Multiple sequence alignment - TraesCS7D01G432600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G432600 chr7D 100.000 4405 0 0 1 4405 552278888 552283292 0.000000e+00 8135.0
1 TraesCS7D01G432600 chr7D 89.066 503 51 4 3573 4074 12425000 12425499 4.840000e-174 621.0
2 TraesCS7D01G432600 chr7D 90.625 64 5 1 3507 3570 552281247 552281309 2.820000e-12 84.2
3 TraesCS7D01G432600 chr7D 90.625 64 5 1 2360 2422 552282394 552282457 2.820000e-12 84.2
4 TraesCS7D01G432600 chr7A 90.066 3473 214 73 117 3504 637912854 637916280 0.000000e+00 4381.0
5 TraesCS7D01G432600 chr7A 90.860 372 32 2 3705 4075 46971651 46971281 8.510000e-137 497.0
6 TraesCS7D01G432600 chr7A 96.154 78 3 0 3293 3370 637918583 637918660 1.290000e-25 128.0
7 TraesCS7D01G432600 chr7B 91.304 2300 167 19 79 2362 597237434 597239716 0.000000e+00 3109.0
8 TraesCS7D01G432600 chr7B 91.892 592 42 4 2918 3504 597240467 597241057 0.000000e+00 822.0
9 TraesCS7D01G432600 chr7B 83.380 361 33 16 2426 2761 597240098 597240456 4.280000e-80 309.0
10 TraesCS7D01G432600 chr7B 86.282 277 28 7 2359 2627 597239746 597240020 4.310000e-75 292.0
11 TraesCS7D01G432600 chr7B 83.333 174 24 2 4233 4405 597248703 597248872 5.900000e-34 156.0
12 TraesCS7D01G432600 chr7B 79.121 91 13 5 2759 2846 166589408 166589321 1.710000e-04 58.4
13 TraesCS7D01G432600 chr2D 89.662 503 49 3 3573 4075 470059872 470060371 4.800000e-179 638.0
14 TraesCS7D01G432600 chr2D 75.188 399 74 16 1 383 100958303 100957914 9.800000e-37 165.0
15 TraesCS7D01G432600 chr2D 73.318 446 94 11 4 430 30677773 30677334 1.650000e-29 141.0
16 TraesCS7D01G432600 chr2D 78.534 191 35 1 33 223 477259571 477259387 2.150000e-23 121.0
17 TraesCS7D01G432600 chr2D 73.874 333 62 15 2 330 403464798 403465109 4.660000e-20 110.0
18 TraesCS7D01G432600 chr5A 88.955 507 51 5 3572 4077 311941905 311941403 4.840000e-174 621.0
19 TraesCS7D01G432600 chr5A 87.327 505 61 3 3572 4075 548397955 548397453 3.820000e-160 575.0
20 TraesCS7D01G432600 chr5A 73.930 257 56 7 174 421 411086062 411085808 4.690000e-15 93.5
21 TraesCS7D01G432600 chr5A 92.105 38 3 0 2760 2797 706500521 706500484 2.000000e-03 54.7
22 TraesCS7D01G432600 chr5D 88.627 510 45 8 3572 4076 504755654 504755153 3.770000e-170 608.0
23 TraesCS7D01G432600 chr5D 88.431 510 40 9 3569 4074 558331638 558332132 8.150000e-167 597.0
24 TraesCS7D01G432600 chr5D 87.838 74 8 1 2759 2831 408657759 408657686 7.850000e-13 86.1
25 TraesCS7D01G432600 chr5D 91.071 56 5 0 2805 2860 463188945 463188890 4.720000e-10 76.8
26 TraesCS7D01G432600 chr3B 91.223 376 32 1 3699 4074 139464102 139464476 1.090000e-140 510.0
27 TraesCS7D01G432600 chr3B 74.497 447 90 10 1 430 734728519 734728958 5.860000e-39 172.0
28 TraesCS7D01G432600 chr6D 90.323 372 36 0 3705 4076 364063027 364062656 5.120000e-134 488.0
29 TraesCS7D01G432600 chr4B 91.195 159 12 2 2756 2912 184302587 184302745 9.600000e-52 215.0
30 TraesCS7D01G432600 chr3D 92.308 143 9 2 2770 2910 73207013 73206871 7.470000e-48 202.0
31 TraesCS7D01G432600 chr5B 80.095 211 40 2 174 383 216404832 216405041 5.900000e-34 156.0
32 TraesCS7D01G432600 chrUn 75.342 219 43 8 174 383 55969623 55969839 1.300000e-15 95.3
33 TraesCS7D01G432600 chrUn 75.342 219 43 8 174 383 56004024 56003808 1.300000e-15 95.3
34 TraesCS7D01G432600 chrUn 75.342 219 43 8 174 383 230904691 230904907 1.300000e-15 95.3
35 TraesCS7D01G432600 chr6B 80.000 135 20 3 302 430 712331204 712331337 4.690000e-15 93.5
36 TraesCS7D01G432600 chr4D 84.211 76 10 2 2796 2869 491395897 491395972 6.110000e-09 73.1
37 TraesCS7D01G432600 chr3A 85.938 64 8 1 2795 2857 710783817 710783880 2.840000e-07 67.6
38 TraesCS7D01G432600 chr2A 92.500 40 2 1 2759 2797 476398537 476398498 6.150000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G432600 chr7D 552278888 552283292 4404 False 2767.8 8135 93.7500 1 4405 3 chr7D.!!$F2 4404
1 TraesCS7D01G432600 chr7A 637912854 637918660 5806 False 2254.5 4381 93.1100 117 3504 2 chr7A.!!$F1 3387
2 TraesCS7D01G432600 chr7B 597237434 597241057 3623 False 1133.0 3109 88.2145 79 3504 4 chr7B.!!$F2 3425
3 TraesCS7D01G432600 chr5A 311941403 311941905 502 True 621.0 621 88.9550 3572 4077 1 chr5A.!!$R1 505
4 TraesCS7D01G432600 chr5A 548397453 548397955 502 True 575.0 575 87.3270 3572 4075 1 chr5A.!!$R3 503
5 TraesCS7D01G432600 chr5D 504755153 504755654 501 True 608.0 608 88.6270 3572 4076 1 chr5D.!!$R3 504

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
246 247 0.174389 CATGACAGAGACTGGGTCGG 59.826 60.0 0.00 0.00 37.67 4.79 F
1686 1723 0.034767 TGCTTGAGGGATGCCTTGAG 60.035 55.0 7.42 9.75 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2094 2131 0.339859 TAGTGACCTCTGCCCCATCT 59.660 55.0 0.0 0.0 0.00 2.90 R
3540 3930 0.179089 AGTGCAGCCATTCTCGCTAG 60.179 55.0 0.0 0.0 33.91 3.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.592194 GAAGTCGTCGTGCTAATGACA 58.408 47.619 8.09 0.00 41.66 3.58
21 22 2.941453 AGTCGTCGTGCTAATGACAT 57.059 45.000 8.09 0.00 41.66 3.06
22 23 4.348656 GAAGTCGTCGTGCTAATGACATA 58.651 43.478 8.09 0.00 41.66 2.29
23 24 3.692576 AGTCGTCGTGCTAATGACATAC 58.307 45.455 8.09 1.62 41.66 2.39
24 25 3.128068 AGTCGTCGTGCTAATGACATACA 59.872 43.478 8.09 0.00 41.66 2.29
25 26 3.855379 GTCGTCGTGCTAATGACATACAA 59.145 43.478 0.00 0.00 41.66 2.41
26 27 4.027621 GTCGTCGTGCTAATGACATACAAG 60.028 45.833 0.00 0.00 41.66 3.16
27 28 4.102649 CGTCGTGCTAATGACATACAAGA 58.897 43.478 0.00 0.00 41.66 3.02
28 29 4.027621 CGTCGTGCTAATGACATACAAGAC 60.028 45.833 15.69 15.69 41.66 3.01
29 30 4.862574 GTCGTGCTAATGACATACAAGACA 59.137 41.667 18.47 6.42 41.29 3.41
30 31 5.347635 GTCGTGCTAATGACATACAAGACAA 59.652 40.000 18.47 0.00 41.29 3.18
31 32 5.576774 TCGTGCTAATGACATACAAGACAAG 59.423 40.000 0.00 0.00 0.00 3.16
32 33 5.576774 CGTGCTAATGACATACAAGACAAGA 59.423 40.000 0.00 0.00 0.00 3.02
33 34 6.454318 CGTGCTAATGACATACAAGACAAGAC 60.454 42.308 0.00 0.00 0.00 3.01
34 35 6.368791 GTGCTAATGACATACAAGACAAGACA 59.631 38.462 0.00 0.00 0.00 3.41
35 36 6.368791 TGCTAATGACATACAAGACAAGACAC 59.631 38.462 0.00 0.00 0.00 3.67
36 37 6.591834 GCTAATGACATACAAGACAAGACACT 59.408 38.462 0.00 0.00 0.00 3.55
37 38 7.759886 GCTAATGACATACAAGACAAGACACTA 59.240 37.037 0.00 0.00 0.00 2.74
38 39 9.295214 CTAATGACATACAAGACAAGACACTAG 57.705 37.037 0.00 0.00 0.00 2.57
39 40 6.894339 TGACATACAAGACAAGACACTAGA 57.106 37.500 0.00 0.00 0.00 2.43
40 41 7.284919 TGACATACAAGACAAGACACTAGAA 57.715 36.000 0.00 0.00 0.00 2.10
41 42 7.145985 TGACATACAAGACAAGACACTAGAAC 58.854 38.462 0.00 0.00 0.00 3.01
42 43 7.050970 ACATACAAGACAAGACACTAGAACA 57.949 36.000 0.00 0.00 0.00 3.18
43 44 7.497595 ACATACAAGACAAGACACTAGAACAA 58.502 34.615 0.00 0.00 0.00 2.83
44 45 8.150945 ACATACAAGACAAGACACTAGAACAAT 58.849 33.333 0.00 0.00 0.00 2.71
45 46 9.639601 CATACAAGACAAGACACTAGAACAATA 57.360 33.333 0.00 0.00 0.00 1.90
48 49 9.209175 ACAAGACAAGACACTAGAACAATAATC 57.791 33.333 0.00 0.00 0.00 1.75
49 50 8.376203 CAAGACAAGACACTAGAACAATAATCG 58.624 37.037 0.00 0.00 0.00 3.34
50 51 7.603651 AGACAAGACACTAGAACAATAATCGT 58.396 34.615 0.00 0.00 0.00 3.73
51 52 7.755822 AGACAAGACACTAGAACAATAATCGTC 59.244 37.037 0.00 0.00 0.00 4.20
52 53 6.527023 ACAAGACACTAGAACAATAATCGTCG 59.473 38.462 0.00 0.00 0.00 5.12
53 54 5.035443 AGACACTAGAACAATAATCGTCGC 58.965 41.667 0.00 0.00 0.00 5.19
54 55 4.110482 ACACTAGAACAATAATCGTCGCC 58.890 43.478 0.00 0.00 0.00 5.54
55 56 3.179795 CACTAGAACAATAATCGTCGCCG 59.820 47.826 0.00 0.00 0.00 6.46
64 65 3.899395 TCGTCGCCGATGAAGAGA 58.101 55.556 6.54 0.00 38.40 3.10
65 66 2.177044 TCGTCGCCGATGAAGAGAA 58.823 52.632 6.54 0.00 38.40 2.87
66 67 0.738975 TCGTCGCCGATGAAGAGAAT 59.261 50.000 6.54 0.00 38.40 2.40
67 68 1.124462 CGTCGCCGATGAAGAGAATC 58.876 55.000 0.00 0.00 35.63 2.52
68 69 1.124462 GTCGCCGATGAAGAGAATCG 58.876 55.000 0.00 0.00 45.08 3.34
69 70 0.738975 TCGCCGATGAAGAGAATCGT 59.261 50.000 5.24 0.00 44.22 3.73
70 71 1.944709 TCGCCGATGAAGAGAATCGTA 59.055 47.619 5.24 0.00 44.22 3.43
71 72 2.031944 TCGCCGATGAAGAGAATCGTAG 60.032 50.000 5.24 0.00 44.22 3.51
72 73 2.031944 CGCCGATGAAGAGAATCGTAGA 60.032 50.000 5.24 0.00 44.22 2.59
73 74 3.301706 GCCGATGAAGAGAATCGTAGAC 58.698 50.000 5.24 0.00 44.22 2.59
74 75 3.854045 GCCGATGAAGAGAATCGTAGACC 60.854 52.174 5.24 0.00 44.22 3.85
75 76 3.304794 CCGATGAAGAGAATCGTAGACCC 60.305 52.174 5.24 0.00 44.22 4.46
76 77 3.315470 CGATGAAGAGAATCGTAGACCCA 59.685 47.826 0.00 0.00 42.51 4.51
77 78 4.202020 CGATGAAGAGAATCGTAGACCCAA 60.202 45.833 0.00 0.00 42.51 4.12
