATGGAT 58.594 33.333 0.00 0.00 0.00 3.41
3770 3881 7.608376 TCCGAAAATACTTGTCACATAAATGGA 59.392 33.333 0.00 0.00 0.00 3.41
3771 3882 7.696453 GTCCGAAAATACTTGTCACATAAATGG 59.304 37.037 0.00 0.00 0.00 3.16
3772 3883 7.425309 CGTCCGAAAATACTTGTCACATAAATG 59.575 37.037 0.00 0.00 0.00 2.32
3773 3884 7.413657 CCGTCCGAAAATACTTGTCACATAAAT 60.414 37.037 0.00 0.00 0.00 1.40
3774 3885 6.128499 CCGTCCGAAAATACTTGTCACATAAA 60.128 38.462 0.00 0.00 0.00 1.40
3775 3886 5.349270 CCGTCCGAAAATACTTGTCACATAA 59.651 40.000 0.00 0.00 0.00 1.90
3776 3887 4.865925 CCGTCCGAAAATACTTGTCACATA 59.134 41.667 0.00 0.00 0.00 2.29
3777 3888 3.682858 CCGTCCGAAAATACTTGTCACAT 59.317 43.478 0.00 0.00 0.00 3.21
3778 3889 3.061322 CCGTCCGAAAATACTTGTCACA 58.939 45.455 0.00 0.00 0.00 3.58
3779 3890 3.319755 TCCGTCCGAAAATACTTGTCAC 58.680 45.455 0.00 0.00 0.00 3.67
3780 3891 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
3781 3892 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
3782 3893 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
3783 3894 2.277084 CCCTCCGTCCGAAAATACTTG 58.723 52.381 0.00 0.00 0.00 3.16
3784 3895 1.208776 CCCCTCCGTCCGAAAATACTT 59.791 52.381 0.00 0.00 0.00 2.24
3785 3896 0.828677 CCCCTCCGTCCGAAAATACT 59.171 55.000 0.00 0.00 0.00 2.12
3786 3897 0.179065 CCCCCTCCGTCCGAAAATAC 60.179 60.000 0.00 0.00 0.00 1.89
3787 3898 0.618393 ACCCCCTCCGTCCGAAAATA 60.618 55.000 0.00 0.00 0.00 1.40
3788 3899 0.618393 TACCCCCTCCGTCCGAAAAT 60.618 55.000 0.00 0.00 0.00 1.82
3789 3900 0.618393 ATACCCCCTCCGTCCGAAAA 60.618 55.000 0.00 0.00 0.00 2.29
3790 3901 1.002017 ATACCCCCTCCGTCCGAAA 59.998 57.895 0.00 0.00 0.00 3.46
3791 3902 1.759299 CATACCCCCTCCGTCCGAA 60.759 63.158 0.00 0.00 0.00 4.30
3792 3903 2.015243 ATCATACCCCCTCCGTCCGA 62.015 60.000 0.00 0.00 0.00 4.55
3793 3904 1.119574 AATCATACCCCCTCCGTCCG 61.120 60.000 0.00 0.00 0.00 4.79
3794 3905 0.396811 CAATCATACCCCCTCCGTCC 59.603 60.000 0.00 0.00 0.00 4.79
3795 3906 1.420430 TCAATCATACCCCCTCCGTC 58.580 55.000 0.00 0.00 0.00 4.79
3796 3907 1.768870 CTTCAATCATACCCCCTCCGT 59.231 52.381 0.00 0.00 0.00 4.69
3797 3908 2.047061 TCTTCAATCATACCCCCTCCG 58.953 52.381 0.00 0.00 0.00 4.63
3798 3909 4.519906 TTTCTTCAATCATACCCCCTCC 57.480 45.455 0.00 0.00 0.00 4.30
3799 3910 5.261216 TGTTTTCTTCAATCATACCCCCTC 58.739 41.667 0.00 0.00 0.00 4.30
3800 3911 5.264395 CTGTTTTCTTCAATCATACCCCCT 58.736 41.667 0.00 0.00 0.00 4.79
3801 3912 4.142160 GCTGTTTTCTTCAATCATACCCCC 60.142 45.833 0.00 0.00 0.00 5.40
3802 3913 4.706962 AGCTGTTTTCTTCAATCATACCCC 59.293 41.667 0.00 0.00 0.00 4.95
3803 3914 5.183904 ACAGCTGTTTTCTTCAATCATACCC 59.816 40.000 15.25 0.00 0.00 3.69
3804 3915 6.259550 ACAGCTGTTTTCTTCAATCATACC 57.740 37.500 15.25 0.00 0.00 2.73
3805 3916 9.846248 AAATACAGCTGTTTTCTTCAATCATAC 57.154 29.630 27.06 0.00 0.00 2.39
3856 3967 7.500992 AGGCCACATATTATACCGATGATTAG 58.499 38.462 5.01 0.00 0.00 1.73
3881 4004 9.731819 GAAATATCTATGACGCCTATTTCGATA 57.268 33.333 0.00 0.00 32.36 2.92
3934 4058 8.041323 TCCAAGTTGGATCTTAAAAGCTAGTAG 58.959 37.037 21.05 0.00 42.67 2.57
3935 4059 7.913789 TCCAAGTTGGATCTTAAAAGCTAGTA 58.086 34.615 21.05 0.00 42.67 1.82
3936 4060 6.779860 TCCAAGTTGGATCTTAAAAGCTAGT 58.220 36.000 21.05 0.00 42.67 2.57
3983 4151 5.479306 TGTAACAAGGCTAAGCTCTTACTG 58.521 41.667 0.00 0.00 0.00 2.74
4007 4175 1.449353 CCACCCTGCTAGGATGAGC 59.551 63.158 4.00 0.00 37.67 4.26
4010 4178 1.059098 TATGCCACCCTGCTAGGATG 58.941 55.000 4.00 0.00 37.67 3.51
4050 4218 2.406401 GCTGTAGCATTGCCGCAG 59.594 61.111 19.56 19.56 41.59 5.18
4065 4233 4.030452 GAGCGCGCTGTTTTGGCT 62.030 61.111 41.82 11.78 36.51 4.75
4096 4264 3.151554 ACCGGTGAGTTTTATGGGAAAC 58.848 45.455 6.12 0.00 39.28 2.78
4101 4269 3.128068 GCCTTTACCGGTGAGTTTTATGG 59.872 47.826 19.93 7.28 0.00 2.74
4117 4285 0.692476 TTCAGAGCCTGCTGCCTTTA 59.308 50.000 0.00 0.00 42.71 1.85
4136 4304 3.321039 TGCCTTGGACCATATCAGAGAT 58.679 45.455 0.00 0.00 0.00 2.75
4137 4305 2.763039 TGCCTTGGACCATATCAGAGA 58.237 47.619 0.00 0.00 0.00 3.10
4138 4306 3.409570 CATGCCTTGGACCATATCAGAG 58.590 50.000 0.00 0.00 0.00 3.35
4139 4307 2.487805 GCATGCCTTGGACCATATCAGA 60.488 50.000 6.36 0.00 0.00 3.27
4140 4308 1.884579 GCATGCCTTGGACCATATCAG 59.115 52.381 6.36 0.00 0.00 2.90
4141 4309 1.214923 TGCATGCCTTGGACCATATCA 59.785 47.619 16.68 0.00 0.00 2.15
4142 4310 1.985473 TGCATGCCTTGGACCATATC 58.015 50.000 16.68 0.00 0.00 1.63
4143 4311 2.244695 CATGCATGCCTTGGACCATAT 58.755 47.619 14.93 0.00 0.00 1.78