96 97 4.506625 CCCAAAGAATCCAACCTGTAGACA 60.507 45.833 0.00 0.00 0.00 3.41
97 98 4.455877 CCAAAGAATCCAACCTGTAGACAC 59.544 45.833 0.00 0.00 0.00 3.67
98 99 4.974645 AAGAATCCAACCTGTAGACACA 57.025 40.909 0.00 0.00 0.00 3.72
99 100 4.273148 AGAATCCAACCTGTAGACACAC 57.727 45.455 0.00 0.00 0.00 3.82
100 101 2.743636 ATCCAACCTGTAGACACACG 57.256 50.000 0.00 0.00 0.00 4.49
102 103 2.033372 TCCAACCTGTAGACACACGAA 58.967 47.619 0.00 0.00 0.00 3.85
103 104 2.631062 TCCAACCTGTAGACACACGAAT 59.369 45.455 0.00 0.00 0.00 3.34
104 105 3.827876 TCCAACCTGTAGACACACGAATA 59.172 43.478 0.00 0.00 0.00 1.75
105 106 4.082408 TCCAACCTGTAGACACACGAATAG 60.082 45.833 0.00 0.00 0.00 1.73
106 107 4.174009 CAACCTGTAGACACACGAATAGG 58.826 47.826 0.00 0.00 0.00 2.57
108 109 4.084287 ACCTGTAGACACACGAATAGGAA 58.916 43.478 0.00 0.00 0.00 3.36
109 110 4.082354 ACCTGTAGACACACGAATAGGAAC 60.082 45.833 0.00 0.00 0.00 3.62
110 111 4.082408 CCTGTAGACACACGAATAGGAACA 60.082 45.833 0.00 0.00 0.00 3.18
111 112 4.801891 TGTAGACACACGAATAGGAACAC 58.198 43.478 0.00 0.00 0.00 3.32
112 113 4.278919 TGTAGACACACGAATAGGAACACA 59.721 41.667 0.00 0.00 0.00 3.72
113 114 3.914312 AGACACACGAATAGGAACACAG 58.086 45.455 0.00 0.00 0.00 3.66
114 115 3.572682 AGACACACGAATAGGAACACAGA 59.427 43.478 0.00 0.00 0.00 3.41
115 116 4.220821 AGACACACGAATAGGAACACAGAT 59.779 41.667 0.00 0.00 0.00 2.90
116 117 4.245660 ACACACGAATAGGAACACAGATG 58.754 43.478 0.00 0.00 0.00 2.90
118 119 4.929211 CACACGAATAGGAACACAGATGAA 59.071 41.667 0.00 0.00 0.00 2.57
119 120 4.929808 ACACGAATAGGAACACAGATGAAC 59.070 41.667 0.00 0.00 0.00 3.18
120 121 4.929211 CACGAATAGGAACACAGATGAACA 59.071 41.667 0.00 0.00 0.00 3.18
128 129 4.690748 GGAACACAGATGAACAAAGATCGA 59.309 41.667 0.00 0.00 0.00 3.59
132 133 6.169094 ACACAGATGAACAAAGATCGAATCT 58.831 36.000 0.00 0.00 42.61 2.40
134 135 7.984050 ACACAGATGAACAAAGATCGAATCTAT 59.016 33.333 0.00 0.00 39.08 1.98
146 147 2.296190 TCGAATCTATGTGGATCCACCG 59.704 50.000 36.27 29.19 45.63 4.94
155 156 3.226777 TGTGGATCCACCGAAAACAAAT 58.773 40.909 36.27 0.00 45.63 2.32
158 159 3.639094 TGGATCCACCGAAAACAAATGTT 59.361 39.130 11.44 0.00 42.61 2.71
170 171 0.179140 CAAATGTTGGCCGAATCCCG 60.179 55.000 0.00 0.00 38.18 5.14
191 192 0.391263 AAGATCCGCCGGAGACAAAC 60.391 55.000 13.12 0.00 34.05 2.93
193 194 3.325201 ATCCGCCGGAGACAAACCC 62.325 63.158 13.12 0.00 34.05 4.11
204 205 4.904590 CAAACCCCCACACGCCCA 62.905 66.667 0.00 0.00 0.00 5.36
228 229 1.292223 GACACTAGAAGCACCGCCA 59.708 57.895 0.00 0.00 0.00 5.69
242 243 1.153489 CGCCATGACAGAGACTGGG 60.153 63.158 0.00 0.00 35.51 4.45
243 244 1.892819 CGCCATGACAGAGACTGGGT 61.893 60.000 0.00 0.00 35.51 4.51
246 247 0.174389 CATGACAGAGACTGGGTCGG 59.826 60.000 0.00 0.00 37.67 4.79
250 251 2.055042 CAGAGACTGGGTCGGGAGG 61.055 68.421 0.00 0.00 37.67 4.30
274 275 6.325919 ACCTTATTCTATCTTCAGAGAGCG 57.674 41.667 0.00 0.00 34.85 5.03
277 278 6.239176 CCTTATTCTATCTTCAGAGAGCGGTT 60.239 42.308 0.00 0.00 34.85 4.44
290 291 3.458163 CGGTTGCCGCCTCTCCTA 61.458 66.667 0.00 0.00 41.17 2.94
294 295 1.140252 GGTTGCCGCCTCTCCTATTTA 59.860 52.381 0.00 0.00 0.00 1.40
318 319 6.184789 AGGAAGGACACAAACTCTAACAAAA 58.815 36.000 0.00 0.00 0.00 2.44
364 365 4.530857 GGACCAGGATCCACCGCG 62.531 72.222 15.82 0.00 44.74 6.46
399 403 1.812922 GCGAGACGAGGTAGACCGA 60.813 63.158 0.00 0.00 42.08 4.69
406 410 2.124403 AGGTAGACCGACGGCGAT 60.124 61.111 15.16 0.00 42.08 4.58
430 434 2.112297 GGGAGGCACACGAAACCA 59.888 61.111 0.00 0.00 0.00 3.67
433 437 1.586154 GGAGGCACACGAAACCATGG 61.586 60.000 11.19 11.19 0.00 3.66
436 440 2.560861 CACACGAAACCATGGCCG 59.439 61.111 13.04 15.49 0.00 6.13
437 441 3.361977 ACACGAAACCATGGCCGC 61.362 61.111 13.04 0.00 0.00 6.53
443 447 2.830186 GAAACCATGGCCGCTGGGTA 62.830 60.000 23.91 0.00 38.14 3.69
482 486 1.079336 GTACGAGCAGGTGTTCCCC 60.079 63.158 0.00 0.00 0.00 4.81
501 505 3.120792 CCCACGTATTCAACTATCCACG 58.879 50.000 0.00 0.00 35.62 4.94
513 517 2.760092 ACTATCCACGCATGCCATTTTT 59.240 40.909 13.15 0.00 0.00 1.94
527 531 9.211485 GCATGCCATTTTTAATGCTATAAGATT 57.789 29.630 6.36 0.00 41.71 2.40
529 533 9.715121 ATGCCATTTTTAATGCTATAAGATTGG 57.285 29.630 0.00 8.11 0.00 3.16
530 534 8.703743 TGCCATTTTTAATGCTATAAGATTGGT 58.296 29.630 11.46 0.00 29.69 3.67
547 551 4.974368 TTGGTAGGATGTTTAATTGCGG 57.026 40.909 0.00 0.00 0.00 5.69
549 553 3.942748 TGGTAGGATGTTTAATTGCGGAC 59.057 43.478 0.00 0.00 0.00 4.79
552 556 5.818857 GGTAGGATGTTTAATTGCGGACTAA 59.181 40.000 0.00 0.00 0.00 2.24
583 596 5.139727 TGATTGTTCAAAGAGGTTGGATGT 58.860 37.500 0.00 0.00 37.85 3.06
596 609 9.533831 AAGAGGTTGGATGTATGAAAAATTACT 57.466 29.630 0.00 0.00 0.00 2.24
661 674 7.655236 TGGTTTGTAATCTTACGAATCGAAA 57.345 32.000 10.55 0.00 39.81 3.46
662 675 7.512297 TGGTTTGTAATCTTACGAATCGAAAC 58.488 34.615 10.55 5.99 39.81 2.78
663 676 6.957635 GGTTTGTAATCTTACGAATCGAAACC 59.042 38.462 10.55 11.42 38.79 3.27
665 678 5.722263 TGTAATCTTACGAATCGAAACCCA 58.278 37.500 10.55 0.00 36.45 4.51
666 679 6.342906 TGTAATCTTACGAATCGAAACCCAT 58.657 36.000 10.55 0.00 36.45 4.00
667 680 5.734855 AATCTTACGAATCGAAACCCATG 57.265 39.130 10.55 0.00 0.00 3.66
669 682 5.327616 TCTTACGAATCGAAACCCATGTA 57.672 39.130 10.55 0.00 0.00 2.29
670 683 5.345702 TCTTACGAATCGAAACCCATGTAG 58.654 41.667 10.55 0.00 0.00 2.74
709 722 8.884124 TTAGGATCAAATTCCTCACAAATTCT 57.116 30.769 0.00 0.00 42.71 2.40
712 725 8.309656 AGGATCAAATTCCTCACAAATTCTTTC 58.690 33.333 0.00 0.00 42.71 2.62
723 736 7.358683 CCTCACAAATTCTTTCGCAAATTCTTC 60.359 37.037 0.00 0.00 0.00 2.87
868 905 0.457337 GCGTCCGTTTATGACCGAGT 60.457 55.000 0.00 0.00 0.00 4.18
873 910 1.065358 CGTTTATGACCGAGTTGCGT 58.935 50.000 0.00 0.00 38.67 5.24
902 939 0.966875 TGCGATTGCCCATCTGCTTT 60.967 50.000 1.50 0.00 41.78 3.51
914 951 0.667993 TCTGCTTTCACAAAAGGGCG 59.332 50.000 0.58 0.00 41.87 6.13
915 952 0.385390 CTGCTTTCACAAAAGGGCGT 59.615 50.000 0.58 0.00 41.87 5.68
916 953 0.820871 TGCTTTCACAAAAGGGCGTT 59.179 45.000 0.58 0.00 41.87 4.84
954 991 1.477295 CCCGACCACTCTTCTACCTTC 59.523 57.143 0.00 0.00 0.00 3.46
1101 1138 1.374947 CCCCAAGAAGACCAGCGAA 59.625 57.895 0.00 0.00 0.00 4.70
1109 1146 0.242825 AAGACCAGCGAATCGACGAA 59.757 50.000 6.91 0.00 35.09 3.85
1320 1357 3.519930 GACGTCCTCGGCCTCCTC 61.520 72.222 3.51 0.00 39.49 3.71
1641 1678 2.672874 CGTGGAGAAATTCATCGCAGAA 59.327 45.455 0.00 0.00 43.58 3.02
1656 1693 0.108615 CAGAACACGAGGAGCCGAAT 60.109 55.000 0.00 0.00 0.00 3.34
1677 1714 4.020617 CCGGTGCTGCTTGAGGGA 62.021 66.667 0.00 0.00 0.00 4.20
1686 1723 0.034767 TGCTTGAGGGATGCCTTGAG 60.035 55.000 7.42 9.75 0.00 3.02
1719 1756 0.690192 TGCAGAAATGGACGAGGGAA 59.310 50.000 0.00 0.00 0.00 3.97
1726 1763 4.656112 AGAAATGGACGAGGGAATATCTGT 59.344 41.667 0.00 0.00 0.00 3.41
1794 1831 2.365941 GCCACTGGATAGGTACTTCCTC 59.634 54.545 0.00 0.00 44.42 3.71
1825 1862 3.151022 CGGAGGAGGAGAGGCCAC 61.151 72.222 5.01 0.00 40.02 5.01
1980 2017 4.227134 CCGGCTGGATCAGGGTCG 62.227 72.222 5.28 0.00 37.49 4.79
1992 2029 0.736325 CAGGGTCGTCGTTCCATGTC 60.736 60.000 12.78 0.00 31.91 3.06
2004 2041 3.181490 CGTTCCATGTCGATCCTAACTCA 60.181 47.826 0.00 0.00 0.00 3.41
2007 2044 3.116300 CCATGTCGATCCTAACTCAACG 58.884 50.000 0.00 0.00 0.00 4.10
2118 2155 2.736826 GGCAGAGGTCACTAGCCCC 61.737 68.421 0.00 0.00 40.35 5.80
2297 2334 3.868077 CAGAACTATGTGAGCAGGTTAGC 59.132 47.826 0.00 0.00 0.00 3.09
2313 2350 5.587844 CAGGTTAGCTTTCAGATTGCATACT 59.412 40.000 0.00 0.00 0.00 2.12
2314 2351 6.094603 CAGGTTAGCTTTCAGATTGCATACTT 59.905 38.462 0.00 0.00 0.00 2.24
2320 2357 5.284660 GCTTTCAGATTGCATACTTGTTTCG 59.715 40.000 0.00 0.00 0.00 3.46
2321 2358 4.944962 TCAGATTGCATACTTGTTTCGG 57.055 40.909 0.00 0.00 0.00 4.30
2386 2458 6.442513 AGTAAGCTTCTGCAATTTGTATCC 57.557 37.500 0.00 0.00 42.74 2.59
2407 2479 3.223435 CTTCATCTAGGGAGAACGGCTA 58.777 50.000 0.00 0.00 34.61 3.93
2408 2480 2.584236 TCATCTAGGGAGAACGGCTAC 58.416 52.381 0.00 0.00 34.61 3.58
2412 2484 1.405821 CTAGGGAGAACGGCTACACTG 59.594 57.143 0.00 0.00 0.00 3.66
2427 2499 4.738252 GCTACACTGTTTTGTACCTTTTGC 59.262 41.667 0.00 0.00 0.00 3.68
2448 2523 4.141756 TGCATGAACACATTCCCAAAACTT 60.142 37.500 0.00 0.00 33.49 2.66
2504 2579 3.924686 CACAGCCAGAATTGCAAGAAATC 59.075 43.478 4.94 0.75 0.00 2.17
2516 2591 9.387257 GAATTGCAAGAAATCCCAATCTAAAAT 57.613 29.630 4.94 0.00 0.00 1.82
2586 2666 7.270757 TGCTTGAAAGACTGCTACATTTTTA 57.729 32.000 0.00 0.00 0.00 1.52
2595 2675 8.621532 AGACTGCTACATTTTTATTGACAGAA 57.378 30.769 0.00 0.00 0.00 3.02