4162 4330 3.535629 CTGAGCAAGGGTCACCGCA 62.536 63.158 0.00 0.00 43.47 5.69
4170 4338 2.046892 CCCGTCACTGAGCAAGGG 60.047 66.667 0.00 0.00 0.00 3.95
4219 4387 0.179012 GCTCCTCTACGGCTCTACCT 60.179 60.000 0.00 0.00 35.61 3.08
4224 4392 4.273257 GCGGCTCCTCTACGGCTC 62.273 72.222 0.00 0.00 0.00 4.70
4226 4394 2.925162 AATTGCGGCTCCTCTACGGC 62.925 60.000 0.00 0.00 0.00 5.68
4240 4408 1.079888 CAACCCCGGCTGAAATTGC 60.080 57.895 0.00 0.00 0.00 3.56
4248 4416 2.285368 TCTCCATCAACCCCGGCT 60.285 61.111 0.00 0.00 0.00 5.52
4250 4418 2.186903 CGTCTCCATCAACCCCGG 59.813 66.667 0.00 0.00 0.00 5.73
4268 4436 4.593864 GGAGGTCGAGATGGCCGC 62.594 72.222 0.00 0.00 0.00 6.53
4287 4455 3.501950 CTTATTTTTCAGCTTCCCGCAC 58.498 45.455 0.00 0.00 42.61 5.34
4288 4456 2.094752 GCTTATTTTTCAGCTTCCCGCA 60.095 45.455 0.00 0.00 42.61 5.69
4289 4457 2.530177 GCTTATTTTTCAGCTTCCCGC 58.470 47.619 0.00 0.00 39.57 6.13
4290 4458 2.418628 TCGCTTATTTTTCAGCTTCCCG 59.581 45.455 0.00 0.00 33.52 5.14
4292 4460 3.181496 CCCTCGCTTATTTTTCAGCTTCC 60.181 47.826 0.00 0.00 33.52 3.46
4293 4461 3.689649 TCCCTCGCTTATTTTTCAGCTTC 59.310 43.478 0.00 0.00 33.52 3.86
4294 4462 3.686016 TCCCTCGCTTATTTTTCAGCTT 58.314 40.909 0.00 0.00 33.52 3.74
4296 4464 4.434713 TTTCCCTCGCTTATTTTTCAGC 57.565 40.909 0.00 0.00 0.00 4.26
4297 4465 5.807011 CCATTTTCCCTCGCTTATTTTTCAG 59.193 40.000 0.00 0.00 0.00 3.02
4298 4466 5.719173 CCATTTTCCCTCGCTTATTTTTCA 58.281 37.500 0.00 0.00 0.00 2.69
4299 4467 4.566759 GCCATTTTCCCTCGCTTATTTTTC 59.433 41.667 0.00 0.00 0.00 2.29
4300 4468 4.503910 GCCATTTTCCCTCGCTTATTTTT 58.496 39.130 0.00 0.00 0.00 1.94
4301 4469 3.428862 CGCCATTTTCCCTCGCTTATTTT 60.429 43.478 0.00 0.00 0.00 1.82
4302 4470 2.099098 CGCCATTTTCCCTCGCTTATTT 59.901 45.455 0.00 0.00 0.00 1.40
4303 4471 1.676006 CGCCATTTTCCCTCGCTTATT 59.324 47.619 0.00 0.00 0.00 1.40
4304 4472 1.308998 CGCCATTTTCCCTCGCTTAT 58.691 50.000 0.00 0.00 0.00 1.73
4309 4477 2.040544 AGTGCGCCATTTTCCCTCG 61.041 57.895 4.18 0.00 0.00 4.63
4328 4496 1.779724 GTCCGATTCTATTCGCGTCAC 59.220 52.381 5.77 0.00 37.80 3.67
4333 4501 1.687628 CCTCGTCCGATTCTATTCGC 58.312 55.000 0.00 0.00 37.80 4.70
4339 4507 0.681564 AGTGAGCCTCGTCCGATTCT 60.682 55.000 0.00 0.00 0.00 2.40
4344 4512 4.803426 GCCAGTGAGCCTCGTCCG 62.803 72.222 0.00 0.00 0.00 4.79