2628 2992 6.767524 TTGCCCGTGTATTCTTCAATTTAT 57.232 33.333 0.00 0.00 0.00 1.40
2651 3015 7.997773 ATTTCTATGCATATCACTTCAGCAT 57.002 32.000 6.92 0.00 46.53 3.79
2653 3017 7.430992 TTCTATGCATATCACTTCAGCATTC 57.569 36.000 6.92 0.00 42.76 2.67
2999 3385 2.706339 ATCCTGGCTTTAGCTCAGTG 57.294 50.000 14.73 9.20 41.70 3.66
3107 3497 7.884257 TGAGTGAACATGCTATTTTCATGAAA 58.116 30.769 16.91 16.91 42.84 2.69
3188 3578 5.757850 ACCTGTTGAATGTTCTTGACTTC 57.242 39.130 0.00 0.00 0.00 3.01
3212 3602 0.112995 AGAGGCCCAATGCAAGTGAA 59.887 50.000 0.00 0.00 43.89 3.18
3335 3725 2.263852 CAGAAGGCTGCTGCTCGA 59.736 61.111 10.16 0.00 39.59 4.04
3398 3788 3.906846 ACACTGGAGGATTCAAGTTCTCT 59.093 43.478 0.00 0.00 35.31 3.10
3401 3791 5.411053 CACTGGAGGATTCAAGTTCTCTTTC 59.589 44.000 0.00 0.00 35.31 2.62
3475 3865 7.392953 TCCTGTTTACATGAGCAATCACATTTA 59.607 33.333 0.00 0.00 0.00 1.40
3510 3900 1.278127 CTTGGGTTCATGGGAGTACGT 59.722 52.381 0.00 0.00 0.00 3.57
3512 3902 1.826720 TGGGTTCATGGGAGTACGTAC 59.173 52.381 18.10 18.10 0.00 3.67
3513 3903 2.105766 GGGTTCATGGGAGTACGTACT 58.894 52.381 27.71 27.71 39.71 2.73
3514 3904 3.290710 GGGTTCATGGGAGTACGTACTA 58.709 50.000 27.44 13.43 36.50 1.82
3515 3905 3.701040 GGGTTCATGGGAGTACGTACTAA 59.299 47.826 27.44 16.44 36.50 2.24
3516 3906 4.202090 GGGTTCATGGGAGTACGTACTAAG 60.202 50.000 27.44 15.11 36.50 2.18
3517 3907 4.357996 GTTCATGGGAGTACGTACTAAGC 58.642 47.826 27.44 15.34 36.50 3.09
3518 3908 3.894759 TCATGGGAGTACGTACTAAGCT 58.105 45.455 27.44 10.81 36.50 3.74
3519 3909 4.275810 TCATGGGAGTACGTACTAAGCTT 58.724 43.478 27.44 3.48 36.50 3.74
3520 3910 4.337555 TCATGGGAGTACGTACTAAGCTTC 59.662 45.833 27.44 14.13 36.50 3.86
3521 3911 3.960571 TGGGAGTACGTACTAAGCTTCT 58.039 45.455 27.44 3.77 36.50 2.85
3522 3912 3.693085 TGGGAGTACGTACTAAGCTTCTG 59.307 47.826 27.44 0.00 36.50 3.02
3523 3913 3.488890 GGGAGTACGTACTAAGCTTCTGC 60.489 52.174 27.44 11.83 36.50 4.26
3524 3914 3.128242 GGAGTACGTACTAAGCTTCTGCA 59.872 47.826 27.44 0.00 37.99 4.41
3525 3915 4.380233 GGAGTACGTACTAAGCTTCTGCAA 60.380 45.833 27.44 0.00 37.99 4.08
3526 3916 5.326200 AGTACGTACTAAGCTTCTGCAAT 57.674 39.130 26.36 0.00 36.82 3.56
3527 3917 5.721232 AGTACGTACTAAGCTTCTGCAATT 58.279 37.500 26.36 0.00 36.82 2.32
3528 3918 6.164176 AGTACGTACTAAGCTTCTGCAATTT 58.836 36.000 26.36 0.00 36.82 1.82
3529 3919 5.283060 ACGTACTAAGCTTCTGCAATTTG 57.717 39.130 0.00 0.00 42.74 2.32
3530 3920 4.755123 ACGTACTAAGCTTCTGCAATTTGT 59.245 37.500 0.00 0.00 42.74 2.83
3531 3921 5.929992 ACGTACTAAGCTTCTGCAATTTGTA 59.070 36.000 0.00 0.00 42.74 2.41
3532 3922 6.594159 ACGTACTAAGCTTCTGCAATTTGTAT 59.406 34.615 0.00 0.00 42.74 2.29
3533 3923 7.119997 CGTACTAAGCTTCTGCAATTTGTATC 58.880 38.462 0.00 0.00 42.74 2.24
3534 3924 6.442513 ACTAAGCTTCTGCAATTTGTATCC 57.557 37.500 0.00 0.00 42.74 2.59
3535 3925 6.183347 ACTAAGCTTCTGCAATTTGTATCCT 58.817 36.000 0.00 0.00 42.74 3.24
3536 3926 5.990120 AAGCTTCTGCAATTTGTATCCTT 57.010 34.783 0.00 0.00 42.74 3.36
3537 3927 5.573337 AGCTTCTGCAATTTGTATCCTTC 57.427 39.130 0.00 0.00 42.74 3.46
3538 3928 5.012239 AGCTTCTGCAATTTGTATCCTTCA 58.988 37.500 0.00 0.00 42.74 3.02
3539 3929 5.655532 AGCTTCTGCAATTTGTATCCTTCAT 59.344 36.000 0.00 0.00 42.74 2.57
3540 3930 5.975939 GCTTCTGCAATTTGTATCCTTCATC 59.024 40.000 0.00 0.00 39.41 2.92
3541 3931 6.183360 GCTTCTGCAATTTGTATCCTTCATCT 60.183 38.462 0.00 0.00 39.41 2.90
3542 3932 7.012704 GCTTCTGCAATTTGTATCCTTCATCTA 59.987 37.037 0.00 0.00 39.41 1.98
3543 3933 8.442632 TTCTGCAATTTGTATCCTTCATCTAG 57.557 34.615 0.00 0.00 0.00 2.43
3544 3934 6.484643 TCTGCAATTTGTATCCTTCATCTAGC 59.515 38.462 0.00 0.00 0.00 3.42
3545 3935 5.237127 TGCAATTTGTATCCTTCATCTAGCG 59.763 40.000 0.00 0.00 0.00 4.26
3546 3936 5.466728 GCAATTTGTATCCTTCATCTAGCGA 59.533 40.000 0.00 0.00 0.00 4.93
3547 3937 6.347240 GCAATTTGTATCCTTCATCTAGCGAG 60.347 42.308 0.00 0.00 0.00 5.03
3548 3938 6.656632 ATTTGTATCCTTCATCTAGCGAGA 57.343 37.500 0.00 0.00 35.71 4.04
3549 3939 6.465439 TTTGTATCCTTCATCTAGCGAGAA 57.535 37.500 0.00 0.00 34.61 2.87
3550 3940 6.656632 TTGTATCCTTCATCTAGCGAGAAT 57.343 37.500 0.00 0.00 34.61 2.40
3551 3941 6.018589 TGTATCCTTCATCTAGCGAGAATG 57.981 41.667 0.00 0.68 34.61 2.67
3552 3942 4.533919 ATCCTTCATCTAGCGAGAATGG 57.466 45.455 0.00 1.49 34.61 3.16
3553 3943 2.036475 TCCTTCATCTAGCGAGAATGGC 59.964 50.000 0.00 0.00 41.64 4.40
3560 3950 4.521075 GCGAGAATGGCTGCACTA 57.479 55.556 0.50 0.00 36.65 2.74
3561 3951 2.997899 GCGAGAATGGCTGCACTAT 58.002 52.632 0.50 0.00 36.65 2.12
3562 3952 1.303309 GCGAGAATGGCTGCACTATT 58.697 50.000 0.50 0.00 36.65 1.73
3563 3953 1.672881 GCGAGAATGGCTGCACTATTT 59.327 47.619 0.50 0.00 36.65 1.40
3564 3954 2.098117 GCGAGAATGGCTGCACTATTTT 59.902 45.455 0.50 0.00 36.65 1.82
3565 3955 3.688272 CGAGAATGGCTGCACTATTTTG 58.312 45.455 0.50 0.00 28.03 2.44
3566 3956 3.127548 CGAGAATGGCTGCACTATTTTGT 59.872 43.478 0.50 0.00 28.03 2.83
3567 3957 4.332543 CGAGAATGGCTGCACTATTTTGTA 59.667 41.667 0.50 0.00 28.03 2.41
3568 3958 5.567138 AGAATGGCTGCACTATTTTGTAC 57.433 39.130 0.50 0.00 28.03 2.90
3569 3959 4.399303 AGAATGGCTGCACTATTTTGTACC 59.601 41.667 0.50 0.00 28.03 3.34
3570 3960 3.147553 TGGCTGCACTATTTTGTACCA 57.852 42.857 0.50 0.00 0.00 3.25
3588 3981 0.481567 CATCCAGCCATCTCCCCATT 59.518 55.000 0.00 0.00 0.00 3.16
3593 3986 3.152265 GCCATCTCCCCATTCCCCC 62.152 68.421 0.00 0.00 0.00 5.40
3594 3987 2.833913 CCATCTCCCCATTCCCCCG 61.834 68.421 0.00 0.00 0.00 5.73
3601 3994 4.060667 CCATTCCCCCGTGGCCTT 62.061 66.667 3.32 0.00 0.00 4.35
3603 3996 1.304952 CATTCCCCCGTGGCCTTTA 59.695 57.895 3.32 0.00 0.00 1.85
3607 4000 2.754375 CCCCGTGGCCTTTACTGT 59.246 61.111 3.32 0.00 0.00 3.55
3618 4011 0.881118 CTTTACTGTTGCCGCCATGT 59.119 50.000 0.00 0.00 0.00 3.21
3635 4028 1.141881 GTCCATCATCAGCCGACGT 59.858 57.895 0.00 0.00 0.00 4.34
3675 4095 4.947147 TGTCGTGGCCCCTGTTGC 62.947 66.667 0.00 0.00 0.00 4.17
3799 4552 3.071206 GCTCCTCTCTGTCCCGCA 61.071 66.667 0.00 0.00 0.00 5.69
3826 4579 2.147958 CGACGGAGGAAGGAGATAGAG 58.852 57.143 0.00 0.00 0.00 2.43
3888 4920 0.032678 CTCACTCGCACCTGACAAGT 59.967 55.000 0.00 0.00 0.00 3.16
3889 4921 1.269723 CTCACTCGCACCTGACAAGTA 59.730 52.381 0.00 0.00 0.00 2.24
3998 5101 3.269118 GGTATGGGTTTGTTTAGGGGGTA 59.731 47.826 0.00 0.00 0.00 3.69
4011 5114 3.808834 AGGGGGTAAAAGGAACAGAAG 57.191 47.619 0.00 0.00 0.00 2.85
4027 5355 3.970640 ACAGAAGAATAGATGAGGGGGTC 59.029 47.826 0.00 0.00 0.00 4.46
4070 5626 7.939784 ATTCAGGGTAGTAAAATGGACTTTC 57.060 36.000 0.00 0.00 0.00 2.62
4076 5632 8.225416 AGGGTAGTAAAATGGACTTTCTTCTTT 58.775 33.333 0.00 0.00 0.00 2.52
4077 5633 8.857098 GGGTAGTAAAATGGACTTTCTTCTTTT 58.143 33.333 0.00 0.00 0.00 2.27
4078 5634 9.678941 GGTAGTAAAATGGACTTTCTTCTTTTG 57.321 33.333 0.00 0.00 0.00 2.44
4098 5654 3.684693 AAAAACAGGCCACATGTGC 57.315 47.368 20.81 15.02 0.00 4.57
4104 5660 2.998097 GGCCACATGTGCCCTCTA 59.002 61.111 18.43 0.00 43.33 2.43
4105 5661 1.302949 GGCCACATGTGCCCTCTAA 59.697 57.895 18.43 0.00 43.33 2.10
4107 5663 1.544724 GCCACATGTGCCCTCTAAAA 58.455 50.000 20.81 0.00 0.00 1.52
4108 5664 2.102578 GCCACATGTGCCCTCTAAAAT 58.897 47.619 20.81 0.00 0.00 1.82
4109 5665 3.287222 GCCACATGTGCCCTCTAAAATA 58.713 45.455 20.81 0.00 0.00 1.40
4111 5667 4.022849 GCCACATGTGCCCTCTAAAATATC 60.023 45.833 20.81 0.00 0.00 1.63
4112 5668 5.132502 CCACATGTGCCCTCTAAAATATCA 58.867 41.667 20.81 0.00 0.00 2.15
4114 5670 6.460123 CCACATGTGCCCTCTAAAATATCAAC 60.460 42.308 20.81 0.00 0.00 3.18
4115 5671 6.319658 CACATGTGCCCTCTAAAATATCAACT 59.680 38.462 13.94 0.00 0.00 3.16
4116 5672 6.319658 ACATGTGCCCTCTAAAATATCAACTG 59.680 38.462 0.00 0.00 0.00 3.16
4117 5673 5.815581 TGTGCCCTCTAAAATATCAACTGT 58.184 37.500 0.00 0.00 0.00 3.55
4118 5674 5.647658 TGTGCCCTCTAAAATATCAACTGTG 59.352 40.000 0.00 0.00 0.00 3.66
4119 5675 5.066505 GTGCCCTCTAAAATATCAACTGTGG 59.933 44.000 0.00 0.00 0.00 4.17
4120 5676 5.193679 GCCCTCTAAAATATCAACTGTGGT 58.806 41.667 0.00 0.00 0.00 4.16
4121 5677 5.297029 GCCCTCTAAAATATCAACTGTGGTC 59.703 44.000 0.00 0.00 0.00 4.02
4123 5679 6.763610 CCCTCTAAAATATCAACTGTGGTCTC 59.236 42.308 0.00 0.00 0.00 3.36
4126 5682 9.743057 CTCTAAAATATCAACTGTGGTCTCTAG 57.257 37.037 0.00 0.00 0.00 2.43
4127 5683 9.256228 TCTAAAATATCAACTGTGGTCTCTAGT 57.744 33.333 0.00 0.00 0.00 2.57
4128 5684 9.877178 CTAAAATATCAACTGTGGTCTCTAGTT 57.123 33.333 0.00 0.00 35.18 2.24
4130 5686 8.553459 AAATATCAACTGTGGTCTCTAGTTTG 57.447 34.615 0.00 0.00 32.69 2.93
4131 5687 5.808366 ATCAACTGTGGTCTCTAGTTTGA 57.192 39.130 0.00 0.00 32.69 2.69
4132 5688 5.607939 TCAACTGTGGTCTCTAGTTTGAA 57.392 39.130 0.00 0.00 32.69 2.69
4133 5689 5.357257 TCAACTGTGGTCTCTAGTTTGAAC 58.643 41.667 0.00 0.00 32.69 3.18
4134 5690 3.978687 ACTGTGGTCTCTAGTTTGAACG 58.021 45.455 0.00 0.00 0.00 3.95
4135 5691 2.731976 CTGTGGTCTCTAGTTTGAACGC 59.268 50.000 0.00 0.00 0.00 4.84
4136 5692 2.101750 TGTGGTCTCTAGTTTGAACGCA 59.898 45.455 9.21 9.21 37.96 5.24
4137 5693 3.128349 GTGGTCTCTAGTTTGAACGCAA 58.872 45.455 6.79 0.00 31.43 4.85
4138 5694 3.746492 GTGGTCTCTAGTTTGAACGCAAT 59.254 43.478 6.79 0.00 33.25 3.56
4141 5697 5.992829 TGGTCTCTAGTTTGAACGCAATAAA 59.007 36.000 0.00 0.00 33.25 1.40
4144 5700 8.021396 GGTCTCTAGTTTGAACGCAATAAATTT 58.979 33.333 0.00 0.00 33.25 1.82
4146 5702 9.607285 TCTCTAGTTTGAACGCAATAAATTTTC 57.393 29.630 0.00 0.00 33.25 2.29
4147 5703 9.393249 CTCTAGTTTGAACGCAATAAATTTTCA 57.607 29.630 0.00 0.00 33.25 2.69
4148 5704 9.176181 TCTAGTTTGAACGCAATAAATTTTCAC 57.824 29.630 0.00 0.00 33.25 3.18
4149 5705 9.180678 CTAGTTTGAACGCAATAAATTTTCACT 57.819 29.630 0.00 0.00 33.25 3.41
4150 5706 8.419076 AGTTTGAACGCAATAAATTTTCACTT 57.581 26.923 0.00 0.00 33.25 3.16
4153 5709 7.993821 TGAACGCAATAAATTTTCACTTCAA 57.006 28.000 0.00 0.00 0.00 2.69
4154 5710 8.586570 TGAACGCAATAAATTTTCACTTCAAT 57.413 26.923 0.00 0.00 0.00 2.57
4155 5711 9.039870 TGAACGCAATAAATTTTCACTTCAATT 57.960 25.926 0.00 0.00 0.00 2.32
4156 5712 9.862585 GAACGCAATAAATTTTCACTTCAATTT 57.137 25.926 0.00 0.00 36.69 1.82
4157 5713 9.862585 AACGCAATAAATTTTCACTTCAATTTC 57.137 25.926 0.00 0.00 34.94 2.17
4159 5715 9.305110 CGCAATAAATTTTCACTTCAATTTCAC 57.695 29.630 0.00 0.00 34.94 3.18
4168 5724 7.730364 TTCACTTCAATTTCACTTCTACTCC 57.270 36.000 0.00 0.00 0.00 3.85
4169 5725 7.067496 TCACTTCAATTTCACTTCTACTCCT 57.933 36.000 0.00 0.00 0.00 3.69
4170 5726 7.155328 TCACTTCAATTTCACTTCTACTCCTC 58.845 38.462 0.00 0.00 0.00 3.71
4171 5727 6.370166 CACTTCAATTTCACTTCTACTCCTCC 59.630 42.308 0.00 0.00 0.00 4.30
4172 5728 5.422214 TCAATTTCACTTCTACTCCTCCC 57.578 43.478 0.00 0.00 0.00 4.30
4174 5730 5.548056 TCAATTTCACTTCTACTCCTCCCTT 59.452 40.000 0.00 0.00 0.00 3.95
4175 5731 6.729100 TCAATTTCACTTCTACTCCTCCCTTA 59.271 38.462 0.00 0.00 0.00 2.69
4176 5732 5.997384 TTTCACTTCTACTCCTCCCTTAC 57.003 43.478 0.00 0.00 0.00 2.34
4178 5734 4.601084 TCACTTCTACTCCTCCCTTACAG 58.399 47.826 0.00 0.00 0.00 2.74
4179 5735 3.702045 CACTTCTACTCCTCCCTTACAGG 59.298 52.174 0.00 0.00 34.30 4.00
4180 5736 3.337301 ACTTCTACTCCTCCCTTACAGGT 59.663 47.826 0.00 0.00 31.93 4.00
4181 5737 3.383698 TCTACTCCTCCCTTACAGGTG 57.616 52.381 0.00 0.00 31.93 4.00
4182 5738 2.024273 TCTACTCCTCCCTTACAGGTGG 60.024 54.545 0.00 0.00 41.19 4.61
4183 5739 0.790993 ACTCCTCCCTTACAGGTGGA 59.209 55.000 1.72 1.72 45.25 4.02
4184 5740 3.711849 TCCTCCCTTACAGGTGGAG 57.288 57.895 0.00 0.00 43.15 3.86
4185 5741 0.617820 TCCTCCCTTACAGGTGGAGC 60.618 60.000 0.00 0.00 43.15 4.70
4186 5742 1.627297 CCTCCCTTACAGGTGGAGCC 61.627 65.000 0.00 0.00 43.56 4.70
4187 5743 1.615424 TCCCTTACAGGTGGAGCCC 60.615 63.158 0.00 0.00 38.26 5.19
4188 5744 1.923395 CCCTTACAGGTGGAGCCCA 60.923 63.158 0.00 0.00 38.26 5.36
4203 5759 4.636435 CCACCCGGAGCCACGTTT 62.636 66.667 0.73 0.00 0.00 3.60
4204 5760 3.353836 CACCCGGAGCCACGTTTG 61.354 66.667 0.73 0.00 0.00 2.93
4207 5763 3.283684 CCGGAGCCACGTTTGCAA 61.284 61.111 0.00 0.00 0.00 4.08
4208 5764 2.625823 CCGGAGCCACGTTTGCAAT 61.626 57.895 0.00 0.00 0.00 3.56
4210 5766 1.003262 CGGAGCCACGTTTGCAATTG 61.003 55.000 0.00 0.00 0.00 2.32
4211 5767 0.313672 GGAGCCACGTTTGCAATTGA 59.686 50.000 10.34 0.00 0.00 2.57
4212 5768 1.269517 GGAGCCACGTTTGCAATTGAA 60.270 47.619 10.34 0.00 0.00 2.69
4215 5771 3.465871 AGCCACGTTTGCAATTGAAATT 58.534 36.364 10.34 0.00 0.00 1.82
4216 5772 4.626042 AGCCACGTTTGCAATTGAAATTA 58.374 34.783 10.34 0.00 0.00 1.40
4217 5773 4.447389 AGCCACGTTTGCAATTGAAATTAC 59.553 37.500 10.34 0.00 0.00 1.89
4219 5775 5.631512 GCCACGTTTGCAATTGAAATTACTA 59.368 36.000 10.34 0.00 0.00 1.82
4220 5776 6.399564 GCCACGTTTGCAATTGAAATTACTAC 60.400 38.462 10.34 0.00 0.00 2.73
4221 5777 6.861055 CCACGTTTGCAATTGAAATTACTACT 59.139 34.615 10.34 0.00 0.00 2.57
4222 5778 7.060633 CCACGTTTGCAATTGAAATTACTACTC 59.939 37.037 10.34 0.00 0.00 2.59
4223 5779 6.795114 ACGTTTGCAATTGAAATTACTACTCG 59.205 34.615 10.34 6.84 0.00 4.18
4224 5780 6.795114 CGTTTGCAATTGAAATTACTACTCGT 59.205 34.615 10.34 0.00 0.00 4.18
4225 5781 7.322699 CGTTTGCAATTGAAATTACTACTCGTT 59.677 33.333 10.34 0.00 0.00 3.85
4226 5782 8.964150 GTTTGCAATTGAAATTACTACTCGTTT 58.036 29.630 10.34 0.00 0.00 3.60
4227 5783 8.500837 TTGCAATTGAAATTACTACTCGTTTG 57.499 30.769 10.34 0.00 0.00 2.93
4228 5784 7.644490 TGCAATTGAAATTACTACTCGTTTGT 58.356 30.769 10.34 0.00 0.00 2.83
4231 5787 6.854496 TTGAAATTACTACTCGTTTGTGCT 57.146 33.333 0.00 0.00 0.00 4.40
4232 5788 6.854496 TGAAATTACTACTCGTTTGTGCTT 57.146 33.333 0.00 0.00 0.00 3.91
4234 5790 7.699566 TGAAATTACTACTCGTTTGTGCTTTT 58.300 30.769 0.00 0.00 0.00 2.27
4236 5792 9.654417 GAAATTACTACTCGTTTGTGCTTTTTA 57.346 29.630 0.00 0.00 0.00 1.52
4239 5795 8.996988 TTACTACTCGTTTGTGCTTTTTATTG 57.003 30.769 0.00 0.00 0.00 1.90
4241 5797 7.130269 ACTACTCGTTTGTGCTTTTTATTGAC 58.870 34.615 0.00 0.00 0.00 3.18
4242 5798 5.885881 ACTCGTTTGTGCTTTTTATTGACA 58.114 33.333 0.00 0.00 0.00 3.58
4244 5800 5.885881 TCGTTTGTGCTTTTTATTGACAGT 58.114 33.333 0.00 0.00 0.00 3.55
4245 5801 5.741510 TCGTTTGTGCTTTTTATTGACAGTG 59.258 36.000 0.00 0.00 0.00 3.66
4246 5802 5.514914 CGTTTGTGCTTTTTATTGACAGTGT 59.485 36.000 0.00 0.00 0.00 3.55
4247 5803 6.506200 CGTTTGTGCTTTTTATTGACAGTGTG 60.506 38.462 0.00 0.00 0.00 3.82
4248 5804 5.826601 TGTGCTTTTTATTGACAGTGTGA 57.173 34.783 0.00 0.00 0.00 3.58
4249 5805 5.820131 TGTGCTTTTTATTGACAGTGTGAG 58.180 37.500 0.00 0.00 0.00 3.51
4250 5806 4.676924 GTGCTTTTTATTGACAGTGTGAGC 59.323 41.667 0.00 0.00 0.00 4.26
4251 5807 4.229876 GCTTTTTATTGACAGTGTGAGCC 58.770 43.478 0.00 0.00 0.00 4.70
4252 5808 4.261572 GCTTTTTATTGACAGTGTGAGCCA 60.262 41.667 0.00 0.00 0.00 4.75
4253 5809 4.829064 TTTTATTGACAGTGTGAGCCAC 57.171 40.909 0.00 0.00 44.89 5.01
4264 5820 2.669569 GAGCCACACATGCCACGT 60.670 61.111 0.00 0.00 0.00 4.49
4265 5821 1.375396 GAGCCACACATGCCACGTA 60.375 57.895 0.00 0.00 0.00 3.57
4266 5822 1.361668 GAGCCACACATGCCACGTAG 61.362 60.000 0.00 0.00 0.00 3.51
4267 5823 2.398554 GCCACACATGCCACGTAGG 61.399 63.158 0.00 0.00 41.84 3.18
4271 5827 0.535335 ACACATGCCACGTAGGTAGG 59.465 55.000 0.00 5.54 39.86 3.18
4272 5828 0.179084 CACATGCCACGTAGGTAGGG 60.179 60.000 10.32 0.00 38.17 3.53
4273 5829 1.227556 CATGCCACGTAGGTAGGGC 60.228 63.158 9.38 9.38 46.58 5.19
4275 5831 2.499685 GCCACGTAGGTAGGGCAG 59.500 66.667 11.01 0.00 45.70 4.85
4276 5832 2.056223 GCCACGTAGGTAGGGCAGA 61.056 63.158 11.01 0.00 45.70 4.26
4277 5833 1.814527 CCACGTAGGTAGGGCAGAC 59.185 63.158 0.00 0.00 0.00 3.51
4279 5835 1.028330 CACGTAGGTAGGGCAGACGA 61.028 60.000 0.00 0.00 37.00 4.20
4280 5836 1.028868 ACGTAGGTAGGGCAGACGAC 61.029 60.000 0.00 0.00 37.00 4.34
4281 5837 1.028330 CGTAGGTAGGGCAGACGACA 61.028 60.000 0.00 0.00 35.59 4.35
4282 5838 1.180029 GTAGGTAGGGCAGACGACAA 58.820 55.000 0.00 0.00 0.00 3.18
4283 5839 1.755380 GTAGGTAGGGCAGACGACAAT 59.245 52.381 0.00 0.00 0.00 2.71
4285 5841 2.463752 AGGTAGGGCAGACGACAATAA 58.536 47.619 0.00 0.00 0.00 1.40
4286 5842 2.835764 AGGTAGGGCAGACGACAATAAA 59.164 45.455 0.00 0.00 0.00 1.40
4288 5844 3.369157 GGTAGGGCAGACGACAATAAACT 60.369 47.826 0.00 0.00 0.00 2.66
4289 5845 3.418684 AGGGCAGACGACAATAAACTT 57.581 42.857 0.00 0.00 0.00 2.66
4290 5846 4.546829 AGGGCAGACGACAATAAACTTA 57.453 40.909 0.00 0.00 0.00 2.24
4291 5847 4.504858 AGGGCAGACGACAATAAACTTAG 58.495 43.478 0.00 0.00 0.00 2.18
4292 5848 4.222145 AGGGCAGACGACAATAAACTTAGA 59.778 41.667 0.00 0.00 0.00 2.10
4293 5849 5.104900 AGGGCAGACGACAATAAACTTAGAT 60.105 40.000 0.00 0.00 0.00 1.98
4294 5850 6.097839 AGGGCAGACGACAATAAACTTAGATA 59.902 38.462 0.00 0.00 0.00 1.98
4295 5851 6.200475 GGGCAGACGACAATAAACTTAGATAC 59.800 42.308 0.00 0.00 0.00 2.24
4296 5852 6.074994 GGCAGACGACAATAAACTTAGATACG 60.075 42.308 0.00 0.00 0.00 3.06
4297 5853 6.074994 GCAGACGACAATAAACTTAGATACGG 60.075 42.308 0.00 0.00 0.00 4.02
4298 5854 6.971184 CAGACGACAATAAACTTAGATACGGT 59.029 38.462 0.00 0.00 0.00 4.83
4299 5855 6.971184 AGACGACAATAAACTTAGATACGGTG 59.029 38.462 0.00 0.00 0.00 4.94
4302 5858 5.736813 ACAATAAACTTAGATACGGTGCCA 58.263 37.500 0.00 0.00 0.00 4.92
4304 5860 6.260050 ACAATAAACTTAGATACGGTGCCATG 59.740 38.462 0.00 0.00 0.00 3.66