4414 4582 0.179073 CAACGATCCAGCCCTTCGAT 60.179 55.000 0.00 0.00 36.73 3.59
4425 4593 5.278957 CCAATTCCCCATTATTCAACGATCC 60.279 44.000 0.00 0.00 0.00 3.36
4472 4640 2.183555 GCCCGGAAGACCTACACG 59.816 66.667 0.73 0.00 0.00 4.49
4488 4656 2.080286 TTCTTCTCTACTTGCCGTGC 57.920 50.000 0.00 0.00 0.00 5.34
4491 4659 3.131223 TCCTGATTCTTCTCTACTTGCCG 59.869 47.826 0.00 0.00 0.00 5.69
4503 4671 3.197549 GTGAGCTCCTTCTCCTGATTCTT 59.802 47.826 12.15 0.00 32.22 2.52
4507 4675 1.830477 GTGTGAGCTCCTTCTCCTGAT 59.170 52.381 12.15 0.00 32.22 2.90
4508 4676 1.261480 GTGTGAGCTCCTTCTCCTGA 58.739 55.000 12.15 0.00 32.22 3.86
4509 4677 0.248843 GGTGTGAGCTCCTTCTCCTG 59.751 60.000 12.15 0.00 32.22 3.86
4510 4678 0.178921 TGGTGTGAGCTCCTTCTCCT 60.179 55.000 12.15 0.00 32.22 3.69
4511 4679 0.908198 ATGGTGTGAGCTCCTTCTCC 59.092 55.000 12.15 12.03 32.22 3.71
4512 4680 1.552337 TGATGGTGTGAGCTCCTTCTC 59.448 52.381 12.15 3.03 35.05 2.87
4513 4681 1.649321 TGATGGTGTGAGCTCCTTCT 58.351 50.000 12.15 0.00 35.05 2.85
4514 4682 2.354259 CTTGATGGTGTGAGCTCCTTC 58.646 52.381 12.15 4.75 34.76 3.46
4515 4683 1.612726 GCTTGATGGTGTGAGCTCCTT 60.613 52.381 12.15 0.00 32.54 3.36
4516 4684 0.035630 GCTTGATGGTGTGAGCTCCT 60.036 55.000 12.15 0.00 32.54 3.69
4517 4685 1.028868 GGCTTGATGGTGTGAGCTCC 61.029 60.000 12.15 3.09 35.53 4.70
4518 4686 0.035630 AGGCTTGATGGTGTGAGCTC 60.036 55.000 6.82 6.82 35.53 4.09
4519 4687 0.322277 CAGGCTTGATGGTGTGAGCT 60.322 55.000 0.00 0.00 35.53 4.09
4520 4688 0.607489 ACAGGCTTGATGGTGTGAGC 60.607 55.000 1.40 0.00 0.00 4.26
4521 4689 1.901591 AACAGGCTTGATGGTGTGAG 58.098 50.000 1.40 0.00 0.00 3.51
4522 4690 2.363306 AAACAGGCTTGATGGTGTGA 57.637 45.000 1.40 0.00 0.00 3.58
4523 4691 2.361757 TGAAAACAGGCTTGATGGTGTG 59.638 45.455 1.40 0.00 0.00 3.82
4524 4692 2.665165 TGAAAACAGGCTTGATGGTGT 58.335 42.857 1.40 0.00 0.00 4.16
4525 4693 3.731652 TTGAAAACAGGCTTGATGGTG 57.268 42.857 1.40 0.00 0.00 4.17
4526 4694 3.555586 GCATTGAAAACAGGCTTGATGGT 60.556 43.478 1.40 0.00 0.00 3.55
4527 4695 2.997986 GCATTGAAAACAGGCTTGATGG 59.002 45.455 1.40 0.00 0.00 3.51
4528 4696 3.921677 AGCATTGAAAACAGGCTTGATG 58.078 40.909 1.40 0.00 28.24 3.07
4529 4697 4.039488 TGAAGCATTGAAAACAGGCTTGAT 59.961 37.500 1.40 0.00 39.92 2.57