4306 5862 3.454371 ACTTAGATACGGTGCCATGTC 57.546 47.619 0.00 0.00 0.00 3.06
4308 5864 3.181475 ACTTAGATACGGTGCCATGTCAG 60.181 47.826 0.00 0.00 0.00 3.51
4309 5865 0.179073 AGATACGGTGCCATGTCAGC 60.179 55.000 0.00 0.00 0.00 4.26
4310 5866 0.461870 GATACGGTGCCATGTCAGCA 60.462 55.000 6.75 0.00 38.08 4.41
4311 5867 0.462581 ATACGGTGCCATGTCAGCAG 60.463 55.000 6.75 1.93 41.87 4.24
4312 5868 1.540435 TACGGTGCCATGTCAGCAGA 61.540 55.000 6.75 0.00 41.87 4.26
4313 5869 2.104859 CGGTGCCATGTCAGCAGAG 61.105 63.158 6.75 0.00 41.87 3.35
4314 5870 1.002868 GGTGCCATGTCAGCAGAGT 60.003 57.895 0.22 0.00 41.87 3.24
4317 5873 2.426522 GTGCCATGTCAGCAGAGTTAA 58.573 47.619 0.00 0.00 41.87 2.01
4318 5874 2.160417 GTGCCATGTCAGCAGAGTTAAC 59.840 50.000 0.00 0.00 41.87 2.01
4319 5875 1.394917 GCCATGTCAGCAGAGTTAACG 59.605 52.381 0.00 0.00 0.00 3.18
4321 5877 2.668457 CCATGTCAGCAGAGTTAACGTC 59.332 50.000 0.00 0.00 0.00 4.34
4323 5879 3.728076 TGTCAGCAGAGTTAACGTCTT 57.272 42.857 0.00 0.00 0.00 3.01
4325 5881 3.802139 TGTCAGCAGAGTTAACGTCTTTG 59.198 43.478 0.00 5.37 0.00 2.77
4326 5882 3.184581 GTCAGCAGAGTTAACGTCTTTGG 59.815 47.826 0.00 0.00 0.00 3.28
4327 5883 3.069016 TCAGCAGAGTTAACGTCTTTGGA 59.931 43.478 0.00 0.00 0.00 3.53
4330 5886 3.558418 GCAGAGTTAACGTCTTTGGACAA 59.442 43.478 0.00 0.00 42.21 3.18
4331 5887 4.552184 GCAGAGTTAACGTCTTTGGACAAC 60.552 45.833 0.00 0.00 42.21 3.32
4332 5888 3.800506 AGAGTTAACGTCTTTGGACAACG 59.199 43.478 0.00 0.00 42.21 4.10
4334 5890 3.800506 AGTTAACGTCTTTGGACAACGAG 59.199 43.478 0.00 0.00 42.21 4.18
4335 5891 1.578583 AACGTCTTTGGACAACGAGG 58.421 50.000 8.93 8.93 42.21 4.63
4337 5893 0.249741 CGTCTTTGGACAACGAGGGT 60.250 55.000 0.00 0.00 42.21 4.34
4338 5894 1.000060 CGTCTTTGGACAACGAGGGTA 60.000 52.381 0.00 0.00 42.21 3.69
4340 5896 2.040939 TCTTTGGACAACGAGGGTACA 58.959 47.619 0.00 0.00 0.00 2.90
4342 5898 1.121378 TTGGACAACGAGGGTACACA 58.879 50.000 0.00 0.00 0.00 3.72
4344 5900 1.202557 TGGACAACGAGGGTACACAAC 60.203 52.381 0.00 0.00 0.00 3.32
4345 5901 1.202557 GGACAACGAGGGTACACAACA 60.203 52.381 0.00 0.00 0.00 3.33
4346 5902 1.862827 GACAACGAGGGTACACAACAC 59.137 52.381 0.00 0.00 0.00 3.32
4347 5903 1.207570 ACAACGAGGGTACACAACACA 59.792 47.619 0.00 0.00 31.97 3.72
4349 5905 2.875933 CAACGAGGGTACACAACACATT 59.124 45.455 0.00 0.00 31.97 2.71
4350 5906 4.059511 CAACGAGGGTACACAACACATTA 58.940 43.478 0.00 0.00 31.97 1.90
4354 6196 4.382291 GAGGGTACACAACACATTACACA 58.618 43.478 0.00 0.00 31.97 3.72
4356 6198 4.759693 AGGGTACACAACACATTACACATG 59.240 41.667 0.00 0.00 31.97 3.21
4360 6202 7.197017 GGTACACAACACATTACACATGAAAA 58.803 34.615 0.00 0.00 0.00 2.29
4365 6207 6.756074 ACAACACATTACACATGAAAACCAAG 59.244 34.615 0.00 0.00 0.00 3.61
4366 6208 6.463995 ACACATTACACATGAAAACCAAGT 57.536 33.333 0.00 0.00 0.00 3.16
4367 6209 6.872920 ACACATTACACATGAAAACCAAGTT 58.127 32.000 0.00 0.00 0.00 2.66
4370 6212 8.115520 CACATTACACATGAAAACCAAGTTTTG 58.884 33.333 10.00 0.28 44.33 2.44
4371 6213 8.037758 ACATTACACATGAAAACCAAGTTTTGA 58.962 29.630 10.00 2.52 44.33 2.69
4402 6244 9.243637 TGTTCTTTGTATTTTACAATTGTGAGC 57.756 29.630 21.42 8.01 46.89 4.26
4403 6245 9.243637 GTTCTTTGTATTTTACAATTGTGAGCA 57.756 29.630 21.42 8.34 46.89 4.26
4404 6246 8.795786 TCTTTGTATTTTACAATTGTGAGCAC 57.204 30.769 21.42 12.06 46.89 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.717580 TGTCATTAGCACGACGACTT 57.282 45.000 0.00 0.00 34.78 3.01
2 3 2.941453 ATGTCATTAGCACGACGACT 57.059 45.000 0.00 0.59 34.78 4.18
3 4 3.431856 TGTATGTCATTAGCACGACGAC 58.568 45.455 0.00 0.00 34.78 4.34
4 5 3.768468 TGTATGTCATTAGCACGACGA 57.232 42.857 0.00 0.00 34.78 4.20
5 6 4.027621 GTCTTGTATGTCATTAGCACGACG 60.028 45.833 0.00 0.00 34.78 5.12
6 7 4.862574 TGTCTTGTATGTCATTAGCACGAC 59.137 41.667 0.00 11.15 0.00 4.34
7 8 5.066968 TGTCTTGTATGTCATTAGCACGA 57.933 39.130 0.00 0.00 0.00 4.35
8 9 5.576774 TCTTGTCTTGTATGTCATTAGCACG 59.423 40.000 0.00 0.00 0.00 5.34
9 10 6.368791 TGTCTTGTCTTGTATGTCATTAGCAC 59.631 38.462 0.00 0.00 0.00 4.40
10 11 6.368791 GTGTCTTGTCTTGTATGTCATTAGCA 59.631 38.462 0.00 0.00 0.00 3.49
11 12 6.591834 AGTGTCTTGTCTTGTATGTCATTAGC 59.408 38.462 0.00 0.00 0.00 3.09
12 13 9.295214 CTAGTGTCTTGTCTTGTATGTCATTAG 57.705 37.037 0.00 0.00 0.00 1.73
13 14 9.020731 TCTAGTGTCTTGTCTTGTATGTCATTA 57.979 33.333 0.00 0.00 0.00 1.90
14 15 7.896811 TCTAGTGTCTTGTCTTGTATGTCATT 58.103 34.615 0.00 0.00 0.00 2.57
15 16 7.468141 TCTAGTGTCTTGTCTTGTATGTCAT 57.532 36.000 0.00 0.00 0.00 3.06
16 17 6.894339 TCTAGTGTCTTGTCTTGTATGTCA 57.106 37.500 0.00 0.00 0.00 3.58
17 18 7.145985 TGTTCTAGTGTCTTGTCTTGTATGTC 58.854 38.462 0.00 0.00 0.00 3.06
18 19 7.050970 TGTTCTAGTGTCTTGTCTTGTATGT 57.949 36.000 0.00 0.00 0.00 2.29
19 20 7.946655 TTGTTCTAGTGTCTTGTCTTGTATG 57.053 36.000 0.00 0.00 0.00 2.39
22 23 9.209175 GATTATTGTTCTAGTGTCTTGTCTTGT 57.791 33.333 0.00 0.00 0.00 3.16
23 24 8.376203 CGATTATTGTTCTAGTGTCTTGTCTTG 58.624 37.037 0.00 0.00 0.00 3.02
24 25 8.088981 ACGATTATTGTTCTAGTGTCTTGTCTT 58.911 33.333 0.00 0.00 0.00 3.01
25 26 7.603651 ACGATTATTGTTCTAGTGTCTTGTCT 58.396 34.615 0.00 0.00 0.00 3.41
26 27 7.253354 CGACGATTATTGTTCTAGTGTCTTGTC 60.253 40.741 0.00 0.00 0.00 3.18
27 28 6.527023 CGACGATTATTGTTCTAGTGTCTTGT 59.473 38.462 0.00 0.00 0.00 3.16
28 29 6.506513 GCGACGATTATTGTTCTAGTGTCTTG 60.507 42.308 0.00 0.00 0.00 3.02
29 30 5.515626 GCGACGATTATTGTTCTAGTGTCTT 59.484 40.000 0.00 0.00 0.00 3.01
30 31 5.035443 GCGACGATTATTGTTCTAGTGTCT 58.965 41.667 0.00 0.00 0.00 3.41
31 32 4.206609 GGCGACGATTATTGTTCTAGTGTC 59.793 45.833 0.00 0.00 0.00 3.67
32 33 4.110482 GGCGACGATTATTGTTCTAGTGT 58.890 43.478 0.00 0.00 0.00 3.55
33 34 4.694012 GGCGACGATTATTGTTCTAGTG 57.306 45.455 0.00 0.00 0.00 2.74
49 50 1.124462 CGATTCTCTTCATCGGCGAC 58.876 55.000 13.76 0.00 39.94 5.19
50 51 0.738975 ACGATTCTCTTCATCGGCGA 59.261 50.000 13.87 13.87 46.44 5.54
51 52 2.031944 TCTACGATTCTCTTCATCGGCG 60.032 50.000 0.00 0.00 46.44 6.46
52 53 3.301706 GTCTACGATTCTCTTCATCGGC 58.698 50.000 7.20 0.00 46.44 5.54
53 54 3.304794 GGGTCTACGATTCTCTTCATCGG 60.305 52.174 7.20 0.00 46.44 4.18
55 56 4.920640 TGGGTCTACGATTCTCTTCATC 57.079 45.455 0.00 0.00 0.00 2.92
56 57 5.422331 TCTTTGGGTCTACGATTCTCTTCAT 59.578 40.000 0.00 0.00 0.00 2.57
57 58 4.770531 TCTTTGGGTCTACGATTCTCTTCA 59.229 41.667 0.00 0.00 0.00 3.02
58 59 5.326200 TCTTTGGGTCTACGATTCTCTTC 57.674 43.478 0.00 0.00 0.00 2.87
59 60 5.740290 TTCTTTGGGTCTACGATTCTCTT 57.260 39.130 0.00 0.00 0.00 2.85
60 61 5.163395 GGATTCTTTGGGTCTACGATTCTCT 60.163 44.000 0.00 0.00 0.00 3.10
61 62 5.051153 GGATTCTTTGGGTCTACGATTCTC 58.949 45.833 0.00 0.00 0.00 2.87
62 63 4.469945 TGGATTCTTTGGGTCTACGATTCT 59.530 41.667 0.00 0.00 0.00 2.40
63 64 4.766375 TGGATTCTTTGGGTCTACGATTC 58.234 43.478 0.00 0.00 0.00 2.52
64 65 4.837093 TGGATTCTTTGGGTCTACGATT 57.163 40.909 0.00 0.00 0.00 3.34
65 66 4.514401 GTTGGATTCTTTGGGTCTACGAT 58.486 43.478 0.00 0.00 0.00 3.73
66 67 3.307199 GGTTGGATTCTTTGGGTCTACGA 60.307 47.826 0.00 0.00 0.00 3.43
67 68 3.007635 GGTTGGATTCTTTGGGTCTACG 58.992 50.000 0.00 0.00 0.00 3.51
68 69 4.010349 CAGGTTGGATTCTTTGGGTCTAC 58.990 47.826 0.00 0.00 0.00 2.59
69 70 3.655777 ACAGGTTGGATTCTTTGGGTCTA 59.344 43.478 0.00 0.00 0.00 2.59
70 71 2.447047 ACAGGTTGGATTCTTTGGGTCT 59.553 45.455 0.00 0.00 0.00 3.85
71 72 2.876581 ACAGGTTGGATTCTTTGGGTC 58.123 47.619 0.00 0.00 0.00 4.46
72 73 3.655777 TCTACAGGTTGGATTCTTTGGGT 59.344 43.478 0.00 0.00 0.00 4.51
73 74 4.010349 GTCTACAGGTTGGATTCTTTGGG 58.990 47.826 0.00 0.00 0.00 4.12
74 75 4.455877 GTGTCTACAGGTTGGATTCTTTGG 59.544 45.833 0.00 0.00 0.00 3.28
75 76 5.049405 GTGTGTCTACAGGTTGGATTCTTTG 60.049 44.000 0.00 0.00 37.52 2.77
76 77 5.063880 GTGTGTCTACAGGTTGGATTCTTT 58.936 41.667 0.00 0.00 37.52 2.52
77 78 4.642429 GTGTGTCTACAGGTTGGATTCTT 58.358 43.478 0.00 0.00 37.52 2.52
96 97 4.801330 TCATCTGTGTTCCTATTCGTGT 57.199 40.909 0.00 0.00 0.00 4.49
97 98 4.929211 TGTTCATCTGTGTTCCTATTCGTG 59.071 41.667 0.00 0.00 0.00 4.35
98 99 5.147330 TGTTCATCTGTGTTCCTATTCGT 57.853 39.130 0.00 0.00 0.00 3.85
99 100 6.368791 TCTTTGTTCATCTGTGTTCCTATTCG 59.631 38.462 0.00 0.00 0.00 3.34
100 101 7.672983 TCTTTGTTCATCTGTGTTCCTATTC 57.327 36.000 0.00 0.00 0.00 1.75
102 103 6.536582 CGATCTTTGTTCATCTGTGTTCCTAT 59.463 38.462 0.00 0.00 0.00 2.57
103 104 5.869344 CGATCTTTGTTCATCTGTGTTCCTA 59.131 40.000 0.00 0.00 0.00 2.94
104 105 4.692625 CGATCTTTGTTCATCTGTGTTCCT 59.307 41.667 0.00 0.00 0.00 3.36
105 106 4.690748 TCGATCTTTGTTCATCTGTGTTCC 59.309 41.667 0.00 0.00 0.00 3.62
106 107 5.845985 TCGATCTTTGTTCATCTGTGTTC 57.154 39.130 0.00 0.00 0.00 3.18
108 109 6.169094 AGATTCGATCTTTGTTCATCTGTGT 58.831 36.000 0.00 0.00 35.76 3.72
109 110 6.659361 AGATTCGATCTTTGTTCATCTGTG 57.341 37.500 0.00 0.00 35.76 3.66
110 111 7.984050 ACATAGATTCGATCTTTGTTCATCTGT 59.016 33.333 11.94 0.37 45.25 3.41
111 112 8.274248 CACATAGATTCGATCTTTGTTCATCTG 58.726 37.037 13.82 4.18 45.25 2.90
112 113 7.440556 CCACATAGATTCGATCTTTGTTCATCT 59.559 37.037 13.82 6.86 45.25 2.90
113 114 7.439356 TCCACATAGATTCGATCTTTGTTCATC 59.561 37.037 13.82 0.68 45.25 2.92
114 115 7.275183 TCCACATAGATTCGATCTTTGTTCAT 58.725 34.615 13.82 0.00 45.25 2.57
115 116 6.639563 TCCACATAGATTCGATCTTTGTTCA 58.360 36.000 13.82 5.71 45.25 3.18
116 117 7.095439 GGATCCACATAGATTCGATCTTTGTTC 60.095 40.741 6.95 10.88 45.25 3.18
119 120 6.146837 GTGGATCCACATAGATTCGATCTTTG 59.853 42.308 35.21 11.06 45.53 2.77
120 121 6.226787 GTGGATCCACATAGATTCGATCTTT 58.773 40.000 35.21 0.00 45.53 2.52
132 133 8.875132 AACATTTGTTTTCGGTGGATCCACATA 61.875 37.037 38.83 26.18 40.90 2.29
134 135 6.903977 AACATTTGTTTTCGGTGGATCCACA 61.904 40.000 38.83 22.04 40.90 4.17
146 147 3.431912 GGATTCGGCCAACATTTGTTTTC 59.568 43.478 2.24 0.00 35.83 2.29
155 156 3.851897 TTGCGGGATTCGGCCAACA 62.852 57.895 2.24 0.00 38.29 3.33
158 159 2.940890 GATCTTGCGGGATTCGGCCA 62.941 60.000 2.24 0.00 38.29 5.36
170 171 2.586357 GTCTCCGGCGGATCTTGC 60.586 66.667 31.23 13.71 0.00 4.01
204 205 1.204941 GGTGCTTCTAGTGTCATCGGT 59.795 52.381 0.00 0.00 0.00 4.69
228 229 0.972983 CCCGACCCAGTCTCTGTCAT 60.973 60.000 0.00 0.00 0.00 3.06
242 243 4.409187 AGATAGAATAAGGTCCTCCCGAC 58.591 47.826 0.00 0.00 41.15 4.79
243 244 4.743705 AGATAGAATAAGGTCCTCCCGA 57.256 45.455 0.00 0.00 38.74 5.14
246 247 7.007723 TCTCTGAAGATAGAATAAGGTCCTCC 58.992 42.308 0.00 0.00 0.00 4.30
250 251 6.378582 CGCTCTCTGAAGATAGAATAAGGTC 58.621 44.000 0.00 0.00 0.00 3.85
274 275 0.107165 AAATAGGAGAGGCGGCAACC 60.107 55.000 13.08 11.31 0.00 3.77
277 278 1.048601 CCTAAATAGGAGAGGCGGCA 58.951 55.000 13.08 0.00 46.63 5.69
290 291 7.514721 TGTTAGAGTTTGTGTCCTTCCTAAAT 58.485 34.615 0.00 0.00 0.00 1.40
294 295 5.367945 TTGTTAGAGTTTGTGTCCTTCCT 57.632 39.130 0.00 0.00 0.00 3.36
411 415 2.280592 GTTTCGTGTGCCTCCCGT 60.281 61.111 0.00 0.00 0.00 5.28
423 427 3.814268 CCAGCGGCCATGGTTTCG 61.814 66.667 14.67 15.62 32.85 3.46
430 434 2.448542 AGGATACCCAGCGGCCAT 60.449 61.111 2.24 0.00 33.88 4.40
433 437 1.119574 TAAGGAGGATACCCAGCGGC 61.120 60.000 0.00 0.00 33.88 6.53
436 440 1.614413 CTCGTAAGGAGGATACCCAGC 59.386 57.143 0.00 0.00 39.22 4.85
437 441 1.614413 GCTCGTAAGGAGGATACCCAG 59.386 57.143 0.00 0.00 43.36 4.45
443 447 1.606903 CCTACGCTCGTAAGGAGGAT 58.393 55.000 3.66 0.00 43.36 3.24
482 486 3.183754 TGCGTGGATAGTTGAATACGTG 58.816 45.455 0.00 0.00 34.37 4.49
501 505 8.767478 ATCTTATAGCATTAAAAATGGCATGC 57.233 30.769 9.90 9.90 42.05 4.06
527 531 3.942748 GTCCGCAATTAAACATCCTACCA 59.057 43.478 0.00 0.00 0.00 3.25
529 533 6.913873 TTAGTCCGCAATTAAACATCCTAC 57.086 37.500 0.00 0.00 0.00 3.18
530 534 7.925043 TTTTAGTCCGCAATTAAACATCCTA 57.075 32.000 0.00 0.00 0.00 2.94
685 698 9.312904 AAAGAATTTGTGAGGAATTTGATCCTA 57.687 29.630 0.00 0.00 43.35 2.94
695 708 4.909696 TTGCGAAAGAATTTGTGAGGAA 57.090 36.364 0.00 0.00 39.27 3.36
701 714 6.205784 TCGAAGAATTTGCGAAAGAATTTGT 58.794 32.000 0.00 0.00 39.27 2.83
709 722 6.434596 TCTTTGATTCGAAGAATTTGCGAAA 58.565 32.000 13.01 0.00 45.54 3.46
712 725 6.859715 ATTCTTTGATTCGAAGAATTTGCG 57.140 33.333 26.25 0.00 46.43 4.85
768 797 7.230747 CCATGTCCCAATTATGGTCACTATTA 58.769 38.462 0.00 0.00 46.01 0.98
769 798 6.070656 CCATGTCCCAATTATGGTCACTATT 58.929 40.000 0.00 0.00 46.01 1.73
770 799 5.634118 CCATGTCCCAATTATGGTCACTAT 58.366 41.667 0.00 0.00 46.01 2.12
771 800 5.047566 CCATGTCCCAATTATGGTCACTA 57.952 43.478 0.00 0.00 46.01 2.74
873 910 2.499205 CAATCGCACGGCTAGGGA 59.501 61.111 0.00 0.00 0.00 4.20
902 939 1.314730 GGAGAAACGCCCTTTTGTGA 58.685 50.000 0.00 0.00 0.00 3.58
914 951 3.322828 GGGGGTTAAGGTTTTGGAGAAAC 59.677 47.826 0.00 0.00 0.00 2.78
915 952 3.578978 GGGGGTTAAGGTTTTGGAGAAA 58.421 45.455 0.00 0.00 0.00 2.52
916 953 2.489437 CGGGGGTTAAGGTTTTGGAGAA 60.489 50.000 0.00 0.00 0.00 2.87
1035 1072 1.986575 GCCTGTGCTTCCGCTTGATC 61.987 60.000 0.00 0.00 36.97 2.92
1584 1621 1.745489 GTCAATGGTGTCCCGCTCC 60.745 63.158 0.00 0.00 0.00 4.70
1641 1678 1.079127 CCAATTCGGCTCCTCGTGT 60.079 57.895 0.00 0.00 0.00 4.49
1656 1693 4.577677 TCAAGCAGCACCGGCCAA 62.578 61.111 0.00 0.00 42.56 4.52
1719 1756 4.141756 CCAGCTGAGACTTCCAACAGATAT 60.142 45.833 17.39 0.00 32.90 1.63
1726 1763 0.473755 TTGCCAGCTGAGACTTCCAA 59.526 50.000 17.39 3.90 0.00 3.53
1825 1862 2.060326 TTCGCGTCAAAGAGGTACAG 57.940 50.000 5.77 0.00 0.00 2.74
1980 2017 3.114065 GTTAGGATCGACATGGAACGAC 58.886 50.000 12.45 7.98 41.17 4.34
1992 2029 1.823828 CCGACGTTGAGTTAGGATCG 58.176 55.000 3.74 0.00 34.29 3.69
2007 2044 2.742372 ACAGCATTCCACGCCGAC 60.742 61.111 0.00 0.00 0.00 4.79
2094 2131 0.339859 TAGTGACCTCTGCCCCATCT 59.660 55.000 0.00 0.00 0.00 2.90
2118 2155 3.119137 TGAACCACTCCATGATAGACACG 60.119 47.826 0.00 0.00 0.00 4.49
2297 2334 5.796935 CCGAAACAAGTATGCAATCTGAAAG 59.203 40.000 0.00 0.00 0.00 2.62
2364 2405 6.442513 AGGATACAAATTGCAGAAGCTTAC 57.557 37.500 0.00 0.00 40.14 2.34
2379 2451 5.302059 CGTTCTCCCTAGATGAAGGATACAA 59.698 44.000 0.00 0.00 39.15 2.41
2386 2458 2.035632 AGCCGTTCTCCCTAGATGAAG 58.964 52.381 0.00 0.00 0.00 3.02
2407 2479 4.792521 TGCAAAAGGTACAAAACAGTGT 57.207 36.364 0.00 0.00 35.43 3.55
2408 2480 5.347342 TCATGCAAAAGGTACAAAACAGTG 58.653 37.500 0.00 0.00 0.00 3.66
2412 2484 5.578727 TGTGTTCATGCAAAAGGTACAAAAC 59.421 36.000 0.00 0.00 0.00 2.43
2427 2499 6.923928 AAAAGTTTTGGGAATGTGTTCATG 57.076 33.333 0.00 0.00 36.01 3.07
2448 2523 4.661222 TGTTCAAGTGGCATGGAGATAAA 58.339 39.130 0.00 0.00 0.00 1.40
2551 2628 7.391554 AGCAGTCTTTCAAGCAACAATATAGAA 59.608 33.333 0.00 0.00 0.00 2.10
2560 2637 4.756084 ATGTAGCAGTCTTTCAAGCAAC 57.244 40.909 0.00 0.00 0.00 4.17
2561 2638 5.772825 AAATGTAGCAGTCTTTCAAGCAA 57.227 34.783 0.00 0.00 0.00 3.91
2563 2640 8.642020 CAATAAAAATGTAGCAGTCTTTCAAGC 58.358 33.333 0.00 0.00 0.00 4.01
2564 2641 9.897744 TCAATAAAAATGTAGCAGTCTTTCAAG 57.102 29.630 0.00 0.00 0.00 3.02
2565 2642 9.677567 GTCAATAAAAATGTAGCAGTCTTTCAA 57.322 29.630 0.00 0.00 0.00 2.69
2567 2644 9.334693 CTGTCAATAAAAATGTAGCAGTCTTTC 57.665 33.333 0.00 0.00 0.00 2.62
2571 2648 9.846248 ATTTCTGTCAATAAAAATGTAGCAGTC 57.154 29.630 0.00 0.00 0.00 3.51
2586 2666 6.238731 CGGGCAATACACATATTTCTGTCAAT 60.239 38.462 0.00 0.00 0.00 2.57
2595 2675 6.296026 AGAATACACGGGCAATACACATATT 58.704 36.000 0.00 0.00 0.00 1.28
2598 2678 4.150897 AGAATACACGGGCAATACACAT 57.849 40.909 0.00 0.00 0.00 3.21
2601 2681 4.209307 TGAAGAATACACGGGCAATACA 57.791 40.909 0.00 0.00 0.00 2.29
2628 2992 7.718314 AGAATGCTGAAGTGATATGCATAGAAA 59.282 33.333 12.79 0.00 42.57 2.52
2651 3015 3.557054 GCAACACCACCTGTATCTGAGAA 60.557 47.826 0.00 0.00 30.51 2.87
2653 3017 2.350522 GCAACACCACCTGTATCTGAG 58.649 52.381 0.00 0.00 30.51 3.35
2978 3364 3.245052 ACACTGAGCTAAAGCCAGGATTT 60.245 43.478 8.03 8.03 43.38 2.17
2999 3385 0.398318 ACTGCCCCAGAAACAGAGAC 59.602 55.000 0.00 0.00 35.18 3.36
3081 3471 7.451501 TCATGAAAATAGCATGTTCACTCAA 57.548 32.000 0.00 0.00 42.77 3.02
3188 3578 0.612732 TTGCATTGGGCCTCTTGAGG 60.613 55.000 12.07 12.07 43.89 3.86
3212 3602 0.474184 CCTTGGTCCCTGACACAAGT 59.526 55.000 16.81 0.00 38.22 3.16
3335 3725 3.503748 CCCAGAATGCGACTTTCTTCTTT 59.496 43.478 0.00 0.00 31.11 2.52
3398 3788 6.372659 CCTAGCTGCTGTAAGAAAATCAGAAA 59.627 38.462 13.43 0.00 34.07 2.52
3401 3791 5.181748 ACCTAGCTGCTGTAAGAAAATCAG 58.818 41.667 13.43 0.00 34.07 2.90
3412 3802 0.542938 TCCACAGACCTAGCTGCTGT 60.543 55.000 13.43 1.74 43.16 4.40
3491 3881 1.354101 ACGTACTCCCATGAACCCAA 58.646 50.000 0.00 0.00 0.00 4.12
3504 3894 4.778534 TTGCAGAAGCTTAGTACGTACT 57.221 40.909 29.62 29.62 42.74 2.73
3505 3895 6.128634 ACAAATTGCAGAAGCTTAGTACGTAC 60.129 38.462 18.10 18.10 42.74 3.67
3507 3897 4.755123 ACAAATTGCAGAAGCTTAGTACGT 59.245 37.500 0.00 0.00 42.74 3.57
3510 3900 7.338710 AGGATACAAATTGCAGAAGCTTAGTA 58.661 34.615 0.00 0.00 40.14 1.82
3512 3902 6.690194 AGGATACAAATTGCAGAAGCTTAG 57.310 37.500 0.00 0.00 40.14 2.18
3513 3903 6.658816 TGAAGGATACAAATTGCAGAAGCTTA 59.341 34.615 0.00 0.00 40.14 3.09
3514 3904 5.477984 TGAAGGATACAAATTGCAGAAGCTT 59.522 36.000 0.00 0.00 40.14 3.74
3515 3905 5.012239 TGAAGGATACAAATTGCAGAAGCT 58.988 37.500 0.00 0.00 40.14 3.74