4530 4698 3.384146 TGAAGCATTGAAAACAGGCTTGA 59.616 39.130 1.40 5.36 39.92 3.02
4531 4699 3.492011 GTGAAGCATTGAAAACAGGCTTG 59.508 43.478 12.97 0.00 39.92 4.01
4532 4700 3.385755 AGTGAAGCATTGAAAACAGGCTT 59.614 39.130 0.00 0.00 41.68 4.35
4533 4701 2.961062 AGTGAAGCATTGAAAACAGGCT 59.039 40.909 0.00 0.00 33.25 4.58
4534 4702 3.243501 TGAGTGAAGCATTGAAAACAGGC 60.244 43.478 0.00 0.00 0.00 4.85
4535 4703 4.543692 CTGAGTGAAGCATTGAAAACAGG 58.456 43.478 0.00 0.00 0.00 4.00
4536 4704 4.037208 ACCTGAGTGAAGCATTGAAAACAG 59.963 41.667 0.00 0.00 0.00 3.16
4537 4705 3.953612 ACCTGAGTGAAGCATTGAAAACA 59.046 39.130 0.00 0.00 0.00 2.83
4538 4706 4.574599 ACCTGAGTGAAGCATTGAAAAC 57.425 40.909 0.00 0.00 0.00 2.43
4539 4707 6.240894 AGATACCTGAGTGAAGCATTGAAAA 58.759 36.000 0.00 0.00 0.00 2.29
4540 4708 5.809001 AGATACCTGAGTGAAGCATTGAAA 58.191 37.500 0.00 0.00 0.00 2.69
4541 4709 5.426689 AGATACCTGAGTGAAGCATTGAA 57.573 39.130 0.00 0.00 0.00 2.69
4542 4710 5.426689 AAGATACCTGAGTGAAGCATTGA 57.573 39.130 0.00 0.00 0.00 2.57
4543 4711 5.645067 TGAAAGATACCTGAGTGAAGCATTG 59.355 40.000 0.00 0.00 0.00 2.82
4544 4712 5.809001 TGAAAGATACCTGAGTGAAGCATT 58.191 37.500 0.00 0.00 0.00 3.56
4545 4713 5.046014 ACTGAAAGATACCTGAGTGAAGCAT 60.046 40.000 0.00 0.00 37.43 3.79
4546 4714 4.284490 ACTGAAAGATACCTGAGTGAAGCA 59.716 41.667 0.00 0.00 37.43 3.91
4547 4715 4.826556 ACTGAAAGATACCTGAGTGAAGC 58.173 43.478 0.00 0.00 37.43 3.86
4548 4716 8.474025 AGATAACTGAAAGATACCTGAGTGAAG 58.526 37.037 0.00 0.00 37.43 3.02
4549 4717 8.367660 AGATAACTGAAAGATACCTGAGTGAA 57.632 34.615 0.00 0.00 37.43 3.18
4550 4718 7.615757 TGAGATAACTGAAAGATACCTGAGTGA 59.384 37.037 0.00 0.00 37.43 3.41
4551 4719 7.776107 TGAGATAACTGAAAGATACCTGAGTG 58.224 38.462 0.00 0.00 37.43 3.51
4552 4720 7.836685 TCTGAGATAACTGAAAGATACCTGAGT 59.163 37.037 0.00 0.00 37.43 3.41
4553 4721 8.134895 GTCTGAGATAACTGAAAGATACCTGAG 58.865 40.741 0.00 0.00 37.43 3.35
4554 4722 7.836685 AGTCTGAGATAACTGAAAGATACCTGA 59.163 37.037 0.00 0.00 37.43 3.86
4555 4723 8.006298 AGTCTGAGATAACTGAAAGATACCTG 57.994 38.462 0.00 0.00 37.43 4.00
4556 4724 7.286775 GGAGTCTGAGATAACTGAAAGATACCT 59.713 40.741 0.00 0.00 37.43 3.08
4557 4725 7.068839 TGGAGTCTGAGATAACTGAAAGATACC 59.931 40.741 0.00 0.00 37.43 2.73