3516 3906 5.314923 TGAAGGATACAAATTGCAGAAGC 57.685 39.130 0.00 0.00 39.93 3.86
3517 3907 7.330900 AGATGAAGGATACAAATTGCAGAAG 57.669 36.000 0.00 0.00 41.41 2.85
3518 3908 7.012704 GCTAGATGAAGGATACAAATTGCAGAA 59.987 37.037 0.00 0.00 41.41 3.02
3519 3909 6.484643 GCTAGATGAAGGATACAAATTGCAGA 59.515 38.462 0.00 0.00 41.41 4.26
3520 3910 6.565435 CGCTAGATGAAGGATACAAATTGCAG 60.565 42.308 0.00 0.00 41.41 4.41
3521 3911 5.237127 CGCTAGATGAAGGATACAAATTGCA 59.763 40.000 0.00 0.00 41.41 4.08
3522 3912 5.466728 TCGCTAGATGAAGGATACAAATTGC 59.533 40.000 0.00 0.00 41.41 3.56
3523 3913 6.925718 TCTCGCTAGATGAAGGATACAAATTG 59.074 38.462 0.00 0.00 41.41 2.32
3524 3914 7.055667 TCTCGCTAGATGAAGGATACAAATT 57.944 36.000 0.00 0.00 41.41 1.82
3525 3915 6.656632 TCTCGCTAGATGAAGGATACAAAT 57.343 37.500 0.00 0.00 41.41 2.32
3526 3916 6.465439 TTCTCGCTAGATGAAGGATACAAA 57.535 37.500 0.00 0.00 41.41 2.83
3527 3917 6.450545 CATTCTCGCTAGATGAAGGATACAA 58.549 40.000 0.00 0.00 41.41 2.41
3528 3918 5.047731 CCATTCTCGCTAGATGAAGGATACA 60.048 44.000 0.00 0.00 41.41 2.29
3529 3919 5.406649 CCATTCTCGCTAGATGAAGGATAC 58.593 45.833 0.00 0.00 0.00 2.24
3530 3920 4.081972 GCCATTCTCGCTAGATGAAGGATA 60.082 45.833 0.00 0.00 0.00 2.59
3531 3921 3.306641 GCCATTCTCGCTAGATGAAGGAT 60.307 47.826 0.00 0.00 0.00 3.24
3532 3922 2.036475 GCCATTCTCGCTAGATGAAGGA 59.964 50.000 0.00 0.00 0.00 3.36
3533 3923 2.036992 AGCCATTCTCGCTAGATGAAGG 59.963 50.000 0.00 0.00 33.91 3.46
3534 3924 3.058450 CAGCCATTCTCGCTAGATGAAG 58.942 50.000 0.00 0.00 33.91 3.02
3535 3925 2.804572 GCAGCCATTCTCGCTAGATGAA 60.805 50.000 0.00 0.00 33.91 2.57
3536 3926 1.269988 GCAGCCATTCTCGCTAGATGA 60.270 52.381 0.00 0.00 33.91 2.92
3537 3927 1.146637 GCAGCCATTCTCGCTAGATG 58.853 55.000 0.00 0.00 33.91 2.90
3538 3928 0.755079 TGCAGCCATTCTCGCTAGAT 59.245 50.000 0.00 0.00 33.91 1.98
3539 3929 0.179100 GTGCAGCCATTCTCGCTAGA 60.179 55.000 0.00 0.00 33.91 2.43
3540 3930 0.179089 AGTGCAGCCATTCTCGCTAG 60.179 55.000 0.00 0.00 33.91 3.42
3541 3931 1.111277 TAGTGCAGCCATTCTCGCTA 58.889 50.000 0.00 0.00 33.91 4.26
3542 3932 0.467384 ATAGTGCAGCCATTCTCGCT 59.533 50.000 0.00 0.00 36.91 4.93
3543 3933 1.303309 AATAGTGCAGCCATTCTCGC 58.697 50.000 0.00 0.00 0.00 5.03
3544 3934 3.127548 ACAAAATAGTGCAGCCATTCTCG 59.872 43.478 0.00 0.00 0.00 4.04
3545 3935 4.708726 ACAAAATAGTGCAGCCATTCTC 57.291 40.909 0.00 0.00 0.00 2.87
3546 3936 4.399303 GGTACAAAATAGTGCAGCCATTCT 59.601 41.667 0.00 0.00 0.00 2.40
3547 3937 4.157656 TGGTACAAAATAGTGCAGCCATTC 59.842 41.667 0.00 0.00 31.92 2.67
3548 3938 4.085733 TGGTACAAAATAGTGCAGCCATT 58.914 39.130 0.00 0.00 31.92 3.16
3549 3939 3.696045 TGGTACAAAATAGTGCAGCCAT 58.304 40.909 0.00 0.00 31.92 4.40
3550 3940 3.147553 TGGTACAAAATAGTGCAGCCA 57.852 42.857 0.00 0.00 31.92 4.75
3552 3942 7.663985 GCTGGATGGTACAAAATAGTGCAGC 62.664 48.000 0.00 0.00 44.87 5.25
3565 3955 0.398318 GGGAGATGGCTGGATGGTAC 59.602 60.000 0.00 0.00 0.00 3.34
3566 3956 0.768221 GGGGAGATGGCTGGATGGTA 60.768 60.000 0.00 0.00 0.00 3.25
3567 3957 2.081161 GGGGAGATGGCTGGATGGT 61.081 63.158 0.00 0.00 0.00 3.55
3568 3958 1.432852 ATGGGGAGATGGCTGGATGG 61.433 60.000 0.00 0.00 0.00 3.51
3569 3959 0.481567 AATGGGGAGATGGCTGGATG 59.518 55.000 0.00 0.00 0.00 3.51
3570 3960 0.776176 GAATGGGGAGATGGCTGGAT 59.224 55.000 0.00 0.00 0.00 3.41
3588 3981 2.204029 AGTAAAGGCCACGGGGGA 60.204 61.111 5.47 0.00 40.01 4.81
3593 3986 1.579429 GGCAACAGTAAAGGCCACG 59.421 57.895 5.01 0.00 45.70 4.94
3594 3987 1.579429 CGGCAACAGTAAAGGCCAC 59.421 57.895 5.01 0.00 46.75 5.01
3601 3994 0.958382 GGACATGGCGGCAACAGTAA 60.958 55.000 18.31 0.00 0.00 2.24
3603 3996 2.672996 GGACATGGCGGCAACAGT 60.673 61.111 18.31 15.37 0.00 3.55
3607 4000 1.076850 ATGATGGACATGGCGGCAA 60.077 52.632 18.31 0.00 37.87 4.52
3618 4011 1.437573 GACGTCGGCTGATGATGGA 59.562 57.895 21.71 0.00 35.04 3.41
3658 4051 4.947147 GCAACAGGGGCCACGACA 62.947 66.667 4.39 0.00 0.00 4.35
3675 4095 1.406069 CCGGTTCATGAAGTCTGGGAG 60.406 57.143 8.80 0.00 0.00 4.30
3776 4336 0.907230 GGACAGAGAGGAGCTTGGGT 60.907 60.000 0.00 0.00 0.00 4.51
3916 4948 1.403249 GCTGATGTGGCATTGGTCAAC 60.403 52.381 0.00 0.00 0.00 3.18
3998 5101 7.115414 CCCTCATCTATTCTTCTGTTCCTTTT 58.885 38.462 0.00 0.00 0.00 2.27
4011 5114 3.648067 TCACATGACCCCCTCATCTATTC 59.352 47.826 0.00 0.00 37.53 1.75
4027 5355 6.083098 TGAATAAAGTTGGTGGTTCACATG 57.917 37.500 0.00 0.00 35.86 3.21
4080 5636 3.684693 GCACATGTGGCCTGTTTTT 57.315 47.368 26.55 0.00 0.00 1.94
4089 5645 5.132502 TGATATTTTAGAGGGCACATGTGG 58.867 41.667 26.55 9.24 0.00 4.17
4090 5646 6.319658 AGTTGATATTTTAGAGGGCACATGTG 59.680 38.462 21.83 21.83 0.00 3.21
4091 5647 6.319658 CAGTTGATATTTTAGAGGGCACATGT 59.680 38.462 0.00 0.00 0.00 3.21
4092 5648 6.319658 ACAGTTGATATTTTAGAGGGCACATG 59.680 38.462 0.00 0.00 0.00 3.21
4093 5649 6.319658 CACAGTTGATATTTTAGAGGGCACAT 59.680 38.462 0.00 0.00 0.00 3.21
4095 5651 5.066505 CCACAGTTGATATTTTAGAGGGCAC 59.933 44.000 0.00 0.00 0.00 5.01
4096 5652 5.192927 CCACAGTTGATATTTTAGAGGGCA 58.807 41.667 0.00 0.00 0.00 5.36
4097 5653 5.193679 ACCACAGTTGATATTTTAGAGGGC 58.806 41.667 0.00 0.00 0.00 5.19
4098 5654 6.653989 AGACCACAGTTGATATTTTAGAGGG 58.346 40.000 0.00 0.00 0.00 4.30
4099 5655 7.560368 AGAGACCACAGTTGATATTTTAGAGG 58.440 38.462 0.00 0.00 0.00 3.69
4100 5656 9.743057 CTAGAGACCACAGTTGATATTTTAGAG 57.257 37.037 0.00 0.00 0.00 2.43
4101 5657 9.256228 ACTAGAGACCACAGTTGATATTTTAGA 57.744 33.333 0.00 0.00 0.00 2.10
4102 5658 9.877178 AACTAGAGACCACAGTTGATATTTTAG 57.123 33.333 0.00 0.00 31.47 1.85
4104 5660 9.003658 CAAACTAGAGACCACAGTTGATATTTT 57.996 33.333 0.00 0.00 32.96 1.82
4105 5661 8.375506 TCAAACTAGAGACCACAGTTGATATTT 58.624 33.333 0.00 0.00 32.96 1.40
4107 5663 7.482169 TCAAACTAGAGACCACAGTTGATAT 57.518 36.000 0.00 0.00 32.96 1.63
4108 5664 6.911250 TCAAACTAGAGACCACAGTTGATA 57.089 37.500 0.00 0.00 32.96 2.15
4109 5665 5.808366 TCAAACTAGAGACCACAGTTGAT 57.192 39.130 0.00 0.00 32.96 2.57
4111 5667 4.209288 CGTTCAAACTAGAGACCACAGTTG 59.791 45.833 0.00 0.00 32.96 3.16
4112 5668 4.369182 CGTTCAAACTAGAGACCACAGTT 58.631 43.478 0.00 0.00 34.03 3.16
4114 5670 2.731976 GCGTTCAAACTAGAGACCACAG 59.268 50.000 0.00 0.00 0.00 3.66
4115 5671 2.101750 TGCGTTCAAACTAGAGACCACA 59.898 45.455 0.00 0.00 0.00 4.17
4116 5672 2.750948 TGCGTTCAAACTAGAGACCAC 58.249 47.619 0.00 0.00 0.00 4.16
4117 5673 3.462483 TTGCGTTCAAACTAGAGACCA 57.538 42.857 0.00 0.00 0.00 4.02
4118 5674 6.476243 TTTATTGCGTTCAAACTAGAGACC 57.524 37.500 0.00 0.00 35.56 3.85
4119 5675 8.950403 AAATTTATTGCGTTCAAACTAGAGAC 57.050 30.769 0.00 0.00 35.56 3.36
4120 5676 9.607285 GAAAATTTATTGCGTTCAAACTAGAGA 57.393 29.630 0.00 0.00 35.56 3.10
4121 5677 9.393249 TGAAAATTTATTGCGTTCAAACTAGAG 57.607 29.630 0.00 0.00 35.56 2.43
4123 5679 9.180678 AGTGAAAATTTATTGCGTTCAAACTAG 57.819 29.630 0.00 0.00 35.56 2.57
4126 5682 8.324567 TGAAGTGAAAATTTATTGCGTTCAAAC 58.675 29.630 0.00 0.00 35.56 2.93
4127 5683 8.412608 TGAAGTGAAAATTTATTGCGTTCAAA 57.587 26.923 0.00 0.00 35.56 2.69
4128 5684 7.993821 TGAAGTGAAAATTTATTGCGTTCAA 57.006 28.000 0.00 0.00 36.51 2.69
4129 5685 7.993821 TTGAAGTGAAAATTTATTGCGTTCA 57.006 28.000 0.00 0.00 0.00 3.18
4130 5686 9.862585 AAATTGAAGTGAAAATTTATTGCGTTC 57.137 25.926 0.00 0.00 34.92 3.95
4131 5687 9.862585 GAAATTGAAGTGAAAATTTATTGCGTT 57.137 25.926 0.00 0.00 36.40 4.84
4132 5688 9.039870 TGAAATTGAAGTGAAAATTTATTGCGT 57.960 25.926 0.00 0.00 36.40 5.24
4133 5689 9.305110 GTGAAATTGAAGTGAAAATTTATTGCG 57.695 29.630 0.00 0.00 36.40 4.85
4144 5700 7.509546 AGGAGTAGAAGTGAAATTGAAGTGAA 58.490 34.615 0.00 0.00 0.00 3.18
4146 5702 6.370166 GGAGGAGTAGAAGTGAAATTGAAGTG 59.630 42.308 0.00 0.00 0.00 3.16
4147 5703 6.468543 GGAGGAGTAGAAGTGAAATTGAAGT 58.531 40.000 0.00 0.00 0.00 3.01
4148 5704 5.877564 GGGAGGAGTAGAAGTGAAATTGAAG 59.122 44.000 0.00 0.00 0.00 3.02
4149 5705 5.548056 AGGGAGGAGTAGAAGTGAAATTGAA 59.452 40.000 0.00 0.00 0.00 2.69
4150 5706 5.094387 AGGGAGGAGTAGAAGTGAAATTGA 58.906 41.667 0.00 0.00 0.00 2.57
4153 5709 6.023603 TGTAAGGGAGGAGTAGAAGTGAAAT 58.976 40.000 0.00 0.00 0.00 2.17
4154 5710 5.399991 TGTAAGGGAGGAGTAGAAGTGAAA 58.600 41.667 0.00 0.00 0.00 2.69
4155 5711 5.006896 TGTAAGGGAGGAGTAGAAGTGAA 57.993 43.478 0.00 0.00 0.00 3.18
4156 5712 4.601084 CTGTAAGGGAGGAGTAGAAGTGA 58.399 47.826 0.00 0.00 0.00 3.41
4157 5713 4.993029 CTGTAAGGGAGGAGTAGAAGTG 57.007 50.000 0.00 0.00 0.00 3.16
4186 5742 4.636435 AAACGTGGCTCCGGGTGG 62.636 66.667 0.00 0.00 0.00 4.61
4187 5743 3.353836 CAAACGTGGCTCCGGGTG 61.354 66.667 0.00 0.00 0.00 4.61
4190 5746 2.141122 AATTGCAAACGTGGCTCCGG 62.141 55.000 1.71 0.00 0.00 5.14
4191 5747 1.003262 CAATTGCAAACGTGGCTCCG 61.003 55.000 1.71 0.00 0.00 4.63
4192 5748 0.313672 TCAATTGCAAACGTGGCTCC 59.686 50.000 1.71 0.00 0.00 4.70
4193 5749 2.132740 TTCAATTGCAAACGTGGCTC 57.867 45.000 1.71 0.00 0.00 4.70
4194 5750 2.593346 TTTCAATTGCAAACGTGGCT 57.407 40.000 1.71 0.00 0.00 4.75
4195 5751 3.876242 AATTTCAATTGCAAACGTGGC 57.124 38.095 1.71 5.57 0.00 5.01
4196 5752 6.861055 AGTAGTAATTTCAATTGCAAACGTGG 59.139 34.615 1.71 0.00 34.05 4.94
4197 5753 7.201149 CGAGTAGTAATTTCAATTGCAAACGTG 60.201 37.037 1.71 2.25 34.05 4.49
4198 5754 6.795114 CGAGTAGTAATTTCAATTGCAAACGT 59.205 34.615 1.71 0.00 34.05 3.99
4200 5756 8.502161 AACGAGTAGTAATTTCAATTGCAAAC 57.498 30.769 1.71 0.00 34.05 2.93
4201 5757 8.963130 CAAACGAGTAGTAATTTCAATTGCAAA 58.037 29.630 1.71 3.26 34.05 3.68
4202 5758 8.132362 ACAAACGAGTAGTAATTTCAATTGCAA 58.868 29.630 0.00 0.00 34.05 4.08
4203 5759 7.589587 CACAAACGAGTAGTAATTTCAATTGCA 59.410 33.333 0.00 0.00 34.05 4.08
4204 5760 7.409343 GCACAAACGAGTAGTAATTTCAATTGC 60.409 37.037 0.00 0.00 0.00 3.56
4205 5761 7.803189 AGCACAAACGAGTAGTAATTTCAATTG 59.197 33.333 0.00 0.00 0.00 2.32
4206 5762 7.871853 AGCACAAACGAGTAGTAATTTCAATT 58.128 30.769 0.00 0.00 0.00 2.32
4207 5763 7.435068 AGCACAAACGAGTAGTAATTTCAAT 57.565 32.000 0.00 0.00 0.00 2.57
4208 5764 6.854496 AGCACAAACGAGTAGTAATTTCAA 57.146 33.333 0.00 0.00 0.00 2.69
4210 5766 8.556517 AAAAAGCACAAACGAGTAGTAATTTC 57.443 30.769 0.00 0.00 0.00 2.17
4215 5771 8.277713 GTCAATAAAAAGCACAAACGAGTAGTA 58.722 33.333 0.00 0.00 0.00 1.82
4216 5772 7.130269 GTCAATAAAAAGCACAAACGAGTAGT 58.870 34.615 0.00 0.00 0.00 2.73
4217 5773 7.129622 TGTCAATAAAAAGCACAAACGAGTAG 58.870 34.615 0.00 0.00 0.00 2.57
4219 5775 5.885881 TGTCAATAAAAAGCACAAACGAGT 58.114 33.333 0.00 0.00 0.00 4.18
4220 5776 5.971202 ACTGTCAATAAAAAGCACAAACGAG 59.029 36.000 0.00 0.00 0.00 4.18
4221 5777 5.741510 CACTGTCAATAAAAAGCACAAACGA 59.258 36.000 0.00 0.00 0.00 3.85
4222 5778 5.514914 ACACTGTCAATAAAAAGCACAAACG 59.485 36.000 0.00 0.00 0.00 3.60
4223 5779 6.529829 TCACACTGTCAATAAAAAGCACAAAC 59.470 34.615 0.00 0.00 0.00 2.93
4224 5780 6.625362 TCACACTGTCAATAAAAAGCACAAA 58.375 32.000 0.00 0.00 0.00 2.83
4225 5781 6.201226 TCACACTGTCAATAAAAAGCACAA 57.799 33.333 0.00 0.00 0.00 3.33
4226 5782 5.733091 GCTCACACTGTCAATAAAAAGCACA 60.733 40.000 0.00 0.00 0.00 4.57
4227 5783 4.676924 GCTCACACTGTCAATAAAAAGCAC 59.323 41.667 0.00 0.00 0.00 4.40
4228 5784 4.261572 GGCTCACACTGTCAATAAAAAGCA 60.262 41.667 0.00 0.00 0.00 3.91
4231 5787 5.181690 GTGGCTCACACTGTCAATAAAAA 57.818 39.130 1.01 0.00 46.72 1.94
4232 5788 4.829064 GTGGCTCACACTGTCAATAAAA 57.171 40.909 1.01 0.00 46.72 1.52
4250 5806 0.248012 TACCTACGTGGCATGTGTGG 59.752 55.000 22.23 22.85 40.22 4.17
4251 5807 1.640428 CTACCTACGTGGCATGTGTG 58.360 55.000 22.23 14.51 40.22 3.82
4252 5808 0.535335 CCTACCTACGTGGCATGTGT 59.465 55.000 22.23 14.40 40.22 3.72
4253 5809 0.179084 CCCTACCTACGTGGCATGTG 60.179 60.000 22.23 9.03 40.22 3.21
4254 5810 1.968050 GCCCTACCTACGTGGCATGT 61.968 60.000 17.65 17.65 43.46 3.21
4256 5812 3.227250 GCCCTACCTACGTGGCAT 58.773 61.111 7.41 0.00 43.46 4.40
4258 5814 2.056223 TCTGCCCTACCTACGTGGC 61.056 63.158 5.43 5.43 44.27 5.01
4259 5815 1.814527 GTCTGCCCTACCTACGTGG 59.185 63.158 0.00 0.00 42.93 4.94
4260 5816 1.028330 TCGTCTGCCCTACCTACGTG 61.028 60.000 0.00 0.00 35.21 4.49
4262 5818 1.028330 TGTCGTCTGCCCTACCTACG 61.028 60.000 0.00 0.00 34.99 3.51
4264 5820 2.154567 ATTGTCGTCTGCCCTACCTA 57.845 50.000 0.00 0.00 0.00 3.08
4265 5821 2.154567 TATTGTCGTCTGCCCTACCT 57.845 50.000 0.00 0.00 0.00 3.08
4266 5822 2.934553 GTTTATTGTCGTCTGCCCTACC 59.065 50.000 0.00 0.00 0.00 3.18
4267 5823 3.858247 AGTTTATTGTCGTCTGCCCTAC 58.142 45.455 0.00 0.00 0.00 3.18
4271 5827 6.074994 CGTATCTAAGTTTATTGTCGTCTGCC 60.075 42.308 0.00 0.00 0.00 4.85
4272 5828 6.074994 CCGTATCTAAGTTTATTGTCGTCTGC 60.075 42.308 0.00 0.00 0.00 4.26
4273 5829 6.971184 ACCGTATCTAAGTTTATTGTCGTCTG 59.029 38.462 0.00 0.00 0.00 3.51
4275 5831 6.291479 GCACCGTATCTAAGTTTATTGTCGTC 60.291 42.308 0.00 0.00 0.00 4.20
4276 5832 5.517770 GCACCGTATCTAAGTTTATTGTCGT 59.482 40.000 0.00 0.00 0.00 4.34
4277 5833 5.051240 GGCACCGTATCTAAGTTTATTGTCG 60.051 44.000 0.00 0.00 0.00 4.35
4279 5835 5.736813 TGGCACCGTATCTAAGTTTATTGT 58.263 37.500 0.00 0.00 0.00 2.71
4280 5836 6.260050 ACATGGCACCGTATCTAAGTTTATTG 59.740 38.462 0.00 0.00 0.00 1.90
4281 5837 6.354130 ACATGGCACCGTATCTAAGTTTATT 58.646 36.000 0.00 0.00 0.00 1.40
4282 5838 5.925509 ACATGGCACCGTATCTAAGTTTAT 58.074 37.500 0.00 0.00 0.00 1.40
4283 5839 5.105269 TGACATGGCACCGTATCTAAGTTTA 60.105 40.000 0.00 0.00 0.00 2.01
4285 5841 3.196901 TGACATGGCACCGTATCTAAGTT 59.803 43.478 0.00 0.00 0.00 2.66
4286 5842 2.764010 TGACATGGCACCGTATCTAAGT 59.236 45.455 0.00 0.00 0.00 2.24
4288 5844 2.483013 GCTGACATGGCACCGTATCTAA 60.483 50.000 0.00 0.00 0.00 2.10
4289 5845 1.068588 GCTGACATGGCACCGTATCTA 59.931 52.381 0.00 0.00 0.00 1.98
4290 5846 0.179073 GCTGACATGGCACCGTATCT 60.179 55.000 0.00 0.00 0.00 1.98
4291 5847 0.461870 TGCTGACATGGCACCGTATC 60.462 55.000 0.00 0.00 34.56 2.24
4292 5848 0.462581 CTGCTGACATGGCACCGTAT 60.463 55.000 0.00 0.00 35.71 3.06
4293 5849 1.079197 CTGCTGACATGGCACCGTA 60.079 57.895 0.00 0.00 35.71 4.02
4294 5850 2.359107 CTGCTGACATGGCACCGT 60.359 61.111 0.00 0.00 35.71 4.83
4295 5851 2.046988 TCTGCTGACATGGCACCG 60.047 61.111 0.00 0.00 35.71 4.94
4296 5852 0.607489 AACTCTGCTGACATGGCACC 60.607 55.000 0.00 0.00 35.71 5.01
4297 5853 2.099141 TAACTCTGCTGACATGGCAC 57.901 50.000 0.00 0.00 35.71 5.01
4298 5854 2.426522 GTTAACTCTGCTGACATGGCA 58.573 47.619 0.00 0.00 38.10 4.92
4299 5855 1.394917 CGTTAACTCTGCTGACATGGC 59.605 52.381 3.71 0.00 0.00 4.40
4302 5858 3.944055 AGACGTTAACTCTGCTGACAT 57.056 42.857 3.71 0.00 0.00 3.06
4304 5860 3.184581 CCAAAGACGTTAACTCTGCTGAC 59.815 47.826 3.71 0.00 0.00 3.51
4306 5862 3.184581 GTCCAAAGACGTTAACTCTGCTG 59.815 47.826 3.71 7.08 32.18 4.41
4308 5864 3.128349 TGTCCAAAGACGTTAACTCTGC 58.872 45.455 3.71 0.00 46.74 4.26
4309 5865 4.317839 CGTTGTCCAAAGACGTTAACTCTG 60.318 45.833 3.71 0.00 46.74 3.35
4310 5866 3.800506 CGTTGTCCAAAGACGTTAACTCT 59.199 43.478 3.71 3.17 46.74 3.24
4311 5867 3.798337 TCGTTGTCCAAAGACGTTAACTC 59.202 43.478 3.71 0.84 46.74 3.01
4312 5868 3.784338 TCGTTGTCCAAAGACGTTAACT 58.216 40.909 3.71 0.00 46.74 2.24
4313 5869 3.060070 CCTCGTTGTCCAAAGACGTTAAC 60.060 47.826 0.00 0.00 46.74 2.01
4314 5870 3.125316 CCTCGTTGTCCAAAGACGTTAA 58.875 45.455 0.00 0.00 46.74 2.01
4317 5873 0.249741 CCCTCGTTGTCCAAAGACGT 60.250 55.000 0.00 0.00 46.74 4.34
4318 5874 0.249741 ACCCTCGTTGTCCAAAGACG 60.250 55.000 0.00 0.00 46.74 4.18
4319 5875 2.224113 TGTACCCTCGTTGTCCAAAGAC 60.224 50.000 0.00 0.00 43.83 3.01
4321 5877 2.140717 GTGTACCCTCGTTGTCCAAAG 58.859 52.381 0.00 0.00 0.00 2.77
4323 5879 1.121378 TGTGTACCCTCGTTGTCCAA 58.879 50.000 0.00 0.00 0.00 3.53
4325 5881 1.202557 TGTTGTGTACCCTCGTTGTCC 60.203 52.381 0.00 0.00 0.00 4.02
4326 5882 1.862827 GTGTTGTGTACCCTCGTTGTC 59.137 52.381 0.00 0.00 0.00 3.18
4327 5883 1.207570 TGTGTTGTGTACCCTCGTTGT 59.792 47.619 0.00 0.00 0.00 3.32
4330 5886 2.922740 AATGTGTTGTGTACCCTCGT 57.077 45.000 0.00 0.00 0.00 4.18
4331 5887 3.430895 GTGTAATGTGTTGTGTACCCTCG 59.569 47.826 0.00 0.00 0.00 4.63
4332 5888 4.382291 TGTGTAATGTGTTGTGTACCCTC 58.618 43.478 0.00 0.00 0.00 4.30
4334 5890 4.757657 TCATGTGTAATGTGTTGTGTACCC 59.242 41.667 0.00 0.00 0.00 3.69
4335 5891 5.933187 TCATGTGTAATGTGTTGTGTACC 57.067 39.130 0.00 0.00 0.00 3.34
4337 5893 7.148069 TGGTTTTCATGTGTAATGTGTTGTGTA 60.148 33.333 0.00 0.00 0.00 2.90
4338 5894 6.039616 GGTTTTCATGTGTAATGTGTTGTGT 58.960 36.000 0.00 0.00 0.00 3.72
4340 5896 6.214191 TGGTTTTCATGTGTAATGTGTTGT 57.786 33.333 0.00 0.00 0.00 3.32
4342 5898 6.872920 ACTTGGTTTTCATGTGTAATGTGTT 58.127 32.000 0.00 0.00 33.23 3.32
4344 5900 7.769272 AAACTTGGTTTTCATGTGTAATGTG 57.231 32.000 0.00 0.00 31.10 3.21
4345 5901 8.037758 TCAAAACTTGGTTTTCATGTGTAATGT 58.962 29.630 5.55 0.00 42.78 2.71
4346 5902 8.417780 TCAAAACTTGGTTTTCATGTGTAATG 57.582 30.769 5.55 0.00 42.78 1.90
4347 5903 9.442047 TTTCAAAACTTGGTTTTCATGTGTAAT 57.558 25.926 5.55 0.00 42.78 1.89
4349 5905 8.091449 AGTTTCAAAACTTGGTTTTCATGTGTA 58.909 29.630 2.30 0.00 46.52 2.90
4350 5906 6.934083 AGTTTCAAAACTTGGTTTTCATGTGT 59.066 30.769 2.30 0.00 46.52 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.