4558 4726 8.001881 TGGAGTCTGAGATAACTGAAAGATAC 57.998 38.462 0.00 0.00 37.43 2.24
4559 4727 8.595362 TTGGAGTCTGAGATAACTGAAAGATA 57.405 34.615 0.00 0.00 37.43 1.98
4560 4728 7.364585 CCTTGGAGTCTGAGATAACTGAAAGAT 60.365 40.741 0.00 0.00 37.43 2.40
4561 4729 6.071108 CCTTGGAGTCTGAGATAACTGAAAGA 60.071 42.308 0.00 0.00 37.43 2.52
4562 4730 6.105333 CCTTGGAGTCTGAGATAACTGAAAG 58.895 44.000 0.00 0.00 42.29 2.62
4563 4731 5.544176 ACCTTGGAGTCTGAGATAACTGAAA 59.456 40.000 0.00 0.00 0.00 2.69
4564 4732 5.087323 ACCTTGGAGTCTGAGATAACTGAA 58.913 41.667 0.00 0.00 0.00 3.02
4565 4733 4.678256 ACCTTGGAGTCTGAGATAACTGA 58.322 43.478 0.00 0.00 0.00 3.41
4566 4734 5.413309 AACCTTGGAGTCTGAGATAACTG 57.587 43.478 0.00 0.00 0.00 3.16
4567 4735 5.544176 TGAAACCTTGGAGTCTGAGATAACT 59.456 40.000 0.00 0.00 0.00 2.24
4568 4736 5.794894 TGAAACCTTGGAGTCTGAGATAAC 58.205 41.667 0.00 0.00 0.00 1.89
4569 4737 5.780282 TCTGAAACCTTGGAGTCTGAGATAA 59.220 40.000 0.00 0.00 0.00 1.75
4570 4738 5.333581 TCTGAAACCTTGGAGTCTGAGATA 58.666 41.667 0.00 0.00 0.00 1.98
4571 4739 4.163427 TCTGAAACCTTGGAGTCTGAGAT 58.837 43.478 0.00 0.00 0.00 2.75
4572 4740 3.576861 TCTGAAACCTTGGAGTCTGAGA 58.423 45.455 0.00 0.00 0.00 3.27
4573 4741 4.342862 TTCTGAAACCTTGGAGTCTGAG 57.657 45.455 0.00 0.00 0.00 3.35
4574 4742 4.451900 GTTTCTGAAACCTTGGAGTCTGA 58.548 43.478 19.96 0.00 35.35 3.27
4575 4743 3.248602 CGTTTCTGAAACCTTGGAGTCTG 59.751 47.826 23.42 5.62 38.14 3.51
4576 4744 3.118371 ACGTTTCTGAAACCTTGGAGTCT 60.118 43.478 23.42 0.00 38.14 3.24
4577 4745 3.203716 ACGTTTCTGAAACCTTGGAGTC 58.796 45.455 23.42 0.55 38.14 3.36
4578 4746 3.277142 ACGTTTCTGAAACCTTGGAGT 57.723 42.857 23.42 13.53 38.14 3.85
4579 4747 3.952535 CAACGTTTCTGAAACCTTGGAG 58.047 45.455 24.75 15.20 38.14 3.86
4581 4749 3.078594 CCAACGTTTCTGAAACCTTGG 57.921 47.619 31.05 31.05 44.83 3.61
4582 4750 4.351192 CTTCCAACGTTTCTGAAACCTTG 58.649 43.478 25.16 25.16 38.14 3.61
4583 4751 3.380320 CCTTCCAACGTTTCTGAAACCTT 59.620 43.478 23.42 16.73 38.14 3.50
4584 4752 2.949644 CCTTCCAACGTTTCTGAAACCT 59.050 45.455 23.42 12.23 38.14 3.50
4585 4753 2.946990 TCCTTCCAACGTTTCTGAAACC 59.053 45.455 23.42 9.40 38.14 3.27
4586 4754 3.875134 TCTCCTTCCAACGTTTCTGAAAC 59.125 43.478 20.54 20.54 38.02 2.78
4587 4755 4.145365 TCTCCTTCCAACGTTTCTGAAA 57.855 40.909 0.00 0.00 0.00 2.69
4588 4756 3.830744 TCTCCTTCCAACGTTTCTGAA 57.169 42.857 0.00 1.16 0.00 3.02
4589 4757 3.557054 CCATCTCCTTCCAACGTTTCTGA 60.557 47.826 0.00 0.00 0.00 3.27
4590 4758 2.744202 CCATCTCCTTCCAACGTTTCTG 59.256 50.000 0.00 0.00 0.00 3.02
4591 4759 2.637872 TCCATCTCCTTCCAACGTTTCT 59.362 45.455 0.00 0.00 0.00 2.52
4592 4760 3.003480 CTCCATCTCCTTCCAACGTTTC 58.997 50.000 0.00 0.00 0.00 2.78
4593 4761 2.876079 GCTCCATCTCCTTCCAACGTTT 60.876 50.000 0.00 0.00 0.00 3.60
4594 4762 1.339151 GCTCCATCTCCTTCCAACGTT 60.339 52.381 0.00 0.00 0.00 3.99
4595 4763 0.250513 GCTCCATCTCCTTCCAACGT 59.749 55.000 0.00 0.00 0.00 3.99
4596 4764 0.807667 CGCTCCATCTCCTTCCAACG 60.808 60.000 0.00 0.00 0.00 4.10
4597 4765 1.092345 GCGCTCCATCTCCTTCCAAC 61.092 60.000 0.00 0.00 0.00 3.77
4598 4766 1.221840 GCGCTCCATCTCCTTCCAA 59.778 57.895 0.00 0.00 0.00 3.53
4599 4767 2.903357 GCGCTCCATCTCCTTCCA 59.097 61.111 0.00 0.00 0.00 3.53
4600 4768 2.279784 CGCGCTCCATCTCCTTCC 60.280 66.667 5.56 0.00 0.00 3.46
4601 4769 1.299773 CTCGCGCTCCATCTCCTTC 60.300 63.158 5.56 0.00 0.00 3.46
4602 4770 1.754621 TCTCGCGCTCCATCTCCTT 60.755 57.895 5.56 0.00 0.00 3.36
4603 4771 2.124109 TCTCGCGCTCCATCTCCT 60.124 61.111 5.56 0.00 0.00 3.69
4604 4772 2.026879 GTCTCGCGCTCCATCTCC 59.973 66.667 5.56 0.00 0.00 3.71
4605 4773 1.008995 GAGTCTCGCGCTCCATCTC 60.009 63.158 5.56 3.34 0.00 2.75
4606 4774 2.829206 CGAGTCTCGCGCTCCATCT 61.829 63.158 9.74 0.00 31.14 2.90
4607 4775 2.352915 CGAGTCTCGCGCTCCATC 60.353 66.667 9.74 0.00 31.14 3.51
4608 4776 3.134792 ACGAGTCTCGCGCTCCAT 61.135 61.111 22.00 0.00 45.12 3.41
4609 4777 4.103103 CACGAGTCTCGCGCTCCA 62.103 66.667 22.00 0.00 45.12 3.86
4610 4778 3.726631 CTCACGAGTCTCGCGCTCC 62.727 68.421 22.00 0.00 45.12 4.70
4611 4779 2.276994 CTCACGAGTCTCGCGCTC 60.277 66.667 22.00 0.90 45.12 5.03
4612 4780 2.742760 TCTCACGAGTCTCGCGCT 60.743 61.111 22.00 0.00 45.12 5.92
4613 4781 2.574736 GTCTCACGAGTCTCGCGC 60.575 66.667 22.00 0.00 45.12 6.86
4614 4782 1.510204 GTGTCTCACGAGTCTCGCG 60.510 63.158 22.00 13.13 45.12 5.87
4615 4783 4.443784 GTGTCTCACGAGTCTCGC 57.556 61.111 22.00 6.04 45.12 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.